hg18_v1_chr17_-_40263704_40263706	3.48761	AAUACUG	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa	CR594677|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg18_v1_chr17_-_40263124_40263200	3.16525	AAUACUG	CR603321|GJC1|10052|gap junction protein, gamma 1, 45kDa	NM_005497|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg18_v1_chr7_-_28186867_28186995	3.034	AAUACUG	AK091311|JAZF1|221895|JAZF zinc finger 1	NM_175061|JAZF1|221895|JAZF zinc finger 1
hg18_v1_chr1_-_206484258_206484287	2.92597	AAUACUG	NM_025179|PLXNA2|5362|plexin A2
hg18_v1_chr17_+_52026058_52026079	2.74613	AAUACUG	AK314080|NOG|9241|noggin	NM_005450|NOG|9241|noggin
hg18_v1_chr2_-_151052391_151052429	2.40967	AAUACUG	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	CR626467|RND3|390|Rho family GTPase 3	CR607069|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg18_v1_chr5_-_112658456_112658560	2.33269	AAUACUG	BC009279|MCC|4163|mutated in colorectal cancers	BC018919|MCC|4163|mutated in colorectal cancers	NM_002387|MCC|4163|mutated in colorectal cancers	AK300259|MCC|4163|mutated in colorectal cancers
hg18_v1_chr22_-_34754343_34754628	2.3176	AAUACUG	AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr9_+_696744_696917	2.2796	AAUACUG	BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1	NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1
hg18_v1_chr11_-_46896484_46896792	2.14494	AAUACUG	AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4	BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4	BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4	AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4	NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4
hg18_v1_chr5_-_112852425_112852425	2.13049	AAUACUG	AK128596|MCC|4163|mutated in colorectal cancers	NM_001085377|MCC|4163|mutated in colorectal cancers
hg18_v1_chr3_-_135575925_135576186	2.08658	AAUACUG	AK223598|AMOTL2|51421|angiomotin like 2	AK001343|AMOTL2|51421|angiomotin like 2	AB023206|AMOTL2|51421|angiomotin like 2	AK291616|AMOTL2|51421|angiomotin like 2	NM_016201|AMOTL2|51421|angiomotin like 2
hg18_v1_chr19_+_15079141_15079242	2.02709	AAUACUG	AK123686|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)	NM_033025|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)	AK315453|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)	BC029926|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
hg18_v1_chr3_-_121652183_121652872	2.0042	AAUACUG	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg18_v1_chr1_-_8008979_8008992	1.93635	AAUACUG	NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1
hg18_v1_chr2_+_101680594_101680974	1.81623	AAUACUG	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr11_+_119701047_119701047	1.80724	AAUACUG	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg18_v1_chr1_+_176960896_176961097	1.7653	AAUACUG	BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2
hg18_v1_chr7_+_2524022_2524022	1.71407	AAUACUG	BC014851|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	NM_002304|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg18_v1_chr1_+_61320213_61321079	1.70154	AAUACUG	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg18_v1_chr2_-_164300758_164300768	1.69574	AAUACUG	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg18_v1_chr1_+_66772393_66772552	1.53418	AAUACUG	AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1
hg18_v1_chr12_+_8741746_8741997	1.52765	AAUACUG	AK302847|RIMKLB|57494|ribosomal modification protein rimK-like family member B	NM_020734|RIMKLB|57494|ribosomal modification protein rimK-like family member B	BC006368|RIMKLB|57494|ribosomal modification protein rimK-like family member B
hg18_v1_chr4_-_73653331_73653379	1.52692	AAUACUG	AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg18_v1_chr3_-_125085834_125085889	1.51442	AAUACUG	BC064695|MYLK|4638|myosin light chain kinase	NM_053025|MYLK|4638|myosin light chain kinase	NM_053026|MYLK|4638|myosin light chain kinase	NM_053027|MYLK|4638|myosin light chain kinase	NM_053028|MYLK|4638|myosin light chain kinase
hg18_v1_chr12_+_62524778_62524849	1.49827	AAUACUG	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr13_+_75232797_75232886	1.46642	AAUACUG	NM_015842|LMO7|4008|LIM domain 7	AK304051|LMO7|4008|LIM domain 7	AB020665|LMO7|4008|LIM domain 7
hg18_v1_chr14_-_34001164_34001312	1.45024	AAUACUG	CR616537|C14orf147|171546|chromosome 14 open reading frame 147	AK315409|C14orf147|171546|chromosome 14 open reading frame 147	AL080066|C14orf147|171546|chromosome 14 open reading frame 147	BC016805|C14orf147|171546|chromosome 14 open reading frame 147	BC016808|C14orf147|171546|chromosome 14 open reading frame 147	BC021701|C14orf147|171546|chromosome 14 open reading frame 147	AK001993|C14orf147|171546|chromosome 14 open reading frame 147	NM_138288|C14orf147|171546|chromosome 14 open reading frame 147	BC068480|C14orf147|171546|chromosome 14 open reading frame 147
hg18_v1_chr13_-_95094920_95094962	1.44116	AAUACUG	BC011450|DZIP1|22873|DAZ interacting protein 1	AB023213|DZIP1|22873|DAZ interacting protein 1	BC041804|DZIP1|22873|DAZ interacting protein 1	NM_014934|DZIP1|22873|DAZ interacting protein 1	NM_198968|DZIP1|22873|DAZ interacting protein 1
hg18_v1_chr10_-_61819493_61819493	1.44081	AAUACUG	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr12_+_92295738_92296308	1.43335	AAUACUG	NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1	AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1	BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1	AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg18_v1_chr1_+_61319976_61320121	1.43112	AAUACUG	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg18_v1_chr12_+_26003218_26003319	1.42406	AAUACUG	NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr14_-_88090641_88091251	1.37631	AAUACUG	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg18_v1_chr17_+_38576707_38576790	1.36355	AAUACUG	AK299328|NBR1|4077|neighbor of BRCA1 gene 1	AK290005|NBR1|4077|neighbor of BRCA1 gene 1	AK297425|NBR1|4077|neighbor of BRCA1 gene 1	X76952|NBR1|4077|neighbor of BRCA1 gene 1	NM_005899|NBR1|4077|neighbor of BRCA1 gene 1	BC009808|NBR1|4077|neighbor of BRCA1 gene 1	AY450308|NBR1|4077|neighbor of BRCA1 gene 1
hg18_v1_chr2_-_36678657_36678835	1.36264	AAUACUG	CR618629|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	CR620406|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	CR608599|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	CR589976|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	CR594110|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)
hg18_v1_chr9_+_131974506_131974763	1.36068	AAUACUG	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg18_v1_chr12_+_26017954_26017954	1.34606	AAUACUG	AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr2_+_205118710_205118760	1.34026	AAUACUG	AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)
hg18_v1_chrX_+_53095230_53095230	1.29737	AAUACUG	BC009861|GPR173|54328|G protein-coupled receptor 173	NM_018969|GPR173|54328|G protein-coupled receptor 173
hg18_v1_chr2_+_198377561_198377670	1.29272	AAUACUG	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg18_v1_chr2_-_9061193_9061352	1.28918	AAUACUG	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg18_v1_chr2_-_175255717_175256284	1.28814	AAUACUG	CR618785|WIPF1|7456|WAS/WASL interacting protein family, member 1	BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1	BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1	NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg18_v1_chr10_-_30388439_30388561	1.2652	AAUACUG	AK308850|KIAA1462|57608|KIAA1462	NM_020848|KIAA1462|57608|KIAA1462	BC071601|KIAA1462|57608|KIAA1462
hg18_v1_chr2_+_209996913_209997085	1.23328	AAUACUG	NM_001039538|MAP2|4133|microtubule-associated protein 2	BC038857|MAP2|4133|microtubule-associated protein 2	BC066648|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr5_-_137099602_137099718	1.22311	AAUACUG	BC034035|KLHL3|26249|kelch-like 3 (Drosophila)	NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)
hg18_v1_chr1_+_64709063_64709149	1.22225	AAUACUG	NM_020925|CACHD1|57685|cache domain containing 1
hg18_v1_chr12_-_105165805_105166150	1.21332	AAUACUG	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg18_v1_chr16_-_69030421_69030544	1.21089	AAUACUG	NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg18_v1_chr9_-_112840064_112840402	1.20497	AAUACUG	AK299279|LPAR1|1902|lysophosphatidic acid receptor 1	BC036034|LPAR1|1902|lysophosphatidic acid receptor 1	AK022808|LPAR1|1902|lysophosphatidic acid receptor 1	NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1	NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1
hg18_v1_chr16_-_48418418_48418418	1.18369	AAUACUG	NM_015069|ZNF423|23090|zinc finger protein 423
hg18_v1_chr7_-_6278662_6278851	1.17761	AAUACUG	DQ891736|CYTH3|9265|cytohesin 3	DQ894912|CYTH3|9265|cytohesin 3	EU176610|CYTH3|9265|cytohesin 3	AJ223957|CYTH3|9265|cytohesin 3	AJ005197|CYTH3|9265|cytohesin 3	NM_004227|CYTH3|9265|cytohesin 3	AK313728|CYTH3|9265|cytohesin 3	BC028717|CYTH3|9265|cytohesin 3
hg18_v1_chr12_-_26169074_26169303	1.17196	AAUACUG	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg18_v1_chr12_+_26096757_26096763	1.16915	AAUACUG	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr15_-_53822468_53822569	1.1623	AAUACUG	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr1_+_32777358_32777358	1.15779	AAUACUG	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr17_-_77474597_77474700	1.15351	AAUACUG	Y11514|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)	U84249|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)	BC012327|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)	NM_032711|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)
hg18_v1_chr11_+_117983515_117983660	1.14173	AAUACUG	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg18_v1_chr5_-_142795269_142795269	1.13382	AAUACUG	NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr1_-_212791597_212791646	1.12737	AAUACUG	NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14
hg18_v1_chr7_+_106472243_106472636	1.1122	AAUACUG	BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta
hg18_v1_chr1_-_72520735_72520864	1.10395	AAUACUG	AK295481|NEGR1|257194|neuronal growth regulator 1	BX538014|NEGR1|257194|neuronal growth regulator 1	AK092307|NEGR1|257194|neuronal growth regulator 1	NM_173808|NEGR1|257194|neuronal growth regulator 1
hg18_v1_chr1_+_61315516_61315533	1.10331	AAUACUG	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr8_-_95343716_95343740	1.09865	AAUACUG	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle	BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle	CR603445|GEM|2669|GTP binding protein overexpressed in skeletal muscle
hg18_v1_chr17_-_35337288_35337428	1.08775	AAUACUG	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	CR620858|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)
hg18_v1_chr2_-_202216451_202216470	1.08656	AAUACUG	CR608801|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	AK303954|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_001044385|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	AK304395|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr7_-_42243142_42243142	1.08034	AAUACUG	NM_000168|GLI3|2737|GLI family zinc finger 3
hg18_v1_chr4_-_140696740_140697026	1.07379	AAUACUG	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7	BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7	AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7	NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7
hg18_v1_chr14_-_67051773_67051954	1.0601	AAUACUG	NM_182526|TMEM229B|161145|transmembrane protein 229B	AK090706|TMEM229B|161145|transmembrane protein 229B
hg18_v1_chr12_+_970613_970814	1.05853	AAUACUG	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1
hg18_v1_chr13_-_39075355_39075369	1.05726	AAUACUG	NM_005780|LHFP|10186|lipoma HMGIC fusion partner
hg18_v1_chr16_-_86082818_86082965	1.05093	AAUACUG	AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14	NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14	AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14	BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14
hg18_v1_chr2_+_206255376_206255471	1.04533	AAUACUG	AK130198|NRP2|8828|neuropilin 2	AL833606|NRP2|8828|neuropilin 2	NM_003872|NRP2|8828|neuropilin 2	NM_018534|NRP2|8828|neuropilin 2	NM_201264|NRP2|8828|neuropilin 2	NM_201266|NRP2|8828|neuropilin 2	NM_201267|NRP2|8828|neuropilin 2	NM_201279|NRP2|8828|neuropilin 2	BX537423|NRP2|8828|neuropilin 2
hg18_v1_chr1_+_64983312_64983462	1.04515	AAUACUG	AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2	NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2
hg18_v1_chr6_+_106640881_106640897	1.03963	AAUACUG	AF084199|PRDM1|639|PR domain containing 1, with ZNF domain	AY198414|PRDM1|639|PR domain containing 1, with ZNF domain	NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain
hg18_v1_chr5_-_159672060_159672184	1.03712	AAUACUG	AK294000|CCNJL|79616|cyclin J-like	BC035871|CCNJL|79616|cyclin J-like	NM_024565|CCNJL|79616|cyclin J-like	AK302823|CCNJL|79616|cyclin J-like
hg18_v1_chr9_-_98421894_98421988	1.03642	AAUACUG	AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr6_-_24491498_24491498	1.01226	AAUACUG	BC050704|DCDC2|51473|doublecortin domain containing 2	NM_001195610|DCDC2|51473|doublecortin domain containing 2
hg18_v1_chr6_+_114285209_114285646	0.959558	AAUACUG	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg18_v1_chr8_+_70541412_70541426	0.952933	AAUACUG	AK095341|SULF1|23213|sulfatase 1	NM_001128204|SULF1|23213|sulfatase 1	NM_015170|SULF1|23213|sulfatase 1	AF545571|SULF1|23213|sulfatase 1
hg18_v1_chr2_+_210152609_210152669	0.94662	AAUACUG	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr13_-_105985313_105985337	0.946045	AAUACUG	BC069342|EFNB2|1948|ephrin-B2	BC074856|EFNB2|1948|ephrin-B2	BC074857|EFNB2|1948|ephrin-B2	U16797|EFNB2|1948|ephrin-B2	U81262|EFNB2|1948|ephrin-B2	BC105955|EFNB2|1948|ephrin-B2	BC105956|EFNB2|1948|ephrin-B2	BC105957|EFNB2|1948|ephrin-B2	L38734|EFNB2|1948|ephrin-B2	NM_004093|EFNB2|1948|ephrin-B2
hg18_v1_chr4_+_72271218_72271956	0.942184	AAUACUG	AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr8_+_1436938_1436975	0.938908	AAUACUG	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg18_v1_chr12_-_50871953_50872069	0.935837	AAUACUG	AJ717743|KRT80|144501|keratin 80	BC033114|KRT80|144501|keratin 80	BC065180|KRT80|144501|keratin 80	NM_001081492|KRT80|144501|keratin 80	NM_182507|KRT80|144501|keratin 80
hg18_v1_chr16_+_8675904_8676023	0.928678	AAUACUG	CR593324|ABAT|18|4-aminobutyrate aminotransferase	NM_020686|ABAT|18|4-aminobutyrate aminotransferase	BX537362|ABAT|18|4-aminobutyrate aminotransferase	AK096146|ABAT|18|4-aminobutyrate aminotransferase	BC031413|ABAT|18|4-aminobutyrate aminotransferase	BC015628|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr14_-_34253473_34253779	0.928242	AAUACUG	CR605888|CFL2|1073|cofilin 2 (muscle)	CR600914|CFL2|1073|cofilin 2 (muscle)	AF134803|CFL2|1073|cofilin 2 (muscle)	CR620328|CFL2|1073|cofilin 2 (muscle)	BC022364|CFL2|1073|cofilin 2 (muscle)	BC022876|CFL2|1073|cofilin 2 (muscle)	BC025683|CFL2|1073|cofilin 2 (muscle)	NM_138638|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr4_+_87734489_87734505	0.92703	AAUACUG	AK056151|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)	NM_006264|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)	NM_080683|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)	NM_080684|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)	NM_080685|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)	BC139915|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)	U12132|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg18_v1_chr4_+_141397889_141397889	0.920456	AAUACUG	AK027797|SCOC|60592|short coiled-coil protein	NM_032547|SCOC|60592|short coiled-coil protein
hg18_v1_chr20_+_61996954_61996982	0.916574	AAUACUG	CR595822|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5	BC053642|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5	NM_025219|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5
hg18_v1_chr8_+_32525269_32525393	0.914583	AAUACUG	AK298132|NRG1|3084|neuregulin 1	NM_001160002|NRG1|3084|neuregulin 1	NM_001160004|NRG1|3084|neuregulin 1	NM_001160005|NRG1|3084|neuregulin 1	NM_001160007|NRG1|3084|neuregulin 1	NM_001160008|NRG1|3084|neuregulin 1	NM_004495|NRG1|3084|neuregulin 1	NM_013956|NRG1|3084|neuregulin 1	NM_013957|NRG1|3084|neuregulin 1	NM_013958|NRG1|3084|neuregulin 1	NM_013960|NRG1|3084|neuregulin 1	NM_013964|NRG1|3084|neuregulin 1	M94168|NRG1|3084|neuregulin 1	BC006492|NRG1|3084|neuregulin 1	M94167|NRG1|3084|neuregulin 1	AF026146|NRG1|3084|neuregulin 1	AK097005|NRG1|3084|neuregulin 1	AK290730|NRG1|3084|neuregulin 1	L12261|NRG1|3084|neuregulin 1
hg18_v1_chr1_+_33494745_33494760	0.913701	AAUACUG	NM_152493|ZNF362|149076|zinc finger protein 362
hg18_v1_chr11_+_12652427_12652652	0.896618	AAUACUG	NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg18_v1_chr8_+_107351519_107351679	0.892446	AAUACUG	NM_001198533|OXR1|55074|oxidation resistance 1	NM_018002|OXR1|55074|oxidation resistance 1	AK124441|OXR1|55074|oxidation resistance 1	BC040619|LOC346887|346887|similar to solute carrier family 16 (monocarboxylic acid transporters), member 14
hg18_v1_chr18_+_54681040_54681159	0.890763	AAUACUG	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg18_v1_chr21_-_15358996_15359180	0.889767	AAUACUG	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg18_v1_chr8_+_12914143_12914143	0.878902	AAUACUG	AB040889|KIAA1456|57604|KIAA1456	NM_001099677|KIAA1456|57604|KIAA1456
hg18_v1_chr17_-_57497380_57497438	0.869964	AAUACUG	BC140891|MED13|9969|mediator complex subunit 13	AF117754|MED13|9969|mediator complex subunit 13	NM_005121|MED13|9969|mediator complex subunit 13
hg18_v1_chr16_+_84202515_84202529	0.867302	AAUACUG	BC037556|KIAA0182|23199|KIAA0182	NM_001134473|KIAA0182|23199|KIAA0182
hg18_v1_chr6_+_106653429_106653566	0.86572	AAUACUG	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain	AY198415|PRDM1|639|PR domain containing 1, with ZNF domain	NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain	BC103832|PRDM1|639|PR domain containing 1, with ZNF domain	BC103833|PRDM1|639|PR domain containing 1, with ZNF domain	BC103834|PRDM1|639|PR domain containing 1, with ZNF domain	BC103835|PRDM1|639|PR domain containing 1, with ZNF domain
hg18_v1_chr3_-_38666122_38666167	0.86447	AAUACUG	M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit	NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit	NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit	NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit	NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit	BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit	NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit	NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit
hg18_v1_chr15_-_54322767_54322782	0.856807	AAUACUG	NM_022841|RFX7|64864|regulatory factor X, 7
hg18_v1_chr2_-_166940710_166940742	0.82941	AAUACUG	AK307549|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit	NM_002977|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit
hg18_v1_chr12_-_15833617_15833776	0.829302	AAUACUG	AK304860|EPS8|2059|epidermal growth factor receptor pathway substrate 8	NM_004447|EPS8|2059|epidermal growth factor receptor pathway substrate 8
hg18_v1_chr2_-_144994349_144994434	0.827869	AAUACUG	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2	AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2
hg18_v1_chr17_-_34860840_34861054	0.820604	AAUACUG	BC131783|MED1|5469|mediator complex subunit 1	AF055994|MED1|5469|mediator complex subunit 1	CR625084|MED1|5469|mediator complex subunit 1	BC006517|MED1|5469|mediator complex subunit 1	Y13467|MED1|5469|mediator complex subunit 1	BC060758|MED1|5469|mediator complex subunit 1	AK299789|MED1|5469|mediator complex subunit 1	AK314185|MED1|5469|mediator complex subunit 1	NM_004774|MED1|5469|mediator complex subunit 1
hg18_v1_chr9_+_35479989_35480006	0.809618	AAUACUG	NM_014806|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr4_-_101330629_101330677	0.808437	AAUACUG	AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like	BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like	AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like	AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like	NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like
hg18_v1_chr6_-_17814596_17815167	0.804453	AAUACUG	Z25535|NUP153|9972|nucleoporin 153kDa	AK295644|NUP153|9972|nucleoporin 153kDa	BC052965|NUP153|9972|nucleoporin 153kDa	NM_005124|NUP153|9972|nucleoporin 153kDa	AB210024|NUP153|9972|nucleoporin 153kDa
hg18_v1_chr9_-_138560058_138560084	0.803091	AAUACUG	AF308602|NOTCH1|4851|notch 1	M73980|NOTCH1|4851|notch 1	NM_017617|NOTCH1|4851|notch 1
hg18_v1_chr20_+_45564007_45564052	0.801541	AAUACUG	NM_001174087|NCOA3|8202|nuclear receptor coactivator 3	NM_001174088|NCOA3|8202|nuclear receptor coactivator 3	NM_006534|NCOA3|8202|nuclear receptor coactivator 3	NM_181659|NCOA3|8202|nuclear receptor coactivator 3	BC092516|NCOA3|8202|nuclear receptor coactivator 3
hg18_v1_chr7_+_2525922_2526004	0.796498	AAUACUG	NM_001040167|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	NM_001040168|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg18_v1_chr6_-_119137923_119137930	0.796397	AAUACUG	BC110835|C6orf204|387119|chromosome 6 open reading frame 204	BC064835|C6orf204|387119|chromosome 6 open reading frame 204	NM_001178035|C6orf204|387119|chromosome 6 open reading frame 204
hg18_v1_chr16_-_22293097_22293496	0.795013	AAUACUG	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg18_v1_chr6_-_10527772_10527782	0.793184	AAUACUG	AK296737|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	NM_001042425|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg18_v1_chr16_+_88515917_88515917	0.790506	AAUACUG	AK292219|TUBB3|10381|tubulin, beta 3	NM_001197181|TUBB3|10381|tubulin, beta 3
hg18_v1_chr20_+_62266270_62266284	0.789559	AAUACUG	AB020642|MYT1|4661|myelin transcription factor 1	NM_004535|MYT1|4661|myelin transcription factor 1
hg18_v1_chr17_-_74990157_74990157	0.784319	AAUACUG	NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3
hg18_v1_chr1_+_181258952_181259302	0.770236	AAUACUG	BC067813|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	NM_002293|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	J03202|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)
hg18_v1_chr14_-_38971370_38971454	0.768266	AAUACUG	BC053537|FBXO33|254170|F-box protein 33	BC068566|FBXO33|254170|F-box protein 33	BC030611|FBXO33|254170|F-box protein 33	NM_203301|FBXO33|254170|F-box protein 33
hg18_v1_chr14_+_76297885_76298532	0.763444	AAUACUG	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg18_v1_chr14_+_51188289_51188472	0.756347	AAUACUG	BX161430|FRMD6|122786|FERM domain containing 6	NM_152330|FRMD6|122786|FERM domain containing 6	BC020521|FRMD6|122786|FERM domain containing 6	AK315764|FRMD6|122786|FERM domain containing 6	AK055545|FRMD6|122786|FERM domain containing 6	BX647863|FRMD6|122786|FERM domain containing 6
hg18_v1_chr7_-_139123906_139124843	0.74822	AAUACUG	AF208291|HIPK2|28996|homeodomain interacting protein kinase 2	AF326592|HIPK2|28996|homeodomain interacting protein kinase 2	NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2	NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2
hg18_v1_chr3_-_126576693_126576887	0.746402	AAUACUG	AF039019|ZNF148|7707|zinc finger protein 148	AL833616|ZNF148|7707|zinc finger protein 148	AF432210|ZNF148|7707|zinc finger protein 148	AJ236885|ZNF148|7707|zinc finger protein 148	L04282|ZNF148|7707|zinc finger protein 148	BC035591|ZNF148|7707|zinc finger protein 148	BC018971|ZNF148|7707|zinc finger protein 148	AK314203|ZNF148|7707|zinc finger protein 148	BC050260|ZNF148|7707|zinc finger protein 148	NM_021964|ZNF148|7707|zinc finger protein 148
hg18_v1_chr19_-_52308848_52308877	0.745559	AAUACUG	AB028987|ZC3H4|23211|zinc finger CCCH-type containing 4	NM_015168|ZC3H4|23211|zinc finger CCCH-type containing 4
