hg18_v1_chr2_-_213723298_213723302	1.11317	AAGUGCU	AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr12_+_4253143_4253467	1.03628	AAGUGCU	NM_001759|CCND2|894|cyclin D2	AK223577|CCND2|894|cyclin D2	D13639|CCND2|894|cyclin D2	BC089384|CCND2|894|cyclin D2	BC010958|CCND2|894|cyclin D2	AK291146|CCND2|894|cyclin D2	X68452|CCND2|894|cyclin D2	M90813|CCND2|894|cyclin D2	DQ892845|CCND2|894|cyclin D2	DQ896091|CCND2|894|cyclin D2	BT019847|CCND2|894|cyclin D2
hg18_v1_chr1_-_205290921_205291044	0.83248	AAGUGCU	AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)
hg18_v1_chr2_-_72228427_72228473	0.827391	AAGUGCU	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1	AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1
hg18_v1_chr1_+_144149794_144150272	0.795478	AAGUGCU	NM_006472|TXNIP|10628|thioredoxin interacting protein	AK301203|TXNIP|10628|thioredoxin interacting protein	BX537824|TXNIP|10628|thioredoxin interacting protein	AK226090|TXNIP|10628|thioredoxin interacting protein	S73591|TXNIP|10628|thioredoxin interacting protein	BC093702|TXNIP|10628|thioredoxin interacting protein	BC093704|TXNIP|10628|thioredoxin interacting protein	AY594328|TXNIP|10628|thioredoxin interacting protein	BC024305|TXNIP|10628|thioredoxin interacting protein	AK301148|TXNIP|10628|thioredoxin interacting protein
hg18_v1_chr14_+_70178126_70178599	0.717472	AAGUGCU	D86980|TTC9|23508|tetratricopeptide repeat domain 9	NM_015351|TTC9|23508|tetratricopeptide repeat domain 9	CR616110|TTC9|23508|tetratricopeptide repeat domain 9	BC047950|TTC9|23508|tetratricopeptide repeat domain 9
hg18_v1_chr10_-_43082372_43082372	0.706564	AAGUGCU	BC022548|RASGEF1A|221002|RasGEF domain family, member 1A	NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A
hg18_v1_chr10_-_14412813_14412900	0.700258	AAGUGCU	AK289693|FRMD4A|55691|FERM domain containing 4A	NM_018027|FRMD4A|55691|FERM domain containing 4A	AB037715|FRMD4A|55691|FERM domain containing 4A	BC151244|FRMD4A|55691|FERM domain containing 4A
hg18_v1_chr18_+_40514772_40514961	0.689715	AAGUGCU	AB007897|SETBP1|26040|SET binding protein 1	BC146776|SETBP1|26040|SET binding protein 1	NM_015559|SETBP1|26040|SET binding protein 1
hg18_v1_chr12_-_56418295_56418295	0.677095	AAGUGCU	AY128689|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	NM_001122772|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
hg18_v1_chr1_-_224143389_224143473	0.664375	AAGUGCU	DQ896626|LEFTY1|10637|left-right determination factor 1	AY358873|LEFTY1|10637|left-right determination factor 1	BC027883|LEFTY1|10637|left-right determination factor 1	AF081512|LEFTY1|10637|left-right determination factor 1	NM_020997|LEFTY1|10637|left-right determination factor 1	AK309263|LEFTY1|10637|left-right determination factor 1	AK129605|LEFTY1|10637|left-right determination factor 1	AK222714|LEFTY1|10637|left-right determination factor 1	AK313115|LEFTY1|10637|left-right determination factor 1
hg18_v1_chr1_+_26310854_26310999	0.64838	AAGUGCU	AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like	NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like	AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like	BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like
hg18_v1_chr6_+_33530297_33530404	0.622666	AAGUGCU	AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9	AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9	NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9	BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9	CR605806|ZBTB9|221504|zinc finger and BTB domain containing 9
hg18_v1_chr2_-_73350103_73350265	0.603769	AAGUGCU	AB075820|FBXO41|150726|F-box protein 41	NM_001080410|FBXO41|150726|F-box protein 41
hg18_v1_chr14_+_23700261_23700371	0.603121	AAGUGCU	NM_006084|IRF9|10379|interferon regulatory factor 9	AK308347|IRF9|10379|interferon regulatory factor 9	CR619285|IRF9|10379|interferon regulatory factor 9	CR603020|IRF9|10379|interferon regulatory factor 9	CR609755|IRF9|10379|interferon regulatory factor 9	AK295467|IRF9|10379|interferon regulatory factor 9	M87503|IRF9|10379|interferon regulatory factor 9
hg18_v1_chr6_-_143307976_143308066	0.595736	AAGUGCU	CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2	NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2
hg18_v1_chr13_+_48582389_48582525	0.569212	AAGUGCU	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg18_v1_chr5_+_49997489_49997489	0.564052	AAGUGCU	AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8
hg18_v1_chr20_+_30329096_30329199	0.556126	AAGUGCU	NM_004798|KIF3B|9371|kinesin family member 3B	AB002357|KIF3B|9371|kinesin family member 3B
hg18_v1_chr20_-_4752067_4752321	0.546653	AAGUGCU	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr14_-_91576037_91576170	0.543107	AAGUGCU	BC146845|TRIP11|9321|thyroid hormone receptor interactor 11	AF007217|TRIP11|9321|thyroid hormone receptor interactor 11	BC002656|TRIP11|9321|thyroid hormone receptor interactor 11	BC069008|TRIP11|9321|thyroid hormone receptor interactor 11	Y12490|TRIP11|9321|thyroid hormone receptor interactor 11	AK307489|TRIP11|9321|thyroid hormone receptor interactor 11	NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11
hg18_v1_chr17_-_44006808_44006847	0.542127	AAGUGCU	NM_002146|HOXB3|3213|homeobox B3	AK027609|HOXB3|3213|homeobox B3
hg18_v1_chr11_-_101828563_101829084	0.53489	AAGUGCU	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr16_+_19032744_19032754	0.532579	AAGUGCU	AK096327|ITPRIPL2|162073|inositol 1,4,5-triphosphate receptor interacting protein-like 2	NM_001034841|ITPRIPL2|162073|inositol 1,4,5-triphosphate receptor interacting protein-like 2
hg18_v1_chr22_-_37425937_37426404	0.530322	AAGUGCU	CR456923|JOSD1|9929|Josephin domain containing 1	CU013023|JOSD1|9929|Josephin domain containing 1	CU013311|JOSD1|9929|Josephin domain containing 1	CR456473|JOSD1|9929|Josephin domain containing 1	AK291827|JOSD1|9929|Josephin domain containing 1	BC015026|JOSD1|9929|Josephin domain containing 1	D31884|JOSD1|9929|Josephin domain containing 1	CR596979|JOSD1|9929|Josephin domain containing 1	NM_014876|JOSD1|9929|Josephin domain containing 1
hg18_v1_chr1_-_25129354_25129393	0.523278	AAGUGCU	AJ001432|RUNX3|864|runt-related transcription factor 3	NM_004350|RUNX3|864|runt-related transcription factor 3
hg18_v1_chr6_+_11646472_11646496	0.521839	AAGUGCU	NM_001100829|TMEM170B|100113407|transmembrane protein 170B
hg18_v1_chr3_-_172660545_172660985	0.514442	AAGUGCU	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase	AF172265|TNIK|23043|TRAF2 and NCK interacting kinase	AF172266|TNIK|23043|TRAF2 and NCK interacting kinase	AF172267|TNIK|23043|TRAF2 and NCK interacting kinase	AF172268|TNIK|23043|TRAF2 and NCK interacting kinase	AF172269|TNIK|23043|TRAF2 and NCK interacting kinase	AF172270|TNIK|23043|TRAF2 and NCK interacting kinase	AF172271|TNIK|23043|TRAF2 and NCK interacting kinase	AB011123|TNIK|23043|TRAF2 and NCK interacting kinase	BC150256|TNIK|23043|TRAF2 and NCK interacting kinase	BC018093|TNIK|23043|TRAF2 and NCK interacting kinase	AK291056|TNIK|23043|TRAF2 and NCK interacting kinase	NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase	NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase	NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase	NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase	NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase	NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase	NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase	NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase
hg18_v1_chr2_-_96174865_96174908	0.50494	AAGUGCU	CR609480|DUSP2|1844|dual specificity phosphatase 2	BC007771|DUSP2|1844|dual specificity phosphatase 2	CR614078|DUSP2|1844|dual specificity phosphatase 2	CR613393|DUSP2|1844|dual specificity phosphatase 2	L11329|DUSP2|1844|dual specificity phosphatase 2	NM_004418|DUSP2|1844|dual specificity phosphatase 2
hg18_v1_chr22_+_38903825_38904066	0.502763	AAGUGCU	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr2_-_68332985_68333213	0.502645	AAGUGCU	AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha	AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha	BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha	NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha
hg18_v1_chr3_-_122747470_122747546	0.496198	AAGUGCU	AB209867|POLQ|10721|polymerase (DNA directed), theta	CR936627|POLQ|10721|polymerase (DNA directed), theta	AY338826|POLQ|10721|polymerase (DNA directed), theta	NM_199420|POLQ|10721|polymerase (DNA directed), theta
hg18_v1_chr11_-_109672401_109672646	0.489051	AAGUGCU	BC002626|RDX|5962|radixin	BC020751|RDX|5962|radixin	BC047109|RDX|5962|radixin	AK312903|RDX|5962|radixin	AK316061|RDX|5962|radixin	DQ916738|RDX|5962|radixin	DQ916739|RDX|5962|radixin	DQ916740|RDX|5962|radixin	DQ916741|RDX|5962|radixin	DQ916742|RDX|5962|radixin	NM_002906|RDX|5962|radixin
hg18_v1_chr3_-_12983959_12984257	0.479373	AAGUGCU	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1	NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1
hg18_v1_chr10_-_45410197_45410403	0.477982	AAGUGCU	BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8	NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8	NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8
hg18_v1_chr4_+_57468792_57468833	0.477134	AAGUGCU	NM_005612|REST|5978|RE1-silencing transcription factor
hg18_v1_chr10_-_23043449_23043543	0.47388	AAGUGCU	BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
hg18_v1_chr20_-_4743768_4743768	0.467454	AAGUGCU	AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr2_-_213724577_213724577	0.460606	AAGUGCU	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr1_-_152162074_152162076	0.455255	AAGUGCU	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chr2_-_174538675_174538675	0.453739	AAGUGCU	AY441957|SP3|6670|Sp3 transcription factor	NM_001172712|SP3|6670|Sp3 transcription factor	NM_003111|SP3|6670|Sp3 transcription factor
hg18_v1_chr2_+_202949289_202949294	0.446059	AAGUGCU	NM_001204|BMPR2|659|bone morphogenetic protein receptor, type II (serine/threonine kinase)
hg18_v1_chr16_+_67778441_67778618	0.437645	AAGUGCU	BC031058|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	AF243385|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	NM_006750|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	U40572|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	BC048215|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	EU831451|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	EU831538|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg18_v1_chr20_+_32755778_32755951	0.437554	AAGUGCU	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chr10_-_94040779_94040854	0.430671	AAGUGCU	BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg18_v1_chr2_+_96845704_96846715	0.422219	AAGUGCU	BC037272|CNNM3|26505|cyclin M3	AK126847|CNNM3|26505|cyclin M3	NM_017623|CNNM3|26505|cyclin M3	NM_199078|CNNM3|26505|cyclin M3	BC007199|CNNM3|26505|cyclin M3	AF216965|CNNM3|26505|cyclin M3	AK000025|CNNM3|26505|cyclin M3
hg18_v1_chr17_-_33043514_33043613	0.421605	AAGUGCU	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr20_-_9767406_9767728	0.419042	AAGUGCU	AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7	AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7
hg18_v1_chr1_-_84928473_84928855	0.416543	AAGUGCU	AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	CR613292|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein	NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein
hg18_v1_chr9_-_124030770_124030969	0.416124	AAGUGCU	BC103936|LHX6|26468|LIM homeobox 6	BC103937|LHX6|26468|LIM homeobox 6	BC103938|LHX6|26468|LIM homeobox 6	AL136570|LHX6|26468|LIM homeobox 6	NM_014368|LHX6|26468|LIM homeobox 6	NM_199160|LHX6|26468|LIM homeobox 6	AK299709|LHX6|26468|LIM homeobox 6
hg18_v1_chr15_-_81037554_81037627	0.415281	AAGUGCU	BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1
hg18_v1_chr2_+_102602579_102602651	0.414323	AAGUGCU	BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2	NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2	AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2
hg18_v1_chr5_+_49998528_49998569	0.412213	AAGUGCU	NM_001178056|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	NM_024615|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	AK289369|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	AL834477|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	BC075801|PARP8|79668|poly (ADP-ribose) polymerase family, member 8
hg18_v1_chr2_-_55500450_55500566	0.412171	AAGUGCU	BC014905|CCDC88A|55704|coiled-coil domain containing 88A	BC041160|CCDC88A|55704|coiled-coil domain containing 88A	BC142646|CCDC88A|55704|coiled-coil domain containing 88A	BC142700|CCDC88A|55704|coiled-coil domain containing 88A	AK025723|CCDC88A|55704|coiled-coil domain containing 88A	NM_001135597|CCDC88A|55704|coiled-coil domain containing 88A	NM_018084|CCDC88A|55704|coiled-coil domain containing 88A
hg18_v1_chr2_-_172458970_172459089	0.410595	AAGUGCU	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg18_v1_chr12_-_16650697_16650731	0.410463	AAGUGCU	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	CR598247|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr12_-_56422120_56422208	0.406902	AAGUGCU	AF413077|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	BC028020|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AK292672|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	AF384128|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	NM_014770|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	D79989|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
hg18_v1_chr22_+_38770610_38771101	0.406271	AAGUGCU	NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr7_+_119700924_119700957	0.405603	AAGUGCU	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2
hg18_v1_chr11_-_107969554_107969674	0.398425	AAGUGCU	BC113119|EXPH5|23086|exophilin 5	BC117701|EXPH5|23086|exophilin 5	AY099469|EXPH5|23086|exophilin 5	NM_015065|EXPH5|23086|exophilin 5	AB014524|EXPH5|23086|exophilin 5
hg18_v1_chr17_-_51164443_51164480	0.395217	AAGUGCU	AK095175|TMEM100|55273|transmembrane protein 100	NM_001099640|TMEM100|55273|transmembrane protein 100
hg18_v1_chr1_-_224195495_224195814	0.380914	AAGUGCU	U81523|LEFTY2|7044|left-right determination factor 2	CR603549|LEFTY2|7044|left-right determination factor 2	AF081513|LEFTY2|7044|left-right determination factor 2	BC035718|LEFTY2|7044|left-right determination factor 2	AK027520|LEFTY2|7044|left-right determination factor 2	AK075344|LEFTY2|7044|left-right determination factor 2	AK304549|LEFTY2|7044|left-right determination factor 2	CR591831|LEFTY2|7044|left-right determination factor 2	NM_001172425|LEFTY2|7044|left-right determination factor 2	NM_003240|LEFTY2|7044|left-right determination factor 2	BC065929|LEFTY2|7044|left-right determination factor 2
hg18_v1_chr9_-_23816062_23816062	0.37782	AAGUGCU	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr20_+_42537927_42537995	0.374963	AAGUGCU	BC003071|TTPAL|79183|tocopherol (alpha) transfer protein-like	NM_001039199|TTPAL|79183|tocopherol (alpha) transfer protein-like	NM_024331|TTPAL|79183|tocopherol (alpha) transfer protein-like	AK314045|TTPAL|79183|tocopherol (alpha) transfer protein-like	CR936621|TTPAL|79183|tocopherol (alpha) transfer protein-like
hg18_v1_chr10_+_94040838_94041231	0.370591	AAGUGCU	AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	CR622689|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	CR618394|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	CR616758|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5
hg18_v1_chr1_-_85439315_85439341	0.366426	AAGUGCU	NM_032184|SYDE2|84144|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
hg18_v1_chr12_+_109956210_109956300	0.366151	AAGUGCU	BC151245|CUX2|23316|cut-like homeobox 2	NM_015267|CUX2|23316|cut-like homeobox 2	AB006631|CUX2|23316|cut-like homeobox 2	AF271236|CUX2|23316|cut-like homeobox 2
hg18_v1_chr13_+_21143083_21143214	0.365353	AAGUGCU	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg18_v1_chr19_+_4353658_4353775	0.363597	AAGUGCU	BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)
hg18_v1_chr2_+_203901160_203901600	0.360037	AAGUGCU	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr10_+_92970302_92970474	0.357524	AAGUGCU	NM_032373|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr10_-_61139328_61140132	0.352541	AAGUGCU	AK126643|LOC100129721|100129721|hypothetical protein LOC100129721	NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)
hg18_v1_chr1_-_45729382_45729458	0.348945	AAGUGCU	BX648441|TESK2|10420|testis-specific kinase 2	AK027573|TESK2|10420|testis-specific kinase 2	AK294172|TESK2|10420|testis-specific kinase 2	BC022194|TESK2|10420|testis-specific kinase 2	AB057597|TESK2|10420|testis-specific kinase 2	AJ132545|TESK2|10420|testis-specific kinase 2	AK299269|TESK2|10420|testis-specific kinase 2	NM_007170|TESK2|10420|testis-specific kinase 2	AK302494|TESK2|10420|testis-specific kinase 2
hg18_v1_chr12_-_16652202_16652290	0.348431	AAGUGCU	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr3_-_166397142_166397257	0.345745	AAGUGCU	BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3	AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3	NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3
hg18_v1_chr3_-_101077605_101077757	0.341722	AAGUGCU	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr6_+_1335067_1335181	0.340114	AAGUGCU	NM_001452|FOXF2|2295|forkhead box F2	U13220|FOXF2|2295|forkhead box F2
hg18_v1_chr1_+_28568643_28568981	0.338938	AAGUGCU	NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4	CR749449|PHACTR4|65979|phosphatase and actin regulator 4	AK025436|PHACTR4|65979|phosphatase and actin regulator 4	BC029266|PHACTR4|65979|phosphatase and actin regulator 4	BC016152|PHACTR4|65979|phosphatase and actin regulator 4	BC068508|PHACTR4|65979|phosphatase and actin regulator 4
hg18_v1_chr20_-_604822_604822	0.334561	AAGUGCU	AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)	NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)
hg18_v1_chr17_-_2250967_2251165	0.328246	AAGUGCU	X96401|MNT|4335|MAX binding protein	NM_020310|MNT|4335|MAX binding protein	AK291596|MNT|4335|MAX binding protein
hg18_v1_chr16_-_1369613_1369720	0.328128	AAGUGCU	BC000150|UNKL|64718|unkempt homolog (Drosophila)-like	AK027013|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193389|UNKL|64718|unkempt homolog (Drosophila)-like	NM_023076|UNKL|64718|unkempt homolog (Drosophila)-like
hg18_v1_chr9_-_23811477_23811477	0.322032	AAGUGCU	BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr1_-_42574116_42574166	0.320485	AAGUGCU	AK027075|FOXJ3|22887|forkhead box J3	NM_001198850|FOXJ3|22887|forkhead box J3
hg18_v1_chr12_+_70952729_70952813	0.32044	AAGUGCU	AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme
hg18_v1_chr14_-_67353046_67353059	0.317161	AAGUGCU	AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26	AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26	BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26	CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26	CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26	AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26	NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26
hg18_v1_chr20_-_47327998_47328162	0.315189	AAGUGCU	BC030789|ZNFX1|57169|zinc finger, NFX1-type containing 1	NM_021035|ZNFX1|57169|zinc finger, NFX1-type containing 1
hg18_v1_chr2_+_138975819_138975908	0.313245	AAGUGCU	NM_001001664|SPOPL|339745|speckle-type POZ protein-like	BC071613|SPOPL|339745|speckle-type POZ protein-like
hg18_v1_chr7_+_106596641_106596710	0.310328	AAGUGCU	AK295910|HBP1|26959|HMG-box transcription factor 1	AK298504|HBP1|26959|HMG-box transcription factor 1	BC017069|HBP1|26959|HMG-box transcription factor 1	NM_012257|HBP1|26959|HMG-box transcription factor 1	CR590649|HBP1|26959|HMG-box transcription factor 1
