hg19_v1_chr1_+_198608216_198608234	2.02733	LHX3,4.p2	AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr6_+_12717036_12717051	1.92024	LHX3,4.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr16_+_12058963_12059206	1.69777	LHX3,4.p2	NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17	EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17
hg19_v1_chr10_+_91152321_91152405	1.61007	LHX3,4.p2	NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1
hg19_v1_chr2_-_31352489_31352505	1.60469	LHX3,4.p2	AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v1_chr1_-_197552304_197552360	1.59105	LHX3,4.p2	AK000061|DENND1B|163486|DENN/MADD domain containing 1B
hg19_v1_chr1_-_93342706_93342706	1.40325	LHX3,4.p2	NM_001252271|FAM69A|388650|family with sequence similarity 69, member A
hg19_v1_chr14_-_106926393_106926725	1.24509	LHX3,4.p2	BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1
hg19_v1_chr3_-_57234279_57234279	1.22995	LHX3,4.p2	NM_003865|HESX1|8820|HESX homeobox 1
hg19_v1_chr11_-_58343308_58343389	1.21425	LHX3,4.p2	BC007490|LPXN|9404|leupaxin	BC019035|LPXN|9404|leupaxin	AK313306|LPXN|9404|leupaxin	AK223165|LPXN|9404|leupaxin	AK301093|LPXN|9404|leupaxin	AF062075|LPXN|9404|leupaxin	NM_004811|LPXN|9404|leupaxin
hg19_v1_chr7_-_25268057_25268104	1.18562	LHX3,4.p2	AB040290|NPVF|64111|neuropeptide VF precursor	AF330057|NPVF|64111|neuropeptide VF precursor	AF440392|NPVF|64111|neuropeptide VF precursor	NM_022150|NPVF|64111|neuropeptide VF precursor
hg19_v1_chr5_-_1882764_1882879	1.15006	LHX3,4.p2	BC110912|IRX4|50805|iroquois homeobox 4	BC144204|IRX4|50805|iroquois homeobox 4	BC136505|IRX4|50805|iroquois homeobox 4	BC136506|IRX4|50805|iroquois homeobox 4	AF124733|IRX4|50805|iroquois homeobox 4	NM_016358|IRX4|50805|iroquois homeobox 4
hg19_v1_chr5_+_67586466_67586627	1.14268	LHX3,4.p2	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr20_-_6104056_6104271	1.09615	LHX3,4.p2	AB105105|FERMT1|55612|fermitin family member 1	NM_017671|FERMT1|55612|fermitin family member 1
hg19_v1_chr11_+_22689653_22689653	1.01934	LHX3,4.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg19_v1_chrX_-_13835012_13835171	1.00461	LHX3,4.p2	AM392527|GPM6B|2824|glycoprotein M6B	AM392754|GPM6B|2824|glycoprotein M6B	AM392867|GPM6B|2824|glycoprotein M6B	AM392943|GPM6B|2824|glycoprotein M6B	AM392957|GPM6B|2824|glycoprotein M6B	AM392968|GPM6B|2824|glycoprotein M6B	AM392974|GPM6B|2824|glycoprotein M6B	AM393048|GPM6B|2824|glycoprotein M6B	AM393215|GPM6B|2824|glycoprotein M6B	AM393570|GPM6B|2824|glycoprotein M6B	AM393576|GPM6B|2824|glycoprotein M6B	AM393741|GPM6B|2824|glycoprotein M6B	AM393770|GPM6B|2824|glycoprotein M6B	AM393783|GPM6B|2824|glycoprotein M6B	AM393822|GPM6B|2824|glycoprotein M6B	DQ891541|GPM6B|2824|glycoprotein M6B	DQ894729|GPM6B|2824|glycoprotein M6B	EU832134|GPM6B|2824|glycoprotein M6B	EU832227|GPM6B|2824|glycoprotein M6B	BC008151|GPM6B|2824|glycoprotein M6B
hg19_v1_chr13_-_99910548_99910681	0.927241	LHX3,4.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg19_v1_chr1_+_198608136_198608210	0.88008	LHX3,4.p2	NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr6_-_29527701_29527701	0.877133	LHX3,4.p2	AF123050|UBD|10537|ubiquitin D	NM_006398|UBD|10537|ubiquitin D
hg19_v1_chr1_+_198608244_198608417	0.850886	LHX3,4.p2	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C
hg19_v1_chr2_-_158300517_158300611	0.84206	LHX3,4.p2	L06633|CYTIP|9595|cytohesin 1 interacting protein	AF068836|CYTIP|9595|cytohesin 1 interacting protein	BC036449|CYTIP|9595|cytohesin 1 interacting protein	AK312753|CYTIP|9595|cytohesin 1 interacting protein	NM_004288|CYTIP|9595|cytohesin 1 interacting protein
hg19_v1_chr2_-_175462428_175462535	0.838154	LHX3,4.p2	BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1	X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg19_v1_chr8_-_110693233_110693233	0.813379	LHX3,4.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr12_-_102872329_102872428	0.808576	LHX3,4.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr12_+_54410893_54410956	0.79697	LHX3,4.p2	BC034922|HOXC5|3222|homeobox C5	BC044635|HOXC5|3222|homeobox C5	M16938|HOXC6|3223|homeobox C6	AK314829|HOXC6|3223|homeobox C6
hg19_v1_chr12_-_102512277_102512360	0.792442	LHX3,4.p2	AK026271|NUP37|79023|nucleoporin 37kDa	AF514994|NUP37|79023|nucleoporin 37kDa	BC000861|NUP37|79023|nucleoporin 37kDa	NM_024057|NUP37|79023|nucleoporin 37kDa
hg19_v1_chr5_-_88119604_88119743	0.789074	LHX3,4.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr8_-_110661007_110661131	0.781978	LHX3,4.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg19_v1_chr12_-_102874299_102874306	0.776057	LHX3,4.p2	BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr5_+_67588395_67588510	0.771377	LHX3,4.p2	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v1_chr17_-_40833840_40833844	0.760308	LHX3,4.p2	AF208237|CCR10|2826|chemokine (C-C motif) receptor 10	AY429103|CCR10|2826|chemokine (C-C motif) receptor 10	EU832758|CCR10|2826|chemokine (C-C motif) receptor 10	GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10	AF215981|CCR10|2826|chemokine (C-C motif) receptor 10	BC098132|CCR10|2826|chemokine (C-C motif) receptor 10	BC098157|CCR10|2826|chemokine (C-C motif) receptor 10	BC098304|CCR10|2826|chemokine (C-C motif) receptor 10	BC099840|CCR10|2826|chemokine (C-C motif) receptor 10	NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10
hg19_v1_chr7_+_23286420_23286476	0.753717	LHX3,4.p2	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb	BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb	BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb	BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr1_-_150738232_150738233	0.748576	LHX3,4.p2	BC002642|CTSS|1520|cathepsin S
hg19_v1_chr3_-_151034514_151034635	0.737619	LHX3,4.p2	AF237763|GPR87|53836|G protein-coupled receptor 87	BC112941|GPR87|53836|G protein-coupled receptor 87	BC117565|GPR87|53836|G protein-coupled receptor 87	AB031548|GPR87|53836|G protein-coupled receptor 87	BC132888|GPR87|53836|G protein-coupled receptor 87	BC132890|GPR87|53836|G protein-coupled receptor 87	AK027784|GPR87|53836|G protein-coupled receptor 87	NM_023915|GPR87|53836|G protein-coupled receptor 87
hg19_v1_chr12_+_28410132_28410148	0.73541	LHX3,4.p2	AY289196|CCDC91|55297|coiled-coil domain containing 91	NM_018318|CCDC91|55297|coiled-coil domain containing 91
hg19_v1_chr7_-_37024664_37024716	0.732141	LHX3,4.p2	BC064635|ELMO1|9844|engulfment and cell motility 1	NM_001039459|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr8_+_54764367_54764459	0.727835	LHX3,4.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg19_v1_chr7_+_23286384_23286385	0.726901	LHX3,4.p2	AK297051|GPNMB|10457|glycoprotein (transmembrane) nmb	X76534|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr10_+_48255223_48255428	0.714524	LHX3,4.p2	AK298761|ANXA8|653145|annexin A8	NM_001040084|ANXA8|653145|annexin A8	BC073755|ANXA8|653145|annexin A8	Z36830|ANXA8|653145|annexin A8	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	X16662|ANXA8L2|244|annexin A8-like 2	AK300158|ANXA8|653145|annexin A8	AK223149|ANXA8L2|244|annexin A8-like 2	AK296573|ANXA8|653145|annexin A8	AK300139|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8
hg19_v1_chr13_-_36050758_36050835	0.706929	LHX3,4.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg19_v1_chr3_+_63953419_63953496	0.679232	LHX3,4.p2	NM_001128149|ATXN7|6314|ataxin 7	AK310745|ATXN7|6314|ataxin 7	AK304062|ATXN7|6314|ataxin 7
hg19_v1_chr10_-_47173917_47174122	0.67423	LHX3,4.p2	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	AK296573|ANXA8|653145|annexin A8	AK300139|ANXA8|653145|annexin A8	AK300158|ANXA8|653145|annexin A8	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	Z36830|ANXA8|653145|annexin A8	BC073755|ANXA8|653145|annexin A8	NM_001040084|ANXA8|653145|annexin A8	AK298761|ANXA8|653145|annexin A8
hg19_v1_chr7_+_129015483_129015483	0.674073	LHX3,4.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr7_+_23286390_23286399	0.668151	LHX3,4.p2	AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb	AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb	AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb	BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr7_+_23286386_23286387	0.667679	LHX3,4.p2	AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb	AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb	AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr5_+_115898218_115898231	0.652042	LHX3,4.p2	
hg19_v1_chr10_+_47746919_47747111	0.648648	LHX3,4.p2	NM_001630|ANXA8L2|244|annexin A8-like 2	BC008813|ANXA8L2|244|annexin A8-like 2	BC073755|ANXA8|653145|annexin A8	AK313626|ANXA8L2|244|annexin A8-like 2	X16662|ANXA8L2|244|annexin A8-like 2	AK300191|ANXA8L2|244|annexin A8-like 2	AK223149|ANXA8L2|244|annexin A8-like 2
hg19_v1_chrX_+_37639246_37639294	0.629762	LHX3,4.p2	NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide	AK289753|CYBB|1536|cytochrome b-245, beta polypeptide	BC032720|CYBB|1536|cytochrome b-245, beta polypeptide
hg19_v1_chr8_+_98703361_98703396	0.605111	LHX3,4.p2	AK308030|MTDH|92140|metadherin
hg19_v1_chr8_-_102803196_102803204	0.601182	LHX3,4.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg19_v1_chr7_-_7758237_7758237	0.593504	LHX3,4.p2	BC009868|RPA3|6119|replication protein A3, 14kDa	NM_002947|RPA3|6119|replication protein A3, 14kDa
hg19_v1_chrX_-_72434623_72434633	0.590931	LHX3,4.p2	BC026325|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg19_v1_chr9_+_118916069_118916071	0.572704	LHX3,4.p2	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1
hg19_v1_chr1_-_150738292_150738432	0.571779	LHX3,4.p2	AK226095|CTSS|1520|cathepsin S	M90696|CTSS|1520|cathepsin S	NM_001199739|CTSS|1520|cathepsin S	NM_004079|CTSS|1520|cathepsin S
hg19_v1_chr20_-_18477811_18477886	0.571035	LHX3,4.p2	EU446767|RBBP9|10741|retinoblastoma binding protein 9	AL832411|RBBP9|10741|retinoblastoma binding protein 9	AF237576|RBBP9|10741|retinoblastoma binding protein 9	BC020627|RBBP9|10741|retinoblastoma binding protein 9	BC015938|RBBP9|10741|retinoblastoma binding protein 9	NM_006606|RBBP9|10741|retinoblastoma binding protein 9
hg19_v1_chr6_-_33041266_33041470	0.569921	LHX3,4.p2	X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1
hg19_v1_chrX_-_13835313_13835318	0.565487	LHX3,4.p2	NM_001001995|GPM6B|2824|glycoprotein M6B	NM_001001996|GPM6B|2824|glycoprotein M6B	NM_005278|GPM6B|2824|glycoprotein M6B
hg19_v1_chr4_-_176733901_176733911	0.55608	LHX3,4.p2	BC044612|GPM6A|2823|glycoprotein M6A	BC053954|GPM6A|2823|glycoprotein M6A
hg19_v1_chr2_-_216003068_216003150	0.548621	LHX3,4.p2	BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12
hg19_v1_chr3_-_126327397_126327397	0.548119	LHX3,4.p2	AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor	NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor
hg19_v1_chr12_-_53600999_53601045	0.547537	LHX3,4.p2	M68892|ITGB7|3695|integrin, beta 7	NM_000889|ITGB7|3695|integrin, beta 7	S80335|ITGB7|3695|integrin, beta 7	AK298239|ITGB7|3695|integrin, beta 7	AK301523|ITGB7|3695|integrin, beta 7	AK311703|ITGB7|3695|integrin, beta 7
hg19_v1_chr12_-_53601051_53601093	0.542483	LHX3,4.p2	AK300960|ITGB7|3695|integrin, beta 7
hg19_v1_chr18_+_29027731_29027757	0.538952	LHX3,4.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg19_v1_chr14_+_67831484_67831578	0.531116	LHX3,4.p2	DQ892151|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	DQ895347|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr3_-_141747434_141747506	0.523433	LHX3,4.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v1_chrX_-_107682600_107682726	0.522243	LHX3,4.p2	BT007228|COL4A6|1288|collagen, type IV, alpha 6	L22763|COL4A6|1288|collagen, type IV, alpha 6	U04845|COL4A6|1288|collagen, type IV, alpha 6	NM_001847|COL4A6|1288|collagen, type IV, alpha 6	BC005305|COL4A6|1288|collagen, type IV, alpha 6
hg19_v1_chr22_+_40297183_40297312	0.521381	LHX3,4.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr1_-_114414245_114414374	0.520627	LHX3,4.p2	JN084012|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg19_v1_chrX_-_72434656_72434659	0.516511	LHX3,4.p2	AF136178|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg19_v1_chrX_-_72434667_72434709	0.514934	LHX3,4.p2	AK291297|NAP1L2|4674|nucleosome assembly protein 1-like 2	AK303676|NAP1L2|4674|nucleosome assembly protein 1-like 2	AB027013|NAP1L2|4674|nucleosome assembly protein 1-like 2	AK316569|NAP1L2|4674|nucleosome assembly protein 1-like 2	NM_021963|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg19_v1_chr7_+_26400503_26400554	0.506789	LHX3,4.p2	NM_001199837|SNX10|29887|sorting nexin 10	AK307905|SNX10|29887|sorting nexin 10
hg19_v1_chr11_-_115088628_115088669	0.500104	LHX3,4.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg19_v1_chr1_+_111413820_111413838	0.499267	LHX3,4.p2	NM_001040033|CD53|963|CD53 molecule	BC035456|CD53|963|CD53 molecule
hg19_v1_chr8_-_102803178_102803188	0.495625	LHX3,4.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg19_v1_chr7_+_77469446_77469572	0.485507	LHX3,4.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg19_v1_chr22_+_40297085_40297163	0.479975	LHX3,4.p2	AY069959|GRAP2|9402|GRB2-related adaptor protein 2	NM_004810|GRAP2|9402|GRB2-related adaptor protein 2	AK303332|GRAP2|9402|GRB2-related adaptor protein 2	AK303512|GRAP2|9402|GRB2-related adaptor protein 2	AF236119|GRAP2|9402|GRB2-related adaptor protein 2	AJ011736|GRAP2|9402|GRB2-related adaptor protein 2	BC025692|GRAP2|9402|GRB2-related adaptor protein 2	AF042380|GRAP2|9402|GRB2-related adaptor protein 2	AF102694|GRAP2|9402|GRB2-related adaptor protein 2
hg19_v1_chr12_-_102874373_102874391	0.479355	LHX3,4.p2	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr14_-_106733392_106733641	0.476346	LHX3,4.p2	BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr1_+_168250277_168250328	0.469404	LHX3,4.p2	AJ010277|TBX19|9095|T-box 19	NM_005149|TBX19|9095|T-box 19	BC093664|TBX19|9095|T-box 19	BC093666|TBX19|9095|T-box 19	EU446671|TBX19|9095|T-box 19
hg19_v1_chr1_-_150738255_150738281	0.469148	LHX3,4.p2	AK301472|CTSS|1520|cathepsin S	AK314482|CTSS|1520|cathepsin S
hg19_v1_chr1_+_174844655_174844683	0.468284	LHX3,4.p2	NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like	BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like
hg19_v1_chr4_-_176733413_176733470	0.466878	LHX3,4.p2	BC010461|GPM6A|2823|glycoprotein M6A	BC022508|GPM6A|2823|glycoprotein M6A	D49958|GPM6A|2823|glycoprotein M6A
hg19_v1_chrX_-_13835187_13835203	0.466703	LHX3,4.p2	AK299675|GPM6B|2824|glycoprotein M6B	BC047295|GPM6B|2824|glycoprotein M6B
hg19_v1_chr12_+_8332789_8332864	0.458799	LHX3,4.p2	AK096301|FAM66C|440078|family with sequence similarity 66, member C	BC048994|FAM66C|440078|family with sequence similarity 66, member C	BC034777|FAM66C|440078|family with sequence similarity 66, member C
hg19_v1_chr8_-_80993009_80993050	0.452855	LHX3,4.p2	AF202897|TPD52|7163|tumor protein D52	EF152584|TPD52|7163|tumor protein D52	NM_001025252|TPD52|7163|tumor protein D52	GQ499324|TPD52|7163|tumor protein D52	GQ499325|TPD52|7163|tumor protein D52	GQ499326|TPD52|7163|tumor protein D52	GQ499327|TPD52|7163|tumor protein D52	GQ499328|TPD52|7163|tumor protein D52
hg19_v1_chr2_+_162272800_162272843	0.439846	LHX3,4.p2	AK297438|TBR1|10716|T-box, brain, 1	AK312567|TBR1|10716|T-box, brain, 1	AK226050|TBR1|10716|T-box, brain, 1	BC029289|TBR1|10716|T-box, brain, 1
hg19_v1_chr14_-_106471439_106471876	0.43887	LHX3,4.p2	BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640724|IGHM|3507|immunoglobulin heavy constant mu	AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1
hg19_v1_chr12_-_102874321_102874323	0.438338	LHX3,4.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chrX_-_110655384_110655459	0.436474	LHX3,4.p2	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg19_v1_chr3_+_178276487_178276617	0.424679	LHX3,4.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr4_-_103245468_103245468	0.424509	LHX3,4.p2	AK027652|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135148|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg19_v1_chr4_-_57547845_57547871	0.423228	LHX3,4.p2	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg19_v1_chr18_+_21269528_21269647	0.421307	LHX3,4.p2	BC093406|LAMA3|3909|laminin, alpha 3	NM_001127717|LAMA3|3909|laminin, alpha 3	NM_198129|LAMA3|3909|laminin, alpha 3	AY327115|LAMA3|3909|laminin, alpha 3	AY327116|LAMA3|3909|laminin, alpha 3
hg19_v1_chrX_+_99839789_99840014	0.415042	LHX3,4.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg19_v1_chr6_-_169654047_169654181	0.414651	LHX3,4.p2	L12350|THBS2|7058|thrombospondin 2	NM_003247|THBS2|7058|thrombospondin 2	AK292429|THBS2|7058|thrombospondin 2
hg19_v1_chr2_+_162272892_162272921	0.413894	LHX3,4.p2	U49250|TBR1|10716|T-box, brain, 1	HQ258587|TBR1|10716|T-box, brain, 1
hg19_v1_chr3_+_98250742_98250877	0.412741	LHX3,4.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg19_v1_chr12_-_53994783_53994804	0.403434	LHX3,4.p2	X57197|ATF7|11016|activating transcription factor 7	NM_001130059|ATF7|11016|activating transcription factor 7
hg19_v1_chr12_+_54422193_54422305	0.402663	LHX3,4.p2	NM_004503|HOXC6|3223|homeobox C6	S82986|HOXC6|3223|homeobox C6	BC074844|HOXC6|3223|homeobox C6	BC074845|HOXC6|3223|homeobox C6	CR456954|HOXC6|3223|homeobox C6
hg19_v1_chr14_-_107013474_107013478	0.39939	LHX3,4.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chrX_+_37639306_37639325	0.399225	LHX3,4.p2	AK304033|CYBB|1536|cytochrome b-245, beta polypeptide	AK301491|CYBB|1536|cytochrome b-245, beta polypeptide	AK312929|CYBB|1536|cytochrome b-245, beta polypeptide	AK301476|CYBB|1536|cytochrome b-245, beta polypeptide	X04011|CYBB|1536|cytochrome b-245, beta polypeptide	DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide	DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide
hg19_v1_chr12_-_54653317_54653332	0.39799	LHX3,4.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg19_v1_chr15_+_94899163_94899455	0.394411	LHX3,4.p2	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2	BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2	BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2	AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2