hg18_v1_chr16_+_88517187_88517331	0.744518	AAUACUG	NM_006086|TUBB3|10381|tubulin, beta 3	CR598025|TUBB3|10381|tubulin, beta 3	CR601978|TUBB3|10381|tubulin, beta 3	AK314616|TUBB3|10381|tubulin, beta 3	AK058140|TUBB3|10381|tubulin, beta 3	AK223039|TUBB3|10381|tubulin, beta 3	AK307201|TUBB3|10381|tubulin, beta 3	CR591503|TUBB3|10381|tubulin, beta 3	CR590075|TUBB3|10381|tubulin, beta 3	CR592610|TUBB3|10381|tubulin, beta 3	CR595964|TUBB3|10381|tubulin, beta 3	CR598043|TUBB3|10381|tubulin, beta 3	CR600906|TUBB3|10381|tubulin, beta 3	CR614385|TUBB3|10381|tubulin, beta 3	BC000748|TUBB3|10381|tubulin, beta 3	BC003021|TUBB3|10381|tubulin, beta 3	CR590351|TUBB3|10381|tubulin, beta 3	CR592791|TUBB3|10381|tubulin, beta 3	CR597505|TUBB3|10381|tubulin, beta 3	CR599272|TUBB3|10381|tubulin, beta 3	CR604020|TUBB3|10381|tubulin, beta 3	CR604723|TUBB3|10381|tubulin, beta 3	CR605372|TUBB3|10381|tubulin, beta 3	CR607915|TUBB3|10381|tubulin, beta 3	CR611692|TUBB3|10381|tubulin, beta 3	CR612113|TUBB3|10381|tubulin, beta 3	CR618719|TUBB3|10381|tubulin, beta 3	CR619366|TUBB3|10381|tubulin, beta 3	CR619439|TUBB3|10381|tubulin, beta 3	CR621602|TUBB3|10381|tubulin, beta 3	CR592245|TUBB3|10381|tubulin, beta 3	CR594431|TUBB3|10381|tubulin, beta 3	CR601082|TUBB3|10381|tubulin, beta 3	CR601754|TUBB3|10381|tubulin, beta 3	CR605618|TUBB3|10381|tubulin, beta 3	CR607807|TUBB3|10381|tubulin, beta 3	CR613956|TUBB3|10381|tubulin, beta 3	CR614638|TUBB3|10381|tubulin, beta 3	CR615850|TUBB3|10381|tubulin, beta 3	CR617597|TUBB3|10381|tubulin, beta 3	CR618148|TUBB3|10381|tubulin, beta 3	CR620404|TUBB3|10381|tubulin, beta 3	CR622595|TUBB3|10381|tubulin, beta 3	CR622839|TUBB3|10381|tubulin, beta 3	CR625315|TUBB3|10381|tubulin, beta 3	CR595448|TUBB3|10381|tubulin, beta 3	CR609285|TUBB3|10381|tubulin, beta 3	CR623719|TUBB3|10381|tubulin, beta 3	CR594636|TUBB3|10381|tubulin, beta 3	CR603943|TUBB3|10381|tubulin, beta 3	CR604865|TUBB3|10381|tubulin, beta 3	CR605315|TUBB3|10381|tubulin, beta 3	CR608519|TUBB3|10381|tubulin, beta 3	CR609873|TUBB3|10381|tubulin, beta 3	CR609931|TUBB3|10381|tubulin, beta 3	CR610428|TUBB3|10381|tubulin, beta 3	CR610920|TUBB3|10381|tubulin, beta 3	CR613333|TUBB3|10381|tubulin, beta 3	CR615967|TUBB3|10381|tubulin, beta 3	CR617704|TUBB3|10381|tubulin, beta 3	CR625137|TUBB3|10381|tubulin, beta 3	CR590783|TUBB3|10381|tubulin, beta 3	CR596446|TUBB3|10381|tubulin, beta 3	CR604211|TUBB3|10381|tubulin, beta 3	CR604583|TUBB3|10381|tubulin, beta 3	CR605022|TUBB3|10381|tubulin, beta 3	CR613212|TUBB3|10381|tubulin, beta 3	CR615484|TUBB3|10381|tubulin, beta 3	CR615487|TUBB3|10381|tubulin, beta 3	CR616697|TUBB3|10381|tubulin, beta 3	CR624252|TUBB3|10381|tubulin, beta 3	CR624879|TUBB3|10381|tubulin, beta 3	CR625914|TUBB3|10381|tubulin, beta 3	CR593464|TUBB3|10381|tubulin, beta 3	CR600381|TUBB3|10381|tubulin, beta 3	CR601914|TUBB3|10381|tubulin, beta 3	CR605928|TUBB3|10381|tubulin, beta 3	CR609561|TUBB3|10381|tubulin, beta 3	CR590708|TUBB3|10381|tubulin, beta 3	CR596505|TUBB3|10381|tubulin, beta 3	CR598551|TUBB3|10381|tubulin, beta 3	CR600096|TUBB3|10381|tubulin, beta 3	CR604086|TUBB3|10381|tubulin, beta 3	CR605687|TUBB3|10381|tubulin, beta 3	CR611346|TUBB3|10381|tubulin, beta 3	CR614854|TUBB3|10381|tubulin, beta 3	CR615754|TUBB3|10381|tubulin, beta 3	CR623384|TUBB3|10381|tubulin, beta 3	CR594063|TUBB3|10381|tubulin, beta 3	CR596211|TUBB3|10381|tubulin, beta 3	CR596786|TUBB3|10381|tubulin, beta 3	CR599992|TUBB3|10381|tubulin, beta 3	CR603504|TUBB3|10381|tubulin, beta 3	CR603509|TUBB3|10381|tubulin, beta 3	CR603741|TUBB3|10381|tubulin, beta 3	CR614150|TUBB3|10381|tubulin, beta 3	CR623445|TUBB3|10381|tubulin, beta 3	CR592535|TUBB3|10381|tubulin, beta 3	CR609278|TUBB3|10381|tubulin, beta 3	CR610945|TUBB3|10381|tubulin, beta 3	CR623379|TUBB3|10381|tubulin, beta 3	CR609372|TUBB3|10381|tubulin, beta 3	CR622759|TUBB3|10381|tubulin, beta 3	BC064975|TUBB3|10381|tubulin, beta 3	CR624149|TUBB3|10381|tubulin, beta 3	CR593269|TUBB3|10381|tubulin, beta 3	CR600094|TUBB3|10381|tubulin, beta 3	CR612703|TUBB3|10381|tubulin, beta 3	AF427491|TUBB3|10381|tubulin, beta 3	U47634|TUBB3|10381|tubulin, beta 3	S62643|TUBB3|10381|tubulin, beta 3
hg18_v1_chr12_+_118590039_118590432	0.741283	AAUACUG	AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	CR596319|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit	AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit
hg18_v1_chr6_+_20510019_20510145	0.739866	AAUACUG	BC099908|E2F3|1871|E2F transcription factor 3	NM_001949|E2F3|1871|E2F transcription factor 3	CR597993|E2F3|1871|E2F transcription factor 3
hg18_v1_chr10_-_105604942_105605578	0.733796	AAUACUG	NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A
hg18_v1_chr1_+_199519202_199519319	0.724427	AAUACUG	NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
hg18_v1_chr14_+_51025604_51025604	0.716884	AAUACUG	AL833158|FRMD6|122786|FERM domain containing 6	NM_001042481|FRMD6|122786|FERM domain containing 6
hg18_v1_chr18_-_19420438_19420578	0.711145	AAUACUG	AK295715|NPC1|4864|Niemann-Pick disease, type C1	NM_000271|NPC1|4864|Niemann-Pick disease, type C1
hg18_v1_chr3_-_126257425_126257556	0.709729	AAUACUG	NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)
hg18_v1_chr20_-_23350038_23350155	0.70287	AAUACUG	EU832496|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	EU832577|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	BC008463|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	AK294703|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	BC060840|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	AK124876|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	BC047426|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	AK307709|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	BC026310|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	AK296385|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	BX648330|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	AK295791|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta	NM_022080|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta
hg18_v1_chr17_-_74433048_74433096	0.699825	AAUACUG	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr14_-_34252695_34252784	0.698664	AAUACUG	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr17_+_24742068_24742074	0.695567	AAUACUG	NM_020791|TAOK1|57551|TAO kinase 1	BC133039|TAOK1|57551|TAO kinase 1	BC144067|TAOK1|57551|TAO kinase 1
hg18_v1_chr5_-_121440704_121440816	0.695024	AAUACUG	AK316309|LOX|4015|lysyl oxidase	AK307732|LOX|4015|lysyl oxidase	NM_001178102|LOX|4015|lysyl oxidase
hg18_v1_chr7_+_101247601_101247601	0.694325	AAUACUG	M74099|CUX1|1523|cut-like homeobox 1	NM_181552|CUX1|1523|cut-like homeobox 1
hg18_v1_chr7_-_134845363_134845437	0.693493	AAUACUG	BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4	NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4
hg18_v1_chr9_+_36026900_36026994	0.691481	AAUACUG	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	CR593801|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg18_v1_chr9_-_109291866_109291869	0.690123	AAUACUG	NM_004235|KLF4|9314|Kruppel-like factor 4 (gut)
hg18_v1_chr8_+_70567581_70567605	0.68244	AAUACUG	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr3_-_187309442_187309658	0.680534	AAUACUG	BC007333|ETV5|2119|ets variant 5	NM_004454|ETV5|2119|ets variant 5
hg18_v1_chr20_+_57729659_57729659	0.679074	AAUACUG	AB098521|PHACTR3|116154|phosphatase and actin regulator 3	AB098522|PHACTR3|116154|phosphatase and actin regulator 3	NM_183244|PHACTR3|116154|phosphatase and actin regulator 3	NM_183246|PHACTR3|116154|phosphatase and actin regulator 3
hg18_v1_chr3_-_162305319_162305944	0.678886	AAUACUG	AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg18_v1_chr11_-_65871592_65871742	0.678266	AAUACUG	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR623114|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR591559|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR617432|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg18_v1_chr20_-_60074237_60074311	0.660218	AAUACUG	U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa	NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa	Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg18_v1_chr18_-_51406841_51406859	0.651833	AAUACUG	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chr2_+_178767317_178767623	0.645486	AAUACUG	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr1_-_95165089_95165368	0.643676	AAUACUG	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	CR622382|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg18_v1_chr20_-_48163071_48163123	0.642768	AAUACUG	BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR604443|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR624783|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR615402|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1
hg18_v1_chr16_+_48616593_48616690	0.641821	AAUACUG	AK095420|TMEM188|255919|transmembrane protein 188	AK301610|TMEM188|255919|transmembrane protein 188	BC022550|TMEM188|255919|transmembrane protein 188	CR933600|TMEM188|255919|transmembrane protein 188	AK307309|TMEM188|255919|transmembrane protein 188	BC036683|TMEM188|255919|transmembrane protein 188	FJ516381|TMEM188|255919|transmembrane protein 188	NM_153261|TMEM188|255919|transmembrane protein 188
hg18_v1_chr12_+_54612055_54612174	0.640703	AAUACUG	NM_201444|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_201445|DGKA|1606|diacylglycerol kinase, alpha 80kDa	NM_201554|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AK309939|DGKA|1606|diacylglycerol kinase, alpha 80kDa	AY930112|DGKA|1606|diacylglycerol kinase, alpha 80kDa	BC031870|DGKA|1606|diacylglycerol kinase, alpha 80kDa	BC023523|DGKA|1606|diacylglycerol kinase, alpha 80kDa
hg18_v1_chr21_-_14677310_14677379	0.635928	AAUACUG	CR603870|HSPA13|6782|heat shock protein 70kDa family, member 13	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13	AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13	AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13	AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13	BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13	U04735|HSPA13|6782|heat shock protein 70kDa family, member 13	NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13
hg18_v1_chr14_+_70443864_70443908	0.632467	AAUACUG	AB023212|PCNX|22990|pecanex homolog (Drosophila)	AF233450|PCNX|22990|pecanex homolog (Drosophila)	BC152474|PCNX|22990|pecanex homolog (Drosophila)	BC167161|PCNX|22990|pecanex homolog (Drosophila)	NM_014982|PCNX|22990|pecanex homolog (Drosophila)
hg18_v1_chr7_+_28305464_28305464	0.631141	AAUACUG	L05913|CREB5|9586|cAMP responsive element binding protein 5	NM_182899|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr7_-_11838260_11838369	0.627939	AAUACUG	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr17_-_46553083_46553226	0.624588	AAUACUG	AF327452|SPAG9|9043|sperm associated antigen 9	BC106048|SPAG9|9043|sperm associated antigen 9	AK302789|SPAG9|9043|sperm associated antigen 9	AY850123|SPAG9|9043|sperm associated antigen 9	AB011088|SPAG9|9043|sperm associated antigen 9	BC146755|SPAG9|9043|sperm associated antigen 9	BC153878|SPAG9|9043|sperm associated antigen 9	AK091921|SPAG9|9043|sperm associated antigen 9	NM_001130528|SPAG9|9043|sperm associated antigen 9	NM_003971|SPAG9|9043|sperm associated antigen 9
hg18_v1_chr6_-_154873396_154873458	0.620194	AAUACUG	AY328891|CNKSR3|154043|CNKSR family member 3	AY328892|CNKSR3|154043|CNKSR family member 3	AY328893|CNKSR3|154043|CNKSR family member 3	NM_173515|CNKSR3|154043|CNKSR family member 3
hg18_v1_chr8_-_82186832_82186907	0.616178	AAUACUG	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1
hg18_v1_chr3_-_15875932_15876100	0.615726	AAUACUG	AB002377|ANKRD28|23243|ankyrin repeat domain 28	NM_015199|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr8_-_49996353_49996544	0.613063	AAUACUG	CR605323|SNAI2|6591|snail homolog 2 (Drosophila)	EU446862|SNAI2|6591|snail homolog 2 (Drosophila)	CR610096|SNAI2|6591|snail homolog 2 (Drosophila)	BC015895|SNAI2|6591|snail homolog 2 (Drosophila)	CR608999|SNAI2|6591|snail homolog 2 (Drosophila)	CR616026|SNAI2|6591|snail homolog 2 (Drosophila)	BC014890|SNAI2|6591|snail homolog 2 (Drosophila)	CR611662|SNAI2|6591|snail homolog 2 (Drosophila)	AK223368|SNAI2|6591|snail homolog 2 (Drosophila)	AK312661|SNAI2|6591|snail homolog 2 (Drosophila)	NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)
hg18_v1_chr10_-_61570665_61570779	0.610992	AAUACUG	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr1_+_23990228_23990297	0.60772	AAUACUG	CR597442|LYPLA2|11313|lysophospholipase II	CR607318|LYPLA2|11313|lysophospholipase II	CR614223|LYPLA2|11313|lysophospholipase II	AF098668|LYPLA2|11313|lysophospholipase II	NM_007260|LYPLA2|11313|lysophospholipase II	CR590473|LYPLA2|11313|lysophospholipase II	CR595388|LYPLA2|11313|lysophospholipase II	CR621740|LYPLA2|11313|lysophospholipase II	CR606705|LYPLA2|11313|lysophospholipase II	CR601116|LYPLA2|11313|lysophospholipase II	CR593399|LYPLA2|11313|lysophospholipase II	CR605682|LYPLA2|11313|lysophospholipase II	CR609115|LYPLA2|11313|lysophospholipase II	BC017034|LYPLA2|11313|lysophospholipase II	CR614434|LYPLA2|11313|lysophospholipase II	CR624649|LYPLA2|11313|lysophospholipase II	BC017193|LYPLA2|11313|lysophospholipase II	CR623546|LYPLA2|11313|lysophospholipase II
hg18_v1_chr6_-_24827265_24827381	0.599757	AAUACUG	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg18_v1_chr13_+_92677012_92677845	0.598478	AAUACUG	NM_005708|GPC6|10082|glypican 6	AF105267|GPC6|10082|glypican 6	AY358462|GPC6|10082|glypican 6	BC106947|GPC6|10082|glypican 6	AK304338|GPC6|10082|glypican 6	AK130013|GPC6|10082|glypican 6	AK290144|GPC6|10082|glypican 6	AK074741|GPC6|10082|glypican 6
hg18_v1_chr5_-_14924555_14925155	0.597076	AAUACUG	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)	DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)	AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)	AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)	BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)	AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)	AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)	AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)	BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)	NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)
hg18_v1_chr2_-_216009015_216009040	0.595153	AAUACUG	BC117176|FN1|2335|fibronectin 1	BC143754|FN1|2335|fibronectin 1	BC143763|FN1|2335|fibronectin 1	AB209840|FN1|2335|fibronectin 1	CR749316|FN1|2335|fibronectin 1	CR749317|FN1|2335|fibronectin 1	AB191261|FN1|2335|fibronectin 1	AL832202|FN1|2335|fibronectin 1	AL832771|FN1|2335|fibronectin 1	BC078656|FN1|2335|fibronectin 1	BC100030|FN1|2335|fibronectin 1	BX537590|FN1|2335|fibronectin 1	BX538017|FN1|2335|fibronectin 1	BX538018|FN1|2335|fibronectin 1	BX640608|FN1|2335|fibronectin 1	BX640731|FN1|2335|fibronectin 1	BX640802|FN1|2335|fibronectin 1	BX640803|FN1|2335|fibronectin 1	BX640875|FN1|2335|fibronectin 1	BX640999|FN1|2335|fibronectin 1	BX649182|FN1|2335|fibronectin 1	NM_002026|FN1|2335|fibronectin 1	NM_054034|FN1|2335|fibronectin 1	NM_212474|FN1|2335|fibronectin 1	NM_212476|FN1|2335|fibronectin 1	NM_212478|FN1|2335|fibronectin 1	NM_212482|FN1|2335|fibronectin 1
hg18_v1_chr14_+_30098079_30098144	0.593737	AAUACUG	NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase	BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase
hg18_v1_chr18_+_41560915_41560915	0.593598	AAUACUG	NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chr21_-_38792173_38792297	0.593475	AAUACUG	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr2_+_32142083_32142326	0.588778	AAUACUG	AB029006|SPAST|6683|spastin	BC150260|SPAST|6683|spastin	NM_014946|SPAST|6683|spastin	NM_199436|SPAST|6683|spastin	AJ246001|SPAST|6683|spastin
hg18_v1_chr2_-_142605739_142605739	0.588034	AAUACUG	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg18_v1_chr10_-_126706442_126706442	0.585263	AAUACUG	AF222711|CTBP2|1488|C-terminal binding protein 2	NM_022802|CTBP2|1488|C-terminal binding protein 2
hg18_v1_chr16_+_48744310_48744362	0.584913	AAUACUG	AK300918|PAPD5|64282|PAP associated domain containing 5	NM_001040284|PAPD5|64282|PAP associated domain containing 5	NM_001040285|PAPD5|64282|PAP associated domain containing 5
hg18_v1_chr2_-_19421852_19421868	0.582465	AAUACUG	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)	NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)	AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)
hg18_v1_chr8_-_93184629_93184633	0.581635	AAUACUG	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr3_-_69518119_69518144	0.580385	AAUACUG	NM_015123|FRMD4B|23150|FERM domain containing 4B	BC057836|FRMD4B|23150|FERM domain containing 4B
hg18_v1_chr12_+_5473558_5473641	0.578833	AAUACUG	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg18_v1_chr6_+_47732181_47732284	0.578597	AAUACUG	AY140953|GPR111|222611|G protein-coupled receptor 111	DQ315369|GPR111|222611|G protein-coupled receptor 111	NM_153839|GPR111|222611|G protein-coupled receptor 111
hg18_v1_chr17_+_5126275_5126505	0.571652	AAUACUG	NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1
hg18_v1_chr20_-_4930133_4930188	0.565934	AAUACUG	D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2
hg18_v1_chr1_+_178190493_178190563	0.558229	AAUACUG	AK095601|CEP350|9857|centrosomal protein 350kDa	NM_014810|CEP350|9857|centrosomal protein 350kDa
hg18_v1_chr13_-_32757835_32757900	0.558123	AAUACUG	AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr14_-_38642165_38642203	0.555909	AAUACUG	AK299862|SEC23A|10484|Sec23 homolog A (S. cerevisiae)	BC036649|SEC23A|10484|Sec23 homolog A (S. cerevisiae)	NM_006364|SEC23A|10484|Sec23 homolog A (S. cerevisiae)	AK303485|SEC23A|10484|Sec23 homolog A (S. cerevisiae)
hg18_v1_chr6_+_148705421_148705491	0.550478	AAUACUG	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr2_-_156897286_156897532	0.549497	AAUACUG	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chr2_+_11804190_11804263	0.54547	AAUACUG	BC030537|LPIN1|23175|lipin 1	NM_145693|LPIN1|23175|lipin 1	AK290235|LPIN1|23175|lipin 1	D80010|LPIN1|23175|lipin 1
hg18_v1_chr15_+_45797977_45797977	0.545143	AAUACUG	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg18_v1_chr2_-_202215593_202215684	0.539473	AAUACUG	AK090601|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC029611|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_152388|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr3_+_161040343_161040432	0.534234	AAUACUG	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr4_-_6434473_6434497	0.532113	AAUACUG	AK093115|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma	NM_181876|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma
hg18_v1_chr6_-_57194977_57195083	0.531916	AAUACUG	CR621808|RAB23|51715|RAB23, member RAS oncogene family	AF161486|RAB23|51715|RAB23, member RAS oncogene family	BC015021|RAB23|51715|RAB23, member RAS oncogene family	NM_016277|RAB23|51715|RAB23, member RAS oncogene family	CR749371|RAB23|51715|RAB23, member RAS oncogene family	AK311123|RAB23|51715|RAB23, member RAS oncogene family
hg18_v1_chr14_+_58174489_58174509	0.518457	AAUACUG	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)	NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)
hg18_v1_chr6_+_37333484_37333671	0.510229	AAUACUG	AY313781|TBC1D22B|55633|TBC1 domain family, member 22B	BC047658|TBC1D22B|55633|TBC1 domain family, member 22B	NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B	AK096340|TBC1D22B|55633|TBC1 domain family, member 22B	BC109026|TBC1D22B|55633|TBC1 domain family, member 22B	BC109027|TBC1D22B|55633|TBC1 domain family, member 22B	BX648317|TBC1D22B|55633|TBC1 domain family, member 22B	AK292893|TBC1D22B|55633|TBC1 domain family, member 22B	AB449909|TBC1D22B|55633|TBC1 domain family, member 22B
hg18_v1_chr9_+_127550298_127550298	0.503659	AAUACUG	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3	NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3
hg18_v1_chr8_-_93181091_93181091	0.50103	AAUACUG	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr6_+_87921980_87922037	0.500591	AAUACUG	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg18_v1_chr14_-_69953433_69953585	0.500359	AAUACUG	BC007704|SYNJ2BP|55333|synaptojanin 2 binding protein	CR603483|SYNJ2BP|55333|synaptojanin 2 binding protein	CR622530|SYNJ2BP|55333|synaptojanin 2 binding protein	AK002133|SYNJ2BP|55333|synaptojanin 2 binding protein	AK311719|SYNJ2BP|55333|synaptojanin 2 binding protein	NM_018373|SYNJ2BP|55333|synaptojanin 2 binding protein
hg18_v1_chr20_+_52257800_52257908	0.498114	AAUACUG	NM_002623|PFDN4|5203|prefoldin subunit 4
hg18_v1_chr2_+_178893216_178893216	0.497539	AAUACUG	AK093902|OSBPL6|114880|oxysterol binding protein-like 6	NM_145739|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr12_+_117903682_117903778	0.497233	AAUACUG	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4	AB058756|SRRM4|84530|serine/arginine repetitive matrix 4	BC152471|SRRM4|84530|serine/arginine repetitive matrix 4	BC167162|SRRM4|84530|serine/arginine repetitive matrix 4	BC167163|SRRM4|84530|serine/arginine repetitive matrix 4	NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4
hg18_v1_chr5_-_89861048_89861197	0.497149	AAUACUG	BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3
hg18_v1_chr22_-_20637212_20637251	0.487534	AAUACUG	AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F	NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg18_v1_chr11_+_72697310_72697316	0.485238	AAUACUG	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg18_v1_chr3_+_155321826_155321958	0.483737	AAUACUG	NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26
hg18_v1_chr5_-_111119846_111119846	0.480609	AAUACUG	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr12_-_31635089_31635281	0.474073	AAUACUG	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg18_v1_chr15_-_47235057_47235145	0.47383	AAUACUG	AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	CR614722|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	CR601131|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)
hg18_v1_chr7_+_99919485_99919485	0.47316	AAUACUG	AK124773|C7orf51|222950|chromosome 7 open reading frame 51	NM_173564|C7orf51|222950|chromosome 7 open reading frame 51
hg18_v1_chr2_-_39201066_39201107	0.466819	AAUACUG	L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)	NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg18_v1_chr15_+_67378326_67378359	0.458308	AAUACUG	CR609133|PAQR5|54852|progestin and adipoQ receptor family member V	BC039234|PAQR5|54852|progestin and adipoQ receptor family member V	NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V
hg18_v1_chr16_+_76379901_76380079	0.455281	AAUACUG	AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like	BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like	NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like	AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like
hg18_v1_chr8_+_22280942_22281012	0.454438	AAUACUG	NM_001135153|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14
hg18_v1_chrX_+_46967360_46967360	0.45314	AAUACUG	AK301832|CDK16|5127|cyclin-dependent kinase 16	NM_001170460|CDK16|5127|cyclin-dependent kinase 16
hg18_v1_chr9_-_97310142_97310142	0.452143	AAUACUG	AB189438|PTCH1|5727|patched 1	AB189439|PTCH1|5727|patched 1	NM_001083604|PTCH1|5727|patched 1	NM_001083605|PTCH1|5727|patched 1
hg18_v1_chr1_-_56817823_56817844	0.451066	AAUACUG	NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B
hg18_v1_chr7_-_100124805_100124805	0.450041	AAUACUG	NM_022574|GIGYF1|64599|GRB10 interacting GYF protein 1
hg18_v1_chrX_-_54539043_54539600	0.445598	AAUACUG	AK299635|FGD1|2245|FYVE, RhoGEF and PH domain containing 1	AK226117|FGD1|2245|FYVE, RhoGEF and PH domain containing 1	NM_004463|FGD1|2245|FYVE, RhoGEF and PH domain containing 1	U11690|FGD1|2245|FYVE, RhoGEF and PH domain containing 1
hg18_v1_chr2_-_122123464_122123521	0.440045	AAUACUG	BC112940|CLASP1|23332|cytoplasmic linker associated protein 1	AK091140|CLASP1|23332|cytoplasmic linker associated protein 1	BC132723|CLASP1|23332|cytoplasmic linker associated protein 1	BC144107|CLASP1|23332|cytoplasmic linker associated protein 1	AK299331|CLASP1|23332|cytoplasmic linker associated protein 1	AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1	NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1	NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1	NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1
hg18_v1_chr6_+_126153693_126153737	0.439777	AAUACUG	NM_001122842|NCOA7|135112|nuclear receptor coactivator 7	NM_181782|NCOA7|135112|nuclear receptor coactivator 7
hg18_v1_chr2_-_175207521_175207565	0.437074	AAUACUG	AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1	NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1	AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1	AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg18_v1_chr2_-_37752731_37753056	0.434621	AAUACUG	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr6_+_52643833_52643932	0.43298	AAUACUG	NM_014051|TMEM14A|28978|transmembrane protein 14A	AF239771|TMEM14A|28978|transmembrane protein 14A	AK312063|TMEM14A|28978|transmembrane protein 14A	CR618706|TMEM14A|28978|transmembrane protein 14A	BC015097|TMEM14A|28978|transmembrane protein 14A	BC019328|TMEM14A|28978|transmembrane protein 14A