hg18_v1_chr12_+_4889309_4889333	0.310126	AAGUGCU	NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)
hg18_v1_chr9_-_23811842_23811847	0.309242	AAGUGCU	BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr2_-_136590210_136590327	0.304618	AAGUGCU	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg18_v1_chr5_-_56283672_56283730	0.300169	AAGUGCU	BX537798|MIER3|166968|mesoderm induction early response 1, family member 3	BX640907|MIER3|166968|mesoderm induction early response 1, family member 3	CR749246|MIER3|166968|mesoderm induction early response 1, family member 3	CR749805|MIER3|166968|mesoderm induction early response 1, family member 3	BX647359|MIER3|166968|mesoderm induction early response 1, family member 3	BX648294|MIER3|166968|mesoderm induction early response 1, family member 3	BC041348|MIER3|166968|mesoderm induction early response 1, family member 3	NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3
hg18_v1_chr4_-_44423275_44423368	0.299028	AAGUGCU	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2
hg18_v1_chr14_-_34253473_34253779	0.298152	AAGUGCU	CR605888|CFL2|1073|cofilin 2 (muscle)	CR600914|CFL2|1073|cofilin 2 (muscle)	AF134803|CFL2|1073|cofilin 2 (muscle)	CR620328|CFL2|1073|cofilin 2 (muscle)	BC022364|CFL2|1073|cofilin 2 (muscle)	BC022876|CFL2|1073|cofilin 2 (muscle)	BC025683|CFL2|1073|cofilin 2 (muscle)	NM_138638|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr8_+_64243662_64243735	0.297012	AAGUGCU	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr9_+_128607081_128607181	0.296226	AAGUGCU	NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43	NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43	AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43	AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43	BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43
hg18_v1_chr3_-_198948110_198948256	0.295507	AAGUGCU	BC033615|KIAA0226|9711|KIAA0226	NM_014687|KIAA0226|9711|KIAA0226
hg18_v1_chr2_-_25048276_25048466	0.293478	AAGUGCU	AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27
hg18_v1_chr17_-_35337288_35337428	0.290917	AAGUGCU	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	CR620858|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)
hg18_v1_chr13_-_25694343_25694507	0.289485	AAGUGCU	AF293342|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010346|RNF6|6049|ring finger protein (C3H2C3 type) 6	CR749238|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK312435|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_005977|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr8_-_37876129_37876190	0.288901	AAGUGCU	AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)	NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)
hg18_v1_chr17_-_41626032_41626140	0.287091	AAGUGCU	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr1_+_75366706_75366709	0.286877	AAGUGCU	NM_001001933|LHX8|431707|LIM homeobox 8	BC040321|LHX8|431707|LIM homeobox 8
hg18_v1_chr2_-_131567458_131567478	0.285961	AAGUGCU	BC066347|FAM168B|130074|family with sequence similarity 168, member B	BC110642|FAM168B|130074|family with sequence similarity 168, member B	NM_001009993|FAM168B|130074|family with sequence similarity 168, member B
hg18_v1_chr3_+_43303005_43303141	0.284371	AAGUGCU	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr1_-_119991912_119991912	0.28141	AAGUGCU	NM_001080470|ZNF697|90874|zinc finger protein 697
hg18_v1_chr5_+_56146656_56146656	0.278802	AAGUGCU	NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1
hg18_v1_chr10_-_21854616_21854616	0.27832	AAGUGCU	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg18_v1_chr4_-_109307325_109307401	0.276361	AAGUGCU	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr17_+_582406_582666	0.274995	AAGUGCU	AF477201|FAM57A|79850|family with sequence similarity 57, member A	BC026023|FAM57A|79850|family with sequence similarity 57, member A	AK025935|FAM57A|79850|family with sequence similarity 57, member A	AK292065|FAM57A|79850|family with sequence similarity 57, member A	NM_024792|FAM57A|79850|family with sequence similarity 57, member A	AK125146|FAM57A|79850|family with sequence similarity 57, member A
hg18_v1_chr13_+_77213295_77213519	0.273668	AAGUGCU	NM_144595|SLAIN1|122060|SLAIN motif family, member 1	AL834203|SLAIN1|122060|SLAIN motif family, member 1	AK289600|SLAIN1|122060|SLAIN motif family, member 1	BC045177|SLAIN1|122060|SLAIN motif family, member 1	AK289714|SLAIN1|122060|SLAIN motif family, member 1	AK295423|SLAIN1|122060|SLAIN motif family, member 1
hg18_v1_chr3_+_85090721_85090917	0.272757	AAGUGCU	BC105999|CADM2|253559|cell adhesion molecule 2	NM_001167674|CADM2|253559|cell adhesion molecule 2	NM_001167675|CADM2|253559|cell adhesion molecule 2	AK295885|CADM2|253559|cell adhesion molecule 2	AL834270|CADM2|253559|cell adhesion molecule 2
hg18_v1_chr16_+_83618804_83618939	0.272733	AAGUGCU	AK299892|KIAA0513|9764|KIAA0513	CR617707|KIAA0513|9764|KIAA0513	BC030280|KIAA0513|9764|KIAA0513	NM_014732|KIAA0513|9764|KIAA0513
hg18_v1_chr16_-_69880591_69881013	0.272603	AAGUGCU	BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1	AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1	BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1	AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1	NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1	AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1	NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1	BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1
hg18_v1_chr3_+_153499883_153499883	0.267305	AAGUGCU	NM_207293|MBNL1|4154|muscleblind-like (Drosophila)	NM_207294|MBNL1|4154|muscleblind-like (Drosophila)	NM_207295|MBNL1|4154|muscleblind-like (Drosophila)	NM_207296|MBNL1|4154|muscleblind-like (Drosophila)	NM_207297|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr14_+_34585098_34585469	0.265318	AAGUGCU	AK096173|FAM177A1|283635|family with sequence similarity 177, member A1	BC029559|FAM177A1|283635|family with sequence similarity 177, member A1	BX640884|FAM177A1|283635|family with sequence similarity 177, member A1	CR749796|FAM177A1|283635|family with sequence similarity 177, member A1	NM_173607|FAM177A1|283635|family with sequence similarity 177, member A1	BX640984|FAM177A1|283635|family with sequence similarity 177, member A1	AL833508|FAM177A1|283635|family with sequence similarity 177, member A1
hg18_v1_chr21_-_42247007_42247298	0.26412	AAGUGCU	AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2	AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2	NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2
hg18_v1_chr17_-_40750109_40750208	0.260648	AAGUGCU	BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14	BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14	AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14	AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14	NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14
hg18_v1_chr2_-_213111525_213111596	0.260539	AAGUGCU	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg18_v1_chr1_-_38097811_38097879	0.259574	AAGUGCU	X78710|MTF1|4520|metal-regulatory transcription factor 1	AK225923|MTF1|4520|metal-regulatory transcription factor 1	AK298751|MTF1|4520|metal-regulatory transcription factor 1	AK309584|MTF1|4520|metal-regulatory transcription factor 1	AK314233|MTF1|4520|metal-regulatory transcription factor 1	BC014454|MTF1|4520|metal-regulatory transcription factor 1	NM_005955|MTF1|4520|metal-regulatory transcription factor 1
hg18_v1_chr11_+_117812282_117812437	0.258059	AAGUGCU	D14540|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	NM_001197104|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	NM_005933|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	L04284|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)
hg18_v1_chr9_+_76302071_76302118	0.256045	AAGUGCU	NM_006914|RORB|6096|RAR-related orphan receptor B	BC051830|RORB|6096|RAR-related orphan receptor B	Y08639|RORB|6096|RAR-related orphan receptor B
hg18_v1_chr2_-_196744546_196744580	0.253781	AAGUGCU	NM_004226|STK17B|9262|serine/threonine kinase 17b
hg18_v1_chr1_+_10995265_10995330	0.250173	AAGUGCU	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg18_v1_chr1_-_25164061_25164198	0.249356	AAGUGCU	BC013362|RUNX3|864|runt-related transcription factor 3	AK310945|RUNX3|864|runt-related transcription factor 3	NM_001031680|RUNX3|864|runt-related transcription factor 3	AF022726|RUNX3|864|runt-related transcription factor 3
hg18_v1_chr7_+_101247601_101247601	0.248057	AAGUGCU	M74099|CUX1|1523|cut-like homeobox 1	NM_181552|CUX1|1523|cut-like homeobox 1
hg18_v1_chr2_-_39201066_39201107	0.247954	AAGUGCU	L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)	NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg18_v1_chr13_+_96672541_96672651	0.24623	AAGUGCU	NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)	NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)	AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)	AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)	AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)	AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg18_v1_chr17_-_41625921_41625942	0.245473	AAGUGCU	BX538006|KIAA1267|284058|KIAA1267	NM_001193466|KIAA1267|284058|KIAA1267
hg18_v1_chr6_+_126153693_126153737	0.244269	AAGUGCU	NM_001122842|NCOA7|135112|nuclear receptor coactivator 7	NM_181782|NCOA7|135112|nuclear receptor coactivator 7
hg18_v1_chr6_-_80303822_80303874	0.243576	AAGUGCU	AK299314|LCA5|167691|Leber congenital amaurosis 5	BX648161|LCA5|167691|Leber congenital amaurosis 5	BC050327|LCA5|167691|Leber congenital amaurosis 5	NM_001122769|LCA5|167691|Leber congenital amaurosis 5	NM_181714|LCA5|167691|Leber congenital amaurosis 5
hg18_v1_chr11_+_33235743_33235980	0.242168	AAGUGCU	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr15_+_63948823_63948980	0.241685	AAGUGCU	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family	AK298961|RAB11A|8766|RAB11A, member RAS oncogene family	NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family	CR606451|RAB11A|8766|RAB11A, member RAS oncogene family	AK311770|RAB11A|8766|RAB11A, member RAS oncogene family	BC013348|RAB11A|8766|RAB11A, member RAS oncogene family	AF000231|RAB11A|8766|RAB11A, member RAS oncogene family	X56740|RAB11A|8766|RAB11A, member RAS oncogene family	AK300008|RAB11A|8766|RAB11A, member RAS oncogene family	AF498946|RAB11A|8766|RAB11A, member RAS oncogene family	BT020151|RAB11A|8766|RAB11A, member RAS oncogene family	BT020154|RAB11A|8766|RAB11A, member RAS oncogene family	CR407669|RAB11A|8766|RAB11A, member RAS oncogene family	CR536493|RAB11A|8766|RAB11A, member RAS oncogene family	DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family	DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family	X53143|RAB11A|8766|RAB11A, member RAS oncogene family
hg18_v1_chr17_-_24645289_24645293	0.241585	AAGUGCU	AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2
hg18_v1_chr20_-_35589496_35589547	0.24073	AAGUGCU	NM_001167822|BLCAP|10904|bladder cancer associated protein	BC071704|BLCAP|10904|bladder cancer associated protein	NM_001167821|BLCAP|10904|bladder cancer associated protein
hg18_v1_chr14_-_34252695_34252784	0.240676	AAGUGCU	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr10_+_126620681_126620681	0.239753	AAGUGCU	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr2_+_95194903_95194937	0.236391	AAGUGCU	X60152|ZNF2|7549|zinc finger protein 2	AK055072|ZNF2|7549|zinc finger protein 2	NM_001017396|ZNF2|7549|zinc finger protein 2	NM_021088|ZNF2|7549|zinc finger protein 2	BC005068|ZNF2|7549|zinc finger protein 2	CR749650|ZNF2|7549|zinc finger protein 2
hg18_v1_chr17_+_34115383_34115450	0.235726	AAGUGCU	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr1_-_74912009_74912009	0.230173	AAGUGCU	AK127470|C1orf173|127254|chromosome 1 open reading frame 173	NM_001002912|C1orf173|127254|chromosome 1 open reading frame 173
hg18_v1_chr11_+_66643311_66643319	0.228663	AAGUGCU	BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A	NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A
hg18_v1_chr7_-_102576570_102577037	0.227942	AAGUGCU	AY357337|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D	CR936639|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D	NM_001122838|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D	NM_198990|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D	CR615836|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D
hg18_v1_chr3_-_157054860_157054941	0.224892	AAGUGCU	D88152|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1	BC014416|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1	CR622424|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1	AK312268|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1	NM_001190992|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1	NM_004733|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1
hg18_v1_chr3_-_8980070_8980190	0.221923	AAGUGCU	DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)	DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)	AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)	CR626625|RAD18|56852|RAD18 homolog (S. cerevisiae)	CR598315|RAD18|56852|RAD18 homolog (S. cerevisiae)	BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)	AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)	AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)	AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)	NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)
hg18_v1_chr2_+_172087102_172087277	0.221322	AAGUGCU	NM_001127383|CYBRD1|79901|cytochrome b reductase 1	NM_024843|CYBRD1|79901|cytochrome b reductase 1	AK128495|CYBRD1|79901|cytochrome b reductase 1	AK316588|CYBRD1|79901|cytochrome b reductase 1	AL136693|CYBRD1|79901|cytochrome b reductase 1	BC016900|CYBRD1|79901|cytochrome b reductase 1	AK291731|CYBRD1|79901|cytochrome b reductase 1	AK027115|CYBRD1|79901|cytochrome b reductase 1	AK225459|CYBRD1|79901|cytochrome b reductase 1	BC065290|CYBRD1|79901|cytochrome b reductase 1
hg18_v1_chr17_+_78070853_78070906	0.220783	AAGUGCU	NM_004514|FOXK2|3607|forkhead box K2
hg18_v1_chr19_-_49696322_49696443	0.220748	AAGUGCU	BC113015|ZNF180|7733|zinc finger protein 180	BC051903|ZNF180|7733|zinc finger protein 180	BC033642|ZNF180|7733|zinc finger protein 180	AF192913|ZNF180|7733|zinc finger protein 180	AK024047|ZNF180|7733|zinc finger protein 180	AK122688|ZNF180|7733|zinc finger protein 180	AK315193|ZNF180|7733|zinc finger protein 180	NM_013256|ZNF180|7733|zinc finger protein 180
hg18_v1_chr2_-_218516950_218517102	0.220366	AAGUGCU	BC140942|TNS1|7145|tensin 1	AK300345|TNS1|7145|tensin 1	NM_022648|TNS1|7145|tensin 1
hg18_v1_chr7_-_13992351_13992663	0.220048	AAGUGCU	AK293802|ETV1|2115|ets variant 1	AK311134|ETV1|2115|ets variant 1	AK311194|ETV1|2115|ets variant 1	CR627389|ETV1|2115|ets variant 1	AK294572|ETV1|2115|ets variant 1	AK311707|ETV1|2115|ets variant 1	AK316007|ETV1|2115|ets variant 1	AK299693|ETV1|2115|ets variant 1	NM_001163150|ETV1|2115|ets variant 1	NM_001163151|ETV1|2115|ets variant 1	NM_001163152|ETV1|2115|ets variant 1
hg18_v1_chr5_+_119827903_119827917	0.219926	AAGUGCU	AF242769|PRR16|51334|proline rich 16	NM_016644|PRR16|51334|proline rich 16
hg18_v1_chr3_+_171167243_171167321	0.216022	AAGUGCU	NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)	CR618317|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)	BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)	D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)	U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)	EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)	EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)
hg18_v1_chr6_+_34867721_34867776	0.215616	AAGUGCU	NM_017754|UHRF1BP1|54887|UHRF1 binding protein 1	BC026164|UHRF1BP1|54887|UHRF1 binding protein 1
hg18_v1_chr17_+_63462276_63462328	0.212176	AAGUGCU	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR599710|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR607334|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR605528|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chr12_+_54646814_54646899	0.212001	AAGUGCU	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	CR603533|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg18_v1_chr17_-_53950191_53950293	0.210484	AAGUGCU	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr19_+_16169664_16169837	0.209289	AAGUGCU	AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit	NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit	NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit	AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit	BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit	AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit	AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit	DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit
hg18_v1_chr9_-_8723893_8723945	0.20917	AAGUGCU	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg18_v1_chr17_+_71232370_71232378	0.208739	AAGUGCU	NM_001005619|ITGB4|3691|integrin, beta 4	X52186|ITGB4|3691|integrin, beta 4	AF011375|ITGB4|3691|integrin, beta 4
hg18_v1_chr11_+_128751044_128751138	0.207275	AAGUGCU	AF031924|BARX2|8538|BARX homeobox 2	BC069378|BARX2|8538|BARX homeobox 2	NM_003658|BARX2|8538|BARX homeobox 2	BC111432|BARX2|8538|BARX homeobox 2	BC111572|BARX2|8538|BARX homeobox 2	AJ243512|BARX2|8538|BARX homeobox 2
hg18_v1_chr10_-_27569269_27569831	0.206986	AAGUGCU	AK295031|ACBD5|91452|acyl-CoA binding domain containing 5	AK304842|ACBD5|91452|acyl-CoA binding domain containing 5	BC025309|ACBD5|91452|acyl-CoA binding domain containing 5	BC030555|ACBD5|91452|acyl-CoA binding domain containing 5	BC011364|ACBD5|91452|acyl-CoA binding domain containing 5	AK294510|ACBD5|91452|acyl-CoA binding domain containing 5	NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5
hg18_v1_chr4_-_109308893_109309603	0.204813	AAGUGCU	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1	AK225772|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1	NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1
hg18_v1_chr8_-_91727074_91727308	0.203557	AAGUGCU	AY147881|TMEM64|169200|transmembrane protein 64	NM_001008495|TMEM64|169200|transmembrane protein 64	NM_001146273|TMEM64|169200|transmembrane protein 64
hg18_v1_chr15_-_91433165_91433550	0.203082	AAGUGCU	AM392685|RGMA|56963|RGM domain family, member A	BC146682|RGMA|56963|RGM domain family, member A	AK074980|RGMA|56963|RGM domain family, member A	BC140838|RGMA|56963|RGM domain family, member A	BC151132|RGMA|56963|RGM domain family, member A	AL136826|RGMA|56963|RGM domain family, member A	AK074910|RGMA|56963|RGM domain family, member A	NM_020211|RGMA|56963|RGM domain family, member A
hg18_v1_chr5_+_112071087_112071133	0.201884	AAGUGCU	NM_001127511|APC|324|adenomatous polyposis coli	AK294544|APC|324|adenomatous polyposis coli
hg18_v1_chr14_+_52089615_52089755	0.200518	AAGUGCU	NM_001099652|GPR137C|283554|G protein-coupled receptor 137C	AY255590|GPR137C|283554|G protein-coupled receptor 137C	AK123953|GPR137C|283554|G protein-coupled receptor 137C	AL834372|GPR137C|283554|G protein-coupled receptor 137C
hg18_v1_chr1_-_46370837_46371294	0.200073	AAGUGCU	CR749649|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	BC021622|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	NM_003629|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	EU832448|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	EU832531|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	BX537388|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	BC094768|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	AK313726|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	NM_001114172|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg18_v1_chr11_-_73149705_73149886	0.19969	AAGUGCU	BC034996|RAB6A|5870|RAB6A, member RAS oncogene family	BC003617|RAB6A|5870|RAB6A, member RAS oncogene family	AK309311|RAB6A|5870|RAB6A, member RAS oncogene family	AK223551|RAB6A|5870|RAB6A, member RAS oncogene family	AK289748|RAB6A|5870|RAB6A, member RAS oncogene family	BC096818|RAB6A|5870|RAB6A, member RAS oncogene family	AK057157|RAB6A|5870|RAB6A, member RAS oncogene family	BC068486|RAB6A|5870|RAB6A, member RAS oncogene family	NM_002869|RAB6A|5870|RAB6A, member RAS oncogene family	NM_198896|RAB6A|5870|RAB6A, member RAS oncogene family