hg19_v1_chr3_-_9291251_9291385	0.392143	LHX3,4.p2	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3
hg19_v1_chr20_-_52199635_52199635	0.390786	LHX3,4.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg19_v1_chr11_-_102576444_102576467	0.377479	LHX3,4.p2	AF195192|MMP27|64066|matrix metallopeptidase 27	AY358752|MMP27|64066|matrix metallopeptidase 27	NM_022122|MMP27|64066|matrix metallopeptidase 27
hg19_v1_chr12_-_102874340_102874344	0.377003	LHX3,4.p2	M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr3_-_141719188_141719228	0.376856	LHX3,4.p2	AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v1_chr15_+_81489218_81489219	0.373351	LHX3,4.p2	AK124725|IL16|3603|interleukin 16	NM_001172128|IL16|3603|interleukin 16	AK124565|IL16|3603|interleukin 16	AK131530|IL16|3603|interleukin 16
hg19_v1_chr6_-_22297729_22297729	0.373121	LHX3,4.p2	BC015850|PRL|5617|prolactin	NM_000948|PRL|5617|prolactin
hg19_v1_chr6_-_136788012_136788012	0.371863	LHX3,4.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg19_v1_chr5_-_22853435_22853458	0.371163	LHX3,4.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr10_+_35426709_35426763	0.364968	LHX3,4.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg19_v1_chr16_+_86612114_86612114	0.361733	LHX3,4.p2	BC100027|FOXL1|2300|forkhead box L1	NM_005250|FOXL1|2300|forkhead box L1
hg19_v1_chr14_+_102276279_102276339	0.359664	LHX3,4.p2	AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma
hg19_v1_chr15_+_34261088_34261088	0.35942	LHX3,4.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg19_v1_chrX_+_24073071_24073085	0.357048	LHX3,4.p2	AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v1_chr12_-_54653369_54653373	0.356355	LHX3,4.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg19_v1_chrX_+_70765479_70765566	0.354215	LHX3,4.p2	AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg19_v1_chr2_-_122159140_122159171	0.353505	LHX3,4.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg19_v1_chr2_+_68961912_68962234	0.353468	LHX3,4.p2	NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25	NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25	AK297056|ARHGAP25|9938|Rho GTPase activating protein 25	AK310742|ARHGAP25|9938|Rho GTPase activating protein 25	AK290396|ARHGAP25|9938|Rho GTPase activating protein 25
hg19_v1_chr12_-_102874158_102874273	0.351451	LHX3,4.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg19_v1_chr1_+_100316530_100316598	0.349702	LHX3,4.p2	NM_000646|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84011|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	AB208867|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v1_chr8_-_29207795_29208346	0.346773	LHX3,4.p2	EU831463|DUSP4|1846|dual specificity phosphatase 4	EU831550|DUSP4|1846|dual specificity phosphatase 4	S80632|DUSP4|1846|dual specificity phosphatase 4	U48807|DUSP4|1846|dual specificity phosphatase 4	BC002671|DUSP4|1846|dual specificity phosphatase 4	U21108|DUSP4|1846|dual specificity phosphatase 4	BC014565|DUSP4|1846|dual specificity phosphatase 4	AK314820|DUSP4|1846|dual specificity phosphatase 4	NM_001394|DUSP4|1846|dual specificity phosphatase 4
hg19_v1_chr1_-_92952429_92952472	0.344953	LHX3,4.p2	U67369|GFI1|2672|growth factor independent 1 transcription repressor	NM_005263|GFI1|2672|growth factor independent 1 transcription repressor
hg19_v1_chr6_-_87804773_87804864	0.344932	LHX3,4.p2	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide	AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide	BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide	BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide	BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide
hg19_v1_chr20_-_7921068_7921136	0.339004	LHX3,4.p2	AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1	AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v1_chr2_-_216946463_216946625	0.337175	LHX3,4.p2	EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase	NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase
hg19_v1_chr7_+_23286277_23286315	0.336372	LHX3,4.p2	AK304671|GPNMB|10457|glycoprotein (transmembrane) nmb	NM_001005340|GPNMB|10457|glycoprotein (transmembrane) nmb	NM_002510|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr3_+_130569368_130569444	0.334914	LHX3,4.p2	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1
hg19_v1_chr13_+_24463006_24463027	0.329783	LHX3,4.p2	BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)
hg19_v1_chr8_+_132991171_132991247	0.326423	LHX3,4.p2	BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)
hg19_v1_chr4_-_116034932_116035031	0.322617	LHX3,4.p2	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
hg19_v1_chr8_-_102803438_102803438	0.321475	LHX3,4.p2	NM_032041|NCALD|83988|neurocalcin delta
hg19_v1_chr3_-_79817058_79817058	0.317112	LHX3,4.p2	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v1_chr2_+_234637772_234637772	0.316344	LHX3,4.p2	AY435138|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3	NM_019093|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3
hg19_v1_chr2_+_162272619_162272744	0.315199	LHX3,4.p2	NM_006593|TBR1|10716|T-box, brain, 1	BC104844|TBR1|10716|T-box, brain, 1	BC113418|TBR1|10716|T-box, brain, 1
hg19_v1_chr3_+_141043054_141043058	0.312758	LHX3,4.p2	BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38	NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38
hg19_v1_chrX_+_107288199_107288320	0.311364	LHX3,4.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg19_v1_chr12_-_26277807_26278036	0.306908	LHX3,4.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg19_v1_chr1_+_158801105_158801167	0.306052	LHX3,4.p2	BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen	BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen	AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen	AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen	M81750|MNDA|4332|myeloid cell nuclear differentiation antigen	NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen
hg19_v1_chr6_+_73076431_73076484	0.301245	LHX3,4.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr11_+_99426872_99426875	0.300371	LHX3,4.p2	AB013802|CNTN5|53942|contactin 5	AB013803|CNTN5|53942|contactin 5	NM_175566|CNTN5|53942|contactin 5
hg19_v1_chr6_-_24877453_24877582	0.300105	LHX3,4.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg19_v1_chr14_-_106539099_106539580	0.299888	LHX3,4.p2	BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1	BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg19_v1_chr6_-_32908583_32908846	0.29914	LHX3,4.p2	CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta
hg19_v1_chr3_+_69812961_69812961	0.293851	LHX3,4.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr4_-_76944585_76944688	0.291755	LHX3,4.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg19_v1_chr1_+_79115476_79115521	0.287952	LHX3,4.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44
hg19_v1_chr4_-_120243257_120243315	0.286206	LHX3,4.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg19_v1_chr2_-_200213802_200213898	0.284677	LHX3,4.p2	AK025127|SATB2|23314|SATB homeobox 2
hg19_v1_chr10_+_18549583_18549697	0.284136	LHX3,4.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr13_-_41593405_41593482	0.2819	LHX3,4.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg19_v1_chr3_+_142342265_142342343	0.281338	LHX3,4.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg19_v1_chr3_-_124930192_124930242	0.276651	LHX3,4.p2	AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg19_v1_chr3_-_167191808_167191833	0.276534	LHX3,4.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v1_chr3_-_119582422_119582427	0.274236	LHX3,4.p2	AY123976|GSK3B|2932|glycogen synthase kinase 3 beta
hg19_v1_chr3_-_105421044_105421065	0.273883	LHX3,4.p2	CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b
hg19_v1_chr12_+_25205488_25205673	0.273657	LHX3,4.p2	BC029391|LRMP|4033|lymphoid-restricted membrane protein	AK303103|LRMP|4033|lymphoid-restricted membrane protein	AK303256|LRMP|4033|lymphoid-restricted membrane protein	BC126417|LRMP|4033|lymphoid-restricted membrane protein	BC144164|LRMP|4033|lymphoid-restricted membrane protein	BC144165|LRMP|4033|lymphoid-restricted membrane protein	BC144170|LRMP|4033|lymphoid-restricted membrane protein
hg19_v1_chrX_+_24073060_24073068	0.273225	LHX3,4.p2	BC019906|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	NM_001415|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v1_chr8_-_57026540_57026540	0.272165	LHX3,4.p2	BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog	NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog
hg19_v1_chr18_+_29769986_29770008	0.2713	LHX3,4.p2	AY695931|MEP1B|4225|meprin A, beta	NM_005925|MEP1B|4225|meprin A, beta	X81333|MEP1B|4225|meprin A, beta	BC136559|MEP1B|4225|meprin A, beta	BC144244|MEP1B|4225|meprin A, beta
hg19_v1_chr7_+_28452143_28452143	0.271146	LHX3,4.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr2_+_102979096_102979120	0.270399	LHX3,4.p2	BC069575|IL18R1|8809|interleukin 18 receptor 1	BC093975|IL18R1|8809|interleukin 18 receptor 1	BC093977|IL18R1|8809|interleukin 18 receptor 1	BC143403|IL18R1|8809|interleukin 18 receptor 1	BC143405|IL18R1|8809|interleukin 18 receptor 1	NM_003855|IL18R1|8809|interleukin 18 receptor 1	U43672|IL18R1|8809|interleukin 18 receptor 1	AY192162|IL18R1|8809|interleukin 18 receptor 1
hg19_v1_chr1_+_159259503_159259503	0.268244	LHX3,4.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg19_v1_chr17_-_39092714_39093086	0.26824	LHX3,4.p2	AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)	DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)	AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr12_+_14538232_14538312	0.267643	LHX3,4.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg19_v1_chr4_+_88571453_88571458	0.266961	LHX3,4.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg19_v1_chr7_-_27166638_27166638	0.263053	LHX3,4.p2	AK056567|HOXA3|3200|homeobox A3	NM_153631|HOXA3|3200|homeobox A3
hg19_v1_chr7_+_90339146_90339175	0.262971	LHX3,4.p2	AK295086|CDK14|5218|cyclin-dependent kinase 14	AK296406|CDK14|5218|cyclin-dependent kinase 14	AK307484|CDK14|5218|cyclin-dependent kinase 14	AK316026|CDK14|5218|cyclin-dependent kinase 14
hg19_v1_chrX_-_24690740_24690978	0.262006	LHX3,4.p2	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg19_v1_chr5_+_156696351_156696361	0.254819	LHX3,4.p2	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg19_v1_chr12_-_46633551_46633675	0.254442	LHX3,4.p2	AK074851|SLC38A1|81539|solute carrier family 38, member 1	DQ891017|SLC38A1|81539|solute carrier family 38, member 1	EU176550|SLC38A1|81539|solute carrier family 38, member 1	AK074949|SLC38A1|81539|solute carrier family 38, member 1	AK313731|SLC38A1|81539|solute carrier family 38, member 1
hg19_v1_chr14_+_102276125_102276241	0.254261	LHX3,4.p2	NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma
hg19_v1_chr6_+_31583766_31583888	0.254116	LHX3,4.p2	NM_032955|AIF1|199|allograft inflammatory factor 1	EF070982|AIF1|199|allograft inflammatory factor 1	AF299327|AIF1|199|allograft inflammatory factor 1	CR542153|AIF1|199|allograft inflammatory factor 1
hg19_v1_chr18_-_3845295_3845366	0.250902	LHX3,4.p2	AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr4_-_46911223_46911251	0.249976	LHX3,4.p2	BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2	BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2	NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2
hg19_v1_chr9_-_112191105_112191322	0.248838	LHX3,4.p2	AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3
hg19_v1_chr7_+_96745904_96745904	0.247245	LHX3,4.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg19_v1_chr12_-_10282680_10282867	0.242287	LHX3,4.p2	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A	AF400596|CLEC7A|64581|C-type lectin domain family 7, member A	AF400597|CLEC7A|64581|C-type lectin domain family 7, member A	AF400598|CLEC7A|64581|C-type lectin domain family 7, member A	AF400599|CLEC7A|64581|C-type lectin domain family 7, member A	AF400600|CLEC7A|64581|C-type lectin domain family 7, member A	AF400601|CLEC7A|64581|C-type lectin domain family 7, member A	AF400602|CLEC7A|64581|C-type lectin domain family 7, member A	AY026769|CLEC7A|64581|C-type lectin domain family 7, member A	AY026770|CLEC7A|64581|C-type lectin domain family 7, member A	AY026771|CLEC7A|64581|C-type lectin domain family 7, member A	AF313469|CLEC7A|64581|C-type lectin domain family 7, member A	BC013385|CLEC7A|64581|C-type lectin domain family 7, member A	AY009090|CLEC7A|64581|C-type lectin domain family 7, member A	AK297028|CLEC7A|64581|C-type lectin domain family 7, member A	BC093829|CLEC7A|64581|C-type lectin domain family 7, member A	BC093831|CLEC7A|64581|C-type lectin domain family 7, member A	BC071746|CLEC7A|64581|C-type lectin domain family 7, member A	AK298679|CLEC7A|64581|C-type lectin domain family 7, member A	AK298724|CLEC7A|64581|C-type lectin domain family 7, member A	AK313247|CLEC7A|64581|C-type lectin domain family 7, member A	CR749536|CLEC7A|64581|C-type lectin domain family 7, member A	AK295108|CLEC7A|64581|C-type lectin domain family 7, member A	AF313468|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A	AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A	AY359002|CLEC7A|64581|C-type lectin domain family 7, member A	AK294111|CLEC7A|64581|C-type lectin domain family 7, member A	NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A	NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A
hg19_v1_chr8_+_22844918_22844929	0.235872	LHX3,4.p2	BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2	NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2
hg19_v1_chr3_-_12941547_12941670	0.234837	LHX3,4.p2	BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1	AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1
hg19_v1_chr14_-_64194692_64194807	0.234534	LHX3,4.p2	AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1
hg19_v1_chr8_-_101315457_101315486	0.233615	LHX3,4.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg19_v1_chr1_+_153003677_153003680	0.233607	LHX3,4.p2	M19888|SPRR1B|6699|small proline-rich protein 1B	BC056240|SPRR1B|6699|small proline-rich protein 1B	M21300|SPRR1B|6699|small proline-rich protein 1B	NM_003125|SPRR1B|6699|small proline-rich protein 1B	M21301|SPRR1B|6699|small proline-rich protein 1B
hg19_v1_chrX_+_49091926_49091929	0.23357	LHX3,4.p2	NM_014008|CCDC22|28952|coiled-coil domain containing 22
hg19_v1_chr21_-_31538970_31539043	0.232549	LHX3,4.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg19_v1_chr9_+_12693385_12693466	0.22968	LHX3,4.p2	NM_000550|TYRP1|7306|tyrosinase-related protein 1	X51420|TYRP1|7306|tyrosinase-related protein 1	BC052608|TYRP1|7306|tyrosinase-related protein 1
hg19_v1_chr2_-_191872322_191872382	0.228676	LHX3,4.p2	BC141921|STAT1|6772|signal transducer and activator of transcription 1, 91kDa
hg19_v1_chr5_+_59784004_59784077	0.228182	LHX3,4.p2	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v1_chr15_+_52201590_52201630	0.227674	LHX3,4.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg19_v1_chr7_-_122839999_122840024	0.22734	LHX3,4.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg19_v1_chr3_+_119316694_119316760	0.226425	LHX3,4.p2	NM_001206960|PLA1A|51365|phospholipase A1 member A	NM_001206961|PLA1A|51365|phospholipase A1 member A	NM_015900|PLA1A|51365|phospholipase A1 member A	AK301880|PLA1A|51365|phospholipase A1 member A	AK222705|PLA1A|51365|phospholipase A1 member A	AK313519|PLA1A|51365|phospholipase A1 member A	BC035347|PLA1A|51365|phospholipase A1 member A	BC047703|PLA1A|51365|phospholipase A1 member A	U37591|PLA1A|51365|phospholipase A1 member A	AF035268|PLA1A|51365|phospholipase A1 member A	AF035269|PLA1A|51365|phospholipase A1 member A
hg19_v1_chrX_-_114252132_114252216	0.225379	LHX3,4.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg19_v1_chrX_-_118726852_118727112	0.224911	LHX3,4.p2	EF165090|NKRF|55922|NFKB repressing factor	EF165091|NKRF|55922|NFKB repressing factor	EF165093|NKRF|55922|NFKB repressing factor	AJ011812|NKRF|55922|NFKB repressing factor	EF158333|NKRF|55922|NFKB repressing factor	EF216688|NKRF|55922|NFKB repressing factor	EF216689|NKRF|55922|NFKB repressing factor	NM_001173488|NKRF|55922|NFKB repressing factor
hg19_v1_chr1_-_154578775_154578775	0.224187	LHX3,4.p2	NM_001193495|ADAR|103|adenosine deaminase, RNA-specific	X79448|ADAR|103|adenosine deaminase, RNA-specific
hg19_v1_chr17_-_39093671_39093835	0.221767	LHX3,4.p2	BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)	AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)	AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)	NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)
hg19_v1_chr3_+_39424766_39425215	0.217863	LHX3,4.p2	NM_017875|SLC25A38|54977|solute carrier family 25, member 38	AK000558|SLC25A38|54977|solute carrier family 25, member 38	AK225388|SLC25A38|54977|solute carrier family 25, member 38	BC013194|SLC25A38|54977|solute carrier family 25, member 38	CR457242|SLC25A38|54977|solute carrier family 25, member 38
hg19_v1_chr20_-_34025955_34026026	0.21708	LHX3,4.p2	AB593125|GDF5|8200|growth differentiation factor 5	U13660|GDF5|8200|growth differentiation factor 5	NM_000557|GDF5|8200|growth differentiation factor 5
hg19_v1_chr3_-_111314181_111314181	0.216849	LHX3,4.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg19_v1_chr10_+_91498724_91498811	0.215952	LHX3,4.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg19_v1_chr3_-_54961961_54962071	0.213181	LHX3,4.p2	BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1
hg19_v1_chr10_+_102222797_102222814	0.213072	LHX3,4.p2	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B	NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B	AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B
