ISMARA results for ENCODE cell lines, H3K27me3 (Ernst 2011)

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
RREB1.p2 6.512 RREB1 (HNT)
NRF1.p2 6.358 NRF1 (EWG, ALPHA-PAL)
ELK1,4_GABP{A,B1}.p3 5.144 GABPA (E4TF1A, NFT2, NRF2, E4TF1-60, NRF2A)
GABPB1 (E4TF1-47, GABPB)
ELK4 (SAP1)
ELK1
ZNF143.p2 4.800 ZNF143 (SBF, pHZ-1, STAF)
HIC1.p2 4.741 HIC1 (ZBTB29)
PITX1..3.p2 4.731 PITX2 (IGDS, RS, Brx1, Otlx2, ARP1)
PITX3
PITX1 (PTX1, POTX)
SNAI1..3.p2 4.449 SNAI2 (SLUGH1)
SNAI1 (SNA, SLUGH2, SNAH)
SNAI3 (SMUC, Zfp293)
YY1.p2 4.260 YY1 (NF-E1, DELTA, UCRBP, YIN-YANG-1, INO80S)
REST.p3 4.186 REST (NRSF, XBR)
TFCP2.p2 3.943 TFCP2 (CP2, LSF, LBP-1C, TFCP2C)
TFAP2{A,C}.p2 3.538 TFAP2C (AP2-GAMMA, ERF1, TFAP2G, hAP-2g)
TFAP2A (AP-2)
EHF.p2 3.377 EHF
FOS_FOS{B,L1}_JUN{B,D}.p2 3.341 FOS (c-fos, AP-1)
JUNB
FOSL1 (fra-1)
JUND (AP-1)
FOSB (G0S3, GOSB, GOS3, AP-1, MGC42291, DKFZp686C0818)
HMGA1,2.p2 3.308 HMGA1
HMGA2 (BABL, LIPO)
MZF1.p2 3.295 MZF1 (MZF1B, ZSCAN6, MZF-1, Zfp98)
ZEB1.p2 3.291 ZEB1 (BZP, ZEB, AREB6, NIL-2-A, Zfhep, Zfhx1a)
MTF1.p2 3.273 MTF1
TFAP2B.p2 3.265 TFAP2B (AP2-B)
AHR_ARNT_ARNT2.p2 3.219 ARNT (HIF-1beta, bHLHe2)
AHR
ARNT2 (KIAA0307, bHLHe1)
HOX{A6,A7,B6,B7}.p2 3.075 HOXB6
HOXA7
HOXB7
HOXA6
KLF12.p2 3.030 KLF12 (AP-2rep, HSPC122, AP2REP)
EBF1.p2 3.018 EBF1 (OLF1)
MAZ.p2 2.957 MAZ (ZF87, Pur-1, Zif87, ZNF801)
PAX5.p2 2.903 PAX5 (BSAP)
ZIC1..3.p2 2.847 ZIC1 (ZIC, ZNF201)
ZIC2 (HPE5)
ZIC3 (HTX, ZNF203)
MYFfamily.p2 2.796 MYOD1 (PUM, MYOD, bHLHc1)
MYF6 (MRF4, bHLHc4)
MYF5 (bHLHc2)
MYOG (bHLHc3)
PRRX1,2.p2 2.654 PRRX2 (PRX2, PMX2)
PRRX1 (PHOX1)
NFY{A,B,C}.p2 2.647 NFYC (CBF-C)
NFYB (CBF-A, HAP3)
NFYA (HAP2, CBF-B)
TEAD1.p2 2.635 TEAD1 (TEF-1)
TEAD2 (ETF, TEF4, TEF-4, TEAD-2)
TEAD3 (TEF5, TEAD5, TEF-5, DTEF-1, ETFR-1, TEAD-3)
TEAD4 (TEF3, RTEF1, TEF-3, EFTR-2, TEFR-1, TCF13L1, hRTEF-1B)
ELF1,2,4.p2 2.603 ELF2 (EU32, NERF, NERF-2, NERF-1A, NERF-1B)