hg18_v1_chr5_+_149090007_149090033	0.198282	AAGUGCU	BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg18_v1_chr14_-_22516271_22516271	0.198111	AAGUGCU	AK096128|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_198086|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr2_-_227737518_227737518	0.195801	AAGUGCU	NM_000092|COL4A4|1286|collagen, type IV, alpha 4
hg18_v1_chr14_+_35365266_35365443	0.195801	AAGUGCU	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	CR595618|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	CR612796|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like
hg18_v1_chr1_+_170768914_170769094	0.195008	AAGUGCU	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr16_-_1404635_1404723	0.194366	AAGUGCU	AM944365|UNKL|64718|unkempt homolog (Drosophila)-like	BC011924|UNKL|64718|unkempt homolog (Drosophila)-like	AK124977|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like
hg18_v1_chr17_+_54763689_54763911	0.194319	AAGUGCU	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)	BC132884|YPEL2|388403|yippee-like 2 (Drosophila)	BC132886|YPEL2|388403|yippee-like 2 (Drosophila)	AK097253|YPEL2|388403|yippee-like 2 (Drosophila)	AB098736|YPEL2|388403|yippee-like 2 (Drosophila)
hg18_v1_chr6_+_152168500_152168532	0.193593	AAGUGCU	NM_001122741|ESR1|2099|estrogen receptor 1	AK293019|ESR1|2099|estrogen receptor 1	AK313644|ESR1|2099|estrogen receptor 1
hg18_v1_chr12_+_8076508_8077006	0.190081	AAGUGCU	NM_018416|FOXJ2|55810|forkhead box J2
hg18_v1_chr1_+_3558958_3559015	0.189395	AAGUGCU	BC117251|TP73|7161|tumor protein p73	BC117253|TP73|7161|tumor protein p73	NM_005427|TP73|7161|tumor protein p73	Y11416|TP73|7161|tumor protein p73	CR599961|TP73|7161|tumor protein p73
hg18_v1_chr15_+_38520594_38520716	0.189184	AAGUGCU	BC022782|BAHD1|22893|bromo adjacent homology domain containing 1	NM_014952|BAHD1|22893|bromo adjacent homology domain containing 1
hg18_v1_chr11_-_77209398_77209562	0.188925	AAGUGCU	AF380176|RSF1|51773|remodeling and spacing factor 1	BC015360|RSF1|51773|remodeling and spacing factor 1	NM_016578|RSF1|51773|remodeling and spacing factor 1
hg18_v1_chr5_-_89861048_89861197	0.188877	AAGUGCU	BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3
hg18_v1_chr22_+_28609064_28609194	0.188597	AAGUGCU	BC151217|MTMR3|8897|myotubularin related protein 3	AK289581|MTMR3|8897|myotubularin related protein 3	NM_021090|MTMR3|8897|myotubularin related protein 3	NM_153050|MTMR3|8897|myotubularin related protein 3	NM_153051|MTMR3|8897|myotubularin related protein 3
hg18_v1_chr20_-_30259007_30259266	0.188035	AAGUGCU	AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2	D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2	AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2	BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2	NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2
hg18_v1_chr9_-_135014343_135014672	0.184784	AAGUGCU	AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator	NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator
hg18_v1_chr5_+_179092405_179092511	0.184481	AAGUGCU	D83785|MAML1|9794|mastermind-like 1 (Drosophila)	NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)	AB209135|MAML1|9794|mastermind-like 1 (Drosophila)	BC047937|MAML1|9794|mastermind-like 1 (Drosophila)
hg18_v1_chr16_+_51646292_51646473	0.182995	AAGUGCU	AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9	BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9	NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9
hg18_v1_chr7_+_20337249_20337270	0.182138	AAGUGCU	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr22_+_44925162_44925226	0.181705	AAGUGCU	NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha	NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha	AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha	AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha
hg18_v1_chr11_+_9552809_9552809	0.180796	AAGUGCU	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg18_v1_chr22_-_49260136_49260372	0.179417	AAGUGCU	EU831421|SBF1|6305|SET binding factor 1	EU831514|SBF1|6305|SET binding factor 1	BC087612|SBF1|6305|SET binding factor 1	BC040031|SBF1|6305|SET binding factor 1	AK057985|SBF1|6305|SET binding factor 1	NM_002972|SBF1|6305|SET binding factor 1
hg18_v1_chr10_+_112621585_112621663	0.178688	AAGUGCU	NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)	NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)	AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)
hg18_v1_chr5_-_134810696_134810936	0.177181	AAGUGCU	BC074831|C5orf20|140947|chromosome 5 open reading frame 20	BC074832|C5orf20|140947|chromosome 5 open reading frame 20	BC069608|C5orf20|140947|chromosome 5 open reading frame 20	BC069610|C5orf20|140947|chromosome 5 open reading frame 20	BC117156|C5orf20|140947|chromosome 5 open reading frame 20	BC117158|C5orf20|140947|chromosome 5 open reading frame 20	AB074498|C5orf20|140947|chromosome 5 open reading frame 20	NM_130848|C5orf20|140947|chromosome 5 open reading frame 20
hg18_v1_chr4_+_48038259_48038481	0.176914	AAGUGCU	BC006139|SLAIN2|57606|SLAIN motif family, member 2	BC007701|SLAIN2|57606|SLAIN motif family, member 2	BC012067|SLAIN2|57606|SLAIN motif family, member 2	NM_020846|SLAIN2|57606|SLAIN motif family, member 2	AB040891|SLAIN2|57606|SLAIN motif family, member 2	CR621779|SLAIN2|57606|SLAIN motif family, member 2
hg18_v1_chr16_-_70306198_70306204	0.175648	AAGUGCU	AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2
hg18_v1_chr6_+_157722467_157722587	0.174839	AAGUGCU	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14	AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14	NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14	NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14	BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14	BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14
hg18_v1_chr12_+_19483578_19483995	0.174015	AAGUGCU	AK131361|AEBP2|121536|AE binding protein 2	NM_001114176|AEBP2|121536|AE binding protein 2	NM_153207|AEBP2|121536|AE binding protein 2	AK126973|AEBP2|121536|AE binding protein 2	BC022220|AEBP2|121536|AE binding protein 2
hg18_v1_chr12_+_102982365_102982468	0.173626	AAGUGCU	NM_013320|HCFC2|29915|host cell factor C2	AK313466|HCFC2|29915|host cell factor C2	AK223342|HCFC2|29915|host cell factor C2	BC006558|HCFC2|29915|host cell factor C2	AF117210|HCFC2|29915|host cell factor C2	BC033799|HCFC2|29915|host cell factor C2	EU446491|HCFC2|29915|host cell factor C2
hg18_v1_chr15_-_81113676_81113782	0.172633	AAGUGCU	BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1
hg18_v1_chr14_-_22521544_22521687	0.172142	AAGUGCU	BC034968|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_032876|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr2_-_2313894_2314051	0.172085	AAGUGCU	BC137272|MYT1L|23040|myelin transcription factor 1-like	BC137273|MYT1L|23040|myelin transcription factor 1-like	AF036943|MYT1L|23040|myelin transcription factor 1-like	AB029029|MYT1L|23040|myelin transcription factor 1-like	BC150281|MYT1L|23040|myelin transcription factor 1-like	NM_015025|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr20_-_35157815_35157827	0.171709	AAGUGCU	AK310870|RBL1|5933|retinoblastoma-like 1 (p107)	NM_002895|RBL1|5933|retinoblastoma-like 1 (p107)	NM_183404|RBL1|5933|retinoblastoma-like 1 (p107)
hg18_v1_chr17_+_24742068_24742074	0.171601	AAGUGCU	NM_020791|TAOK1|57551|TAO kinase 1	BC133039|TAOK1|57551|TAO kinase 1	BC144067|TAOK1|57551|TAO kinase 1
hg18_v1_chr17_-_63798851_63798999	0.171473	AAGUGCU	U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)
hg18_v1_chr18_-_43711452_43711522	0.1709	AAGUGCU	NM_001003652|SMAD2|4087|SMAD family member 2	NM_001135937|SMAD2|4087|SMAD family member 2
hg18_v1_chr17_-_41658493_41658516	0.170467	AAGUGCU	AK291259|KIAA1267|284058|KIAA1267	NM_001193465|KIAA1267|284058|KIAA1267
hg18_v1_chr10_+_60606352_60606437	0.170222	AAGUGCU	AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR593164|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chr20_-_17897067_17897362	0.169295	AAGUGCU	BT007191|SNX5|27131|sorting nexin 5	AK223308|SNX5|27131|sorting nexin 5	CR610846|SNX5|27131|sorting nexin 5	CR601419|SNX5|27131|sorting nexin 5	AK001793|SNX5|27131|sorting nexin 5	AK129505|SNX5|27131|sorting nexin 5	NM_014426|SNX5|27131|sorting nexin 5	BC093623|SNX5|27131|sorting nexin 5	BC093980|SNX5|27131|sorting nexin 5	BC143274|SNX5|27131|sorting nexin 5
hg18_v1_chr1_+_28637247_28637268	0.168523	AAGUGCU	NM_023923|PHACTR4|65979|phosphatase and actin regulator 4	BC021247|PHACTR4|65979|phosphatase and actin regulator 4
hg18_v1_chr5_+_31229549_31229589	0.168422	AAGUGCU	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chrX_-_131451675_131451753	0.168054	AAGUGCU	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr17_+_35629080_35629200	0.167422	AAGUGCU	AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2	AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2	NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2	AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2	BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2	AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2
hg18_v1_chr8_+_8897723_8897828	0.167106	AAGUGCU	NM_153332|ERI1|90459|exoribonuclease 1	AL137679|ERI1|90459|exoribonuclease 1
hg18_v1_chr2_-_206659140_206659172	0.16618	AAGUGCU	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg18_v1_chr7_-_22363036_22363057	0.165924	AAGUGCU	AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5	NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5
hg18_v1_chr3_-_46012303_46012347	0.163724	AAGUGCU	AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1	AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1	NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1
hg18_v1_chr8_+_107739071_107739257	0.163104	AAGUGCU	AK123667|OXR1|55074|oxidation resistance 1	NM_181354|OXR1|55074|oxidation resistance 1	BC035484|OXR1|55074|oxidation resistance 1
hg18_v1_chr3_+_47299333_47299532	0.162336	AAGUGCU	NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)	AK023765|KLHL18|23276|kelch-like 18 (Drosophila)	AK291477|KLHL18|23276|kelch-like 18 (Drosophila)	AK295292|KLHL18|23276|kelch-like 18 (Drosophila)	BX537953|KLHL18|23276|kelch-like 18 (Drosophila)	BC015962|KLHL18|23276|kelch-like 18 (Drosophila)	AM393269|KLHL18|23276|kelch-like 18 (Drosophila)	AM393767|KLHL18|23276|kelch-like 18 (Drosophila)	BC032620|KLHL18|23276|kelch-like 18 (Drosophila)
hg18_v1_chr21_-_35343456_35343490	0.162164	AAGUGCU	NM_001754|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr2_-_97646970_97647043	0.161917	AAGUGCU	NM_005735|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
hg18_v1_chr4_+_71986927_71987035	0.161888	AAGUGCU	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chr12_+_54423330_54423449	0.161188	AAGUGCU	NM_005811|GDF11|10220|growth differentiation factor 11	AF100907|GDF11|10220|growth differentiation factor 11	CR611917|GDF11|10220|growth differentiation factor 11	AF028333|GDF11|10220|growth differentiation factor 11
hg18_v1_chr4_-_47534815_47534879	0.16087	AAGUGCU	AF133845|CORIN|10699|corin, serine peptidase	BC110451|CORIN|10699|corin, serine peptidase	NM_006587|CORIN|10699|corin, serine peptidase	AK297675|CORIN|10699|corin, serine peptidase	AK304038|CORIN|10699|corin, serine peptidase	AK304466|CORIN|10699|corin, serine peptidase	BX648285|CORIN|10699|corin, serine peptidase
hg18_v1_chr14_+_64001969_64002058	0.160704	AAGUGCU	AK315336|AKAP5|9495|A kinase (PRKA) anchor protein 5	NM_004857|AKAP5|9495|A kinase (PRKA) anchor protein 5	BC057229|AKAP5|9495|A kinase (PRKA) anchor protein 5
hg18_v1_chr11_-_65138217_65138322	0.159942	AAGUGCU	U07747|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	BC064543|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	AK315557|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	AB209655|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	BC011263|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	L32976|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	AK222781|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	NM_002419|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11
hg18_v1_chr2_-_69724480_69724712	0.159902	AAGUGCU	NM_014911|AAK1|22848|AP2 associated kinase 1	BC090950|AAK1|22848|AP2 associated kinase 1
hg18_v1_chr1_-_116184846_116184884	0.159867	AAGUGCU	NM_001111061|NHLH2|4808|nescient helix loop helix 2	AK312849|NHLH2|4808|nescient helix loop helix 2
hg18_v1_chr18_-_43710917_43710923	0.159447	AAGUGCU	CR592338|SMAD2|4087|SMAD family member 2	BC014840|SMAD2|4087|SMAD family member 2	NM_005901|SMAD2|4087|SMAD family member 2
hg18_v1_chr2_-_60633908_60634145	0.158232	AAGUGCU	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg18_v1_chr16_+_23476334_23476498	0.157682	AAGUGCU	NM_019116|UBFD1|56061|ubiquitin family domain containing 1
hg18_v1_chr13_-_77447664_77447770	0.157513	AAGUGCU	D90402|EDNRB|1910|endothelin receptor type B	NM_000115|EDNRB|1910|endothelin receptor type B	S57283|EDNRB|1910|endothelin receptor type B
hg18_v1_chr12_-_91063441_91063803	0.156205	AAGUGCU	BT019839|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019840|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019841|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR456876|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR541782|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176394|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176740|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR590022|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR620161|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR595512|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR601264|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609466|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616928|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR617798|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604248|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604369|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR606339|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609805|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR614716|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR615938|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616550|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg18_v1_chr2_+_70338708_70338801	0.155644	AAGUGCU	NM_016297|PCYOX1|51449|prenylcysteine oxidase 1	AF181490|PCYOX1|51449|prenylcysteine oxidase 1	BC051891|PCYOX1|51449|prenylcysteine oxidase 1	AY359063|PCYOX1|51449|prenylcysteine oxidase 1	BC033815|PCYOX1|51449|prenylcysteine oxidase 1	AK314453|PCYOX1|51449|prenylcysteine oxidase 1	AK225302|PCYOX1|51449|prenylcysteine oxidase 1	AK303043|PCYOX1|51449|prenylcysteine oxidase 1	BC022259|PCYOX1|51449|prenylcysteine oxidase 1	CR623756|PCYOX1|51449|prenylcysteine oxidase 1	CR596400|PCYOX1|51449|prenylcysteine oxidase 1	AB020715|PCYOX1|51449|prenylcysteine oxidase 1	DQ890801|PCYOX1|51449|prenylcysteine oxidase 1	DQ893956|PCYOX1|51449|prenylcysteine oxidase 1
hg18_v1_chr12_+_111047676_111047734	0.155044	AAGUGCU	AK309916|TRAFD1|10906|TRAF-type zinc finger domain containing 1	AK312601|TRAFD1|10906|TRAF-type zinc finger domain containing 1	NM_001143906|TRAFD1|10906|TRAF-type zinc finger domain containing 1	NM_006700|TRAFD1|10906|TRAF-type zinc finger domain containing 1
hg18_v1_chr11_+_75203859_75203882	0.153377	AAGUGCU	NM_003369|UVRAG|7405|UV radiation resistance associated gene	AK291011|UVRAG|7405|UV radiation resistance associated gene
hg18_v1_chr12_+_66328760_66329020	0.153218	AAGUGCU	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg18_v1_chr8_+_1436938_1436975	0.152778	AAGUGCU	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg18_v1_chr20_+_13150417_13150430	0.152393	AAGUGCU	NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)
hg18_v1_chr1_+_109838180_109838259	0.151392	AAGUGCU	NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1	AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1	NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1	NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1	NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1	NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1	AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1	BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1	AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1	AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1	BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1	BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1	BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1	AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1	AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1
hg18_v1_chr20_+_60151868_60152444	0.15072	AAGUGCU	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1
hg18_v1_chr1_-_42573210_42573468	0.149724	AAGUGCU	AB028964|FOXJ3|22887|forkhead box J3	BC152441|FOXJ3|22887|forkhead box J3	NM_001198851|FOXJ3|22887|forkhead box J3	BC151828|FOXJ3|22887|forkhead box J3
hg18_v1_chr1_-_44269719_44269733	0.149512	AAGUGCU	AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg18_v1_chr12_-_54869568_54869661	0.149303	AAGUGCU	AB209006|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001130420|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_003075|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_139067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg18_v1_chr20_-_17897384_17897497	0.148625	AAGUGCU	BC002724|SNX5|27131|sorting nexin 5	BC062638|SNX5|27131|sorting nexin 5	AK123903|SNX5|27131|sorting nexin 5	AK308017|SNX5|27131|sorting nexin 5	AK296947|SNX5|27131|sorting nexin 5	CR600241|SNX5|27131|sorting nexin 5	BC000100|SNX5|27131|sorting nexin 5	CR591673|SNX5|27131|sorting nexin 5	AF121855|SNX5|27131|sorting nexin 5	NM_152227|SNX5|27131|sorting nexin 5
hg18_v1_chr8_+_28407613_28407756	0.146374	AAGUGCU	AK291480|FZD3|7976|frizzled homolog 3 (Drosophila)	AB039723|FZD3|7976|frizzled homolog 3 (Drosophila)	NM_017412|FZD3|7976|frizzled homolog 3 (Drosophila)
hg18_v1_chr14_+_76634323_76634473	0.146118	AAGUGCU	NM_033426|KIAA1737|85457|KIAA1737	AK315124|KIAA1737|85457|KIAA1737	BC037300|KIAA1737|85457|KIAA1737	AK096603|KIAA1737|85457|KIAA1737	AL834514|KIAA1737|85457|KIAA1737
hg18_v1_chr20_+_56659693_56659895	0.145626	AAGUGCU	AK316547|STX16|8675|syntaxin 16	NM_001001433|STX16|8675|syntaxin 16	NM_001134772|STX16|8675|syntaxin 16	NM_001134773|STX16|8675|syntaxin 16	NM_003763|STX16|8675|syntaxin 16	AK304867|STX16|8675|syntaxin 16
hg18_v1_chr4_-_163304567_163304635	0.145444	AAGUGCU	AB033089|FSTL5|56884|follistatin-like 5	AK315152|FSTL5|56884|follistatin-like 5	BC036502|FSTL5|56884|follistatin-like 5	NM_001128427|FSTL5|56884|follistatin-like 5	NM_001128428|FSTL5|56884|follistatin-like 5	NM_020116|FSTL5|56884|follistatin-like 5
hg18_v1_chr16_-_2125825_2125975	0.145285	AAGUGCU	U24497|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)	L33243|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)	NM_000296|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)	NM_001009944|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)
hg18_v1_chr20_-_25010756_25010766	0.14456	AAGUGCU	BC126228|VSX1|30813|visual system homeobox 1	BC136497|VSX1|30813|visual system homeobox 1	AF251033|VSX1|30813|visual system homeobox 1	AF251034|VSX1|30813|visual system homeobox 1	DQ854807|VSX1|30813|visual system homeobox 1	DQ854808|VSX1|30813|visual system homeobox 1	DQ854809|VSX1|30813|visual system homeobox 1	DQ854810|VSX1|30813|visual system homeobox 1	DQ854811|VSX1|30813|visual system homeobox 1	DQ854812|VSX1|30813|visual system homeobox 1	NM_014588|VSX1|30813|visual system homeobox 1	NM_199425|VSX1|30813|visual system homeobox 1