hg19_v1_chr3_-_164796275_164796282	0.211214	LHX3,4.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg19_v1_chr14_-_106552313_106552810	0.211151	LHX3,4.p2	BC021276|IGHD|3495|immunoglobulin heavy constant delta	BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK128625|IGHD|3495|immunoglobulin heavy constant delta	AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr14_-_21567069_21567172	0.20889	LHX3,4.p2	AK225811|ZNF219|51222|zinc finger protein 219	AK290700|ZNF219|51222|zinc finger protein 219	NM_001101672|ZNF219|51222|zinc finger protein 219
hg19_v1_chr10_-_48806862_48806984	0.208304	LHX3,4.p2	AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A
hg19_v1_chr19_+_30433111_30433453	0.207192	LHX3,4.p2	NM_003796|URI1|8725|URI1, prefoldin-like chaperone	AK226173|URI1|8725|URI1, prefoldin-like chaperone	AF091095|URI1|8725|URI1, prefoldin-like chaperone	AK292170|URI1|8725|URI1, prefoldin-like chaperone	BC067259|URI1|8725|URI1, prefoldin-like chaperone	AK314313|URI1|8725|URI1, prefoldin-like chaperone	AK001437|URI1|8725|URI1, prefoldin-like chaperone	NM_134447|URI1|8725|URI1, prefoldin-like chaperone
hg19_v1_chr10_-_61900659_61900773	0.206699	LHX3,4.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v1_chr3_-_12586962_12586962	0.198184	LHX3,4.p2	NM_001195279|LOC100129480|100129480|uncharacterized LOC100129480
hg19_v1_chr3_-_101039403_101039441	0.196927	LHX3,4.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg19_v1_chr14_+_70236266_70236309	0.196673	LHX3,4.p2	AF070562|SRSF5|6430|serine/arginine-rich splicing factor 5
hg19_v1_chr15_-_60919642_60919728	0.196129	LHX3,4.p2	U04899|RORA|6095|RAR-related orphan receptor A	U04898|RORA|6095|RAR-related orphan receptor A	NM_002943|RORA|6095|RAR-related orphan receptor A	NM_134260|RORA|6095|RAR-related orphan receptor A
hg19_v1_chrX_-_13835213_13835231	0.194872	LHX3,4.p2	AK095657|GPM6B|2824|glycoprotein M6B
hg19_v1_chrX_+_78200828_78200917	0.19465	LHX3,4.p2	NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10
hg19_v1_chr1_+_50574589_50574594	0.194014	LHX3,4.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr4_+_78432905_78432906	0.192674	LHX3,4.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg19_v1_chr4_+_69313166_69313207	0.191641	LHX3,4.p2	AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E	NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E	AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E	AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E	AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E
hg19_v1_chr5_+_140235594_140235633	0.188869	LHX3,4.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	HQ258585|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg19_v1_chrX_-_154250769_154251027	0.188606	LHX3,4.p2	FN811132|F8|2157|coagulation factor VIII, procoagulant component	AX746360|F8|2157|coagulation factor VIII, procoagulant component	X01179|F8|2157|coagulation factor VIII, procoagulant component	K01740|F8|2157|coagulation factor VIII, procoagulant component	AK292902|F8|2157|coagulation factor VIII, procoagulant component	M14113|F8|2157|coagulation factor VIII, procoagulant component	NM_000132|F8|2157|coagulation factor VIII, procoagulant component	AK307726|F8|2157|coagulation factor VIII, procoagulant component
hg19_v1_chr3_+_178254223_178254223	0.187782	LHX3,4.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v1_chr7_+_141695678_141695706	0.187319	LHX3,4.p2	AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)
hg19_v1_chr8_+_104831415_104831735	0.187238	LHX3,4.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg19_v1_chr13_+_78109808_78109894	0.1869	LHX3,4.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg19_v1_chr5_-_160279045_160279218	0.185207	LHX3,4.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg19_v1_chr6_-_56507585_56507693	0.184383	LHX3,4.p2	AF400226|DST|667|dystonin	AF400227|DST|667|dystonin	M69225|DST|667|dystonin	BC065536|DST|667|dystonin	L11690|DST|667|dystonin	NM_001723|DST|667|dystonin	NM_015548|DST|667|dystonin
hg19_v1_chr1_-_205744543_205744614	0.183672	LHX3,4.p2	BC002585|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	BX647960|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK308359|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK311085|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK313000|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135662|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135663|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135664|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_003929|RAB7L1|8934|RAB7, member RAS oncogene family-like 1
hg19_v1_chr15_+_74421986_74421999	0.18318	LHX3,4.p2	NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2
hg19_v1_chr18_-_13915534_13915538	0.179786	LHX3,4.p2	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)	AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v1_chr3_+_136649316_136649358	0.178517	LHX3,4.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg19_v1_chr6_-_31088195_31088251	0.176286	LHX3,4.p2	DQ891583|CDSN|1041|corneodesmosin	DQ894777|CDSN|1041|corneodesmosin	BC031993|CDSN|1041|corneodesmosin	AF030130|CDSN|1041|corneodesmosin	L20815|CDSN|1041|corneodesmosin	AK292636|CDSN|1041|corneodesmosin	NM_001264|CDSN|1041|corneodesmosin
hg19_v1_chr6_-_26235160_26235241	0.176076	LHX3,4.p2	EU446961|HIST1H1D|3007|histone cluster 1, H1d	AK312845|HIST1H1D|3007|histone cluster 1, H1d	NM_005320|HIST1H1D|3007|histone cluster 1, H1d	BC104874|HIST1H1D|3007|histone cluster 1, H1d	BC111971|HIST1H1D|3007|histone cluster 1, H1d
hg19_v1_chrX_-_18690187_18690222	0.172813	LHX3,4.p2	AF014459|RS1|6247|retinoschisin 1	DQ426892|RS1|6247|retinoschisin 1	NM_000330|RS1|6247|retinoschisin 1
hg19_v1_chr8_+_107738239_107738471	0.170841	LHX3,4.p2	AK303695|OXR1|55074|oxidation resistance 1	NM_001198534|OXR1|55074|oxidation resistance 1	NM_001198535|OXR1|55074|oxidation resistance 1	AB075503|OXR1|55074|oxidation resistance 1	AK302844|OXR1|55074|oxidation resistance 1	AK316153|OXR1|55074|oxidation resistance 1	FN650109|OXR1|55074|oxidation resistance 1
hg19_v1_chr1_+_50569581_50569581	0.170804	LHX3,4.p2	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr17_-_49124128_49124328	0.170411	LHX3,4.p2	BC007524|SPAG9|9043|sperm associated antigen 9	BC059946|SPAG9|9043|sperm associated antigen 9	AK299553|SPAG9|9043|sperm associated antigen 9	AK307793|SPAG9|9043|sperm associated antigen 9	AK295098|SPAG9|9043|sperm associated antigen 9	AK309214|SPAG9|9043|sperm associated antigen 9	AK024068|SPAG9|9043|sperm associated antigen 9	NM_001251971|SPAG9|9043|sperm associated antigen 9
hg19_v1_chr18_+_61582744_61582744	0.169962	LHX3,4.p2	BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10
hg19_v1_chrX_+_28605558_28605680	0.169724	LHX3,4.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr5_+_36606456_36606456	0.169154	LHX3,4.p2	NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr15_-_56388662_56388733	0.168245	LHX3,4.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg19_v1_chr1_+_244214576_244214591	0.167661	LHX3,4.p2	AK291408|ZNF238|10472|zinc finger protein 238	AK293892|ZNF238|10472|zinc finger protein 238	BC036677|ZNF238|10472|zinc finger protein 238
hg19_v1_chr3_+_101546833_101547087	0.166322	LHX3,4.p2	NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
hg19_v1_chrX_-_77225134_77225138	0.165518	LHX3,4.p2	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4
hg19_v1_chr1_-_54411245_54411287	0.165341	LHX3,4.p2	AK225916|HSPB11|51668|heat shock protein family B (small), member 11	AF100747|HSPB11|51668|heat shock protein family B (small), member 11	BC005245|HSPB11|51668|heat shock protein family B (small), member 11	NM_016126|HSPB11|51668|heat shock protein family B (small), member 11
hg19_v1_chr10_+_63808968_63809224	0.165009	LHX3,4.p2	BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg19_v1_chr18_-_3874252_3874316	0.164379	LHX3,4.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg19_v1_chr2_-_227663454_227663505	0.163623	LHX3,4.p2	EU831611|IRS1|3667|insulin receptor substrate 1	EU831698|IRS1|3667|insulin receptor substrate 1	BC053895|IRS1|3667|insulin receptor substrate 1	NM_005544|IRS1|3667|insulin receptor substrate 1
hg19_v1_chrX_+_49091931_49091965	0.162576	LHX3,4.p2	AK298264|CCDC22|28952|coiled-coil domain containing 22	AK296911|CCDC22|28952|coiled-coil domain containing 22	AK291976|CCDC22|28952|coiled-coil domain containing 22
hg19_v1_chr1_+_244216506_244216581	0.161515	LHX3,4.p2	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg19_v1_chr2_+_172821874_172822000	0.16146	LHX3,4.p2	BC018682|HAT1|8520|histone acetyltransferase 1
hg19_v1_chr22_+_22712091_22712390	0.160643	LHX3,4.p2	BC030984|IGLV1-44|28823|immunoglobulin lambda variable 1-44	DQ892642|IGL@|3535|immunoglobulin lambda locus	DQ895879|IGL@|3535|immunoglobulin lambda locus	U96394|IGLV1-44|28823|immunoglobulin lambda variable 1-44
hg19_v1_chr1_+_50574601_50574768	0.159779	LHX3,4.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr7_-_64023454_64023504	0.159021	LHX3,4.p2	AK122937|ZNF680|340252|zinc finger protein 680	BC030700|ZNF680|340252|zinc finger protein 680	NM_001130022|ZNF680|340252|zinc finger protein 680	NM_178558|ZNF680|340252|zinc finger protein 680
hg19_v1_chr3_-_69171536_69171745	0.158676	LHX3,4.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg19_v1_chr4_-_99851785_99851787	0.155679	LHX3,4.p2	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E	NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E	BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E
hg19_v1_chr5_+_36608430_36608563	0.155652	LHX3,4.p2	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr13_-_41593491_41593507	0.154819	LHX3,4.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg19_v1_chr5_-_150467220_150467220	0.154443	LHX3,4.p2	AK290999|TNIP1|10318|TNFAIP3 interacting protein 1	NM_001252390|TNIP1|10318|TNFAIP3 interacting protein 1
hg19_v1_chr6_+_31553955_31554025	0.153539	LHX3,4.p2	NM_205838|LST1|7940|leukocyte specific transcript 1	NM_205839|LST1|7940|leukocyte specific transcript 1	BX647293|LST1|7940|leukocyte specific transcript 1	AF000425|LST1|7940|leukocyte specific transcript 1
hg19_v1_chr6_-_32157511_32158130	0.152412	LHX3,4.p2	BT009823|PBX2|5089|pre-B-cell leukemia homeobox 2	BC082261|PBX2|5089|pre-B-cell leukemia homeobox 2	BC003111|PBX2|5089|pre-B-cell leukemia homeobox 2	NM_002586|PBX2|5089|pre-B-cell leukemia homeobox 2
hg19_v1_chr14_+_29236171_29236286	0.151277	LHX3,4.p2	X74142|FOXG1|2290|forkhead box G1	X74143|FOXG1|2290|forkhead box G1	NM_005249|FOXG1|2290|forkhead box G1
hg19_v1_chr4_+_102734982_102735035	0.150208	LHX3,4.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg19_v1_chr15_-_33360084_33360387	0.149546	LHX3,4.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg19_v1_chr7_-_37488408_37488529	0.149441	LHX3,4.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr2_+_166095911_166095954	0.149311	LHX3,4.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg19_v1_chr2_+_47596447_47596644	0.149055	LHX3,4.p2	AK026585|EPCAM|4072|epithelial cell adhesion molecule	BC014785|EPCAM|4072|epithelial cell adhesion molecule	M26481|EPCAM|4072|epithelial cell adhesion molecule	M32325|EPCAM|4072|epithelial cell adhesion molecule	X14758|EPCAM|4072|epithelial cell adhesion molecule	M33011|EPCAM|4072|epithelial cell adhesion molecule	M32306|EPCAM|4072|epithelial cell adhesion molecule	DQ891338|EPCAM|4072|epithelial cell adhesion molecule	DQ894520|EPCAM|4072|epithelial cell adhesion molecule	CR542259|EPCAM|4072|epithelial cell adhesion molecule	CR542283|EPCAM|4072|epithelial cell adhesion molecule
hg19_v1_chr1_+_199996729_199997010	0.148116	LHX3,4.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg19_v1_chrX_-_55057408_55057496	0.148058	LHX3,4.p2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg19_v1_chr4_+_39063851_39063851	0.146956	LHX3,4.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg19_v1_chr2_+_169926084_169926176	0.146526	LHX3,4.p2	AF343729|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AF240697|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AF240698|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC058883|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg19_v1_chr5_+_42565963_42565965	0.14636	LHX3,4.p2	BC136496|GHR|2690|growth hormone receptor	NM_001242460|GHR|2690|growth hormone receptor	NM_001242461|GHR|2690|growth hormone receptor	NM_001242462|GHR|2690|growth hormone receptor
hg19_v1_chr18_-_46469118_46469176	0.146014	LHX3,4.p2	AK131394|SMAD7|4092|SMAD family member 7	NM_001190823|SMAD7|4092|SMAD family member 7
hg19_v1_chr11_+_22696318_22696354	0.14547	LHX3,4.p2	NM_005256|GAS2|2620|growth arrest-specific 2	U95032|GAS2|2620|growth arrest-specific 2
hg19_v1_chr19_+_7504573_7504573	0.145294	LHX3,4.p2	AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v1_chr12_+_113376001_113376193	0.144692	LHX3,4.p2	AB044545|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa
hg19_v1_chr1_+_63063186_63063237	0.144097	LHX3,4.p2	NM_014495|ANGPTL3|27329|angiopoietin-like 3	AK315304|ANGPTL3|27329|angiopoietin-like 3	AK289426|ANGPTL3|27329|angiopoietin-like 3	BC007059|ANGPTL3|27329|angiopoietin-like 3	BC058287|ANGPTL3|27329|angiopoietin-like 3	AY358273|ANGPTL3|27329|angiopoietin-like 3	AF152562|ANGPTL3|27329|angiopoietin-like 3
hg19_v1_chr4_+_54292035_54292107	0.143153	LHX3,4.p2	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr14_+_39583426_39583509	0.142582	LHX3,4.p2	AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2	NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2	BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2	AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2
hg19_v1_chr4_+_88754120_88754139	0.142299	LHX3,4.p2	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein	NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein	AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein	BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein	AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein
hg19_v1_chr1_-_149900143_149900235	0.141648	LHX3,4.p2	NM_005850|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK097315|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr1_+_50571963_50571963	0.141119	LHX3,4.p2	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg19_v1_chr9_+_79968344_79968352	0.14011	LHX3,4.p2	AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)
hg19_v1_chr5_+_96212167_96212209	0.140106	LHX3,4.p2	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2	BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2
hg19_v1_chr1_+_115572414_115572414	0.139915	LHX3,4.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg19_v1_chr6_-_27835308_27835370	0.13983	LHX3,4.p2	EU446959|HIST1H1B|3009|histone cluster 1, H1b	BC101583|HIST1H1B|3009|histone cluster 1, H1b	BC101581|HIST1H1B|3009|histone cluster 1, H1b	BC069101|HIST1H1B|3009|histone cluster 1, H1b	NM_005322|HIST1H1B|3009|histone cluster 1, H1b
hg19_v1_chr3_+_157827937_157827944	0.139477	LHX3,4.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr3_+_157827849_157827933	0.139126	LHX3,4.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg19_v1_chr16_+_2653350_2653485	0.138567	LHX3,4.p2	AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene	BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene
hg19_v1_chr10_+_91087601_91087771	0.13741	LHX3,4.p2	NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr3_+_45927995_45928116	0.137003	LHX3,4.p2	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9	NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9	AF145439|CCR9|10803|chemokine (C-C motif) receptor 9	BC069678|CCR9|10803|chemokine (C-C motif) receptor 9	AK312824|CCR9|10803|chemokine (C-C motif) receptor 9	AK313366|CCR9|10803|chemokine (C-C motif) receptor 9	AF145440|CCR9|10803|chemokine (C-C motif) receptor 9	AF145207|CCR9|10803|chemokine (C-C motif) receptor 9	AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9
hg19_v1_chr2_-_200325200_200325283	0.136909	LHX3,4.p2	AB028957|SATB2|23314|SATB homeobox 2
hg19_v1_chr5_+_36606667_36606790	0.136205	LHX3,4.p2	AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v1_chr19_-_55767103_55767150	0.136038	LHX3,4.p2	AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg19_v1_chr16_-_30934437_30934589	0.13563	LHX3,4.p2	BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)	AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)
hg19_v1_chr16_-_67517715_67517715	0.134761	LHX3,4.p2	NM_001138|AGRP|181|agouti related protein homolog (mouse)	U88063|AGRP|181|agouti related protein homolog (mouse)
hg19_v1_chr6_-_75965845_75965927	0.134509	LHX3,4.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg19_v1_chr19_+_21324826_21324887	0.133498	LHX3,4.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg19_v1_chr14_-_106452693_106453158	0.133308	LHX3,4.p2	BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v1_chr1_+_150459913_150459951	0.132975	LHX3,4.p2	AK225368|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC009997|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_025150|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC007824|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr1_-_51887740_51887792	0.131738	LHX3,4.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg19_v1_chr6_+_152011630_152011756	0.131084	LHX3,4.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1	AB588629|ESR1|2099|estrogen receptor 1	AB588630|ESR1|2099|estrogen receptor 1
hg19_v1_chr5_+_140247767_140247830	0.128776	LHX3,4.p2	BC136706|PCDHA11|56138|protocadherin alpha 11	AJ007609|PCDHA11|56138|protocadherin alpha 11	NM_018902|PCDHA11|56138|protocadherin alpha 11	NM_031861|PCDHA11|56138|protocadherin alpha 11
hg19_v1_chr18_-_51750934_51750997	0.127027	LHX3,4.p2	BC032638|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr7_-_14025826_14026138	0.12563	LHX3,4.p2	AK293802|ETV1|2115|ets variant 1	AK311134|ETV1|2115|ets variant 1	AK311194|ETV1|2115|ets variant 1	CR627389|ETV1|2115|ets variant 1	AK294572|ETV1|2115|ets variant 1	AK311707|ETV1|2115|ets variant 1	AK316007|ETV1|2115|ets variant 1	AK299693|ETV1|2115|ets variant 1	NM_001163150|ETV1|2115|ets variant 1	NM_001163151|ETV1|2115|ets variant 1	NM_001163152|ETV1|2115|ets variant 1