ELF1
ELF4 (MEF, ELFR)
ZNF384.p2 2.595 ZNF384 (CAGH1A, CIZ, NMP4, NP)
SP1.p2 2.588 SP1
CREB1.p2 2.561 CREB1
ZNF423.p2 2.537 ZNF423 (KIAA0760, OAZ, Roaz, Ebfaz, Zfp104)
CRX.p2 2.508 CRX (CRD, LCA7, OTX3)
IRF1,2,7.p3 2.504 IRF1 (MAR, IRF-1)
IRF2 (IRF-2, DKFZp686F0244)
IRF7 (IRF7A, IRF-7H)
HMX1.p2 2.498 HMX1 (H6, NKX5-3)
SMAD1..7,9.p2 2.496 SMAD5 (Dwfc, JV5-1)
SMAD1 (MADR1, JV4-1)
SMAD3 (JV15-2, HsT17436)
SMAD4 (DPC4)
SMAD2 (MADR2, JV18-1)
SMAD6 (HsT17432)
SMAD7
SMAD9
GATA1..3.p2 2.466 GATA1 (ERYF1, NFE1)
GATA2 (NFE1B)
GATA3 (HDR)
MYOD1.p2 2.463 MYOD1 (PUM, MYOD, bHLHc1)
NFE2L1.p2 2.433 NFE2L1 (NRF1, LCR-F1, FLJ00380, TCF11)
HNF4A_NR2F1,2.p2 2.425 NR2F1 (EAR-3, COUP-TFI, TCFCOUP1, SVP44)
NR2F2 (COUP-TFII, COUPTFB, SVP40)
HNF4A (NR2A1, HNF4)
TFDP1.p2 2.409 TFDP1 (Dp-1, DRTF1, DP1)
UGUGCUU 2.373 hsa-miR-218
GTF2I.p2 2.355 GTF2I (TFII-I, BAP-135, SPIN, BTKAP1, DIWS, IB291)
NHLH1,2.p2 2.338 NHLH1 (NSCL, NSCL1, bHLHa35)
NHLH2 (NSCL2, bHLHa34)
TLX1..3_NFIC{dimer}.p2 2.336 TLX1
TLX3 (RNX)
KLF4.p3 2.278 KLF4 (EZF, GKLF)
EN1,2.p2 2.262 EN1
EN2
MAFB.p2 2.204 MAFB
EP300.p2 2.194 EP300 (p300, KAT3B)
AAGGCAC 2.187 hsa-miR-124
hsa-miR-506
RUNX1..3.p2 2.179 RUNX1 (PEBP2A2, AMLCR1)
RUNX3 (AML2, PEBP2A3)
RUNX2 (AML3, PEBP2A1, PEBP2aA1)
EGR1..3.p2 2.179 EGR3 (PILOT)
EGR1 (TIS8, G0S30, NGFI-A, KROX-24, ZIF-268, AT225, ZNF225)
EGR2
HBP1_HMGB_SSRP1_UBTF.p2 2.163 HMGB2
HMGB3 (HMG2A, MGC90319)
SSRP1 (FACT80)
UBTF (UBF, NOR-90)
HBP1
IKZF2.p2 2.157 IKZF2 (Helios)
ATF5_CREB3.p2 2.150 ATF5
CREB3 (LZIP, Luman)
HLF.p2 2.146 HLF (MGC33822)
BPTF.p2 2.136 BPTF (FAC1, NURF301)
TCF4_dimer.p2 2.135 TCF4 (E2-2, ITF2, PTHS, SEF2, SEF2-1, SEF2-1A, SEF2-1B, bHLHb19, MGC149723, MGC149724)
ESR1.p2 2.091 ESR1 (NR3A1, Era)
FOX{D1,D2}.p2 2.085 FOXD2 (FREAC9)
FOXD1 (FREAC4)
bHLH_family.p2 2.081 ARNTL (MOP3, JAP3, BMAL1, PASD3, bHLHe5)
MITF (WS2A, MI, bHLHe32)