hg18_v1_chr11_+_120399966_120400075	0.144457	AAGUGCU	AK313324|TBCEL|219899|tubulin folding cofactor E-like	NM_001130047|TBCEL|219899|tubulin folding cofactor E-like	NM_152715|TBCEL|219899|tubulin folding cofactor E-like	AK295673|TBCEL|219899|tubulin folding cofactor E-like	BC020501|TBCEL|219899|tubulin folding cofactor E-like	AK024239|TBCEL|219899|tubulin folding cofactor E-like	AY398644|TBCEL|219899|tubulin folding cofactor E-like	CR616944|TBCEL|219899|tubulin folding cofactor E-like
hg18_v1_chr15_-_91432755_91432755	0.144273	AAGUGCU	NM_001166287|RGMA|56963|RGM domain family, member A
hg18_v1_chr18_+_41560915_41560915	0.143398	AAGUGCU	NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chr11_-_36488343_36488419	0.143225	AAGUGCU	CR590964|TRAF6|7189|TNF receptor-associated factor 6	U78798|TRAF6|7189|TNF receptor-associated factor 6	CR612801|TRAF6|7189|TNF receptor-associated factor 6	BC031052|TRAF6|7189|TNF receptor-associated factor 6	AK292978|TRAF6|7189|TNF receptor-associated factor 6	NM_004620|TRAF6|7189|TNF receptor-associated factor 6	NM_145803|TRAF6|7189|TNF receptor-associated factor 6
hg18_v1_chr12_-_75983329_75983512	0.142752	AAGUGCU	BC136366|E2F7|144455|E2F transcription factor 7	BC136367|E2F7|144455|E2F transcription factor 7	CR606651|E2F7|144455|E2F transcription factor 7	BC017481|E2F7|144455|E2F transcription factor 7	NM_203394|E2F7|144455|E2F transcription factor 7
hg18_v1_chr15_-_59308770_59308809	0.142562	AAGUGCU	NM_134261|RORA|6095|RAR-related orphan receptor A	U04897|RORA|6095|RAR-related orphan receptor A
hg18_v1_chr14_-_74663473_74663538	0.142423	AAGUGCU	AB082526|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9	AK128693|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9	NM_033116|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9
hg18_v1_chr5_-_40791766_40791828	0.14195	AAGUGCU	AF023244|TTC33|23548|tetratricopeptide repeat domain 33	BC036536|TTC33|23548|tetratricopeptide repeat domain 33	BC015701|TTC33|23548|tetratricopeptide repeat domain 33	AK312560|TTC33|23548|tetratricopeptide repeat domain 33	AK307131|TTC33|23548|tetratricopeptide repeat domain 33	AK303119|TTC33|23548|tetratricopeptide repeat domain 33	NM_012382|TTC33|23548|tetratricopeptide repeat domain 33
hg18_v1_chr6_-_90178685_90179001	0.141548	AAGUGCU	CR614317|RRAGD|58528|Ras-related GTP binding D	CR597649|RRAGD|58528|Ras-related GTP binding D	NM_021244|RRAGD|58528|Ras-related GTP binding D
hg18_v1_chr6_-_143813481_143813563	0.141137	AAGUGCU	BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)	CR616838|ADAT2|134637|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)	NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae)
hg18_v1_chr6_-_32203971_32204007	0.140701	AAGUGCU	BC008394|ATF6B|1388|activating transcription factor 6 beta	NM_001136153|ATF6B|1388|activating transcription factor 6 beta	NM_004381|ATF6B|1388|activating transcription factor 6 beta	X98054|ATF6B|1388|activating transcription factor 6 beta	U31903|ATF6B|1388|activating transcription factor 6 beta
hg18_v1_chr20_+_45564007_45564052	0.14015	AAGUGCU	NM_001174087|NCOA3|8202|nuclear receptor coactivator 3	NM_001174088|NCOA3|8202|nuclear receptor coactivator 3	NM_006534|NCOA3|8202|nuclear receptor coactivator 3	NM_181659|NCOA3|8202|nuclear receptor coactivator 3	BC092516|NCOA3|8202|nuclear receptor coactivator 3
hg18_v1_chr19_+_4861339_4861565	0.140113	AAGUGCU	AB177624|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1	EF560733|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1	NM_013282|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1
hg18_v1_chr15_+_94677572_94677572	0.139134	AAGUGCU	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr5_-_133996362_133996431	0.138092	AAGUGCU	BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	CR601141|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	CR618910|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	CR618571|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)
hg18_v1_chr7_+_6111030_6111108	0.1375	AAGUGCU	NM_032172|USP42|84132|ubiquitin specific peptidase 42	AK298164|USP42|84132|ubiquitin specific peptidase 42
hg18_v1_chr10_+_102881050_102881287	0.136499	AAGUGCU	BC130530|TLX1|3195|T-cell leukemia homeobox 1	NM_001195517|TLX1|3195|T-cell leukemia homeobox 1	NM_005521|TLX1|3195|T-cell leukemia homeobox 1	S38742|TLX1|3195|T-cell leukemia homeobox 1	M75952|TLX1|3195|T-cell leukemia homeobox 1
hg18_v1_chr8_-_96030719_96030948	0.136244	AAGUGCU	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg18_v1_chr4_+_57469821_57469873	0.136157	AAGUGCU	NM_001193508|REST|5978|RE1-silencing transcription factor
hg18_v1_chr20_-_5539487_5539688	0.135556	AAGUGCU	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg18_v1_chr14_-_52689782_52689819	0.135179	AAGUGCU	NM_001160147|DDHD1|80821|DDHD domain containing 1	NM_001160148|DDHD1|80821|DDHD domain containing 1	NM_030637|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr2_-_225158349_225158379	0.134687	AAGUGCU	NM_003590|CUL3|8452|cullin 3
hg18_v1_chr15_+_97923655_97923697	0.134067	AAGUGCU	NM_001130926|MEF2A|4205|myocyte enhancer factor 2A	NM_001130927|MEF2A|4205|myocyte enhancer factor 2A	NM_001171894|MEF2A|4205|myocyte enhancer factor 2A	NM_005587|MEF2A|4205|myocyte enhancer factor 2A	AB208985|MEF2A|4205|myocyte enhancer factor 2A
hg18_v1_chr6_+_42896771_42896848	0.133895	AAGUGCU	AL833540|KIAA0240|23506|KIAA0240	NM_015349|KIAA0240|23506|KIAA0240	BC130302|KIAA0240|23506|KIAA0240
hg18_v1_chr2_-_24123726_24123799	0.133175	AAGUGCU	AK025598|C2orf44|80304|chromosome 2 open reading frame 44	BC035698|C2orf44|80304|chromosome 2 open reading frame 44	NM_001142319|C2orf44|80304|chromosome 2 open reading frame 44	NM_025203|C2orf44|80304|chromosome 2 open reading frame 44
hg18_v1_chr6_-_90405156_90405212	0.132648	AAGUGCU	EU831412|LYRM2|57226|LYR motif containing 2	EU831505|LYRM2|57226|LYR motif containing 2	AL122090|LYRM2|57226|LYR motif containing 2	BC104668|LYRM2|57226|LYR motif containing 2	BC009782|LYRM2|57226|LYR motif containing 2	AK024783|LYRM2|57226|LYR motif containing 2	NM_020466|LYRM2|57226|LYR motif containing 2
hg18_v1_chr12_-_122400937_122400940	0.132287	AAGUGCU	AY364255|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	AB014772|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	BC129949|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	BC133704|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	NM_001167856|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	NM_018183|SBNO1|55206|strawberry notch homolog 1 (Drosophila)
hg18_v1_chr7_+_7188667_7188878	0.132155	AAGUGCU	NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg18_v1_chr1_+_165564904_165564941	0.131364	AAGUGCU	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr9_-_129782624_129782637	0.131289	AAGUGCU	AK058004|FAM102A|399665|family with sequence similarity 102, member A	NM_001035254|FAM102A|399665|family with sequence similarity 102, member A
hg18_v1_chr5_-_114908435_114908489	0.130777	AAGUGCU	BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)	NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)
hg18_v1_chr19_+_59386915_59387027	0.128757	AAGUGCU	NM_001077446|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	BC020805|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	CR607949|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	CR598135|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	DQ893336|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	DQ896652|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)
hg18_v1_chr18_+_65219114_65219306	0.127857	AAGUGCU	NM_152721|DOK6|220164|docking protein 6	AY599248|DOK6|220164|docking protein 6	BC096744|DOK6|220164|docking protein 6
hg18_v1_chr3_-_124822113_124822219	0.125758	AAGUGCU	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg18_v1_chr17_-_40923907_40923967	0.125679	AAGUGCU	NM_014798|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg18_v1_chr6_+_110608284_110608349	0.125123	AAGUGCU	AF038392|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	NM_015891|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	BC117145|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	BC126114|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	AK314601|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	AK222721|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	AK295055|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	AB208903|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	CR620928|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	AF061241|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	AF015044|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)
hg18_v1_chr1_+_170768635_170768896	0.124706	AAGUGCU	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr20_+_51022352_51022352	0.124612	AAGUGCU	BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2	NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2
hg18_v1_chr6_+_152053323_152053425	0.124283	AAGUGCU	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chr7_+_70235724_70235724	0.123363	AAGUGCU	AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17	NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17
hg18_v1_chr5_+_179180447_179180508	0.121261	AAGUGCU	NM_003900|SQSTM1|8878|sequestosome 1	AK312451|SQSTM1|8878|sequestosome 1	U46751|SQSTM1|8878|sequestosome 1
hg18_v1_chr20_-_35589696_35589757	0.121236	AAGUGCU	CR596766|BLCAP|10904|bladder cancer associated protein	CR605169|BLCAP|10904|bladder cancer associated protein	AK074498|BLCAP|10904|bladder cancer associated protein	CR605979|BLCAP|10904|bladder cancer associated protein	NM_001167820|BLCAP|10904|bladder cancer associated protein	NM_006698|BLCAP|10904|bladder cancer associated protein
hg18_v1_chr12_-_48387459_48387499	0.120861	AAGUGCU	AB095934|FMNL3|91010|formin-like 3	BC159100|FMNL3|91010|formin-like 3	NM_175736|FMNL3|91010|formin-like 3	NM_198900|FMNL3|91010|formin-like 3
hg18_v1_chr3_-_171382213_171382232	0.120639	AAGUGCU	AK022791|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	BC022325|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	AK300151|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	BC070164|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	AK304411|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	NM_024947|PHC3|80012|polyhomeotic homolog 3 (Drosophila)
hg18_v1_chr10_+_98582648_98582788	0.120445	AAGUGCU	NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor	AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor	AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr10_+_63331018_63331018	0.120021	AAGUGCU	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr6_+_152170378_152170740	0.119305	AAGUGCU	X03635|ESR1|2099|estrogen receptor 1	AK304833|ESR1|2099|estrogen receptor 1	M69297|ESR1|2099|estrogen receptor 1	AF258449|ESR1|2099|estrogen receptor 1	AF258450|ESR1|2099|estrogen receptor 1	AF258451|ESR1|2099|estrogen receptor 1	NM_000125|ESR1|2099|estrogen receptor 1	BC128573|ESR1|2099|estrogen receptor 1	BC128574|ESR1|2099|estrogen receptor 1	AB307713|ESR1|2099|estrogen receptor 1	AY750962|ESR1|2099|estrogen receptor 1	U47678|ESR1|2099|estrogen receptor 1
hg18_v1_chr15_-_23235152_23235236	0.118511	AAGUGCU	BC002582|UBE3A|7337|ubiquitin protein ligase E3A	NM_130839|UBE3A|7337|ubiquitin protein ligase E3A	AK056239|UBE3A|7337|ubiquitin protein ligase E3A
hg18_v1_chr2_+_30523586_30523718	0.118373	AAGUGCU	BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1	AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1	AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1	AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1	AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1	NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1	BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1	NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1	AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1
hg18_v1_chr3_+_153468518_153468518	0.117003	AAGUGCU	NM_021038|MBNL1|4154|muscleblind-like (Drosophila)	NM_207292|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr8_-_42028634_42028678	0.116049	AAGUGCU	U47742|MYST3|7994|MYST histone acetyltransferase (monocytic leukemia) 3	BC142659|MYST3|7994|MYST histone acetyltransferase (monocytic leukemia) 3	BC142959|MYST3|7994|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001099412|MYST3|7994|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001099413|MYST3|7994|MYST histone acetyltransferase (monocytic leukemia) 3	NM_006766|MYST3|7994|MYST histone acetyltransferase (monocytic leukemia) 3
hg18_v1_chr10_+_97793054_97793689	0.116024	AAGUGCU	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr15_-_91418095_91418219	0.114916	AAGUGCU	AK299363|RGMA|56963|RGM domain family, member A	NM_001166283|RGMA|56963|RGM domain family, member A
hg18_v1_chr10_-_74676969_74677105	0.114182	AAGUGCU	AF327347|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9	BC136507|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9	AK074420|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9	NM_015190|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9
hg18_v1_chr2_+_169021039_169021204	0.113138	AAGUGCU	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr9_-_133141726_133141754	0.111696	AAGUGCU	BC049388|FAM78A|286336|family with sequence similarity 78, member A	NM_033387|FAM78A|286336|family with sequence similarity 78, member A	AK095423|FAM78A|286336|family with sequence similarity 78, member A
hg18_v1_chr14_+_102870913_102871038	0.111264	AAGUGCU	NM_183004|EIF5|1983|eukaryotic translation initiation factor 5	BC032866|EIF5|1983|eukaryotic translation initiation factor 5	BX537367|EIF5|1983|eukaryotic translation initiation factor 5
hg18_v1_chr13_+_27610379_27610953	0.111062	AAGUGCU	AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)	NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg18_v1_chr10_+_126480343_126480381	0.111002	AAGUGCU	NM_032182|FAM175B|23172|family with sequence similarity 175, member B	AK296677|FAM175B|23172|family with sequence similarity 175, member B	D63877|FAM175B|23172|family with sequence similarity 175, member B	BC008999|FAM175B|23172|family with sequence similarity 175, member B
hg18_v1_chr10_+_60607232_60607356	0.110425	AAGUGCU	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chr9_+_101628829_101628829	0.10975	AAGUGCU	NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3
hg18_v1_chr4_+_106287391_106287528	0.109623	AAGUGCU	NM_001127208|TET2|54790|tet oncogene family member 2	NM_017628|TET2|54790|tet oncogene family member 2	AK055149|TET2|54790|tet oncogene family member 2	BC150180|TET2|54790|tet oncogene family member 2	BC150201|TET2|54790|tet oncogene family member 2
hg18_v1_chr1_-_26197121_26197234	0.108831	AAGUGCU	BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	CR597579|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa	NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa
hg18_v1_chr11_+_94462585_94462735	0.10767	AAGUGCU	AK291673|ENDOD1|23052|endonuclease domain containing 1	NM_015036|ENDOD1|23052|endonuclease domain containing 1	BC026191|ENDOD1|23052|endonuclease domain containing 1	AB020637|ENDOD1|23052|endonuclease domain containing 1	BC071171|ENDOD1|23052|endonuclease domain containing 1	CR609394|ENDOD1|23052|endonuclease domain containing 1
hg18_v1_chr14_-_59407103_59407309	0.107608	AAGUGCU	BC111694|RTN1|6252|reticulon 1	L10333|RTN1|6252|reticulon 1	BC090862|RTN1|6252|reticulon 1	BC068510|RTN1|6252|reticulon 1	NM_021136|RTN1|6252|reticulon 1
hg18_v1_chr17_-_51155073_51155223	0.105619	AAGUGCU	BC010128|TMEM100|55273|transmembrane protein 100	CR596094|TMEM100|55273|transmembrane protein 100	CR607494|TMEM100|55273|transmembrane protein 100	CR626672|TMEM100|55273|transmembrane protein 100	AK001832|TMEM100|55273|transmembrane protein 100	CR601559|TMEM100|55273|transmembrane protein 100	NM_018286|TMEM100|55273|transmembrane protein 100
hg18_v1_chr12_-_43593977_43593977	0.10488	AAGUGCU	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr9_+_101623957_101623999	0.103724	AAGUGCU	D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3	NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3	NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3	AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3	X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3
hg18_v1_chr1_-_203868622_203868622	0.103041	AAGUGCU	NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)	NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)
hg18_v1_chr3_+_23962518_23962615	0.103019	AAGUGCU	AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr3_+_130730171_130730264	0.102869	AAGUGCU	NM_000539|RHO|6010|rhodopsin	BX537381|RHO|6010|rhodopsin	BC112104|RHO|6010|rhodopsin	BC112106|RHO|6010|rhodopsin	AM392780|RHO|6010|rhodopsin
hg18_v1_chr1_+_117950029_117950189	0.102615	AAGUGCU	NM_017709|FAM46C|54855|family with sequence similarity 46, member C
hg18_v1_chr20_-_35586366_35586366	0.102214	AAGUGCU	NM_001167823|BLCAP|10904|bladder cancer associated protein
hg18_v1_chr12_-_121577410_121577512	0.102181	AAGUGCU	CR606990|RSRC2|65117|arginine/serine-rich coiled-coil 2	CR591855|RSRC2|65117|arginine/serine-rich coiled-coil 2	BC008684|RSRC2|65117|arginine/serine-rich coiled-coil 2	CR623961|RSRC2|65117|arginine/serine-rich coiled-coil 2	CR600375|RSRC2|65117|arginine/serine-rich coiled-coil 2	AK056114|RSRC2|65117|arginine/serine-rich coiled-coil 2	BX640711|RSRC2|65117|arginine/serine-rich coiled-coil 2	CR615030|RSRC2|65117|arginine/serine-rich coiled-coil 2	AK056256|RSRC2|65117|arginine/serine-rich coiled-coil 2	BC067773|RSRC2|65117|arginine/serine-rich coiled-coil 2	AB212664|RSRC2|65117|arginine/serine-rich coiled-coil 2	AK094465|RSRC2|65117|arginine/serine-rich coiled-coil 2	NM_023012|RSRC2|65117|arginine/serine-rich coiled-coil 2
hg18_v1_chr9_-_129752687_129752818	0.10148	AAGUGCU	BC137087|FAM102A|399665|family with sequence similarity 102, member A	BC137088|FAM102A|399665|family with sequence similarity 102, member A	BC047949|FAM102A|399665|family with sequence similarity 102, member A	NM_203305|FAM102A|399665|family with sequence similarity 102, member A	BC142952|FAM102A|399665|family with sequence similarity 102, member A
hg18_v1_chr1_-_42573489_42573490	0.101251	AAGUGCU	BC063298|FOXJ3|22887|forkhead box J3	NM_014947|FOXJ3|22887|forkhead box J3
hg18_v1_chr6_-_166716449_166716551	0.0990447	AAGUGCU	AF125101|BRP44L|51660|brain protein 44-like	AF151887|BRP44L|51660|brain protein 44-like	NM_016098|BRP44L|51660|brain protein 44-like
hg18_v1_chr14_-_21049204_21049346	0.098582	AAGUGCU	EU446825|METTL3|56339|methyltransferase like 3	CR591863|METTL3|56339|methyltransferase like 3	CR613091|METTL3|56339|methyltransferase like 3	BC052244|METTL3|56339|methyltransferase like 3	CR591477|METTL3|56339|methyltransferase like 3	CR593531|METTL3|56339|methyltransferase like 3	CR598589|METTL3|56339|methyltransferase like 3	CR621767|METTL3|56339|methyltransferase like 3	CR626750|METTL3|56339|methyltransferase like 3	AK000222|METTL3|56339|methyltransferase like 3	CR600918|METTL3|56339|methyltransferase like 3	BC001650|METTL3|56339|methyltransferase like 3	BC003031|METTL3|56339|methyltransferase like 3	CR594281|METTL3|56339|methyltransferase like 3	BC014427|METTL3|56339|methyltransferase like 3	NM_019852|METTL3|56339|methyltransferase like 3	CR590636|METTL3|56339|methyltransferase like 3	CR606689|METTL3|56339|methyltransferase like 3	AK300289|METTL3|56339|methyltransferase like 3	AK304251|METTL3|56339|methyltransferase like 3	AK304570|METTL3|56339|methyltransferase like 3