hg19_v1_chr1_+_177140062_177140095	0.125002	LHX3,4.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr11_-_118900078_118900277	0.124969	LHX3,4.p2	AF110819|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF110820|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF110821|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AF110822|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	CR456733|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AY423732|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	Y15409|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	BC064563|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	BC002400|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	BC003589|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_001164280|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg19_v1_chr3_+_171561138_171561158	0.124788	LHX3,4.p2	NM_001164436|TMEM212|389177|transmembrane protein 212	AK026825|TMEM212|389177|transmembrane protein 212
hg19_v1_chr1_-_68915631_68915641	0.124389	LHX3,4.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg19_v1_chr10_-_94003002_94003037	0.123355	LHX3,4.p2	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg19_v1_chr4_+_166131170_166131187	0.12317	LHX3,4.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg19_v1_chr16_-_12010518_12010518	0.122124	LHX3,4.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg19_v1_chr21_-_19775958_19775972	0.121781	LHX3,4.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg19_v1_chr14_-_35344852_35344852	0.121039	LHX3,4.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg19_v1_chr3_+_100211408_100211498	0.120629	LHX3,4.p2	AK000996|TMEM45A|55076|transmembrane protein 45A	AY450392|TMEM45A|55076|transmembrane protein 45A	NM_018004|TMEM45A|55076|transmembrane protein 45A
hg19_v1_chr1_+_151630710_151630762	0.120453	LHX3,4.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg19_v1_chrX_+_115301957_115302033	0.119964	LHX3,4.p2	AK313927|AGTR2|186|angiotensin II receptor, type 2	NM_000686|AGTR2|186|angiotensin II receptor, type 2	X87723|AGTR2|186|angiotensin II receptor, type 2	U16957|AGTR2|186|angiotensin II receptor, type 2
hg19_v1_chr12_-_16760935_16761147	0.119013	LHX3,4.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr6_-_24719286_24719402	0.118778	LHX3,4.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg19_v1_chr1_-_39347258_39347297	0.118446	LHX3,4.p2	AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa	BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough	AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough	NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa
hg19_v1_chr4_-_10041833_10042011	0.116898	LHX3,4.p2	AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9
hg19_v1_chr11_-_47516072_47516072	0.116823	LHX3,4.p2	BC031079|CELF1|10658|CUGBP, Elav-like family member 1	NM_198700|CELF1|10658|CUGBP, Elav-like family member 1
hg19_v1_chr1_-_211307314_211307456	0.116083	LHX3,4.p2	AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1
hg19_v1_chr15_-_43877043_43877090	0.115148	LHX3,4.p2	AF543190|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502586|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502588|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	NM_014659|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AB002375|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502587|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	AF502589|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1
hg19_v1_chr2_+_47596286_47596399	0.114894	LHX3,4.p2	NM_002354|EPCAM|4072|epithelial cell adhesion molecule
hg19_v1_chr5_+_140557370_140557370	0.113942	LHX3,4.p2	BC136801|PCDHB8|56128|protocadherin beta 8	NM_019120|PCDHB8|56128|protocadherin beta 8
hg19_v1_chr3_+_121902529_121902529	0.113081	LHX3,4.p2	NM_000388|CASR|846|calcium-sensing receptor	U20759|CASR|846|calcium-sensing receptor
hg19_v1_chr8_-_77913279_77913279	0.112355	LHX3,4.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg19_v1_chr4_-_83347222_83347249	0.112227	LHX3,4.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr3_-_78666943_78667028	0.111132	LHX3,4.p2	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v1_chr6_+_26104103_26104175	0.110894	LHX3,4.p2	BC130558|HIST1H4C|8364|histone cluster 1, H4c	BC130560|HIST1H4C|8364|histone cluster 1, H4c	EU446977|HIST1H4C|8364|histone cluster 1, H4c	HQ258693|HIST2H4B|554313|histone cluster 2, H4b	NM_003542|HIST1H4C|8364|histone cluster 1, H4c
hg19_v1_chr5_-_58882274_58882324	0.110793	LHX3,4.p2	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg19_v1_chr13_-_103719195_103719195	0.110718	LHX3,4.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg19_v1_chr3_-_42307661_42307661	0.10939	LHX3,4.p2	BC111026|CCK|885|cholecystokinin	NM_000729|CCK|885|cholecystokinin
hg19_v1_chr3_+_73110809_73110809	0.109003	LHX3,4.p2	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2	NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2
hg19_v1_chr1_+_111833473_111833537	0.10852	LHX3,4.p2	AK290702|CHIA|27159|chitinase, acidic	AB025008|CHIA|27159|chitinase, acidic	AB025009|CHIA|27159|chitinase, acidic	AY825504|CHIA|27159|chitinase, acidic	NM_021797|CHIA|27159|chitinase, acidic	AF290004|CHIA|27159|chitinase, acidic	AY789444|CHIA|27159|chitinase, acidic	NM_201653|CHIA|27159|chitinase, acidic
hg19_v1_chr9_-_215892_215892	0.10825	LHX3,4.p2	NM_152569|C9orf66|157983|chromosome 9 open reading frame 66
hg19_v1_chr6_-_64029847_64029881	0.108211	LHX3,4.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg19_v1_chr17_-_1248346_1248366	0.108008	LHX3,4.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v1_chr9_-_95298251_95298373	0.106571	LHX3,4.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v1_chr10_-_48390873_48390998	0.106104	LHX3,4.p2	J03912|RBP3|5949|retinol binding protein 3, interstitial	BC039844|RBP3|5949|retinol binding protein 3, interstitial	AB593121|RBP3|5949|retinol binding protein 3, interstitial	M22453|RBP3|5949|retinol binding protein 3, interstitial	NM_002900|RBP3|5949|retinol binding protein 3, interstitial
hg19_v1_chrX_+_108779009_108779020	0.105059	LHX3,4.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr1_-_160549271_160549305	0.103964	LHX3,4.p2	AK313496|CD84|8832|CD84 molecule	AF054815|CD84|8832|CD84 molecule	AF054816|CD84|8832|CD84 molecule	AF054817|CD84|8832|CD84 molecule	AF054818|CD84|8832|CD84 molecule	U96627|CD84|8832|CD84 molecule	Y12632|CD84|8832|CD84 molecule	NM_001184879|CD84|8832|CD84 molecule	NM_001184881|CD84|8832|CD84 molecule	NM_001184882|CD84|8832|CD84 molecule	NM_003874|CD84|8832|CD84 molecule
hg19_v1_chr5_+_132432880_132432902	0.103665	LHX3,4.p2	AK315862|HSPA4|3308|heat shock 70kDa protein 4
hg19_v1_chr6_-_79675672_79675833	0.100868	LHX3,4.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg19_v1_chr14_+_71996041_71996041	0.100343	LHX3,4.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg19_v1_chr3_-_17741511_17741511	0.100274	LHX3,4.p2	AK310539|TBC1D5|9779|TBC1 domain family, member 5	NM_001134381|TBC1D5|9779|TBC1 domain family, member 5
hg19_v1_chr11_-_83984230_83984322	0.0996943	LHX3,4.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg19_v1_chr10_+_35484829_35484831	0.0996409	LHX3,4.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator
hg19_v1_chr21_-_35899046_35899260	0.0982365	LHX3,4.p2	CR542065|RCAN1|1827|regulator of calcineurin 1	AK299444|RCAN1|1827|regulator of calcineurin 1	AK293293|RCAN1|1827|regulator of calcineurin 1	U85267|RCAN1|1827|regulator of calcineurin 1	NM_203418|RCAN1|1827|regulator of calcineurin 1
hg19_v1_chr8_+_66933790_66933848	0.0973167	LHX3,4.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v1_chr16_+_15489586_15489617	0.0972208	LHX3,4.p2	DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like	DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like	NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like	NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like
hg19_v1_chr6_+_43738394_43738674	0.096538	LHX3,4.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg19_v1_chr4_+_88529680_88529680	0.0963417	LHX3,4.p2	NM_014208|DSPP|1834|dentin sialophosphoprotein
hg19_v1_chr6_-_155777036_155777036	0.0960965	LHX3,4.p2	AF190122|NOX3|50508|NADPH oxidase 3	NM_015718|NOX3|50508|NADPH oxidase 3
hg19_v1_chr2_+_233709104_233709138	0.0958265	LHX3,4.p2	BC008072|GIGYF2|26058|GRB10 interacting GYF protein 2
hg19_v1_chr2_-_166930130_166930179	0.0956858	LHX3,4.p2	AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	EU368119|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit
hg19_v1_chr7_-_112727832_112727848	0.0956748	LHX3,4.p2	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr15_-_72563627_72563627	0.0940711	LHX3,4.p2	NM_020214|PARP6|56965|poly (ADP-ribose) polymerase family, member 6
hg19_v1_chr10_-_46619935_46620057	0.0937694	LHX3,4.p2	AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A
hg19_v1_chr12_+_54410641_54410714	0.0928828	LHX3,4.p2	NM_014620|HOXC4|3221|homeobox C4	NM_153693|HOXC6|3223|homeobox C6	X07495|HOXC4|3221|homeobox C4
hg19_v1_chr1_+_150459873_150459911	0.0927038	LHX3,4.p2	AK298773|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK022590|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC000541|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK315507|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK222814|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)	AY450558|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)
hg19_v1_chr2_+_228356287_228356295	0.0921587	LHX3,4.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg19_v1_chr1_-_205601999_205601999	0.0921091	LHX3,4.p2	NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)	NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v1_chr4_-_26491888_26492083	0.0918279	LHX3,4.p2	AY322549|CCKAR|886|cholecystokinin A receptor	BC074987|CCKAR|886|cholecystokinin A receptor	L13605|CCKAR|886|cholecystokinin A receptor	L19315|CCKAR|886|cholecystokinin A receptor	NM_000730|CCKAR|886|cholecystokinin A receptor	AK313978|CCKAR|886|cholecystokinin A receptor
hg19_v1_chr5_-_88199868_88199921	0.091788	LHX3,4.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr7_+_94297448_94297456	0.090994	LHX3,4.p2	AF038197|PEG10|23089|paternally expressed 10
hg19_v1_chr9_+_130911731_130911864	0.0903664	LHX3,4.p2	AK301694|LCN2|3934|lipocalin 2	AK316217|LCN2|3934|lipocalin 2	NM_005564|LCN2|3934|lipocalin 2	BC033089|LCN2|3934|lipocalin 2	X83006|LCN2|3934|lipocalin 2	CR542092|LCN2|3934|lipocalin 2	EU644752|LCN2|3934|lipocalin 2	S75256|LCN2|3934|lipocalin 2
hg19_v1_chr6_+_29855349_29855474	0.0900461	LHX3,4.p2	AK299998|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK090500|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)	AK308374|HLA-H|3136|major histocompatibility complex, class I, H (pseudogene)
hg19_v1_chr1_-_190446701_190446770	0.0894347	LHX3,4.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg19_v1_chr1_+_244214552_244214560	0.0894082	LHX3,4.p2	NM_205768|ZNF238|10472|zinc finger protein 238
hg19_v1_chr8_+_17822093_17822128	0.0893887	LHX3,4.p2	AF068293|PCM1|5108|pericentriolar material 1
hg19_v1_chrX_+_91089658_91089658	0.08875	LHX3,4.p2	AB026187|PCDH11X|27328|protocadherin 11 X-linked	AF332218|PCDH11X|27328|protocadherin 11 X-linked	AF332219|PCDH11X|27328|protocadherin 11 X-linked	AJ564932|PCDH11X|27328|protocadherin 11 X-linked	NM_014522|PCDH11X|27328|protocadherin 11 X-linked	NM_032968|PCDH11X|27328|protocadherin 11 X-linked	NM_032969|PCDH11X|27328|protocadherin 11 X-linked
hg19_v1_chrX_+_135730335_135730407	0.0880315	LHX3,4.p2	BC071754|CD40LG|959|CD40 ligand	NM_000074|CD40LG|959|CD40 ligand	AK292637|CD40LG|959|CD40 ligand	X68550|CD40LG|959|CD40 ligand	X67878|CD40LG|959|CD40 ligand	L07414|CD40LG|959|CD40 ligand	BC074950|CD40LG|959|CD40 ligand	Z15017|CD40LG|959|CD40 ligand	FN298241|CD40LG|959|CD40 ligand	AF529195|CD40LG|959|CD40 ligand	AY197739|CD40LG|959|CD40 ligand
hg19_v1_chr5_+_6746100_6746144	0.0871526	LHX3,4.p2	AK308405|PAPD7|11044|PAP associated domain containing 7	NM_001171806|PAPD7|11044|PAP associated domain containing 7	AK303516|PAPD7|11044|PAP associated domain containing 7
hg19_v1_chr21_-_31588242_31588468	0.0863335	LHX3,4.p2	DQ892002|CLDN8|9073|claudin 8	DQ895192|CLDN8|9073|claudin 8	BC058004|CLDN8|9073|claudin 8	AY358707|CLDN8|9073|claudin 8	BC020866|CLDN8|9073|claudin 8	AK223512|CLDN8|9073|claudin 8	AK022269|CLDN8|9073|claudin 8	NM_199328|CLDN8|9073|claudin 8
hg19_v1_chr17_-_10372875_10372875	0.0861385	LHX3,4.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg19_v1_chr6_+_136172802_136172901	0.0855293	LHX3,4.p2	AK290582|PDE7B|27115|phosphodiesterase 7B	AB038040|PDE7B|27115|phosphodiesterase 7B	NM_018945|PDE7B|27115|phosphodiesterase 7B	AJ251860|PDE7B|27115|phosphodiesterase 7B	BC070267|PDE7B|27115|phosphodiesterase 7B
hg19_v1_chr11_+_20620945_20620950	0.0852506	LHX3,4.p2	NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5	AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
hg19_v1_chr5_-_22853730_22853730	0.084818	LHX3,4.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr1_-_153321021_153321044	0.0841376	LHX3,4.p2	AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4	NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4	AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4
hg19_v1_chr4_+_71263598_71263692	0.0840874	LHX3,4.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg19_v1_chr2_+_216986817_216986917	0.0839579	LHX3,4.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v1_chr11_-_59633942_59634040	0.0831753	LHX3,4.p2	DQ892807|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	DQ896054|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	AK292990|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	BC018632|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	J05068|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	NM_001062|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)
hg19_v1_chr3_+_12329332_12329581	0.082743	LHX3,4.p2	NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma	NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma	X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma	AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg19_v1_chr3_-_194188967_194188967	0.082515	LHX3,4.p2	NM_024524|ATP13A3|79572|ATPase type 13A3
hg19_v1_chr6_+_29913400_29913468	0.0818458	LHX3,4.p2	
hg19_v1_chr7_-_37488554_37488556	0.0816561	LHX3,4.p2	NM_014800|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr6_-_29012951_29013016	0.0812148	LHX3,4.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg19_v1_chr2_-_152830448_152830484	0.0807765	LHX3,4.p2	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg19_v1_chrX_+_7137471_7137532	0.0806728	LHX3,4.p2	NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S	M16505|STS|412|steroid sulfatase (microsomal), isozyme S	J04964|STS|412|steroid sulfatase (microsomal), isozyme S	AK314034|STS|412|steroid sulfatase (microsomal), isozyme S
hg19_v1_chr4_-_23891608_23891699	0.080585	LHX3,4.p2	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v1_chr12_-_24102563_24102641	0.0800952	LHX3,4.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr11_+_126173954_126173984	0.0799476	LHX3,4.p2	AK307403|DCPS|28960|decapping enzyme, scavenger	BC014532|DCPS|28960|decapping enzyme, scavenger	AF077201|DCPS|28960|decapping enzyme, scavenger	AY077684|DCPS|28960|decapping enzyme, scavenger
hg19_v1_chr17_-_39191100_39191106	0.0792071	LHX3,4.p2	BC101150|KRTAP1-3|81850|keratin associated protein 1-3	BC101151|KRTAP1-3|81850|keratin associated protein 1-3	BC101153|KRTAP1-3|81850|keratin associated protein 1-3	BC069161|KRTAP1-3|81850|keratin associated protein 1-3	AJ406927|KRTAP1-3|81850|keratin associated protein 1-3	NM_030966|KRTAP1-3|81850|keratin associated protein 1-3
hg19_v1_chr14_-_95599794_95599839	0.0784318	LHX3,4.p2	HM595745|DICER1|23405|dicer 1, ribonuclease type III	NM_001195573|DICER1|23405|dicer 1, ribonuclease type III
hg19_v1_chr8_-_110986923_110987009	0.0782199	LHX3,4.p2	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1	AK313469|KCNV1|27012|potassium channel, subfamily V, member 1	AF167082|KCNV1|27012|potassium channel, subfamily V, member 1	NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1	AK297393|KCNV1|27012|potassium channel, subfamily V, member 1
hg19_v1_chr15_-_70994608_70994646	0.0779105	LHX3,4.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v1_chr3_-_128294928_128294928	0.0767566	LHX3,4.p2	AF008192|C3orf27|23434|chromosome 3 open reading frame 27	NM_007354|C3orf27|23434|chromosome 3 open reading frame 27
hg19_v1_chr1_-_67266930_67266941	0.0758156	LHX3,4.p2	BC101646|INSL5|10022|insulin-like 5	BC101648|INSL5|10022|insulin-like 5	AF133816|INSL5|10022|insulin-like 5	AY359030|INSL5|10022|insulin-like 5	NM_005478|INSL5|10022|insulin-like 5
hg19_v1_chr16_-_11375094_11375191	0.0754603	LHX3,4.p2	BT006746|PRM1|5619|protamine 1	AY651260|PRM1|5619|protamine 1	Y00443|PRM1|5619|protamine 1	AK311987|PRM1|5619|protamine 1	BC003673|PRM1|5619|protamine 1	NM_002761|PRM1|5619|protamine 1
hg19_v1_chr6_+_27777713_27777851	0.0753861	LHX3,4.p2	BC007518|HIST1H3H|8357|histone cluster 1, H3h	AK311991|HIST1H3H|8357|histone cluster 1, H3h	NM_003536|HIST1H3H|8357|histone cluster 1, H3h	EU446975|HIST1H3H|8357|histone cluster 1, H3h	BC096128|HIST1H3H|8357|histone cluster 1, H3h	BC096129|HIST1H3H|8357|histone cluster 1, H3h	BC096130|HIST1H3H|8357|histone cluster 1, H3h	BC143046|HIST1H3H|8357|histone cluster 1, H3h	BC148243|HIST1H3H|8357|histone cluster 1, H3h	BC148250|HIST1H3H|8357|histone cluster 1, H3h
hg19_v1_chr7_+_107110501_107110504	0.0752268	LHX3,4.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg19_v1_chr7_+_18548899_18548948	0.0743617	LHX3,4.p2	NM_001204147|HDAC9|9734|histone deacetylase 9	NM_001204148|HDAC9|9734|histone deacetylase 9	AK304410|HDAC9|9734|histone deacetylase 9
hg19_v1_chr6_-_13408368_13408368	0.0741196	LHX3,4.p2	AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1
