hg18_v1_chr11_+_26310253_26310359	0.158527	ACUGCAU	NM_031418|ANO3|63982|anoctamin 3	AK302659|ANO3|63982|anoctamin 3
hg18_v1_chr18_+_29412538_29412576	0.126417	ACUGCAU	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg18_v1_chr2_-_100088224_100088476	0.115786	ACUGCAU	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr3_+_148609841_148609881	0.10521	ACUGCAU	NM_003412|ZIC1|7545|Zic family member 1 (odd-paired homolog, Drosophila)
hg18_v1_chr10_+_68355797_68355845	0.0946283	ACUGCAU	NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3
hg18_v1_chr6_+_11646472_11646496	0.0939222	ACUGCAU	NM_001100829|TMEM170B|100113407|transmembrane protein 170B
hg18_v1_chr3_-_71886613_71886613	0.0876667	ACUGCAU	AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3	NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3
hg18_v1_chr11_+_108798047_108798060	0.0829602	ACUGCAU	AK303693|C11orf87|399947|chromosome 11 open reading frame 87	NM_207645|C11orf87|399947|chromosome 11 open reading frame 87
hg18_v1_chr10_+_97505398_97505662	0.0754376	ACUGCAU	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr10_-_7491204_7491308	0.073234	ACUGCAU	AB046837|SFMBT2|57713|Scm-like with four mbt domains 2	BC152430|SFMBT2|57713|Scm-like with four mbt domains 2	NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2
hg18_v1_chr15_+_39496583_39496722	0.0691139	ACUGCAU	NM_015138|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK292302|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	D87440|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC015052|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg18_v1_chr4_-_177160566_177160641	0.0685576	ACUGCAU	NM_005277|GPM6A|2823|glycoprotein M6A	NM_201592|GPM6A|2823|glycoprotein M6A
hg18_v1_chr12_-_25295091_25295326	0.0640059	ACUGCAU	AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
hg18_v1_chr18_+_53253775_53253952	0.0626835	ACUGCAU	NM_004852|ONECUT2|9480|one cut homeobox 2	Y18198|ONECUT2|9480|one cut homeobox 2	BC108925|ONECUT2|9480|one cut homeobox 2	BC108926|ONECUT2|9480|one cut homeobox 2
hg18_v1_chr18_+_13601664_13601664	0.0602162	ACUGCAU	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr7_-_28964553_28964561	0.0601375	ACUGCAU	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats
hg18_v1_chr17_+_70244945_70245004	0.0596614	ACUGCAU	AK098068|RAB37|326624|RAB37, member RAS oncogene family	NM_001006638|RAB37|326624|RAB37, member RAS oncogene family	NM_001163990|RAB37|326624|RAB37, member RAS oncogene family	AK296172|RAB37|326624|RAB37, member RAS oncogene family	BC016615|RAB37|326624|RAB37, member RAS oncogene family
hg18_v1_chr13_+_75092570_75092570	0.0587592	ACUGCAU	AF330045|LMO7|4008|LIM domain 7	NM_005358|LMO7|4008|LIM domain 7
hg18_v1_chr7_+_119700924_119700957	0.0583373	ACUGCAU	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2
hg18_v1_chr12_-_107649418_107649425	0.0573197	ACUGCAU	AK023205|CORO1C|23603|coronin, actin binding protein, 1C	AK223073|CORO1C|23603|coronin, actin binding protein, 1C	AK304839|CORO1C|23603|coronin, actin binding protein, 1C	AK311315|CORO1C|23603|coronin, actin binding protein, 1C	AK316065|CORO1C|23603|coronin, actin binding protein, 1C	AB030656|CORO1C|23603|coronin, actin binding protein, 1C	NM_014325|CORO1C|23603|coronin, actin binding protein, 1C
hg18_v1_chr2_+_165860528_165860528	0.0572262	ACUGCAU	NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr3_+_129124591_129124593	0.0568604	ACUGCAU	NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12
hg18_v1_chr11_+_91724909_91724909	0.0567292	ACUGCAU	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg18_v1_chr10_+_97461525_97461525	0.054203	ACUGCAU	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr18_+_65219114_65219306	0.053732	ACUGCAU	NM_152721|DOK6|220164|docking protein 6	AY599248|DOK6|220164|docking protein 6	BC096744|DOK6|220164|docking protein 6
hg18_v1_chr12_+_68419446_68419454	0.0531141	ACUGCAU	CR607211|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_175623|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_175625|RAB3IP|117177|RAB3A interacting protein (rabin3)	AJ312897|RAB3IP|117177|RAB3A interacting protein (rabin3)	AJ312899|RAB3IP|117177|RAB3A interacting protein (rabin3)	AJ312901|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr11_-_16380967_16380988	0.0527797	ACUGCAU	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr14_+_28305922_28306037	0.0525438	ACUGCAU	X74142|FOXG1|2290|forkhead box G1	X74143|FOXG1|2290|forkhead box G1	NM_005249|FOXG1|2290|forkhead box G1