hg18_v1_chr1_+_36121382_36121399	0.0982977	AAGUGCU	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr1_-_116185215_116185271	0.0978292	AAGUGCU	BC096359|NHLH2|4808|nescient helix loop helix 2	BC096360|NHLH2|4808|nescient helix loop helix 2	M96740|NHLH2|4808|nescient helix loop helix 2	NM_005599|NHLH2|4808|nescient helix loop helix 2
hg18_v1_chr6_-_42527760_42527842	0.0976572	AAGUGCU	AF297872|TRERF1|55809|transcriptional regulating factor 1	NM_033502|TRERF1|55809|transcriptional regulating factor 1	AM404182|TRERF1|55809|transcriptional regulating factor 1	AM404183|TRERF1|55809|transcriptional regulating factor 1	AM404259|TRERF1|55809|transcriptional regulating factor 1	AK308473|TRERF1|55809|transcriptional regulating factor 1
hg18_v1_chr14_+_72594940_72594984	0.0972454	AAGUGCU	BC062440|RBM25|58517|RNA binding motif protein 25	NM_021239|RBM25|58517|RNA binding motif protein 25
hg18_v1_chr11_+_32808045_32808208	0.0969108	AAGUGCU	BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
hg18_v1_chr10_+_104394185_104394364	0.0965551	AAGUGCU	NM_030912|TRIM8|81603|tripartite motif containing 8	BC021925|TRIM8|81603|tripartite motif containing 8	AF281046|TRIM8|81603|tripartite motif containing 8	AL360160|TRIM8|81603|tripartite motif containing 8	DQ892019|TRIM8|81603|tripartite motif containing 8	DQ895209|TRIM8|81603|tripartite motif containing 8	AF220034|TRIM8|81603|tripartite motif containing 8
hg18_v1_chr8_+_106400322_106400322	0.0964403	AAGUGCU	AF119334|ZFPM2|23414|zinc finger protein, multitype 2	BC109222|ZFPM2|23414|zinc finger protein, multitype 2	BC109223|ZFPM2|23414|zinc finger protein, multitype 2	NM_012082|ZFPM2|23414|zinc finger protein, multitype 2
hg18_v1_chr8_-_67687980_67688077	0.0961332	AAGUGCU	BC032233|LOC645895|645895|hypothetical LOC645895	NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1	NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1
hg18_v1_chr16_+_29892714_29892832	0.0952393	AAGUGCU	BC015204|TAOK2|9344|TAO kinase 2	NM_004783|TAOK2|9344|TAO kinase 2	NM_016151|TAOK2|9344|TAO kinase 2	BC054495|TAOK2|9344|TAO kinase 2	AF061943|TAOK2|9344|TAO kinase 2	BC051798|TAOK2|9344|TAO kinase 2
hg18_v1_chr15_-_62125562_62125755	0.0944809	AAGUGCU	BC114506|DAPK2|23604|death-associated protein kinase 2	BC114951|DAPK2|23604|death-associated protein kinase 2	AB018001|DAPK2|23604|death-associated protein kinase 2	AF052941|DAPK2|23604|death-associated protein kinase 2	NM_014326|DAPK2|23604|death-associated protein kinase 2	AK310967|DAPK2|23604|death-associated protein kinase 2
hg18_v1_chr13_+_19430906_19431025	0.0944438	AAGUGCU	AJ224901|ZMYM2|7750|zinc finger, MYM-type 2	BX647944|ZMYM2|7750|zinc finger, MYM-type 2	NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2
hg18_v1_chr19_-_41711009_41711087	0.093642	AAGUGCU	BC042676|ZNF260|339324|zinc finger protein 260	CR609031|ZNF260|339324|zinc finger protein 260	AK291442|ZNF260|339324|zinc finger protein 260	NM_001012756|ZNF260|339324|zinc finger protein 260	NM_001166036|ZNF260|339324|zinc finger protein 260	NM_001166037|ZNF260|339324|zinc finger protein 260	NM_001166038|ZNF260|339324|zinc finger protein 260
hg18_v1_chr3_+_14964080_14964239	0.0935935	AAGUGCU	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg18_v1_chr10_+_97879457_97879515	0.0929737	AAGUGCU	CR627437|ZNF518A|9849|zinc finger protein 518A	NM_014803|ZNF518A|9849|zinc finger protein 518A
hg18_v1_chr5_-_88215034_88215049	0.0921377	AAGUGCU	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr8_-_82186832_82186907	0.0915531	AAGUGCU	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1
hg18_v1_chr7_+_138566770_138566770	0.0908766	AAGUGCU	NM_173569|UBN2|254048|ubinuclein 2
hg18_v1_chr6_+_20510019_20510145	0.0904289	AAGUGCU	BC099908|E2F3|1871|E2F transcription factor 3	NM_001949|E2F3|1871|E2F transcription factor 3	CR597993|E2F3|1871|E2F transcription factor 3
hg18_v1_chr6_+_108987703_108987742	0.0903227	AAGUGCU	NM_201559|FOXO3|2309|forkhead box O3	BC020227|FOXO3|2309|forkhead box O3	BC021224|FOXO3|2309|forkhead box O3	CR623727|FOXO3|2309|forkhead box O3
hg18_v1_chr6_+_153060722_153060874	0.0895413	AAGUGCU	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	CR599312|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg18_v1_chr2_+_111594921_111594995	0.0889864	AAGUGCU	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)
hg18_v1_chr7_+_155129943_155129995	0.0879822	AAGUGCU	NM_053043|RBM33|155435|RNA binding motif protein 33
hg18_v1_chr2_+_210344945_210344961	0.0879687	AAGUGCU	AK090815|UNC80|285175|unc-80 homolog (C. elegans)	NM_032504|UNC80|285175|unc-80 homolog (C. elegans)	NM_182587|UNC80|285175|unc-80 homolog (C. elegans)
hg18_v1_chr1_-_16355013_16355214	0.0872233	AAGUGCU	EU826606|EPHA2|1969|EPH receptor A2	DQ895231|EPHA2|1969|EPH receptor A2	EU176326|EPHA2|1969|EPH receptor A2	M59371|EPHA2|1969|EPH receptor A2	BC037166|EPHA2|1969|EPH receptor A2	AK296788|EPHA2|1969|EPH receptor A2	NM_004431|EPHA2|1969|EPH receptor A2
hg18_v1_chr11_-_8636958_8636958	0.0866755	AAGUGCU	AB002296|TRIM66|9866|tripartite motif containing 66	NM_014818|TRIM66|9866|tripartite motif containing 66
hg18_v1_chr8_+_107807415_107807647	0.0857805	AAGUGCU	AK303695|OXR1|55074|oxidation resistance 1	NM_001198534|OXR1|55074|oxidation resistance 1	NM_001198535|OXR1|55074|oxidation resistance 1	AB075503|OXR1|55074|oxidation resistance 1	AK302844|OXR1|55074|oxidation resistance 1	CR596350|OXR1|55074|oxidation resistance 1	AK316153|OXR1|55074|oxidation resistance 1	FN650109|OXR1|55074|oxidation resistance 1
hg18_v1_chr1_-_42573470_42573485	0.0857575	AAGUGCU	BC014182|FOXJ3|22887|forkhead box J3	NM_001198852|FOXJ3|22887|forkhead box J3
hg18_v1_chrX_+_24077649_24077778	0.085313	AAGUGCU	AB209892|ZFX|7543|zinc finger protein, X-linked	NM_001178086|ZFX|7543|zinc finger protein, X-linked	NM_001178095|ZFX|7543|zinc finger protein, X-linked	X59738|ZFX|7543|zinc finger protein, X-linked	NM_001178084|ZFX|7543|zinc finger protein, X-linked	NM_001178085|ZFX|7543|zinc finger protein, X-linked	NM_003410|ZFX|7543|zinc finger protein, X-linked
hg18_v1_chr15_-_39195621_39195638	0.0853112	AAGUGCU	BC144681|INO80|54617|INO80 homolog (S. cerevisiae)	AB033085|INO80|54617|INO80 homolog (S. cerevisiae)	NM_017553|INO80|54617|INO80 homolog (S. cerevisiae)	BC146785|INO80|54617|INO80 homolog (S. cerevisiae)
hg18_v1_chr9_-_98220482_98220528	0.084227	AAGUGCU	AY554164|ZNF367|195828|zinc finger protein 367	AY554165|ZNF367|195828|zinc finger protein 367	NM_153695|ZNF367|195828|zinc finger protein 367
hg18_v1_chr19_+_4860447_4860551	0.0842219	AAGUGCU	AK307239|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1	AK303361|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1	NM_001048201|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1	AK074377|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1	AK314579|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1
hg18_v1_chr3_+_134775946_134775990	0.0842073	AAGUGCU	AK096865|CDV3|55573|CDV3 homolog (mouse)	NM_001134423|CDV3|55573|CDV3 homolog (mouse)
hg18_v1_chr4_+_74825138_74825239	0.084144	AAGUGCU	NM_000584|IL8|3576|interleukin 8	Y00787|IL8|3576|interleukin 8	AK131067|IL8|3576|interleukin 8	AK311874|IL8|3576|interleukin 8	M17017|IL8|3576|interleukin 8	CR594973|IL8|3576|interleukin 8	CR601902|IL8|3576|interleukin 8	CR603686|IL8|3576|interleukin 8	CR619554|IL8|3576|interleukin 8	CR623683|IL8|3576|interleukin 8	M26383|IL8|3576|interleukin 8	CR623827|IL8|3576|interleukin 8	CR600500|IL8|3576|interleukin 8	CR601533|IL8|3576|interleukin 8	BC013615|IL8|3576|interleukin 8	DQ890564|IL8|3576|interleukin 8	DQ893727|IL8|3576|interleukin 8	BT007067|IL8|3576|interleukin 8	CR542151|IL8|3576|interleukin 8	Z11686|IL8|3576|interleukin 8
hg18_v1_chr19_+_11510578_11510740	0.0840438	AAGUGCU	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	CR620483|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle	CR615873|CNN1|1264|calponin 1, basic, smooth muscle
hg18_v1_chr9_+_2611740_2611874	0.0831501	AAGUGCU	NM_001018056|VLDLR|7436|very low density lipoprotein receptor	NM_003383|VLDLR|7436|very low density lipoprotein receptor	L20470|VLDLR|7436|very low density lipoprotein receptor	AB208822|VLDLR|7436|very low density lipoprotein receptor
hg18_v1_chr19_-_41672176_41672304	0.0830175	AAGUGCU	AK027685|ZNF566|84924|zinc finger protein 566	NM_032838|ZNF566|84924|zinc finger protein 566	AK074497|ZNF566|84924|zinc finger protein 566	AK316262|ZNF566|84924|zinc finger protein 566	AK299393|ZNF566|84924|zinc finger protein 566	NM_001145343|ZNF566|84924|zinc finger protein 566	NM_001145344|ZNF566|84924|zinc finger protein 566	NM_001145345|ZNF566|84924|zinc finger protein 566
hg18_v1_chr9_-_19778590_19778608	0.0828273	AAGUGCU	NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg18_v1_chr9_-_134986108_134986533	0.0825397	AAGUGCU	AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator	GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator	GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator	AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator	NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator	BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator
hg18_v1_chr20_+_56318155_56318231	0.0817861	AAGUGCU	NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family	BC063457|RAB22A|57403|RAB22A, member RAS oncogene family	AF091034|RAB22A|57403|RAB22A, member RAS oncogene family	AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family	CR610918|RAB22A|57403|RAB22A, member RAS oncogene family
hg18_v1_chr2_+_170392146_170392263	0.0813402	AAGUGCU	NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg18_v1_chr12_-_24993548_24993659	0.0811942	AAGUGCU	AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr16_-_47201588_47201646	0.0801451	AAGUGCU	BC051897|N4BP1|9683|NEDD4 binding protein 1	AB014515|N4BP1|9683|NEDD4 binding protein 1	BC152472|N4BP1|9683|NEDD4 binding protein 1	NM_153029|N4BP1|9683|NEDD4 binding protein 1
hg18_v1_chr9_+_95886558_95886614	0.0801414	AAGUGCU	BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr7_-_6278662_6278851	0.0795576	AAGUGCU	DQ891736|CYTH3|9265|cytohesin 3	DQ894912|CYTH3|9265|cytohesin 3	EU176610|CYTH3|9265|cytohesin 3	AJ223957|CYTH3|9265|cytohesin 3	AJ005197|CYTH3|9265|cytohesin 3	NM_004227|CYTH3|9265|cytohesin 3	AK313728|CYTH3|9265|cytohesin 3	BC028717|CYTH3|9265|cytohesin 3
hg18_v1_chr1_-_44255583_44255598	0.0793357	AAGUGCU	NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg18_v1_chr5_+_140215778_140215817	0.078853	AAGUGCU	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg18_v1_chr5_+_140286485_140286485	0.0786259	AAGUGCU	NM_018898|PCDHAC1|56135|protocadherin alpha subfamily C, 1	NM_031882|PCDHAC1|56135|protocadherin alpha subfamily C, 1
hg18_v1_chr14_+_56116243_56116354	0.0786129	AAGUGCU	AK056291|C14orf101|54916|chromosome 14 open reading frame 101	NM_017799|C14orf101|54916|chromosome 14 open reading frame 101	BC045556|C14orf101|54916|chromosome 14 open reading frame 101	AK293099|C14orf101|54916|chromosome 14 open reading frame 101	AK295989|C14orf101|54916|chromosome 14 open reading frame 101	AK309920|C14orf101|54916|chromosome 14 open reading frame 101	BC008949|C14orf101|54916|chromosome 14 open reading frame 101	BC023579|C14orf101|54916|chromosome 14 open reading frame 101	BC121163|C14orf101|54916|chromosome 14 open reading frame 101	BC121164|C14orf101|54916|chromosome 14 open reading frame 101
hg18_v1_chr12_+_49080858_49081060	0.0784382	AAGUGCU	NM_001170803|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_001170804|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_001170808|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_052879|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_199188|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_199190|LARP4|113251|La ribonucleoprotein domain family, member 4	AL832198|LARP4|113251|La ribonucleoprotein domain family, member 4	CR936626|LARP4|113251|La ribonucleoprotein domain family, member 4	AL833272|LARP4|113251|La ribonucleoprotein domain family, member 4	BC022377|LARP4|113251|La ribonucleoprotein domain family, member 4	BC063479|LARP4|113251|La ribonucleoprotein domain family, member 4	AF370416|LARP4|113251|La ribonucleoprotein domain family, member 4	AK291746|LARP4|113251|La ribonucleoprotein domain family, member 4	AY004310|LARP4|113251|La ribonucleoprotein domain family, member 4	AK055521|LARP4|113251|La ribonucleoprotein domain family, member 4	BX647457|LARP4|113251|La ribonucleoprotein domain family, member 4	EU831655|LARP4|113251|La ribonucleoprotein domain family, member 4	EU831738|LARP4|113251|La ribonucleoprotein domain family, member 4	EU831909|LARP4|113251|La ribonucleoprotein domain family, member 4	EU832003|LARP4|113251|La ribonucleoprotein domain family, member 4
hg18_v1_chr2_-_239987557_239987613	0.0780901	AAGUGCU	AB006626|HDAC4|9759|histone deacetylase 4	NM_006037|HDAC4|9759|histone deacetylase 4
hg18_v1_chr18_+_41558089_41558115	0.0780862	AAGUGCU	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chr8_-_27751207_27751325	0.0779251	AAGUGCU	AF189722|PBK|55872|PDZ binding kinase	AB027250|PBK|55872|PDZ binding kinase	AK027291|PBK|55872|PDZ binding kinase	AF237709|PBK|55872|PDZ binding kinase	BC015191|PBK|55872|PDZ binding kinase	AB027249|PBK|55872|PDZ binding kinase	NM_018492|PBK|55872|PDZ binding kinase
hg18_v1_chr16_-_45212804_45212811	0.0775821	AAGUGCU	NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1
hg18_v1_chr16_-_4263001_4263026	0.0772455	AAGUGCU	NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)
hg18_v1_chr5_+_112101454_112101490	0.0765413	AAGUGCU	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg18_v1_chr1_+_88922424_88922943	0.0763707	AAGUGCU	NM_006256|PKN2|5586|protein kinase N2	AK300304|PKN2|5586|protein kinase N2	AK298595|PKN2|5586|protein kinase N2	BC125199|PKN2|5586|protein kinase N2	S75548|PKN2|5586|protein kinase N2	U33052|PKN2|5586|protein kinase N2
hg18_v1_chr10_+_98730977_98731137	0.0763098	AAGUGCU	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg18_v1_chr6_-_167195647_167195790	0.0762281	AAGUGCU	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr12_-_43555607_43555710	0.0759905	AAGUGCU	D89629|NELL2|4753|NEL-like 2 (chicken)	AK315960|NELL2|4753|NEL-like 2 (chicken)	AK299277|NELL2|4753|NEL-like 2 (chicken)	NM_001145109|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr9_-_99974994_99974994	0.0742339	AAGUGCU	NM_003389|CORO2A|7464|coronin, actin binding protein, 2A
hg18_v1_chr1_-_234511917_234511961	0.0741442	AAGUGCU	AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)	NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)
hg18_v1_chr3_-_50580066_50580228	0.0734112	AAGUGCU	AK124438|C3orf18|51161|chromosome 3 open reading frame 18	AK311093|C3orf18|51161|chromosome 3 open reading frame 18	BC034766|C3orf18|51161|chromosome 3 open reading frame 18	AK313128|C3orf18|51161|chromosome 3 open reading frame 18	AK308074|C3orf18|51161|chromosome 3 open reading frame 18	AK309486|C3orf18|51161|chromosome 3 open reading frame 18	AL833938|C3orf18|51161|chromosome 3 open reading frame 18	AK130227|C3orf18|51161|chromosome 3 open reading frame 18	NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18	NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18	NM_016210|C3orf18|51161|chromosome 3 open reading frame 18
hg18_v1_chr2_+_165860528_165860528	0.0733964	AAGUGCU	NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr1_+_202752084_202752167	0.072787	AAGUGCU	BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)
hg18_v1_chr16_-_52094613_52094670	0.0726462	AAGUGCU	AK303503|AKTIP|64400|AKT interacting protein	BC001134|AKTIP|64400|AKT interacting protein	BC095401|AKTIP|64400|AKT interacting protein	AK222743|AKTIP|64400|AKT interacting protein	AK023320|AKTIP|64400|AKT interacting protein	NM_001012398|AKTIP|64400|AKT interacting protein	NM_022476|AKTIP|64400|AKT interacting protein
hg18_v1_chr11_-_62251361_62251486	0.0723957	AAGUGCU	DQ470474|HNRNPUL2|221092|heterogeneous nuclear ribonucleoprotein U-like 2	NM_001079559|HNRNPUL2|221092|heterogeneous nuclear ribonucleoprotein U-like 2
hg18_v1_chr3_+_197951121_197951124	0.0723112	AAGUGCU	NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr1_+_65385799_65386100	0.072056	AAGUGCU	NM_203464|AK4|205|adenylate kinase 4	BC146653|AK4|205|adenylate kinase 4	BC016180|AK4|205|adenylate kinase 4	AK309057|AK4|205|adenylate kinase 4	BC066944|AK4|205|adenylate kinase 4	NM_001005353|AK4|205|adenylate kinase 4
hg18_v1_chr12_-_54938385_54938447	0.0717756	AAGUGCU	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr5_+_140235114_140235241	0.0712782	AAGUGCU	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12
hg18_v1_chr8_-_57286412_57286419	0.0707471	AAGUGCU	AK296933|PLAG1|5324|pleiomorphic adenoma gene 1	AK313663|PLAG1|5324|pleiomorphic adenoma gene 1	NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1	NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1	NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1
hg18_v1_chr2_+_14690260_14690285	0.0701453	AAGUGCU	NM_145175|FAM84A|151354|family with sequence similarity 84, member A
hg18_v1_chr17_-_45110339_45110523	0.0697921	AAGUGCU	BC003385|SPOP|8405|speckle-type POZ protein	CR595475|SPOP|8405|speckle-type POZ protein	CR603514|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	CR592684|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	CR590571|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg18_v1_chr2_+_239000306_239000384	0.0696084	AAGUGCU	BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1	NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1
hg18_v1_chr7_-_92303865_92303876	0.069422	AAGUGCU	NM_001145306|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr11_-_105398118_105398221	0.0691631	AAGUGCU	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg18_v1_chr17_+_71229110_71229142	0.0687083	AAGUGCU	NM_000213|ITGB4|3691|integrin, beta 4	NM_001005731|ITGB4|3691|integrin, beta 4	X53587|ITGB4|3691|integrin, beta 4
hg18_v1_chr19_-_17047228_17047414	0.0683409	AAGUGCU	CR615424|HAUS8|93323|HAUS augmin-like complex, subunit 8	BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8	CR605479|HAUS8|93323|HAUS augmin-like complex, subunit 8	CR594325|HAUS8|93323|HAUS augmin-like complex, subunit 8	AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8	CR622261|HAUS8|93323|HAUS augmin-like complex, subunit 8	NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8	NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8	AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8
hg18_v1_chr17_+_52266451_52266556	0.0682963	AAGUGCU	CR622919|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	NM_003647|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	BC022297|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	AK310668|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	AK293039|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	U49379|DGKE|8526|diacylglycerol kinase, epsilon 64kDa
hg18_v1_chr9_+_124742932_124743167	0.0682802	AAGUGCU	AK131449|RABGAP1|23637|RAB GTPase activating protein 1	BC020609|RABGAP1|23637|RAB GTPase activating protein 1	NM_012197|RABGAP1|23637|RAB GTPase activating protein 1	AK022408|RABGAP1|23637|RAB GTPase activating protein 1	BC054492|RABGAP1|23637|RAB GTPase activating protein 1	AF161357|RABGAP1|23637|RAB GTPase activating protein 1	AJ011679|RABGAP1|23637|RAB GTPase activating protein 1
hg18_v1_chr10_-_103805858_103805947	0.0677971	AAGUGCU	BC032118|C10orf76|79591|chromosome 10 open reading frame 76	NM_024541|C10orf76|79591|chromosome 10 open reading frame 76	BC054882|C10orf76|79591|chromosome 10 open reading frame 76
hg18_v1_chr9_+_33807168_33807200	0.0676049	AAGUGCU	NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2
hg18_v1_chr16_+_24458349_24458440	0.0671048	AAGUGCU	NM_006910|RBBP6|5930|retinoblastoma binding protein 6	NM_018703|RBBP6|5930|retinoblastoma binding protein 6	NM_032626|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr9_-_124715392_124715429	0.0670523	AAGUGCU	X82018|ZBTB6|10773|zinc finger and BTB domain containing 6	CR607983|ZBTB6|10773|zinc finger and BTB domain containing 6	AK292401|ZBTB6|10773|zinc finger and BTB domain containing 6	BC037282|ZBTB6|10773|zinc finger and BTB domain containing 6	NM_006626|ZBTB6|10773|zinc finger and BTB domain containing 6
