hg18_v1_chr4_-_141294682_141294883	1.32624	ACAGUAU	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)
hg18_v1_chr7_-_27180398_27180479	1.03168	ACAGUAU	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg18_v1_chr7_-_130891861_130891945	0.939323	ACAGUAU	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr9_+_131974506_131974763	0.875854	ACAGUAU	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg18_v1_chr5_-_38592439_38592532	0.78283	ACAGUAU	AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr3_+_30622905_30623148	0.767577	ACAGUAU	BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)
hg18_v1_chr1_+_117253882_117254448	0.758394	ACAGUAU	AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator	AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator	BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator	NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator	BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator	BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator	BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator	BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator
hg18_v1_chr6_+_136214495_136214594	0.674172	ACAGUAU	AK290582|PDE7B|27115|phosphodiesterase 7B	AB038040|PDE7B|27115|phosphodiesterase 7B	NM_018945|PDE7B|27115|phosphodiesterase 7B	AJ251860|PDE7B|27115|phosphodiesterase 7B	BC070267|PDE7B|27115|phosphodiesterase 7B
hg18_v1_chr5_-_58370693_58371578	0.667006	ACAGUAU	U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr4_+_126457016_126457016	0.650792	ACAGUAU	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)
hg18_v1_chr6_+_107917965_107918278	0.635663	ACAGUAU	NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)	BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)
hg18_v1_chr5_+_172000793_172000924	0.580937	ACAGUAU	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)	GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)	NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)
hg18_v1_chr4_+_144477432_144477499	0.545913	ACAGUAU	NM_002039|GAB1|2549|GRB2-associated binding protein 1	NM_207123|GAB1|2549|GRB2-associated binding protein 1	AK289767|GAB1|2549|GRB2-associated binding protein 1	BC064848|GAB1|2549|GRB2-associated binding protein 1
hg18_v1_chr4_-_99798563_99799002	0.512061	ACAGUAU	BC009704|TSPAN5|10098|tetraspanin 5	AF065389|TSPAN5|10098|tetraspanin 5	AK315723|TSPAN5|10098|tetraspanin 5	NM_005723|TSPAN5|10098|tetraspanin 5
hg18_v1_chr2_-_235070431_235070485	0.511486	ACAGUAU	NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C	BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C
hg18_v1_chr2_+_66516020_66516035	0.509988	ACAGUAU	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg18_v1_chr18_+_3441589_3441674	0.506547	ACAGUAU	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr2_+_159533329_159533458	0.502226	ACAGUAU	BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
hg18_v1_chr11_+_129823667_129824078	0.49191	ACAGUAU	AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15	BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15	NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15
hg18_v1_chr9_+_27099138_27099146	0.466637	ACAGUAU	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg18_v1_chr16_-_86082818_86082965	0.459843	ACAGUAU	AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14	NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14	AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14	BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14
hg18_v1_chr1_-_68071635_68071762	0.450256	ACAGUAU	AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	CR605876|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12
hg18_v1_chr7_+_116099648_116099768	0.44035	ACAGUAU	J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)
hg18_v1_chr16_-_17472238_17472375	0.432166	ACAGUAU	AJ539163|XYLT1|64131|xylosyltransferase I	NM_022166|XYLT1|64131|xylosyltransferase I
hg18_v1_chr1_+_33494745_33494760	0.422103	ACAGUAU	NM_152493|ZNF362|149076|zinc finger protein 362
hg18_v1_chr7_-_27162688_27162853	0.413306	ACAGUAU	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg18_v1_chr12_-_26169074_26169303	0.411982	ACAGUAU	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg18_v1_chr12_-_87498225_87498382	0.411577	ACAGUAU	BC074725|KITLG|4254|KIT ligand	AK293002|KITLG|4254|KIT ligand	AF119835|KITLG|4254|KIT ligand	AF400437|KITLG|4254|KIT ligand	BC126166|KITLG|4254|KIT ligand	BC143899|KITLG|4254|KIT ligand	BC069797|KITLG|4254|KIT ligand	BC069733|KITLG|4254|KIT ligand	BC069783|KITLG|4254|KIT ligand	AF400436|KITLG|4254|KIT ligand	M59964|KITLG|4254|KIT ligand	AK290319|KITLG|4254|KIT ligand	NM_000899|KITLG|4254|KIT ligand	NM_003994|KITLG|4254|KIT ligand
hg18_v1_chr5_-_38631263_38631263	0.409765	ACAGUAU	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr2_-_216009015_216009040	0.403227	ACAGUAU	BC117176|FN1|2335|fibronectin 1	BC143754|FN1|2335|fibronectin 1	BC143763|FN1|2335|fibronectin 1	AB209840|FN1|2335|fibronectin 1	CR749316|FN1|2335|fibronectin 1	CR749317|FN1|2335|fibronectin 1	AB191261|FN1|2335|fibronectin 1	AL832202|FN1|2335|fibronectin 1	AL832771|FN1|2335|fibronectin 1	BC078656|FN1|2335|fibronectin 1	BC100030|FN1|2335|fibronectin 1	BX537590|FN1|2335|fibronectin 1	BX538017|FN1|2335|fibronectin 1	BX538018|FN1|2335|fibronectin 1	BX640608|FN1|2335|fibronectin 1	BX640731|FN1|2335|fibronectin 1	BX640802|FN1|2335|fibronectin 1	BX640803|FN1|2335|fibronectin 1	BX640875|FN1|2335|fibronectin 1	BX640999|FN1|2335|fibronectin 1	BX649182|FN1|2335|fibronectin 1	NM_002026|FN1|2335|fibronectin 1	NM_054034|FN1|2335|fibronectin 1	NM_212474|FN1|2335|fibronectin 1	NM_212476|FN1|2335|fibronectin 1	NM_212478|FN1|2335|fibronectin 1	NM_212482|FN1|2335|fibronectin 1
hg18_v1_chr1_-_184916044_184916183	0.399705	ACAGUAU	AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg18_v1_chr14_-_60260211_60260604	0.396075	ACAGUAU	AF032107|SIX4|51804|SIX homeobox 4	BC098135|SIX4|51804|SIX homeobox 4	BC098282|SIX4|51804|SIX homeobox 4	BC099722|SIX4|51804|SIX homeobox 4	BC101934|SIX4|51804|SIX homeobox 4	EU446619|SIX4|51804|SIX homeobox 4	EU446844|SIX4|51804|SIX homeobox 4	NM_017420|SIX4|51804|SIX homeobox 4
hg18_v1_chr1_-_95165089_95165368	0.390852	ACAGUAU	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	CR622382|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg18_v1_chr1_+_64709063_64709149	0.389611	ACAGUAU	NM_020925|CACHD1|57685|cache domain containing 1
hg18_v1_chr6_-_91063181_91063284	0.386412	ACAGUAU	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr8_-_81949570_81949570	0.385149	ACAGUAU	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg18_v1_chr3_+_25444753_25444805	0.384442	ACAGUAU	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta	CR621137|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr9_+_117955890_117955892	0.384016	ACAGUAU	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1
hg18_v1_chr1_-_223907283_223907538	0.378895	ACAGUAU	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg18_v1_chr15_-_98699628_98699705	0.367547	ACAGUAU	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17	NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17
hg18_v1_chr4_+_108965167_108965266	0.364445	ACAGUAU	AK290344|SGMS2|166929|sphingomyelin synthase 2	NM_001136258|SGMS2|166929|sphingomyelin synthase 2	AF452717|SGMS2|166929|sphingomyelin synthase 2
hg18_v1_chr14_-_20807346_20807477	0.360435	ACAGUAU	M16342|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC108658|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR590393|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR596572|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BX247992|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR608416|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR614884|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR614454|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR622833|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC089438|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR593299|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR595206|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR618859|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR596303|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR624349|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR607544|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR612229|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR620295|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC008364|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR600200|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR612035|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR615906|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR617382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR622649|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR600838|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR615305|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR622198|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR594564|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC003394|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC071943|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BX247961|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR590869|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR605657|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR607820|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR610764|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR613450|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR613941|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR614086|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR614691|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR615753|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR618250|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR619218|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR619785|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR620056|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR620247|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR621771|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR622118|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR622670|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR623739|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR624217|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR624598|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	M29063|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR609418|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR614896|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR622865|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AB209527|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK223517|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC066932|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK298906|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK312382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	D28382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK297482|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK299923|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK312338|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC103758|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK292619|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC007052|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC008423|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AL833432|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	BC092433|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	CR622546|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK225032|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	AK302213|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	NM_001077442|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	NM_001077443|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	NM_004500|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	NM_031314|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)
hg18_v1_chr4_-_7991992_7992584	0.357407	ACAGUAU	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg18_v1_chr1_-_240679380_240679406	0.356223	ACAGUAU	AK091691|PLD5|200150|phospholipase D family, member 5	AK307857|PLD5|200150|phospholipase D family, member 5	AK295421|PLD5|200150|phospholipase D family, member 5	AY461578|PLD5|200150|phospholipase D family, member 5	NM_001195811|PLD5|200150|phospholipase D family, member 5	NM_001195812|PLD5|200150|phospholipase D family, member 5
hg18_v1_chr20_-_32363268_32363268	0.355892	ACAGUAU	AK097610|AHCY|191|adenosylhomocysteinase	NM_001161766|AHCY|191|adenosylhomocysteinase
hg18_v1_chr3_-_126576693_126576887	0.355402	ACAGUAU	AF039019|ZNF148|7707|zinc finger protein 148	AL833616|ZNF148|7707|zinc finger protein 148	AF432210|ZNF148|7707|zinc finger protein 148	AJ236885|ZNF148|7707|zinc finger protein 148	L04282|ZNF148|7707|zinc finger protein 148	BC035591|ZNF148|7707|zinc finger protein 148	BC018971|ZNF148|7707|zinc finger protein 148	AK314203|ZNF148|7707|zinc finger protein 148	BC050260|ZNF148|7707|zinc finger protein 148	NM_021964|ZNF148|7707|zinc finger protein 148
hg18_v1_chr18_+_3437607_3437627	0.350543	ACAGUAU	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1	AK291112|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr18_+_54681040_54681159	0.343475	ACAGUAU	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg18_v1_chr8_-_124613557_124613563	0.335774	ACAGUAU	BC120963|FBXO32|114907|F-box protein 32	BC120964|FBXO32|114907|F-box protein 32	BC024030|FBXO32|114907|F-box protein 32	NM_148177|FBXO32|114907|F-box protein 32
hg18_v1_chr8_-_60194099_60194353	0.334211	ACAGUAU	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box	DQ894852|TOX|9760|thymocyte selection-associated high mobility group box	AK000971|TOX|9760|thymocyte selection-associated high mobility group box	BC016665|TOX|9760|thymocyte selection-associated high mobility group box	AK302331|TOX|9760|thymocyte selection-associated high mobility group box	AB018351|TOX|9760|thymocyte selection-associated high mobility group box	NM_014729|TOX|9760|thymocyte selection-associated high mobility group box
hg18_v1_chr5_-_58607673_58607701	0.333232	ACAGUAU	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr16_-_10581944_10582039	0.331799	ACAGUAU	AK123602|EMP2|2013|epithelial membrane protein 2	BC009687|EMP2|2013|epithelial membrane protein 2	AK313134|EMP2|2013|epithelial membrane protein 2	NM_001424|EMP2|2013|epithelial membrane protein 2