MXI1 (MXD2, MAD2, MXI, bHLHc11)
TFE3 (TFEA, bHLHe33)
CLOCK (KIAA0334, KAT13D, bHLHe8)
OLIG2 (RACK17, OLIGO2, bHLHe19)
MXD4 (MAD4, MSTP149, MST149, bHLHc12)
HEY2 (bHLHb32)
HEY1 (HESR-1, CHF2, HESR1, HRT-1, CHF-2, HERP2, BHLHb31)
HEYL (bHLHb33)
MLXIPL (WS-bHLH, MIO, CHREBP, MONDOB)
HES6 (bHLHc23)
MXD3 (MAD3, bHLHc13)
ARNTL2 (BMAL2, MOP9, CLIF, PASD9, bHLHe6)
ID1 (dJ857M17.1.2, bHLHb24)
MNT (ROX, MXD6, MAD6, bHLHd3)
OLIG1 (BHLHB6, bHLHe21)
NPAS2 (MOP4, PASD4, bHLHe9)
ETS1,2.p2 2.079 ETS2
ETS1 (FLJ10768, ETS-1)
SPI1.p2 2.075 SPI1 (PU.1, SPI-A, OF, SFPI1, SPI-1)
TFAP4.p2 2.049 TFAP4 (AP-4)
NFATC1..3.p2 2.035 NFATC3 (NFAT4, NFATX)
NFATC2 (NF-ATP, NFATp, NFAT1)
NFATC1 (NF-ATC, NFATc, NFAT2)
NR5A1,2.p2 1.981 NR5A1 (FTZ1, SF-1, ELP, AD4BP)
NR5A2 (FTZ-F1beta, hB1F, LRH-1, FTZ-F1, hB1F-2, B1F2)
DBP.p2 1.978 DBP (DABP)
UCAAGUA 1.959 hsa-miR-26a
hsa-miR-26b
hsa-miR-1297
hsa-miR-4465
E2F1..5.p2 1.949 E2F4 (E2F-4)
E2F5
E2F2 (E2F-2)
E2F1 (RBP3)
E2F3
TBP.p2 1.925 TBP (TFIID)
RXR{A,B,G}.p2 1.902 RXRA (NR2B1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
HAND1,2.p2 1.881 HAND1 (eHand, Thing1, Hxt, bHLHa27)
HAND2 (dHand, Thing2, Hed, bHLHa26)
CAGCAGG 1.871 hsa-miR-214
hsa-miR-761
hsa-miR-3619-5p
SRY.p2 1.850 SRY (TDF)
ONECUT1,2.p2 1.845 ONECUT2 (OC-2)
ONECUT1 (HNF-6)
ZFP161.p2 1.843 ZFP161 (ZNF478, ZBTB14)
MYB.p2 1.835 MYB (c-myb)
PAX2.p2 1.831 PAX2
ZBTB16.p2 1.819 ZBTB16 (PLZF)
SRF.p3 1.809 SRF (MCM1)
AAUACUG 1.798 hsa-miR-200b
hsa-miR-200c
hsa-miR-429
EVI1.p2 1.774 EVI1 (MDS1-EVI1, PRDM3)
STAT2,4,6.p2 1.767 STAT2 (STAT113)
STAT4
STAT6 (D12S1644, IL-4-STAT)
CDX1,2,4.p2 1.737 CDX1
CDX2
CDX4
UUUUUGC 1.736 hsa-miR-129-5p
POU1F1.p2 1.730 POU1F1 (GHF-1)
SOX5.p2 1.721 SOX5 (L-SOX5, MGC35153)
ATF2.p2 1.695 ATF2 (TREB7, CRE-BP1, HB16)
SPZ1.p2 1.657 SPZ1 (NYD-TSP1, FLJ25709)
FOXL1.p2 1.639 FOXL1 (FREAC7, FKH6)
ZNF148.p2 1.637 ZNF148 (BERF-1, ZBP-89, BFCOL1, HT-BETA, ZFP148, pHZ-52)