hg18_v1_chr5_-_57791544_57791673	0.430954	AAUACUG	DQ893653|PLK2|10769|polo-like kinase 2	DQ895830|PLK2|10769|polo-like kinase 2	AF223574|PLK2|10769|polo-like kinase 2	BC013879|PLK2|10769|polo-like kinase 2	AK027851|PLK2|10769|polo-like kinase 2	AK297298|PLK2|10769|polo-like kinase 2	AK098163|PLK2|10769|polo-like kinase 2	AK312505|PLK2|10769|polo-like kinase 2	NM_006622|PLK2|10769|polo-like kinase 2
hg18_v1_chr19_+_38979502_38979650	0.430865	AAUACUG	NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15	NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15	NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15	AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15	AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15	BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15	BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15	AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15	AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15
hg18_v1_chr17_+_54642152_54642206	0.430522	AAUACUG	AF349467|C17orf71|55181|chromosome 17 open reading frame 71	NM_018149|C17orf71|55181|chromosome 17 open reading frame 71	AL834490|C17orf71|55181|chromosome 17 open reading frame 71	AK026858|C17orf71|55181|chromosome 17 open reading frame 71	BC031604|C17orf71|55181|chromosome 17 open reading frame 71
hg18_v1_chr16_+_21926939_21927040	0.42986	AAUACUG	NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52	BC027604|C16orf52|730094|chromosome 16 open reading frame 52	BC053950|C16orf52|730094|chromosome 16 open reading frame 52
hg18_v1_chr1_-_173428455_173428851	0.429363	AAUACUG	D25539|KIAA0040|9674|KIAA0040	BC032361|KIAA0040|9674|KIAA0040	BC111699|KIAA0040|9674|KIAA0040	BC050374|KIAA0040|9674|KIAA0040	BC020789|KIAA0040|9674|KIAA0040	AL049799|KIAA0040|9674|KIAA0040	AK292691|KIAA0040|9674|KIAA0040	NM_001162895|KIAA0040|9674|KIAA0040	NM_014656|KIAA0040|9674|KIAA0040	AL049800|KIAA0040|9674|KIAA0040	CR625052|KIAA0040|9674|KIAA0040	NM_001162893|KIAA0040|9674|KIAA0040	NM_001162894|KIAA0040|9674|KIAA0040
hg18_v1_chr11_-_9243408_9243469	0.428821	AAUACUG	AB029014|DENND5A|23258|DENN/MADD domain containing 5A	BC071596|DENND5A|23258|DENN/MADD domain containing 5A	NM_015213|DENND5A|23258|DENN/MADD domain containing 5A
hg18_v1_chr2_+_203901160_203901600	0.428568	AAUACUG	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr16_-_4106186_4106277	0.428142	AAUACUG	AJ133123|ADCY9|115|adenylate cyclase 9	NM_001116|ADCY9|115|adenylate cyclase 9
hg18_v1_chr7_+_93976927_93977189	0.422716	AAUACUG	BC029543|CASD1|64921|CAS1 domain containing 1	NM_022900|CASD1|64921|CAS1 domain containing 1	BC063284|CASD1|64921|CAS1 domain containing 1	AF397424|CASD1|64921|CAS1 domain containing 1
hg18_v1_chr6_-_13819622_13819807	0.421952	AAUACUG	AB055311|RANBP9|10048|RAN binding protein 9	NM_005493|RANBP9|10048|RAN binding protein 9
hg18_v1_chr1_-_28842103_28842231	0.421952	AAUACUG	BC011986|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa	U57693|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa	X84002|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa	AK310097|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa	NM_001135218|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa	NM_005644|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg18_v1_chr15_-_62460622_62460754	0.421666	AAUACUG	AF529370|KIAA0101|9768|KIAA0101	AY598324|KIAA0101|9768|KIAA0101	CR604158|KIAA0101|9768|KIAA0101	BC005832|KIAA0101|9768|KIAA0101	D14657|KIAA0101|9768|KIAA0101	BC007101|KIAA0101|9768|KIAA0101	AK290748|KIAA0101|9768|KIAA0101	CR595526|KIAA0101|9768|KIAA0101	CR602847|KIAA0101|9768|KIAA0101	BC016782|KIAA0101|9768|KIAA0101	NM_001029989|KIAA0101|9768|KIAA0101	NM_014736|KIAA0101|9768|KIAA0101
hg18_v1_chr15_-_47125788_47126069	0.420607	AAUACUG	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr8_+_74369647_74369999	0.419317	AAUACUG	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)	NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)	BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)	AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)
hg18_v1_chr8_+_107739071_107739257	0.417531	AAUACUG	AK123667|OXR1|55074|oxidation resistance 1	NM_181354|OXR1|55074|oxidation resistance 1	BC035484|OXR1|55074|oxidation resistance 1
hg18_v1_chr10_-_14856901_14856901	0.415278	AAUACUG	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr8_+_107529327_107529327	0.413456	AAUACUG	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr9_+_33807168_33807200	0.412926	AAUACUG	NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2
hg18_v1_chr13_+_26029799_26029870	0.409035	AAUACUG	AK289845|WASF3|10810|WAS protein family, member 3	BC050283|WASF3|10810|WAS protein family, member 3	NM_006646|WASF3|10810|WAS protein family, member 3
hg18_v1_chr4_+_184257337_184257607	0.408598	AAUACUG	NM_024949|WWC2|80014|WW and C2 domain containing 2
hg18_v1_chr17_-_45582872_45582979	0.407968	AAUACUG	AJ401189|PPP1R9B|84687|protein phosphatase 1, regulatory (inhibitor) subunit 9B	NM_032595|PPP1R9B|84687|protein phosphatase 1, regulatory (inhibitor) subunit 9B
hg18_v1_chr17_-_60088773_60088881	0.407562	AAUACUG	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr1_+_181871830_181872100	0.404868	AAUACUG	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr20_+_42947754_42947763	0.40445	AAUACUG	NM_003404|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	NM_139323|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK292717|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC001359|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
hg18_v1_chr17_-_44794325_44794833	0.400986	AAUACUG	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr6_-_139737477_139737477	0.400138	AAUACUG	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr1_-_119991912_119991912	0.398827	AAUACUG	NM_001080470|ZNF697|90874|zinc finger protein 697
hg18_v1_chr16_+_7322751_7322751	0.396489	AAUACUG	AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg18_v1_chr2_-_158193639_158193647	0.396141	AAUACUG	BC022530|ACVR1C|130399|activin A receptor, type IC	NM_001111032|ACVR1C|130399|activin A receptor, type IC	NM_001111033|ACVR1C|130399|activin A receptor, type IC	NM_145259|ACVR1C|130399|activin A receptor, type IC
hg18_v1_chr6_+_1335067_1335181	0.395643	AAUACUG	NM_001452|FOXF2|2295|forkhead box F2	U13220|FOXF2|2295|forkhead box F2
hg18_v1_chr15_+_67393795_67393795	0.393965	AAUACUG	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg18_v1_chr6_-_40010118_40010267	0.393032	AAUACUG	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1	AF034374|MOCS1|4337|molybdenum cofactor synthesis 1	AK091306|MOCS1|4337|molybdenum cofactor synthesis 1	AK056740|MOCS1|4337|molybdenum cofactor synthesis 1	NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1
hg18_v1_chr6_-_16869579_16869773	0.392428	AAUACUG	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg18_v1_chr5_+_138706029_138706097	0.390435	AAUACUG	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr14_-_30565275_30565368	0.384199	AAUACUG	BC126221|STRN3|29966|striatin, calmodulin binding protein 3	BC132673|STRN3|29966|striatin, calmodulin binding protein 3	BC143933|STRN3|29966|striatin, calmodulin binding protein 3	AK314041|STRN3|29966|striatin, calmodulin binding protein 3	AK290229|STRN3|29966|striatin, calmodulin binding protein 3	U17989|STRN3|29966|striatin, calmodulin binding protein 3	NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3	NM_014574|STRN3|29966|striatin, calmodulin binding protein 3
hg18_v1_chr2_-_208598452_208598567	0.383316	AAUACUG	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3	NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3
hg18_v1_chr6_-_166960690_166960726	0.383284	AAUACUG	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chrX_+_9943793_9943794	0.379052	AAUACUG	BC098455|WWC3|55841|WWC family member 3	NM_015691|WWC3|55841|WWC family member 3
hg18_v1_chr7_-_36372971_36373424	0.378968	AAUACUG	BC056191|KIAA0895|23366|KIAA0895	BC136362|KIAA0895|23366|KIAA0895	BC144032|KIAA0895|23366|KIAA0895	AB020702|KIAA0895|23366|KIAA0895	BC110422|KIAA0895|23366|KIAA0895	AK293912|KIAA0895|23366|KIAA0895	AK294686|KIAA0895|23366|KIAA0895	AK302559|KIAA0895|23366|KIAA0895	NM_015314|KIAA0895|23366|KIAA0895
hg18_v1_chr5_+_148186348_148186410	0.376415	AAUACUG	NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface	AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface	BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface	AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface	BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface	CR595085|ADRB2|154|adrenergic, beta-2-, receptor, surface	BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface	X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface
hg18_v1_chr9_-_138126917_138126996	0.37521	AAUACUG	BC015649|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing	NM_144653|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing
hg18_v1_chr11_-_63292688_63292857	0.373782	AAUACUG	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg18_v1_chr6_+_34867721_34867776	0.37343	AAUACUG	NM_017754|UHRF1BP1|54887|UHRF1 binding protein 1	BC026164|UHRF1BP1|54887|UHRF1 binding protein 1
hg18_v1_chr7_-_19715127_19715216	0.37017	AAUACUG	BC070358|TWISTNB|221830|TWIST neighbor	BC013179|TWISTNB|221830|TWIST neighbor	BC130300|TWISTNB|221830|TWIST neighbor	BC014574|TWISTNB|221830|TWIST neighbor	BC130298|TWISTNB|221830|TWIST neighbor	NM_001002926|TWISTNB|221830|TWIST neighbor	BC056267|TWISTNB|221830|TWIST neighbor	AK301329|TWISTNB|221830|TWIST neighbor
hg18_v1_chr2_+_23461802_23461802	0.369652	AAUACUG	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)
hg18_v1_chr8_-_13035102_13035193	0.366587	AAUACUG	AK289734|DLC1|10395|deleted in liver cancer 1	DQ092382|DLC1|10395|deleted in liver cancer 1	AF026219|DLC1|10395|deleted in liver cancer 1	BC095415|DLC1|10395|deleted in liver cancer 1	NM_006094|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr3_+_171167243_171167321	0.364873	AAUACUG	NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)	CR618317|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)	BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)	D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)	U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)	EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)	EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)
hg18_v1_chr13_-_43908972_43908984	0.364457	AAUACUG	CR619287|TSC22D1|8848|TSC22 domain family, member 1	CR591418|TSC22D1|8848|TSC22 domain family, member 1	CR603176|TSC22D1|8848|TSC22 domain family, member 1	CR615671|TSC22D1|8848|TSC22 domain family, member 1	CR625079|TSC22D1|8848|TSC22 domain family, member 1	BC146664|TSC22D1|8848|TSC22 domain family, member 1	BC146679|TSC22D1|8848|TSC22 domain family, member 1	CR609183|TSC22D1|8848|TSC22 domain family, member 1	BC000456|TSC22D1|8848|TSC22 domain family, member 1	CR595498|TSC22D1|8848|TSC22 domain family, member 1	CR603525|TSC22D1|8848|TSC22 domain family, member 1	BC016867|TSC22D1|8848|TSC22 domain family, member 1	CR595193|TSC22D1|8848|TSC22 domain family, member 1	CR608707|TSC22D1|8848|TSC22 domain family, member 1	NM_006022|TSC22D1|8848|TSC22 domain family, member 1	CR594401|TSC22D1|8848|TSC22 domain family, member 1	CR597685|TSC22D1|8848|TSC22 domain family, member 1	CR620680|TSC22D1|8848|TSC22 domain family, member 1	CR620970|TSC22D1|8848|TSC22 domain family, member 1	CR597214|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr12_+_55808514_55808585	0.362591	AAUACUG	BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1	BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1	NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1	X13916|LRP1|4035|low density lipoprotein receptor-related protein 1
hg18_v1_chr6_+_170705345_170705433	0.361941	AAUACUG	NM_001172085|TBP|6908|TATA box binding protein	NM_003194|TBP|6908|TATA box binding protein	AK304648|TBP|6908|TATA box binding protein	AK315222|TBP|6908|TATA box binding protein	BC110341|TBP|6908|TATA box binding protein	CR612496|TBP|6908|TATA box binding protein	CR590323|TBP|6908|TATA box binding protein	Z22828|TBP|6908|TATA box binding protein	AK298272|TBP|6908|TATA box binding protein	M55654|TBP|6908|TATA box binding protein	BC109054|TBP|6908|TATA box binding protein	BC109053|TBP|6908|TATA box binding protein
hg18_v1_chr3_+_50167851_50167970	0.353584	AAUACUG	BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
hg18_v1_chr1_+_35507145_35507154	0.352839	AAUACUG	AK308320|ZMYM4|9202|zinc finger, MYM-type 4	NM_005095|ZMYM4|9202|zinc finger, MYM-type 4
hg18_v1_chr4_-_86106567_86106567	0.351414	AAUACUG	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg18_v1_chr20_-_48165886_48165904	0.351061	AAUACUG	AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1
hg18_v1_chr2_+_27504953_27504986	0.347535	AAUACUG	AK301345|NRBP1|29959|nuclear receptor binding protein 1	NM_013392|NRBP1|29959|nuclear receptor binding protein 1
hg18_v1_chr15_+_91244422_91244559	0.347415	AAUACUG	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr7_+_4688248_4688481	0.347112	AAUACUG	NM_001037165|FOXK1|221937|forkhead box K1
hg18_v1_chr16_-_78192111_78192122	0.34658	AAUACUG	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)
hg18_v1_chr6_+_136214495_136214594	0.345743	AAUACUG	AK290582|PDE7B|27115|phosphodiesterase 7B	AB038040|PDE7B|27115|phosphodiesterase 7B	NM_018945|PDE7B|27115|phosphodiesterase 7B	AJ251860|PDE7B|27115|phosphodiesterase 7B	BC070267|PDE7B|27115|phosphodiesterase 7B
hg18_v1_chr18_-_27777085_27777128	0.340233	AAUACUG	NM_014939|TRAPPC8|22878|trafficking protein particle complex 8	AL136749|TRAPPC8|22878|trafficking protein particle complex 8
hg18_v1_chr8_-_42817604_42817632	0.336001	AAUACUG	AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1	BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1
hg18_v1_chr1_+_143920424_143920533	0.332025	AAUACUG	NM_203458|NOTCH2NL|388677|notch 2 N-terminal like	BC010154|NOTCH2NL|388677|notch 2 N-terminal like	AK075065|NOTCH2NL|388677|notch 2 N-terminal like	BC090943|NOTCH2NL|388677|notch 2 N-terminal like	BC019835|NOTCH2NL|388677|notch 2 N-terminal like	BC065219|NOTCH2NL|388677|notch 2 N-terminal like	CR610471|NOTCH2NL|388677|notch 2 N-terminal like	BC084572|NOTCH2NL|388677|notch 2 N-terminal like
hg18_v1_chr11_+_74137548_74137564	0.324998	AAUACUG	AB082522|RNF169|254225|ring finger protein 169	NM_001098638|RNF169|254225|ring finger protein 169
hg18_v1_chr3_-_71715431_71715905	0.323351	AAUACUG	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr2_+_48395271_48395373	0.323125	AAUACUG	NM_002158|FOXN2|3344|forkhead box N2	BC063305|FOXN2|3344|forkhead box N2
hg18_v1_chr13_+_32058537_32058589	0.320393	AAUACUG	NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg18_v1_chr4_+_38341982_38342461	0.320117	AAUACUG	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr12_-_50502474_50502474	0.318813	AAUACUG	NM_001013690|FIGNL2|401720|fidgetin-like 2
hg18_v1_chr1_-_229627412_229627412	0.317206	AAUACUG	AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)	NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)
hg18_v1_chr16_-_23068010_23068091	0.317158	AAUACUG	AK126752|USP31|57478|ubiquitin specific peptidase 31	AJ586135|USP31|57478|ubiquitin specific peptidase 31	NM_020718|USP31|57478|ubiquitin specific peptidase 31
hg18_v1_chr2_+_169021039_169021204	0.31647	AAUACUG	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr12_-_28014151_28014314	0.315908	AAUACUG	M26958|PTHLH|5744|parathyroid hormone-like hormone	J03802|PTHLH|5744|parathyroid hormone-like hormone	NM_198964|PTHLH|5744|parathyroid hormone-like hormone	NM_198966|PTHLH|5744|parathyroid hormone-like hormone	AK313476|PTHLH|5744|parathyroid hormone-like hormone	BC005961|PTHLH|5744|parathyroid hormone-like hormone	M26959|PTHLH|5744|parathyroid hormone-like hormone
hg18_v1_chr16_-_2125825_2125975	0.314616	AAUACUG	U24497|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)	L33243|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)	NM_000296|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)	NM_001009944|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)
hg18_v1_chr9_-_14304036_14304145	0.313991	AAUACUG	BX648845|NFIB|4781|nuclear factor I/B	NM_001190737|NFIB|4781|nuclear factor I/B	NM_005596|NFIB|4781|nuclear factor I/B
hg18_v1_chr6_+_144040751_144040989	0.312987	AAUACUG	AK298263|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2	CR749345|PHACTR2|9749|phosphatase and actin regulator 2	AK297799|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr5_+_150612805_150613012	0.310876	AAUACUG	NM_000405|GM2A|2760|GM2 ganglioside activator	NM_001167607|GM2A|2760|GM2 ganglioside activator	L01439|GM2A|2760|GM2 ganglioside activator	M76477|GM2A|2760|GM2 ganglioside activator	AK312494|GM2A|2760|GM2 ganglioside activator	X62078|GM2A|2760|GM2 ganglioside activator	AK298867|GM2A|2760|GM2 ganglioside activator	BC009273|GM2A|2760|GM2 ganglioside activator	CR626644|GM2A|2760|GM2 ganglioside activator	X61095|GM2A|2760|GM2 ganglioside activator	DQ891914|GM2A|2760|GM2 ganglioside activator	DQ895098|GM2A|2760|GM2 ganglioside activator	X16087|GM2A|2760|GM2 ganglioside activator
hg18_v1_chr18_-_3001944_3001944	0.309647	AAUACUG	BC152448|LPIN2|9663|lipin 2	D87436|LPIN2|9663|lipin 2	NM_014646|LPIN2|9663|lipin 2
hg18_v1_chr9_+_111582317_111582556	0.308044	AAUACUG	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_053016|PALM2|114299|paralemmin 2	NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ312216|PALM2|114299|paralemmin 2	AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough
hg18_v1_chr16_-_69277355_69277507	0.307061	AAUACUG	NM_138383|MTSS1L|92154|metastasis suppressor 1-like
hg18_v1_chr13_-_44048601_44048700	0.30577	AAUACUG	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr6_-_91063181_91063284	0.303844	AAUACUG	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr4_+_88075176_88075303	0.301454	AAUACUG	AK296149|AFF1|4299|AF4/FMR2 family, member 1	NM_001166693|AFF1|4299|AF4/FMR2 family, member 1	AK300364|AFF1|4299|AF4/FMR2 family, member 1	BC017432|AFF1|4299|AF4/FMR2 family, member 1
hg18_v1_chr7_+_7974941_7974976	0.301115	AAUACUG	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1	BC050291|GLCCI1|113263|glucocorticoid induced transcript 1
hg18_v1_chr8_-_131483395_131483398	0.300076	AAUACUG	BC137135|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	BC144493|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
hg18_v1_chr5_-_172130766_172130868	0.29968	AAUACUG	X68277|DUSP1|1843|dual specificity phosphatase 1	AK300487|DUSP1|1843|dual specificity phosphatase 1	AK298047|DUSP1|1843|dual specificity phosphatase 1	AK298658|DUSP1|1843|dual specificity phosphatase 1	AK304475|DUSP1|1843|dual specificity phosphatase 1	AK316321|DUSP1|1843|dual specificity phosphatase 1	BC022463|DUSP1|1843|dual specificity phosphatase 1	NM_004417|DUSP1|1843|dual specificity phosphatase 1	AK299391|DUSP1|1843|dual specificity phosphatase 1
hg18_v1_chr9_-_97319067_97319159	0.299	AAUACUG	AB189436|PTCH1|5727|patched 1	AB189437|PTCH1|5727|patched 1	NM_001083602|PTCH1|5727|patched 1	NM_001083603|PTCH1|5727|patched 1	BC043542|PTCH1|5727|patched 1
hg18_v1_chr1_-_33420213_33420257	0.297957	AAUACUG	AK122896|TRIM62|55223|tripartite motif containing 62	NM_018207|TRIM62|55223|tripartite motif containing 62
hg18_v1_chr9_-_36390212_36390295	0.296905	AAUACUG	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chr8_-_120033240_120033563	0.29668	AAUACUG	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg18_v1_chr6_-_30692995_30693001	0.293704	AAUACUG	AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	AK307406|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10	NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory (inhibitor) subunit 10
hg18_v1_chr7_+_129913271_129913433	0.292381	AAUACUG	AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)	NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)	CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)	BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)
hg18_v1_chr4_+_88147107_88147583	0.290621	AAUACUG	L13773|AFF1|4299|AF4/FMR2 family, member 1	BC114930|AFF1|4299|AF4/FMR2 family, member 1	NM_005935|AFF1|4299|AF4/FMR2 family, member 1	AK296243|AFF1|4299|AF4/FMR2 family, member 1	L25050|AFF1|4299|AF4/FMR2 family, member 1
hg18_v1_chr12_-_49878216_49878216	0.288229	AAUACUG	AL832881|POU6F1|5463|POU class 6 homeobox 1	NM_002702|POU6F1|5463|POU class 6 homeobox 1
hg18_v1_chr4_+_144477432_144477499	0.287719	AAUACUG	NM_002039|GAB1|2549|GRB2-associated binding protein 1	NM_207123|GAB1|2549|GRB2-associated binding protein 1	AK289767|GAB1|2549|GRB2-associated binding protein 1	BC064848|GAB1|2549|GRB2-associated binding protein 1
hg18_v1_chr14_+_55654607_55654887	0.285559	AAUACUG	BC009476|PELI2|57161|pellino homolog 2 (Drosophila)	NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)	AK315727|PELI2|57161|pellino homolog 2 (Drosophila)
hg18_v1_chr18_-_72336133_72336154	0.285045	AAUACUG	D86975|ZNF516|9658|zinc finger protein 516	NM_014643|ZNF516|9658|zinc finger protein 516
hg18_v1_chr7_+_77005287_77005321	0.284767	AAUACUG	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr6_-_30763650_30763650	0.282268	AAUACUG	AK124880|KIAA1949|170954|KIAA1949	NM_133471|KIAA1949|170954|KIAA1949
hg18_v1_chr10_-_126839546_126839621	0.279909	AAUACUG	BC047018|CTBP2|1488|C-terminal binding protein 2	NM_001083914|CTBP2|1488|C-terminal binding protein 2
hg18_v1_chr5_-_107034484_107034494	0.279316	AAUACUG	AK308672|EFNA5|1946|ephrin-A5	NM_001962|EFNA5|1946|ephrin-A5	U26403|EFNA5|1946|ephrin-A5
hg18_v1_chr7_+_102725105_102725147	0.277883	AAUACUG	NM_004279|PMPCB|9512|peptidase (mitochondrial processing) beta	AK057656|PMPCB|9512|peptidase (mitochondrial processing) beta	AK000994|PMPCB|9512|peptidase (mitochondrial processing) beta	AK289864|PMPCB|9512|peptidase (mitochondrial processing) beta	BC010398|PMPCB|9512|peptidase (mitochondrial processing) beta	AF054182|PMPCB|9512|peptidase (mitochondrial processing) beta	CR597439|PMPCB|9512|peptidase (mitochondrial processing) beta	CR622114|PMPCB|9512|peptidase (mitochondrial processing) beta	AK098616|PMPCB|9512|peptidase (mitochondrial processing) beta	AK297354|PMPCB|9512|peptidase (mitochondrial processing) beta	AK309928|PMPCB|9512|peptidase (mitochondrial processing) beta	CR608633|PMPCB|9512|peptidase (mitochondrial processing) beta	CR594265|PMPCB|9512|peptidase (mitochondrial processing) beta	CR602632|PMPCB|9512|peptidase (mitochondrial processing) beta	CR602907|PMPCB|9512|peptidase (mitochondrial processing) beta	CR611191|PMPCB|9512|peptidase (mitochondrial processing) beta	CR617716|PMPCB|9512|peptidase (mitochondrial processing) beta	DQ892913|PMPCB|9512|peptidase (mitochondrial processing) beta	DQ896162|PMPCB|9512|peptidase (mitochondrial processing) beta	CR595035|PMPCB|9512|peptidase (mitochondrial processing) beta	CR614942|PMPCB|9512|peptidase (mitochondrial processing) beta	CR599164|PMPCB|9512|peptidase (mitochondrial processing) beta
hg18_v1_chr5_-_121441910_121441958	0.27713	AAUACUG	NM_002317|LOX|4015|lysyl oxidase
hg18_v1_chr11_-_127897271_127897417	0.275966	AAUACUG	BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)
hg18_v1_chr5_+_102229425_102229434	0.275725	AAUACUG	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg18_v1_chr13_-_73605914_73606066	0.273148	AAUACUG	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr4_-_153820535_153820766	0.270555	AAUACUG	BC060775|TMEM154|201799|transmembrane protein 154	AK296694|TMEM154|201799|transmembrane protein 154	AK309319|TMEM154|201799|transmembrane protein 154	AK056590|TMEM154|201799|transmembrane protein 154	NM_152680|TMEM154|201799|transmembrane protein 154
hg18_v1_chrX_+_149902415_149902515	0.269838	AAUACUG	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chr1_-_243094431_243094463	0.26971	AAUACUG	AF068846|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)	NM_004501|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)	NM_031844|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg18_v1_chr8_-_13416554_13416799	0.268727	AAUACUG	BC054511|DLC1|10395|deleted in liver cancer 1	AK291682|DLC1|10395|deleted in liver cancer 1	AK024773|DLC1|10395|deleted in liver cancer 1	AK225098|DLC1|10395|deleted in liver cancer 1	AB051510|DLC1|10395|deleted in liver cancer 1	BC049842|DLC1|10395|deleted in liver cancer 1	NM_024767|DLC1|10395|deleted in liver cancer 1	NM_182643|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr16_+_14072380_14072794	0.26772	AAUACUG	AK126948|MKL2|57496|MKL/myocardin-like 2	AK294765|MKL2|57496|MKL/myocardin-like 2	AY374297|MKL2|57496|MKL/myocardin-like 2	NM_014048|MKL2|57496|MKL/myocardin-like 2