hg18_v1_chr7_-_5429702_5429702	0.330953	ACAGUAU	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18
hg18_v1_chr9_-_98421894_98421988	0.325063	ACAGUAU	AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr8_-_124622434_124622628	0.324881	ACAGUAU	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg18_v1_chr20_-_3336219_3336285	0.321899	ACAGUAU	NM_001009984|C20orf194|25943|chromosome 20 open reading frame 194
hg18_v1_chr6_-_63053811_63054110	0.321412	ACAGUAU	AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2	AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2	AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2	NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2	BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2
hg18_v1_chr14_+_74815233_74815438	0.318682	ACAGUAU	NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog	CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog
hg18_v1_chr3_+_25444837_25444905	0.318333	ACAGUAU	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr6_+_121798443_121798605	0.312636	ACAGUAU	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg18_v1_chrX_-_41667174_41667365	0.311894	ACAGUAU	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg18_v1_chr1_+_61320213_61321079	0.308798	ACAGUAU	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg18_v1_chr6_-_99904251_99904251	0.307485	ACAGUAU	BC004869|C6orf168|84553|chromosome 6 open reading frame 168	BC011583|C6orf168|84553|chromosome 6 open reading frame 168	NM_032511|C6orf168|84553|chromosome 6 open reading frame 168
hg18_v1_chr18_+_3439972_3440218	0.306863	ACAGUAU	NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1	NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1	AK309471|TGIF1|7050|TGFB-induced factor homeobox 1	CR606247|TGIF1|7050|TGFB-induced factor homeobox 1	X89750|TGIF1|7050|TGFB-induced factor homeobox 1	CR614605|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr18_-_53621277_53621660	0.306453	ACAGUAU	NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1
hg18_v1_chr6_-_134680888_134680888	0.305945	ACAGUAU	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr15_+_94670160_94670170	0.305606	ACAGUAU	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr17_+_52026058_52026079	0.305527	ACAGUAU	AK314080|NOG|9241|noggin	NM_005450|NOG|9241|noggin
hg18_v1_chr3_+_69871252_69871435	0.300762	ACAGUAU	NM_198159|MITF|4286|microphthalmia-associated transcription factor	AK291318|MITF|4286|microphthalmia-associated transcription factor	AL110195|MITF|4286|microphthalmia-associated transcription factor	AB006909|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr19_+_18655391_18655458	0.299945	ACAGUAU	AK024089|CRTC1|23373|CREB regulated transcription coactivator 1	AY040323|CRTC1|23373|CREB regulated transcription coactivator 1	NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1	NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1
hg18_v1_chr8_+_136538739_136538941	0.29696	ACAGUAU	CR591014|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg18_v1_chr20_+_51235228_51235228	0.292994	ACAGUAU	AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2	NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2
hg18_v1_chr4_+_95898098_95898161	0.291267	ACAGUAU	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB	U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB
hg18_v1_chr10_-_126706442_126706442	0.287136	ACAGUAU	AF222711|CTBP2|1488|C-terminal binding protein 2	NM_022802|CTBP2|1488|C-terminal binding protein 2
hg18_v1_chr1_+_61319976_61320121	0.282795	ACAGUAU	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg18_v1_chr18_+_3443771_3443771	0.278241	ACAGUAU	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr5_-_107034484_107034494	0.272975	ACAGUAU	AK308672|EFNA5|1946|ephrin-A5	NM_001962|EFNA5|1946|ephrin-A5	U26403|EFNA5|1946|ephrin-A5
hg18_v1_chr22_+_27609889_27609981	0.271981	ACAGUAU	AB051436|ZNRF3|84133|zinc and ring finger 3	NM_032173|ZNRF3|84133|zinc and ring finger 3	CR456397|ZNRF3|84133|zinc and ring finger 3
hg18_v1_chr2_+_56264627_56264791	0.26959	ACAGUAU	AB067499|CCDC85A|114800|coiled-coil domain containing 85A	NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A	BC131557|CCDC85A|114800|coiled-coil domain containing 85A
hg18_v1_chr18_+_3402071_3402071	0.263713	ACAGUAU	NM_174886|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr15_-_58671929_58672036	0.255162	ACAGUAU	L14611|RORA|6095|RAR-related orphan receptor A	BC100987|RORA|6095|RAR-related orphan receptor A	BC100988|RORA|6095|RAR-related orphan receptor A	BC100989|RORA|6095|RAR-related orphan receptor A	BC100990|RORA|6095|RAR-related orphan receptor A	CR591459|RORA|6095|RAR-related orphan receptor A	NM_134262|RORA|6095|RAR-related orphan receptor A	CR611772|RORA|6095|RAR-related orphan receptor A
hg18_v1_chr6_+_144040751_144040989	0.252624	ACAGUAU	AK298263|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2	CR749345|PHACTR2|9749|phosphatase and actin regulator 2	AK297799|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr9_+_115678365_115678476	0.24755	ACAGUAU	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr21_-_42219849_42219867	0.240683	ACAGUAU	BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2	AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2	NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2
hg18_v1_chr9_-_106730256_106730346	0.237535	ACAGUAU	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg18_v1_chr1_+_176960896_176961097	0.237114	ACAGUAU	BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2
hg18_v1_chrX_+_51503219_51503283	0.237112	ACAGUAU	NM_018094|GSPT2|23708|G1 to S phase transition 2	BC036077|GSPT2|23708|G1 to S phase transition 2	AK298868|GSPT2|23708|G1 to S phase transition 2	AK023155|GSPT2|23708|G1 to S phase transition 2	AK001303|GSPT2|23708|G1 to S phase transition 2
hg18_v1_chr6_-_28432026_28432026	0.236757	ACAGUAU	AK095261|ZNF323|64288|zinc finger protein 323	NM_001135215|ZNF323|64288|zinc finger protein 323
hg18_v1_chr15_+_94674849_94675114	0.234531	ACAGUAU	BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr6_+_148705421_148705491	0.233264	ACAGUAU	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr6_-_134540666_134540705	0.232516	ACAGUAU	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr1_+_945331_945388	0.228529	ACAGUAU	AB191264|AGRN|375790|agrin	NM_198576|AGRN|375790|agrin
hg18_v1_chr6_+_143971009_143971102	0.22528	ACAGUAU	NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2	NM_014721|PHACTR2|9749|phosphatase and actin regulator 2	AK300221|PHACTR2|9749|phosphatase and actin regulator 2	AB014580|PHACTR2|9749|phosphatase and actin regulator 2	BC152416|PHACTR2|9749|phosphatase and actin regulator 2	BC150630|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr7_-_148788799_148788985	0.224223	ACAGUAU	AB033111|ZNF777|27153|zinc finger protein 777	NM_015694|ZNF777|27153|zinc finger protein 777
hg18_v1_chr1_+_32346206_32346262	0.221619	ACAGUAU	NM_012316|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)	AK002111|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)	AK315490|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)	AK128609|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)	BC020520|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)	AF060543|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)
hg18_v1_chr15_-_50608296_50608801	0.219167	ACAGUAU	AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)
hg18_v1_chr8_-_42184350_42184353	0.217279	ACAGUAU	AK289387|PLAT|5327|plasminogen activator, tissue	AK290575|PLAT|5327|plasminogen activator, tissue	NM_000930|PLAT|5327|plasminogen activator, tissue	NM_033011|PLAT|5327|plasminogen activator, tissue
hg18_v1_chr11_+_32870935_32871367	0.212574	ACAGUAU	BC112935|QSER1|79832|glutamine and serine rich 1	NM_001076786|QSER1|79832|glutamine and serine rich 1
hg18_v1_chr1_-_215329569_215329600	0.212469	ACAGUAU	AF058291|ESRRG|2104|estrogen-related receptor gamma	AK298851|ESRRG|2104|estrogen-related receptor gamma	AK291028|ESRRG|2104|estrogen-related receptor gamma	NM_206594|ESRRG|2104|estrogen-related receptor gamma	NM_206595|ESRRG|2104|estrogen-related receptor gamma	BX649009|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr20_+_51022352_51022352	0.211914	ACAGUAU	BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2	NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2
hg18_v1_chr3_+_8750485_8750565	0.211791	ACAGUAU	AK291892|CAV3|859|caveolin 3	NM_033337|CAV3|859|caveolin 3	NM_001234|CAV3|859|caveolin 3	BC069368|CAV3|859|caveolin 3	AF036365|CAV3|859|caveolin 3	BC102033|CAV3|859|caveolin 3	BC102036|CAV3|859|caveolin 3	BC102037|CAV3|859|caveolin 3	Y14747|CAV3|859|caveolin 3	AF043101|CAV3|859|caveolin 3
hg18_v1_chr15_-_58706934_58707020	0.208838	ACAGUAU	U04899|RORA|6095|RAR-related orphan receptor A	U04898|RORA|6095|RAR-related orphan receptor A	NM_002943|RORA|6095|RAR-related orphan receptor A	NM_134260|RORA|6095|RAR-related orphan receptor A
hg18_v1_chr6_-_91063301_91063365	0.208302	ACAGUAU	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr4_+_8322358_8322593	0.205416	ACAGUAU	NM_053044|HTRA3|94031|HtrA serine peptidase 3	AY040094|HTRA3|94031|HtrA serine peptidase 3	BC034390|HTRA3|94031|HtrA serine peptidase 3	BC035717|HTRA3|94031|HtrA serine peptidase 3	CR604057|HTRA3|94031|HtrA serine peptidase 3	AY280665|HTRA3|94031|HtrA serine peptidase 3	AY280666|HTRA3|94031|HtrA serine peptidase 3	DQ891188|HTRA3|94031|HtrA serine peptidase 3	DQ894371|HTRA3|94031|HtrA serine peptidase 3
hg18_v1_chr10_-_61819493_61819493	0.197828	ACAGUAU	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr18_-_51406841_51406859	0.197433	ACAGUAU	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg18_v1_chrX_-_99778340_99778503	0.197126	ACAGUAU	CR604634|TSPAN6|7105|tetraspanin 6	CR597714|TSPAN6|7105|tetraspanin 6	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	CR598712|TSPAN6|7105|tetraspanin 6	CR598720|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg18_v1_chr3_+_36396948_36397164	0.193143	ACAGUAU	AK313493|STAC|6769|SH3 and cysteine rich domain	BC020221|STAC|6769|SH3 and cysteine rich domain	AK299160|STAC|6769|SH3 and cysteine rich domain	AK302697|STAC|6769|SH3 and cysteine rich domain	D86640|STAC|6769|SH3 and cysteine rich domain	NM_003149|STAC|6769|SH3 and cysteine rich domain	DQ892180|STAC|6769|SH3 and cysteine rich domain	DQ895374|STAC|6769|SH3 and cysteine rich domain	DQ895375|STAC|6769|SH3 and cysteine rich domain	AK310425|STAC|6769|SH3 and cysteine rich domain
hg18_v1_chr9_-_97319067_97319159	0.191539	ACAGUAU	AB189436|PTCH1|5727|patched 1	AB189437|PTCH1|5727|patched 1	NM_001083602|PTCH1|5727|patched 1	NM_001083603|PTCH1|5727|patched 1	BC043542|PTCH1|5727|patched 1
hg18_v1_chrX_+_67830204_67830206	0.18977	ACAGUAU	AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8	NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8
hg18_v1_chrX_-_32340291_32340291	0.18888	ACAGUAU	NM_004011|DMD|1756|dystrophin	NM_004012|DMD|1756|dystrophin
hg18_v1_chrX_+_67784235_67784334	0.188782	ACAGUAU	BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8	NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8	NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8	CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8
hg18_v1_chr7_-_6278662_6278851	0.187313	ACAGUAU	DQ891736|CYTH3|9265|cytohesin 3	DQ894912|CYTH3|9265|cytohesin 3	EU176610|CYTH3|9265|cytohesin 3	AJ223957|CYTH3|9265|cytohesin 3	AJ005197|CYTH3|9265|cytohesin 3	NM_004227|CYTH3|9265|cytohesin 3	AK313728|CYTH3|9265|cytohesin 3	BC028717|CYTH3|9265|cytohesin 3
hg18_v1_chrX_+_100361588_100361750	0.186824	ACAGUAU	NM_001171184|DRP2|1821|dystrophin related protein 2	NM_001939|DRP2|1821|dystrophin related protein 2	AB209305|DRP2|1821|dystrophin related protein 2	BC036095|DRP2|1821|dystrophin related protein 2	U43519|DRP2|1821|dystrophin related protein 2	AK289825|DRP2|1821|dystrophin related protein 2	AK295843|DRP2|1821|dystrophin related protein 2	BC111695|DRP2|1821|dystrophin related protein 2
hg18_v1_chr11_-_8789457_8789457	0.186103	ACAGUAU	NM_139157|ST5|6764|suppression of tumorigenicity 5	U15131|ST5|6764|suppression of tumorigenicity 5	U15780|ST5|6764|suppression of tumorigenicity 5
hg18_v1_chr10_-_126839546_126839621	0.184399	ACAGUAU	BC047018|CTBP2|1488|C-terminal binding protein 2	NM_001083914|CTBP2|1488|C-terminal binding protein 2
hg18_v1_chr1_-_21544492_21544643	0.182443	ACAGUAU	X98272|ECE1|1889|endothelin converting enzyme 1	NM_001113348|ECE1|1889|endothelin converting enzyme 1
hg18_v1_chr5_+_52812236_52812378	0.18166	ACAGUAU	NM_006350|FST|10468|follistatin	NM_013409|FST|10468|follistatin	AB451330|FST|10468|follistatin	AB451474|FST|10468|follistatin	CR541813|FST|10468|follistatin	DQ893433|FST|10468|follistatin	DQ896745|FST|10468|follistatin
hg18_v1_chr7_-_13996166_13996166	0.180886	ACAGUAU	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg18_v1_chr11_-_86343859_86344214	0.180516	ACAGUAU	BC025750|FZD4|8322|frizzled homolog 4 (Drosophila)	AB054881|FZD4|8322|frizzled homolog 4 (Drosophila)	BC114527|FZD4|8322|frizzled homolog 4 (Drosophila)	BC114622|FZD4|8322|frizzled homolog 4 (Drosophila)	AB032417|FZD4|8322|frizzled homolog 4 (Drosophila)	NM_012193|FZD4|8322|frizzled homolog 4 (Drosophila)	AK292768|FZD4|8322|frizzled homolog 4 (Drosophila)
hg18_v1_chr11_-_8788765_8788817	0.180327	ACAGUAU	AK312305|ST5|6764|suppression of tumorigenicity 5	BX647431|ST5|6764|suppression of tumorigenicity 5	NM_213618|ST5|6764|suppression of tumorigenicity 5
hg18_v1_chrX_+_144716619_144716750	0.179808	ACAGUAU	NM_004709|CXorf1|9142|chromosome X open reading frame 1	Y08902|CXorf1|9142|chromosome X open reading frame 1	BC113600|CXorf1|9142|chromosome X open reading frame 1	BC113604|CXorf1|9142|chromosome X open reading frame 1
hg18_v1_chr13_-_105985313_105985337	0.179304	ACAGUAU	BC069342|EFNB2|1948|ephrin-B2	BC074856|EFNB2|1948|ephrin-B2	BC074857|EFNB2|1948|ephrin-B2	U16797|EFNB2|1948|ephrin-B2	U81262|EFNB2|1948|ephrin-B2	BC105955|EFNB2|1948|ephrin-B2	BC105956|EFNB2|1948|ephrin-B2	BC105957|EFNB2|1948|ephrin-B2	L38734|EFNB2|1948|ephrin-B2	NM_004093|EFNB2|1948|ephrin-B2
hg18_v1_chr4_-_73653331_73653379	0.178741	ACAGUAU	AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg18_v1_chr2_-_144994349_144994434	0.178467	ACAGUAU	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2	AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2