UGAAAUG 1.632 hsa-miR-203
POU5F1_SOX2{dimer}.p2 1.628 POU5F1 (OCT3, Oct4, MGC22487)
SOX2
NR3C1.p2 1.627 NR3C1 (GR)
RFX1..5_RFXANK_RFXAP.p2 1.623 RFX1 (EF-C)
RFXAP
RFX5
RFXANK (BLS, RFX-B, ANKRA1, F14150_1, MGC138628)
RFX4
RFX3
RFX2 (FLJ14226)
POU5F1.p2 1.622 POU5F1 (OCT3, Oct4, MGC22487)
CTCF.p2 1.595 CTCF
AAAGUGC 1.582 hsa-miR-17
hsa-miR-20a
hsa-miR-20b
hsa-miR-93
hsa-miR-106a
hsa-miR-106b
hsa-miR-519d
NKX3-2.p2 1.571 NKX3-2 (NKX3B, NKX3.2)
FOXN1.p2 1.560 FOXN1 (FKHL20)
ZBTB6.p2 1.552 ZBTB6 (ZID)
ESRRA.p2 1.546 ESRRA (ERR1, ERRalpha, NR3B1, ERRa)
CCAGUGU 1.539 hsa-miR-199a-5p
hsa-miR-199b-5p
BACH2.p2 1.503 BACH2
SPIB.p2 1.493 SPIB (SPI-B)
GUAGUGU 1.484 hsa-miR-142-3p
EOMES.p2 1.480 EOMES (TBR2)
TBX4,5.p2 1.480 TBX5
TBX4
CEBPA,B_DDIT3.p2 1.480 DDIT3 (CHOP10, GADD153, CHOP)
CEBPA (C/EBP-alpha)
CEBPB (LAP, CRP2, NFIL6, IL6DBP)
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2 1.460 ARNT (HIF-1beta, bHLHe2)
MAX (bHLHd4)
MYC (c-Myc, bHLHe39)
USF1 (UEF, MLTFI, bHLHb11)
BHLHB2 (DEC1, bHLHe40)
ARNT2 (KIAA0307, bHLHe1)
TGIF1.p2 1.445 TGIF1
GATA6.p2 1.445 GATA6
GUAAACA 1.443 hsa-miR-30a
hsa-miR-30b
hsa-miR-30c
hsa-miR-30d
hsa-miR-30e
NFKB1_REL_RELA.p2 1.440 RELA (p65)
REL (I-Rel)
NFKB1 (KBF1, p105)
AGCAGCG 1.438 hsa-miR-503
SOX2.p2 1.430 SOX2
GLI1..3.p2 1.430 GLI1
GLI2 (THP2, HPE9, THP1)
GLI3 (PAP-A, PAPA, PAPA1, PAPB, ACLS, PPDIV)
FOXO1,3,4.p2 1.428 FOXO1 (FKH1)
FOXO4 (AFX1)
FOXO3 (AF6q21, FOXO2)
FOXA2.p3 1.412 FOXA2
TLX2.p2 1.399 TLX2 (Enx, Tlx2, NCX)
CUCCCAA 1.397 hsa-miR-150
NR1H4.p2 1.385 NR1H4 (FXR, RIP14, HRR1, HRR-1)
HSF1,2.p2 1.376 HSF1 (HSTF1)
HSF2
GGCAGUG 1.364 hsa-miR-34a
hsa-miR-34c-5p
hsa-miR-449a
hsa-miR-449b
NKX3-1.p2 1.364 NKX3-1 (NKX3.1, BAPX2)
LMO2.p2 1.355 LMO2 (TTG2, RHOM2, RBTN2)
NKX2-2,8.p2 1.351 NKX2-2 (NKX2.2)
NKX2-8 (NKX2.8, Nkx2-9)
ADNP_IRX_SIX_ZHX.p2 1.348 SIX5
ZHX1
IRX4
ADNP (KIAA0784, ADNP1)