hg18_v1_chr15_+_94674849_94675114	0.266528	AAUACUG	BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr6_+_32254108_32254187	0.265095	AAUACUG	CR616890|RNF5|6048|ring finger protein 5	NM_006913|RNF5|6048|ring finger protein 5	BC111392|RNF5|6048|ring finger protein 5
hg18_v1_chr6_+_143971009_143971102	0.263054	AAUACUG	NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2	NM_014721|PHACTR2|9749|phosphatase and actin regulator 2	AK300221|PHACTR2|9749|phosphatase and actin regulator 2	AB014580|PHACTR2|9749|phosphatase and actin regulator 2	BC152416|PHACTR2|9749|phosphatase and actin regulator 2	BC150630|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr5_+_38881719_38881944	0.262987	AAUACUG	NM_003999|OSMR|9180|oncostatin M receptor	BC010943|OSMR|9180|oncostatin M receptor	CR623600|OSMR|9180|oncostatin M receptor	U60805|OSMR|9180|oncostatin M receptor	AK304016|OSMR|9180|oncostatin M receptor	CR593298|OSMR|9180|oncostatin M receptor	BC063468|OSMR|9180|oncostatin M receptor
hg18_v1_chr6_-_112301123_112301334	0.262123	AAUACUG	M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES	M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg18_v1_chr10_+_133768302_133768302	0.261571	AAUACUG	NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3
hg18_v1_chr5_-_102926349_102926412	0.260008	AAUACUG	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12	BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12	NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12	BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12
hg18_v1_chr9_+_127549437_127549605	0.25982	AAUACUG	NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3	X59841|PBX3|5090|pre-B-cell leukemia homeobox 3	BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3	AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3	AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3	AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3	AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3	AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3
hg18_v1_chr1_-_149566792_149566821	0.259607	AAUACUG	BC040300|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta	NM_001198774|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta
hg18_v1_chr8_+_66719441_66719587	0.258706	AAUACUG	NM_001145839|MTFR1|9650|mitochondrial fission regulator 1	NM_014637|MTFR1|9650|mitochondrial fission regulator 1	AK316202|MTFR1|9650|mitochondrial fission regulator 1	BX647507|MTFR1|9650|mitochondrial fission regulator 1	AK304716|MTFR1|9650|mitochondrial fission regulator 1	BC036116|MTFR1|9650|mitochondrial fission regulator 1	BC043498|MTFR1|9650|mitochondrial fission regulator 1	AK298945|MTFR1|9650|mitochondrial fission regulator 1
hg18_v1_chr2_+_166034402_166034458	0.257734	AAUACUG	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr4_+_154293719_154293719	0.257477	AAUACUG	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr19_+_2115119_2115157	0.256435	AAUACUG	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
hg18_v1_chr5_+_14196287_14197057	0.256183	AAUACUG	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)	AF091395|TRIO|7204|triple functional domain (PTPRF interacting)	U42390|TRIO|7204|triple functional domain (PTPRF interacting)
hg18_v1_chr21_-_33022099_33022160	0.254377	AAUACUG	AK307762|SYNJ1|8867|synaptojanin 1	BC019630|SYNJ1|8867|synaptojanin 1	AB020717|SYNJ1|8867|synaptojanin 1	NM_001160302|SYNJ1|8867|synaptojanin 1	NM_001160306|SYNJ1|8867|synaptojanin 1	AF009039|SYNJ1|8867|synaptojanin 1	AF009040|SYNJ1|8867|synaptojanin 1
hg18_v1_chrX_+_16714452_16714607	0.253329	AAUACUG	NM_001168683|TXLNG|55787|taxilin gamma	NM_018360|TXLNG|55787|taxilin gamma	AK002071|TXLNG|55787|taxilin gamma	BC101572|TXLNG|55787|taxilin gamma	BC101576|TXLNG|55787|taxilin gamma	AY739713|TXLNG|55787|taxilin gamma
hg18_v1_chr1_-_149566756_149566791	0.252515	AAUACUG	AK311292|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta	NM_001198773|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta	NM_001198775|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta	NM_002651|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta
hg18_v1_chr8_+_106400322_106400322	0.25238	AAUACUG	AF119334|ZFPM2|23414|zinc finger protein, multitype 2	BC109222|ZFPM2|23414|zinc finger protein, multitype 2	BC109223|ZFPM2|23414|zinc finger protein, multitype 2	NM_012082|ZFPM2|23414|zinc finger protein, multitype 2
hg18_v1_chr6_-_109521969_109522022	0.251544	AAUACUG	AF033122|SESN1|27244|sestrin 1	NM_014454|SESN1|27244|sestrin 1	BC113569|SESN1|27244|sestrin 1	BC112036|SESN1|27244|sestrin 1
hg18_v1_chr4_-_120767777_120767930	0.250511	AAUACUG	AM392687|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM392735|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM392945|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393171|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393311|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393426|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393432|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393814|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AY264918|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AB015656|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033430|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr10_-_80875097_80875435	0.249484	AAUACUG	AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24	AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24	BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24	BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24	BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24	NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24
hg18_v1_chr6_-_122834580_122834724	0.249472	AAUACUG	AL137261|SERINC1|57515|serine incorporator 1	AF164794|SERINC1|57515|serine incorporator 1	AB033079|SERINC1|57515|serine incorporator 1	BC014412|SERINC1|57515|serine incorporator 1	BC028607|SERINC1|57515|serine incorporator 1	BC033029|SERINC1|57515|serine incorporator 1	NM_020755|SERINC1|57515|serine incorporator 1	AK075339|SERINC1|57515|serine incorporator 1	AY358429|SERINC1|57515|serine incorporator 1	AF087902|SERINC1|57515|serine incorporator 1
hg18_v1_chr3_-_33734747_33734851	0.24842	AAUACUG	AK091451|CLASP2|23122|cytoplasmic linker associated protein 2	NM_015097|CLASP2|23122|cytoplasmic linker associated protein 2
hg18_v1_chr7_+_104441730_104442291	0.248222	AAUACUG	AY147037|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	NM_018682|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	NM_182931|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	BC053906|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	BC062583|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	BC009061|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	BC001296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	BC142987|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	BC040004|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	AF519459|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	AK000940|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	BC040848|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)
hg18_v1_chr5_-_111121150_111121364	0.246416	AAUACUG	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr17_+_70495318_70495354	0.246391	AAUACUG	AK294006|CDR2L|30850|cerebellar degeneration-related protein 2-like	BC047534|CDR2L|30850|cerebellar degeneration-related protein 2-like	NM_014603|CDR2L|30850|cerebellar degeneration-related protein 2-like
hg18_v1_chr3_-_52065130_52065500	0.24485	AAUACUG	X93921|DUSP7|1849|dual specificity phosphatase 7	BC019107|DUSP7|1849|dual specificity phosphatase 7	AF508727|DUSP7|1849|dual specificity phosphatase 7	BC104880|DUSP7|1849|dual specificity phosphatase 7	BC104882|DUSP7|1849|dual specificity phosphatase 7	NM_001947|DUSP7|1849|dual specificity phosphatase 7
hg18_v1_chr8_+_97575052_97575057	0.243536	AAUACUG	NM_002998|SDC2|6383|syndecan 2
hg18_v1_chr5_-_111121691_111121813	0.243224	AAUACUG	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr2_-_86418716_86418716	0.243009	AAUACUG	AK297287|REEP1|65055|receptor accessory protein 1	NM_001164730|REEP1|65055|receptor accessory protein 1
hg18_v1_chr15_-_57013092_57013155	0.242872	AAUACUG	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg18_v1_chr3_+_33130451_33130558	0.241889	AAUACUG	NM_006371|CRTAP|10491|cartilage associated protein	AK314719|CRTAP|10491|cartilage associated protein	AK298250|CRTAP|10491|cartilage associated protein	AK075401|CRTAP|10491|cartilage associated protein	AK126433|CRTAP|10491|cartilage associated protein	AK001634|CRTAP|10491|cartilage associated protein	AK091772|CRTAP|10491|cartilage associated protein	CR622212|CRTAP|10491|cartilage associated protein	BC008745|CRTAP|10491|cartilage associated protein	AK097650|CRTAP|10491|cartilage associated protein	CR618116|CRTAP|10491|cartilage associated protein	AK092990|CRTAP|10491|cartilage associated protein
hg18_v1_chrX_+_134482212_134482259	0.241062	AAUACUG	BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
hg18_v1_chrX_+_73557809_73558134	0.238892	AAUACUG	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)
hg18_v1_chr9_+_35528628_35528628	0.238684	AAUACUG	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr9_+_494661_494835	0.235873	AAUACUG	BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1	AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1	NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1	AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1	AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1	AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1	AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1
hg18_v1_chr9_-_126743115_126743206	0.234218	AAUACUG	BC032853|GOLGA1|2800|golgin A1	U51587|GOLGA1|2800|golgin A1	NM_002077|GOLGA1|2800|golgin A1
hg18_v1_chr16_+_70437394_70437451	0.232448	AAUACUG	NM_001137675|ATXN1L|342371|ataxin 1-like
hg18_v1_chr3_-_184180985_184181062	0.231355	AAUACUG	AF456425|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	AF456426|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	AF292100|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	AK314480|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	BC009478|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	AK056335|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	AK297328|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	NM_020640|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
hg18_v1_chr1_+_10995265_10995330	0.229742	AAUACUG	NM_007375|TARDBP|23435|TAR DNA binding protein	AK299454|TARDBP|23435|TAR DNA binding protein	AK312416|TARDBP|23435|TAR DNA binding protein	BC001487|TARDBP|23435|TAR DNA binding protein	BC095435|TARDBP|23435|TAR DNA binding protein	BC071657|TARDBP|23435|TAR DNA binding protein	AL050265|TARDBP|23435|TAR DNA binding protein	AK222754|TARDBP|23435|TAR DNA binding protein	AK295920|TARDBP|23435|TAR DNA binding protein
hg18_v1_chr8_-_17702665_17702886	0.227311	AAUACUG	AY363099|MTUS1|57509|microtubule associated tumor suppressor 1	AK310871|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001924|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001925|MTUS1|57509|microtubule associated tumor suppressor 1	FJ458441|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr10_+_31648103_31648176	0.227128	AAUACUG	NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1	AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1	AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1	AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1	AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1	AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1	AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1	U12170|ZEB1|6935|zinc finger E-box binding homeobox 1	AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1	AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1	BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1	BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1	BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1	BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1	AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1
hg18_v1_chr21_-_33022187_33022221	0.22682	AAUACUG	NM_003895|SYNJ1|8867|synaptojanin 1	NM_203446|SYNJ1|8867|synaptojanin 1
hg18_v1_chr5_-_111120929_111121032	0.22562	AAUACUG	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr3_+_67131416_67131420	0.224957	AAUACUG	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8	AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8	AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8
hg18_v1_chr17_+_34871214_34871343	0.223417	AAUACUG	NM_015083|CDK12|51755|cyclin-dependent kinase 12	NM_016507|CDK12|51755|cyclin-dependent kinase 12	AK302645|CDK12|51755|cyclin-dependent kinase 12
hg18_v1_chr17_-_24972471_24972566	0.223039	AAUACUG	AK096431|CORO6|84940|coronin 6	NM_032854|CORO6|84940|coronin 6
hg18_v1_chr7_-_35044177_35044177	0.220224	AAUACUG	DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)	NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)
hg18_v1_chr4_+_154345039_154345071	0.21985	AAUACUG	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr9_-_98368913_98369023	0.219415	AAUACUG	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr7_+_73341640_73341807	0.21739	AAUACUG	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2	BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2	NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2
hg18_v1_chr15_+_94670160_94670170	0.216815	AAUACUG	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr3_+_183993978_183993984	0.216491	AAUACUG	BC042180|ATP11B|23200|ATPase, class VI, type 11B	NM_014616|ATP11B|23200|ATPase, class VI, type 11B
hg18_v1_chr9_-_106730256_106730346	0.215565	AAUACUG	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg18_v1_chr17_-_50854054_50854454	0.21469	AAUACUG	CR541893|MMD|23531|monocyte to macrophage differentiation-associated	DQ892362|MMD|23531|monocyte to macrophage differentiation-associated	DQ895569|MMD|23531|monocyte to macrophage differentiation-associated	X85750|MMD|23531|monocyte to macrophage differentiation-associated	AK312760|MMD|23531|monocyte to macrophage differentiation-associated	AK303810|MMD|23531|monocyte to macrophage differentiation-associated	BC026324|MMD|23531|monocyte to macrophage differentiation-associated	AY424289|MMD|23531|monocyte to macrophage differentiation-associated	NM_012329|MMD|23531|monocyte to macrophage differentiation-associated
hg18_v1_chr12_-_30740072_30740195	0.213391	AAUACUG	NM_006390|IPO8|10526|importin 8
hg18_v1_chr1_-_117011824_117011989	0.213142	AAUACUG	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg18_v1_chr7_+_16759845_16760117	0.212537	AAUACUG	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	CR600961|TSPAN13|27075|tetraspanin 13	CR597593|TSPAN13|27075|tetraspanin 13	CR612419|TSPAN13|27075|tetraspanin 13	CR598448|TSPAN13|27075|tetraspanin 13	CR598804|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	CR591620|TSPAN13|27075|tetraspanin 13	CR602288|TSPAN13|27075|tetraspanin 13	CR612760|TSPAN13|27075|tetraspanin 13	CR612597|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg18_v1_chr9_+_80101810_80101946	0.212286	AAUACUG	AK295222|PSAT1|29968|phosphoserine aminotransferase 1	AK295310|PSAT1|29968|phosphoserine aminotransferase 1	NM_021154|PSAT1|29968|phosphoserine aminotransferase 1	NM_058179|PSAT1|29968|phosphoserine aminotransferase 1	BC004863|PSAT1|29968|phosphoserine aminotransferase 1	BC018129|PSAT1|29968|phosphoserine aminotransferase 1	CR595610|PSAT1|29968|phosphoserine aminotransferase 1	CR604215|PSAT1|29968|phosphoserine aminotransferase 1	BC000971|PSAT1|29968|phosphoserine aminotransferase 1	AK025460|PSAT1|29968|phosphoserine aminotransferase 1	BC016645|PSAT1|29968|phosphoserine aminotransferase 1	AY131232|PSAT1|29968|phosphoserine aminotransferase 1	AF113132|PSAT1|29968|phosphoserine aminotransferase 1	DQ894126|PSAT1|29968|phosphoserine aminotransferase 1	BT006840|PSAT1|29968|phosphoserine aminotransferase 1
hg18_v1_chr5_-_141372721_141372803	0.211951	AAUACUG	D31766|GNPDA1|10007|glucosamine-6-phosphate deaminase 1	AK290686|GNPDA1|10007|glucosamine-6-phosphate deaminase 1	AK022779|GNPDA1|10007|glucosamine-6-phosphate deaminase 1	AK296452|GNPDA1|10007|glucosamine-6-phosphate deaminase 1	BC020769|GNPDA1|10007|glucosamine-6-phosphate deaminase 1	BC022322|GNPDA1|10007|glucosamine-6-phosphate deaminase 1	CR609510|GNPDA1|10007|glucosamine-6-phosphate deaminase 1	NM_005471|GNPDA1|10007|glucosamine-6-phosphate deaminase 1
hg18_v1_chr15_+_55671393_55671522	0.210139	AAUACUG	BC101645|GCOM1|145781|GRINL1A complex locus	NM_001018090|GCOM1|145781|GRINL1A complex locus	NM_001018091|GCOM1|145781|GRINL1A complex locus	NM_001018100|GCOM1|145781|GRINL1A complex locus	NM_152451|GCOM1|145781|GRINL1A complex locus	BC112148|GCOM1|145781|GRINL1A complex locus	AK055535|GCOM1|145781|GRINL1A complex locus	CR617486|GCOM1|145781|GRINL1A complex locus	FJ970029|GCOM1|145781|GRINL1A complex locus	AY207007|GCOM1|145781|GRINL1A complex locus	AY207459|GCOM1|145781|GRINL1A complex locus	AY208913|GCOM1|145781|GRINL1A complex locus	AY237639|GCOM1|145781|GRINL1A complex locus	AY331564|GCOM1|145781|GRINL1A complex locus	AY333779|GCOM1|145781|GRINL1A complex locus	AY334560|GCOM1|145781|GRINL1A complex locus	AY334561|GCOM1|145781|GRINL1A complex locus	AY334562|GCOM1|145781|GRINL1A complex locus	AY341345|GCOM1|145781|GRINL1A complex locus	AY353057|GCOM1|145781|GRINL1A complex locus	AY353058|GCOM1|145781|GRINL1A complex locus	AY353060|GCOM1|145781|GRINL1A complex locus
hg18_v1_chr7_+_94374862_94374943	0.209028	AAUACUG	NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A
hg18_v1_chr1_+_203064397_203064473	0.207697	AAUACUG	BC040674|NFASC|23114|neurofascin	NM_001005388|NFASC|23114|neurofascin	NM_001005389|NFASC|23114|neurofascin	NM_001160332|NFASC|23114|neurofascin	NM_001160333|NFASC|23114|neurofascin	NM_015090|NFASC|23114|neurofascin	AK295291|NFASC|23114|neurofascin	AK299262|NFASC|23114|neurofascin	AK090639|NFASC|23114|neurofascin
hg18_v1_chr8_-_95976599_95976657	0.205998	AAUACUG	BC007015|CCNE2|9134|cyclin E2	BC020729|CCNE2|9134|cyclin E2	NM_057749|CCNE2|9134|cyclin E2
hg18_v1_chr1_-_94475840_94475894	0.203917	AAUACUG	BC067839|ARHGAP29|9411|Rho GTPase activating protein 29	NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29
hg18_v1_chr9_-_72219359_72219392	0.203619	AAUACUG	D31716|KLF9|687|Kruppel-like factor 9	S72504|KLF9|687|Kruppel-like factor 9	NM_001206|KLF9|687|Kruppel-like factor 9
hg18_v1_chr5_-_111120817_111120853	0.200639	AAUACUG	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr6_-_97837772_97837851	0.200364	AAUACUG	AK128060|MMS22L|253714|MMS22-like, DNA repair protein	NM_198468|MMS22L|253714|MMS22-like, DNA repair protein	BC142948|MMS22L|253714|MMS22-like, DNA repair protein	CR749822|MMS22L|253714|MMS22-like, DNA repair protein
hg18_v1_chr4_-_123092358_123092358	0.199478	AAUACUG	AY865574|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	NM_001130698|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3
hg18_v1_chr6_-_119079712_119079746	0.196978	AAUACUG	BC048977|C6orf204|387119|chromosome 6 open reading frame 204	BC052778|C6orf204|387119|chromosome 6 open reading frame 204	NM_001042475|C6orf204|387119|chromosome 6 open reading frame 204	NM_206921|C6orf204|387119|chromosome 6 open reading frame 204	BC036553|C6orf204|387119|chromosome 6 open reading frame 204
hg18_v1_chr6_+_43246897_43247166	0.196483	AAUACUG	NM_003131|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	BC052572|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	J03161|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	CR595609|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)
hg18_v1_chr14_-_52487558_52487676	0.196393	AAUACUG	BC017327|FERMT2|10979|fermitin family member 2	NM_001134999|FERMT2|10979|fermitin family member 2	NM_001135000|FERMT2|10979|fermitin family member 2	NM_006832|FERMT2|10979|fermitin family member 2
hg18_v1_chr11_-_123030510_123030524	0.196129	AAUACUG	AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta	NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta	NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg18_v1_chr1_-_203868622_203868622	0.195065	AAUACUG	NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)	NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)
hg18_v1_chr21_+_16024241_16024583	0.194436	AAUACUG	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr12_+_70434920_70434925	0.194408	AAUACUG	BC021901|RAB21|23011|RAB21, member RAS oncogene family	BC092475|RAB21|23011|RAB21, member RAS oncogene family	AF091035|RAB21|23011|RAB21, member RAS oncogene family	NM_014999|RAB21|23011|RAB21, member RAS oncogene family
hg18_v1_chr12_+_32546243_32546370	0.1942	AAUACUG	BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4
hg18_v1_chr10_-_101935676_101935776	0.193768	AAUACUG	NM_006459|ERLIN1|10613|ER lipid raft associated 1	AK222480|ERLIN1|10613|ER lipid raft associated 1	AK298427|ERLIN1|10613|ER lipid raft associated 1	AK315580|ERLIN1|10613|ER lipid raft associated 1
hg18_v1_chr18_-_55177430_55177488	0.192775	AAUACUG	CR625542|LMAN1|3998|lectin, mannose-binding, 1	DQ891254|LMAN1|3998|lectin, mannose-binding, 1	DQ894440|LMAN1|3998|lectin, mannose-binding, 1	U09716|LMAN1|3998|lectin, mannose-binding, 1	AK223208|LMAN1|3998|lectin, mannose-binding, 1	AK225108|LMAN1|3998|lectin, mannose-binding, 1	AK312869|LMAN1|3998|lectin, mannose-binding, 1	BC008401|LMAN1|3998|lectin, mannose-binding, 1	CR609154|LMAN1|3998|lectin, mannose-binding, 1	BC032330|LMAN1|3998|lectin, mannose-binding, 1	CR618370|LMAN1|3998|lectin, mannose-binding, 1	BC017858|LMAN1|3998|lectin, mannose-binding, 1	X71661|LMAN1|3998|lectin, mannose-binding, 1	AK301244|LMAN1|3998|lectin, mannose-binding, 1	CR592087|LMAN1|3998|lectin, mannose-binding, 1	NM_005570|LMAN1|3998|lectin, mannose-binding, 1
hg18_v1_chr9_+_117955890_117955892	0.192603	AAUACUG	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1
hg18_v1_chr14_+_35365266_35365443	0.19199	AAUACUG	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	CR595618|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	CR612796|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like
hg18_v1_chr2_-_25328452_25328968	0.191956	AAUACUG	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha
hg18_v1_chr22_+_39818553_39818591	0.190702	AAUACUG	NM_001429|EP300|2033|E1A binding protein p300	BC053889|EP300|2033|E1A binding protein p300
hg18_v1_chr5_-_98290117_98290139	0.189784	AAUACUG	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg18_v1_chr2_-_213724577_213724577	0.189506	AAUACUG	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr16_+_79906065_79906076	0.18907	AAUACUG	AK095378|GAN|8139|gigaxonin	NM_022041|GAN|8139|gigaxonin	AF291673|GAN|8139|gigaxonin
hg18_v1_chr3_-_114898003_114898202	0.187136	AAUACUG	BC043383|KIAA2018|205717|KIAA2018	NM_001009899|KIAA2018|205717|KIAA2018
hg18_v1_chr1_+_169721260_169721377	0.187055	AAUACUG	BC066968|PRRC2C|23215|proline-rich coiled-coil 2C	NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C	BC058930|PRRC2C|23215|proline-rich coiled-coil 2C	BC026108|PRRC2C|23215|proline-rich coiled-coil 2C	BC045713|PRRC2C|23215|proline-rich coiled-coil 2C	BC001260|PRRC2C|23215|proline-rich coiled-coil 2C	BC006090|PRRC2C|23215|proline-rich coiled-coil 2C
hg18_v1_chr1_+_82038669_82038669	0.186674	AAUACUG	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg18_v1_chr3_-_197714762_197715188	0.183617	AAUACUG	BC017442|RNF168|165918|ring finger protein 168	BC033791|RNF168|165918|ring finger protein 168	AK054732|RNF168|165918|ring finger protein 168	NM_152617|RNF168|165918|ring finger protein 168
hg18_v1_chr8_-_116750277_116750401	0.183113	AAUACUG	BC125020|TRPS1|7227|trichorhinophalangeal syndrome I	AK309357|TRPS1|7227|trichorhinophalangeal syndrome I	NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I
hg18_v1_chr15_+_36332258_36332370	0.182734	AAUACUG	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1	AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr3_-_137395966_137395999	0.180538	AAUACUG	AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)	NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)