hg18_v1_chr16_-_8964751_8964841	0.0525237	ACUGCAU	NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)	Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)
hg18_v1_chr17_-_33179118_33179210	0.0516827	ACUGCAU	HM116553|HNF1B|6928|HNF1 homeobox B	HM116554|HNF1B|6928|HNF1 homeobox B	HM116555|HNF1B|6928|HNF1 homeobox B	HM116556|HNF1B|6928|HNF1 homeobox B	AK290131|HNF1B|6928|HNF1 homeobox B	AK296633|HNF1B|6928|HNF1 homeobox B	AK298393|HNF1B|6928|HNF1 homeobox B	BC017714|HNF1B|6928|HNF1 homeobox B	X58840|HNF1B|6928|HNF1 homeobox B	NM_000458|HNF1B|6928|HNF1 homeobox B	NM_001165923|HNF1B|6928|HNF1 homeobox B
hg18_v1_chr9_-_23811477_23811477	0.0512094	ACUGCAU	BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr1_+_203804734_203804767	0.0508016	ACUGCAU	AK293816|MFSD4|148808|major facilitator superfamily domain containing 4	NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4
hg18_v1_chr4_+_78089879_78089930	0.0506038	ACUGCAU	CR612694|SEPT11|55752|septin 11	BC008083|SEPT11|55752|septin 11	NM_018243|SEPT11|55752|septin 11
hg18_v1_chr10_+_25504295_25504295	0.0504803	ACUGCAU	AY528411|GPR158|57512|G protein-coupled receptor 158	NM_020752|GPR158|57512|G protein-coupled receptor 158
hg18_v1_chr1_-_153109349_153109391	0.0480828	ACUGCAU	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr3_-_171786468_171786556	0.047927	ACUGCAU	AK122655|SLC7A14|57709|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	CR599969|SLC7A14|57709|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14	NM_020949|SLC7A14|57709|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
hg18_v1_chr10_-_7493418_7493462	0.0474261	ACUGCAU	BC144327|SFMBT2|57713|Scm-like with four mbt domains 2	AK090887|SFMBT2|57713|Scm-like with four mbt domains 2	NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2
hg18_v1_chr3_-_186699239_186699547	0.0460966	ACUGCAU	EU831805|TMEM41A|90407|transmembrane protein 41A	EU831882|TMEM41A|90407|transmembrane protein 41A	CR620821|TMEM41A|90407|transmembrane protein 41A	AK313954|TMEM41A|90407|transmembrane protein 41A	BC019884|TMEM41A|90407|transmembrane protein 41A	BC008043|TMEM41A|90407|transmembrane protein 41A	BX647928|TMEM41A|90407|transmembrane protein 41A	AY358547|TMEM41A|90407|transmembrane protein 41A	AK172748|TMEM41A|90407|transmembrane protein 41A	AK290878|TMEM41A|90407|transmembrane protein 41A	NM_080652|TMEM41A|90407|transmembrane protein 41A
hg18_v1_chr9_-_23811842_23811847	0.0456216	ACUGCAU	BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr9_-_21021566_21021655	0.0454633	ACUGCAU	CR594128|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2	BC114215|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2	BX648779|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2	NM_001010915|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2	CR608542|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2
hg18_v1_chr14_-_23090606_23090714	0.0446223	ACUGCAU	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg18_v1_chr8_-_30826074_30826149	0.0444369	ACUGCAU	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg18_v1_chr16_+_79626817_79627211	0.0443363	ACUGCAU	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr17_+_70244553_70244743	0.0426717	ACUGCAU	CR601310|RAB37|326624|RAB37, member RAS oncogene family	NM_001163989|RAB37|326624|RAB37, member RAS oncogene family	AK303442|RAB37|326624|RAB37, member RAS oncogene family
hg18_v1_chr13_-_52320774_52320779	0.0424271	ACUGCAU	AF061573|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8
hg18_v1_chr5_+_149131695_149131695	0.0421303	ACUGCAU	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg18_v1_chr12_+_68418829_68418983	0.0413035	ACUGCAU	AK314547|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_022456|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_175624|RAB3IP|117177|RAB3A interacting protein (rabin3)	AJ312896|RAB3IP|117177|RAB3A interacting protein (rabin3)	AJ312898|RAB3IP|117177|RAB3A interacting protein (rabin3)	AJ312900|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK026201|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK225441|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC014553|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC059358|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr17_-_33043514_33043613	0.0410268	ACUGCAU	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr3_-_52287695_52287698	0.0408696	ACUGCAU	NM_025222|WDR82|80335|WD repeat domain 82