ZHX3 (KIAA0395)
ZHX2 (KIAA0854)
IRX5 (IRX-2a)
SIX2
STAT5{A,B}.p2 1.340 STAT5B
STAT5A (MGF)
MEF2{A,B,C,D}.p2 1.335 MEF2A (RSRFC4, RSRFC9)
MEF2C
MEF2D
MEF2BNB-MEF2B (MEF2B, LOC729991-MEF2B)
MEF2B (RSRFR2, FLJ32648)
GTF2A1,2.p2 1.330 GTF2A1 (TFIIA)
GTF2A2 (TFIIA, HsT18745)
HOX{A4,D4}.p2 1.330 HOXA4
HOXD4
POU3F1..4.p2 1.313 POU3F1 (OCT6, SCIP)
POU3F3 (BRN1, OTF8)
POU3F2 (POUF3, BRN2, OCT7)
POU3F4 (BRN4, OTF9)
EWSR1-FLI1.p2 1.311 FLI1 (EWSR2, SIC-1)
EWSR1 (EWS, K984G1.4)
PRDM1.p3 1.311 PRDM1 (PRDI-BF1)
HIF1A.p2 1.303 HIF1A (MOP1, HIF-1alpha, PASD8, HIF1)
PAX4.p2 1.300 PAX4
GFI1B.p2 1.299 GFI1B
FOXD3.p2 1.271 FOXD3 (Genesis, HFH2)
UAUUGCU 1.270 hsa-miR-137
FOXP3.p2 1.264 FOXP3 (JM2, XPID, AIID, PIDX, DIETER, SCURFIN)
ARID5B.p2 1.260 ARID5B (FLJ21150, MRF2)
MYBL2.p2 1.258 MYBL2 (BMYB, B-MYB)
HOX{A5,B5}.p2 1.231 HOXB5
HOXA5
NFE2L2.p2 1.228 NFE2L2 (NRF2)
CDC5L.p2 1.224 CDC5L (PCDC5RP, hCDC5, CEF1)
UGCAUAG 1.221 hsa-miR-153
GFI1.p2 1.221 GFI1
GAGGUAG 1.213 hsa-let-7a
hsa-let-7b
hsa-let-7c
hsa-let-7d
hsa-let-7e
hsa-let-7f
hsa-let-7g
hsa-let-7i
hsa-miR-98
hsa-miR-4458
hsa-miR-4500
AGGUAGU 1.211 hsa-miR-196a
hsa-miR-196b
UCCAGUU 1.210 hsa-miR-145
HNF1A.p2 1.197 HNF1A (HNF1, LFB1)
TP53.p2 1.195 TP53 (p53, LFS1)
AGCAGCA 1.195 hsa-miR-15a
hsa-miR-15b
hsa-miR-16
hsa-miR-195
hsa-miR-424
hsa-miR-497
GGCUCAG 1.193 hsa-miR-24
UUGGCAA 1.182 hsa-miR-182
XBP1.p3 1.165 XBP1
PATZ1.p2 1.154 PATZ1 (MAZR, dJ400N23, ZBTB19, ZSG, RIAZ, PATZ)
CUUUGGU 1.152 hsa-miR-9
NFIL3.p2 1.151 NFIL3 (E4BP4, NFIL3A, NF-IL3A)
AGCUGCC 1.137 hsa-miR-22
HES1.p2 1.128 HES1 (FLJ20408, HES-1, Hes1, bHLHb39)
UUGUUCG 1.116 hsa-miR-375
GUGCAAA 1.115 hsa-miR-19a
hsa-miR-19b
AGCACCA 1.109 hsa-miR-29a
hsa-miR-29b
hsa-miR-29c
AUUGCAC 1.104 hsa-miR-25
hsa-miR-32
hsa-miR-92a
hsa-miR-92b
hsa-miR-363
hsa-miR-367
ATF4.p2 1.099 ATF4 (TAXREB67, CREB-2)
ACAUUCA 1.098 hsa-miR-181a
hsa-miR-181b
hsa-miR-181c