hg18_v1_chr18_-_17538735_17538763	0.0666446	AAGUGCU	CR605248|ABHD3|171586|abhydrolase domain containing 3	NM_138340|ABHD3|171586|abhydrolase domain containing 3
hg18_v1_chr7_-_92301147_92301166	0.066601	AAGUGCU	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr5_+_140187746_140187860	0.0662731	AAGUGCU	BC036674|PCDHA6|56142|protocadherin alpha 6	AF169694|PCDHA6|56142|protocadherin alpha 6	NM_018909|PCDHA6|56142|protocadherin alpha 6	NM_031848|PCDHA6|56142|protocadherin alpha 6	NM_031849|PCDHA6|56142|protocadherin alpha 6	AF152314|PCDHA6|56142|protocadherin alpha 6	AF152484|PCDHA6|56142|protocadherin alpha 6
hg18_v1_chr2_+_179053440_179053459	0.0655875	AAGUGCU	AK314459|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3	NM_019091|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg18_v1_chr17_-_16059514_16059617	0.0655348	AAGUGCU	BC056862|NCOR1|9611|nuclear receptor corepressor 1	BC035748|NCOR1|9611|nuclear receptor corepressor 1	BC142648|NCOR1|9611|nuclear receptor corepressor 1	BC026028|NCOR1|9611|nuclear receptor corepressor 1	AK307614|NCOR1|9611|nuclear receptor corepressor 1	AF044209|NCOR1|9611|nuclear receptor corepressor 1	BC050594|NCOR1|9611|nuclear receptor corepressor 1	BC068996|NCOR1|9611|nuclear receptor corepressor 1	BC058511|NCOR1|9611|nuclear receptor corepressor 1	BC107772|NCOR1|9611|nuclear receptor corepressor 1	NM_006311|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr12_+_8126063_8126173	0.0650811	AAGUGCU	NM_015509|NECAP1|25977|NECAP endocytosis associated 1	AK074880|NECAP1|25977|NECAP endocytosis associated 1	AK074858|NECAP1|25977|NECAP endocytosis associated 1	AK074923|NECAP1|25977|NECAP endocytosis associated 1	AK303675|NECAP1|25977|NECAP endocytosis associated 1	AK314424|NECAP1|25977|NECAP endocytosis associated 1	BC110876|NECAP1|25977|NECAP endocytosis associated 1	AL050272|NECAP1|25977|NECAP endocytosis associated 1	AK290537|NECAP1|25977|NECAP endocytosis associated 1	BC002888|NECAP1|25977|NECAP endocytosis associated 1
hg18_v1_chr6_+_152170146_152170146	0.064893	AAGUGCU	NM_001122740|ESR1|2099|estrogen receptor 1	U68067|ESR1|2099|estrogen receptor 1
hg18_v1_chr13_-_19633182_19633182	0.0646853	AAGUGCU	NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa
hg18_v1_chr1_-_77457664_77457719	0.0645799	AAGUGCU	Y07596|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	CR614831|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	AF022913|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	BC020737|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	BC026186|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	AK304340|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	AK313015|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	BX648473|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	NM_005482|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K
hg18_v1_chr9_-_14388981_14388981	0.0644167	AAGUGCU	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr16_-_51138306_51138306	0.0641666	AAGUGCU	NM_001080430|TOX3|27324|TOX high mobility group box family member 3
hg18_v1_chr1_+_87152905_87152977	0.0638703	AAGUGCU	BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1
hg18_v1_chr10_-_79067552_79067586	0.0638119	AAGUGCU	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg18_v1_chr6_+_18263514_18263755	0.0637408	AAGUGCU	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chr5_-_118352122_118352152	0.063286	AAGUGCU	BC114508|DTWD2|285605|DTW domain containing 2	BC114955|DTWD2|285605|DTW domain containing 2	AK091296|DTWD2|285605|DTW domain containing 2	NM_173666|DTWD2|285605|DTW domain containing 2
hg18_v1_chr5_+_140166842_140166956	0.0623184	AAGUGCU	AB208925|PCDHA4|56144|protocadherin alpha 4	NM_018907|PCDHA4|56144|protocadherin alpha 4	NM_031500|PCDHA4|56144|protocadherin alpha 4	BC112102|PCDHA4|56144|protocadherin alpha 4	BC113609|PCDHA4|56144|protocadherin alpha 4	AF152312|PCDHA4|56144|protocadherin alpha 4	AF152482|PCDHA4|56144|protocadherin alpha 4
hg18_v1_chr5_-_137576928_137576933	0.061958	AAGUGCU	AK304635|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)	NM_004661|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)
hg18_v1_chr5_+_140325930_140326003	0.0617582	AAGUGCU	NM_018899|PCDHAC2|56134|protocadherin alpha subfamily C, 2	AK123867|PCDHAC2|56134|protocadherin alpha subfamily C, 2
hg18_v1_chr11_+_22316242_22316242	0.0616766	AAGUGCU	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg18_v1_chr17_-_38014930_38014970	0.0616593	AAGUGCU	NM_178126|FAM134C|162427|family with sequence similarity 134, member C
hg18_v1_chr10_+_115793795_115793804	0.0599276	AAGUGCU	NM_000684|ADRB1|153|adrenergic, beta-1-, receptor	J03019|ADRB1|153|adrenergic, beta-1-, receptor
hg18_v1_chr11_+_117906965_117907012	0.0597973	AAGUGCU	NM_001144034|TMEM25|84866|transmembrane protein 25	NM_001144035|TMEM25|84866|transmembrane protein 25	NM_001144036|TMEM25|84866|transmembrane protein 25	NM_001144037|TMEM25|84866|transmembrane protein 25	NM_001144038|TMEM25|84866|transmembrane protein 25	NM_032780|TMEM25|84866|transmembrane protein 25
hg18_v1_chr7_+_128861471_128861548	0.0589561	AAGUGCU	NM_001134336|FAM40B|57464|family with sequence similarity 40, member B	NM_020704|FAM40B|57464|family with sequence similarity 40, member B	AK290165|FAM40B|57464|family with sequence similarity 40, member B	BC019064|FAM40B|57464|family with sequence similarity 40, member B	AB032996|FAM40B|57464|family with sequence similarity 40, member B	AM392619|FAM40B|57464|family with sequence similarity 40, member B	AM392944|FAM40B|57464|family with sequence similarity 40, member B	AM392960|FAM40B|57464|family with sequence similarity 40, member B	AM393447|FAM40B|57464|family with sequence similarity 40, member B
hg18_v1_chr7_-_75206212_75206281	0.0585733	AAGUGCU	AF486833|HIP1|3092|huntingtin interacting protein 1	NM_005338|HIP1|3092|huntingtin interacting protein 1
hg18_v1_chr14_+_102870245_102870281	0.0584971	AAGUGCU	NM_001969|EIF5|1983|eukaryotic translation initiation factor 5
hg18_v1_chr5_+_89806436_89806481	0.0584858	AAGUGCU	NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)	AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)	U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg18_v1_chr7_+_86619580_86619719	0.0574335	AAGUGCU	NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1	NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1	AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1	AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1	AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1	AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1	AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1	AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1	AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1
hg18_v1_chr13_+_94052022_94052185	0.0574052	AAGUGCU	NM_180989|GPR180|160897|G protein-coupled receptor 180	BC033906|GPR180|160897|G protein-coupled receptor 180	BC052243|GPR180|160897|G protein-coupled receptor 180	AK126794|GPR180|160897|G protein-coupled receptor 180
hg18_v1_chr1_-_222688623_222688623	0.0573966	AAGUGCU	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg18_v1_chr5_+_140181405_140181544	0.0571565	AAGUGCU	BC033735|PCDHA5|56143|protocadherin alpha 5	AF152313|PCDHA5|56143|protocadherin alpha 5	AF152483|PCDHA5|56143|protocadherin alpha 5	NM_018908|PCDHA5|56143|protocadherin alpha 5	NM_031501|PCDHA5|56143|protocadherin alpha 5
hg18_v1_chr11_-_65187003_65187031	0.057125	AAGUGCU	NM_001145138|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	NM_021975|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
hg18_v1_chrX_+_23262905_23263058	0.0569441	AAGUGCU	AK298796|PTCHD1|139411|patched domain containing 1	NM_173495|PTCHD1|139411|patched domain containing 1	AK054858|PTCHD1|139411|patched domain containing 1	BC121061|PTCHD1|139411|patched domain containing 1
hg18_v1_chr14_-_104333123_104333130	0.0563524	AAGUGCU	NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1
hg18_v1_chr1_-_113051200_113051246	0.056129	AAGUGCU	NM_001042679|RHOC|389|ras homolog gene family, member C	BC052808|RHOC|389|ras homolog gene family, member C	BC007245|RHOC|389|ras homolog gene family, member C	BC009177|RHOC|389|ras homolog gene family, member C	BX648784|RHOC|389|ras homolog gene family, member C
hg18_v1_chr3_-_126576693_126576887	0.0558752	AAGUGCU	AF039019|ZNF148|7707|zinc finger protein 148	AL833616|ZNF148|7707|zinc finger protein 148	AF432210|ZNF148|7707|zinc finger protein 148	AJ236885|ZNF148|7707|zinc finger protein 148	L04282|ZNF148|7707|zinc finger protein 148	BC035591|ZNF148|7707|zinc finger protein 148	BC018971|ZNF148|7707|zinc finger protein 148	AK314203|ZNF148|7707|zinc finger protein 148	BC050260|ZNF148|7707|zinc finger protein 148	NM_021964|ZNF148|7707|zinc finger protein 148
hg18_v1_chr20_+_35583020_35583163	0.054594	AAGUGCU	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	CR611594|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	CR593008|NNAT|4826|neuronatin	CR597280|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	CR615297|NNAT|4826|neuronatin	CR622140|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	CR598063|NNAT|4826|neuronatin	CR620236|NNAT|4826|neuronatin	CR599948|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin	CR601930|NNAT|4826|neuronatin
hg18_v1_chr14_+_66777578_66778255	0.0543271	AAGUGCU	BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg18_v1_chr8_-_27686015_27686092	0.0539018	AAGUGCU	BC006239|CCDC25|55246|coiled-coil domain containing 25	BC054039|CCDC25|55246|coiled-coil domain containing 25	BC065295|CCDC25|55246|coiled-coil domain containing 25	BC110391|CCDC25|55246|coiled-coil domain containing 25	CR606061|CCDC25|55246|coiled-coil domain containing 25	AK027900|CCDC25|55246|coiled-coil domain containing 25	AK316015|CCDC25|55246|coiled-coil domain containing 25	BC049197|CCDC25|55246|coiled-coil domain containing 25	AK311437|CCDC25|55246|coiled-coil domain containing 25	BC032588|CCDC25|55246|coiled-coil domain containing 25	AK292875|CCDC25|55246|coiled-coil domain containing 25	AK294848|CCDC25|55246|coiled-coil domain containing 25	AK001715|CCDC25|55246|coiled-coil domain containing 25	NM_018246|CCDC25|55246|coiled-coil domain containing 25
hg18_v1_chr2_-_144806508_144806561	0.0537099	AAGUGCU	BX647773|GTDC1|79712|glycosyltransferase-like domain containing 1	BX647436|GTDC1|79712|glycosyltransferase-like domain containing 1	NM_001164629|GTDC1|79712|glycosyltransferase-like domain containing 1
hg18_v1_chr3_+_190831909_190831998	0.0535675	AAGUGCU	BC039815|TP63|8626|tumor protein p63	NM_001114978|TP63|8626|tumor protein p63	NM_001114979|TP63|8626|tumor protein p63	NM_003722|TP63|8626|tumor protein p63	AB016072|TP63|8626|tumor protein p63	AB016073|TP63|8626|tumor protein p63	AF116771|TP63|8626|tumor protein p63	Y16961|TP63|8626|tumor protein p63	EU446669|TP63|8626|tumor protein p63
hg18_v1_chr1_+_200191241_200191282	0.0535463	AAGUGCU	NM_006335|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	BC015098|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	AK315602|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	BC009784|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	BC007106|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	BC020833|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	X97544|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	CR619422|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	CR622416|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	AF106622|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	BC000294|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	BC004439|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	BC013823|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)
hg18_v1_chr2_-_174537021_174537215	0.053161	AAGUGCU	AY070137|SP3|6670|Sp3 transcription factor	NM_001017371|SP3|6670|Sp3 transcription factor
hg18_v1_chr9_+_73954100_73954112	0.0529503	AAGUGCU	BC053584|GDA|9615|guanine deaminase	NM_004293|GDA|9615|guanine deaminase
hg18_v1_chr5_+_74843336_74843649	0.052688	AAGUGCU	AF163570|POLK|51426|polymerase (DNA directed) kappa	NM_016218|POLK|51426|polymerase (DNA directed) kappa	AK091659|POLK|51426|polymerase (DNA directed) kappa	AK314610|POLK|51426|polymerase (DNA directed) kappa	AK026316|POLK|51426|polymerase (DNA directed) kappa	AF194973|POLK|51426|polymerase (DNA directed) kappa	AF318313|POLK|51426|polymerase (DNA directed) kappa
hg18_v1_chr1_+_11962824_11963017	0.0519391	AAGUGCU	NM_001127660|MFN2|9927|mitofusin 2	NM_014874|MFN2|9927|mitofusin 2	AK289828|MFN2|9927|mitofusin 2	AF036536|MFN2|9927|mitofusin 2	AK021947|MFN2|9927|mitofusin 2	D86987|MFN2|9927|mitofusin 2
hg18_v1_chr1_+_208178160_208178186	0.0513857	AAGUGCU	NM_001146261|SYT14|255928|synaptotagmin XIV	NM_001146262|SYT14|255928|synaptotagmin XIV	NM_001146264|SYT14|255928|synaptotagmin XIV	NM_153262|SYT14|255928|synaptotagmin XIV
hg18_v1_chr10_+_102285562_102285688	0.0511671	AAGUGCU	AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor	NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor	AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor
hg18_v1_chr3_-_50583425_50583461	0.0503091	AAGUGCU	AF188706|C3orf18|51161|chromosome 3 open reading frame 18	NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18
hg18_v1_chr4_-_6253152_6253218	0.0493479	AAGUGCU	AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1	NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1
hg18_v1_chr2_+_190753833_190753938	0.0493306	AAGUGCU	NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88	BC005083|C2orf88|84281|chromosome 2 open reading frame 88	NM_032321|C2orf88|84281|chromosome 2 open reading frame 88	AK313395|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr10_+_115604374_115604444	0.0491527	AAGUGCU	NM_198514|NHLRC2|374354|NHL repeat containing 2	AK090631|NHLRC2|374354|NHL repeat containing 2
hg18_v1_chr16_-_65343012_65343115	0.0489504	AAGUGCU	BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2
hg18_v1_chr10_-_27571047_27571129	0.0487957	AAGUGCU	AK057469|ACBD5|91452|acyl-CoA binding domain containing 5	AF505653|ACBD5|91452|acyl-CoA binding domain containing 5	NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5
hg18_v1_chr5_-_88155360_88155499	0.0482423	AAGUGCU	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr11_-_47620590_47620788	0.0480806	AAGUGCU	DQ891810|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	DQ894993|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK223097|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR625977|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	BC000875|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AY380792|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AF085361|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AF176008|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK295218|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR619866|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR606794|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	AK313032|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	CR618818|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)	NM_014342|MTCH2|23788|mitochondrial carrier homolog 2 (C. elegans)
hg18_v1_chr9_-_139316523_139316559	0.0479646	AAGUGCU	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg18_v1_chr13_-_25693927_25694027	0.0477483	AAGUGCU	BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6	AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6	AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg18_v1_chr12_+_93066370_93066900	0.0477436	AAGUGCU	AF030339|PLXNC1|10154|plexin C1	NM_005761|PLXNC1|10154|plexin C1	BC029934|PLXNC1|10154|plexin C1
hg18_v1_chr15_-_72986514_72986514	0.0477255	AAGUGCU	NM_020447|C15orf17|57184|chromosome 15 open reading frame 17
hg18_v1_chr6_-_24491498_24491498	0.0473699	AAGUGCU	BC050704|DCDC2|51473|doublecortin domain containing 2	NM_001195610|DCDC2|51473|doublecortin domain containing 2
hg18_v1_chr1_-_113051545_113051554	0.0469253	AAGUGCU	NM_001042678|RHOC|389|ras homolog gene family, member C	NM_175744|RHOC|389|ras homolog gene family, member C
hg18_v1_chr9_-_19092898_19092905	0.0462991	AAGUGCU	AL832495|HAUS6|54801|HAUS augmin-like complex, subunit 6	BC026178|HAUS6|54801|HAUS augmin-like complex, subunit 6	AF537091|HAUS6|54801|HAUS augmin-like complex, subunit 6	AK056458|HAUS6|54801|HAUS augmin-like complex, subunit 6	NM_017645|HAUS6|54801|HAUS augmin-like complex, subunit 6
hg18_v1_chr1_+_160733587_160733587	0.0460203	AAGUGCU	AK058195|UHMK1|127933|U2AF homology motif (UHM) kinase 1	NM_001184763|UHMK1|127933|U2AF homology motif (UHM) kinase 1
hg18_v1_chr17_-_5078773_5078878	0.0456942	AAGUGCU	DQ778084|C17orf87|388325|chromosome 17 open reading frame 87	AK297035|C17orf87|388325|chromosome 17 open reading frame 87	BC130554|C17orf87|388325|chromosome 17 open reading frame 87	BC130556|C17orf87|388325|chromosome 17 open reading frame 87	BC144395|C17orf87|388325|chromosome 17 open reading frame 87	NM_207103|C17orf87|388325|chromosome 17 open reading frame 87	BC127925|C17orf87|388325|chromosome 17 open reading frame 87	AK057142|C17orf87|388325|chromosome 17 open reading frame 87	CR612993|C17orf87|388325|chromosome 17 open reading frame 87	AY358809|C17orf87|388325|chromosome 17 open reading frame 87	AK310145|C17orf87|388325|chromosome 17 open reading frame 87
hg18_v1_chr1_-_70592951_70593036	0.0454659	AAGUGCU	BC016937|ANKRD13C|81573|ankyrin repeat domain 13C	BC028840|ANKRD13C|81573|ankyrin repeat domain 13C	AL136717|ANKRD13C|81573|ankyrin repeat domain 13C	NM_030816|ANKRD13C|81573|ankyrin repeat domain 13C
hg18_v1_chr7_+_99451110_99451213	0.0453721	AAGUGCU	AL833578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	NM_003439|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	AF454940|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	AK054676|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	AY260738|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	BC022378|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	BX640646|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	AK091471|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	AK074116|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1
hg18_v1_chr7_+_28692122_28692294	0.0451852	AAGUGCU	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr12_+_103374771_103374878	0.045054	AAGUGCU	NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11
hg18_v1_chr8_-_53789544_53789588	0.0447754	AAGUGCU	AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1	NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1	NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1
hg18_v1_chr14_+_101675888_101676039	0.0446667	AAGUGCU	BC030654|WDR20|91833|WD repeat domain 20	NM_144574|WDR20|91833|WD repeat domain 20	NM_181291|WDR20|91833|WD repeat domain 20	NM_181302|WDR20|91833|WD repeat domain 20	NM_181308|WDR20|91833|WD repeat domain 20	AK090580|WDR20|91833|WD repeat domain 20	AK225852|WDR20|91833|WD repeat domain 20	BC028387|WDR20|91833|WD repeat domain 20	AK090978|WDR20|91833|WD repeat domain 20	AK297727|WDR20|91833|WD repeat domain 20	AL832242|WDR20|91833|WD repeat domain 20	AL832500|WDR20|91833|WD repeat domain 20	DQ891530|WDR20|91833|WD repeat domain 20	DQ894719|WDR20|91833|WD repeat domain 20	EU831767|WDR20|91833|WD repeat domain 20	EU831845|WDR20|91833|WD repeat domain 20	AF327354|WDR20|91833|WD repeat domain 20	BX248274|WDR20|91833|WD repeat domain 20
hg18_v1_chr2_-_85969527_85969667	0.0446092	AAGUGCU	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg18_v1_chr19_+_60543032_60543112	0.0445789	AAGUGCU	AK308586|SUV420H2|84787|suppressor of variegation 4-20 homolog 2 (Drosophila)	NM_032701|SUV420H2|84787|suppressor of variegation 4-20 homolog 2 (Drosophila)	BC044889|SUV420H2|84787|suppressor of variegation 4-20 homolog 2 (Drosophila)