hg18_v1_chr12_-_123617962_123618094	0.179178	AAUACUG	AB209089|NCOR2|9612|nuclear receptor corepressor 2	NM_001077261|NCOR2|9612|nuclear receptor corepressor 2	NM_006312|NCOR2|9612|nuclear receptor corepressor 2
hg18_v1_chr8_-_93176618_93176665	0.178988	AAUACUG	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr20_+_32755778_32755951	0.178874	AAUACUG	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chr6_+_153060722_153060874	0.178618	AAUACUG	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	CR599312|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg18_v1_chr17_+_55325224_55325265	0.177935	AAUACUG	NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg18_v1_chr12_+_97563049_97563208	0.177544	AAUACUG	AK307509|APAF1|317|apoptotic peptidase activating factor 1	AF013263|APAF1|317|apoptotic peptidase activating factor 1	NM_001160|APAF1|317|apoptotic peptidase activating factor 1	NM_013229|APAF1|317|apoptotic peptidase activating factor 1	NM_181861|APAF1|317|apoptotic peptidase activating factor 1	NM_181868|APAF1|317|apoptotic peptidase activating factor 1	NM_181869|APAF1|317|apoptotic peptidase activating factor 1
hg18_v1_chr2_+_98427737_98427844	0.177028	AAUACUG	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa
hg18_v1_chr2_+_200878848_200878860	0.176537	AAUACUG	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg18_v1_chr1_+_198975227_198975361	0.17578	AAUACUG	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr4_+_166468266_166468345	0.175146	AAUACUG	NM_001017369|SC4MOL|6307|sterol-C4-methyl oxidase-like	NM_006745|SC4MOL|6307|sterol-C4-methyl oxidase-like	CR623543|SC4MOL|6307|sterol-C4-methyl oxidase-like	U93162|SC4MOL|6307|sterol-C4-methyl oxidase-like	BC107879|SC4MOL|6307|sterol-C4-methyl oxidase-like	AK295432|SC4MOL|6307|sterol-C4-methyl oxidase-like	AK292418|SC4MOL|6307|sterol-C4-methyl oxidase-like	AK309206|SC4MOL|6307|sterol-C4-methyl oxidase-like	CR617900|SC4MOL|6307|sterol-C4-methyl oxidase-like	CR623263|SC4MOL|6307|sterol-C4-methyl oxidase-like
hg18_v1_chr10_-_11693535_11693750	0.174632	AAUACUG	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr4_-_146320243_146320281	0.174596	AAUACUG	AK302581|OTUD4|54726|OTU domain containing 4	NM_001102653|OTUD4|54726|OTU domain containing 4
hg18_v1_chr2_-_54051290_54051481	0.173903	AAUACUG	D38521|PSME4|23198|proteasome (prosome, macropain) activator subunit 4	AY894756|PSME4|23198|proteasome (prosome, macropain) activator subunit 4	AY894754|PSME4|23198|proteasome (prosome, macropain) activator subunit 4	AY894755|PSME4|23198|proteasome (prosome, macropain) activator subunit 4	NM_014614|PSME4|23198|proteasome (prosome, macropain) activator subunit 4
hg18_v1_chr1_+_203179976_203180066	0.172866	AAUACUG	NM_001160331|NFASC|23114|neurofascin	BC137013|NFASC|23114|neurofascin	BC144454|NFASC|23114|neurofascin	BC144455|NFASC|23114|neurofascin
hg18_v1_chr2_-_201644634_201644661	0.172778	AAUACUG	AK124184|FAM126B|285172|family with sequence similarity 126, member B	BC039295|FAM126B|285172|family with sequence similarity 126, member B	NM_173822|FAM126B|285172|family with sequence similarity 126, member B
hg18_v1_chr8_-_93099040_93099083	0.172436	AAUACUG	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr11_+_111353218_111353335	0.172018	AAUACUG	NM_033425|DIXDC1|85458|DIX domain containing 1	AK289807|DIXDC1|85458|DIX domain containing 1	BC033034|DIXDC1|85458|DIX domain containing 1	AB051522|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr8_+_90839109_90839225	0.170429	AAUACUG	NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2	CR596906|RIPK2|8767|receptor-interacting serine-threonine kinase 2	BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2	CR592019|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg18_v1_chr17_+_38575939_38576099	0.170172	AAUACUG	D30756|NBR1|4077|neighbor of BRCA1 gene 1	NM_031862|NBR1|4077|neighbor of BRCA1 gene 1	AF227189|NBR1|4077|neighbor of BRCA1 gene 1	NM_031858|NBR1|4077|neighbor of BRCA1 gene 1
hg18_v1_chr2_-_206659140_206659172	0.168542	AAUACUG	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg18_v1_chr1_-_215329569_215329600	0.168323	AAUACUG	AF058291|ESRRG|2104|estrogen-related receptor gamma	AK298851|ESRRG|2104|estrogen-related receptor gamma	AK291028|ESRRG|2104|estrogen-related receptor gamma	NM_206594|ESRRG|2104|estrogen-related receptor gamma	NM_206595|ESRRG|2104|estrogen-related receptor gamma	BX649009|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr2_-_73193581_73193653	0.168204	AAUACUG	AF334812|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)	AB020664|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)	NM_015470|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)
hg18_v1_chr17_+_64019693_64019744	0.166865	AAUACUG	NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)
hg18_v1_chr8_+_27547379_27547616	0.166787	AAUACUG	AB007829|SCARA3|51435|scavenger receptor class A, member 3	AB007830|SCARA3|51435|scavenger receptor class A, member 3	NM_016240|SCARA3|51435|scavenger receptor class A, member 3	NM_182826|SCARA3|51435|scavenger receptor class A, member 3	BC075067|SCARA3|51435|scavenger receptor class A, member 3	BC075068|SCARA3|51435|scavenger receptor class A, member 3
hg18_v1_chr1_+_191357680_191357742	0.166429	AAUACUG	NM_024529|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg18_v1_chr15_-_73530829_73531081	0.165969	AAUACUG	BC137098|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	BC137099|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	AF418569|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	AK027559|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	NM_015477|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	BC066364|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	BX649162|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)
hg18_v1_chr10_-_126839056_126839157	0.165955	AAUACUG	BC052276|CTBP2|1488|C-terminal binding protein 2	AL833398|CTBP2|1488|C-terminal binding protein 2	BC002486|CTBP2|1488|C-terminal binding protein 2	NM_001329|CTBP2|1488|C-terminal binding protein 2
hg18_v1_chr22_-_20419975_20420122	0.165428	AAUACUG	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg18_v1_chr1_-_196011152_196011251	0.165275	AAUACUG	BC016588|DENND1B|163486|DENN/MADD domain containing 1B	NM_001195215|DENND1B|163486|DENN/MADD domain containing 1B	NM_001195216|DENND1B|163486|DENN/MADD domain containing 1B	NM_144977|DENND1B|163486|DENN/MADD domain containing 1B
hg18_v1_chr8_-_52974260_52974300	0.164869	AAUACUG	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
hg18_v1_chr10_+_22649977_22650047	0.164664	AAUACUG	NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene
hg18_v1_chr14_+_66777578_66778255	0.164423	AAUACUG	BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg18_v1_chr18_+_53865455_53865455	0.163168	AAUACUG	AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr2_-_9688552_9688601	0.162749	AAUACUG	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
hg18_v1_chr1_+_32251988_32252183	0.162594	AAUACUG	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR606103|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR625346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	CR616264|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg18_v1_chr11_+_93916653_93916801	0.162269	AAUACUG	AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)	NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)	M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)	BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)	BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg18_v1_chrX_-_110541029_110541029	0.160626	AAUACUG	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg18_v1_chr12_-_28016182_28016182	0.160072	AAUACUG	NM_002820|PTHLH|5744|parathyroid hormone-like hormone	NM_198965|PTHLH|5744|parathyroid hormone-like hormone
hg18_v1_chr2_+_32244406_32244461	0.159791	AAUACUG	NM_001193513|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_001193514|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_001193515|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_017964|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK055663|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK096672|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK127716|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK304225|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	BC066903|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	EF560719|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	EF560726|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AL832755|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AF173387|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6
hg18_v1_chr21_-_35182842_35182860	0.158185	AAUACUG	BC050363|RUNX1|861|runt-related transcription factor 1	X79549|RUNX1|861|runt-related transcription factor 1	D43967|RUNX1|861|runt-related transcription factor 1	D43968|RUNX1|861|runt-related transcription factor 1	NM_001001890|RUNX1|861|runt-related transcription factor 1	NM_001122607|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr8_-_71478560_71478601	0.156494	AAUACUG	NM_006540|NCOA2|10499|nuclear receptor coactivator 2	X97674|NCOA2|10499|nuclear receptor coactivator 2	AK308426|NCOA2|10499|nuclear receptor coactivator 2
hg18_v1_chr21_-_29286982_29287147	0.156036	AAUACUG	BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1	AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1	AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1	BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1	BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1	BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1	AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1	BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1	NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1
hg18_v1_chr14_-_104706159_104706205	0.15572	AAUACUG	AF029778|JAG2|3714|jagged 2	AF029779|JAG2|3714|jagged 2	NM_002226|JAG2|3714|jagged 2	NM_145159|JAG2|3714|jagged 2
hg18_v1_chr2_+_166137091_166137100	0.155686	AAUACUG	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr1_+_52294444_52294532	0.154404	AAUACUG	NM_001136497|BTF3L4|91408|basic transcription factor 3-like 4	NM_152265|BTF3L4|91408|basic transcription factor 3-like 4
hg18_v1_chr2_-_39517633_39517794	0.153365	AAUACUG	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr15_-_27901828_27902003	0.153187	AAUACUG	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)	BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)	NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)	NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)
hg18_v1_chr5_-_89806188_89806480	0.1525	AAUACUG	BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2	NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2
hg18_v1_chr3_-_162572441_162572564	0.151934	AAUACUG	AF458592|C3orf57|165679|chromosome 3 open reading frame 57	BC037817|C3orf57|165679|chromosome 3 open reading frame 57	NM_001040100|C3orf57|165679|chromosome 3 open reading frame 57
hg18_v1_chr22_+_19601619_19601720	0.151711	AAUACUG	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr17_+_42355482_42355491	0.150861	AAUACUG	NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2	NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2	NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2
hg18_v1_chr19_-_45483088_45483104	0.150853	AAUACUG	AK294453|AKT2|208|v-akt murine thymoma viral oncogene homolog 2	AK308906|AKT2|208|v-akt murine thymoma viral oncogene homolog 2	NM_001626|AKT2|208|v-akt murine thymoma viral oncogene homolog 2
hg18_v1_chr9_-_110922030_110922052	0.150633	AAUACUG	AF153415|C9orf5|23731|chromosome 9 open reading frame 5	NM_032012|C9orf5|23731|chromosome 9 open reading frame 5
hg18_v1_chr4_-_120769275_120769428	0.149975	AAUACUG	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr7_+_6380614_6380891	0.149705	AAUACUG	NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	CR612844|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	CR624356|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	CR621312|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
hg18_v1_chr9_+_86473273_86473290	0.149098	AAUACUG	BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2
hg18_v1_chr16_-_73198515_73198542	0.148784	AAUACUG	NM_001145666|GLG1|2734|golgi glycoprotein 1	NM_001145667|GLG1|2734|golgi glycoprotein 1	NM_012201|GLG1|2734|golgi glycoprotein 1
hg18_v1_chr6_-_57194163_57194215	0.148123	AAUACUG	AB034244|RAB23|51715|RAB23, member RAS oncogene family	AK313796|RAB23|51715|RAB23, member RAS oncogene family	NM_183227|RAB23|51715|RAB23, member RAS oncogene family
hg18_v1_chr9_+_34980266_34980291	0.147794	AAUACUG	AK299647|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	NM_001135005|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5
hg18_v1_chr4_-_123073642_123073717	0.147223	AAUACUG	AB255423|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	AB255424|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC093682|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC093684|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	BC143239|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	NM_003305|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3
hg18_v1_chr12_+_77963563_77963602	0.146668	AAUACUG	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg18_v1_chr11_+_109469296_109469385	0.146299	AAUACUG	NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C	AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C
hg18_v1_chr2_+_15649220_15649220	0.146266	AAUACUG	NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
hg18_v1_chr1_+_87566738_87566752	0.14448	AAUACUG	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg18_v1_chr1_+_200775864_200775943	0.144318	AAUACUG	AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B
hg18_v1_chr16_+_51646292_51646473	0.14335	AAUACUG	AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9	BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9	NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9
hg18_v1_chr1_-_93030538_93030548	0.142926	AAUACUG	AB449875|EVI5|7813|ecotropic viral integration site 5	AF008915|EVI5|7813|ecotropic viral integration site 5	NM_005665|EVI5|7813|ecotropic viral integration site 5
hg18_v1_chr12_+_119632213_119632213	0.142471	AAUACUG	NM_001080533|UNC119B|84747|unc-119 homolog B (C. elegans)
hg18_v1_chrX_+_100361588_100361750	0.142441	AAUACUG	NM_001171184|DRP2|1821|dystrophin related protein 2	NM_001939|DRP2|1821|dystrophin related protein 2	AB209305|DRP2|1821|dystrophin related protein 2	BC036095|DRP2|1821|dystrophin related protein 2	U43519|DRP2|1821|dystrophin related protein 2	AK289825|DRP2|1821|dystrophin related protein 2	AK295843|DRP2|1821|dystrophin related protein 2	BC111695|DRP2|1821|dystrophin related protein 2
hg18_v1_chr4_-_139382672_139382956	0.142318	AAUACUG	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr2_+_85051687_85051903	0.142113	AAUACUG	NM_020122|KCMF1|56888|potassium channel modulatory factor 1
hg18_v1_chr1_-_109742020_109742162	0.140961	AAUACUG	DQ896793|SORT1|6272|sortilin 1	AK293118|SORT1|6272|sortilin 1	BC023542|SORT1|6272|sortilin 1	NM_002959|SORT1|6272|sortilin 1
hg18_v1_chrX_+_149612488_149612670	0.140878	AAUACUG	BC032947|MTMR1|8776|myotubularin related protein 1	NM_003828|MTMR1|8776|myotubularin related protein 1	AK226109|MTMR1|8776|myotubularin related protein 1	AF057354|MTMR1|8776|myotubularin related protein 1	AJ224979|MTMR1|8776|myotubularin related protein 1
hg18_v1_chr6_-_30763057_30763079	0.140769	AAUACUG	AB075829|KIAA1949|170954|KIAA1949	NM_001134870|KIAA1949|170954|KIAA1949	AK125639|KIAA1949|170954|KIAA1949
hg18_v1_chr16_+_1299637_1299649	0.140355	AAUACUG	AK291118|UBE2I|7329|ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	NM_003345|UBE2I|7329|ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	NM_194259|UBE2I|7329|ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)
hg18_v1_chr17_-_57295451_57295701	0.140341	AAUACUG	BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1	BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1	AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1	NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1
hg18_v1_chr2_+_28828112_28828244	0.138411	AAUACUG	AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR601128|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme
hg18_v1_chr13_+_30672087_30672119	0.13773	AAUACUG	NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr17_+_61729306_61729472	0.137098	AAUACUG	NM_002737|PRKCA|5578|protein kinase C, alpha	X52479|PRKCA|5578|protein kinase C, alpha	BC109273|PRKCA|5578|protein kinase C, alpha	BC109274|PRKCA|5578|protein kinase C, alpha	AY633609|PRKCA|5578|protein kinase C, alpha	EU832768|PRKCA|5578|protein kinase C, alpha	GQ129311|PRKCA|5578|protein kinase C, alpha	AB451258|PRKCA|5578|protein kinase C, alpha	AB451383|PRKCA|5578|protein kinase C, alpha	AB209475|PRKCA|5578|protein kinase C, alpha	M22199|PRKCA|5578|protein kinase C, alpha
hg18_v1_chr20_+_30813851_30813855	0.13667	AAUACUG	AF331857|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	DQ321787|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_006892|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175848|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175849|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg18_v1_chr8_-_103737058_103737158	0.136653	AAUACUG	AK312894|KLF10|7071|Kruppel-like factor 10	U21847|KLF10|7071|Kruppel-like factor 10	BC095399|KLF10|7071|Kruppel-like factor 10	NM_005655|KLF10|7071|Kruppel-like factor 10
hg18_v1_chr16_-_19803606_19803725	0.136629	AAUACUG	AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B
hg18_v1_chr11_-_119104463_119104722	0.135539	AAUACUG	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg18_v1_chr5_-_95323353_95323530	0.135137	AAUACUG	BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2	NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2
hg18_v1_chr11_+_117982422_117982422	0.134499	AAUACUG	AB094090|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_015157|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg18_v1_chr11_+_106967017_106967026	0.134439	AAUACUG	AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1
hg18_v1_chr1_+_52964609_52964804	0.133971	AAUACUG	AK296460|ZYG11B|79699|zyg-11 homolog B (C. elegans)	NM_024646|ZYG11B|79699|zyg-11 homolog B (C. elegans)	AB051517|ZYG11B|79699|zyg-11 homolog B (C. elegans)
hg18_v1_chr14_-_19843969_19843994	0.133617	AAUACUG	AK074553|TTC5|91875|tetratricopeptide repeat domain 5	NM_138376|TTC5|91875|tetratricopeptide repeat domain 5
hg18_v1_chr5_+_122875691_122875872	0.131825	AAUACUG	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3	NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3	NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3	NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3	AK299739|CSNK1G3|1456|casein kinase 1, gamma 3	AK316019|CSNK1G3|1456|casein kinase 1, gamma 3
hg18_v1_chr3_+_2908920_2908920	0.131688	AAUACUG	AK057278|CNTN4|152330|contactin 4	AK314396|CNTN4|152330|contactin 4	BC026119|CNTN4|152330|contactin 4	NM_175613|CNTN4|152330|contactin 4
hg18_v1_chr11_-_62070867_62070913	0.130552	AAUACUG	AK300376|AHNAK|79026|AHNAK nucleoprotein	BC128460|AHNAK|79026|AHNAK nucleoprotein	NM_001620|AHNAK|79026|AHNAK nucleoprotein	NM_024060|AHNAK|79026|AHNAK nucleoprotein
hg18_v1_chr7_-_27149750_27149811	0.12889	AAUACUG	BT009744|HOXA5|3202|homeobox A5	CR542256|HOXA5|3202|homeobox A5	CR542277|HOXA5|3202|homeobox A5	DQ890593|HOXA5|3202|homeobox A5	DQ893761|HOXA5|3202|homeobox A5	BC013682|HOXA5|3202|homeobox A5	NM_019102|HOXA5|3202|homeobox A5
hg18_v1_chr11_-_118433082_118433158	0.127515	AAUACUG	BC004560|HYOU1|10525|hypoxia up-regulated 1	AK299648|HYOU1|10525|hypoxia up-regulated 1	AK307624|HYOU1|10525|hypoxia up-regulated 1	NM_006389|HYOU1|10525|hypoxia up-regulated 1	NM_001130991|HYOU1|10525|hypoxia up-regulated 1
hg18_v1_chr3_-_57088332_57088375	0.127239	AAUACUG	AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr1_-_159325977_159326008	0.127068	AAUACUG	NM_030916|PVRL4|81607|poliovirus receptor-related 4
hg18_v1_chr3_+_153499883_153499883	0.126695	AAUACUG	NM_207293|MBNL1|4154|muscleblind-like (Drosophila)	NM_207294|MBNL1|4154|muscleblind-like (Drosophila)	NM_207295|MBNL1|4154|muscleblind-like (Drosophila)	NM_207296|MBNL1|4154|muscleblind-like (Drosophila)	NM_207297|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr19_-_18493886_18493969	0.126596	AAUACUG	BC049195|ELL|8178|elongation factor RNA polymerase II	NM_006532|ELL|8178|elongation factor RNA polymerase II
hg18_v1_chr3_+_4510030_4510033	0.12609	AAUACUG	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr2_+_48610796_48610862	0.125901	AAUACUG	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg18_v1_chr5_+_77692094_77692251	0.123359	AAUACUG	NM_004866|SCAMP1|9522|secretory carrier membrane protein 1	CR624486|SCAMP1|9522|secretory carrier membrane protein 1	AF038966|SCAMP1|9522|secretory carrier membrane protein 1	AK304452|SCAMP1|9522|secretory carrier membrane protein 1	AK225172|SCAMP1|9522|secretory carrier membrane protein 1	BC009787|SCAMP1|9522|secretory carrier membrane protein 1	BC015065|SCAMP1|9522|secretory carrier membrane protein 1	AK298146|SCAMP1|9522|secretory carrier membrane protein 1	BC034048|SCAMP1|9522|secretory carrier membrane protein 1	AK290225|SCAMP1|9522|secretory carrier membrane protein 1	CR542286|SCAMP1|9522|secretory carrier membrane protein 1
hg18_v1_chr5_-_179651664_179651701	0.123141	AAUACUG	NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9	NM_002752|MAPK9|5601|mitogen-activated protein kinase 9	NM_139068|MAPK9|5601|mitogen-activated protein kinase 9	NM_139069|MAPK9|5601|mitogen-activated protein kinase 9	NM_139070|MAPK9|5601|mitogen-activated protein kinase 9
hg18_v1_chr2_-_46996454_46996531	0.121532	AAUACUG	NM_001171506|MCFD2|90411|multiple coagulation factor deficiency 2	NM_001171509|MCFD2|90411|multiple coagulation factor deficiency 2	NM_139279|MCFD2|90411|multiple coagulation factor deficiency 2
hg18_v1_chr17_-_46140015_46140270	0.121419	AAUACUG	AK314010|ANKRD40|91369|ankyrin repeat domain 40	CR627413|ANKRD40|91369|ankyrin repeat domain 40	CR616806|ANKRD40|91369|ankyrin repeat domain 40	BC012978|ANKRD40|91369|ankyrin repeat domain 40	EU164539|ANKRD40|91369|ankyrin repeat domain 40	NM_052855|ANKRD40|91369|ankyrin repeat domain 40
hg18_v1_chr2_+_208839195_208839287	0.119577	AAUACUG	AY457063|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC017736|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC032389|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	NM_001178000|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	NM_015040|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	NM_152671|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC125052|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC125053|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing
hg18_v1_chr16_+_30326077_30326235	0.119531	AAUACUG	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg18_v1_chr4_-_120768563_120768686	0.119135	AAUACUG	AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr9_-_97310651_97310759	0.118643	AAUACUG	NM_000264|PTCH1|5727|patched 1
hg18_v1_chr5_+_134012133_134012527	0.11861	AAUACUG	AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)	NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)	BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)
hg18_v1_chr7_-_99594211_99594260	0.118262	AAUACUG	BC015722|C7orf43|55262|chromosome 7 open reading frame 43	NM_018275|C7orf43|55262|chromosome 7 open reading frame 43	BC094727|C7orf43|55262|chromosome 7 open reading frame 43	AK310170|C7orf43|55262|chromosome 7 open reading frame 43
hg18_v1_chr3_-_195571748_195571764	0.118081	AAUACUG	BC101064|LRRC15|131578|leucine rich repeat containing 15	BC101065|LRRC15|131578|leucine rich repeat containing 15	AK125112|LRRC15|131578|leucine rich repeat containing 15	NM_001135057|LRRC15|131578|leucine rich repeat containing 15	NM_130830|LRRC15|131578|leucine rich repeat containing 15
hg18_v1_chr12_+_52060689_52060694	0.117822	AAUACUG	BC043224|SP1|6667|Sp1 transcription factor	NM_003109|SP1|6667|Sp1 transcription factor
hg18_v1_chr20_-_4938913_4938938	0.117327	AAUACUG	BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2
hg18_v1_chr10_-_101935777_101935807	0.11647	AAUACUG	AF064093|ERLIN1|10613|ER lipid raft associated 1	NM_001100626|ERLIN1|10613|ER lipid raft associated 1
hg18_v1_chrX_-_32340291_32340291	0.112578	AAUACUG	NM_004011|DMD|1756|dystrophin	NM_004012|DMD|1756|dystrophin