hsa-miR-181d
hsa-miR-4262
RXRG_dimer.p3 1.093 NR1H2 (NER, NER-I, RIP15, LXR-b)
RXRA (NR2B1)
PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
PPARA (hPPAR, NR1C1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
PBX1.p2 1.083 PBX1
FOXQ1.p2 1.082 FOXQ1 (HFH1)
LHX3,4.p2 1.075 LHX3
LHX4 (Gsh4)
DMAP1_NCOR{1,2}_SMARC.p2 1.072 SMARCA1 (SNF2LB, NURF140, ISWI, SWI)
SMARCC2 (BAF170, Rsc8, CRACC2)
SMARCA5 (hSNF2H, hISWI, ISWI)
NCOR1 (N-CoR, hCIT529I10, TRAC1, hN-CoR, KIAA1047, MGC104216)
NCOR2 (SMRT, SMRTE, TRAC-1, CTG26, TNRC14)
DMAP1 (DNMAP1, FLJ11543, KIAA1425, DNMTAP1, EAF2, SWC4)
NANOG{mouse}.p2 1.067 NANOG (FLJ12581, FLJ40451)
AUGGCUU 1.050 hsa-miR-135a
hsa-miR-135b
AAGGUGC 1.048 hsa-miR-18a
hsa-miR-18b
hsa-miR-4735-3p
SOX17.p2 1.048 SOX17
POU6F1.p2 1.044 POU6F1 (BRN5, MPOU, TCFB1)
AIRE.p2 1.041 AIRE (PGA1, APS1)
LEF1_TCF7_TCF7L1,2.p2 1.035 TCF7 (TCF-1)
TCF7L2 (TCF-4)
LEF1 (TCF1ALPHA)
TCF7L1
ZNF238.p2 1.031 ZNF238 (C2H2-171, TAZ-1, RP58, ZBTB18)
FOSL2.p2 1.028 FOSL2 (FRA2, FLJ23306)
AR.p2 1.020 AR (AIS, NR3C4, SMAX1, HUMARA)
GAUUGUC 1.019 hsa-miR-219-5p
hsa-miR-4782-3p
NKX6-1,2.p2 1.019 NKX6-1 (Nkx6.1)
NKX6-2 (NKX6B, GTX, NKX6.1)
IKZF1.p2 1.018 IKZF1 (hIk-1, LyF-1, Hs.54452, IKAROS)
AGUGGUU 1.010 hsa-miR-140-5p
GGAAUGU 1.008 hsa-miR-1
hsa-miR-206
hsa-miR-613
SOX{8,9,10}.p2 1.003 SOX9 (SRA1)
SOX8
SOX10 (DOM, WS4, WS2E)
NKX2-3_NKX2-5.p2 1.003 NKX2-5 (CSX1, NKX2.5, NKX4-1)
NKX2-3 (NKX2.3, CSX3, NKX4-3)
JUN.p2 0.982 JUN (c-Jun, AP-1)
JUND (AP-1)
JUNB
CACAGUG 0.981 hsa-miR-128
ACAGUAC 0.978 hsa-miR-101
NFIX.p2 0.962 NFIX (NF1A)
FOX{F1,F2,J1}.p2 0.962 FOXF2 (FREAC2)
FOXJ1 (HFH-4, HFH4)
FOXF1 (FREAC1)
POU2F1..3.p2 0.957 POU2F2 (OCT2)
POU2F1 (OCT1)
POU2F3 (OCT11, PLA-1, Skn-1a, Epoc-1)
FOX{I1,J2}.p2 0.954 FOXI1 (FREAC6)
FOXJ2 (FHX)
GCUACAU 0.954 hsa-miR-221
hsa-miR-222
AGCUUAU 0.949 hsa-miR-21
hsa-miR-590-5p
RXRA_VDR{dimer}.p2 0.943 VDR (NR1I1)