hg18_v1_chr13_-_50925275_50925412	0.0441772	AAGUGCU	NM_001039937|INTS6|26512|integrator complex subunit 6	NM_001039938|INTS6|26512|integrator complex subunit 6	NM_012141|INTS6|26512|integrator complex subunit 6	AL833524|INTS6|26512|integrator complex subunit 6
hg18_v1_chr1_+_84316217_84316632	0.0440875	AAGUGCU	AK074904|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	BC035058|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_002731|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_207578|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK314550|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	BC016285|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	M34181|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM392526|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM393233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM393317|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM393497|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	EU832783|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	GQ129404|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB451239|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB451364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg18_v1_chr2_+_69910277_69910345	0.0439243	AAGUGCU	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg18_v1_chr1_+_108904493_108904637	0.0438703	AAGUGCU	BC127898|FAM102B|284611|family with sequence similarity 102, member B	BC150530|FAM102B|284611|family with sequence similarity 102, member B	NM_001010883|FAM102B|284611|family with sequence similarity 102, member B	BC140863|FAM102B|284611|family with sequence similarity 102, member B	BC140865|FAM102B|284611|family with sequence similarity 102, member B
hg18_v1_chr1_+_65386359_65386514	0.0432441	AAGUGCU	NM_013410|AK4|205|adenylate kinase 4	AK025926|AK4|205|adenylate kinase 4	AK313611|AK4|205|adenylate kinase 4	X60673|AK4|205|adenylate kinase 4
hg18_v1_chr4_-_17632456_17632672	0.0429238	AAGUGCU	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like	BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like	AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like	NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like	NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like
hg18_v1_chr13_-_45524846_45524922	0.0427091	AAGUGCU	BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13	AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13	AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13	NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13
hg18_v1_chr10_+_23768203_23768229	0.0425773	AAGUGCU	AB188491|OTUD1|220213|OTU domain containing 1	NM_001145373|OTUD1|220213|OTU domain containing 1
hg18_v1_chr12_+_49728350_49728420	0.0423623	AAGUGCU	AF329277|LETMD1|25875|LETM1 domain containing 1	NM_001024668|LETMD1|25875|LETM1 domain containing 1	NM_015416|LETMD1|25875|LETM1 domain containing 1	AK301955|LETMD1|25875|LETM1 domain containing 1	AF195651|LETMD1|25875|LETM1 domain containing 1	AK000639|LETMD1|25875|LETM1 domain containing 1	AK304707|LETMD1|25875|LETM1 domain containing 1	AK315119|LETMD1|25875|LETM1 domain containing 1	AK127540|LETMD1|25875|LETM1 domain containing 1	AK301898|LETMD1|25875|LETM1 domain containing 1	AK225836|LETMD1|25875|LETM1 domain containing 1	CR605694|LETMD1|25875|LETM1 domain containing 1	CR603920|LETMD1|25875|LETM1 domain containing 1	CR612978|LETMD1|25875|LETM1 domain containing 1	CR600835|LETMD1|25875|LETM1 domain containing 1	CR618203|LETMD1|25875|LETM1 domain containing 1	CR623560|LETMD1|25875|LETM1 domain containing 1	BC064943|LETMD1|25875|LETM1 domain containing 1	AK057866|LETMD1|25875|LETM1 domain containing 1	AF315598|LETMD1|25875|LETM1 domain containing 1	AY259835|LETMD1|25875|LETM1 domain containing 1	AY259836|LETMD1|25875|LETM1 domain containing 1	CR590466|LETMD1|25875|LETM1 domain containing 1	CR591933|LETMD1|25875|LETM1 domain containing 1	CR595375|LETMD1|25875|LETM1 domain containing 1	CR596903|LETMD1|25875|LETM1 domain containing 1
hg18_v1_chr5_+_140194152_140194152	0.0419616	AAGUGCU	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg18_v1_chr2_-_166359016_166359048	0.0415174	AAGUGCU	NM_004482|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg18_v1_chr8_+_35212505_35212553	0.0414758	AAGUGCU	AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)	NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)
hg18_v1_chr11_+_9551759_9551820	0.0414259	AAGUGCU	NM_003390|WEE1|7465|WEE1 homolog (S. pombe)	U10564|WEE1|7465|WEE1 homolog (S. pombe)	BC070052|WEE1|7465|WEE1 homolog (S. pombe)
hg18_v1_chr3_-_101316038_101316046	0.0413846	AAGUGCU	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr17_-_34015631_34015814	0.04129	AAGUGCU	AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1	NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1
hg18_v1_chr13_+_77170470_77170470	0.0409459	AAGUGCU	NM_001040153|SLAIN1|122060|SLAIN motif family, member 1
hg18_v1_chr2_+_191453791_191453791	0.0402205	AAGUGCU	AK289747|GLS|2744|glutaminase	NM_014905|GLS|2744|glutaminase
hg18_v1_chr4_-_171184003_171184157	0.0401181	AAGUGCU	AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like	NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like	AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like
hg18_v1_chr1_+_165456572_165456790	0.0398089	AAGUGCU	NM_001198786|POU2F1|5451|POU class 2 homeobox 1	NM_002697|POU2F1|5451|POU class 2 homeobox 1	AK302525|POU2F1|5451|POU class 2 homeobox 1	AK303201|POU2F1|5451|POU class 2 homeobox 1	AK308004|POU2F1|5451|POU class 2 homeobox 1	AK091438|POU2F1|5451|POU class 2 homeobox 1	BC052274|POU2F1|5451|POU class 2 homeobox 1	X13403|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr2_+_198377561_198377670	0.0395988	AAGUGCU	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg18_v1_chr14_-_74249492_74249566	0.0391077	AAGUGCU	CR600611|KIAA0317|9870|KIAA0317	AB002315|KIAA0317|9870|KIAA0317	AK304217|KIAA0317|9870|KIAA0317	AK296912|KIAA0317|9870|KIAA0317	BX248747|KIAA0317|9870|KIAA0317	BC032944|KIAA0317|9870|KIAA0317	NM_001039479|KIAA0317|9870|KIAA0317
hg18_v1_chr9_+_130839033_130839073	0.0390749	AAGUGCU	AK303036|FAM73B|84895|family with sequence similarity 73, member B	BC009114|FAM73B|84895|family with sequence similarity 73, member B	NM_032809|FAM73B|84895|family with sequence similarity 73, member B
hg18_v1_chr5_-_16232896_16232896	0.0390698	AAGUGCU	NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11
hg18_v1_chr1_-_57057956_57057967	0.0385048	AAGUGCU	AK125198|C1orf168|199920|chromosome 1 open reading frame 168	NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168
hg18_v1_chr6_-_32034607_32034842	0.038166	AAGUGCU	AK302652|RDBP|7936|RD RNA binding protein	CR620889|RDBP|7936|RD RNA binding protein	CR626781|RDBP|7936|RD RNA binding protein	CR625999|RDBP|7936|RD RNA binding protein	CR606109|RDBP|7936|RD RNA binding protein	CR608765|RDBP|7936|RD RNA binding protein	BC025235|RDBP|7936|RD RNA binding protein	CR592359|RDBP|7936|RD RNA binding protein	CR609166|RDBP|7936|RD RNA binding protein	BC050617|RDBP|7936|RD RNA binding protein	CR599173|RDBP|7936|RD RNA binding protein	AK300717|RDBP|7936|RD RNA binding protein	AK300898|RDBP|7936|RD RNA binding protein	AK303152|RDBP|7936|RD RNA binding protein	L03411|RDBP|7936|RD RNA binding protein	NM_002904|RDBP|7936|RD RNA binding protein
hg18_v1_chr11_+_35116961_35116992	0.0381026	AAGUGCU	AL832642|CD44|960|CD44 molecule (Indian blood group)	NM_000610|CD44|960|CD44 molecule (Indian blood group)	NM_001001389|CD44|960|CD44 molecule (Indian blood group)	NM_001001390|CD44|960|CD44 molecule (Indian blood group)	NM_001001391|CD44|960|CD44 molecule (Indian blood group)	NM_001001392|CD44|960|CD44 molecule (Indian blood group)
hg18_v1_chr2_+_190710730_190710730	0.0379675	AAGUGCU	NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr10_+_104603956_104604026	0.0375733	AAGUGCU	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT read-through transcript	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg18_v1_chr1_-_53566331_53566408	0.0372746	AAGUGCU	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr12_+_43972732_43972732	0.0371257	AAGUGCU	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg18_v1_chr16_+_9093035_9093048	0.0371248	AAGUGCU	NM_014117|C16orf72|29035|chromosome 16 open reading frame 72
hg18_v1_chr11_-_62231636_62231775	0.0359882	AAGUGCU	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr5_+_140207540_140207540	0.0359234	AAGUGCU	AB002343|PCDHA9|9752|protocadherin alpha 9	NM_014005|PCDHA9|9752|protocadherin alpha 9	NM_031857|PCDHA9|9752|protocadherin alpha 9
hg18_v1_chr11_-_67737275_67737836	0.0355225	AAGUGCU	AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	CR590861|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	CR598995|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg18_v1_chr12_+_119368561_119368645	0.0353204	AAGUGCU	NM_176818|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)	AK094319|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)
hg18_v1_chr17_+_7549138_7549271	0.03484	AAGUGCU	AK314841|EFNB3|1949|ephrin-B3	BC042944|EFNB3|1949|ephrin-B3	NM_001406|EFNB3|1949|ephrin-B3	U57001|EFNB3|1949|ephrin-B3	AK027329|EFNB3|1949|ephrin-B3
hg18_v1_chr17_-_38150551_38150658	0.0346894	AAGUGCU	BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)
hg18_v1_chr13_+_114065142_114065290	0.0334928	AAGUGCU	AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	CR602718|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg18_v1_chr10_+_11087259_11087268	0.0332093	AAGUGCU	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr6_-_30692995_30693001	0.0331726	AAGUGCU	AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	AK307406|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10
hg18_v1_chr9_+_107464558_107464598	0.0329932	AAGUGCU	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2	NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2	BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2
hg18_v1_chr13_+_110604039_110604065	0.0328866	AAGUGCU	AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr21_-_26465005_26465009	0.0327639	AAGUGCU	NM_000484|APP|351|amyloid beta (A4) precursor protein	NM_001136129|APP|351|amyloid beta (A4) precursor protein	NM_001136130|APP|351|amyloid beta (A4) precursor protein	NM_201413|APP|351|amyloid beta (A4) precursor protein	NM_201414|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chr15_-_63597073_63597136	0.0323662	AAGUGCU	AF221634|DPP8|54878|dipeptidyl-peptidase 8	AK291057|DPP8|54878|dipeptidyl-peptidase 8	NM_017743|DPP8|54878|dipeptidyl-peptidase 8	NM_130434|DPP8|54878|dipeptidyl-peptidase 8	NM_197961|DPP8|54878|dipeptidyl-peptidase 8	BC030688|DPP8|54878|dipeptidyl-peptidase 8
hg18_v1_chr17_+_18027538_18027591	0.0322801	AAGUGCU	NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)
hg18_v1_chr3_-_53891239_53891268	0.0318988	AAGUGCU	NM_022899|ACTR8|93973|ARP8 actin-related protein 8 homolog (yeast)
hg18_v1_chr9_-_36390212_36390295	0.0314221	AAGUGCU	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chrX_+_16647582_16647643	0.0311248	AAGUGCU	NM_032796|SYAP1|94056|synapse associated protein 1	CR749849|SYAP1|94056|synapse associated protein 1
hg18_v1_chr17_-_1306160_1306324	0.0310825	AAGUGCU	BT007277|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	DQ891147|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	DQ894327|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	CR600568|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	D10656|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	BC001718|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	BC009837|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK291060|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	BC008506|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	NM_005206|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	NM_016823|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)
hg18_v1_chr15_+_42368162_42368220	0.0310505	AAGUGCU	BC012124|CASC4|113201|cancer susceptibility candidate 4	NM_138423|CASC4|113201|cancer susceptibility candidate 4	NM_177974|CASC4|113201|cancer susceptibility candidate 4
hg18_v1_chr14_+_34583863_34583863	0.030758	AAGUGCU	NM_001079519|FAM177A1|283635|family with sequence similarity 177, member A1
hg18_v1_chrX_+_37524190_37524238	0.0303248	AAGUGCU	NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide	AK289753|CYBB|1536|cytochrome b-245, beta polypeptide	BC032720|CYBB|1536|cytochrome b-245, beta polypeptide
hg18_v1_chr7_+_99974720_99974774	0.0302865	AAGUGCU	NM_006076|AGFG2|3268|ArfGAP with FG repeats 2	BC009393|AGFG2|3268|ArfGAP with FG repeats 2
hg18_v1_chr7_-_112366962_112367170	0.030281	AAGUGCU	AL834437|C7orf60|154743|chromosome 7 open reading frame 60	AK299901|C7orf60|154743|chromosome 7 open reading frame 60	BC114615|C7orf60|154743|chromosome 7 open reading frame 60	AK056380|C7orf60|154743|chromosome 7 open reading frame 60	NM_152556|C7orf60|154743|chromosome 7 open reading frame 60
hg18_v1_chr21_-_42219849_42219867	0.0299333	AAGUGCU	BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2	AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2	NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2
hg18_v1_chr15_+_73922676_73922704	0.0298512	AAGUGCU	NM_173469|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2	AK000617|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2
hg18_v1_chr12_-_116890410_116890410	0.0293735	AAGUGCU	NM_173598|KSR2|283455|kinase suppressor of ras 2
hg18_v1_chr3_+_85858321_85858321	0.0286476	AAGUGCU	AF538973|CADM2|253559|cell adhesion molecule 2	NM_153184|CADM2|253559|cell adhesion molecule 2
hg18_v1_chr19_-_36531958_36532416	0.0283245	AAGUGCU	AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3	AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3	AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3	BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3	NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3
hg18_v1_chr5_+_140160966_140160966	0.0281002	AAGUGCU	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg18_v1_chr5_+_153550463_153550639	0.0279658	AAGUGCU	BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)
hg18_v1_chr3_+_20056527_20056527	0.0277876	AAGUGCU	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr12_+_4569504_4569527	0.0277334	AAGUGCU	AK292322|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4	BC031244|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4	NM_003845|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
hg18_v1_chr5_+_172415891_172416089	0.0276978	AAGUGCU	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg18_v1_chr6_-_159386007_159386171	0.0274024	AAGUGCU	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr20_-_31737815_31737902	0.0271941	AAGUGCU	CR594055|E2F1|1869|E2F transcription factor 1	S49592|E2F1|1869|E2F transcription factor 1	M96577|E2F1|1869|E2F transcription factor 1	BC050369|E2F1|1869|E2F transcription factor 1	NM_005225|E2F1|1869|E2F transcription factor 1
hg18_v1_chr17_+_71292275_71292275	0.0270033	AAGUGCU	NM_001080419|UNK|85451|unkempt homolog (Drosophila)
hg18_v1_chr20_-_391172_391258	0.0264958	AAGUGCU	AK095110|TBC1D20|128637|TBC1 domain family, member 20	NM_144628|TBC1D20|128637|TBC1 domain family, member 20	AK127062|TBC1D20|128637|TBC1 domain family, member 20
hg18_v1_chr5_+_149131695_149131695	0.0264634	AAGUGCU	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg18_v1_chr12_-_93991235_93991624	0.0264078	AAGUGCU	M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	CR590188|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1
hg18_v1_chr3_+_157874898_157874898	0.0263321	AAGUGCU	NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr9_+_6403139_6403150	0.025893	AAGUGCU	BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2
hg18_v1_chr2_-_127817143_127817274	0.0258393	AAGUGCU	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2
hg18_v1_chr2_+_85213884_85214457	0.0254752	AAGUGCU	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg18_v1_chr13_-_26232777_26232929	0.0250143	AAGUGCU	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg18_v1_chr3_+_23961739_23961899	0.0249743	AAGUGCU	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr10_+_25504295_25504295	0.0237736	AAGUGCU	AY528411|GPR158|57512|G protein-coupled receptor 158	NM_020752|GPR158|57512|G protein-coupled receptor 158
hg18_v1_chr3_+_10181562_10181638	0.0237537	AAGUGCU	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2	BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2	AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2	AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2	AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2	AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2
hg18_v1_chr7_+_17304707_17304882	0.0237179	AAGUGCU	AK307495|AHR|196|aryl hydrocarbon receptor	NM_001621|AHR|196|aryl hydrocarbon receptor	D16354|AHR|196|aryl hydrocarbon receptor	BC070080|AHR|196|aryl hydrocarbon receptor
hg18_v1_chr15_-_91417895_91417942	0.0231654	AAGUGCU	AK309814|RGMA|56963|RGM domain family, member A	AK125204|RGMA|56963|RGM domain family, member A	NM_001166288|RGMA|56963|RGM domain family, member A	NM_001166289|RGMA|56963|RGM domain family, member A
hg18_v1_chr14_-_59167193_59167272	0.0230948	AAGUGCU	CR612754|RTN1|6252|reticulon 1	CR607343|RTN1|6252|reticulon 1	CR626841|RTN1|6252|reticulon 1	CR603795|RTN1|6252|reticulon 1	CR606583|RTN1|6252|reticulon 1	CR596361|RTN1|6252|reticulon 1	CR600625|RTN1|6252|reticulon 1	CR601949|RTN1|6252|reticulon 1	CR622105|RTN1|6252|reticulon 1	CR623614|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg18_v1_chr9_-_135847106_135847429	0.0230219	AAGUGCU	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor	S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor	BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor	NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor
hg18_v1_chr12_-_43556899_43556899	0.0228696	AAGUGCU	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr6_+_110406890_110406990	0.0228046	AAGUGCU	BC126301|GPR6|2830|G protein-coupled receptor 6	BC117298|GPR6|2830|G protein-coupled receptor 6	BC043414|GPR6|2830|G protein-coupled receptor 6	NM_005284|GPR6|2830|G protein-coupled receptor 6
hg18_v1_chr14_-_80475636_80475636	0.0226167	AAGUGCU	NM_152446|C14orf145|145508|chromosome 14 open reading frame 145
hg18_v1_chr6_-_3401733_3401791	0.0225542	AAGUGCU	BC040876|SLC22A23|63027|solute carrier family 22, member 23	NM_015482|SLC22A23|63027|solute carrier family 22, member 23
hg18_v1_chr1_-_154147787_154147829	0.0224552	AAGUGCU	AK314239|RIT1|6016|Ras-like without CAAX 1	NM_006912|RIT1|6016|Ras-like without CAAX 1	AK298768|RIT1|6016|Ras-like without CAAX 1
hg18_v1_chr5_+_357290_357290	0.0219899	AAGUGCU	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor	BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor	BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor	EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor	NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor
hg18_v1_chr17_-_16038607_16038680	0.0219289	AAGUGCU	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr13_+_38510440_38510631	0.0217363	AAGUGCU	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	CR613108|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3	CR601315|NHLRC3|387921|NHL repeat containing 3
hg18_v1_chr16_+_87047418_87047514	0.0216002	AAGUGCU	NM_153813|ZFPM1|161882|zinc finger protein, multitype 1
hg18_v1_chr11_+_35640918_35640981	0.021299	AAGUGCU	BC013166|TRIM44|54765|tripartite motif containing 44	NM_017583|TRIM44|54765|tripartite motif containing 44
hg18_v1_chr19_-_12706528_12706557	0.0206828	AAGUGCU	BC000216|C19orf43|79002|chromosome 19 open reading frame 43	NM_024038|C19orf43|79002|chromosome 19 open reading frame 43	CR591036|C19orf43|79002|chromosome 19 open reading frame 43	BC040846|C19orf43|79002|chromosome 19 open reading frame 43