hg18_v1_chr9_-_97309507_97309535	0.111315	AAUACUG	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg18_v1_chr15_+_42506870_42506870	0.11084	AAUACUG	NM_016396|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg18_v1_chr2_-_131567458_131567478	0.110177	AAUACUG	BC066347|FAM168B|130074|family with sequence similarity 168, member B	BC110642|FAM168B|130074|family with sequence similarity 168, member B	NM_001009993|FAM168B|130074|family with sequence similarity 168, member B
hg18_v1_chr7_-_36396220_36396258	0.110109	AAUACUG	BC028678|KIAA0895|23366|KIAA0895	NM_001100425|KIAA0895|23366|KIAA0895
hg18_v1_chr13_-_40604587_40605003	0.109823	AAUACUG	AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6
hg18_v1_chr17_-_76064842_76065003	0.109227	AAUACUG	EU831771|NPTX1|4884|neuronal pentraxin I	EU831849|NPTX1|4884|neuronal pentraxin I	BC089441|NPTX1|4884|neuronal pentraxin I	U61849|NPTX1|4884|neuronal pentraxin I	AK127335|NPTX1|4884|neuronal pentraxin I	NM_002522|NPTX1|4884|neuronal pentraxin I
hg18_v1_chr3_-_137397344_137397399	0.108164	AAUACUG	AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)	NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)
hg18_v1_chr6_-_137155317_137155349	0.107985	AAUACUG	NM_005923|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	U67156|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	BC088829|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5
hg18_v1_chrX_+_49531209_49531209	0.106684	AAUACUG	NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked
hg18_v1_chr17_-_32840875_32841101	0.106551	AAUACUG	AK308905|ACACA|31|acetyl-CoA carboxylase alpha	AY315623|ACACA|31|acetyl-CoA carboxylase alpha	AY315625|ACACA|31|acetyl-CoA carboxylase alpha	AY315626|ACACA|31|acetyl-CoA carboxylase alpha	NM_198834|ACACA|31|acetyl-CoA carboxylase alpha	NM_198839|ACACA|31|acetyl-CoA carboxylase alpha
hg18_v1_chr11_+_696103_696235	0.10614	AAUACUG	NM_022772|EPS8L2|64787|EPS8-like 2	AK025588|EPS8L2|64787|EPS8-like 2	AK025824|EPS8L2|64787|EPS8-like 2	AK225311|EPS8L2|64787|EPS8-like 2	AK294041|EPS8L2|64787|EPS8-like 2	AK222903|EPS8L2|64787|EPS8-like 2
hg18_v1_chr7_-_98579617_98579753	0.105191	AAUACUG	AB046845|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	BC152468|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	NM_020429|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	NM_181349|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1
hg18_v1_chr11_+_94462585_94462735	0.105104	AAUACUG	AK291673|ENDOD1|23052|endonuclease domain containing 1	NM_015036|ENDOD1|23052|endonuclease domain containing 1	BC026191|ENDOD1|23052|endonuclease domain containing 1	AB020637|ENDOD1|23052|endonuclease domain containing 1	BC071171|ENDOD1|23052|endonuclease domain containing 1	CR609394|ENDOD1|23052|endonuclease domain containing 1
hg18_v1_chr2_-_25418249_25418358	0.104775	AAUACUG	AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	CR625891|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha
hg18_v1_chr6_-_53321706_53321901	0.104403	AAUACUG	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr3_-_178397706_178397801	0.104256	AAUACUG	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1
hg18_v1_chr2_+_39746141_39746141	0.103972	AAUACUG	NM_001167959|TMEM178|130733|transmembrane protein 178
hg18_v1_chr13_+_21143083_21143214	0.103585	AAUACUG	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg18_v1_chr1_-_114855281_114855321	0.103564	AAUACUG	AF119043|TRIM33|51592|tripartite motif containing 33	AF220136|TRIM33|51592|tripartite motif containing 33	AF220137|TRIM33|51592|tripartite motif containing 33	NM_015906|TRIM33|51592|tripartite motif containing 33	NM_033020|TRIM33|51592|tripartite motif containing 33
hg18_v1_chr12_-_95318338_95318558	0.10296	AAUACUG	AK290011|CDK17|5128|cyclin-dependent kinase 17	AK315214|CDK17|5128|cyclin-dependent kinase 17	NM_001170464|CDK17|5128|cyclin-dependent kinase 17	NM_002595|CDK17|5128|cyclin-dependent kinase 17
hg18_v1_chr15_+_73983250_73983359	0.102923	AAUACUG	BC020204|FBXO22|26263|F-box protein 22	NM_012170|FBXO22|26263|F-box protein 22	NM_147188|FBXO22|26263|F-box protein 22	AK307084|FBXO22|26263|F-box protein 22	AK024048|FBXO22|26263|F-box protein 22	CR618654|FBXO22|26263|F-box protein 22	BC041691|FBXO22|26263|F-box protein 22	AK223500|FBXO22|26263|F-box protein 22	BC039024|FBXO22|26263|F-box protein 22	CR608996|FBXO22|26263|F-box protein 22	AK294311|FBXO22|26263|F-box protein 22	CR609855|FBXO22|26263|F-box protein 22	BC032540|FBXO22|26263|F-box protein 22	AY005144|FBXO22|26263|F-box protein 22
hg18_v1_chr14_+_49157150_49157765	0.102773	AAUACUG	NM_002408|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	BC006390|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	BC018912|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK075199|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK056167|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK293231|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	DQ892713|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	DQ896859|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr14_+_35072998_35073123	0.102658	AAUACUG	AF260323|INSM2|84684|insulinoma-associated 2	NM_032594|INSM2|84684|insulinoma-associated 2	BC130377|INSM2|84684|insulinoma-associated 2	BC130379|INSM2|84684|insulinoma-associated 2	AB037912|INSM2|84684|insulinoma-associated 2	AK096639|INSM2|84684|insulinoma-associated 2
hg18_v1_chr5_+_71438796_71439275	0.101309	AAUACUG	BC017240|MAP1B|4131|microtubule-associated protein 1B	NM_005909|MAP1B|4131|microtubule-associated protein 1B	BC025240|MAP1B|4131|microtubule-associated protein 1B	BC139918|MAP1B|4131|microtubule-associated protein 1B	BC150196|MAP1B|4131|microtubule-associated protein 1B	BC046114|MAP1B|4131|microtubule-associated protein 1B	AK096273|MAP1B|4131|microtubule-associated protein 1B	AK308147|MAP1B|4131|microtubule-associated protein 1B	BX647077|MAP1B|4131|microtubule-associated protein 1B	BC039822|MAP1B|4131|microtubule-associated protein 1B	BC108733|MAP1B|4131|microtubule-associated protein 1B	BC032516|MAP1B|4131|microtubule-associated protein 1B	BC073993|MAP1B|4131|microtubule-associated protein 1B	BC056145|MAP1B|4131|microtubule-associated protein 1B	BC063669|MAP1B|4131|microtubule-associated protein 1B	BC094834|MAP1B|4131|microtubule-associated protein 1B
hg18_v1_chr4_-_184478920_184478920	0.101067	AAUACUG	NM_001111319|CLDN22|53842|claudin 22
hg18_v1_chr17_-_34209671_34209746	0.100813	AAUACUG	NM_003559|PIP4K2B|8396|phosphatidylinositol-5-phosphate 4-kinase, type II, beta	U85245|PIP4K2B|8396|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg18_v1_chr7_+_98994363_98994420	0.0993654	AAUACUG	NM_001009958|ZNF655|79027|zinc finger protein 655	NM_001009960|ZNF655|79027|zinc finger protein 655	NM_001085367|ZNF655|79027|zinc finger protein 655	NM_001085368|ZNF655|79027|zinc finger protein 655	AK027114|ZNF655|79027|zinc finger protein 655	AK316024|ZNF655|79027|zinc finger protein 655	BC037407|ZNF655|79027|zinc finger protein 655
hg18_v1_chr11_+_129444877_129444972	0.0993093	AAUACUG	NM_001142276|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001142277|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001142278|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001642|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr13_+_31787594_31787641	0.0986524	AAUACUG	NM_000059|BRCA2|675|breast cancer 2, early onset	U43746|BRCA2|675|breast cancer 2, early onset	BC026160|BRCA2|675|breast cancer 2, early onset	BC047568|BRCA2|675|breast cancer 2, early onset
hg18_v1_chr17_-_19711580_19711890	0.09847	AAUACUG	BC034988|ULK2|9706|unc-51-like kinase 2 (C. elegans)	AB014523|ULK2|9706|unc-51-like kinase 2 (C. elegans)	NM_001142610|ULK2|9706|unc-51-like kinase 2 (C. elegans)	NM_014683|ULK2|9706|unc-51-like kinase 2 (C. elegans)	BC039310|ULK2|9706|unc-51-like kinase 2 (C. elegans)
hg18_v1_chr16_+_1299180_1299180	0.0980048	AAUACUG	NM_194261|UBE2I|7329|ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)
hg18_v1_chr16_-_46957284_46957300	0.0971243	AAUACUG	NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg18_v1_chr9_-_15500899_15501022	0.0967676	AAUACUG	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg18_v1_chr7_+_130445394_130445394	0.0965072	AAUACUG	AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs
hg18_v1_chr6_+_131508153_131508164	0.0956304	AAUACUG	AF152929|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_016377|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chr13_-_50925275_50925412	0.0956184	AAUACUG	NM_001039937|INTS6|26512|integrator complex subunit 6	NM_001039938|INTS6|26512|integrator complex subunit 6	NM_012141|INTS6|26512|integrator complex subunit 6	AL833524|INTS6|26512|integrator complex subunit 6
hg18_v1_chr6_+_135544138_135544145	0.0949412	AAUACUG	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr6_-_80303822_80303874	0.0935067	AAUACUG	AK299314|LCA5|167691|Leber congenital amaurosis 5	BX648161|LCA5|167691|Leber congenital amaurosis 5	BC050327|LCA5|167691|Leber congenital amaurosis 5	NM_001122769|LCA5|167691|Leber congenital amaurosis 5	NM_181714|LCA5|167691|Leber congenital amaurosis 5
hg18_v1_chr14_+_36736867_36736871	0.092989	AAUACUG	NM_001195296|MIPOL1|145282|mirror-image polydactyly 1	NM_001195297|MIPOL1|145282|mirror-image polydactyly 1	NM_138731|MIPOL1|145282|mirror-image polydactyly 1
hg18_v1_chr2_-_233349469_233349518	0.0925205	AAUACUG	AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13
hg18_v1_chr11_+_34599163_34599215	0.0924638	AAUACUG	NM_012153|EHF|26298|ets homologous factor
hg18_v1_chr11_-_73787065_73787212	0.0904854	AAUACUG	AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1	AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1	BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1	NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1	CR606675|PGM2L1|283209|phosphoglucomutase 2-like 1
hg18_v1_chr6_-_110607857_110607899	0.090281	AAUACUG	NM_001024934|WASF1|8936|WAS protein family, member 1	NM_001024935|WASF1|8936|WAS protein family, member 1	NM_001024936|WASF1|8936|WAS protein family, member 1	NM_003931|WASF1|8936|WAS protein family, member 1
hg18_v1_chr3_+_106568334_106568402	0.0899175	AAUACUG	NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule
hg18_v1_chr7_+_77004686_77004799	0.0898503	AAUACUG	NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr1_-_152162074_152162076	0.0889974	AAUACUG	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chrX_-_138742050_138742112	0.0887623	AAUACUG	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg18_v1_chr8_+_41467283_41467329	0.0872378	AAUACUG	AF068291|GOLGA7|51125|golgin A7	BC012032|GOLGA7|51125|golgin A7	NM_001002296|GOLGA7|51125|golgin A7
hg18_v1_chr4_+_156808261_156808274	0.0869777	AAUACUG	NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3	BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3
hg18_v1_chr13_+_96672541_96672651	0.0869274	AAUACUG	NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)	NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)	AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)	AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)	AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)	BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)	AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg18_v1_chr18_-_44723116_44723174	0.086479	AAUACUG	AK131394|SMAD7|4092|SMAD family member 7	NM_001190823|SMAD7|4092|SMAD family member 7
hg18_v1_chr1_+_28159068_28159142	0.0864215	AAUACUG	AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8
hg18_v1_chr4_-_186969041_186969041	0.0864036	AAUACUG	AK293400|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145672|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr4_-_186934059_186934059	0.0861962	AAUACUG	AK225812|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145673|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr12_-_52306348_52306493	0.0860802	AAUACUG	BC136302|ATF7|11016|activating transcription factor 7	X52943|ATF7|11016|activating transcription factor 7	AK298853|ATF7|11016|activating transcription factor 7	AK313507|ATF7|11016|activating transcription factor 7	BC032433|ATF7|11016|activating transcription factor 7	BC140006|ATF7|11016|activating transcription factor 7	NM_001130060|ATF7|11016|activating transcription factor 7	NM_006856|ATF7|11016|activating transcription factor 7
hg18_v1_chr1_+_228269551_228269580	0.085336	AAUACUG	BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)	NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)
hg18_v1_chr9_+_115023628_115023683	0.0848392	AAUACUG	CR605076|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	NM_001859|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	CR593760|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	U83460|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	AK292511|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1
hg18_v1_chrX_-_48653852_48653895	0.0838975	AAUACUG	CR596762|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2	AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2
hg18_v1_chrX_-_131179598_131179884	0.082788	AAUACUG	BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family	AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family	NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family
hg18_v1_chr12_+_122762802_122762826	0.082706	AAUACUG	BC068531|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2	NM_012463|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2
hg18_v1_chr12_-_121473036_121473345	0.0823061	AAUACUG	X64838|CLIP1|6249|CAP-GLY domain containing linker protein 1	M97501|CLIP1|6249|CAP-GLY domain containing linker protein 1	NM_002956|CLIP1|6249|CAP-GLY domain containing linker protein 1	NM_198240|CLIP1|6249|CAP-GLY domain containing linker protein 1
hg18_v1_chr16_+_65143948_65143978	0.0822792	AAUACUG	NM_001040138|CKLF|51192|chemokine-like factor	AF151058|CKLF|51192|chemokine-like factor	AF096895|CKLF|51192|chemokine-like factor	AF135380|CKLF|51192|chemokine-like factor	AF135381|CKLF|51192|chemokine-like factor	AF145216|CKLF|51192|chemokine-like factor	NM_016326|CKLF|51192|chemokine-like factor	NM_016951|CKLF|51192|chemokine-like factor	NM_181640|CKLF|51192|chemokine-like factor	NM_181641|CKLF|51192|chemokine-like factor	AK301240|CKLF|51192|chemokine-like factor
hg18_v1_chr16_-_63713382_63713425	0.0800676	AAUACUG	D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)
hg18_v1_chr3_+_108724472_108724606	0.0797623	AAUACUG	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)	NM_020235|BBX|56987|bobby sox homolog (Drosophila)	AF283775|BBX|56987|bobby sox homolog (Drosophila)	AF454941|BBX|56987|bobby sox homolog (Drosophila)	AF161457|BBX|56987|bobby sox homolog (Drosophila)	AK314434|BBX|56987|bobby sox homolog (Drosophila)	AK057010|BBX|56987|bobby sox homolog (Drosophila)	AK291757|BBX|56987|bobby sox homolog (Drosophila)	AF276949|BBX|56987|bobby sox homolog (Drosophila)	BC131718|BBX|56987|bobby sox homolog (Drosophila)
hg18_v1_chrX_-_41667174_41667365	0.0797373	AAUACUG	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg18_v1_chr14_+_59020894_59021067	0.0785755	AAUACUG	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR605227|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR615396|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR596184|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR594163|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR612457|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg18_v1_chr1_+_114273518_114273520	0.0775243	AAUACUG	BC033012|HIPK1|204851|homeodomain interacting protein kinase 1	NM_152696|HIPK1|204851|homeodomain interacting protein kinase 1	NM_198268|HIPK1|204851|homeodomain interacting protein kinase 1	AK122662|HIPK1|204851|homeodomain interacting protein kinase 1
hg18_v1_chr12_+_67290881_67290945	0.0756512	AAUACUG	NM_001010942|RAP1B|5908|RAP1B, member of RAS oncogene family	NM_015646|RAP1B|5908|RAP1B, member of RAS oncogene family
hg18_v1_chr12_+_95112131_95112384	0.0754162	AAUACUG	NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)	Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)	AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)
hg18_v1_chr10_+_96152175_96152177	0.0753681	AAUACUG	NM_015188|TBC1D12|23232|TBC1 domain family, member 12
hg18_v1_chr3_-_64648370_64648404	0.0753114	AAUACUG	AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9
hg18_v1_chr16_-_3870121_3870121	0.0752344	AAUACUG	AB210043|CREBBP|1387|CREB binding protein	NM_001079846|CREBBP|1387|CREB binding protein	NM_004380|CREBBP|1387|CREB binding protein
hg18_v1_chr11_-_46569489_46569548	0.075091	AAUACUG	BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1	NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1	AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr14_+_61298815_61298929	0.0748057	AAUACUG	AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	CR592749|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	CR614677|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	CR625836|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	CR626257|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa
hg18_v1_chr15_+_83724743_83725047	0.0743301	AAUACUG	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13	BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13	NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13	AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13
hg18_v1_chr18_-_27518392_27518683	0.0740616	AAUACUG	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg18_v1_chr11_-_101828563_101829084	0.0738861	AAUACUG	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr3_-_151171190_151171444	0.0737897	AAUACUG	CR615830|PFN2|5217|profilin 2	CR626138|PFN2|5217|profilin 2	AF228738|PFN2|5217|profilin 2	EU832616|PFN2|5217|profilin 2	EU832688|PFN2|5217|profilin 2	AK311782|PFN2|5217|profilin 2	CR600596|PFN2|5217|profilin 2	CR609496|PFN2|5217|profilin 2	L10678|PFN2|5217|profilin 2	BC002964|PFN2|5217|profilin 2	CR625431|PFN2|5217|profilin 2	CR621836|PFN2|5217|profilin 2	CR594372|PFN2|5217|profilin 2	CR596808|PFN2|5217|profilin 2	CR598650|PFN2|5217|profilin 2	CR598653|PFN2|5217|profilin 2	CR598518|PFN2|5217|profilin 2	CR618131|PFN2|5217|profilin 2	BC095444|PFN2|5217|profilin 2	AK307227|PFN2|5217|profilin 2	AK311780|PFN2|5217|profilin 2	CR591423|PFN2|5217|profilin 2	CR606080|PFN2|5217|profilin 2	CR619503|PFN2|5217|profilin 2	BC018049|PFN2|5217|profilin 2	AK297915|PFN2|5217|profilin 2	CR601974|PFN2|5217|profilin 2	NM_002628|PFN2|5217|profilin 2	NM_053024|PFN2|5217|profilin 2
hg18_v1_chr1_-_171442937_171443093	0.0727563	AAUACUG	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg18_v1_chr13_-_102249263_102249404	0.0714572	AAUACUG	CR625522|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	BC051860|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	CR609732|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	AY358959|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	AK074974|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	AK222567|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	AK225103|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	AK309238|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	BC001297|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1	NM_024089|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1
hg18_v1_chr7_+_129918408_129918408	0.0714347	AAUACUG	NM_177525|MEST|4232|mesoderm specific transcript homolog (mouse)
hg18_v1_chr15_+_71522551_71522574	0.0709584	AAUACUG	NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60	AK131030|C15orf60|283677|chromosome 15 open reading frame 60	BC055412|C15orf60|283677|chromosome 15 open reading frame 60
hg18_v1_chr17_-_74289901_74289995	0.0705805	AAUACUG	EU832306|CYTH1|9267|cytohesin 1	EU832390|CYTH1|9267|cytohesin 1	BC050452|CYTH1|9267|cytohesin 1	BC038385|CYTH1|9267|cytohesin 1	AK296914|CYTH1|9267|cytohesin 1	AK307917|CYTH1|9267|cytohesin 1	M85169|CYTH1|9267|cytohesin 1	NM_004762|CYTH1|9267|cytohesin 1	NM_017456|CYTH1|9267|cytohesin 1
hg18_v1_chr17_-_18526296_18526296	0.0701828	AAUACUG	NM_001145045|ZNF286B|729288|zinc finger protein 286B
hg18_v1_chr1_+_200584421_200584571	0.0696262	AAUACUG	AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B
hg18_v1_chr8_-_58068977_58068984	0.0695765	AAUACUG	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1	NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1
hg18_v1_chr17_-_78199384_78199760	0.069464	AAUACUG	AK297477|WDR45L|56270|WDR45-like	BC000974|WDR45L|56270|WDR45-like	AM182326|WDR45L|56270|WDR45-like	BC007838|WDR45L|56270|WDR45-like	CR593190|WDR45L|56270|WDR45-like	NM_019613|WDR45L|56270|WDR45-like
hg18_v1_chr15_+_40353657_40353969	0.0694197	AAUACUG	NM_198141|GANC|2595|glucosidase, alpha; neutral C	AK301467|GANC|2595|glucosidase, alpha; neutral C	AK074037|GANC|2595|glucosidase, alpha; neutral C	BC059406|GANC|2595|glucosidase, alpha; neutral C	BC093833|GANC|2595|glucosidase, alpha; neutral C	BC112051|GANC|2595|glucosidase, alpha; neutral C	AF545045|GANC|2595|glucosidase, alpha; neutral C	AF545046|GANC|2595|glucosidase, alpha; neutral C	AM392591|GANC|2595|glucosidase, alpha; neutral C	AM393467|GANC|2595|glucosidase, alpha; neutral C	BC151223|GANC|2595|glucosidase, alpha; neutral C
hg18_v1_chr1_+_50344550_50344550	0.0691385	AAUACUG	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr12_+_1670449_1670507	0.0687868	AAUACUG	AK128511|ADIPOR2|79602|adiponectin receptor 2	BC051858|ADIPOR2|79602|adiponectin receptor 2	NM_024551|ADIPOR2|79602|adiponectin receptor 2
hg18_v1_chr1_+_50342168_50342168	0.0687594	AAUACUG	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr7_-_72771853_72772026	0.0685504	AAUACUG	AB086954|STX1A|6804|syntaxin 1A (brain)	CR457018|STX1A|6804|syntaxin 1A (brain)	D37932|STX1A|6804|syntaxin 1A (brain)	GQ129291|STX1A|6804|syntaxin 1A (brain)	GQ129292|STX1A|6804|syntaxin 1A (brain)	L37792|STX1A|6804|syntaxin 1A (brain)	AK313980|STX1A|6804|syntaxin 1A (brain)	BC064644|STX1A|6804|syntaxin 1A (brain)	BC000444|STX1A|6804|syntaxin 1A (brain)	BC003011|STX1A|6804|syntaxin 1A (brain)	AK299959|STX1A|6804|syntaxin 1A (brain)	NM_001165903|STX1A|6804|syntaxin 1A (brain)	NM_004603|STX1A|6804|syntaxin 1A (brain)
hg18_v1_chr3_+_102775716_102775774	0.0681457	AAUACUG	BC013916|PCNP|57092|PEST proteolytic signal containing nuclear protein	CR610067|PCNP|57092|PEST proteolytic signal containing nuclear protein	CR627371|PCNP|57092|PEST proteolytic signal containing nuclear protein	BC022001|PCNP|57092|PEST proteolytic signal containing nuclear protein	AB037675|PCNP|57092|PEST proteolytic signal containing nuclear protein	NM_020357|PCNP|57092|PEST proteolytic signal containing nuclear protein	AK025551|PCNP|57092|PEST proteolytic signal containing nuclear protein	AK222978|PCNP|57092|PEST proteolytic signal containing nuclear protein	BC107796|PCNP|57092|PEST proteolytic signal containing nuclear protein	AK314629|PCNP|57092|PEST proteolytic signal containing nuclear protein	DQ890799|PCNP|57092|PEST proteolytic signal containing nuclear protein	DQ893953|PCNP|57092|PEST proteolytic signal containing nuclear protein
hg18_v1_chr1_-_37928691_37928845	0.067929	AAUACUG	AK316093|C1orf109|54955|chromosome 1 open reading frame 109	AK299377|C1orf109|54955|chromosome 1 open reading frame 109	BC063843|C1orf109|54955|chromosome 1 open reading frame 109	AK000515|C1orf109|54955|chromosome 1 open reading frame 109	NM_017850|C1orf109|54955|chromosome 1 open reading frame 109
hg18_v1_chr16_+_15950707_15951024	0.0678442	AAUACUG	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg18_v1_chr1_+_50347176_50347181	0.0677196	AAUACUG	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr21_+_39099717_39099777	0.0674733	AAUACUG	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr3_-_87122936_87122946	0.0671692	AAUACUG	CR605157|VGLL3|389136|vestigial like 3 (Drosophila)	CR600157|VGLL3|389136|vestigial like 3 (Drosophila)	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr16_+_22124870_22125478	0.0669769	AAUACUG	NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase	AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase	BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase
hg18_v1_chr2_+_99320181_99320449	0.0666809	AAUACUG	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr13_-_32658215_32658215	0.0663859	AAUACUG	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr1_-_100487976_100487998	0.066135	AAUACUG	AK303941|DBT|1629|dihydrolipoamide branched chain transacylase E2	AK313191|DBT|1629|dihydrolipoamide branched chain transacylase E2	X66785|DBT|1629|dihydrolipoamide branched chain transacylase E2	NM_001918|DBT|1629|dihydrolipoamide branched chain transacylase E2