hg19_v1_chr5_+_137673223_137673286	0.0739672	LHX3,4.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr7_-_140714780_140714792	0.0736765	LHX3,4.p2	NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33
hg19_v1_chrX_+_11311532_11311553	0.0733027	LHX3,4.p2	AF436849|AMELX|265|amelogenin, X-linked	BC069118|AMELX|265|amelogenin, X-linked	M86932|AMELX|265|amelogenin, X-linked	NM_001142|AMELX|265|amelogenin, X-linked	NM_182680|AMELX|265|amelogenin, X-linked	NM_182681|AMELX|265|amelogenin, X-linked	BC074951|AMELX|265|amelogenin, X-linked
hg19_v1_chr8_+_128748476_128748505	0.0726112	LHX3,4.p2	AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)
hg19_v1_chr7_-_140714730_140714770	0.0725029	LHX3,4.p2	AF078858|MRPS33|51650|mitochondrial ribosomal protein S33	BC105793|MRPS33|51650|mitochondrial ribosomal protein S33
hg19_v1_chr4_+_71296208_71296208	0.0722358	LHX3,4.p2	NM_001145006|MUC7|4589|mucin 7, secreted
hg19_v1_chr2_+_234627423_234627474	0.0721527	LHX3,4.p2	AK313623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	M57951|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	NM_007120|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC139784|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	AY435139|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC121036|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4	BC131623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v1_chr15_+_93443418_93443555	0.072063	LHX3,4.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg19_v1_chr2_+_211342405_211342432	0.0720256	LHX3,4.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v1_chr7_-_112727799_112727815	0.0719296	LHX3,4.p2	AK309392|GPR85|54329|G protein-coupled receptor 85	AF250237|GPR85|54329|G protein-coupled receptor 85	AK302769|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr8_-_90996785_90996879	0.0718544	LHX3,4.p2	BC143065|NBN|4683|nibrin	BC143066|NBN|4683|nibrin	BC108650|NBN|4683|nibrin	BC016762|NBN|4683|nibrin	BC005293|NBN|4683|nibrin	AF058696|NBN|4683|nibrin	AF051334|NBN|4683|nibrin	AK223256|NBN|4683|nibrin	BC146797|NBN|4683|nibrin	BC136802|NBN|4683|nibrin	BC136803|NBN|4683|nibrin	BC144413|NBN|4683|nibrin
hg19_v1_chr22_+_23487512_23487697	0.0716882	LHX3,4.p2	AB023061|RAB36|9609|RAB36, member RAS oncogene family	NM_004914|RAB36|9609|RAB36, member RAS oncogene family	BC104989|RAB36|9609|RAB36, member RAS oncogene family	BC104991|RAB36|9609|RAB36, member RAS oncogene family	CR456553|RAB36|9609|RAB36, member RAS oncogene family	AF133588|RAB36|9609|RAB36, member RAS oncogene family	AY336745|RAB36|9609|RAB36, member RAS oncogene family	CU013153|RAB36|9609|RAB36, member RAS oncogene family	CU013441|RAB36|9609|RAB36, member RAS oncogene family	AK296052|RAB36|9609|RAB36, member RAS oncogene family
hg19_v1_chr1_-_160549226_160549268	0.0710411	LHX3,4.p2	CR541847|CD84|8832|CD84 molecule	DQ891708|CD84|8832|CD84 molecule	DQ894872|CD84|8832|CD84 molecule	BC020063|CD84|8832|CD84 molecule	U82988|CD84|8832|CD84 molecule	AJ223324|CD84|8832|CD84 molecule	AK296290|CD84|8832|CD84 molecule	CR933666|CD84|8832|CD84 molecule
hg19_v1_chr2_+_103035148_103035253	0.0706137	LHX3,4.p2	AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein	AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein	NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein
hg19_v1_chr10_+_18689512_18689615	0.0700476	LHX3,4.p2	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg19_v1_chr3_-_33700932_33701071	0.0696472	LHX3,4.p2	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr6_+_167525294_167525294	0.0692019	LHX3,4.p2	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6
hg19_v1_chr1_+_104198140_104198141	0.0677975	LHX3,4.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr4_-_72649734_72650078	0.0676522	LHX3,4.p2	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)
hg19_v1_chr13_-_47470967_47471168	0.0674103	LHX3,4.p2	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A	NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A
hg19_v1_chr3_-_133648517_133648655	0.0670742	LHX3,4.p2	AK025826|C3orf36|80111|chromosome 3 open reading frame 36	AK225383|C3orf36|80111|chromosome 3 open reading frame 36	BC051274|C3orf36|80111|chromosome 3 open reading frame 36	BC064502|C3orf36|80111|chromosome 3 open reading frame 36	BC082257|C3orf36|80111|chromosome 3 open reading frame 36	NM_025041|C3orf36|80111|chromosome 3 open reading frame 36
hg19_v1_chr6_+_96969669_96969729	0.0667956	LHX3,4.p2	NM_015323|UFL1|23376|UFM1-specific ligase 1	BC015377|UFL1|23376|UFM1-specific ligase 1	AK307651|UFL1|23376|UFM1-specific ligase 1	BC036379|UFL1|23376|UFM1-specific ligase 1	BC028608|UFL1|23376|UFM1-specific ligase 1
hg19_v1_chr1_-_32385258_32385258	0.0663544	LHX3,4.p2	NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2
hg19_v1_chrX_-_71458760_71458908	0.0662422	LHX3,4.p2	EU069463|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	BC111486|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	NM_017669|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	AK056494|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg19_v1_chr16_-_72128214_72128214	0.0661986	LHX3,4.p2	NM_001142318|TXNL4B|54957|thioredoxin-like 4B
hg19_v1_chr7_-_14880954_14881074	0.0659819	LHX3,4.p2	BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa	BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa	BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa	NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa	NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa
hg19_v1_chr6_+_72926462_72926462	0.0652035	LHX3,4.p2	AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr1_+_180601121_180601154	0.0650439	LHX3,4.p2	BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg19_v1_chr8_-_101936521_101936527	0.0648221	LHX3,4.p2	DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg19_v1_chr15_+_58430394_58430579	0.0645885	LHX3,4.p2	AK300055|AQP9|366|aquaporin 9	NM_020980|AQP9|366|aquaporin 9	AK313214|AQP9|366|aquaporin 9	AF016495|AQP9|366|aquaporin 9	AB008775|AQP9|366|aquaporin 9	BC026258|AQP9|366|aquaporin 9
hg19_v1_chr7_-_112727778_112727783	0.0638565	LHX3,4.p2	BC030577|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr3_+_186739643_186739702	0.0638446	LHX3,4.p2	AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v1_chr11_+_131780537_131780711	0.0635094	LHX3,4.p2	NM_001144058|NTM|50863|neurotrimin	NM_001144059|NTM|50863|neurotrimin	NM_016522|NTM|50863|neurotrimin
hg19_v1_chr10_-_42863435_42863492	0.0632076	LHX3,4.p2	AF519622|LOC441666|441666|zinc finger protein 91 pseudogene
hg19_v1_chr12_-_50595303_50595315	0.0631781	LHX3,4.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr20_+_62795826_62795840	0.0627993	LHX3,4.p2	AB020642|MYT1|4661|myelin transcription factor 1	NM_004535|MYT1|4661|myelin transcription factor 1
hg19_v1_chr1_+_104292439_104292565	0.062315	LHX3,4.p2	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	AK313275|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC132995|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr6_-_76782204_76782394	0.0623008	LHX3,4.p2	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1
hg19_v1_chrX_+_91090459_91090503	0.0621279	LHX3,4.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg19_v1_chr6_-_2176224_2176224	0.0615451	LHX3,4.p2	AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase	NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase
hg19_v1_chr3_+_185046682_185046701	0.0612363	LHX3,4.p2	AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg19_v1_chr6_+_155538096_155538160	0.0609601	LHX3,4.p2	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2	BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2
hg19_v1_chr1_-_247054277_247054314	0.0608525	LHX3,4.p2	AL833491|AHCTF1|25909|AT hook containing transcription factor 1
hg19_v1_chr2_+_166326156_166326212	0.0607311	LHX3,4.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg19_v1_chr17_-_66951381_66951532	0.0605664	LHX3,4.p2	BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8	NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v1_chr4_-_87374282_87374365	0.0605275	LHX3,4.p2	NM_002753|MAPK10|5602|mitogen-activated protein kinase 10	U07620|MAPK10|5602|mitogen-activated protein kinase 10	BC051731|MAPK10|5602|mitogen-activated protein kinase 10	AK225974|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr5_-_156485969_156485969	0.0604255	LHX3,4.p2	AF043724|HAVCR1|26762|hepatitis A virus cellular receptor 1	NM_001173393|HAVCR1|26762|hepatitis A virus cellular receptor 1
hg19_v1_chr4_-_87028805_87028805	0.0602672	LHX3,4.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr10_-_22292362_22292537	0.0596831	LHX3,4.p2	AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1
hg19_v1_chr1_+_104292278_104292279	0.059672	LHX3,4.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg19_v1_chr1_-_217113007_217113016	0.0591671	LHX3,4.p2	AY388459|ESRRG|2104|estrogen-related receptor gamma	AY388458|ESRRG|2104|estrogen-related receptor gamma	NM_001243512|ESRRG|2104|estrogen-related receptor gamma	NM_001243513|ESRRG|2104|estrogen-related receptor gamma	AY388457|ESRRG|2104|estrogen-related receptor gamma	AY388460|ESRRG|2104|estrogen-related receptor gamma	NM_001243510|ESRRG|2104|estrogen-related receptor gamma	NM_001243511|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr8_+_105352050_105352055	0.058655	LHX3,4.p2	AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4	AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4	AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4	BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4	NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4
hg19_v1_chr2_+_185463235_185463252	0.0586518	LHX3,4.p2	BC150198|ZNF804A|91752|zinc finger protein 804A	AK131402|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr1_+_167298382_167298497	0.0582457	LHX3,4.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg19_v1_chr1_+_14031349_14031349	0.0577467	LHX3,4.p2	NM_012231|PRDM2|7799|PR domain containing 2, with ZNF domain	NM_015866|PRDM2|7799|PR domain containing 2, with ZNF domain	U17838|PRDM2|7799|PR domain containing 2, with ZNF domain
hg19_v1_chr9_-_34729463_34729534	0.0573164	LHX3,4.p2	AK302320|FAM205A|259308|family with sequence similarity 205, member A	NM_001141917|FAM205A|259308|family with sequence similarity 205, member A
hg19_v1_chr11_+_62037629_62037688	0.0570436	LHX3,4.p2	BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2	NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2	U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2	BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2	BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2	AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2
hg19_v1_chr18_-_45663667_45663731	0.0569907	LHX3,4.p2	AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C	NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C	EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C
hg19_v1_chr11_+_5710816_5710877	0.0568119	LHX3,4.p2	AK298934|TRIM22|10346|tripartite motif containing 22	NM_001199573|TRIM22|10346|tripartite motif containing 22	NM_006074|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr3_-_33700480_33700612	0.0567919	LHX3,4.p2	AB014527|CLASP2|23122|cytoplasmic linker associated protein 2
hg19_v1_chr2_+_90211704_90211733	0.0566857	LHX3,4.p2	
hg19_v1_chr20_-_1973451_1973451	0.0563355	LHX3,4.p2	AK289618|PDYN|5173|prodynorphin	NM_001190892|PDYN|5173|prodynorphin
hg19_v1_chr5_-_41213513_41213666	0.0561503	LHX3,4.p2	J05024|C6|729|complement component 6	J04506|C6|729|complement component 6	AK292509|C6|729|complement component 6	J05064|C6|729|complement component 6	AK313673|C6|729|complement component 6	NM_000065|C6|729|complement component 6
hg19_v1_chr4_-_122148620_122148620	0.055307	LHX3,4.p2	AK303192|TNIP3|79931|TNFAIP3 interacting protein 3	NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3
hg19_v1_chr7_-_104909442_104909525	0.0545968	LHX3,4.p2	BC035214|SRPK2|6733|SRSF protein kinase 2	U88666|SRPK2|6733|SRSF protein kinase 2	NM_182691|SRPK2|6733|SRSF protein kinase 2
hg19_v1_chrX_-_62780748_62780987	0.0539918	LHX3,4.p2	AK001756|LOC92249|92249|uncharacterized LOC92249	AL080202|LOC92249|92249|uncharacterized LOC92249
hg19_v1_chr4_-_47983430_47983549	0.0537915	LHX3,4.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg19_v1_chr8_-_72268720_72268978	0.0536566	LHX3,4.p2	AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)	BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)	BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)	AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr1_-_149783910_149783927	0.053391	LHX3,4.p2	BC110793|HIST2H2BF|440689|histone cluster 2, H2bf	AK289664|HIST2H2BF|440689|histone cluster 2, H2bf	AK299108|HIST2H2BF|440689|histone cluster 2, H2bf	AK296916|HIST2H2BF|440689|histone cluster 2, H2bf	NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf	NM_001161334|HIST2H2BF|440689|histone cluster 2, H2bf
hg19_v1_chr5_-_148016576_148016623	0.0533884	LHX3,4.p2	AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg19_v1_chr11_-_89541742_89541742	0.0533801	LHX3,4.p2	AB037682|TRIM49|57093|tripartite motif containing 49	NM_020358|TRIM49|57093|tripartite motif containing 49
hg19_v1_chr16_+_10522724_10522757	0.0532248	LHX3,4.p2	NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2	BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2
hg19_v1_chr13_+_109248499_109248529	0.0531031	LHX3,4.p2	AB020672|MYO16|23026|myosin XVI	BC146791|MYO16|23026|myosin XVI	NM_015011|MYO16|23026|myosin XVI	AL834447|MYO16|23026|myosin XVI
hg19_v1_chr2_+_185463092_185463153	0.0530617	LHX3,4.p2	AY327407|ZNF804A|91752|zinc finger protein 804A	NM_194250|ZNF804A|91752|zinc finger protein 804A	AK307596|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr4_+_147096834_147096900	0.0530304	LHX3,4.p2	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v1_chr9_-_117265452_117265494	0.0527721	LHX3,4.p2	AL110228|DFNB31|25861|deafness, autosomal recessive 31	NM_001083885|DFNB31|25861|deafness, autosomal recessive 31
hg19_v1_chr21_+_19617145_19617179	0.0527089	LHX3,4.p2	AF257472|CHODL|140578|chondrolectin	NM_024944|CHODL|140578|chondrolectin	AY358608|CHODL|140578|chondrolectin	BC009418|CHODL|140578|chondrolectin
hg19_v1_chr5_+_42565562_42565562	0.0526755	LHX3,4.p2	NM_001242406|GHR|2690|growth hormone receptor	Z11850|GHR|2690|growth hormone receptor
hg19_v1_chr5_-_9630462_9630462	0.0525601	LHX3,4.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg19_v1_chr14_-_57960432_57960575	0.0513207	LHX3,4.p2	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg19_v1_chr7_-_112726143_112726848	0.0507903	LHX3,4.p2	AK297464|GPR85|54329|G protein-coupled receptor 85	AK312587|GPR85|54329|G protein-coupled receptor 85	NM_001146266|GPR85|54329|G protein-coupled receptor 85	AL161959|GPR85|54329|G protein-coupled receptor 85	NM_001146267|GPR85|54329|G protein-coupled receptor 85
hg19_v1_chr1_-_149399159_149399234	0.0505369	LHX3,4.p2	BC110793|HIST2H2BF|440689|histone cluster 2, H2bf	NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf
hg19_v1_chr12_-_10151689_10151898	0.0504789	LHX3,4.p2	BX647321|CLEC1B|51266|C-type lectin domain family 1, member B	AF124841|CLEC1B|51266|C-type lectin domain family 1, member B	AY358599|CLEC1B|51266|C-type lectin domain family 1, member B	NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B	NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B
hg19_v1_chr9_-_8733893_8733945	0.0501812	LHX3,4.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg19_v1_chr10_+_64133915_64134171	0.0501219	LHX3,4.p2	NM_014951|ZNF365|22891|zinc finger protein 365	NM_199450|ZNF365|22891|zinc finger protein 365	NM_199451|ZNF365|22891|zinc finger protein 365	AB020651|ZNF365|22891|zinc finger protein 365	AJ505148|ZNF365|22891|zinc finger protein 365	AJ505149|ZNF365|22891|zinc finger protein 365	BC035049|ZNF365|22891|zinc finger protein 365	BC060817|ZNF365|22891|zinc finger protein 365	BC017841|ZNF365|22891|zinc finger protein 365	BC070073|ZNF365|22891|zinc finger protein 365	AJ505147|ZNF365|22891|zinc finger protein 365	AK289808|ZNF365|22891|zinc finger protein 365	AK289515|ZNF365|22891|zinc finger protein 365
hg19_v1_chr11_-_8964579_8964579	0.050052	LHX3,4.p2	NM_020646|ASCL3|56676|achaete-scute complex homolog 3 (Drosophila)
hg19_v1_chr7_+_28338939_28338939	0.0499745	LHX3,4.p2	L05913|CREB5|9586|cAMP responsive element binding protein 5	NM_182899|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr2_+_113816214_113816275	0.0497044	LHX3,4.p2	BC024747|IL36RN|26525|interleukin 36 receptor antagonist	NM_173170|IL36RN|26525|interleukin 36 receptor antagonist	AJ242738|IL36RN|26525|interleukin 36 receptor antagonist
hg19_v1_chr1_-_53608120_53608303	0.0496317	LHX3,4.p2	JF917096|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	DQ892299|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	DQ895498|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC012119|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC017242|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593061|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	BC000651|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	NM_006671|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593059|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7	AB593060|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7
hg19_v1_chr3_+_111717585_111717829	0.0493869	LHX3,4.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3
hg19_v1_chrX_+_57618268_57618268	0.0492163	LHX3,4.p2	NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B
hg19_v1_chr2_+_201473942_201474053	0.0490673	LHX3,4.p2	AK297930|AOX1|316|aldehyde oxidase 1	AK307738|AOX1|316|aldehyde oxidase 1
hg19_v1_chr19_-_22193720_22193750	0.0484425	LHX3,4.p2	BC038199|ZNF208|7757|zinc finger protein 208	AK096236|ZNF208|7757|zinc finger protein 208	NM_007153|ZNF208|7757|zinc finger protein 208
hg19_v1_chr4_+_158141735_158142034	0.0479389	LHX3,4.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg19_v1_chr2_+_152214105_152214253	0.047925	LHX3,4.p2	NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6	AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6