hg18_v1_chr1_+_61315516_61315533	0.177073	ACAGUAU	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr6_-_82519093_82519168	0.172538	ACAGUAU	AJ420592|FAM46A|55603|family with sequence similarity 46, member A	BC000683|FAM46A|55603|family with sequence similarity 46, member A	AK000044|FAM46A|55603|family with sequence similarity 46, member A	BX648876|FAM46A|55603|family with sequence similarity 46, member A	AF350451|FAM46A|55603|family with sequence similarity 46, member A	BC007351|FAM46A|55603|family with sequence similarity 46, member A	AK056057|FAM46A|55603|family with sequence similarity 46, member A	AK292109|FAM46A|55603|family with sequence similarity 46, member A	NM_017633|FAM46A|55603|family with sequence similarity 46, member A
hg18_v1_chr6_-_134538762_134538821	0.171786	ACAGUAU	NM_001143678|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK298688|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chrX_-_131375217_131375316	0.170997	ACAGUAU	AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr12_+_62524778_62524849	0.170802	ACAGUAU	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr13_-_109757442_109757578	0.17062	ACAGUAU	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr10_-_105604942_105605578	0.170328	ACAGUAU	NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A
hg18_v1_chr6_+_34964999_34965157	0.168085	ACAGUAU	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg18_v1_chr2_+_225973845_225973934	0.167444	ACAGUAU	NM_020864|KIAA1486|57624|KIAA1486	BC131727|KIAA1486|57624|KIAA1486	AB040919|KIAA1486|57624|KIAA1486
hg18_v1_chr15_+_37660568_37660675	0.164913	ACAGUAU	AK304754|THBS1|7057|thrombospondin 1	AK291639|THBS1|7057|thrombospondin 1	NM_003246|THBS1|7057|thrombospondin 1	AB209912|THBS1|7057|thrombospondin 1	BC136469|THBS1|7057|thrombospondin 1	BC136470|THBS1|7057|thrombospondin 1	M14326|THBS1|7057|thrombospondin 1	X14787|THBS1|7057|thrombospondin 1	M25631|THBS1|7057|thrombospondin 1	X04665|THBS1|7057|thrombospondin 1
hg18_v1_chr18_-_50777634_50777736	0.163267	ACAGUAU	AF273051|CCDC68|80323|coiled-coil domain containing 68	BC029508|CCDC68|80323|coiled-coil domain containing 68	CR592235|CCDC68|80323|coiled-coil domain containing 68	NM_025214|CCDC68|80323|coiled-coil domain containing 68
hg18_v1_chr12_-_41269679_41269840	0.161423	ACAGUAU	BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)	BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)	AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr9_-_138126917_138126996	0.159478	ACAGUAU	BC015649|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing	NM_144653|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing
hg18_v1_chr4_-_125853166_125853362	0.15838	ACAGUAU	AK291068|ANKRD50|57182|ankyrin repeat domain 50	AK295135|ANKRD50|57182|ankyrin repeat domain 50	NM_001167882|ANKRD50|57182|ankyrin repeat domain 50	NM_020337|ANKRD50|57182|ankyrin repeat domain 50
hg18_v1_chr1_+_26895108_26895110	0.156616	ACAGUAU	NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr5_+_60663842_60663869	0.156346	ACAGUAU	NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6
hg18_v1_chr10_+_11099860_11099932	0.155698	ACAGUAU	AK314087|CELF2|10659|CUGBP, Elav-like family member 2	NM_006561|CELF2|10659|CUGBP, Elav-like family member 2	BC036391|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr6_-_85530617_85530672	0.15487	ACAGUAU	NM_001080508|TBX18|9096|T-box 18	BC157841|TBX18|9096|T-box 18	BC132715|TBX18|9096|T-box 18
hg18_v1_chr3_-_188935363_188935388	0.152836	ACAGUAU	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr12_-_52356778_52356778	0.152094	ACAGUAU	NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
hg18_v1_chr3_-_102714663_102714774	0.152062	ACAGUAU	AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7	AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7	AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7	BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7	AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7	AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7
hg18_v1_chr7_-_120285364_120285428	0.151407	ACAGUAU	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr1_+_218768170_218768191	0.147665	ACAGUAU	AB040910|MARK1|4139|MAP/microtubule affinity-regulating kinase 1	NM_018650|MARK1|4139|MAP/microtubule affinity-regulating kinase 1
hg18_v1_chr3_-_57088332_57088375	0.144328	ACAGUAU	AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr3_-_188936941_188936978	0.143556	ACAGUAU	S67779|BCL6|604|B-cell CLL/lymphoma 6	NM_001130845|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr6_-_16869579_16869773	0.143422	ACAGUAU	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg18_v1_chr10_-_725522_725861	0.143289	ACAGUAU	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg18_v1_chr2_-_40593074_40593078	0.143283	ACAGUAU	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1
hg18_v1_chr3_-_126257425_126257556	0.140996	ACAGUAU	NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)
hg18_v1_chr18_+_44319365_44320177	0.1407	ACAGUAU	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor	BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor
hg18_v1_chr13_-_47473393_47473512	0.138397	ACAGUAU	CR598689|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	CR596143|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	CR625494|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit
hg18_v1_chr1_+_167342493_167342694	0.137681	ACAGUAU	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	CR622201|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide
hg18_v1_chr11_+_33520348_33520452	0.137282	ACAGUAU	AK124395|C11orf41|25758|chromosome 11 open reading frame 41	NM_012194|C11orf41|25758|chromosome 11 open reading frame 41
hg18_v1_chr1_+_76312962_76313138	0.136789	ACAGUAU	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg18_v1_chr1_+_182622751_182622801	0.136626	ACAGUAU	NM_030806|C1orf21|81563|chromosome 1 open reading frame 21
hg18_v1_chr10_+_5478521_5478726	0.136592	ACAGUAU	NM_005863|NET1|10276|neuroepithelial cell transforming 1	AK294244|NET1|10276|neuroepithelial cell transforming 1	AK304028|NET1|10276|neuroepithelial cell transforming 1	AK315566|NET1|10276|neuroepithelial cell transforming 1	AK024919|NET1|10276|neuroepithelial cell transforming 1	AJ010046|NET1|10276|neuroepithelial cell transforming 1	BC010285|NET1|10276|neuroepithelial cell transforming 1
hg18_v1_chr2_+_128565222_128565255	0.13556	ACAGUAU	NM_020120|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1	AK293066|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1	AK309101|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1	BC041098|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1
hg18_v1_chr2_-_37397669_37397725	0.133858	ACAGUAU	BC030706|PRKD3|23683|protein kinase D3	BC012820|PRKD3|23683|protein kinase D3	AB015982|PRKD3|23683|protein kinase D3	NM_005813|PRKD3|23683|protein kinase D3
hg18_v1_chr5_-_59100194_59100231	0.132689	ACAGUAU	NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr2_-_37752731_37753056	0.131167	ACAGUAU	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr15_-_81667169_81667668	0.13035	ACAGUAU	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr5_-_58331515_58331515	0.129151	ACAGUAU	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chrX_+_102517909_102517990	0.129038	ACAGUAU	CR605989|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_206915|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_206917|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1
hg18_v1_chrX_-_114374860_114374890	0.128458	ACAGUAU	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg18_v1_chrX_-_19898302_19898302	0.128064	ACAGUAU	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg18_v1_chr3_-_71715431_71715905	0.126685	ACAGUAU	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr13_-_36392370_36392408	0.125849	ACAGUAU	BC067766|SMAD9|4093|SMAD family member 9	NM_001127217|SMAD9|4093|SMAD family member 9	NM_005905|SMAD9|4093|SMAD family member 9
hg18_v1_chr4_+_38341982_38342461	0.123893	ACAGUAU	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr20_+_60898249_60898335	0.123501	ACAGUAU	AK001776|C20orf20|55257|chromosome 20 open reading frame 20	NM_018270|C20orf20|55257|chromosome 20 open reading frame 20	BC014235|C20orf20|55257|chromosome 20 open reading frame 20	BC009889|C20orf20|55257|chromosome 20 open reading frame 20	BC018841|C20orf20|55257|chromosome 20 open reading frame 20	AB085682|C20orf20|55257|chromosome 20 open reading frame 20
hg18_v1_chr7_+_115926679_115926679	0.122629	ACAGUAU	NM_001233|CAV2|858|caveolin 2	NM_198212|CAV2|858|caveolin 2
hg18_v1_chrX_-_33056464_33056465	0.122544	ACAGUAU	NM_004010|DMD|1756|dystrophin	S81419|DMD|1756|dystrophin	NM_004009|DMD|1756|dystrophin	S64152|DMD|1756|dystrophin
hg18_v1_chr13_+_40261546_40261632	0.122193	ACAGUAU	NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15	BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
hg18_v1_chr1_+_201286933_201286990	0.1221	ACAGUAU	AK126624|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	NM_015053|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	BC132923|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	BC132925|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	BC144262|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
hg18_v1_chr18_+_8707368_8707368	0.121802	ACAGUAU	AK131528|KIAA0802|23255|KIAA0802	NM_015210|KIAA0802|23255|KIAA0802
hg18_v1_chr5_+_141468498_141468566	0.121655	ACAGUAU	NM_030571|NDFIP1|80762|Nedd4 family interacting protein 1	AK315481|NDFIP1|80762|Nedd4 family interacting protein 1	AY192728|NDFIP1|80762|Nedd4 family interacting protein 1
hg18_v1_chr1_-_240754620_240754620	0.120445	ACAGUAU	AK098092|PLD5|200150|phospholipase D family, member 5	NM_152666|PLD5|200150|phospholipase D family, member 5
hg18_v1_chr20_-_32354736_32354875	0.119846	ACAGUAU	BT006697|AHCY|191|adenosylhomocysteinase	DQ890569|AHCY|191|adenosylhomocysteinase	DQ891701|AHCY|191|adenosylhomocysteinase	DQ893730|AHCY|191|adenosylhomocysteinase	DQ895397|AHCY|191|adenosylhomocysteinase	M61832|AHCY|191|adenosylhomocysteinase	M61831|AHCY|191|adenosylhomocysteinase	BC010018|AHCY|191|adenosylhomocysteinase	BC011606|AHCY|191|adenosylhomocysteinase	CR594678|AHCY|191|adenosylhomocysteinase	AK300014|AHCY|191|adenosylhomocysteinase	AK316180|AHCY|191|adenosylhomocysteinase	AK290422|AHCY|191|adenosylhomocysteinase	AK309204|AHCY|191|adenosylhomocysteinase	NM_000687|AHCY|191|adenosylhomocysteinase
hg18_v1_chr5_-_142795269_142795269	0.118721	ACAGUAU	NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr1_-_203916239_203916369	0.118597	ACAGUAU	AK313479|SLC45A3|85414|solute carrier family 45, member 3	AK290364|SLC45A3|85414|solute carrier family 45, member 3	NM_033102|SLC45A3|85414|solute carrier family 45, member 3
hg18_v1_chr14_-_51605695_51605775	0.118336	ACAGUAU	NM_007361|NID2|22795|nidogen 2 (osteonidogen)
hg18_v1_chr15_-_35179650_35180047	0.118243	ACAGUAU	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2	AK056216|MEIS2|4212|Meis homeobox 2
hg18_v1_chr8_-_119703361_119703416	0.116488	ACAGUAU	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12	NM_207506|SAMD12|401474|sterile alpha motif domain containing 12	AK311704|SAMD12|401474|sterile alpha motif domain containing 12
hg18_v1_chr8_-_75396016_75396150	0.115743	ACAGUAU	BX537756|JPH1|56704|junctophilin 1	BC139832|JPH1|56704|junctophilin 1	BC098299|JPH1|56704|junctophilin 1	BC098314|JPH1|56704|junctophilin 1	BC099736|JPH1|56704|junctophilin 1	BC113856|JPH1|56704|junctophilin 1	BC114464|JPH1|56704|junctophilin 1	NM_020647|JPH1|56704|junctophilin 1	BC140875|JPH1|56704|junctophilin 1	BC140876|JPH1|56704|junctophilin 1
hg18_v1_chr3_+_69895310_69895396	0.115063	ACAGUAU	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr18_-_12646730_12646730	0.114943	ACAGUAU	AK301711|SPIRE1|56907|spire homolog 1 (Drosophila)	NM_001128627|SPIRE1|56907|spire homolog 1 (Drosophila)
hg18_v1_chr3_-_188946168_188946206	0.113235	ACAGUAU	U00115|BCL6|604|B-cell CLL/lymphoma 6	NM_001706|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr17_+_4972410_4972410	0.112914	ACAGUAU	AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)	NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)	X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)	X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg18_v1_chr11_-_34489693_34489921	0.112645	ACAGUAU	AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)	AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)	NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)
hg18_v1_chr8_+_67787444_67787549	0.111642	ACAGUAU	NM_001033578|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3	CR933673|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3
hg18_v1_chr20_-_47963682_47963682	0.111398	ACAGUAU	AK289644|SPATA2|9825|spermatogenesis associated 2	NM_001135773|SPATA2|9825|spermatogenesis associated 2
hg18_v1_chr17_-_8474733_8474809	0.110093	ACAGUAU	M69181|MYH10|4628|myosin, heavy chain 10, non-muscle	AB210026|MYH10|4628|myosin, heavy chain 10, non-muscle	BC144668|MYH10|4628|myosin, heavy chain 10, non-muscle	BC150634|MYH10|4628|myosin, heavy chain 10, non-muscle	NM_005964|MYH10|4628|myosin, heavy chain 10, non-muscle	U34304|MYH10|4628|myosin, heavy chain 10, non-muscle
hg18_v1_chr13_-_76499297_76499367	0.107648	ACAGUAU	AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3	NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3
hg18_v1_chr9_+_127550298_127550298	0.107325	ACAGUAU	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3	NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3
hg18_v1_chr13_-_73605914_73606066	0.106564	ACAGUAU	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr20_-_47238310_47238330	0.105967	ACAGUAU	AF061938|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	AF061939|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	AF061940|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	AF061941|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	AY546099|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	NM_001037328|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	NM_004602|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	NM_017452|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	NM_017453|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	NM_017454|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)
hg18_v1_chrX_-_131401319_131401398	0.105949	ACAGUAU	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr10_+_133768302_133768302	0.105458	ACAGUAU	NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3
hg18_v1_chr17_+_58440629_58440629	0.104423	ACAGUAU	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr20_-_60963390_60963612	0.104389	ACAGUAU	AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)	AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)	BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)	BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)	NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)