hg18_v1_chr12_+_13240868_13240943	0.0657399	AAUACUG	NM_001423|EMP1|2012|epithelial membrane protein 1	U77085|EMP1|2012|epithelial membrane protein 1	AK310798|EMP1|2012|epithelial membrane protein 1	AK308505|EMP1|2012|epithelial membrane protein 1	BC047300|EMP1|2012|epithelial membrane protein 1
hg18_v1_chr17_+_27493486_27493597	0.0656378	AAUACUG	BC060781|RHOT1|55288|ras homolog gene family, member T1	NM_001033566|RHOT1|55288|ras homolog gene family, member T1	NM_001033568|RHOT1|55288|ras homolog gene family, member T1	NM_018307|RHOT1|55288|ras homolog gene family, member T1	AJ496730|RHOT1|55288|ras homolog gene family, member T1
hg18_v1_chr6_+_30796123_30796283	0.0641922	AAUACUG	CR611118|TUBB|203068|tubulin, beta	CR619520|TUBB|203068|tubulin, beta	CR598285|TUBB|203068|tubulin, beta	CR600934|TUBB|203068|tubulin, beta	CR601607|TUBB|203068|tubulin, beta	CR604162|TUBB|203068|tubulin, beta	CR607031|TUBB|203068|tubulin, beta	CR611872|TUBB|203068|tubulin, beta	CR612751|TUBB|203068|tubulin, beta	CR613221|TUBB|203068|tubulin, beta	BC002347|TUBB|203068|tubulin, beta	BC007605|TUBB|203068|tubulin, beta	CR592478|TUBB|203068|tubulin, beta	CR596484|TUBB|203068|tubulin, beta	CR601013|TUBB|203068|tubulin, beta	CR604556|TUBB|203068|tubulin, beta	CR604712|TUBB|203068|tubulin, beta	CR605680|TUBB|203068|tubulin, beta	CR608598|TUBB|203068|tubulin, beta	CR608834|TUBB|203068|tubulin, beta	CR613167|TUBB|203068|tubulin, beta	CR615486|TUBB|203068|tubulin, beta	CR617111|TUBB|203068|tubulin, beta	CR621812|TUBB|203068|tubulin, beta	CR626833|TUBB|203068|tubulin, beta	CR603160|TUBB|203068|tubulin, beta	CR607608|TUBB|203068|tubulin, beta	CR620946|TUBB|203068|tubulin, beta	AB062393|TUBB|203068|tubulin, beta	CR604797|TUBB|203068|tubulin, beta	CR608670|TUBB|203068|tubulin, beta	CR610589|TUBB|203068|tubulin, beta	CR612988|TUBB|203068|tubulin, beta	CR615095|TUBB|203068|tubulin, beta	CR616894|TUBB|203068|tubulin, beta	CR617779|TUBB|203068|tubulin, beta	CR623850|TUBB|203068|tubulin, beta	BC001938|TUBB|203068|tubulin, beta	BC005838|TUBB|203068|tubulin, beta	CR594368|TUBB|203068|tubulin, beta	CR595266|TUBB|203068|tubulin, beta	CR595417|TUBB|203068|tubulin, beta	CR599452|TUBB|203068|tubulin, beta	CR601344|TUBB|203068|tubulin, beta	CR602045|TUBB|203068|tubulin, beta	CR619202|TUBB|203068|tubulin, beta	CR620593|TUBB|203068|tubulin, beta	CR620764|TUBB|203068|tubulin, beta	CR591865|TUBB|203068|tubulin, beta	CR620650|TUBB|203068|tubulin, beta	CR625193|TUBB|203068|tubulin, beta	CR605815|TUBB|203068|tubulin, beta	AF070561|TUBB|203068|tubulin, beta	AF070593|TUBB|203068|tubulin, beta	BC013374|TUBB|203068|tubulin, beta	NM_178014|TUBB|203068|tubulin, beta	BC021909|TUBB|203068|tubulin, beta	BC019924|TUBB|203068|tubulin, beta	BC062532|TUBB|203068|tubulin, beta	CR591614|TUBB|203068|tubulin, beta	CR601589|TUBB|203068|tubulin, beta	CR612875|TUBB|203068|tubulin, beta	CR618338|TUBB|203068|tubulin, beta	CR626769|TUBB|203068|tubulin, beta	CR592844|TUBB|203068|tubulin, beta	CR593906|TUBB|203068|tubulin, beta	CR604912|TUBB|203068|tubulin, beta	CR611048|TUBB|203068|tubulin, beta	CR594478|TUBB|203068|tubulin, beta	CR590449|TUBB|203068|tubulin, beta	CR615318|TUBB|203068|tubulin, beta	CR606296|TUBB|203068|tubulin, beta	CR613923|TUBB|203068|tubulin, beta	CR615817|TUBB|203068|tubulin, beta	CR605898|TUBB|203068|tubulin, beta	CR595241|TUBB|203068|tubulin, beta	CR611874|TUBB|203068|tubulin, beta	CR624717|TUBB|203068|tubulin, beta	CR613213|TUBB|203068|tubulin, beta	AK297489|TUBB|203068|tubulin, beta	CR600973|TUBB|203068|tubulin, beta	DQ891742|TUBB|203068|tubulin, beta	DQ891828|TUBB|203068|tubulin, beta	DQ894920|TUBB|203068|tubulin, beta	CR596111|TUBB|203068|tubulin, beta	V00599|TUBB|203068|tubulin, beta
hg18_v1_chr16_-_46976649_46976858	0.0636288	AAUACUG	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg18_v1_chr5_+_36912595_36912648	0.0629947	AAUACUG	NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)	NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr21_+_36614347_36614432	0.0629037	AAUACUG	BC058002|MORC3|23515|MORC family CW-type zinc finger 3	NM_015358|MORC3|23515|MORC family CW-type zinc finger 3	AK295133|MORC3|23515|MORC family CW-type zinc finger 3	BC007311|MORC3|23515|MORC family CW-type zinc finger 3	D50926|MORC3|23515|MORC family CW-type zinc finger 3	BC094779|MORC3|23515|MORC family CW-type zinc finger 3	BC132731|MORC3|23515|MORC family CW-type zinc finger 3	BC144116|MORC3|23515|MORC family CW-type zinc finger 3	AK292957|MORC3|23515|MORC family CW-type zinc finger 3
hg18_v1_chr5_-_32480586_32480801	0.0622196	AAUACUG	AK292214|ZFR|51663|zinc finger RNA binding protein	AK309638|ZFR|51663|zinc finger RNA binding protein	BC017879|ZFR|51663|zinc finger RNA binding protein	NM_016107|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr6_-_53034547_53034642	0.0616876	AAUACUG	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase	NM_016513|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr8_-_82916982_82917075	0.0614076	AAUACUG	AL833763|SNX16|64089|sorting nexin 16	BC033630|SNX16|64089|sorting nexin 16	AK290903|SNX16|64089|sorting nexin 16	NM_022133|SNX16|64089|sorting nexin 16	NM_152836|SNX16|64089|sorting nexin 16	NM_152837|SNX16|64089|sorting nexin 16
hg18_v1_chr2_-_37047113_37047166	0.0602892	AAUACUG	BC106879|STRN|6801|striatin, calmodulin binding protein	AJ223814|STRN|6801|striatin, calmodulin binding protein	BC106878|STRN|6801|striatin, calmodulin binding protein	NM_003162|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr12_+_68150332_68150487	0.0602379	AAUACUG	NM_001042555|FRS2|10818|fibroblast growth factor receptor substrate 2	NM_006654|FRS2|10818|fibroblast growth factor receptor substrate 2	BC021562|FRS2|10818|fibroblast growth factor receptor substrate 2	AK312477|FRS2|10818|fibroblast growth factor receptor substrate 2
hg18_v1_chr9_-_122595475_122595560	0.0601265	AAUACUG	BC000239|FBXW2|26190|F-box and WD repeat domain containing 2	BC018738|FBXW2|26190|F-box and WD repeat domain containing 2	AK300066|FBXW2|26190|F-box and WD repeat domain containing 2	AK314385|FBXW2|26190|F-box and WD repeat domain containing 2	AK022484|FBXW2|26190|F-box and WD repeat domain containing 2	NM_012164|FBXW2|26190|F-box and WD repeat domain containing 2
hg18_v1_chr3_+_121944247_121944298	0.0599293	AAUACUG	NM_005513|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa	AK223401|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa	BC005917|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa	S67859|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa
hg18_v1_chr7_-_120285364_120285428	0.0593148	AAUACUG	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr6_+_96570565_96570612	0.0590944	AAUACUG	NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg18_v1_chr7_-_94123413_94123457	0.0590849	AAUACUG	AJ000534|SGCE|8910|sarcoglycan, epsilon	AK295021|SGCE|8910|sarcoglycan, epsilon	AK298220|SGCE|8910|sarcoglycan, epsilon	NM_001099400|SGCE|8910|sarcoglycan, epsilon	NM_001099401|SGCE|8910|sarcoglycan, epsilon	NM_003919|SGCE|8910|sarcoglycan, epsilon
hg18_v1_chr20_+_56659693_56659895	0.059082	AAUACUG	AK316547|STX16|8675|syntaxin 16	NM_001001433|STX16|8675|syntaxin 16	NM_001134772|STX16|8675|syntaxin 16	NM_001134773|STX16|8675|syntaxin 16	NM_003763|STX16|8675|syntaxin 16	AK304867|STX16|8675|syntaxin 16
hg18_v1_chr11_+_67984758_67984814	0.0583442	AAUACUG	NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	CR593310|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3
hg18_v1_chr8_+_28803804_28803869	0.0581927	AAUACUG	AK290683|HMBOX1|79618|homeobox containing 1	NM_001135726|HMBOX1|79618|homeobox containing 1	AK310959|HMBOX1|79618|homeobox containing 1
hg18_v1_chr2_+_190753833_190753938	0.0571056	AAUACUG	NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88	BC005083|C2orf88|84281|chromosome 2 open reading frame 88	NM_032321|C2orf88|84281|chromosome 2 open reading frame 88	AK313395|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr3_-_66633534_66633551	0.0568746	AAUACUG	AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1
hg18_v1_chr1_+_26310854_26310999	0.0563758	AAUACUG	AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like	NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like	AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like	BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like
hg18_v1_chr5_-_95184221_95184464	0.0563734	AAUACUG	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)	CR593859|GLRX|2745|glutaredoxin (thioltransferase)
hg18_v1_chr7_+_28692122_28692294	0.0563506	AAUACUG	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr12_-_7979896_7980171	0.0561509	AAUACUG	CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	CR621471|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3
hg18_v1_chr2_-_70329067_70329379	0.0556782	AAUACUG	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg18_v1_chr22_-_34566367_34566575	0.0549458	AAUACUG	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CR600481|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr21_+_44256630_44256907	0.0547007	AAUACUG	BC071569|TRAPPC10|7109|trafficking protein particle complex 10	NM_003274|TRAPPC10|7109|trafficking protein particle complex 10	U61500|TRAPPC10|7109|trafficking protein particle complex 10	BC046241|TRAPPC10|7109|trafficking protein particle complex 10	BC052247|TRAPPC10|7109|trafficking protein particle complex 10	BC094823|TRAPPC10|7109|trafficking protein particle complex 10	U19252|TRAPPC10|7109|trafficking protein particle complex 10	BC101728|TRAPPC10|7109|trafficking protein particle complex 10
hg18_v1_chr3_+_20056527_20056527	0.0541468	AAUACUG	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr22_-_30072217_30072314	0.0539094	AAUACUG	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr17_-_13445942_13445983	0.0537651	AAUACUG	AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
hg18_v1_chr16_-_55016872_55016977	0.0534198	AAUACUG	NM_001144|AMFR|267|autocrine motility factor receptor	BC069197|AMFR|267|autocrine motility factor receptor
hg18_v1_chr2_-_38457934_38457937	0.0533989	AAUACUG	NM_001135673|ATL2|64225|atlastin GTPase 2	NM_022374|ATL2|64225|atlastin GTPase 2
hg18_v1_chr1_-_51757582_51757642	0.0532473	AAUACUG	NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15	Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chrX_+_64804235_64804250	0.052892	AAUACUG	NM_002444|MSN|4478|moesin
hg18_v1_chr2_-_171999473_171999589	0.0525537	AAUACUG	AK292108|METTL8|79828|methyltransferase like 8	NM_024770|METTL8|79828|methyltransferase like 8	AK297141|METTL8|79828|methyltransferase like 8
hg18_v1_chr8_-_131021169_131021199	0.0520788	AAUACUG	CR594067|FAM49B|51571|family with sequence similarity 49, member B	CR616846|FAM49B|51571|family with sequence similarity 49, member B	BC017297|FAM49B|51571|family with sequence similarity 49, member B	NM_016623|FAM49B|51571|family with sequence similarity 49, member B	AK130372|FAM49B|51571|family with sequence similarity 49, member B	CR597917|FAM49B|51571|family with sequence similarity 49, member B
hg18_v1_chr15_+_94676691_94676797	0.0520563	AAUACUG	CR601286|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr17_-_62671767_62671782	0.0520064	AAUACUG	NM_014877|HELZ|9931|helicase with zinc finger
hg18_v1_chr4_-_186969202_186969218	0.0512614	AAUACUG	BC011883|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145671|SORBS2|8470|sorbin and SH3 domain containing 2
hg18_v1_chr8_+_124498145_124498269	0.0498943	AAUACUG	AK001066|WDYHV1|55093|WDYHV motif containing 1	NM_018024|WDYHV1|55093|WDYHV motif containing 1	AK225643|WDYHV1|55093|WDYHV motif containing 1	AK293492|WDYHV1|55093|WDYHV motif containing 1	BC008781|WDYHV1|55093|WDYHV motif containing 1
hg18_v1_chr1_-_238842071_238842084	0.0497394	AAUACUG	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg18_v1_chr22_-_49260136_49260372	0.0494886	AAUACUG	EU831421|SBF1|6305|SET binding factor 1	EU831514|SBF1|6305|SET binding factor 1	BC087612|SBF1|6305|SET binding factor 1	BC040031|SBF1|6305|SET binding factor 1	AK057985|SBF1|6305|SET binding factor 1	NM_002972|SBF1|6305|SET binding factor 1
hg18_v1_chr1_+_40399618_40399635	0.0491119	AAUACUG	BC113666|RLF|6018|rearranged L-myc fusion	NM_012421|RLF|6018|rearranged L-myc fusion
hg18_v1_chr4_-_122964428_122964555	0.0487672	AAUACUG	CR597266|CCNA2|890|cyclin A2	CR604810|CCNA2|890|cyclin A2	AK291931|CCNA2|890|cyclin A2	NM_001237|CCNA2|890|cyclin A2
hg18_v1_chr5_-_53642144_53642174	0.0482703	AAUACUG	AK000058|ARL15|54622|ADP-ribosylation factor-like 15	AK290886|ARL15|54622|ADP-ribosylation factor-like 15	BC026093|ARL15|54622|ADP-ribosylation factor-like 15	NM_019087|ARL15|54622|ADP-ribosylation factor-like 15	AK311482|ARL15|54622|ADP-ribosylation factor-like 15
hg18_v1_chr14_+_68728235_68728304	0.0481051	AAUACUG	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr18_-_44731078_44731078	0.0480718	AAUACUG	AF010193|SMAD7|4092|SMAD family member 7	NM_001190821|SMAD7|4092|SMAD family member 7	NM_005904|SMAD7|4092|SMAD family member 7
hg18_v1_chr2_-_152393209_152393276	0.0480345	AAUACUG	CR599449|ARL5A|26225|ADP-ribosylation factor-like 5A	CR613929|ARL5A|26225|ADP-ribosylation factor-like 5A	CR607846|ARL5A|26225|ADP-ribosylation factor-like 5A	NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A	NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A	NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A
hg18_v1_chr8_+_97343334_97343443	0.047626	AAUACUG	BC004192|PTDSS1|9791|phosphatidylserine synthase 1	BC004390|PTDSS1|9791|phosphatidylserine synthase 1	CR594697|PTDSS1|9791|phosphatidylserine synthase 1	D14694|PTDSS1|9791|phosphatidylserine synthase 1	NM_014754|PTDSS1|9791|phosphatidylserine synthase 1	DQ891825|PTDSS1|9791|phosphatidylserine synthase 1	DQ895012|PTDSS1|9791|phosphatidylserine synthase 1
hg18_v1_chrX_-_110542040_110542115	0.0474917	AAUACUG	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg18_v1_chr3_-_88281705_88281724	0.047396	AAUACUG	NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1	BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1
hg18_v1_chr16_-_65838899_65838956	0.0473702	AAUACUG	AK301157|FHOD1|29109|formin homology 2 domain containing 1	NM_013241|FHOD1|29109|formin homology 2 domain containing 1
hg18_v1_chr11_-_95762632_95762749	0.0471581	AAUACUG	AF161533|CCDC82|79780|coiled-coil domain containing 82	AF245436|CCDC82|79780|coiled-coil domain containing 82	AK313893|CCDC82|79780|coiled-coil domain containing 82	AK056790|CCDC82|79780|coiled-coil domain containing 82	AK074306|CCDC82|79780|coiled-coil domain containing 82	NM_024725|CCDC82|79780|coiled-coil domain containing 82
hg18_v1_chr4_-_122213018_122213143	0.0470711	AAUACUG	BC019351|C4orf31|79625|chromosome 4 open reading frame 31	AK289615|C4orf31|79625|chromosome 4 open reading frame 31	NM_024574|C4orf31|79625|chromosome 4 open reading frame 31
hg18_v1_chr1_+_84316217_84316632	0.0467715	AAUACUG	AK074904|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	BC035058|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_002731|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_207578|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK314550|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	BC016285|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	M34181|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM392526|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM393233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM393317|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AM393497|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	EU832783|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	GQ129404|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB451239|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB451364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg18_v1_chr20_+_39199542_39199662	0.0458178	AAUACUG	NM_002660|PLCG1|5335|phospholipase C, gamma 1	NM_182811|PLCG1|5335|phospholipase C, gamma 1	BC136466|PLCG1|5335|phospholipase C, gamma 1	BC144136|PLCG1|5335|phospholipase C, gamma 1	M34667|PLCG1|5335|phospholipase C, gamma 1
hg18_v1_chr2_+_165804157_165804200	0.045755	AAUACUG	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr4_+_57028503_57028534	0.045221	AAUACUG	NM_006947|SRP72|6731|signal recognition particle 72kDa	BC017057|SRP72|6731|signal recognition particle 72kDa	BC056901|SRP72|6731|signal recognition particle 72kDa	BC105583|SRP72|6731|signal recognition particle 72kDa
hg18_v1_chr14_-_50068928_50069192	0.0448289	AAUACUG	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg18_v1_chr17_+_19221606_19221960	0.0436894	AAUACUG	NM_139032|MAPK7|5598|mitogen-activated protein kinase 7	NM_139033|MAPK7|5598|mitogen-activated protein kinase 7	BC007404|MAPK7|5598|mitogen-activated protein kinase 7	BC007992|MAPK7|5598|mitogen-activated protein kinase 7	U29725|MAPK7|5598|mitogen-activated protein kinase 7	AK295376|MAPK7|5598|mitogen-activated protein kinase 7
hg18_v1_chr3_-_193928038_193928081	0.043534	AAUACUG	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr7_+_98993956_98993980	0.0435008	AAUACUG	BC063478|ZNF655|79027|zinc finger protein 655	NM_001083956|ZNF655|79027|zinc finger protein 655	NM_001085366|ZNF655|79027|zinc finger protein 655	NM_024061|ZNF655|79027|zinc finger protein 655	NM_138494|ZNF655|79027|zinc finger protein 655
hg18_v1_chr5_-_37871685_37871685	0.0434546	AAUACUG	AJ001897|GDNF|2668|glial cell derived neurotrophic factor	AJ001898|GDNF|2668|glial cell derived neurotrophic factor	NM_001190468|GDNF|2668|glial cell derived neurotrophic factor	NM_001190469|GDNF|2668|glial cell derived neurotrophic factor
hg18_v1_chr2_+_114363919_114364115	0.0431857	AAUACUG	BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr7_+_89813913_89813968	0.0424227	AAUACUG	AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)	AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)	NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)	NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)	BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)	CR614815|GTPBP10|85865|GTP-binding protein 10 (putative)	CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)	AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)	BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)
hg18_v1_chr14_-_50367513_50367627	0.042078	AAUACUG	AB046785|NIN|51199|ninein (GSK3B interacting protein)	BC065521|NIN|51199|ninein (GSK3B interacting protein)	AF223937|NIN|51199|ninein (GSK3B interacting protein)	AF223938|NIN|51199|ninein (GSK3B interacting protein)	AF223939|NIN|51199|ninein (GSK3B interacting protein)	AF302773|NIN|51199|ninein (GSK3B interacting protein)	AY736182|NIN|51199|ninein (GSK3B interacting protein)	NM_016350|NIN|51199|ninein (GSK3B interacting protein)	NM_020921|NIN|51199|ninein (GSK3B interacting protein)	NM_182944|NIN|51199|ninein (GSK3B interacting protein)	NM_182946|NIN|51199|ninein (GSK3B interacting protein)
hg18_v1_chr10_+_126620681_126620681	0.0418211	AAUACUG	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chrX_-_19898302_19898302	0.0408516	AAUACUG	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg18_v1_chr8_-_17624304_17624363	0.0407522	AAUACUG	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr7_-_129379947_129380027	0.0402667	AAUACUG	BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)	NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)	NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)
hg18_v1_chr6_-_91063301_91063365	0.0399883	AAUACUG	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr2_+_105727836_105728114	0.0398733	AAUACUG	CR597804|NCK2|8440|NCK adaptor protein 2	NM_001004722|NCK2|8440|NCK adaptor protein 2	NM_003581|NCK2|8440|NCK adaptor protein 2
hg18_v1_chr14_-_103098326_103098411	0.0398237	AAUACUG	AK291312|BAG5|9529|BCL2-associated athanogene 5	AK225741|BAG5|9529|BCL2-associated athanogene 5	BC044216|BAG5|9529|BCL2-associated athanogene 5	AF095195|BAG5|9529|BCL2-associated athanogene 5	AK225730|BAG5|9529|BCL2-associated athanogene 5	BC050551|BAG5|9529|BCL2-associated athanogene 5	NM_001015049|BAG5|9529|BCL2-associated athanogene 5	NM_004873|BAG5|9529|BCL2-associated athanogene 5
hg18_v1_chr5_-_32348826_32348954	0.039609	AAUACUG	AK000483|MTMR12|54545|myotubularin related protein 12	NM_001040446|MTMR12|54545|myotubularin related protein 12
hg18_v1_chr8_+_107807415_107807647	0.0395831	AAUACUG	AK303695|OXR1|55074|oxidation resistance 1	NM_001198534|OXR1|55074|oxidation resistance 1	NM_001198535|OXR1|55074|oxidation resistance 1	AB075503|OXR1|55074|oxidation resistance 1	AK302844|OXR1|55074|oxidation resistance 1	CR596350|OXR1|55074|oxidation resistance 1	AK316153|OXR1|55074|oxidation resistance 1	FN650109|OXR1|55074|oxidation resistance 1
hg18_v1_chr3_+_162421792_162421838	0.0395717	AAUACUG	AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)	BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)	NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)	AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)	AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)
hg18_v1_chr14_+_101297887_101297992	0.0394587	AAUACUG	NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma
hg18_v1_chr18_+_17575542_17575542	0.0388671	AAUACUG	AY149908|MIB1|57534|mindbomb homolog 1 (Drosophila)	BC110581|MIB1|57534|mindbomb homolog 1 (Drosophila)	BC110582|MIB1|57534|mindbomb homolog 1 (Drosophila)	NM_020774|MIB1|57534|mindbomb homolog 1 (Drosophila)
hg18_v1_chrX_-_15530112_15530198	0.0387793	AAUACUG	AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
hg18_v1_chr14_+_68727946_68727967	0.0378303	AAUACUG	NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr10_+_18081223_18081232	0.0377408	AAUACUG	NM_001098844|FAM23A|653567|family with sequence similarity 23, member A	BC157856|FAM23A|653567|family with sequence similarity 23, member A
hg18_v1_chr2_+_165858586_165858586	0.0374273	AAUACUG	NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr3_-_15773061_15773101	0.0370771	AAUACUG	AY367056|ANKRD28|23243|ankyrin repeat domain 28	NM_001195099|ANKRD28|23243|ankyrin repeat domain 28	BC035170|ANKRD28|23243|ankyrin repeat domain 28	BC048975|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr12_+_75681973_75682014	0.0360942	AAUACUG	NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17	BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17
hg18_v1_chr8_+_92151599_92151781	0.0354945	AAUACUG	NM_016023|OTUD6B|51633|OTU domain containing 6B	BX647772|OTUD6B|51633|OTU domain containing 6B	AK293843|OTUD6B|51633|OTU domain containing 6B	BC029760|OTUD6B|51633|OTU domain containing 6B	AK310823|OTUD6B|51633|OTU domain containing 6B	AK291646|OTUD6B|51633|OTU domain containing 6B	AF151836|OTUD6B|51633|OTU domain containing 6B
hg18_v1_chr4_+_148621518_148621533	0.0346742	AAUACUG	NM_001166055|EDNRA|1909|endothelin receptor type A	NM_001957|EDNRA|1909|endothelin receptor type A	AK315931|EDNRA|1909|endothelin receptor type A
hg18_v1_chr3_-_180272291_180272349	0.0336075	AAUACUG	NM_022470|ZMAT3|64393|zinc finger, matrin-type 3	NM_152240|ZMAT3|64393|zinc finger, matrin-type 3
hg18_v1_chr1_-_201124848_201125007	0.033373	AAUACUG	BT007133|RABIF|5877|RAB interacting factor	U74324|RABIF|5877|RAB interacting factor	CR593497|RABIF|5877|RAB interacting factor	S78873|RABIF|5877|RAB interacting factor	BC018488|RABIF|5877|RAB interacting factor	BC037392|RABIF|5877|RAB interacting factor	NM_002871|RABIF|5877|RAB interacting factor	AK311900|RABIF|5877|RAB interacting factor	AK223538|RABIF|5877|RAB interacting factor
hg18_v1_chr10_+_86078136_86078612	0.0331188	AAUACUG	NM_018999|FAM190B|54462|family with sequence similarity 190, member B	AK298966|FAM190B|54462|family with sequence similarity 190, member B	BC030528|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr12_-_30721410_30721444	0.0329726	AAUACUG	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr15_+_94677572_94677572	0.0328556	AAUACUG	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chrX_-_114374860_114374890	0.031642	AAUACUG	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg18_v1_chr12_+_54646814_54646899	0.031345	AAUACUG	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	CR603533|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg18_v1_chr4_-_77147625_77147685	0.0303639	AAUACUG	BC042178|CXCL9|4283|chemokine (C-X-C motif) ligand 9	NM_002416|CXCL9|4283|chemokine (C-X-C motif) ligand 9	X72755|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC025745|CXCL9|4283|chemokine (C-X-C motif) ligand 9	AK311852|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC063122|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC095396|CXCL9|4283|chemokine (C-X-C motif) ligand 9