UCACAUU 0.942 hsa-miR-23a
hsa-miR-23b
hsa-miR-23c
NANOG.p2 0.937 NANOG (FLJ12581, FLJ40451)
AACACUG 0.929 hsa-miR-141
hsa-miR-200a
ALX1.p2 0.925 ALX1
NFE2.p2 0.922 NFE2 (NF-E2)
TAL1_TCF{3,4,12}.p2 0.912 TCF3 (E2A, ITF1, MGC129647, MGC129648, bHLHb21)
TCF4 (SEF2-1B, ITF2, bHLHb19)
TAL1 (SCL, bHLHa17)
TCF12 (HEB, HTF4, HsT17266, bHLHb20)
FEV.p2 0.910 FEV (PET-1, HSRNAFEV)
SREBF1,2.p2 0.896 SREBF1 (SREBP1, bHLHd1)
SREBF2 (SREBP2, bHLHd2)
CCCUGAG 0.880 hsa-miR-125a-5p
hsa-miR-125b
hsa-miR-4319
CAGUGCA 0.876 hsa-miR-148a
hsa-miR-148b
hsa-miR-152
PPARG.p2 0.876 PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
NKX2-1,4.p2 0.876 NKX2-1 (TTF-1)
NKX2-4 (NKX2.4)
ATF6.p2 0.865 ATF6 (ATF6A)
UUGGUCC 0.857 hsa-miR-133a
hsa-miR-133b
GUCAGUU 0.852 hsa-miR-223
GCAGCAU 0.837 hsa-miR-103a
hsa-miR-107
UCACAGU 0.830 hsa-miR-27a
hsa-miR-27b
FOX{C1,C2}.p2 0.785 FOXC1 (FREAC3, ARA, IGDA, IHG1)
FOXC2 (MFH-1)
T.p2 0.782 T
TFEB.p2 0.770 TFEB
AAGUGCU 0.769 hsa-miR-302a
hsa-miR-302b
hsa-miR-302c
hsa-miR-302d
hsa-miR-302e
hsa-miR-372
hsa-miR-373
hsa-miR-520a-3p
hsa-miR-520b
hsa-miR-520c-3p
hsa-miR-520d-3p
hsa-miR-520e
UCCCUUU 0.763 hsa-miR-204
hsa-miR-211
GCUGGUG 0.762 hsa-miR-138
CCUUCAU 0.739 hsa-miR-205
UGCAUUG 0.731 hsa-miR-33a
hsa-miR-33b
AGUGCAA 0.725 hsa-miR-130a
hsa-miR-130b
hsa-miR-301a
hsa-miR-301b
hsa-miR-454
hsa-miR-3666
hsa-miR-4295
AAUGCCC 0.717 hsa-miR-365
MSX1,2.p2 0.703 MSX1 (HYD1, OFC5)
MSX2 (CRS2, FPP, HOX8, MSH, PFM)
AACAGUC 0.702 hsa-miR-132
hsa-miR-212
GAGAUGA 0.696 hsa-miR-143
hsa-miR-4770
AUGUGCC 0.673 hsa-miR-455-5p
GGAAGAC 0.665 hsa-miR-7
NR6A1.p2 0.664 NR6A1 (GCNF1, RTR)
ACCCUGU 0.664 hsa-miR-10a
hsa-miR-10b
GGCAAGA 0.657 hsa-miR-31
UUGGCAC 0.654 hsa-miR-96
hsa-miR-1271
AUGGCAC 0.646 hsa-miR-183
RBPJ.p2 0.639 RBPJ (SUH, IGKJRB, RBPJK, KBF2, RBP-J, CBF1)
HOXA9_MEIS1.p2 0.635 MEIS1
HOXA9
ACAGUAU 0.629 hsa-miR-144