hg18_v1_chr18_-_50004996_50005155	0.0203367	AAGUGCU	AF072242|MBD2|8932|methyl-CpG binding domain protein 2	NM_003927|MBD2|8932|methyl-CpG binding domain protein 2	NM_015832|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr9_-_99994704_99994804	0.0198867	AAGUGCU	AK292788|CORO2A|7464|coronin, actin binding protein, 2A	BC011690|CORO2A|7464|coronin, actin binding protein, 2A	AB209809|CORO2A|7464|coronin, actin binding protein, 2A	NM_052820|CORO2A|7464|coronin, actin binding protein, 2A
hg18_v1_chr17_-_37560541_37560569	0.0194852	AAGUGCU	BC114439|RAB5C|5878|RAB5C, member RAS oncogene family	CR607771|RAB5C|5878|RAB5C, member RAS oncogene family	BC106039|RAB5C|5878|RAB5C, member RAS oncogene family	NM_004583|RAB5C|5878|RAB5C, member RAS oncogene family	NM_201434|RAB5C|5878|RAB5C, member RAS oncogene family	CR620573|RAB5C|5878|RAB5C, member RAS oncogene family
hg18_v1_chr5_-_1935764_1935879	0.0194631	AAGUGCU	BC110912|IRX4|50805|iroquois homeobox 4	BC144204|IRX4|50805|iroquois homeobox 4	BC136505|IRX4|50805|iroquois homeobox 4	BC136506|IRX4|50805|iroquois homeobox 4	AF124733|IRX4|50805|iroquois homeobox 4	NM_016358|IRX4|50805|iroquois homeobox 4
hg18_v1_chr4_-_185632610_185632740	0.0194174	AAGUGCU	X15949|IRF2|3660|interferon regulatory factor 2	AK312953|IRF2|3660|interferon regulatory factor 2	NM_002199|IRF2|3660|interferon regulatory factor 2
hg18_v1_chr12_+_63504618_63504683	0.0194025	AAGUGCU	NM_015279|TBC1D30|23329|TBC1 domain family, member 30	AK055404|TBC1D30|23329|TBC1 domain family, member 30
hg18_v1_chr7_-_20223467_20223544	0.0193988	AAGUGCU	BC137090|MACC1|346389|metastasis associated in colon cancer 1	BC144470|MACC1|346389|metastasis associated in colon cancer 1	AK131400|MACC1|346389|metastasis associated in colon cancer 1	NM_182762|MACC1|346389|metastasis associated in colon cancer 1
hg18_v1_chr9_+_95832867_95833005	0.0193521	AAGUGCU	AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr10_-_38305458_38305608	0.0192097	AAGUGCU	AJ491696|ZNF25|219749|zinc finger protein 25	NM_145011|ZNF25|219749|zinc finger protein 25	AK122958|ZNF25|219749|zinc finger protein 25	BC036038|ZNF25|219749|zinc finger protein 25	AK056452|ZNF25|219749|zinc finger protein 25
hg18_v1_chr16_-_76026431_76026511	0.0189441	AAGUGCU	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg18_v1_chrX_-_24943985_24944004	0.0188712	AAGUGCU	NM_139058|ARX|170302|aristaless related homeobox
hg18_v1_chr16_-_51139214_51139214	0.0188182	AAGUGCU	AK299202|TOX3|27324|TOX high mobility group box family member 3	NM_001146188|TOX3|27324|TOX high mobility group box family member 3
hg18_v1_chr2_+_190723216_190723216	0.0187906	AAGUGCU	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr4_+_146238605_146238605	0.0181658	AAGUGCU	NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1	NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg18_v1_chr10_-_60792666_60792666	0.0181096	AAGUGCU	AK299924|FAM13C|220965|family with sequence similarity 13, member C	NM_001143773|FAM13C|220965|family with sequence similarity 13, member C
hg18_v1_chr5_+_140227951_140228014	0.0180807	AAGUGCU	BC136706|PCDHA11|56138|protocadherin alpha 11	AJ007609|PCDHA11|56138|protocadherin alpha 11	NM_018902|PCDHA11|56138|protocadherin alpha 11	NM_031861|PCDHA11|56138|protocadherin alpha 11
hg18_v1_chr1_-_20985747_20985771	0.0180734	AAGUGCU	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg18_v1_chr20_+_43952997_43952997	0.0179927	AAGUGCU	NM_000308|CTSA|5476|cathepsin A	NM_001127695|CTSA|5476|cathepsin A	NM_001167594|CTSA|5476|cathepsin A
hg18_v1_chr4_+_154345039_154345071	0.0175229	AAGUGCU	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr1_-_148249152_148249340	0.0174917	AAGUGCU	AJ293573|OTUD7B|56957|OTU domain containing 7B	BC072681|OTUD7B|56957|OTU domain containing 7B	BC020622|OTUD7B|56957|OTU domain containing 7B	AK299790|OTUD7B|56957|OTU domain containing 7B	NM_020205|OTUD7B|56957|OTU domain containing 7B
hg18_v1_chr17_+_4683280_4683546	0.0169241	AAGUGCU	NM_001024937|MINK1|50488|misshapen-like kinase 1	NM_015716|MINK1|50488|misshapen-like kinase 1	NM_153827|MINK1|50488|misshapen-like kinase 1	NM_170663|MINK1|50488|misshapen-like kinase 1	BC034673|MINK1|50488|misshapen-like kinase 1	AB209450|MINK1|50488|misshapen-like kinase 1	AB041926|MINK1|50488|misshapen-like kinase 1	BC094686|MINK1|50488|misshapen-like kinase 1	DQ891158|MINK1|50488|misshapen-like kinase 1	DQ894339|MINK1|50488|misshapen-like kinase 1	AB035698|MINK1|50488|misshapen-like kinase 1	AY775058|MINK1|50488|misshapen-like kinase 1
hg18_v1_chr10_+_1092741_1092797	0.0164487	AAGUGCU	NM_014023|WDR37|22884|WD repeat domain 37	AK307259|WDR37|22884|WD repeat domain 37	AL136827|WDR37|22884|WD repeat domain 37
hg18_v1_chr12_-_104002348_104002542	0.0162911	AAGUGCU	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg18_v1_chr11_-_129377929_129377960	0.0159482	AAGUGCU	BC112934|PRDM10|56980|PR domain containing 10	AL833172|PRDM10|56980|PR domain containing 10	BX648944|PRDM10|56980|PR domain containing 10	NM_020228|PRDM10|56980|PR domain containing 10	NM_199437|PRDM10|56980|PR domain containing 10
hg18_v1_chr2_+_208102860_208102916	0.0158808	AAGUGCU	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	CR621261|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr1_-_23568854_23568945	0.0157806	AAGUGCU	NM_001077195|ZNF436|80818|zinc finger protein 436
hg18_v1_chr7_-_2320576_2320624	0.0157731	AAGUGCU	DQ892508|SNX8|29886|sorting nexin 8	DQ895722|SNX8|29886|sorting nexin 8	AK074544|SNX8|29886|sorting nexin 8	AF121858|SNX8|29886|sorting nexin 8	AK315670|SNX8|29886|sorting nexin 8	BC021565|SNX8|29886|sorting nexin 8	NM_013321|SNX8|29886|sorting nexin 8
hg18_v1_chr12_+_43896034_43896069	0.0157565	AAGUGCU	AK126409|ANO6|196527|anoctamin 6	NM_001025356|ANO6|196527|anoctamin 6	NM_001142679|ANO6|196527|anoctamin 6	AK310641|ANO6|196527|anoctamin 6
hg18_v1_chr6_+_43845915_43846077	0.0156854	AAGUGCU	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr8_+_42871176_42871243	0.015519	AAGUGCU	BC048304|HOOK3|84376|hook homolog 3 (Drosophila)	NM_032410|HOOK3|84376|hook homolog 3 (Drosophila)
hg18_v1_chr22_+_18499354_18499512	0.0155112	AAGUGCU	AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8	BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8	NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8	NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8	AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8
hg18_v1_chr1_-_153798946_153799037	0.015482	AAGUGCU	AB037841|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)	AB209068|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)	NM_018489|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)
hg18_v1_chr5_-_88235624_88235677	0.0152719	AAGUGCU	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr2_-_24003403_24003497	0.0151375	AAGUGCU	BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B	NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B	BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B	AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B
hg18_v1_chr1_-_55453612_55453636	0.0151132	AAGUGCU	NM_015306|USP24|23358|ubiquitin specific peptidase 24
hg18_v1_chr11_-_77806500_77806549	0.0146643	AAGUGCU	NM_080491|GAB2|9846|GRB2-associated binding protein 2
hg18_v1_chr17_+_54997667_54997871	0.014479	AAGUGCU	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg18_v1_chr3_-_123716471_123716482	0.0144611	AAGUGCU	NM_002264|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)
hg18_v1_chr18_+_17575542_17575542	0.0136276	AAGUGCU	AY149908|MIB1|57534|mindbomb homolog 1 (Drosophila)	BC110581|MIB1|57534|mindbomb homolog 1 (Drosophila)	BC110582|MIB1|57534|mindbomb homolog 1 (Drosophila)	NM_020774|MIB1|57534|mindbomb homolog 1 (Drosophila)
hg18_v1_chr5_+_140154627_140154733	0.0124781	AAGUGCU	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg18_v1_chr16_+_4837912_4837912	0.0124374	AAGUGCU	BC013750|UBN1|29855|ubinuclein 1	NM_001079514|UBN1|29855|ubinuclein 1
hg18_v1_chr7_-_4867963_4868188	0.0123757	AAGUGCU	DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)	DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)	AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)	BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)	NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)	AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)
hg18_v1_chr2_-_169927258_169927393	0.012278	AAGUGCU	U33837|LRP2|4036|low density lipoprotein receptor-related protein 2	AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2	NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2
hg18_v1_chr5_-_150118747_150118849	0.012184	AAGUGCU	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg18_v1_chr1_-_23730298_23730299	0.0116791	AAGUGCU	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr17_+_7063873_7063966	0.0116617	AAGUGCU	AK097243|ACADVL|37|acyl-CoA dehydrogenase, very long chain	NM_000018|ACADVL|37|acyl-CoA dehydrogenase, very long chain	NM_001033859|ACADVL|37|acyl-CoA dehydrogenase, very long chain	AK293537|ACADVL|37|acyl-CoA dehydrogenase, very long chain	AK056956|ACADVL|37|acyl-CoA dehydrogenase, very long chain	AK302653|ACADVL|37|acyl-CoA dehydrogenase, very long chain	BC012912|ACADVL|37|acyl-CoA dehydrogenase, very long chain	BC000399|ACADVL|37|acyl-CoA dehydrogenase, very long chain	X86556|ACADVL|37|acyl-CoA dehydrogenase, very long chain	BC020218|ACADVL|37|acyl-CoA dehydrogenase, very long chain
hg18_v1_chr9_+_95253732_95254271	0.0114102	AAGUGCU	BC075701|FAM120A|23196|family with sequence similarity 120A	BC098584|FAM120A|23196|family with sequence similarity 120A	AF214737|FAM120A|23196|family with sequence similarity 120A	AF214738|FAM120A|23196|family with sequence similarity 120A	NM_014612|FAM120A|23196|family with sequence similarity 120A	BC111736|FAM120A|23196|family with sequence similarity 120A	D80005|FAM120A|23196|family with sequence similarity 120A
hg18_v1_chr1_-_53566171_53566330	0.0104542	AAGUGCU	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr1_+_42619014_42619126	0.0100042	AAGUGCU	NM_173642|RIMKLA|284716|ribosomal modification protein rimK-like family member A	BC039737|RIMKLA|284716|ribosomal modification protein rimK-like family member A
hg18_v1_chr17_-_44160953_44161118	0.00984008	AAGUGCU	BT007410|HOXB13|10481|homeobox B13	DQ893517|HOXB13|10481|homeobox B13	DQ896496|HOXB13|10481|homeobox B13	U57052|HOXB13|10481|homeobox B13	BC007092|HOXB13|10481|homeobox B13	BC070233|HOXB13|10481|homeobox B13	AK313266|HOXB13|10481|homeobox B13	AK225234|HOXB13|10481|homeobox B13	NM_006361|HOXB13|10481|homeobox B13	AY937237|HOXB13|10481|homeobox B13
hg18_v1_chr4_+_166348219_166348248	0.00951613	AAGUGCU	NM_007246|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BC022503|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg18_v1_chr9_-_27563841_27563841	0.00941195	AAGUGCU	AK057806|C9orf72|203228|chromosome 9 open reading frame 72	NM_145005|C9orf72|203228|chromosome 9 open reading frame 72
hg18_v1_chr5_-_107745697_107745697	0.00927558	AAGUGCU	BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17	NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17
hg18_v1_chr21_+_44109529_44109574	0.0090755	AAGUGCU	NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3
hg18_v1_chr20_+_30259235_30259357	0.00899217	AAGUGCU	AK291033|POFUT1|23509|protein O-fucosyltransferase 1	AF375884|POFUT1|23509|protein O-fucosyltransferase 1	AK300810|POFUT1|23509|protein O-fucosyltransferase 1	AK303068|POFUT1|23509|protein O-fucosyltransferase 1	BC000582|POFUT1|23509|protein O-fucosyltransferase 1	NM_015352|POFUT1|23509|protein O-fucosyltransferase 1	NM_172236|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr1_-_23567084_23567487	0.00898765	AAGUGCU	EU446536|ZNF436|80818|zinc finger protein 436	AK308173|ZNF436|80818|zinc finger protein 436	BC056400|ZNF436|80818|zinc finger protein 436	AK092364|ZNF436|80818|zinc finger protein 436	AL834485|ZNF436|80818|zinc finger protein 436	NM_030634|ZNF436|80818|zinc finger protein 436
hg18_v1_chr7_-_126819953_126820036	0.00866768	AAGUGCU	AF218032|ZNF800|168850|zinc finger protein 800	NM_176814|ZNF800|168850|zinc finger protein 800	AK309674|ZNF800|168850|zinc finger protein 800	BC047641|ZNF800|168850|zinc finger protein 800
hg18_v1_chr6_-_52257500_52257576	0.00831658	AAGUGCU	D38073|MCM3|4172|minichromosome maintenance complex component 3	CR592122|MCM3|4172|minichromosome maintenance complex component 3	AK299566|MCM3|4172|minichromosome maintenance complex component 3	NM_002388|MCM3|4172|minichromosome maintenance complex component 3	AK301704|MCM3|4172|minichromosome maintenance complex component 3
hg18_v1_chr5_-_134942867_134942867	0.00831174	AAGUGCU	NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14
hg18_v1_chr17_-_42621663_42621704	0.00786557	AAGUGCU	NM_001114091|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	NM_001256|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)
hg18_v1_chr20_+_9443225_9443277	0.00771057	AAGUGCU	NM_012261|C20orf103|24141|chromosome 20 open reading frame 103
hg18_v1_chr17_+_6867090_6867112	0.00767555	AAGUGCU	BC059404|BCL6B|255877|B-cell CLL/lymphoma 6, member B	NM_181844|BCL6B|255877|B-cell CLL/lymphoma 6, member B	AK293102|BCL6B|255877|B-cell CLL/lymphoma 6, member B	AK292878|BCL6B|255877|B-cell CLL/lymphoma 6, member B	AB076580|BCL6B|255877|B-cell CLL/lymphoma 6, member B
hg18_v1_chr10_+_21863579_21863683	0.00750151	AAGUGCU	AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg18_v1_chr9_-_94472363_94472394	0.00737319	AAGUGCU	BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase	NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
hg18_v1_chr8_+_26296439_26296563	0.00708403	AAGUGCU	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624662|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR607895|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624736|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg18_v1_chr6_+_31604717_31604717	0.00678821	AAGUGCU	NM_001011700|MCCD1|401250|mitochondrial coiled-coil domain 1
hg18_v1_chr12_-_43556424_43556513	0.00647628	AAGUGCU	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr9_+_5500544_5500783	0.00570407	AAGUGCU	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2	NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2	AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2	EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2
hg18_v1_chr17_-_54587581_54587581	0.00563949	AAGUGCU	NM_001100595|SKA2|348235|spindle and kinetochore associated complex subunit 2	NM_182620|SKA2|348235|spindle and kinetochore associated complex subunit 2
hg18_v1_chr3_+_15222731_15222745	0.00549541	AAGUGCU	NM_014296|CAPN7|23473|calpain 7
hg18_v1_chr9_-_100057809_100057842	0.00489688	AAGUGCU	NM_018421|TBC1D2|55357|TBC1 domain family, member 2
hg18_v1_chr4_+_95592030_95592060	0.004892	AAGUGCU	AY345240|PDLIM5|10611|PDZ and LIM domain 5	NM_001011513|PDLIM5|10611|PDZ and LIM domain 5	NM_001011515|PDLIM5|10611|PDZ and LIM domain 5	NM_001011516|PDLIM5|10611|PDZ and LIM domain 5	NM_006457|PDLIM5|10611|PDZ and LIM domain 5
hg18_v1_chr5_+_173247919_173248049	0.0047076	AAGUGCU	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4
hg18_v1_chr2_+_10779191_10779261	0.00466586	AAGUGCU	NM_001039362|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2	NM_144583|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2	AK292952|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2
hg18_v1_chr14_+_57834962_57835027	0.00446664	AAGUGCU	NM_002892|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)	NM_023000|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)	NM_023001|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)	AK307520|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)	BC026230|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)
hg18_v1_chr11_-_118167108_118167181	0.00429829	AAGUGCU	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr2_+_69995656_69995739	0.00427838	AAGUGCU	BC098396|MXD1|4084|MAX dimerization protein 1	NM_002357|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr1_+_37930716_37930754	0.00371789	AAGUGCU	AK001330|CDCA8|55143|cell division cycle associated 8	AK222549|CDCA8|55143|cell division cycle associated 8	AY508815|CDCA8|55143|cell division cycle associated 8	CR617852|CDCA8|55143|cell division cycle associated 8	BC001651|CDCA8|55143|cell division cycle associated 8	NM_018101|CDCA8|55143|cell division cycle associated 8	AK022104|CDCA8|55143|cell division cycle associated 8
hg18_v1_chr12_-_75477692_75477786	0.00309586	AAGUGCU	AF323730|OSBPL8|114882|oxysterol binding protein-like 8	AF392452|OSBPL8|114882|oxysterol binding protein-like 8	NM_001003712|OSBPL8|114882|oxysterol binding protein-like 8	NM_020841|OSBPL8|114882|oxysterol binding protein-like 8
hg18_v1_chr5_+_140241976_140242037	0.00298068	AAGUGCU	AB208924|PCDHA13|56136|protocadherin alpha 13	AF152309|PCDHA13|56136|protocadherin alpha 13	AF152478|PCDHA13|56136|protocadherin alpha 13	NM_018904|PCDHA13|56136|protocadherin alpha 13	NM_031865|PCDHA13|56136|protocadherin alpha 13
hg18_v1_chr1_+_26728827_26728838	0.00268276	AAGUGCU	NM_002953|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1
hg18_v1_chr1_+_166172420_166172544	0.00261412	AAGUGCU	NM_001017977|DCAF6|55827|DDB1 and CUL4 associated factor 6	NM_001198956|DCAF6|55827|DDB1 and CUL4 associated factor 6	NM_001198957|DCAF6|55827|DDB1 and CUL4 associated factor 6	NM_018442|DCAF6|55827|DDB1 and CUL4 associated factor 6	AK093970|DCAF6|55827|DDB1 and CUL4 associated factor 6
hg18_v1_chr10_+_73645758_73645830	0.00247497	AAGUGCU	EU552924|ANAPC16|119504|anaphase promoting complex subunit 16	CR625345|ANAPC16|119504|anaphase promoting complex subunit 16	CR598398|ANAPC16|119504|anaphase promoting complex subunit 16	BC009530|ANAPC16|119504|anaphase promoting complex subunit 16	NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16	CR615306|ANAPC16|119504|anaphase promoting complex subunit 16
hg18_v1_chr10_+_70745615_70745615	0.00228385	AAGUGCU	NM_033496|HK1|3098|hexokinase 1
hg18_v1_chr20_+_1822779_1822813	0.00220827	AAGUGCU	NM_001040022|SIRPA|140885|signal-regulatory protein alpha
hg18_v1_chr14_+_20608179_20608370	0.0021656	AAGUGCU	BX248768|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40	BC144317|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40	AK074057|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40	BC142692|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40	BC151212|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40	AK126755|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40	NM_018071|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40
hg18_v1_chr11_-_102468113_102468153	0.00214171	AAGUGCU	AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
hg18_v1_chr15_+_70553719_70553724	0.00162697	AAGUGCU	AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg18_v1_chr4_-_176971175_176971175	0.0013592	AAGUGCU	BC032904|GPM6A|2823|glycoprotein M6A	NM_201591|GPM6A|2823|glycoprotein M6A
hg18_v1_chr17_-_15407497_15407669	0.00055189	AAGUGCU	BC011952|FAM18B2|201158|family with sequence similarity 18, member B2	AK303475|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 read-through transcript	AB074181|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 read-through transcript	AK310363|FAM18B2|201158|family with sequence similarity 18, member B2	NM_001135036|FAM18B2|201158|family with sequence similarity 18, member B2	NM_145301|FAM18B2|201158|family with sequence similarity 18, member B2
hg18_v1_chr6_-_38778900_38778931	0.00051809	AAGUGCU	NM_006708|GLO1|2739|glyoxalase I
hg18_v1_chr3_-_131095061_131095156	0.000206896	AAGUGCU	NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1
hg18_v1_chr11_+_66004454_66004478	6.51678e-05	AAGUGCU	AL833475|DPP3|10072|dipeptidyl-peptidase 3	NM_005700|DPP3|10072|dipeptidyl-peptidase 3	NM_130443|DPP3|10072|dipeptidyl-peptidase 3	BC007221|DPP3|10072|dipeptidyl-peptidase 3