hg18_v1_chr4_+_120353212_120353365	0.0300577	AAUACUG	BC062741|USP53|54532|ubiquitin specific peptidase 53	NM_019050|USP53|54532|ubiquitin specific peptidase 53	CR749490|USP53|54532|ubiquitin specific peptidase 53
hg18_v1_chr7_+_77266017_77266137	0.0300199	AAUACUG	NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2	AK225854|PHTF2|57157|putative homeodomain transcription factor 2	AK090643|PHTF2|57157|putative homeodomain transcription factor 2	AK308289|PHTF2|57157|putative homeodomain transcription factor 2	CR626078|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr15_-_54073024_54073151	0.0292014	AAUACUG	BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg18_v1_chr2_+_208284484_208284609	0.0290915	AAUACUG	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr13_-_20533703_20533729	0.0285998	AAUACUG	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr8_-_101384633_101384662	0.0278886	AAUACUG	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr14_-_68689623_68689713	0.0277621	AAUACUG	NM_003861|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr11_-_47745415_47745641	0.027687	AAUACUG	EU832174|FNBP4|23360|formin binding protein 4	EU832267|FNBP4|23360|formin binding protein 4	AK054636|FNBP4|23360|formin binding protein 4	BC037404|FNBP4|23360|formin binding protein 4	BC006557|FNBP4|23360|formin binding protein 4	NM_015308|FNBP4|23360|formin binding protein 4	AB023231|FNBP4|23360|formin binding protein 4
hg18_v1_chr10_+_64563009_64563066	0.027337	AAUACUG	NM_030759|NRBF2|29982|nuclear receptor binding factor 2	AK054957|NRBF2|29982|nuclear receptor binding factor 2	CR603566|NRBF2|29982|nuclear receptor binding factor 2	AL136656|NRBF2|29982|nuclear receptor binding factor 2
hg18_v1_chr10_-_5895366_5895517	0.027114	AAUACUG	Y13286|GDI2|2665|GDP dissociation inhibitor 2	CR607897|GDI2|2665|GDP dissociation inhibitor 2	AK297177|GDI2|2665|GDP dissociation inhibitor 2	AK297554|GDI2|2665|GDP dissociation inhibitor 2	AK312485|GDI2|2665|GDP dissociation inhibitor 2	NM_001115156|GDI2|2665|GDP dissociation inhibitor 2	NM_001494|GDI2|2665|GDP dissociation inhibitor 2
hg18_v1_chr6_+_131613196_131613400	0.0270075	AAUACUG	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chr2_-_62586979_62587107	0.0268838	AAUACUG	BC047439|TMEM17|200728|transmembrane protein 17	AK091902|TMEM17|200728|transmembrane protein 17	NM_198276|TMEM17|200728|transmembrane protein 17
hg18_v1_chr9_-_97309301_97309301	0.0262038	AAUACUG	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg18_v1_chr4_+_129201952_129201953	0.0260812	AAUACUG	AL832170|LARP1B|55132|La ribonucleoprotein domain family, member 1B	NM_018078|LARP1B|55132|La ribonucleoprotein domain family, member 1B	NM_032239|LARP1B|55132|La ribonucleoprotein domain family, member 1B	NM_178043|LARP1B|55132|La ribonucleoprotein domain family, member 1B
hg18_v1_chr8_-_8788149_8788547	0.0254222	AAUACUG	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg18_v1_chr8_+_86563382_86563562	0.0252213	AAUACUG	NM_000067|CA2|760|carbonic anhydrase II	CR613409|CA2|760|carbonic anhydrase II	AK312978|CA2|760|carbonic anhydrase II	BC011949|CA2|760|carbonic anhydrase II	J03037|CA2|760|carbonic anhydrase II	CR603817|CA2|760|carbonic anhydrase II	CR608877|CA2|760|carbonic anhydrase II	CR602161|CA2|760|carbonic anhydrase II	CR590312|CA2|760|carbonic anhydrase II	CR591919|CA2|760|carbonic anhydrase II	Y00339|CA2|760|carbonic anhydrase II	M36532|CA2|760|carbonic anhydrase II	DQ891320|CA2|760|carbonic anhydrase II	DQ894504|CA2|760|carbonic anhydrase II	CR536526|CA2|760|carbonic anhydrase II	CR541875|CA2|760|carbonic anhydrase II
hg18_v1_chr1_-_113300138_113300342	0.0252028	AAUACUG	BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)
hg18_v1_chr9_+_5440455_5440560	0.0246635	AAUACUG	NM_014143|CD274|29126|CD274 molecule	DQ836393|CD274|29126|CD274 molecule	AK300470|CD274|29126|CD274 molecule	AK314567|CD274|29126|CD274 molecule	AF233516|CD274|29126|CD274 molecule	BC069381|CD274|29126|CD274 molecule
hg18_v1_chr7_+_107088315_107088315	0.0244013	AAUACUG	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg18_v1_chr17_+_19081267_19081336	0.0243674	AAUACUG	NM_001102664|EPN2|22905|epsin 2	NM_014964|EPN2|22905|epsin 2	NM_148921|EPN2|22905|epsin 2	AK092366|EPN2|22905|epsin 2	AK024115|EPN2|22905|epsin 2	AB028988|EPN2|22905|epsin 2	BC070036|EPN2|22905|epsin 2	AK295652|EPN2|22905|epsin 2	AK298006|EPN2|22905|epsin 2	AK307455|EPN2|22905|epsin 2	BC015488|EPN2|22905|epsin 2
hg18_v1_chr5_+_138657229_138657248	0.0239737	AAUACUG	NM_018834|MATR3|9782|matrin 3
hg18_v1_chr19_-_12773591_12773727	0.0237284	AAUACUG	CR625757|PRDX2|7001|peroxiredoxin 2	CR601986|PRDX2|7001|peroxiredoxin 2	BC000452|PRDX2|7001|peroxiredoxin 2	BC003022|PRDX2|7001|peroxiredoxin 2	BC064138|PRDX2|7001|peroxiredoxin 2	CR594988|PRDX2|7001|peroxiredoxin 2	CR599094|PRDX2|7001|peroxiredoxin 2	CR615046|PRDX2|7001|peroxiredoxin 2	CR624097|PRDX2|7001|peroxiredoxin 2	CR602550|PRDX2|7001|peroxiredoxin 2	CR616344|PRDX2|7001|peroxiredoxin 2	Z22548|PRDX2|7001|peroxiredoxin 2	AK289485|PRDX2|7001|peroxiredoxin 2	AK293957|PRDX2|7001|peroxiredoxin 2	CR623841|PRDX2|7001|peroxiredoxin 2	CR622535|PRDX2|7001|peroxiredoxin 2	BC039428|PRDX2|7001|peroxiredoxin 2	AK022395|PRDX2|7001|peroxiredoxin 2	CR598714|PRDX2|7001|peroxiredoxin 2	NM_005809|PRDX2|7001|peroxiredoxin 2	NM_181738|PRDX2|7001|peroxiredoxin 2
hg18_v1_chr8_+_41467220_41467237	0.0237133	AAUACUG	CR616191|GOLGA7|51125|golgin A7	NM_001174124|GOLGA7|51125|golgin A7	NM_016099|GOLGA7|51125|golgin A7
hg18_v1_chr7_-_50767512_50767543	0.0232045	AAUACUG	AF000017|GRB10|2887|growth factor receptor-bound protein 10	AB000731|GRB10|2887|growth factor receptor-bound protein 10	AF001534|GRB10|2887|growth factor receptor-bound protein 10	NM_001001549|GRB10|2887|growth factor receptor-bound protein 10	NM_005311|GRB10|2887|growth factor receptor-bound protein 10	U34355|GRB10|2887|growth factor receptor-bound protein 10
hg18_v1_chr5_-_90714871_90714906	0.0226785	AAUACUG	BC015928|ARRDC3|57561|arrestin domain containing 3	AB037797|ARRDC3|57561|arrestin domain containing 3	BC053619|ARRDC3|57561|arrestin domain containing 3	AK291753|ARRDC3|57561|arrestin domain containing 3	NM_020801|ARRDC3|57561|arrestin domain containing 3
hg18_v1_chr7_+_129038765_129038790	0.0222402	AAUACUG	NM_005011|NRF1|4899|nuclear respiratory factor 1
hg18_v1_chr9_+_111927601_111927626	0.0222166	AAUACUG	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2	AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2
hg18_v1_chrX_+_57634993_57634993	0.0209793	AAUACUG	NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B
hg18_v1_chr10_+_73703682_73704041	0.0209289	AAUACUG	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4	AL136668|DDIT4|54541|DNA-damage-inducible transcript 4	AK000507|DDIT4|54541|DNA-damage-inducible transcript 4	BC007714|DDIT4|54541|DNA-damage-inducible transcript 4	CR595711|DDIT4|54541|DNA-damage-inducible transcript 4	CR619083|DDIT4|54541|DNA-damage-inducible transcript 4	CR621890|DDIT4|54541|DNA-damage-inducible transcript 4	CR601977|DDIT4|54541|DNA-damage-inducible transcript 4	CR591852|DDIT4|54541|DNA-damage-inducible transcript 4	CR593814|DDIT4|54541|DNA-damage-inducible transcript 4	CR616560|DDIT4|54541|DNA-damage-inducible transcript 4	CR598593|DDIT4|54541|DNA-damage-inducible transcript 4	CR599579|DDIT4|54541|DNA-damage-inducible transcript 4	CR600188|DDIT4|54541|DNA-damage-inducible transcript 4	CR608474|DDIT4|54541|DNA-damage-inducible transcript 4	CR609436|DDIT4|54541|DNA-damage-inducible transcript 4	CR610636|DDIT4|54541|DNA-damage-inducible transcript 4	CR614476|DDIT4|54541|DNA-damage-inducible transcript 4	CR624887|DDIT4|54541|DNA-damage-inducible transcript 4	CR598151|DDIT4|54541|DNA-damage-inducible transcript 4	BC015236|DDIT4|54541|DNA-damage-inducible transcript 4	CR599296|DDIT4|54541|DNA-damage-inducible transcript 4	CR599477|DDIT4|54541|DNA-damage-inducible transcript 4	CR616416|DDIT4|54541|DNA-damage-inducible transcript 4	CR619259|DDIT4|54541|DNA-damage-inducible transcript 4	CR594641|DDIT4|54541|DNA-damage-inducible transcript 4	CR601425|DDIT4|54541|DNA-damage-inducible transcript 4	AY090097|DDIT4|54541|DNA-damage-inducible transcript 4	CR595139|DDIT4|54541|DNA-damage-inducible transcript 4	BC000708|DDIT4|54541|DNA-damage-inducible transcript 4	CR590989|DDIT4|54541|DNA-damage-inducible transcript 4	AM392607|DDIT4|54541|DNA-damage-inducible transcript 4	DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4	DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4	CR600907|DDIT4|54541|DNA-damage-inducible transcript 4
hg18_v1_chr17_-_39936453_39936543	0.0208727	AAUACUG	NM_001002909|GPATCH8|23131|G patch domain containing 8
hg18_v1_chr2_+_160277219_160277263	0.0207661	AAUACUG	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr11_+_11819531_11819654	0.0207056	AAUACUG	AK127264|USP47|55031|ubiquitin specific peptidase 47	NM_017944|USP47|55031|ubiquitin specific peptidase 47
hg18_v1_chr11_+_16716723_16716749	0.0205345	AAUACUG	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr11_-_110088330_110088660	0.0199871	AAUACUG	AK307602|ARHGAP20|57569|Rho GTPase activating protein 20	AY496263|ARHGAP20|57569|Rho GTPase activating protein 20	AY496264|ARHGAP20|57569|Rho GTPase activating protein 20	NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20
hg18_v1_chr4_-_186362066_186362210	0.0199414	AAUACUG	AK091993|KIAA1430|57587|KIAA1430	BC020772|KIAA1430|57587|KIAA1430	BC030535|KIAA1430|57587|KIAA1430	NM_020827|KIAA1430|57587|KIAA1430
hg18_v1_chr5_+_142130475_142130510	0.0191031	AAUACUG	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26	NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26
hg18_v1_chr10_+_102662315_102662315	0.0188682	AAUACUG	AF460991|FAM178A|55719|family with sequence similarity 178, member A	AF460992|FAM178A|55719|family with sequence similarity 178, member A	NM_001136123|FAM178A|55719|family with sequence similarity 178, member A	NM_018121|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chrX_+_133334965_133335121	0.0188346	AAUACUG	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr7_+_73136085_73136098	0.0183286	AAUACUG	D26309|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr9_-_126945536_126945689	0.0181965	AAUACUG	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg18_v1_chr2_+_39746525_39746618	0.0180231	AAUACUG	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	CR597741|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg18_v1_chr15_-_73531082_73531139	0.0174341	AAUACUG	AK096477|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	NM_001145358|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)
hg18_v1_chr6_+_18263514_18263755	0.0168791	AAUACUG	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chr8_+_22280703_22280730	0.016816	AAUACUG	NM_001128431|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14	NM_001135154|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14	NM_015359|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14
hg18_v1_chr5_+_138657317_138657399	0.0163008	AAUACUG	CR597092|MATR3|9782|matrin 3	BX537365|MATR3|9782|matrin 3	AK316420|MATR3|9782|matrin 3	CR749210|MATR3|9782|matrin 3	NM_001194955|MATR3|9782|matrin 3	NM_001194956|MATR3|9782|matrin 3	AK299399|MATR3|9782|matrin 3
hg18_v1_chr1_-_148868178_148868234	0.0162739	AAUACUG	AK290064|ENSA|2029|endosulfine alpha	NM_207045|ENSA|2029|endosulfine alpha	NM_207046|ENSA|2029|endosulfine alpha	NM_207047|ENSA|2029|endosulfine alpha
hg18_v1_chr2_+_200879040_200879649	0.0162447	AAUACUG	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg18_v1_chr1_+_67168470_67168640	0.0161171	AAUACUG	AF515446|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)	AY124188|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)	AY124191|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)	AY124194|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)	NM_001077701|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)	NM_001077704|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)	BC017423|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)
hg18_v1_chr6_-_139737042_139737191	0.0159851	AAUACUG	NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr20_-_51633042_51633042	0.0158004	AAUACUG	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg18_v1_chr2_+_231285780_231285800	0.0152713	AAUACUG	NM_016289|CAB39|51719|calcium binding protein 39
hg18_v1_chr11_-_93866554_93866689	0.0150799	AAUACUG	U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg18_v1_chr6_-_40003295_40003432	0.0138203	AAUACUG	AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1	NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1
hg18_v1_chr9_-_34319151_34319271	0.0137885	AAUACUG	NM_194313|KIF24|347240|kinesin family member 24	AK310014|KIF24|347240|kinesin family member 24
hg18_v1_chr7_+_90176647_90176791	0.0133355	AAUACUG	AB020641|CDK14|5218|cyclin-dependent kinase 14	BC152436|CDK14|5218|cyclin-dependent kinase 14	BC167152|CDK14|5218|cyclin-dependent kinase 14	BC167156|CDK14|5218|cyclin-dependent kinase 14	NM_012395|CDK14|5218|cyclin-dependent kinase 14	BC136477|CDK14|5218|cyclin-dependent kinase 14	AK289782|CDK14|5218|cyclin-dependent kinase 14	BC152388|CDK14|5218|cyclin-dependent kinase 14
hg18_v1_chr18_-_42930835_42930904	0.0131432	AAUACUG	CR626039|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2	BC011894|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2	AL136681|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2	BC033031|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2	AK054590|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2	AK292098|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2	BC038100|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2	NM_032124|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2
hg18_v1_chr1_+_87152905_87152977	0.0130375	AAUACUG	BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1
hg18_v1_chr8_-_48813256_48813322	0.0125	AAUACUG	BC105109|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta	NM_005195|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta	M83667|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta
hg18_v1_chr1_+_32703225_32703253	0.0115778	AAUACUG	NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B
hg18_v1_chr18_+_53862386_53862683	0.0113071	AAUACUG	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr11_+_32808045_32808208	0.0109777	AAUACUG	BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
hg18_v1_chr14_+_52266602_52266652	0.0109691	AAUACUG	NM_001130701|STYX|6815|serine/threonine/tyrosine interacting protein	NM_145251|STYX|6815|serine/threonine/tyrosine interacting protein	AL832591|STYX|6815|serine/threonine/tyrosine interacting protein	AK098195|STYX|6815|serine/threonine/tyrosine interacting protein
hg18_v1_chr9_-_37455384_37455406	0.0109358	AAUACUG	AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5	NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5
hg18_v1_chr8_-_94822387_94822420	0.0108077	AAUACUG	NM_203390|RBM12B|389677|RNA binding motif protein 12B
hg18_v1_chr12_+_66328760_66329020	0.0107435	AAUACUG	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg18_v1_chr8_+_23442307_23442323	0.0107057	AAUACUG	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr22_+_36412277_36412366	0.0106569	AAUACUG	NM_024313|NOL12|79159|nucleolar protein 12	CR601334|NOL12|79159|nucleolar protein 12	AK057139|NOL12|79159|nucleolar protein 12	AK294700|NOL12|79159|nucleolar protein 12	AK316443|NOL12|79159|nucleolar protein 12	BC002808|NOL12|79159|nucleolar protein 12	AL160132|NOL12|79159|nucleolar protein 12	CR456463|NOL12|79159|nucleolar protein 12
hg18_v1_chr2_-_25418960_25418973	0.010646	AAUACUG	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha
hg18_v1_chr20_+_43425153_43425310	0.0104926	AAUACUG	NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR605916|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR616955|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR596680|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR623457|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR607560|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR623013|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 read-through transcript	AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR624106|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg18_v1_chr1_+_181075059_181075101	0.0104291	AAUACUG	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr5_-_138803112_138803117	0.0100426	AAUACUG	NM_152686|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18
hg18_v1_chr12_-_29827952_29828123	0.00851588	AAUACUG	GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1	NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1
hg18_v1_chr5_-_74198370_74198418	0.00841642	AAUACUG	AB020695|FAM169A|26049|family with sequence similarity 169, member A	NM_015566|FAM169A|26049|family with sequence similarity 169, member A	AK290004|FAM169A|26049|family with sequence similarity 169, member A
hg18_v1_chr17_+_27288152_27288160	0.00802981	AAUACUG	NM_015355|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)
hg18_v1_chr15_-_81527109_81527130	0.00778798	AAUACUG	NM_001011885|BTBD1|53339|BTB (POZ) domain containing 1	NM_025238|BTBD1|53339|BTB (POZ) domain containing 1
hg18_v1_chrX_+_24077649_24077778	0.00747927	AAUACUG	AB209892|ZFX|7543|zinc finger protein, X-linked	NM_001178086|ZFX|7543|zinc finger protein, X-linked	NM_001178095|ZFX|7543|zinc finger protein, X-linked	X59738|ZFX|7543|zinc finger protein, X-linked	NM_001178084|ZFX|7543|zinc finger protein, X-linked	NM_001178085|ZFX|7543|zinc finger protein, X-linked	NM_003410|ZFX|7543|zinc finger protein, X-linked
hg18_v1_chr6_+_160310118_160310128	0.00653081	AAUACUG	NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor	Y00285|IGF2R|3482|insulin-like growth factor 2 receptor	J03528|IGF2R|3482|insulin-like growth factor 2 receptor
hg18_v1_chr2_+_171998988_171999029	0.00607702	AAUACUG	AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17	NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17	NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17
hg18_v1_chr12_+_112143599_112143654	0.0060585	AAUACUG	AK093490|TPCN1|53373|two pore segment channel 1	NM_001143819|TPCN1|53373|two pore segment channel 1	NM_017901|TPCN1|53373|two pore segment channel 1	AY083666|TPCN1|53373|two pore segment channel 1
hg18_v1_chr9_+_114552871_114552954	0.00541509	AAUACUG	NM_001012994|SNX30|401548|sorting nexin family member 30
hg18_v1_chr7_+_156822420_156822525	0.00530959	AAUACUG	AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR610847|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR598045|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR619720|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR625132|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR620355|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR606288|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR599888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR609360|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AF080569|TMEM135|65084|transmembrane protein 135	AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR612433|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	CR613849|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6	AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6
hg18_v1_chr13_-_78877914_78877996	0.00518524	AAUACUG	BX648672|RBM26|64062|RNA binding motif protein 26	BC111697|RBM26|64062|RNA binding motif protein 26	BC111739|RBM26|64062|RNA binding motif protein 26	BC041655|RBM26|64062|RNA binding motif protein 26	NM_022118|RBM26|64062|RNA binding motif protein 26	AK302871|RBM26|64062|RNA binding motif protein 26
hg18_v1_chr8_+_1759502_1759591	0.00460818	AAUACUG	AB002292|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10	NM_014629|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10	BC112926|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10	CR749570|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10
hg18_v1_chr3_+_184836049_184836139	0.00451507	AAUACUG	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg18_v1_chr7_+_107997544_107997677	0.00435316	AAUACUG	AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	NM_012328|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	CR613647|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	CR624093|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9	CR618176|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9
hg18_v1_chrX_+_84145487_84145560	0.00433958	AAUACUG	AK130506|APOOL|139322|apolipoprotein O-like	NM_198450|APOOL|139322|apolipoprotein O-like	AY358193|APOOL|139322|apolipoprotein O-like	BC107096|APOOL|139322|apolipoprotein O-like	CR749250|APOOL|139322|apolipoprotein O-like
hg18_v1_chr12_+_111340918_111341081	0.00420785	AAUACUG	NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11
hg18_v1_chr6_+_43845915_43846077	0.00405796	AAUACUG	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr17_-_46296376_46296411	0.00373698	AAUACUG	BT019380|TOB1|10140|transducer of ERBB2, 1	BT019381|TOB1|10140|transducer of ERBB2, 1	CR536487|TOB1|10140|transducer of ERBB2, 1	CR541686|TOB1|10140|transducer of ERBB2, 1	DQ890837|TOB1|10140|transducer of ERBB2, 1	DQ893992|TOB1|10140|transducer of ERBB2, 1	DQ893993|TOB1|10140|transducer of ERBB2, 1	BC031406|TOB1|10140|transducer of ERBB2, 1	AY524047|TOB1|10140|transducer of ERBB2, 1	D38305|TOB1|10140|transducer of ERBB2, 1	NM_005749|TOB1|10140|transducer of ERBB2, 1
hg18_v1_chr18_+_30651923_30651923	0.00358919	AAUACUG	AK296450|DTNA|1837|dystrobrevin, alpha	NM_001198943|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr3_-_57653634_57653924	0.00317759	AAUACUG	AK074156|FAM116A|201627|family with sequence similarity 116, member A	BC040291|FAM116A|201627|family with sequence similarity 116, member A	NM_152678|FAM116A|201627|family with sequence similarity 116, member A
hg18_v1_chr10_+_27833167_27833304	0.00292004	AAUACUG	AY574034|RAB18|22931|RAB18, member RAS oncogene family	AK295443|RAB18|22931|RAB18, member RAS oncogene family	AK297629|RAB18|22931|RAB18, member RAS oncogene family	AK299457|RAB18|22931|RAB18, member RAS oncogene family	BC029350|RAB18|22931|RAB18, member RAS oncogene family	AF087860|RAB18|22931|RAB18, member RAS oncogene family	BC015014|RAB18|22931|RAB18, member RAS oncogene family	NM_021252|RAB18|22931|RAB18, member RAS oncogene family	AL136734|RAB18|22931|RAB18, member RAS oncogene family	CR599854|RAB18|22931|RAB18, member RAS oncogene family	CR590751|RAB18|22931|RAB18, member RAS oncogene family	AK223153|RAB18|22931|RAB18, member RAS oncogene family	AF137372|RAB18|22931|RAB18, member RAS oncogene family	AF498950|RAB18|22931|RAB18, member RAS oncogene family	AK001555|RAB18|22931|RAB18, member RAS oncogene family	AM393142|RAB18|22931|RAB18, member RAS oncogene family	BT009840|RAB18|22931|RAB18, member RAS oncogene family	CR533455|RAB18|22931|RAB18, member RAS oncogene family
hg18_v1_chr11_+_94346428_94346539	0.00261672	AAUACUG	BC031862|KDM4D|55693|lysine (K)-specific demethylase 4D	NM_018039|KDM4D|55693|lysine (K)-specific demethylase 4D
hg18_v1_chrX_-_33056464_33056465	0.00246252	AAUACUG	NM_004010|DMD|1756|dystrophin	S81419|DMD|1756|dystrophin	NM_004009|DMD|1756|dystrophin	S64152|DMD|1756|dystrophin
hg18_v1_chr2_+_44249487_44249552	0.00196361	AAUACUG	NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B	BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B
hg18_v1_chr11_-_89596179_89596179	0.00190154	AAUACUG	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1	NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1	NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1
hg18_v1_chr7_+_36395913_36396017	0.00154498	AAUACUG	BC070066|ANLN|54443|anillin, actin binding protein	NM_018685|ANLN|54443|anillin, actin binding protein	AK299803|ANLN|54443|anillin, actin binding protein	AK291254|ANLN|54443|anillin, actin binding protein	AF273437|ANLN|54443|anillin, actin binding protein
hg18_v1_chr10_-_104252394_104252501	0.00149839	AAUACUG	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR610318|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR600058|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg18_v1_chr11_+_111313067_111313170	0.00110586	AAUACUG	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr4_-_186970366_186970403	0.000416637	AAUACUG	AK225327|SORBS2|8470|sorbin and SH3 domain containing 2	AF049884|SORBS2|8470|sorbin and SH3 domain containing 2	CR625998|SORBS2|8470|sorbin and SH3 domain containing 2	NM_003603|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145670|SORBS2|8470|sorbin and SH3 domain containing 2