hg19_v1_chr11_-_4718948_4719075	0.0478896	LHX3,4.p2	BC020768|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	AY033942|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	AK314051|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	NM_030774|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2
hg19_v1_chr4_-_100212085_100212184	0.0478358	LHX3,4.p2	M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v1_chr21_+_43823970_43824054	0.0472713	LHX3,4.p2	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A
hg19_v1_chr11_+_87032428_87032456	0.0469109	LHX3,4.p2	AK024853|TMEM135|65084|transmembrane protein 135
hg19_v1_chr20_+_42187705_42187735	0.0468757	LHX3,4.p2	BC006523|SGK2|10110|serum/glucocorticoid regulated kinase 2	BC014037|SGK2|10110|serum/glucocorticoid regulated kinase 2	AF169034|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg19_v1_chr20_-_43729607_43729772	0.0465959	LHX3,4.p2	BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
hg19_v1_chrX_+_123234462_123234598	0.0465817	LHX3,4.p2	AK026678|STAG2|10735|stromal antigen 2
hg19_v1_chr1_+_24840800_24840918	0.0465371	LHX3,4.p2	HQ317426|RCAN3|11123|RCAN family member 3	JN203053|RCAN3|11123|RCAN family member 3	NM_001251980|RCAN3|11123|RCAN family member 3	NM_001251982|RCAN3|11123|RCAN family member 3	NM_001251985|RCAN3|11123|RCAN family member 3	EF467309|RCAN3|11123|RCAN family member 3	EF431960|RCAN3|11123|RCAN family member 3	EF529733|RCAN3|11123|RCAN family member 3	AF176116|RCAN3|11123|RCAN family member 3	AY906854|RCAN3|11123|RCAN family member 3	DQ892434|RCAN3|11123|RCAN family member 3	DQ895645|RCAN3|11123|RCAN family member 3	AF176117|RCAN3|11123|RCAN family member 3
hg19_v1_chr12_-_91398757_91398802	0.0457946	LHX3,4.p2	AK290642|EPYC|1833|epiphycan	BC030958|EPYC|1833|epiphycan	NM_004950|EPYC|1833|epiphycan
hg19_v1_chr3_-_15563160_15563276	0.0453299	LHX3,4.p2	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v1_chr10_-_69752385_69752431	0.0452897	LHX3,4.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg19_v1_chr14_-_88793250_88793255	0.0449994	LHX3,4.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr3_+_69812620_69812706	0.0447603	LHX3,4.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr1_+_213123853_213123982	0.0447452	LHX3,4.p2	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg19_v1_chr20_+_30697291_30697447	0.0446199	LHX3,4.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr8_-_42623928_42623928	0.0446173	LHX3,4.p2	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg19_v1_chr4_+_187148624_187148712	0.0441822	LHX3,4.p2	AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1
hg19_v1_chr17_+_39240412_39240458	0.0441461	LHX3,4.p2	NM_033061|KRTAP4-7|100132476|keratin associated protein 4-7
hg19_v1_chr6_+_29426130_29426230	0.0435826	LHX3,4.p2	BC036097|OR2H1|26716|olfactory receptor, family 2, subfamily H, member 1	BC048991|OR2H1|26716|olfactory receptor, family 2, subfamily H, member 1	NM_030883|OR2H1|26716|olfactory receptor, family 2, subfamily H, member 1
hg19_v1_chr12_+_12223872_12223894	0.0434959	LHX3,4.p2	AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)	BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)	NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)	AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)
hg19_v1_chr6_-_24583454_24583454	0.0433709	LHX3,4.p2	AK310289|KIAA0319|9856|KIAA0319	NM_001252328|KIAA0319|9856|KIAA0319
hg19_v1_chr7_-_44580857_44580913	0.0432631	LHX3,4.p2	AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1
hg19_v1_chr15_+_68346655_68346667	0.0431555	LHX3,4.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg19_v1_chr10_-_21186530_21186530	0.0431526	LHX3,4.p2	NM_006393|NEBL|10529|nebulette	Y16241|NEBL|10529|nebulette
hg19_v1_chr11_+_101983170_101983244	0.0430365	LHX3,4.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg19_v1_chr21_+_35736322_35736371	0.042604	LHX3,4.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg19_v1_chr3_-_113897849_113897983	0.0425388	LHX3,4.p2	AY228457|DRD3|1814|dopamine receptor D3	AY228458|DRD3|1814|dopamine receptor D3	NM_000796|DRD3|1814|dopamine receptor D3	NM_033663|DRD3|1814|dopamine receptor D3	AY228454|DRD3|1814|dopamine receptor D3
hg19_v1_chr2_-_166060552_166060603	0.0424255	LHX3,4.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg19_v1_chr1_-_200378832_200378986	0.0422559	LHX3,4.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr15_+_25230199_25230249	0.0421069	LHX3,4.p2	AF019618|PAR5|8123|Prader-Willi/Angelman syndrome-5
hg19_v1_chr6_+_64286348_64286872	0.0418813	LHX3,4.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr8_-_20040612_20040716	0.0416367	LHX3,4.p2	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1
hg19_v1_chr18_+_61254533_61254662	0.0413994	LHX3,4.p2	NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13
hg19_v1_chr20_+_30063090_30063109	0.0412559	LHX3,4.p2	AK313060|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	BC039813|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	NM_014012|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	AF152863|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1
hg19_v1_chr8_-_124749573_124749665	0.0405827	LHX3,4.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr8_+_22210311_22210342	0.0404337	LHX3,4.p2	AK000397|PIWIL2|55124|piwi-like 2 (Drosophila)
hg19_v1_chr13_-_49975734_49975734	0.0397032	LHX3,4.p2	NM_030925|CAB39L|81617|calcium binding protein 39-like
hg19_v1_chr11_-_123525300_123525314	0.0396334	LHX3,4.p2	AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta	NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta	NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg19_v1_chr2_-_225378320_225378353	0.0394314	LHX3,4.p2	U58089|CUL3|8452|cullin 3
hg19_v1_chr19_+_48949241_48949278	0.0392701	LHX3,4.p2	AF337808|GRWD1|83743|glutamate-rich WD repeat containing 1	BC002440|GRWD1|83743|glutamate-rich WD repeat containing 1	EF011614|GRWD1|83743|glutamate-rich WD repeat containing 1	AL713729|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ892630|GRWD1|83743|glutamate-rich WD repeat containing 1	DQ895868|GRWD1|83743|glutamate-rich WD repeat containing 1	BC036281|GRWD1|83743|glutamate-rich WD repeat containing 1	BC047351|GRWD1|83743|glutamate-rich WD repeat containing 1
hg19_v1_chrX_+_113818550_113818595	0.0390268	LHX3,4.p2	NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C
hg19_v1_chr7_-_126883568_126883568	0.0389733	LHX3,4.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg19_v1_chr2_-_183387063_183387506	0.0387416	LHX3,4.p2	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent
hg19_v1_chr10_-_22292640_22292690	0.0387039	LHX3,4.p2	BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1
hg19_v1_chr19_-_53662279_53662321	0.0386925	LHX3,4.p2	BC002938|ZNF347|84671|zinc finger protein 347	BC015611|ZNF347|84671|zinc finger protein 347	AY029765|ZNF347|84671|zinc finger protein 347	AK289994|ZNF347|84671|zinc finger protein 347	AK314603|ZNF347|84671|zinc finger protein 347	AK096623|ZNF347|84671|zinc finger protein 347	NM_001172674|ZNF347|84671|zinc finger protein 347	NM_001172675|ZNF347|84671|zinc finger protein 347	NM_032584|ZNF347|84671|zinc finger protein 347
hg19_v1_chr8_-_132052834_132052834	0.038525	LHX3,4.p2	NM_001115|ADCY8|114|adenylate cyclase 8 (brain)
hg19_v1_chr3_+_46411632_46411632	0.0383432	LHX3,4.p2	NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5	NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5
hg19_v1_chr1_+_59775749_59775758	0.0379961	LHX3,4.p2	NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing	AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing
hg19_v1_chr5_+_69321071_69321259	0.0374794	LHX3,4.p2	NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)	BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)
hg19_v1_chr1_+_186265404_186265410	0.0370479	LHX3,4.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg19_v1_chr18_+_66465316_66465369	0.0370297	LHX3,4.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr1_-_89357181_89357242	0.0368957	LHX3,4.p2	AB451296|GTF2B|2959|general transcription factor IIB	EU446894|GTF2B|2959|general transcription factor IIB	M76766|GTF2B|2959|general transcription factor IIB
hg19_v1_chr14_+_103851769_103851772	0.0362698	LHX3,4.p2	BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr2_-_86116016_86116156	0.0361025	LHX3,4.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v1_chr9_+_111624545_111624602	0.0360122	LHX3,4.p2	BC014610|ACTL7A|10881|actin-like 7A	AK314981|ACTL7A|10881|actin-like 7A	NM_006687|ACTL7A|10881|actin-like 7A
hg19_v1_chrX_+_49091979_49092095	0.0353729	LHX3,4.p2	BC000972|CCDC22|28952|coiled-coil domain containing 22	AK316375|CCDC22|28952|coiled-coil domain containing 22	AJ005890|CCDC22|28952|coiled-coil domain containing 22	DQ894170|CCDC22|28952|coiled-coil domain containing 22	EU176573|CCDC22|28952|coiled-coil domain containing 22	BC011675|CCDC22|28952|coiled-coil domain containing 22
hg19_v1_chr17_-_38821286_38821415	0.0352866	LHX3,4.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg19_v1_chr1_-_33430285_33430508	0.035283	LHX3,4.p2	NM_001127361|RNF19B|127544|ring finger protein 19B	NM_153341|RNF19B|127544|ring finger protein 19B	AK131439|RNF19B|127544|ring finger protein 19B
hg19_v1_chr12_+_75784878_75784893	0.0352811	LHX3,4.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chr19_+_49199227_49199295	0.0348442	LHX3,4.p2	NM_000511|FUT2|2524|fucosyltransferase 2 (secretor status included)	NM_001097638|FUT2|2524|fucosyltransferase 2 (secretor status included)	AK290277|FUT2|2524|fucosyltransferase 2 (secretor status included)	D87942|FUT2|2524|fucosyltransferase 2 (secretor status included)	BC001899|FUT2|2524|fucosyltransferase 2 (secretor status included)	BC121066|FUT2|2524|fucosyltransferase 2 (secretor status included)
hg19_v1_chr10_+_72163914_72163931	0.03483	LHX3,4.p2	BC050633|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2
hg19_v1_chr7_-_36764000_36764153	0.03456	LHX3,4.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg19_v1_chr16_+_2732475_2732524	0.0339394	LHX3,4.p2	NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5	AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5
hg19_v1_chr19_+_54466289_54466429	0.0339056	LHX3,4.p2	AF361354|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8	NM_031895|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8	AF288388|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8
hg19_v1_chr1_+_35851101_35851133	0.0338819	LHX3,4.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg19_v1_chr9_+_79093256_79093256	0.0335624	LHX3,4.p2	AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2
hg19_v1_chr14_+_103851693_103851713	0.0335269	LHX3,4.p2	NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr12_+_56414688_56414831	0.0335199	LHX3,4.p2	NM_022465|IKZF4|64375|IKAROS family zinc finger 4 (Eos)	AK122880|IKZF4|64375|IKAROS family zinc finger 4 (Eos)
hg19_v1_chr10_+_118305427_118305604	0.0334728	LHX3,4.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg19_v1_chr6_+_72596405_72596451	0.0332603	LHX3,4.p2	AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr8_-_95220769_95220819	0.033192	LHX3,4.p2	U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)
hg19_v1_chr2_-_172967627_172967632	0.033063	LHX3,4.p2	AK291367|DLX2|1746|distal-less homeobox 2	AK316129|DLX2|1746|distal-less homeobox 2
hg19_v1_chr7_-_26232148_26232154	0.0329607	LHX3,4.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v1_chr2_-_213403280_213403351	0.0329314	LHX3,4.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg19_v1_chr6_+_72926144_72926144	0.0328703	LHX3,4.p2	AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg19_v1_chr6_-_33771756_33771792	0.0320682	LHX3,4.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg19_v1_chr11_+_64051810_64051810	0.031852	LHX3,4.p2	AK300209|GPR137|56834|G protein-coupled receptor 137	NM_001170726|GPR137|56834|G protein-coupled receptor 137
hg19_v1_chr10_+_115312777_115312880	0.0317376	LHX3,4.p2	NM_004132|HABP2|3026|hyaluronan binding protein 2	D49742|HABP2|3026|hyaluronan binding protein 2	S83182|HABP2|3026|hyaluronan binding protein 2	BC031412|HABP2|3026|hyaluronan binding protein 2	AK290832|HABP2|3026|hyaluronan binding protein 2	AK303761|HABP2|3026|hyaluronan binding protein 2	AK303759|HABP2|3026|hyaluronan binding protein 2	DQ890820|HABP2|3026|hyaluronan binding protein 2	DQ893975|HABP2|3026|hyaluronan binding protein 2
hg19_v1_chr4_+_123091757_123091757	0.0313818	LHX3,4.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg19_v1_chrX_+_24167728_24167857	0.0313166	LHX3,4.p2	AB209892|ZFX|7543|zinc finger protein, X-linked	NM_001178086|ZFX|7543|zinc finger protein, X-linked	NM_001178095|ZFX|7543|zinc finger protein, X-linked	X59738|ZFX|7543|zinc finger protein, X-linked	NM_001178084|ZFX|7543|zinc finger protein, X-linked	NM_001178085|ZFX|7543|zinc finger protein, X-linked	NM_003410|ZFX|7543|zinc finger protein, X-linked
hg19_v1_chr13_+_109281569_109281570	0.0312984	LHX3,4.p2	AB290159|MYO16|23026|myosin XVI	AK127806|MYO16|23026|myosin XVI	NM_001198950|MYO16|23026|myosin XVI
hg19_v1_chr10_+_49609641_49609703	0.0304449	LHX3,4.p2	BC130570|MAPK8|5599|mitogen-activated protein kinase 8	BC130572|MAPK8|5599|mitogen-activated protein kinase 8	BC144063|MAPK8|5599|mitogen-activated protein kinase 8	L26318|MAPK8|5599|mitogen-activated protein kinase 8	NM_002750|MAPK8|5599|mitogen-activated protein kinase 8	NM_139046|MAPK8|5599|mitogen-activated protein kinase 8	NM_139047|MAPK8|5599|mitogen-activated protein kinase 8	NM_139049|MAPK8|5599|mitogen-activated protein kinase 8	U35004|MAPK8|5599|mitogen-activated protein kinase 8	U35005|MAPK8|5599|mitogen-activated protein kinase 8	U34822|MAPK8|5599|mitogen-activated protein kinase 8	HQ258413|MAPK8|5599|mitogen-activated protein kinase 8	AB451231|MAPK8|5599|mitogen-activated protein kinase 8	AB451271|MAPK8|5599|mitogen-activated protein kinase 8	AB451354|MAPK8|5599|mitogen-activated protein kinase 8	AB451398|MAPK8|5599|mitogen-activated protein kinase 8	DQ234352|MAPK8|5599|mitogen-activated protein kinase 8
hg19_v1_chr2_+_226265601_226265690	0.0301982	LHX3,4.p2	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
hg19_v1_chr12_-_91576805_91576805	0.0300299	LHX3,4.p2	NM_001920|DCN|1634|decorin
hg19_v1_chr7_-_99097909_99097921	0.0300265	LHX3,4.p2	AK022360|ZNF394|84124|zinc finger protein 394
hg19_v1_chr1_-_89664510_89664632	0.0298199	LHX3,4.p2	AK304245|GBP4|115361|guanylate binding protein 4	AF288814|GBP4|115361|guanylate binding protein 4	AK131094|GBP4|115361|guanylate binding protein 4	AL832576|GBP4|115361|guanylate binding protein 4	BC070055|GBP4|115361|guanylate binding protein 4	BC017889|GBP4|115361|guanylate binding protein 4	AK312417|GBP4|115361|guanylate binding protein 4	BC008421|GBP4|115361|guanylate binding protein 4	NM_052941|GBP4|115361|guanylate binding protein 4
hg19_v1_chr5_+_140529619_140529838	0.0298029	LHX3,4.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr4_+_26322627_26322646	0.0295087	LHX3,4.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr4_+_71457974_71458039	0.0294031	LHX3,4.p2	NM_016519|AMBN|258|ameloblastin (enamel matrix protein)	AF209780|AMBN|258|ameloblastin (enamel matrix protein)	AF263464|AMBN|258|ameloblastin (enamel matrix protein)	AJ537437|AMBN|258|ameloblastin (enamel matrix protein)	AF219994|AMBN|258|ameloblastin (enamel matrix protein)	AK314918|AMBN|258|ameloblastin (enamel matrix protein)	BC106931|AMBN|258|ameloblastin (enamel matrix protein)	BC106932|AMBN|258|ameloblastin (enamel matrix protein)
hg19_v1_chr10_-_96829074_96829253	0.0292059	LHX3,4.p2	M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8
hg19_v1_chr1_+_20208837_20208891	0.0290065	LHX3,4.p2	NM_015207|OTUD3|23252|OTU domain containing 3
hg19_v1_chr12_-_10605928_10605978	0.0288115	LHX3,4.p2	X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1
hg19_v1_chr15_-_75918445_75918445	0.028519	LHX3,4.p2	NM_001042581|SNUPN|10073|snurportin 1	NM_005701|SNUPN|10073|snurportin 1
hg19_v1_chr11_-_128807712_128807788	0.0283173	LHX3,4.p2	AY302135|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1	NM_001195194|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1	BC069399|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1	BC069426|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1
hg19_v1_chr6_+_154331630_154331635	0.0280162	LHX3,4.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg19_v1_chr20_+_17207680_17207950	0.0279092	LHX3,4.p2	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg19_v1_chr20_+_16728997_16729046	0.0278751	LHX3,4.p2	BC101688|OTOR|56914|otoraplin	BC101690|OTOR|56914|otoraplin	AF233261|OTOR|56914|otoraplin	NM_020157|OTOR|56914|otoraplin	AY359082|OTOR|56914|otoraplin	AF243505|OTOR|56914|otoraplin	AJ242552|OTOR|56914|otoraplin
hg19_v1_chr5_+_65372744_65372866	0.0277311	LHX3,4.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chrX_-_31284946_31285122	0.0266066	LHX3,4.p2	M92650|DMD|1756|dystrophin	BC070078|DMD|1756|dystrophin	NM_004015|DMD|1756|dystrophin	NM_004016|DMD|1756|dystrophin	NM_004017|DMD|1756|dystrophin	NM_004018|DMD|1756|dystrophin	NM_004019|DMD|1756|dystrophin	S42206|DMD|1756|dystrophin	BC094758|DMD|1756|dystrophin	AK299936|DMD|1756|dystrophin	BC028720|DMD|1756|dystrophin	S38776|DMD|1756|dystrophin
hg19_v1_chr7_-_99097715_99097908	0.0264662	LHX3,4.p2	EU446676|ZNF394|84124|zinc finger protein 394	AK222948|ZNF394|84124|zinc finger protein 394	BC051847|ZNF394|84124|zinc finger protein 394	NM_032164|ZNF394|84124|zinc finger protein 394	BC017051|ZNF394|84124|zinc finger protein 394	AJ297365|ZNF394|84124|zinc finger protein 394	AK172865|ZNF394|84124|zinc finger protein 394	AY642122|ZNF394|84124|zinc finger protein 394	BC025241|ZNF394|84124|zinc finger protein 394