hg18_v1_chr7_-_139123906_139124843	0.103771	ACAGUAU	AF208291|HIPK2|28996|homeodomain interacting protein kinase 2	AF326592|HIPK2|28996|homeodomain interacting protein kinase 2	NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2	NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2
hg18_v1_chr7_-_112513379_112514084	0.103605	ACAGUAU	AK297464|GPR85|54329|G protein-coupled receptor 85	AK312587|GPR85|54329|G protein-coupled receptor 85	NM_001146266|GPR85|54329|G protein-coupled receptor 85	AL161959|GPR85|54329|G protein-coupled receptor 85	NM_001146267|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr22_+_31526801_31526801	0.103555	ACAGUAU	NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3
hg18_v1_chr4_+_106287391_106287528	0.10346	ACAGUAU	NM_001127208|TET2|54790|tet oncogene family member 2	NM_017628|TET2|54790|tet oncogene family member 2	AK055149|TET2|54790|tet oncogene family member 2	BC150180|TET2|54790|tet oncogene family member 2	BC150201|TET2|54790|tet oncogene family member 2
hg18_v1_chr10_+_112247614_112247868	0.103042	ACAGUAU	NM_004419|DUSP5|1847|dual specificity phosphatase 5	CR595355|DUSP5|1847|dual specificity phosphatase 5	U15932|DUSP5|1847|dual specificity phosphatase 5	AB209823|DUSP5|1847|dual specificity phosphatase 5	BC062545|DUSP5|1847|dual specificity phosphatase 5	U16996|DUSP5|1847|dual specificity phosphatase 5	EU831449|DUSP5|1847|dual specificity phosphatase 5	EU831536|DUSP5|1847|dual specificity phosphatase 5
hg18_v1_chr13_-_76358433_76358783	0.101577	ACAGUAU	AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12	AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12	NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12
hg18_v1_chrX_-_119593646_119593711	0.0994549	ACAGUAU	AK315037|CUL4B|8450|cullin 4B	BC036216|CUL4B|8450|cullin 4B	NM_003588|CUL4B|8450|cullin 4B
hg18_v1_chr4_-_86106567_86106567	0.0990763	ACAGUAU	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg18_v1_chr1_+_82038669_82038669	0.0989355	ACAGUAU	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg18_v1_chr16_-_73198515_73198542	0.0986304	ACAGUAU	NM_001145666|GLG1|2734|golgi glycoprotein 1	NM_001145667|GLG1|2734|golgi glycoprotein 1	NM_012201|GLG1|2734|golgi glycoprotein 1
hg18_v1_chr20_-_51633042_51633042	0.0983527	ACAGUAU	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg18_v1_chr12_-_52356375_52356375	0.097585	ACAGUAU	NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
hg18_v1_chr20_-_4930133_4930188	0.0965366	ACAGUAU	D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2
hg18_v1_chr12_-_120218926_120219091	0.0956594	ACAGUAU	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr10_-_126839056_126839157	0.0949726	ACAGUAU	BC052276|CTBP2|1488|C-terminal binding protein 2	AL833398|CTBP2|1488|C-terminal binding protein 2	BC002486|CTBP2|1488|C-terminal binding protein 2	NM_001329|CTBP2|1488|C-terminal binding protein 2
hg18_v1_chr18_-_71268576_71268645	0.0946582	ACAGUAU	BC105945|C18orf62|284274|chromosome 18 open reading frame 62	BC107486|C18orf62|284274|chromosome 18 open reading frame 62	NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62	BC037871|C18orf62|284274|chromosome 18 open reading frame 62	AK093452|C18orf62|284274|chromosome 18 open reading frame 62
hg18_v1_chr9_-_16860719_16860813	0.0945821	ACAGUAU	CR933649|BNC2|54796|basonuclin 2	AK299073|BNC2|54796|basonuclin 2	NM_017637|BNC2|54796|basonuclin 2
hg18_v1_chr10_+_8136639_8136672	0.0935203	ACAGUAU	BC006793|GATA3|2625|GATA binding protein 3	NM_001002295|GATA3|2625|GATA binding protein 3	NM_002051|GATA3|2625|GATA binding protein 3
hg18_v1_chr17_+_33761234_33761544	0.0929998	ACAGUAU	NM_014598|SOCS7|30837|suppressor of cytokine signaling 7	BC121030|SOCS7|30837|suppressor of cytokine signaling 7	BC121031|SOCS7|30837|suppressor of cytokine signaling 7	BC128607|SOCS7|30837|suppressor of cytokine signaling 7
hg18_v1_chr2_-_174821530_174821631	0.0927321	ACAGUAU	AF078859|OLA1|29789|Obg-like ATPase 1	AL833441|OLA1|29789|Obg-like ATPase 1	AK225138|OLA1|29789|Obg-like ATPase 1	AK074710|OLA1|29789|Obg-like ATPase 1	AK027523|OLA1|29789|Obg-like ATPase 1	CR618778|OLA1|29789|Obg-like ATPase 1	BC012842|OLA1|29789|Obg-like ATPase 1	NM_001011708|OLA1|29789|Obg-like ATPase 1	NM_013341|OLA1|29789|Obg-like ATPase 1
hg18_v1_chr21_-_35182842_35182860	0.0925026	ACAGUAU	BC050363|RUNX1|861|runt-related transcription factor 1	X79549|RUNX1|861|runt-related transcription factor 1	D43967|RUNX1|861|runt-related transcription factor 1	D43968|RUNX1|861|runt-related transcription factor 1	NM_001001890|RUNX1|861|runt-related transcription factor 1	NM_001122607|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr9_-_14304036_14304145	0.0919176	ACAGUAU	BX648845|NFIB|4781|nuclear factor I/B	NM_001190737|NFIB|4781|nuclear factor I/B	NM_005596|NFIB|4781|nuclear factor I/B
hg18_v1_chr15_+_97990705_97990879	0.0917813	ACAGUAU	NM_001130928|MEF2A|4205|myocyte enhancer factor 2A	BC053871|MEF2A|4205|myocyte enhancer factor 2A	AM392739|MEF2A|4205|myocyte enhancer factor 2A	AM393856|MEF2A|4205|myocyte enhancer factor 2A	EU446488|MEF2A|4205|myocyte enhancer factor 2A
hg18_v1_chr17_+_45488330_45488350	0.0915441	ACAGUAU	AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)	AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)	NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)	NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
hg18_v1_chr2_-_179380301_179380396	0.0913021	ACAGUAU	X90568|TTN|7273|titin	BC013396|TTN|7273|titin	AK056602|TTN|7273|titin	BC029400|TTN|7273|titin	BC058824|TTN|7273|titin	BC070170|TTN|7273|titin	NM_003319|TTN|7273|titin	NM_133378|TTN|7273|titin	NM_133379|TTN|7273|titin	NM_133432|TTN|7273|titin	NM_133437|TTN|7273|titin
hg18_v1_chr3_+_69895651_69895651	0.0909673	ACAGUAU	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr1_-_21489235_21489355	0.0899491	ACAGUAU	AB031742|ECE1|1889|endothelin converting enzyme 1	AJ130828|ECE1|1889|endothelin converting enzyme 1	AK304167|ECE1|1889|endothelin converting enzyme 1	NM_001113349|ECE1|1889|endothelin converting enzyme 1
hg18_v1_chr3_+_37878647_37878694	0.0898105	ACAGUAU	AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg18_v1_chr2_+_54536780_54537452	0.0893296	ACAGUAU	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chrX_-_123925343_123925346	0.0893065	ACAGUAU	BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)
hg18_v1_chr6_+_17390273_17390273	0.0889615	ACAGUAU	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr7_+_20337249_20337270	0.0880541	ACAGUAU	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr1_-_47468029_47468029	0.0880019	ACAGUAU	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg18_v1_chr16_-_71639670_71639774	0.0876697	ACAGUAU	L32832|ZFHX3|463|zinc finger homeobox 3	NM_006885|ZFHX3|463|zinc finger homeobox 3
hg18_v1_chr11_-_27450808_27450952	0.086359	ACAGUAU	AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4	AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4	BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4	NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4
hg18_v1_chrX_-_134883798_134883853	0.0861972	ACAGUAU	AL157477|MMGT1|93380|membrane magnesium transporter 1	BC033588|MMGT1|93380|membrane magnesium transporter 1	NM_173470|MMGT1|93380|membrane magnesium transporter 1	AK312409|MMGT1|93380|membrane magnesium transporter 1	AK295829|MMGT1|93380|membrane magnesium transporter 1
hg18_v1_chr7_-_32897934_32898018	0.0853943	ACAGUAU	NM_015483|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2
hg18_v1_chr7_-_13997389_13997398	0.0853924	ACAGUAU	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg18_v1_chr7_+_7974941_7974976	0.0846623	ACAGUAU	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1	BC050291|GLCCI1|113263|glucocorticoid induced transcript 1
hg18_v1_chr15_-_35178888_35178974	0.08454	ACAGUAU	AK056620|MEIS2|4212|Meis homeobox 2	NM_172316|MEIS2|4212|Meis homeobox 2	EU446635|MEIS2|4212|Meis homeobox 2	EU831824|MEIS2|4212|Meis homeobox 2	AK055936|MEIS2|4212|Meis homeobox 2
hg18_v1_chr6_+_17389752_17389914	0.0839766	ACAGUAU	AK095016|RBM24|221662|RNA binding motif protein 24	AK293052|RBM24|221662|RNA binding motif protein 24	AK315856|RBM24|221662|RNA binding motif protein 24	NM_001143942|RBM24|221662|RNA binding motif protein 24	AY547318|RBM24|221662|RNA binding motif protein 24	AK129865|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr8_-_13035102_13035193	0.0833594	ACAGUAU	AK289734|DLC1|10395|deleted in liver cancer 1	DQ092382|DLC1|10395|deleted in liver cancer 1	AF026219|DLC1|10395|deleted in liver cancer 1	BC095415|DLC1|10395|deleted in liver cancer 1	NM_006094|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr1_-_21489475_21489568	0.0832757	ACAGUAU	Z35307|ECE1|1889|endothelin converting enzyme 1	D49471|ECE1|1889|endothelin converting enzyme 1	AK290656|ECE1|1889|endothelin converting enzyme 1	AK309677|ECE1|1889|endothelin converting enzyme 1	AK296486|ECE1|1889|endothelin converting enzyme 1	BC117256|ECE1|1889|endothelin converting enzyme 1	BC126257|ECE1|1889|endothelin converting enzyme 1	NM_001397|ECE1|1889|endothelin converting enzyme 1
hg18_v1_chr10_-_921694_921701	0.0830478	ACAGUAU	BC131630|LARP4B|23185|La ribonucleoprotein domain family, member 4B	BC152443|LARP4B|23185|La ribonucleoprotein domain family, member 4B	D86971|LARP4B|23185|La ribonucleoprotein domain family, member 4B	NM_015155|LARP4B|23185|La ribonucleoprotein domain family, member 4B
hg18_v1_chr15_-_46725087_46725356	0.0822507	ACAGUAU	BC146854|FBN1|2200|fibrillin 1	AK304737|FBN1|2200|fibrillin 1	BC094721|FBN1|2200|fibrillin 1	NM_000138|FBN1|2200|fibrillin 1	X63556|FBN1|2200|fibrillin 1
hg18_v1_chr20_-_48163071_48163123	0.0813822	ACAGUAU	BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR604443|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR624783|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR615402|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1
hg18_v1_chr2_-_113752957_113752969	0.0813013	ACAGUAU	S77904|PAX8|7849|paired box 8	S77905|PAX8|7849|paired box 8	S77906|PAX8|7849|paired box 8	X69699|PAX8|7849|paired box 8	BC001060|PAX8|7849|paired box 8	AK292191|PAX8|7849|paired box 8	AK309154|PAX8|7849|paired box 8	AK225538|PAX8|7849|paired box 8	NM_003466|PAX8|7849|paired box 8	NM_013952|PAX8|7849|paired box 8	NM_013953|PAX8|7849|paired box 8	NM_013992|PAX8|7849|paired box 8
hg18_v1_chr16_-_71650034_71650141	0.0811259	ACAGUAU	D10250|ZFHX3|463|zinc finger homeobox 3	NM_001164766|ZFHX3|463|zinc finger homeobox 3
hg18_v1_chr16_+_11669736_11669862	0.0811175	ACAGUAU	NM_003498|SNN|8303|stannin	BC036100|SNN|8303|stannin	BC036443|SNN|8303|stannin	AL161976|SNN|8303|stannin	AF030196|SNN|8303|stannin
hg18_v1_chr1_+_165456572_165456790	0.0809873	ACAGUAU	NM_001198786|POU2F1|5451|POU class 2 homeobox 1	NM_002697|POU2F1|5451|POU class 2 homeobox 1	AK302525|POU2F1|5451|POU class 2 homeobox 1	AK303201|POU2F1|5451|POU class 2 homeobox 1	AK308004|POU2F1|5451|POU class 2 homeobox 1	AK091438|POU2F1|5451|POU class 2 homeobox 1	BC052274|POU2F1|5451|POU class 2 homeobox 1	X13403|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr18_-_12647911_12648064	0.0802916	ACAGUAU	NM_001128626|SPIRE1|56907|spire homolog 1 (Drosophila)	NM_020148|SPIRE1|56907|spire homolog 1 (Drosophila)	AB032961|SPIRE1|56907|spire homolog 1 (Drosophila)
hg18_v1_chr6_+_17390910_17391056	0.0800291	ACAGUAU	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr6_+_37895244_37895293	0.0790662	ACAGUAU	NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3
hg18_v1_chr15_+_45797977_45797977	0.0782596	ACAGUAU	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg18_v1_chr12_-_41164052_41164081	0.0782045	ACAGUAU	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr14_+_31616196_31616318	0.077111	ACAGUAU	NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5	NM_001173|ARHGAP5|394|Rho GTPase activating protein 5	U17032|ARHGAP5|394|Rho GTPase activating protein 5	BC129928|ARHGAP5|394|Rho GTPase activating protein 5	BC129929|ARHGAP5|394|Rho GTPase activating protein 5
hg18_v1_chr8_+_76059262_76059666	0.0761188	ACAGUAU	NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1	AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1	BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1	AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1	AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1	AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1
hg18_v1_chr2_-_127679812_127679812	0.0754897	ACAGUAU	BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1
hg18_v1_chr11_+_109469296_109469385	0.0753856	ACAGUAU	NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C	AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C
hg18_v1_chr21_+_37714470_37714511	0.0737789	ACAGUAU	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr16_+_80036275_80036394	0.073174	ACAGUAU	NM_198390|CMIP|80790|c-Maf-inducing protein	AK096598|CMIP|80790|c-Maf-inducing protein	AB051481|CMIP|80790|c-Maf-inducing protein
hg18_v1_chr15_-_73530829_73531081	0.073145	ACAGUAU	BC137098|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	BC137099|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	AF418569|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	AK027559|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	NM_015477|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	BC066364|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	BX649162|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)
hg18_v1_chr8_+_79590890_79590890	0.0726974	ACAGUAU	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chrX_-_131179598_131179884	0.0723559	ACAGUAU	BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family	AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family	NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family
hg18_v1_chr16_+_27468942_27468988	0.0717987	ACAGUAU	NM_015202|KIAA0556|23247|KIAA0556	AB011128|KIAA0556|23247|KIAA0556	BC150276|KIAA0556|23247|KIAA0556	BC131508|KIAA0556|23247|KIAA0556
hg18_v1_chr5_-_171366481_171366481	0.0717616	ACAGUAU	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11	NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11	NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11	NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11
hg18_v1_chr3_+_69998064_69998119	0.0714991	ACAGUAU	NM_198177|MITF|4286|microphthalmia-associated transcription factor	AK297858|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr6_+_150962691_150962735	0.0709044	ACAGUAU	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
hg18_v1_chr12_-_109665113_109665143	0.0704997	ACAGUAU	NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme
hg18_v1_chr7_-_139523187_139523475	0.0703707	ACAGUAU	AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)	NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)
hg18_v1_chr7_-_13997574_13997574	0.069187	ACAGUAU	NM_001163148|ETV1|2115|ets variant 1
hg18_v1_chr7_+_97574054_97574491	0.068189	ACAGUAU	AB029002|LMTK2|22853|lemur tyrosine kinase 2	BC146773|LMTK2|22853|lemur tyrosine kinase 2	NM_014916|LMTK2|22853|lemur tyrosine kinase 2	BC131504|LMTK2|22853|lemur tyrosine kinase 2	AY130988|LMTK2|22853|lemur tyrosine kinase 2
hg18_v1_chrX_+_102518764_102518764	0.0675983	ACAGUAU	AF187064|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1	M38188|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_014380|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1
hg18_v1_chr5_+_176492662_176492685	0.0671021	ACAGUAU	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr3_+_50687675_50687698	0.0670486	ACAGUAU	AY254099|DOCK3|1795|dedicator of cytokinesis 3	NM_004947|DOCK3|1795|dedicator of cytokinesis 3	AY145303|DOCK3|1795|dedicator of cytokinesis 3
hg18_v1_chr16_-_19440786_19440969	0.06653	ACAGUAU	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR624901|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR590251|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605351|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR607083|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605785|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR612471|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR591783|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR620034|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg18_v1_chr4_-_129429433_129429433	0.0654749	ACAGUAU	AK131272|PGRMC2|10424|progesterone receptor membrane component 2	NM_006320|PGRMC2|10424|progesterone receptor membrane component 2
hg18_v1_chr11_-_16454493_16454510	0.0651985	ACAGUAU	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr9_-_97310142_97310142	0.0648367	ACAGUAU	AB189438|PTCH1|5727|patched 1	AB189439|PTCH1|5727|patched 1	NM_001083604|PTCH1|5727|patched 1	NM_001083605|PTCH1|5727|patched 1
hg18_v1_chr2_+_135392857_135392877	0.0641645	ACAGUAU	AK294889|CCNT2|905|cyclin T2	AF048731|CCNT2|905|cyclin T2	NM_001241|CCNT2|905|cyclin T2	NM_058241|CCNT2|905|cyclin T2	AK292913|CCNT2|905|cyclin T2	BC114366|CCNT2|905|cyclin T2
hg18_v1_chr2_-_177836773_177836862	0.0629943	ACAGUAU	AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2
hg18_v1_chr1_+_110494654_110494661	0.0626332	ACAGUAU	NM_001010898|SLC6A17|388662|solute carrier family 6, member 17	AK289982|SLC6A17|388662|solute carrier family 6, member 17
hg18_v1_chr17_-_57497380_57497438	0.0624571	ACAGUAU	BC140891|MED13|9969|mediator complex subunit 13	AF117754|MED13|9969|mediator complex subunit 13	NM_005121|MED13|9969|mediator complex subunit 13
hg18_v1_chr16_+_48616593_48616690	0.0620307	ACAGUAU	AK095420|TMEM188|255919|transmembrane protein 188	AK301610|TMEM188|255919|transmembrane protein 188	BC022550|TMEM188|255919|transmembrane protein 188	CR933600|TMEM188|255919|transmembrane protein 188	AK307309|TMEM188|255919|transmembrane protein 188	BC036683|TMEM188|255919|transmembrane protein 188	FJ516381|TMEM188|255919|transmembrane protein 188	NM_153261|TMEM188|255919|transmembrane protein 188
hg18_v1_chr20_+_35406497_35406517	0.0619796	ACAGUAU	AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg18_v1_chr16_+_64958025_64958043	0.0618311	ACAGUAU	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg18_v1_chr4_+_174326464_174326591	0.0612246	ACAGUAU	NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg18_v1_chrX_-_31436335_31436335	0.0612201	ACAGUAU	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg18_v1_chr1_-_172228673_172228832	0.060796	ACAGUAU	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr17_+_19081267_19081336	0.0603775	ACAGUAU	NM_001102664|EPN2|22905|epsin 2	NM_014964|EPN2|22905|epsin 2	NM_148921|EPN2|22905|epsin 2	AK092366|EPN2|22905|epsin 2	AK024115|EPN2|22905|epsin 2	AB028988|EPN2|22905|epsin 2	BC070036|EPN2|22905|epsin 2	AK295652|EPN2|22905|epsin 2	AK298006|EPN2|22905|epsin 2	AK307455|EPN2|22905|epsin 2	BC015488|EPN2|22905|epsin 2
hg18_v1_chr20_-_4938913_4938938	0.059787	ACAGUAU	BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2
hg18_v1_chr1_+_168899936_168900037	0.059178	ACAGUAU	BC074993|PRRX1|5396|paired related homeobox 1	NM_006902|PRRX1|5396|paired related homeobox 1	NM_022716|PRRX1|5396|paired related homeobox 1	EU446648|PRRX1|5396|paired related homeobox 1	AB451463|PRRX1|5396|paired related homeobox 1
hg18_v1_chr3_+_88270951_88270951	0.058395	ACAGUAU	AF543494|ZNF654|55279|zinc finger protein 654	NM_018293|ZNF654|55279|zinc finger protein 654
hg18_v1_chr17_-_76064842_76065003	0.0571657	ACAGUAU	EU831771|NPTX1|4884|neuronal pentraxin I	EU831849|NPTX1|4884|neuronal pentraxin I	BC089441|NPTX1|4884|neuronal pentraxin I	U61849|NPTX1|4884|neuronal pentraxin I	AK127335|NPTX1|4884|neuronal pentraxin I	NM_002522|NPTX1|4884|neuronal pentraxin I
hg18_v1_chr16_+_8799170_8799228	0.0570897	ACAGUAU	NM_000303|PMM2|5373|phosphomannomutase 2	U85773|PMM2|5373|phosphomannomutase 2	AK300785|PMM2|5373|phosphomannomutase 2	AK291537|PMM2|5373|phosphomannomutase 2	AK299979|PMM2|5373|phosphomannomutase 2	AK311035|PMM2|5373|phosphomannomutase 2	AK312532|PMM2|5373|phosphomannomutase 2	AK304320|PMM2|5373|phosphomannomutase 2	AK296630|PMM2|5373|phosphomannomutase 2	BC008310|PMM2|5373|phosphomannomutase 2
hg18_v1_chr8_-_42516205_42516231	0.0560047	ACAGUAU	BC028600|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2	NM_006749|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2
hg18_v1_chr3_+_153499883_153499883	0.0555119	ACAGUAU	NM_207293|MBNL1|4154|muscleblind-like (Drosophila)	NM_207294|MBNL1|4154|muscleblind-like (Drosophila)	NM_207295|MBNL1|4154|muscleblind-like (Drosophila)	NM_207296|MBNL1|4154|muscleblind-like (Drosophila)	NM_207297|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr20_+_32755778_32755951	0.0553676	ACAGUAU	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2	BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2
hg18_v1_chrX_+_133334965_133335121	0.0543385	ACAGUAU	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr9_+_111582317_111582556	0.0542408	ACAGUAU	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_053016|PALM2|114299|paralemmin 2	NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ312216|PALM2|114299|paralemmin 2	AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough
hg18_v1_chrX_+_118598325_118598325	0.0536576	ACAGUAU	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)
hg18_v1_chr5_+_65476418_65476418	0.0535363	ACAGUAU	BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1	NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1
hg18_v1_chrX_-_40479718_40479747	0.053229	ACAGUAU	AB006651|MED14|9282|mediator complex subunit 14	AF304448|MED14|9282|mediator complex subunit 14	BC098377|MED14|9282|mediator complex subunit 14	NM_004229|MED14|9282|mediator complex subunit 14
hg18_v1_chr15_-_35177664_35177794	0.0531983	ACAGUAU	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg18_v1_chr18_-_27777085_27777128	0.0525683	ACAGUAU	NM_014939|TRAPPC8|22878|trafficking protein particle complex 8	AL136749|TRAPPC8|22878|trafficking protein particle complex 8
hg18_v1_chr8_+_26204921_26204955	0.0522279	ACAGUAU	NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha
hg18_v1_chr1_-_243094431_243094463	0.0521561	ACAGUAU	AF068846|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)	NM_004501|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)	NM_031844|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg18_v1_chr2_-_189752575_189752849	0.0517534	ACAGUAU	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg18_v1_chr16_-_69277355_69277507	0.0517452	ACAGUAU	NM_138383|MTSS1L|92154|metastasis suppressor 1-like
hg18_v1_chr12_-_41163680_41163687	0.0516275	ACAGUAU	AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr6_+_126153693_126153737	0.0514969	ACAGUAU	NM_001122842|NCOA7|135112|nuclear receptor coactivator 7	NM_181782|NCOA7|135112|nuclear receptor coactivator 7
hg18_v1_chr20_+_5879297_5879669	0.0511822	ACAGUAU	AJ439063|MCM8|84515|minichromosome maintenance complex component 8	NM_032485|MCM8|84515|minichromosome maintenance complex component 8	NM_182802|MCM8|84515|minichromosome maintenance complex component 8	AK297806|MCM8|84515|minichromosome maintenance complex component 8	BC101054|MCM8|84515|minichromosome maintenance complex component 8	BC101055|MCM8|84515|minichromosome maintenance complex component 8	BC101056|MCM8|84515|minichromosome maintenance complex component 8	BC101057|MCM8|84515|minichromosome maintenance complex component 8	BC080656|MCM8|84515|minichromosome maintenance complex component 8	AY158211|MCM8|84515|minichromosome maintenance complex component 8	BC005170|MCM8|84515|minichromosome maintenance complex component 8	AK314654|MCM8|84515|minichromosome maintenance complex component 8
hg18_v1_chr3_-_52694554_52695065	0.0510259	ACAGUAU	AF197569|PBRM1|55193|polybromo 1	NM_018313|PBRM1|55193|polybromo 1
hg18_v1_chr5_-_40834006_40834053	0.0506179	ACAGUAU	CR616720|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AF100763|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	BC012622|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK312947|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK307546|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	BC037303|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AB022017|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	NM_006251|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	NM_206907|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg18_v1_chr11_+_16716723_16716749	0.0501412	ACAGUAU	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr2_-_40510923_40510947	0.0499209	ACAGUAU	AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1
hg18_v1_chr6_+_89847019_89847181	0.0490221	ACAGUAU	CR618392|PNRC1|10957|proline-rich nuclear receptor coactivator 1	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr15_+_36332258_36332370	0.0490137	ACAGUAU	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1	AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr1_-_31311140_31311218	0.0481917	ACAGUAU	NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)	NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)	AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr2_-_217268492_217268518	0.0476335	ACAGUAU	AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5	NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5
hg18_v1_chr15_+_94676691_94676797	0.0474253	ACAGUAU	CR601286|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr21_+_37713076_37713076	0.047198	ACAGUAU	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr2_+_118288724_118288752	0.0469524	ACAGUAU	NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
hg18_v1_chr2_-_179051471_179051600	0.046848	ACAGUAU	AY353086|FKBP7|51661|FK506 binding protein 7	BT007122|FKBP7|51661|FK506 binding protein 7	EU831809|FKBP7|51661|FK506 binding protein 7	EU831886|FKBP7|51661|FK506 binding protein 7	AY359015|FKBP7|51661|FK506 binding protein 7	BC009711|FKBP7|51661|FK506 binding protein 7	AK292145|FKBP7|51661|FK506 binding protein 7	AK299215|FKBP7|51661|FK506 binding protein 7	NM_001135212|FKBP7|51661|FK506 binding protein 7	NM_181342|FKBP7|51661|FK506 binding protein 7
hg18_v1_chr9_-_36390212_36390295	0.0461997	ACAGUAU	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chr22_+_18124225_18124225	0.0460827	ACAGUAU	AF012130|TBX1|6899|T-box 1	AF012131|TBX1|6899|T-box 1	AF373867|TBX1|6899|T-box 1	NM_005992|TBX1|6899|T-box 1	NM_080646|TBX1|6899|T-box 1	NM_080647|TBX1|6899|T-box 1
hg18_v1_chr11_+_75833707_75833795	0.0460463	ACAGUAU	AK304043|C11orf30|56946|chromosome 11 open reading frame 30	BC033404|C11orf30|56946|chromosome 11 open reading frame 30	NM_020193|C11orf30|56946|chromosome 11 open reading frame 30	AK309621|C11orf30|56946|chromosome 11 open reading frame 30	BC021688|C11orf30|56946|chromosome 11 open reading frame 30	AK125114|C11orf30|56946|chromosome 11 open reading frame 30
hg18_v1_chrX_-_76928334_76928430	0.0455738	ACAGUAU	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr5_+_72148173_72148320	0.0450474	ACAGUAU	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg18_v1_chr1_+_165564904_165564941	0.044997	ACAGUAU	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr3_+_171167243_171167321	0.0448927	ACAGUAU	NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)	CR618317|SEC62|7095|SEC62 homolog (S. cerevisiae)	BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)	BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)	D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)	U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)	EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)	EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)
hg18_v1_chr8_-_13416554_13416799	0.0447742	ACAGUAU	BC054511|DLC1|10395|deleted in liver cancer 1	AK291682|DLC1|10395|deleted in liver cancer 1	AK024773|DLC1|10395|deleted in liver cancer 1	AK225098|DLC1|10395|deleted in liver cancer 1	AB051510|DLC1|10395|deleted in liver cancer 1	BC049842|DLC1|10395|deleted in liver cancer 1	NM_024767|DLC1|10395|deleted in liver cancer 1	NM_182643|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr11_+_129444877_129444972	0.0447688	ACAGUAU	NM_001142276|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001142277|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001142278|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001642|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr10_-_61570665_61570779	0.0442429	ACAGUAU	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr4_+_183482130_183482130	0.0442038	ACAGUAU	NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)
hg18_v1_chr16_-_56077827_56077946	0.0439864	ACAGUAU	BC003541|DOK4|55715|docking protein 4	NM_018110|DOK4|55715|docking protein 4	AK001350|DOK4|55715|docking protein 4
hg18_v1_chr5_+_138920893_138921021	0.0439321	ACAGUAU	BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)	NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)	NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)	BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)