PDX1.p2 0.629 PDX1 (IDX-1, STF-1, PDX-1, MODY4)
STAT1,3.p3 0.629 STAT1 (STAT91, ISGF-3)
STAT3 (APRF)
CCAGCAU 0.627 hsa-miR-338-3p
RORA.p2 0.616 RORA (RZRA, ROR1, ROR2, ROR3, NR1F1)
GUAACAG 0.600 hsa-miR-194
CUX2.p2 0.598 CUX2 (KIAA0293, CDP2)
UAAUGCU 0.597 hsa-miR-155
UAAGACG 0.580 hsa-miR-208a
hsa-miR-208b
PAX6.p2 0.579 PAX6 (D11S812E, AN, WAGR)
UAAGACU 0.538 hsa-miR-499-5p
GAGAACU 0.532 hsa-miR-146a
hsa-miR-146b-5p
CUACAGU 0.527 hsa-miR-139-5p
CGUGUCU 0.495 hsa-miR-187
AUGACAC 0.493 hsa-miR-425
GAUAUGU 0.461 hsa-miR-190
hsa-miR-190b
AAUCUCU 0.408 hsa-miR-216b
VSX1,2.p2 0.403 VSX2 (RET1)
VSX1 (PPD)
AACGGAA 0.395 hsa-miR-191
GAUCAGA 0.391 hsa-miR-383
AAUCUCA 0.361 hsa-miR-216a
AACCUGG 0.348 hsa-miR-490-3p
UGUGCGU 0.314 hsa-miR-210
GGACGGA 0.293 hsa-miR-184
ACUGGCC 0.289 hsa-miR-193a-3p
hsa-miR-193b
GZF1.p2 0.277 GZF1 (dJ322G13.2, ZBTB23)
CGUACCG 0.273 hsa-miR-126
ACUGCAU 0.272 hsa-miR-217
GGAGUGU 0.261 hsa-miR-122
PAX3,7.p2 0.183 PAX7 (Hup1)
PAX3 (HUP2)
UGACCUA 0.176 hsa-miR-192
hsa-miR-215
AACCGUU 0.143 hsa-miR-451
PAX8.p2 0.134 PAX8
ACCCGUA 0.023 hsa-miR-99a
hsa-miR-99b
hsa-miR-100

All samples sorted alphabetically


Your email address:
Project name:

Sample name Condition Replicate/Batch ChIP-Seq tools
Rep1_GM12878 ChIP-Cor link, ChIP-Peak link
Rep1_HepG2 ChIP-Cor link, ChIP-Peak link
Rep1_HMEC ChIP-Cor link, ChIP-Peak link
Rep1_HSMM ChIP-Cor link, ChIP-Peak link
Rep1_Huvec ChIP-Cor link, ChIP-Peak link
Rep1_K562 ChIP-Cor link, ChIP-Peak link
Rep1_NHEK ChIP-Cor link, ChIP-Peak link
Rep1_NHLF ChIP-Cor link, ChIP-Peak link
Rep2_GM12878 ChIP-Cor link, ChIP-Peak link
Rep2_HepG2 ChIP-Cor link, ChIP-Peak link
Rep2_HMEC ChIP-Cor link, ChIP-Peak link
Rep2_HSMM ChIP-Cor link, ChIP-Peak link
Rep2_Huvec ChIP-Cor link, ChIP-Peak link
Rep2_K562 ChIP-Cor link, ChIP-Peak link
Rep2_NHEK ChIP-Cor link, ChIP-Peak link
Rep2_NHLF ChIP-Cor link, ChIP-Peak link