hg19_v1_chr2_+_121554866_121554920	0.0264442	LHX3,4.p2	NM_005270|GLI2|2736|GLI family zinc finger 2	BC111410|GLI2|2736|GLI family zinc finger 2	DQ086814|GLI2|2736|GLI family zinc finger 2	AY493737|GLI2|2736|GLI family zinc finger 2	AY493738|GLI2|2736|GLI family zinc finger 2	AY493739|GLI2|2736|GLI family zinc finger 2	DQ004396|GLI2|2736|GLI family zinc finger 2
hg19_v1_chr7_+_95115212_95115374	0.0258892	LHX3,4.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg19_v1_chr10_+_69869249_69869427	0.0257178	LHX3,4.p2	NM_032578|MYPN|84665|myopalladin	AK027343|MYPN|84665|myopalladin	BX647637|MYPN|84665|myopalladin	AL832002|MYPN|84665|myopalladin	AL834247|MYPN|84665|myopalladin	BC142609|MYPN|84665|myopalladin	BC144333|MYPN|84665|myopalladin	BC144334|MYPN|84665|myopalladin
hg19_v1_chr1_-_35450928_35450951	0.0256817	LHX3,4.p2	NM_001195156|ZMYM6NB|100506144|ZMYM6 neighbor
hg19_v1_chr22_+_39966757_39966757	0.0255937	LHX3,4.p2	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg19_v1_chr17_-_62340571_62340601	0.0254547	LHX3,4.p2	AL832371|TEX2|55852|testis expressed 2	BC040521|TEX2|55852|testis expressed 2	AL834251|TEX2|55852|testis expressed 2	AK091214|TEX2|55852|testis expressed 2
hg19_v1_chrX_+_100354797_100354797	0.0254	LHX3,4.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chr19_+_48949029_48949106	0.0253044	LHX3,4.p2	NM_031485|GRWD1|83743|glutamate-rich WD repeat containing 1	AK074676|GRWD1|83743|glutamate-rich WD repeat containing 1	AK300225|GRWD1|83743|glutamate-rich WD repeat containing 1
hg19_v1_chr14_+_78870092_78870092	0.0251028	LHX3,4.p2	AB018286|NRXN3|9369|neurexin 3	BC152457|NRXN3|9369|neurexin 3	NM_004796|NRXN3|9369|neurexin 3
hg19_v1_chr3_+_238274_238289	0.025076	LHX3,4.p2	NM_001253387|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr6_+_24403144_24403273	0.0248694	LHX3,4.p2	NM_020662|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	AK297418|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	AK299825|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	AF288288|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	BC069009|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	AK054587|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	AK291058|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	AK298849|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	BC001028|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	BC018833|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)	AF293076|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)
hg19_v1_chr16_-_30103204_30103290	0.0247364	LHX3,4.p2	BC026031|TBX6|6911|T-box 6	NM_004608|TBX6|6911|T-box 6	AK022330|TBX6|6911|T-box 6
hg19_v1_chr17_+_3377346_3377403	0.0245673	LHX3,4.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg19_v1_chr2_-_109605668_109605827	0.0242309	LHX3,4.p2	AK313781|EDAR|10913|ectodysplasin A receptor	CR749352|EDAR|10913|ectodysplasin A receptor	AF130988|EDAR|10913|ectodysplasin A receptor	NM_022336|EDAR|10913|ectodysplasin A receptor
hg19_v1_chr1_-_35450902_35450919	0.0240182	LHX3,4.p2	BC029439|ZMYM6NB|100506144|ZMYM6 neighbor
hg19_v1_chr15_-_49103183_49103342	0.023923	LHX3,4.p2	BC117182|CEP152|22995|centrosomal protein 152kDa	AB020719|CEP152|22995|centrosomal protein 152kDa	BC069186|CEP152|22995|centrosomal protein 152kDa	AK303805|CEP152|22995|centrosomal protein 152kDa	BX648822|CEP152|22995|centrosomal protein 152kDa	BC107721|CEP152|22995|centrosomal protein 152kDa	NM_001194998|CEP152|22995|centrosomal protein 152kDa	NM_014985|CEP152|22995|centrosomal protein 152kDa
hg19_v1_chr17_-_42143937_42143995	0.023742	LHX3,4.p2	AK300637|LSM12|124801|LSM12 homolog (S. cerevisiae)	AL832076|LSM12|124801|LSM12 homolog (S. cerevisiae)
hg19_v1_chr17_-_42144001_42144031	0.0223236	LHX3,4.p2	AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)	BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)	BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)
hg19_v1_chr16_-_3930713_3930721	0.0222464	LHX3,4.p2	U85962|CREBBP|1387|CREB binding protein
hg19_v1_chr10_+_57358749_57358800	0.0219294	LHX3,4.p2	NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5
hg19_v1_chr1_+_146714290_146714333	0.0216511	LHX3,4.p2	NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like	EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like	AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like	AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like	AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like	AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like
hg19_v1_chr15_-_75918718_75918718	0.0215721	LHX3,4.p2	NM_001042588|SNUPN|10073|snurportin 1
hg19_v1_chr11_-_102745666_102745763	0.0214131	LHX3,4.p2	HQ258263|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)	L23808|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)	AK313959|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)	BC112301|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)	BC143773|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)	NM_002426|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)
hg19_v1_chr11_+_30252562_30252562	0.0212944	LHX3,4.p2	NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide	NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide
hg19_v1_chr1_+_206317458_206317605	0.0207156	LHX3,4.p2	NM_001910|CTSE|1510|cathepsin E	NM_148964|CTSE|1510|cathepsin E	AJ250716|CTSE|1510|cathepsin E	AJ250717|CTSE|1510|cathepsin E	BC042537|CTSE|1510|cathepsin E	J05036|CTSE|1510|cathepsin E	AK292057|CTSE|1510|cathepsin E	AK298069|CTSE|1510|cathepsin E
hg19_v1_chr18_-_51750998_51751157	0.0206977	LHX3,4.p2	AF072242|MBD2|8932|methyl-CpG binding domain protein 2	NM_003927|MBD2|8932|methyl-CpG binding domain protein 2	NM_015832|MBD2|8932|methyl-CpG binding domain protein 2
hg19_v1_chr12_-_91576579_91576582	0.0206202	LHX3,4.p2	AL355731|DCN|1634|decorin
hg19_v1_chr18_+_55019720_55019720	0.0204817	LHX3,4.p2	AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v1_chr5_+_174151531_174151694	0.0203134	LHX3,4.p2	NM_002449|MSX2|4488|msh homeobox 2	D31771|MSX2|4488|msh homeobox 2	D89377|MSX2|4488|msh homeobox 2	S75361|MSX2|4488|msh homeobox 2	D26145|MSX2|4488|msh homeobox 2	BC015509|MSX2|4488|msh homeobox 2	X69295|MSX2|4488|msh homeobox 2	DQ891600|MSX2|4488|msh homeobox 2	DQ894795|MSX2|4488|msh homeobox 2	BT009814|MSX2|4488|msh homeobox 2
hg19_v1_chr1_+_20208908_20208920	0.0201079	LHX3,4.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg19_v1_chr3_-_69129502_69129544	0.0197992	LHX3,4.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg19_v1_chr19_-_50413063_50413142	0.0197551	LHX3,4.p2	CR541721|NUP62|23636|nucleoporin 62kDa	AM393785|NUP62|23636|nucleoporin 62kDa	DQ892591|NUP62|23636|nucleoporin 62kDa	DQ896857|NUP62|23636|nucleoporin 62kDa	BC014842|NUP62|23636|nucleoporin 62kDa
hg19_v1_chr8_+_123794043_123794164	0.0196386	LHX3,4.p2	AB020661|ZHX2|22882|zinc fingers and homeoboxes 2
hg19_v1_chr12_-_52761254_52761308	0.0192908	LHX3,4.p2	X99140|KRT85|3891|keratin 85	NM_002283|KRT85|3891|keratin 85
hg19_v1_chr17_+_61086897_61086897	0.0190517	LHX3,4.p2	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v1_chr8_-_108510094_108510282	0.0190335	LHX3,4.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	NM_001199859|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg19_v1_chr6_+_64231626_64231684	0.0186704	LHX3,4.p2	CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg19_v1_chr11_-_102595623_102595684	0.0184082	LHX3,4.p2	BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)
hg19_v1_chr1_+_168545710_168545874	0.0178572	LHX3,4.p2	NM_002995|XCL1|6375|chemokine (C motif) ligand 1	BC070309|XCL1|6375|chemokine (C motif) ligand 1	X86474|XCL1|6375|chemokine (C motif) ligand 1	D43768|XCL1|6375|chemokine (C motif) ligand 1	BC069817|XCL1|6375|chemokine (C motif) ligand 1	U23772|XCL1|6375|chemokine (C motif) ligand 1
hg19_v1_chr13_+_53602829_53602995	0.0177735	LHX3,4.p2	AK000683|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	HQ258281|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg19_v1_chr1_+_197237333_197237542	0.0175641	LHX3,4.p2	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)	NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)	AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)	AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)	AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)	AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)	AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)	BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)	BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)	AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)
hg19_v1_chr6_+_25754926_25754973	0.0173707	LHX3,4.p2	AK024903|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	NM_005495|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	AK293354|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4
hg19_v1_chr11_-_129062092_129062092	0.0173449	LHX3,4.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg19_v1_chr9_+_71650643_71650731	0.0170476	LHX3,4.p2	BC048097|FXN|2395|frataxin	BC023633|FXN|2395|frataxin
hg19_v1_chr1_-_35450923_35450927	0.0170246	LHX3,4.p2	AK129824|ZMYM6NB|100506144|ZMYM6 neighbor
hg19_v1_chr11_-_67141647_67141647	0.0169859	LHX3,4.p2	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1	NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1
hg19_v1_chr6_+_26365397_26365508	0.0158807	LHX3,4.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg19_v1_chr22_-_41842432_41842479	0.0158766	LHX3,4.p2	CR456594|TOB2|10766|transducer of ERBB2, 2
hg19_v1_chr16_-_21663962_21663991	0.0158175	LHX3,4.p2	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6	NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr17_-_10452939_10453016	0.0156452	LHX3,4.p2	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult	NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult
hg19_v1_chr12_-_125052009_125052141	0.0156206	LHX3,4.p2	AB209089|NCOR2|9612|nuclear receptor corepressor 2	NM_001077261|NCOR2|9612|nuclear receptor corepressor 2	NM_001206654|NCOR2|9612|nuclear receptor corepressor 2	NM_006312|NCOR2|9612|nuclear receptor corepressor 2
hg19_v1_chr5_-_149829231_149829258	0.0155258	LHX3,4.p2	BC020515|RPS14|6208|ribosomal protein S14
hg19_v1_chr11_+_89764273_89764273	0.0152962	LHX3,4.p2	NM_001195234|TRIM49L2|642612|tripartite motif containing 49-like 2
hg19_v1_chr5_+_40909617_40909673	0.0152777	LHX3,4.p2	BC063851|C7|730|complement component 7	AK304848|C7|730|complement component 7	AK312737|C7|730|complement component 7
hg19_v1_chr20_+_45523505_45523511	0.0152722	LHX3,4.p2	BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)
hg19_v1_chr19_-_3772208_3772218	0.0151849	LHX3,4.p2	AY211277|RAX2|84839|retina and anterior neural fold homeobox 2	BC007284|RAX2|84839|retina and anterior neural fold homeobox 2	BC018709|RAX2|84839|retina and anterior neural fold homeobox 2	BC032512|RAX2|84839|retina and anterior neural fold homeobox 2	NM_032753|RAX2|84839|retina and anterior neural fold homeobox 2
hg19_v1_chr14_+_103851775_103851997	0.014421	LHX3,4.p2	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg19_v1_chr12_-_112123506_112123595	0.0141455	LHX3,4.p2	AK308279|BRAP|8315|BRCA1 associated protein
hg19_v1_chr11_+_92085261_92085261	0.0141446	LHX3,4.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg19_v1_chr1_+_171217632_171217691	0.0140895	LHX3,4.p2	AK290113|FMO1|2326|flavin containing monooxygenase 1	AK315100|FMO1|2326|flavin containing monooxygenase 1	M64082|FMO1|2326|flavin containing monooxygenase 1	NM_002021|FMO1|2326|flavin containing monooxygenase 1	AK296198|FMO1|2326|flavin containing monooxygenase 1
hg19_v1_chr4_+_113218498_113218557	0.0137293	LHX3,4.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg19_v1_chr20_+_30697512_30697570	0.0137289	LHX3,4.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg19_v1_chr8_+_42552561_42552689	0.013712	LHX3,4.p2	BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3
hg19_v1_chr2_+_32502956_32502969	0.0136029	LHX3,4.p2	NM_032312|YIPF4|84272|Yip1 domain family, member 4
hg19_v1_chr21_-_47704166_47704201	0.0135538	LHX3,4.p2	AK304208|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg19_v1_chr20_-_39928708_39928738	0.0134393	LHX3,4.p2	AK122905|ZHX3|23051|zinc fingers and homeoboxes 3	AK097523|ZHX3|23051|zinc fingers and homeoboxes 3	AB081948|ZHX3|23051|zinc fingers and homeoboxes 3	BC047070|ZHX3|23051|zinc fingers and homeoboxes 3	AK292415|ZHX3|23051|zinc fingers and homeoboxes 3	NM_015035|ZHX3|23051|zinc fingers and homeoboxes 3
hg19_v1_chr11_+_128563955_128563968	0.0133735	LHX3,4.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr12_+_20963637_20963659	0.01311	LHX3,4.p2	BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3
hg19_v1_chr6_-_74161978_74162011	0.0130892	LHX3,4.p2	BC113606|MB21D1|115004|Mab-21 domain containing 1	BC113608|MB21D1|115004|Mab-21 domain containing 1	BC143694|MB21D1|115004|Mab-21 domain containing 1	BC012928|MB21D1|115004|Mab-21 domain containing 1	AK097148|MB21D1|115004|Mab-21 domain containing 1	BC108714|MB21D1|115004|Mab-21 domain containing 1
hg19_v1_chr16_+_20817766_20817867	0.0130621	LHX3,4.p2	NM_001144924|LOC81691|81691|exonuclease NEF-sp	NM_001199053|LOC81691|81691|exonuclease NEF-sp	NM_030941|LOC81691|81691|exonuclease NEF-sp	BC007646|LOC81691|81691|exonuclease NEF-sp	AF332193|LOC81691|81691|exonuclease NEF-sp	AL136763|LOC81691|81691|exonuclease NEF-sp
hg19_v1_chr17_-_4938699_4938726	0.013034	LHX3,4.p2	AB362534|GPR172B|55065|G protein-coupled receptor 172B	AK023570|GPR172B|55065|G protein-coupled receptor 172B	AB362533|GPR172B|55065|G protein-coupled receptor 172B	BC060810|GPR172B|55065|G protein-coupled receptor 172B	NM_001104577|GPR172B|55065|G protein-coupled receptor 172B	NM_017986|GPR172B|55065|G protein-coupled receptor 172B
hg19_v1_chr4_+_70894129_70894175	0.012498	LHX3,4.p2	NM_000200|HTN3|3347|histatin 3	BC009791|HTN3|3347|histatin 3	BC095438|HTN3|3347|histatin 3	M26665|HTN3|3347|histatin 3
hg19_v1_chr3_-_62359189_62359189	0.012339	LHX3,4.p2	AK290464|FEZF2|55079|FEZ family zinc finger 2	NM_018008|FEZF2|55079|FEZ family zinc finger 2
hg19_v1_chr11_-_55703875_55703875	0.0122734	LHX3,4.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg19_v1_chr19_-_7812396_7812463	0.0122305	LHX3,4.p2	AY042221|CD209|30835|CD209 molecule	AY042222|CD209|30835|CD209 molecule	AY042223|CD209|30835|CD209 molecule	AY042224|CD209|30835|CD209 molecule	AY042225|CD209|30835|CD209 molecule	AY042226|CD209|30835|CD209 molecule	AY042227|CD209|30835|CD209 molecule	AY042228|CD209|30835|CD209 molecule	AY042229|CD209|30835|CD209 molecule	AY042230|CD209|30835|CD209 molecule	AY042231|CD209|30835|CD209 molecule	AY042232|CD209|30835|CD209 molecule	AY042233|CD209|30835|CD209 molecule	BC110615|CD209|30835|CD209 molecule	AF290886|CD209|30835|CD209 molecule	AK293089|CD209|30835|CD209 molecule	M98457|CD209|30835|CD209 molecule	AK304190|CD209|30835|CD209 molecule	AK313585|CD209|30835|CD209 molecule	NM_001144893|CD209|30835|CD209 molecule	NM_001144894|CD209|30835|CD209 molecule	NM_001144895|CD209|30835|CD209 molecule	NM_001144896|CD209|30835|CD209 molecule	NM_001144897|CD209|30835|CD209 molecule	NM_001144899|CD209|30835|CD209 molecule	NM_021155|CD209|30835|CD209 molecule
hg19_v1_chr7_+_86273219_86273231	0.0120543	LHX3,4.p2	BC041407|GRM3|2913|glutamate receptor, metabotropic 3	NM_000840|GRM3|2913|glutamate receptor, metabotropic 3
hg19_v1_chr6_+_134273307_134273422	0.0119282	LHX3,4.p2	NM_001253676|TBPL1|9519|TBP-like 1	AK292320|TBPL1|9519|TBP-like 1
hg19_v1_chr3_-_108248168_108248168	0.0117431	LHX3,4.p2	AB023217|MYH15|22989|myosin, heavy chain 15	NM_014981|MYH15|22989|myosin, heavy chain 15
hg19_v1_chrX_-_30327479_30327494	0.0117431	LHX3,4.p2	HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1	BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1	NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1
hg19_v1_chr1_-_7913094_7913103	0.011281	LHX3,4.p2	AF104118|UTS2|10911|urotensin 2	AY358375|UTS2|10911|urotensin 2	NM_006786|UTS2|10911|urotensin 2
hg19_v1_chr1_-_147955376_147955418	0.0108476	LHX3,4.p2	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A
hg19_v1_chr14_+_94492683_94492723	0.0108235	LHX3,4.p2	BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2
hg19_v1_chr2_-_136594749_136594749	0.0108168	LHX3,4.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg19_v1_chr7_-_22862397_22862490	0.0107275	LHX3,4.p2	CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)
hg19_v1_chr2_-_160472960_160473079	0.0106838	LHX3,4.p2	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg19_v1_chr19_+_9361605_9361719	0.0106328	LHX3,4.p2	BC146920|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24	NM_001079935|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24
hg19_v1_chr1_-_110950489_110950563	0.0104885	LHX3,4.p2	HQ257924|HBXIP|10542|hepatitis B virus x interacting protein	NM_006402|HBXIP|10542|hepatitis B virus x interacting protein	BC062619|HBXIP|10542|hepatitis B virus x interacting protein
hg19_v1_chr12_-_21927614_21927746	0.0104735	LHX3,4.p2	BC000544|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	AK291821|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	D50312|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	NM_004982|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v1_chrX_+_68835910_68835960	0.0103556	LHX3,4.p2	AF040628|EDA|1896|ectodysplasin A	AF060999|EDA|1896|ectodysplasin A	AF061189|EDA|1896|ectodysplasin A	AF061190|EDA|1896|ectodysplasin A	AF061191|EDA|1896|ectodysplasin A	AF061192|EDA|1896|ectodysplasin A	AF061193|EDA|1896|ectodysplasin A	AF061194|EDA|1896|ectodysplasin A	NM_001005609|EDA|1896|ectodysplasin A	NM_001005610|EDA|1896|ectodysplasin A	NM_001005612|EDA|1896|ectodysplasin A	NM_001005613|EDA|1896|ectodysplasin A	NM_001399|EDA|1896|ectodysplasin A	U59228|EDA|1896|ectodysplasin A	BC126143|EDA|1896|ectodysplasin A	BC144049|EDA|1896|ectodysplasin A	BC144051|EDA|1896|ectodysplasin A
hg19_v1_chr20_+_55926144_55926294	0.0102422	LHX3,4.p2	NM_003610|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)	AK307966|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)