hg18_v1_chr15_+_75010997_75011258	0.0439012	ACAGUAU	NM_002902|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR616801|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	AK313833|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR596465|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR626289|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR597519|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR597585|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR595477|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR613525|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR615949|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR614496|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	X78669|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR613141|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	BC004892|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR596223|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR610299|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR617037|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR596401|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	CR599064|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	BT009790|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain
hg18_v1_chr20_-_14266200_14266312	0.0436547	ACAGUAU	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg18_v1_chr15_-_54073024_54073151	0.0436044	ACAGUAU	BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg18_v1_chr15_-_32289561_32289626	0.0426552	ACAGUAU	BC037234|C15orf29|79768|chromosome 15 open reading frame 29	AL833631|C15orf29|79768|chromosome 15 open reading frame 29	AK293695|C15orf29|79768|chromosome 15 open reading frame 29	AK311338|C15orf29|79768|chromosome 15 open reading frame 29	NM_024713|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr6_+_7535404_7535513	0.0426435	ACAGUAU	AL832462|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	NM_152551|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	AK292409|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	AK056796|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC054008|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC114631|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC114630|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC062458|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)
hg18_v1_chr2_-_202354139_202354139	0.0423625	ACAGUAU	NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)	NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)
hg18_v1_chrX_-_32083506_32083506	0.0420706	ACAGUAU	L35854|DMD|1756|dystrophin	NM_004013|DMD|1756|dystrophin	NM_004020|DMD|1756|dystrophin	NM_004021|DMD|1756|dystrophin	NM_004022|DMD|1756|dystrophin	NM_004023|DMD|1756|dystrophin
hg18_v1_chr4_+_14613395_14613395	0.0416721	ACAGUAU	NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2
hg18_v1_chr9_-_97309301_97309301	0.0415991	ACAGUAU	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg18_v1_chr2_+_170392146_170392263	0.0415771	ACAGUAU	NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg18_v1_chr12_-_121946635_121946664	0.0410931	ACAGUAU	AK022812|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)	NM_024667|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)
hg18_v1_chr10_+_120779217_120779261	0.0409977	ACAGUAU	AF458985|NANOS1|340719|nanos homolog 1 (Drosophila)	NM_199461|NANOS1|340719|nanos homolog 1 (Drosophila)	AF275269|NANOS1|340719|nanos homolog 1 (Drosophila)
hg18_v1_chr8_+_126511739_126511783	0.0404561	ACAGUAU	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg18_v1_chr3_-_150903749_150903749	0.0400653	ACAGUAU	AK022036|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1
hg18_v1_chr3_+_70068440_70068563	0.0400579	ACAGUAU	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr12_+_13240868_13240943	0.0396696	ACAGUAU	NM_001423|EMP1|2012|epithelial membrane protein 1	U77085|EMP1|2012|epithelial membrane protein 1	AK310798|EMP1|2012|epithelial membrane protein 1	AK308505|EMP1|2012|epithelial membrane protein 1	BC047300|EMP1|2012|epithelial membrane protein 1
hg18_v1_chr3_+_122109716_122109795	0.0388059	ACAGUAU	NM_014980|STXBP5L|9515|syntaxin binding protein 5-like	AK296544|STXBP5L|9515|syntaxin binding protein 5-like	BC022029|STXBP5L|9515|syntaxin binding protein 5-like	AB023223|STXBP5L|9515|syntaxin binding protein 5-like
hg18_v1_chr2_-_213111525_213111596	0.0386411	ACAGUAU	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg18_v1_chr1_-_46957317_46957329	0.0383322	ACAGUAU	AB007963|KIAA0494|9813|KIAA0494	NM_014774|KIAA0494|9813|KIAA0494
hg18_v1_chr8_+_79740813_79740938	0.0382688	ACAGUAU	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg18_v1_chr15_+_90197884_90198010	0.0381813	ACAGUAU	NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1
hg18_v1_chr10_-_93992982_93993017	0.0381535	ACAGUAU	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg18_v1_chr22_-_36153449_36153499	0.0378969	ACAGUAU	NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg18_v1_chr3_-_56810869_56811034	0.0372344	ACAGUAU	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr9_-_124630630_124630755	0.0371593	ACAGUAU	BC017227|PDCL|5082|phosducin-like	CR623512|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	CR618226|PDCL|5082|phosducin-like	CR618655|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg18_v1_chr4_+_134289893_134289919	0.0370831	ACAGUAU	AB037821|PCDH10|57575|protocadherin 10	AY013874|PCDH10|57575|protocadherin 10	NM_020815|PCDH10|57575|protocadherin 10	NM_032961|PCDH10|57575|protocadherin 10
hg18_v1_chr2_-_25418249_25418358	0.0369312	ACAGUAU	AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	CR625891|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha
hg18_v1_chr14_+_72594940_72594984	0.0363572	ACAGUAU	BC062440|RBM25|58517|RNA binding motif protein 25	NM_021239|RBM25|58517|RNA binding motif protein 25
hg18_v1_chr6_-_116553918_116553988	0.0363385	ACAGUAU	BC130621|COL10A1|1300|collagen, type X, alpha 1	BC130623|COL10A1|1300|collagen, type X, alpha 1	NM_000493|COL10A1|1300|collagen, type X, alpha 1
hg18_v1_chr21_+_43267703_43267743	0.0362759	ACAGUAU	CR605067|PKNOX1|5316|PBX/knotted 1 homeobox 1	AY142115|PKNOX1|5316|PBX/knotted 1 homeobox 1	AY196965|PKNOX1|5316|PBX/knotted 1 homeobox 1	NM_004571|PKNOX1|5316|PBX/knotted 1 homeobox 1	CR614253|PKNOX1|5316|PBX/knotted 1 homeobox 1	CR603181|PKNOX1|5316|PBX/knotted 1 homeobox 1	CR591092|PKNOX1|5316|PBX/knotted 1 homeobox 1	BC000735|PKNOX1|5316|PBX/knotted 1 homeobox 1
hg18_v1_chr20_+_31541565_31541700	0.0360265	ACAGUAU	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr10_+_98582005_98582082	0.0359365	ACAGUAU	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr7_-_135312734_135312751	0.0357303	ACAGUAU	NM_001128619|LUZP6|767558|leucine zipper protein 6	NM_145808|MTPN|136319|myotrophin
hg18_v1_chr18_+_20260603_20260608	0.0356684	ACAGUAU	AK292533|IMPACT|55364|Impact homolog (mouse)	NM_018439|IMPACT|55364|Impact homolog (mouse)	BC036074|IMPACT|55364|Impact homolog (mouse)
hg18_v1_chr12_+_108636569_108636572	0.0353368	ACAGUAU	NM_032829|C12orf34|84915|chromosome 12 open reading frame 34	BC020193|C12orf34|84915|chromosome 12 open reading frame 34
hg18_v1_chr3_+_63928459_63928536	0.035335	ACAGUAU	NM_001128149|ATXN7|6314|ataxin 7	AK310745|ATXN7|6314|ataxin 7	AK304062|ATXN7|6314|ataxin 7
hg18_v1_chr9_-_97309507_97309535	0.0347336	ACAGUAU	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg18_v1_chr3_+_38470782_38470813	0.034477	ACAGUAU	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg18_v1_chr15_+_47502666_47502771	0.0344213	ACAGUAU	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr9_-_14388981_14388981	0.0342545	ACAGUAU	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr1_+_151873134_151873170	0.0341236	ACAGUAU	AF261137|C1orf77|26097|chromosome 1 open reading frame 77	NM_015607|C1orf77|26097|chromosome 1 open reading frame 77
hg18_v1_chr5_+_176493233_176493464	0.0339249	ACAGUAU	BC021961|NSD1|64324|nuclear receptor binding SET domain protein 1	NM_022455|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr3_+_4510030_4510033	0.0330835	ACAGUAU	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr3_-_137953876_137953934	0.0324358	ACAGUAU	BC040708|STAG1|10274|stromal antigen 1	AB210023|STAG1|10274|stromal antigen 1	AK309934|STAG1|10274|stromal antigen 1	BC064699|STAG1|10274|stromal antigen 1	CR749247|STAG1|10274|stromal antigen 1	NM_005862|STAG1|10274|stromal antigen 1
hg18_v1_chr7_-_148825829_148825833	0.0321496	ACAGUAU	NM_001163474|ZNF746|155061|zinc finger protein 746	NM_152557|ZNF746|155061|zinc finger protein 746	AK128244|ZNF746|155061|zinc finger protein 746
hg18_v1_chr16_+_24648446_24648553	0.0318315	ACAGUAU	NM_014494|TNRC6A|27327|trinucleotide repeat containing 6A
hg18_v1_chr10_-_99383165_99383333	0.0312962	ACAGUAU	AK289406|MORN4|118812|MORN repeat containing 4	DQ338435|MORN4|118812|MORN repeat containing 4	DQ338436|MORN4|118812|MORN repeat containing 4	AL834132|MORN4|118812|MORN repeat containing 4	BC022054|MORN4|118812|MORN repeat containing 4	BC093023|MORN4|118812|MORN repeat containing 4	AK098791|MORN4|118812|MORN repeat containing 4	AJ312050|MORN4|118812|MORN repeat containing 4	NM_178832|MORN4|118812|MORN repeat containing 4
hg18_v1_chr15_+_89279218_89279218	0.0312383	ACAGUAU	NM_018671|UNC45A|55898|unc-45 homolog A (C. elegans)
hg18_v1_chr4_+_56509793_56509903	0.0306918	ACAGUAU	AK023683|CEP135|9662|centrosomal protein 135kDa	NM_025009|CEP135|9662|centrosomal protein 135kDa	BC136535|CEP135|9662|centrosomal protein 135kDa	BC136536|CEP135|9662|centrosomal protein 135kDa
hg18_v1_chr12_+_94135645_94136005	0.0305014	ACAGUAU	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg18_v1_chr16_-_45735403_45735443	0.0294814	ACAGUAU	AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2	NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2
hg18_v1_chr1_+_65503011_65503024	0.02947	ACAGUAU	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6	AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6
hg18_v1_chr6_+_71434192_71434296	0.0291984	ACAGUAU	NM_001044305|SMAP1|60682|small ArfGAP 1	NM_021940|SMAP1|60682|small ArfGAP 1	AF442495|SMAP1|60682|small ArfGAP 1
hg18_v1_chr7_-_78920806_78920825	0.028935	ACAGUAU	AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg18_v1_chr20_+_34635362_34635469	0.0285683	ACAGUAU	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg18_v1_chr12_-_31635089_31635281	0.0284781	ACAGUAU	BC068580|DENND5B|160518|DENN/MADD domain containing 5B	NM_144973|DENND5B|160518|DENN/MADD domain containing 5B
hg18_v1_chr15_-_47235057_47235145	0.0279885	ACAGUAU	AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	CR614722|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	CR601131|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)	NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)
hg18_v1_chr10_+_94342789_94342804	0.0278356	ACAGUAU	NM_004523|KIF11|3832|kinesin family member 11
hg18_v1_chr1_+_164063276_164063515	0.027275	ACAGUAU	CR608443|UCK2|7371|uridine-cytidine kinase 2	NM_012474|UCK2|7371|uridine-cytidine kinase 2	BC002906|UCK2|7371|uridine-cytidine kinase 2
hg18_v1_chr5_+_65475760_65475873	0.0272228	ACAGUAU	NM_001077199|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1
hg18_v1_chr2_-_25328452_25328968	0.0268458	ACAGUAU	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha
hg18_v1_chrX_+_21767576_21767664	0.0265641	ACAGUAU	NM_015884|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2
hg18_v1_chr2_+_183289205_183289434	0.0260273	ACAGUAU	AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg18_v1_chr12_-_30721410_30721444	0.0257495	ACAGUAU	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr6_+_160068135_160068195	0.025505	ACAGUAU	CR602556|WTAP|9589|Wilms tumor 1 associated protein	AK290854|WTAP|9589|Wilms tumor 1 associated protein	AF374416|WTAP|9589|Wilms tumor 1 associated protein	NM_004906|WTAP|9589|Wilms tumor 1 associated protein	NM_152858|WTAP|9589|Wilms tumor 1 associated protein	BC000383|WTAP|9589|Wilms tumor 1 associated protein	BC004432|WTAP|9589|Wilms tumor 1 associated protein	BC069192|WTAP|9589|Wilms tumor 1 associated protein	CR610864|WTAP|9589|Wilms tumor 1 associated protein
hg18_v1_chr18_+_31488530_31488624	0.0254226	ACAGUAU	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)
hg18_v1_chr15_-_72775395_72775438	0.0254179	ACAGUAU	BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)
hg18_v1_chr8_+_17398940_17398977	0.0251059	ACAGUAU	NM_001008539|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	AK314287|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg18_v1_chr10_-_11693535_11693750	0.0250589	ACAGUAU	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr10_+_31648103_31648176	0.0249734	ACAGUAU	NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1	AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1	AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1	AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1	AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1	AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1	AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1	U12170|ZEB1|6935|zinc finger E-box binding homeobox 1	AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1	AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1	BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1	BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1	BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1	BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1	AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1
hg18_v1_chr10_-_17284075_17284075	0.0249517	ACAGUAU	NM_004412|TRDMT1|1787|tRNA aspartic acid methyltransferase 1
hg18_v1_chrX_+_44617346_44617414	0.0245175	ACAGUAU	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg18_v1_chr8_-_13018123_13018123	0.024434	ACAGUAU	AK299049|DLC1|10395|deleted in liver cancer 1	NM_001164271|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr14_+_99017485_99017540	0.0239338	ACAGUAU	NM_001099402|CCNK|8812|cyclin K	BC015935|CCNK|8812|cyclin K	AK311075|CCNK|8812|cyclin K
hg18_v1_chr3_+_108724472_108724606	0.0238685	ACAGUAU	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)	NM_020235|BBX|56987|bobby sox homolog (Drosophila)	AF283775|BBX|56987|bobby sox homolog (Drosophila)	AF454941|BBX|56987|bobby sox homolog (Drosophila)	AF161457|BBX|56987|bobby sox homolog (Drosophila)	AK314434|BBX|56987|bobby sox homolog (Drosophila)	AK057010|BBX|56987|bobby sox homolog (Drosophila)	AK291757|BBX|56987|bobby sox homolog (Drosophila)	AF276949|BBX|56987|bobby sox homolog (Drosophila)	BC131718|BBX|56987|bobby sox homolog (Drosophila)
hg18_v1_chr15_+_22652790_22652823	0.0238003	ACAGUAU	L80004|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_022805|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AK222633|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC035280|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr15_+_89274413_89274413	0.0237772	ACAGUAU	AK125721|UNC45A|55898|unc-45 homolog A (C. elegans)	BC045635|UNC45A|55898|unc-45 homolog A (C. elegans)	NM_001039675|UNC45A|55898|unc-45 homolog A (C. elegans)