hg19_v1_chr6_-_167797917_167797997	0.0101626	LHX3,4.p2	BC068592|TCP10|6953|t-complex 10 homolog (mouse)	U03399|TCP10|6953|t-complex 10 homolog (mouse)	BC063451|TCP10|6953|t-complex 10 homolog (mouse)	NM_004610|TCP10|6953|t-complex 10 homolog (mouse)
hg19_v1_chr3_+_119499330_119499330	0.0095911	LHX3,4.p2	AJ009936|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	AJ009937|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	NM_003889|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	NM_033013|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2
hg19_v1_chr1_-_144364203_144364245	0.00941702	LHX3,4.p2	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C	NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A
hg19_v1_chr10_-_120938337_120938357	0.00925494	LHX3,4.p2	BC021691|PRDX3|10935|peroxiredoxin 3	NM_006793|PRDX3|10935|peroxiredoxin 3	NM_014098|PRDX3|10935|peroxiredoxin 3
hg19_v1_chr17_-_39041436_39041497	0.00885066	LHX3,4.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg19_v1_chr6_-_49604524_49604586	0.00882326	LHX3,4.p2	AF031548|RHAG|6005|Rh-associated glycoprotein	DQ892782|RHAG|6005|Rh-associated glycoprotein	DQ896030|RHAG|6005|Rh-associated glycoprotein	AF031549|RHAG|6005|Rh-associated glycoprotein	AF178841|RHAG|6005|Rh-associated glycoprotein	AF179682|RHAG|6005|Rh-associated glycoprotein	AF179684|RHAG|6005|Rh-associated glycoprotein	AF179685|RHAG|6005|Rh-associated glycoprotein	AF187847|RHAG|6005|Rh-associated glycoprotein	BC012605|RHAG|6005|Rh-associated glycoprotein	X64594|RHAG|6005|Rh-associated glycoprotein	AK313505|RHAG|6005|Rh-associated glycoprotein	NM_000324|RHAG|6005|Rh-associated glycoprotein
hg19_v1_chr3_-_137851123_137851228	0.0085594	LHX3,4.p2	BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase
hg19_v1_chr1_+_167691156_167691500	0.00848711	LHX3,4.p2	NM_001146191|MPZL1|9019|myelin protein zero-like 1	NM_003953|MPZL1|9019|myelin protein zero-like 1	NM_024569|MPZL1|9019|myelin protein zero-like 1	AK297112|MPZL1|9019|myelin protein zero-like 1	AK075334|MPZL1|9019|myelin protein zero-like 1	AK307250|MPZL1|9019|myelin protein zero-like 1	AK291249|MPZL1|9019|myelin protein zero-like 1	AY359019|MPZL1|9019|myelin protein zero-like 1	AF181660|MPZL1|9019|myelin protein zero-like 1	AF478447|MPZL1|9019|myelin protein zero-like 1	BC000984|MPZL1|9019|myelin protein zero-like 1	BC007881|MPZL1|9019|myelin protein zero-like 1	AF095727|MPZL1|9019|myelin protein zero-like 1	AF087020|MPZL1|9019|myelin protein zero-like 1	AF092425|MPZL1|9019|myelin protein zero-like 1	AF095726|MPZL1|9019|myelin protein zero-like 1	AK315546|MPZL1|9019|myelin protein zero-like 1	AF239756|MPZL1|9019|myelin protein zero-like 1	BT019542|MPZL1|9019|myelin protein zero-like 1	CR542160|MPZL1|9019|myelin protein zero-like 1	HQ447352|MPZL1|9019|myelin protein zero-like 1
hg19_v1_chr17_-_18177716_18177777	0.00844576	LHX3,4.p2	AF086042|TOP3A|7156|topoisomerase (DNA) III alpha
hg19_v1_chr5_+_139876504_139876626	0.00828337	LHX3,4.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg19_v1_chr11_-_128737132_128737267	0.00820169	LHX3,4.p2	U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg19_v1_chr1_+_149553002_149553044	0.00817215	LHX3,4.p2	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C	NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg19_v1_chr9_-_34620483_34620488	0.00804929	LHX3,4.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr20_+_45523523_45523581	0.00798211	LHX3,4.p2	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)	AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)
hg19_v1_chr19_+_34710327_34710434	0.00778786	LHX3,4.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v1_chr10_-_115423640_115423804	0.00770972	LHX3,4.p2	AM392642|NRAP|4892|nebulin-related anchoring protein	AM393530|NRAP|4892|nebulin-related anchoring protein	BC126407|NRAP|4892|nebulin-related anchoring protein	BC143751|NRAP|4892|nebulin-related anchoring protein	AL831980|NRAP|4892|nebulin-related anchoring protein	AL832025|NRAP|4892|nebulin-related anchoring protein	AL832330|NRAP|4892|nebulin-related anchoring protein	BX640682|NRAP|4892|nebulin-related anchoring protein	AY177620|NRAP|4892|nebulin-related anchoring protein	AY177621|NRAP|4892|nebulin-related anchoring protein	BX641052|NRAP|4892|nebulin-related anchoring protein	BC005933|NRAP|4892|nebulin-related anchoring protein	BC017866|NRAP|4892|nebulin-related anchoring protein	BC058825|NRAP|4892|nebulin-related anchoring protein	BC070130|NRAP|4892|nebulin-related anchoring protein	AK056969|NRAP|4892|nebulin-related anchoring protein	AY081943|NRAP|4892|nebulin-related anchoring protein	NM_006175|NRAP|4892|nebulin-related anchoring protein	NM_198060|NRAP|4892|nebulin-related anchoring protein
hg19_v1_chr17_-_2304217_2304415	0.00756729	LHX3,4.p2	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg19_v1_chr17_-_48207113_48207185	0.00751631	LHX3,4.p2	BC142728|SAMD14|201191|sterile alpha motif domain containing 14	BC136485|SAMD14|201191|sterile alpha motif domain containing 14	AY148482|SAMD14|201191|sterile alpha motif domain containing 14	NM_174920|SAMD14|201191|sterile alpha motif domain containing 14	AK291482|SAMD14|201191|sterile alpha motif domain containing 14	AK094209|SAMD14|201191|sterile alpha motif domain containing 14	AK225767|SAMD14|201191|sterile alpha motif domain containing 14	BC141822|SAMD14|201191|sterile alpha motif domain containing 14
hg19_v1_chrX_-_15333726_15333745	0.00744981	LHX3,4.p2	AF425642|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC069340|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103874|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103875|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537857|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_001201583|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_080873|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg19_v1_chr13_-_103054027_103054123	0.00740442	LHX3,4.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg19_v1_chr5_+_82767492_82767743	0.00738639	LHX3,4.p2	NM_001126336|VCAN|1462|versican	NM_001164097|VCAN|1462|versican	NM_001164098|VCAN|1462|versican	NM_004385|VCAN|1462|versican	U16306|VCAN|1462|versican	U26555|VCAN|1462|versican	X15998|VCAN|1462|versican	AK307642|VCAN|1462|versican	AB209491|VCAN|1462|versican	BC050524|VCAN|1462|versican	D32039|VCAN|1462|versican
hg19_v1_chr10_-_120938276_120938331	0.0072677	LHX3,4.p2	EF036492|PRDX3|10935|peroxiredoxin 3	BT020007|PRDX3|10935|peroxiredoxin 3	CR450344|PRDX3|10935|peroxiredoxin 3	AK222659|PRDX3|10935|peroxiredoxin 3	BC002685|PRDX3|10935|peroxiredoxin 3	D49396|PRDX3|10935|peroxiredoxin 3	BC009601|PRDX3|10935|peroxiredoxin 3	BC059169|PRDX3|10935|peroxiredoxin 3	BC111397|PRDX3|10935|peroxiredoxin 3	AK313169|PRDX3|10935|peroxiredoxin 3	BC008435|PRDX3|10935|peroxiredoxin 3	BC022373|PRDX3|10935|peroxiredoxin 3	AK130897|PRDX3|10935|peroxiredoxin 3	BC007062|PRDX3|10935|peroxiredoxin 3
hg19_v1_chrX_+_119737743_119737834	0.0070447	LHX3,4.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr1_+_10509775_10509775	0.00649788	LHX3,4.p2	AY358561|CORT|1325|cortistatin	NM_001302|CORT|1325|cortistatin
hg19_v1_chr9_-_34620489_34620497	0.00641456	LHX3,4.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr8_-_27101240_27101316	0.00637923	LHX3,4.p2	DQ891040|STMN4|81551|stathmin-like 4	DQ894219|STMN4|81551|stathmin-like 4	AJ303455|STMN4|81551|stathmin-like 4
hg19_v1_chr12_+_18414473_18414473	0.00636955	LHX3,4.p2	NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide
hg19_v1_chr5_-_88179278_88179293	0.00629494	LHX3,4.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr4_+_169013687_169013851	0.00623293	LHX3,4.p2	NM_007193|ANXA10|11199|annexin A10	BC007320|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg19_v1_chr1_-_7913490_7913550	0.00612858	LHX3,4.p2	AF140630|UTS2|10911|urotensin 2	BC126443|UTS2|10911|urotensin 2	BC171734|UTS2|10911|urotensin 2	NM_021995|UTS2|10911|urotensin 2
hg19_v1_chr6_+_151773421_151773421	0.00597238	LHX3,4.p2	AK022972|C6orf211|79624|chromosome 6 open reading frame 211	NM_024573|C6orf211|79624|chromosome 6 open reading frame 211
hg19_v1_chr3_+_149192367_149192437	0.00575448	LHX3,4.p2	NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4
hg19_v1_chrX_-_43832920_43832920	0.0055394	LHX3,4.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg19_v1_chr1_+_57320442_57320574	0.005363	LHX3,4.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide	HQ258328|C8A|731|complement component 8, alpha polypeptide
hg19_v1_chr8_+_123793988_123794000	0.00529798	LHX3,4.p2	BC042145|ZHX2|22882|zinc fingers and homeoboxes 2
hg19_v1_chr14_-_64749530_64749796	0.00525852	LHX3,4.p2	AF074599|ESR2|2100|estrogen receptor 2 (ER beta)	AY438022|ESR2|2100|estrogen receptor 2 (ER beta)	X99101|ESR2|2100|estrogen receptor 2 (ER beta)	DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)	DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)	DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)	DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)	HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)	HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)	AF124790|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)	NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)	AB006590|ESR2|2100|estrogen receptor 2 (ER beta)
hg19_v1_chr7_-_102920840_102920963	0.00517612	LHX3,4.p2	AK097711|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)	BC094802|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)	BC023575|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)
hg19_v1_chr12_-_23737507_23737545	0.00503089	LHX3,4.p2	NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5	AK098610|SOX5|6660|SRY (sex determining region Y)-box 5	AK223536|SOX5|6660|SRY (sex determining region Y)-box 5
hg19_v1_chr2_-_208890207_208890322	0.00492735	LHX3,4.p2	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3	NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3
hg19_v1_chr1_+_92632608_92632608	0.00470154	LHX3,4.p2	NM_015237|KIAA1107|23285|KIAA1107
hg19_v1_chr9_-_99540327_99540380	0.00440428	LHX3,4.p2	AB023189|ZNF510|22869|zinc finger protein 510	NM_014930|ZNF510|22869|zinc finger protein 510	BC036676|ZNF510|22869|zinc finger protein 510	BC068587|ZNF510|22869|zinc finger protein 510	BC058022|ZNF510|22869|zinc finger protein 510	AK292600|ZNF510|22869|zinc finger protein 510
hg19_v1_chr18_+_616671_616719	0.00437723	LHX3,4.p2	DQ980621|CLUL1|27098|clusterin-like 1 (retinal)	NM_199167|CLUL1|27098|clusterin-like 1 (retinal)	AF395889|CLUL1|27098|clusterin-like 1 (retinal)	D63813|CLUL1|27098|clusterin-like 1 (retinal)
hg19_v1_chrX_+_84258831_84258904	0.00432679	LHX3,4.p2	AK130506|APOOL|139322|apolipoprotein O-like	NM_198450|APOOL|139322|apolipoprotein O-like	AY358193|APOOL|139322|apolipoprotein O-like	BC107095|APOOL|139322|apolipoprotein O-like	BC107096|APOOL|139322|apolipoprotein O-like	CR749250|APOOL|139322|apolipoprotein O-like
hg19_v1_chr5_-_149829264_149829318	0.00429379	LHX3,4.p2	BC003401|RPS14|6208|ribosomal protein S14	BC001126|RPS14|6208|ribosomal protein S14	BC006784|RPS14|6208|ribosomal protein S14	BC110792|RPS14|6208|ribosomal protein S14	AK312179|RPS14|6208|ribosomal protein S14	BC091474|RPS14|6208|ribosomal protein S14	NM_001025070|RPS14|6208|ribosomal protein S14	NM_001025071|RPS14|6208|ribosomal protein S14	NM_005617|RPS14|6208|ribosomal protein S14
hg19_v1_chr1_+_87012758_87012925	0.00424598	LHX3,4.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	HQ258531|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg19_v1_chr2_-_169887832_169887832	0.00389827	LHX3,4.p2	AF091582|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_003742|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11
hg19_v1_chr21_-_43735462_43735520	0.00368549	LHX3,4.p2	L08044|TFF3|7033|trefoil factor 3 (intestinal)	DQ891963|TFF3|7033|trefoil factor 3 (intestinal)	DQ895153|TFF3|7033|trefoil factor 3 (intestinal)	L15203|TFF3|7033|trefoil factor 3 (intestinal)	BC017859|TFF3|7033|trefoil factor 3 (intestinal)
hg19_v1_chr5_-_156486128_156486131	0.00357471	LHX3,4.p2	AK298259|HAVCR1|26762|hepatitis A virus cellular receptor 1
hg19_v1_chr11_+_107461807_107461816	0.00339041	LHX3,4.p2	AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1
hg19_v1_chrX_-_138724851_138724999	0.00307627	LHX3,4.p2	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg19_v1_chr11_-_8190535_8190592	0.00284723	LHX3,4.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg19_v1_chr5_-_98262217_98262239	0.00280966	LHX3,4.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg19_v1_chr14_-_101036130_101036130	0.00237429	LHX3,4.p2	BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)	NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)
hg19_v1_chr2_+_234296799_234296799	0.00202165	LHX3,4.p2	D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa	NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa
hg19_v1_chr11_+_59824054_59824119	0.00165864	LHX3,4.p2	NM_001031666|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_001031809|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_006138|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg19_v1_chr12_-_21487831_21487833	0.00165727	LHX3,4.p2	NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2
hg19_v1_chr4_-_113437327_113437337	0.00164317	LHX3,4.p2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg19_v1_chr2_-_167343477_167343480	0.00162127	LHX3,4.p2	BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha
hg19_v1_chr16_-_21663908_21663933	0.00160867	LHX3,4.p2	DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6	DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6	EU176227|IGSF6|10261|immunoglobulin superfamily, member 6	EU176324|IGSF6|10261|immunoglobulin superfamily, member 6	AK313860|IGSF6|10261|immunoglobulin superfamily, member 6	AK223286|IGSF6|10261|immunoglobulin superfamily, member 6	AK290910|IGSF6|10261|immunoglobulin superfamily, member 6	AK293703|IGSF6|10261|immunoglobulin superfamily, member 6	BC017844|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr4_-_122854192_122854267	0.00158685	LHX3,4.p2	AB255423|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	AB255424|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC093682|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC093684|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC143239|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	NM_003305|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3
hg19_v1_chr20_+_42136313_42136375	0.00144346	LHX3,4.p2	NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)	AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)
hg19_v1_chr7_+_134671244_134671327	0.00133911	LHX3,4.p2	AK302827|AGBL3|340351|ATP/GTP binding protein-like 3	NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3	BC030651|AGBL3|340351|ATP/GTP binding protein-like 3	AL832281|AGBL3|340351|ATP/GTP binding protein-like 3	AK023045|AGBL3|340351|ATP/GTP binding protein-like 3
hg19_v1_chr3_-_39322763_39322763	0.00130709	LHX3,4.p2	NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg19_v1_chr12_+_15125955_15125977	0.000882119	LHX3,4.p2	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma
hg19_v1_chrY_+_27768241_27768308	0.000835839	LHX3,4.p2	AK292375|CDY1|9085|chromodomain protein, Y-linked, 1	BC033041|CDY1|9085|chromodomain protein, Y-linked, 1	NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B	NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1	NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1	AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B	AF000981|CDY1|9085|chromodomain protein, Y-linked, 1	AF080597|CDY1|9085|chromodomain protein, Y-linked, 1
hg19_v1_chr14_-_69262959_69263010	0.000690973	LHX3,4.p2	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1
hg19_v1_chr13_-_46626845_46626921	0.000579179	LHX3,4.p2	BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13	AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13	AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13	NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13
hg19_v1_chr1_+_152974222_152974246	0.00051381	LHX3,4.p2	NM_001097589|SPRR3|6707|small proline-rich protein 3	NM_005416|SPRR3|6707|small proline-rich protein 3	AK311823|SPRR3|6707|small proline-rich protein 3	BC017802|SPRR3|6707|small proline-rich protein 3	EF553525|SPRR3|6707|small proline-rich protein 3	AJ243667|SPRR3|6707|small proline-rich protein 3	AY118269|SPRR3|6707|small proline-rich protein 3
hg19_v1_chr10_-_75335415_75335432	0.000287759	LHX3,4.p2	AJ583820|USP54|159195|ubiquitin specific peptidase 54	NM_152586|USP54|159195|ubiquitin specific peptidase 54
hg19_v1_chr1_-_212965104_212965138	0.000197461	LHX3,4.p2	DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)
hg19_v1_chr1_-_216896640_216896813	0.000156638	LHX3,4.p2	HQ692853|ESRRG|2104|estrogen-related receptor gamma	AF117255|ESRRG|2104|estrogen-related receptor gamma	BC008218|ESRRG|2104|estrogen-related receptor gamma	AY388456|ESRRG|2104|estrogen-related receptor gamma	AK291647|ESRRG|2104|estrogen-related receptor gamma	AB020639|ESRRG|2104|estrogen-related receptor gamma	AK290945|ESRRG|2104|estrogen-related receptor gamma	BC064700|ESRRG|2104|estrogen-related receptor gamma	NM_001243515|ESRRG|2104|estrogen-related receptor gamma	NM_001243518|ESRRG|2104|estrogen-related receptor gamma	NM_001243519|ESRRG|2104|estrogen-related receptor gamma	NM_001438|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr11_-_71955216_71955254	0.000146165	LHX3,4.p2	AK290645|PHOX2A|401|paired-like homeobox 2a	NM_005169|PHOX2A|401|paired-like homeobox 2a
hg19_v1_chr19_-_53758107_53758139	7.90007e-05	LHX3,4.p2	BC050038|ZNF677|342926|zinc finger protein 677	NM_182609|ZNF677|342926|zinc finger protein 677	AK308120|ZNF677|342926|zinc finger protein 677	BX648243|ZNF677|342926|zinc finger protein 677
hg19_v1_chrY_+_1660485_1660573	5.91831e-05	LHX3,4.p2	BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A	BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A
hg19_v1_chr19_+_52800424_52800450	4.21451e-05	LHX3,4.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