hg18_v1_chrX_-_119578747_119578844	0.0234645	ACAGUAU	BX537787|CUL4B|8450|cullin 4B	BX647096|CUL4B|8450|cullin 4B	CR936722|CUL4B|8450|cullin 4B	NM_001079872|CUL4B|8450|cullin 4B
hg18_v1_chr2_+_45732416_45732741	0.0234196	ACAGUAU	AL832345|PRKCE|5581|protein kinase C, epsilon	NM_005400|PRKCE|5581|protein kinase C, epsilon	BC109033|PRKCE|5581|protein kinase C, epsilon	BC109034|PRKCE|5581|protein kinase C, epsilon	AK313842|PRKCE|5581|protein kinase C, epsilon	X65293|PRKCE|5581|protein kinase C, epsilon
hg18_v1_chr6_-_13819622_13819807	0.0233888	ACAGUAU	AB055311|RANBP9|10048|RAN binding protein 9	NM_005493|RANBP9|10048|RAN binding protein 9
hg18_v1_chr9_+_132002692_132002692	0.0233842	ACAGUAU	NM_001128826|NCS1|23413|neuronal calcium sensor 1
hg18_v1_chr17_+_24742068_24742074	0.0233526	ACAGUAU	NM_020791|TAOK1|57551|TAO kinase 1	BC133039|TAOK1|57551|TAO kinase 1	BC144067|TAOK1|57551|TAO kinase 1
hg18_v1_chr17_-_38229790_38229860	0.0232258	ACAGUAU	AK223411|BECN1|8678|beclin 1, autophagy related	AK312651|BECN1|8678|beclin 1, autophagy related	BC010276|BECN1|8678|beclin 1, autophagy related	AF139131|BECN1|8678|beclin 1, autophagy related	BX647788|BECN1|8678|beclin 1, autophagy related	AK298619|BECN1|8678|beclin 1, autophagy related	AK299616|BECN1|8678|beclin 1, autophagy related	NM_003766|BECN1|8678|beclin 1, autophagy related
hg18_v1_chr16_-_52295214_52295303	0.0229845	ACAGUAU	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg18_v1_chr16_-_11917305_11917373	0.0229153	ACAGUAU	X17644|GSPT1|2935|G1 to S phase transition 1	NM_001130006|GSPT1|2935|G1 to S phase transition 1	NM_002094|GSPT1|2935|G1 to S phase transition 1
hg18_v1_chr2_-_39201066_39201107	0.0228419	ACAGUAU	L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)	NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg18_v1_chr11_-_10787157_10787248	0.0221567	ACAGUAU	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr3_-_131081910_131082091	0.0219988	ACAGUAU	AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1	BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1	NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1
hg18_v1_chr5_+_134012133_134012527	0.0219394	ACAGUAU	AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)	NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)	BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)
hg18_v1_chr16_-_11918019_11918019	0.0209275	ACAGUAU	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg18_v1_chr4_+_72271218_72271956	0.0209179	ACAGUAU	AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr21_-_26465005_26465009	0.0207875	ACAGUAU	NM_000484|APP|351|amyloid beta (A4) precursor protein	NM_001136129|APP|351|amyloid beta (A4) precursor protein	NM_001136130|APP|351|amyloid beta (A4) precursor protein	NM_201413|APP|351|amyloid beta (A4) precursor protein	NM_201414|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chrX_-_31194867_31195043	0.0204394	ACAGUAU	M92650|DMD|1756|dystrophin	BC070078|DMD|1756|dystrophin	NM_004015|DMD|1756|dystrophin	NM_004016|DMD|1756|dystrophin	NM_004017|DMD|1756|dystrophin	NM_004018|DMD|1756|dystrophin	NM_004019|DMD|1756|dystrophin	S42206|DMD|1756|dystrophin	BC094758|DMD|1756|dystrophin	AK299936|DMD|1756|dystrophin	BC028720|DMD|1756|dystrophin	S38776|DMD|1756|dystrophin
hg18_v1_chr19_+_37528340_37528464	0.0202988	ACAGUAU	NM_001136156|ZNF507|22847|zinc finger protein 507	NM_014910|ZNF507|22847|zinc finger protein 507	AK292526|ZNF507|22847|zinc finger protein 507	AB029007|ZNF507|22847|zinc finger protein 507	BX640881|ZNF507|22847|zinc finger protein 507	BC136417|ZNF507|22847|zinc finger protein 507	AL713775|ZNF507|22847|zinc finger protein 507
hg18_v1_chr16_+_65018316_65018408	0.0199774	ACAGUAU	NM_001136106|BEAN1|146227|brain expressed, associated with NEDD4, 1	NM_001178020|BEAN1|146227|brain expressed, associated with NEDD4, 1	NM_001197224|BEAN1|146227|brain expressed, associated with NEDD4, 1	NM_001197225|BEAN1|146227|brain expressed, associated with NEDD4, 1
hg18_v1_chr13_-_32658215_32658215	0.0198945	ACAGUAU	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr20_-_61039710_61039750	0.0198027	ACAGUAU	NM_022105|DIDO1|11083|death inducer-obliterator 1	NM_033081|DIDO1|11083|death inducer-obliterator 1	NM_080797|DIDO1|11083|death inducer-obliterator 1
hg18_v1_chr6_+_122762384_122762405	0.0196709	ACAGUAU	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg18_v1_chr19_+_13090101_13090150	0.0196286	ACAGUAU	NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
hg18_v1_chr20_+_62266270_62266284	0.019575	ACAGUAU	AB020642|MYT1|4661|myelin transcription factor 1	NM_004535|MYT1|4661|myelin transcription factor 1
hg18_v1_chr9_-_97310651_97310759	0.0193797	ACAGUAU	NM_000264|PTCH1|5727|patched 1
hg18_v1_chr1_+_160733587_160733587	0.0189722	ACAGUAU	AK058195|UHMK1|127933|U2AF homology motif (UHM) kinase 1	NM_001184763|UHMK1|127933|U2AF homology motif (UHM) kinase 1
hg18_v1_chr12_-_67012303_67012444	0.0187721	ACAGUAU	BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)
hg18_v1_chr8_+_17440664_17440771	0.0184363	ACAGUAU	NM_001164771|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	NM_003046|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC069648|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC104905|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC113661|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC143583|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg18_v1_chrX_-_33139349_33139593	0.01833	ACAGUAU	M63073|DMD|1756|dystrophin	M63074|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg18_v1_chr7_+_21434097_21434591	0.0181736	ACAGUAU	AK289728|SP4|6671|Sp4 transcription factor	AK296749|SP4|6671|Sp4 transcription factor	NM_003112|SP4|6671|Sp4 transcription factor	X68561|SP4|6671|Sp4 transcription factor	BC109300|SP4|6671|Sp4 transcription factor	BC109301|SP4|6671|Sp4 transcription factor
hg18_v1_chr3_-_117647053_117647074	0.0180241	ACAGUAU	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr3_-_88281705_88281724	0.0179994	ACAGUAU	NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1	BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1
hg18_v1_chr1_+_110554836_110554899	0.0179708	ACAGUAU	NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4	NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4
hg18_v1_chr13_+_19430788_19430847	0.0176588	ACAGUAU	BC036372|ZMYM2|7750|zinc finger, MYM-type 2	NM_003453|ZMYM2|7750|zinc finger, MYM-type 2	NM_197968|ZMYM2|7750|zinc finger, MYM-type 2	AL136621|ZMYM2|7750|zinc finger, MYM-type 2	NM_001190964|ZMYM2|7750|zinc finger, MYM-type 2	Y13472|ZMYM2|7750|zinc finger, MYM-type 2
hg18_v1_chr10_-_98336783_98336844	0.0174328	ACAGUAU	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3	BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3	BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3	BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3	NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr3_-_150858274_150858577	0.0170653	ACAGUAU	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	CR608322|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg18_v1_chr18_+_30589937_30589938	0.0169262	ACAGUAU	NM_001390|DTNA|1837|dystrobrevin, alpha	NM_001391|DTNA|1837|dystrobrevin, alpha	BT006937|DTNA|1837|dystrobrevin, alpha	EU831587|DTNA|1837|dystrobrevin, alpha	EU831619|DTNA|1837|dystrobrevin, alpha	EU831672|DTNA|1837|dystrobrevin, alpha	EU831705|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr7_+_882704_882755	0.0168012	ACAGUAU	NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)
hg18_v1_chr1_+_202752084_202752167	0.0164878	ACAGUAU	BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)
hg18_v1_chr2_-_127817143_127817274	0.0160431	ACAGUAU	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2
hg18_v1_chr21_-_45062456_45062499	0.0159592	ACAGUAU	CR609005|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	CR617517|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	CR612989|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	CR606191|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	CR610020|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	BC008420|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	NM_006936|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)
hg18_v1_chr8_-_31010772_31010772	0.015345	ACAGUAU	AF195513|PURG|29942|purine-rich element binding protein G	AY077841|PURG|29942|purine-rich element binding protein G	NM_001015508|PURG|29942|purine-rich element binding protein G
hg18_v1_chr1_-_11245193_11245196	0.0149755	ACAGUAU	NM_004958|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)
hg18_v1_chr20_+_39090875_39090942	0.0147767	ACAGUAU	NM_003286|TOP1|7150|topoisomerase (DNA) I	AK225095|TOP1|7150|topoisomerase (DNA) I	AK292943|TOP1|7150|topoisomerase (DNA) I	BC039009|TOP1|7150|topoisomerase (DNA) I	BC004475|TOP1|7150|topoisomerase (DNA) I	AK310508|TOP1|7150|topoisomerase (DNA) I	BC067349|TOP1|7150|topoisomerase (DNA) I	J03250|TOP1|7150|topoisomerase (DNA) I
hg18_v1_chr1_-_47552238_47552507	0.0143131	ACAGUAU	AK307519|STIL|6491|SCL/TAL1 interrupting locus	BC053615|STIL|6491|SCL/TAL1 interrupting locus	CR749851|STIL|6491|SCL/TAL1 interrupting locus	M74558|STIL|6491|SCL/TAL1 interrupting locus	NM_001048166|STIL|6491|SCL/TAL1 interrupting locus	NM_003035|STIL|6491|SCL/TAL1 interrupting locus
hg18_v1_chr9_-_72219359_72219392	0.0139285	ACAGUAU	D31716|KLF9|687|Kruppel-like factor 9	S72504|KLF9|687|Kruppel-like factor 9	NM_001206|KLF9|687|Kruppel-like factor 9
hg18_v1_chr14_+_22859236_22859236	0.0139111	ACAGUAU	NM_004643|PABPN1|8106|poly(A) binding protein, nuclear 1
hg18_v1_chr14_-_30565275_30565368	0.0138923	ACAGUAU	BC126221|STRN3|29966|striatin, calmodulin binding protein 3	BC132673|STRN3|29966|striatin, calmodulin binding protein 3	BC143933|STRN3|29966|striatin, calmodulin binding protein 3	AK314041|STRN3|29966|striatin, calmodulin binding protein 3	AK290229|STRN3|29966|striatin, calmodulin binding protein 3	U17989|STRN3|29966|striatin, calmodulin binding protein 3	NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3	NM_014574|STRN3|29966|striatin, calmodulin binding protein 3
hg18_v1_chr7_-_2850175_2850493	0.0137704	ACAGUAU	AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12	AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12	L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12	NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12	BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12	BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12
hg18_v1_chr1_+_169721260_169721377	0.0136606	ACAGUAU	BC066968|PRRC2C|23215|proline-rich coiled-coil 2C	NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C	BC058930|PRRC2C|23215|proline-rich coiled-coil 2C	BC026108|PRRC2C|23215|proline-rich coiled-coil 2C	BC045713|PRRC2C|23215|proline-rich coiled-coil 2C	BC001260|PRRC2C|23215|proline-rich coiled-coil 2C	BC006090|PRRC2C|23215|proline-rich coiled-coil 2C
hg18_v1_chr12_-_49763566_49763715	0.0136017	ACAGUAU	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr9_+_132444763_132444804	0.0135776	ACAGUAU	AK295155|FUBP3|8939|far upstream element (FUSE) binding protein 3	NM_003934|FUBP3|8939|far upstream element (FUSE) binding protein 3	BC137338|FUBP3|8939|far upstream element (FUSE) binding protein 3	BC137340|FUBP3|8939|far upstream element (FUSE) binding protein 3	CR613887|FUBP3|8939|far upstream element (FUSE) binding protein 3
hg18_v1_chr3_+_114948550_114948581	0.0135683	ACAGUAU	NM_001690|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A	AK293804|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg18_v1_chr18_+_30651923_30651923	0.0134322	ACAGUAU	AK296450|DTNA|1837|dystrobrevin, alpha	NM_001198943|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr2_-_177838104_177838104	0.0128245	ACAGUAU	AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2
hg18_v1_chr6_-_134537699_134537726	0.0126149	ACAGUAU	NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr10_+_93673544_93673801	0.0123021	ACAGUAU	AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)	NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)	BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)	AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)
hg18_v1_chr22_+_45401321_45401359	0.0114436	ACAGUAU	CR456470|GRAMD4|23151|GRAM domain containing 4	NM_015124|GRAMD4|23151|GRAM domain containing 4	BC129837|GRAMD4|23151|GRAM domain containing 4
hg18_v1_chr12_-_55790355_55790355	0.0110592	ACAGUAU	AK291044|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced	NM_001178079|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced
hg18_v1_chr6_-_53034547_53034642	0.0108272	ACAGUAU	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase	NM_016513|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr1_-_39180036_39180057	0.0107107	ACAGUAU	NM_017821|RHBDL2|54933|rhomboid, veinlet-like 2 (Drosophila)	BC013103|RHBDL2|54933|rhomboid, veinlet-like 2 (Drosophila)
hg18_v1_chr5_-_79322549_79322879	0.0106118	ACAGUAU	AK091375|MTX3|345778|metaxin 3	BX538064|MTX3|345778|metaxin 3	BC150295|MTX3|345778|metaxin 3	AK296864|MTX3|345778|metaxin 3	BX647596|MTX3|345778|metaxin 3	NM_001010891|MTX3|345778|metaxin 3	NM_001167741|MTX3|345778|metaxin 3
hg18_v1_chr14_-_94677807_94677807	0.0105258	ACAGUAU	AB028449|DICER1|23405|dicer 1, ribonuclease type III	NM_030621|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr5_-_167938991_167939195	0.0105123	ACAGUAU	BC013705|PANK3|79646|pantothenate kinase 3	NM_024594|PANK3|79646|pantothenate kinase 3
hg18_v1_chr20_+_43028533_43028587	0.00997441	ACAGUAU	NM_006282|STK4|6789|serine/threonine kinase 4	AB209315|STK4|6789|serine/threonine kinase 4	BC029511|STK4|6789|serine/threonine kinase 4	AK309169|STK4|6789|serine/threonine kinase 4	AK225326|STK4|6789|serine/threonine kinase 4	BC005231|STK4|6789|serine/threonine kinase 4	BC015332|STK4|6789|serine/threonine kinase 4	BC038850|STK4|6789|serine/threonine kinase 4	CR933633|STK4|6789|serine/threonine kinase 4	BC093768|STK4|6789|serine/threonine kinase 4
hg18_v1_chr16_-_87378872_87378967	0.00990898	ACAGUAU	NM_001142864|FAM38A|9780|family with sequence similarity 38, member A	AB384448|FAM38A|9780|family with sequence similarity 38, member A
hg18_v1_chr7_+_18501876_18501973	0.00987492	ACAGUAU	BC150328|HDAC9|9734|histone deacetylase 9	AB018287|HDAC9|9734|histone deacetylase 9	AJ459808|HDAC9|9734|histone deacetylase 9	BC152405|HDAC9|9734|histone deacetylase 9	NM_014707|HDAC9|9734|histone deacetylase 9	NM_178423|HDAC9|9734|histone deacetylase 9	AK297404|HDAC9|9734|histone deacetylase 9	AK316109|HDAC9|9734|histone deacetylase 9	AY429540|HDAC9|9734|histone deacetylase 9
hg18_v1_chr4_-_81213333_81213649	0.0097634	ACAGUAU	NM_001145794|ANTXR2|118429|anthrax toxin receptor 2	NM_058172|ANTXR2|118429|anthrax toxin receptor 2	BC107876|ANTXR2|118429|anthrax toxin receptor 2
hg18_v1_chr20_+_31613800_31613877	0.00968083	ACAGUAU	BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr1_+_198975227_198975361	0.0094003	ACAGUAU	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr7_-_56086609_56086797	0.00928392	ACAGUAU	BC063614|PSPH|5723|phosphoserine phosphatase	BX537439|PSPH|5723|phosphoserine phosphatase	AK054677|PSPH|5723|phosphoserine phosphatase	NM_004577|PSPH|5723|phosphoserine phosphatase	BC052958|PSPH|5723|phosphoserine phosphatase
hg18_v1_chr3_+_134775094_134775239	0.00925354	ACAGUAU	NM_001134422|CDV3|55573|CDV3 homolog (mouse)	NM_017548|CDV3|55573|CDV3 homolog (mouse)
hg18_v1_chr2_+_198088559_198088564	0.00879116	ACAGUAU	AK289377|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF250319|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	NM_199482|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr2_+_196229715_196229926	0.00852085	ACAGUAU	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg18_v1_chr12_-_109505409_109505498	0.00843232	ACAGUAU	BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)
hg18_v1_chr1_+_36394338_36394460	0.00829468	ACAGUAU	BC057293|MAP7D1|55700|MAP7 domain containing 1	AF064852|MAP7D1|55700|MAP7 domain containing 1	AK096341|MAP7D1|55700|MAP7 domain containing 1	BC106053|MAP7D1|55700|MAP7 domain containing 1	NM_018067|MAP7D1|55700|MAP7 domain containing 1
hg18_v1_chr2_-_70329067_70329379	0.00828772	ACAGUAU	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg18_v1_chr18_+_30652223_30652409	0.00817426	ACAGUAU	FJ535564|DTNA|1837|dystrobrevin, alpha	FJ535565|DTNA|1837|dystrobrevin, alpha	NM_001198942|DTNA|1837|dystrobrevin, alpha	NM_001198944|DTNA|1837|dystrobrevin, alpha	NM_032980|DTNA|1837|dystrobrevin, alpha	NM_032981|DTNA|1837|dystrobrevin, alpha	AK295732|DTNA|1837|dystrobrevin, alpha	U46746|DTNA|1837|dystrobrevin, alpha	AK295789|DTNA|1837|dystrobrevin, alpha	U26743|DTNA|1837|dystrobrevin, alpha	CR621250|DTNA|1837|dystrobrevin, alpha	AK315215|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr9_-_73715927_73716026	0.00811198	ACAGUAU	BC044576|FAM108B1|51104|family with sequence similarity 108, member B1	NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1	NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1	AK293060|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr1_+_62835759_62835825	0.00804816	ACAGUAU	CR600651|ANGPTL3|27329|angiopoietin-like 3	NM_014495|ANGPTL3|27329|angiopoietin-like 3	AK315304|ANGPTL3|27329|angiopoietin-like 3	AK289426|ANGPTL3|27329|angiopoietin-like 3	BC007059|ANGPTL3|27329|angiopoietin-like 3	BC058287|ANGPTL3|27329|angiopoietin-like 3	AY358273|ANGPTL3|27329|angiopoietin-like 3	AF152562|ANGPTL3|27329|angiopoietin-like 3
hg18_v1_chr12_+_104025578_104025656	0.0079812	ACAGUAU	AK001657|KIAA1033|23325|KIAA1033	NM_015275|KIAA1033|23325|KIAA1033	AB028956|KIAA1033|23325|KIAA1033	AK001728|KIAA1033|23325|KIAA1033
hg18_v1_chr7_-_105540210_105540292	0.00792883	ACAGUAU	EU831812|SYPL1|6856|synaptophysin-like 1	EU831889|SYPL1|6856|synaptophysin-like 1	BC061887|SYPL1|6856|synaptophysin-like 1	S72481|SYPL1|6856|synaptophysin-like 1	X68194|SYPL1|6856|synaptophysin-like 1	AK292230|SYPL1|6856|synaptophysin-like 1	NM_006754|SYPL1|6856|synaptophysin-like 1
hg18_v1_chr4_+_7039789_7039919	0.00785807	ACAGUAU	NM_001113363|TBC1D14|57533|TBC1 domain family, member 14
hg18_v1_chr6_-_139737477_139737477	0.00779986	ACAGUAU	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg18_v1_chr20_-_61028319_61028347	0.00767485	ACAGUAU	NM_001193369|DIDO1|11083|death inducer-obliterator 1	NM_001193370|DIDO1|11083|death inducer-obliterator 1	NM_080796|DIDO1|11083|death inducer-obliterator 1
hg18_v1_chr8_+_41467220_41467237	0.00743982	ACAGUAU	CR616191|GOLGA7|51125|golgin A7	NM_001174124|GOLGA7|51125|golgin A7	NM_016099|GOLGA7|51125|golgin A7
hg18_v1_chr21_+_33837215_33837229	0.00738847	ACAGUAU	AY026895|SON|6651|SON DNA binding protein	NM_032195|SON|6651|SON DNA binding protein	NM_138927|SON|6651|SON DNA binding protein	AK127947|SON|6651|SON DNA binding protein
hg18_v1_chr6_-_11340887_11340906	0.00715482	ACAGUAU	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr8_+_41467283_41467329	0.00687138	ACAGUAU	AF068291|GOLGA7|51125|golgin A7	BC012032|GOLGA7|51125|golgin A7	NM_001002296|GOLGA7|51125|golgin A7
hg18_v1_chr22_+_34267297_34267382	0.00680287	ACAGUAU	BC013419|RASD2|23551|RASD family, member 2	NM_014310|RASD2|23551|RASD family, member 2	CR456477|RASD2|23551|RASD family, member 2
hg18_v1_chr3_-_44494160_44494167	0.00677236	ACAGUAU	AY295873|ZNF445|353274|zinc finger protein 445	NM_181489|ZNF445|353274|zinc finger protein 445
hg18_v1_chr18_+_66107116_66107178	0.00676984	ACAGUAU	NM_004232|SOCS6|9306|suppressor of cytokine signaling 6
hg18_v1_chr4_+_109033868_109033878	0.00659398	ACAGUAU	NM_001136257|SGMS2|166929|sphingomyelin synthase 2	NM_152621|SGMS2|166929|sphingomyelin synthase 2	BC028705|SGMS2|166929|sphingomyelin synthase 2	AK314049|SGMS2|166929|sphingomyelin synthase 2	BC041369|SGMS2|166929|sphingomyelin synthase 2
hg18_v1_chr5_-_83052606_83052775	0.0065564	ACAGUAU	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr11_+_9642200_9642224	0.00645617	ACAGUAU	NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit
hg18_v1_chr1_-_21478571_21478769	0.00612385	ACAGUAU	D43698|ECE1|1889|endothelin converting enzyme 1	BX648351|ECE1|1889|endothelin converting enzyme 1	NM_001113347|ECE1|1889|endothelin converting enzyme 1
hg18_v1_chr2_+_177965617_177965733	0.00600933	ACAGUAU	AK309714|AGPS|8540|alkylglycerone phosphate synthase	NM_003659|AGPS|8540|alkylglycerone phosphate synthase	CR591757|AGPS|8540|alkylglycerone phosphate synthase
hg18_v1_chr12_+_61146798_61146895	0.00597384	ACAGUAU	NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)	BX537415|MON2|23041|MON2 homolog (S. cerevisiae)	AL833066|MON2|23041|MON2 homolog (S. cerevisiae)	AK123842|MON2|23041|MON2 homolog (S. cerevisiae)	BC065289|MON2|23041|MON2 homolog (S. cerevisiae)	BC136621|MON2|23041|MON2 homolog (S. cerevisiae)	BC144309|MON2|23041|MON2 homolog (S. cerevisiae)	BC144324|MON2|23041|MON2 homolog (S. cerevisiae)	AB028963|MON2|23041|MON2 homolog (S. cerevisiae)	BC141817|MON2|23041|MON2 homolog (S. cerevisiae)	BC142710|MON2|23041|MON2 homolog (S. cerevisiae)	BC151241|MON2|23041|MON2 homolog (S. cerevisiae)
hg18_v1_chr7_-_47545717_47545752	0.00595203	ACAGUAU	BC071791|TNS3|64759|tensin 3	NM_022748|TNS3|64759|tensin 3
hg18_v1_chr17_+_23393744_23393816	0.0059184	ACAGUAU	AK315315|NLK|51701|nemo-like kinase	AF197898|NLK|51701|nemo-like kinase	NM_016231|NLK|51701|nemo-like kinase	AF180819|NLK|51701|nemo-like kinase
hg18_v1_chr11_-_127897271_127897417	0.00591687	ACAGUAU	BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)
hg18_v1_chr3_+_153468518_153468518	0.00529467	ACAGUAU	NM_021038|MBNL1|4154|muscleblind-like (Drosophila)	NM_207292|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chrX_+_154650590_154650667	0.00526927	ACAGUAU	AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)	NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)	AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)
hg18_v1_chr14_+_56927014_56927058	0.00511259	ACAGUAU	AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chrX_-_54401161_54401173	0.00492854	ACAGUAU	AY352048|WNK3|65267|WNK lysine deficient protein kinase 3	NM_001002838|WNK3|65267|WNK lysine deficient protein kinase 3	NM_020922|WNK3|65267|WNK lysine deficient protein kinase 3
hg18_v1_chr12_-_120220493_120220493	0.00469667	ACAGUAU	AF287630|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF287631|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_006549|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_153499|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_153500|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_172214|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_172215|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_172216|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr1_+_37712661_37712708	0.00464577	ACAGUAU	NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A
hg18_v1_chr9_-_122516399_122516678	0.00464001	ACAGUAU	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg18_v1_chr3_-_56784634_56784784	0.00437124	ACAGUAU	AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3	NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr11_-_118286822_118286822	0.00431038	ACAGUAU	AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like	NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like
hg18_v1_chr12_+_75681973_75682014	0.00425885	ACAGUAU	NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17	BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17
hg18_v1_chr2_+_138975819_138975908	0.00422217	ACAGUAU	NM_001001664|SPOPL|339745|speckle-type POZ protein-like	BC071613|SPOPL|339745|speckle-type POZ protein-like
hg18_v1_chr10_-_43212166_43212284	0.00420655	ACAGUAU	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chr18_+_30427279_30427326	0.0038918	ACAGUAU	NM_001128175|DTNA|1837|dystrobrevin, alpha	NM_001198938|DTNA|1837|dystrobrevin, alpha	NM_001198939|DTNA|1837|dystrobrevin, alpha	NM_001198940|DTNA|1837|dystrobrevin, alpha	AK308410|DTNA|1837|dystrobrevin, alpha	AL833285|DTNA|1837|dystrobrevin, alpha	BC005300|DTNA|1837|dystrobrevin, alpha	AB209102|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr8_-_67687980_67688077	0.00386848	ACAGUAU	BC032233|LOC645895|645895|hypothetical LOC645895	NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1	NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1
hg18_v1_chr7_+_77307382_77307508	0.00381942	ACAGUAU	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr3_-_15773061_15773101	0.00381262	ACAGUAU	AY367056|ANKRD28|23243|ankyrin repeat domain 28	NM_001195099|ANKRD28|23243|ankyrin repeat domain 28	BC035170|ANKRD28|23243|ankyrin repeat domain 28	BC048975|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr15_-_75150574_75150624	0.00368286	ACAGUAU	NM_001168412|TSPAN3|10099|tetraspanin 3	NM_005724|TSPAN3|10099|tetraspanin 3	NM_198902|TSPAN3|10099|tetraspanin 3
hg18_v1_chr20_-_47965474_47965486	0.00363471	ACAGUAU	AK295536|SPATA2|9825|spermatogenesis associated 2	NM_006038|SPATA2|9825|spermatogenesis associated 2
hg18_v1_chr4_-_74343320_74343379	0.00327557	ACAGUAU	BC043394|ANKRD17|26057|ankyrin repeat domain 17	BC004173|ANKRD17|26057|ankyrin repeat domain 17	AF308285|ANKRD17|26057|ankyrin repeat domain 17	NM_032217|ANKRD17|26057|ankyrin repeat domain 17	NM_198889|ANKRD17|26057|ankyrin repeat domain 17	AK307581|ANKRD17|26057|ankyrin repeat domain 17
hg18_v1_chr1_-_167721723_167721875	0.00295745	ACAGUAU	AF160812|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2	AF135488|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2	BC018514|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2	AK313779|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2	NM_006996|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2	AF153330|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2
hg18_v1_chr14_-_50632171_50632171	0.00290324	ACAGUAU	NM_015163|TRIM9|114088|tripartite motif containing 9	NM_052978|TRIM9|114088|tripartite motif containing 9
hg18_v1_chr3_+_67131416_67131420	0.00224366	ACAGUAU	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8	AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8	AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8
hg18_v1_chr5_-_127901633_127901848	0.00210141	ACAGUAU	NM_001999|FBN2|2201|fibrillin 2	AF193046|FBN2|2201|fibrillin 2	CR612828|FBN2|2201|fibrillin 2
hg18_v1_chr4_-_103968104_103968444	0.00209693	ACAGUAU	BC037894|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_003340|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181886|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181888|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC003395|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK315775|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181889|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
hg18_v1_chr4_-_138673078_138673107	0.00192993	ACAGUAU	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg18_v1_chr16_+_52025845_52025862	0.00183473	ACAGUAU	NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr3_-_49424529_49424532	0.00182634	ACAGUAU	AK130066|RHOA|387|ras homolog gene family, member A	NM_001664|RHOA|387|ras homolog gene family, member A
hg18_v1_chr3_-_143427131_143427158	0.00156023	ACAGUAU	NM_001039547|GK5|256356|glycerol kinase 5 (putative)
hg18_v1_chr20_-_48165886_48165904	0.00143376	ACAGUAU	AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1
hg18_v1_chr7_+_64975596_64975772	0.00138529	ACAGUAU	CR602129|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	BC027734|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	NM_173517|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	BX647631|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	AY423045|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1
hg18_v1_chr4_+_72423633_72423829	0.00135209	ACAGUAU	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr2_-_135193011_135193041	0.0012452	ACAGUAU	BC026170|TMEM163|81615|transmembrane protein 163	NM_030923|TMEM163|81615|transmembrane protein 163
hg18_v1_chr20_+_60130866_60130952	0.00123968	ACAGUAU	BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	CR618201|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)
hg18_v1_chr12_+_4300607_4300697	0.00113661	ACAGUAU	NM_020375|C12orf5|57103|chromosome 12 open reading frame 5	AJ272206|C12orf5|57103|chromosome 12 open reading frame 5	CR613889|C12orf5|57103|chromosome 12 open reading frame 5	AK313226|C12orf5|57103|chromosome 12 open reading frame 5	AY425618|C12orf5|57103|chromosome 12 open reading frame 5	BC012340|C12orf5|57103|chromosome 12 open reading frame 5	AM392615|C12orf5|57103|chromosome 12 open reading frame 5
hg18_v1_chr16_-_57221240_57221252	0.000703165	ACAGUAU	BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1
hg18_v1_chr3_+_63825221_63825275	0.00068113	ACAGUAU	AF032104|ATXN7|6314|ataxin 7	AF032105|ATXN7|6314|ataxin 7	NM_000333|ATXN7|6314|ataxin 7	AJ000517|ATXN7|6314|ataxin 7
hg18_v1_chr5_-_32348826_32348954	0.000335165	ACAGUAU	AK000483|MTMR12|54545|myotubularin related protein 12	NM_001040446|MTMR12|54545|myotubularin related protein 12
hg18_v1_chr19_-_3651466_3651483	0.000300046	ACAGUAU	NM_001195733|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma	NM_012398|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma
hg18_v1_chr3_+_63859114_63859114	5.8856e-06	ACAGUAU	NM_001177387|ATXN7|6314|ataxin 7