hg18_v1_chrX_-_108863165_108863276	0.0404891	ACUGCAU	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4	AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4	AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4	NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4	NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4
hg18_v1_chr3_+_186563529_186563723	0.0404022	ACUGCAU	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg18_v1_chr21_+_37661728_37661752	0.0398379	ACUGCAU	AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr7_-_72771853_72772026	0.0393641	ACUGCAU	AB086954|STX1A|6804|syntaxin 1A (brain)	CR457018|STX1A|6804|syntaxin 1A (brain)	D37932|STX1A|6804|syntaxin 1A (brain)	GQ129291|STX1A|6804|syntaxin 1A (brain)	GQ129292|STX1A|6804|syntaxin 1A (brain)	L37792|STX1A|6804|syntaxin 1A (brain)	AK313980|STX1A|6804|syntaxin 1A (brain)	BC064644|STX1A|6804|syntaxin 1A (brain)	BC000444|STX1A|6804|syntaxin 1A (brain)	BC003011|STX1A|6804|syntaxin 1A (brain)	AK299959|STX1A|6804|syntaxin 1A (brain)	NM_001165903|STX1A|6804|syntaxin 1A (brain)	NM_004603|STX1A|6804|syntaxin 1A (brain)
hg18_v1_chr2_-_37047113_37047166	0.0388256	ACUGCAU	BC106879|STRN|6801|striatin, calmodulin binding protein	AJ223814|STRN|6801|striatin, calmodulin binding protein	BC106878|STRN|6801|striatin, calmodulin binding protein	NM_003162|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr1_-_215377718_215377719	0.0388157	ACUGCAU	CR749497|ESRRG|2104|estrogen-related receptor gamma	BX647076|ESRRG|2104|estrogen-related receptor gamma	NM_001134285|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr6_+_64339869_64339881	0.0387163	ACUGCAU	BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr12_+_97563049_97563208	0.0385629	ACUGCAU	AK307509|APAF1|317|apoptotic peptidase activating factor 1	AF013263|APAF1|317|apoptotic peptidase activating factor 1	NM_001160|APAF1|317|apoptotic peptidase activating factor 1	NM_013229|APAF1|317|apoptotic peptidase activating factor 1	NM_181861|APAF1|317|apoptotic peptidase activating factor 1	NM_181868|APAF1|317|apoptotic peptidase activating factor 1	NM_181869|APAF1|317|apoptotic peptidase activating factor 1
hg18_v1_chr13_-_35603513_35603520	0.0373779	ACUGCAU	NM_004734|DCLK1|9201|doublecortin-like kinase 1
hg18_v1_chr15_-_99609648_99609668	0.0370972	ACUGCAU	BC046247|CHSY1|22856|chondroitin sulfate synthase 1	AY358529|CHSY1|22856|chondroitin sulfate synthase 1	AB023207|CHSY1|22856|chondroitin sulfate synthase 1	NM_014918|CHSY1|22856|chondroitin sulfate synthase 1
hg18_v1_chr2_-_85749374_85749374	0.0368541	ACUGCAU	CR601923|SFTPB|6439|surfactant protein B	NM_000542|SFTPB|6439|surfactant protein B	NM_198843|SFTPB|6439|surfactant protein B
hg18_v1_chr12_+_19483578_19483995	0.0368501	ACUGCAU	AK131361|AEBP2|121536|AE binding protein 2	NM_001114176|AEBP2|121536|AE binding protein 2	NM_153207|AEBP2|121536|AE binding protein 2	AK126973|AEBP2|121536|AE binding protein 2	BC022220|AEBP2|121536|AE binding protein 2
hg18_v1_chr1_-_152162074_152162076	0.0367659	ACUGCAU	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chr16_+_15950707_15951024	0.0367099	ACUGCAU	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg18_v1_chr7_-_93471463_93471638	0.0364885	ACUGCAU	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR605582|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR601371|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg18_v1_chr1_-_233880676_233880676	0.0364285	ACUGCAU	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4
hg18_v1_chr7_+_116907252_116907297	0.0362876	ACUGCAU	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg18_v1_chr2_-_206659140_206659172	0.0360513	ACUGCAU	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg18_v1_chr17_+_56032271_56032381	0.0358934	ACUGCAU	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	CR618625|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr2_+_190981257_190981360	0.0358618	ACUGCAU	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr3_-_13089547_13089649	0.0354064	ACUGCAU	AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1	NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1
hg18_v1_chr2_-_100125402_100125468	0.0349006	ACUGCAU	BC036895|AFF3|3899|AF4/FMR2 family, member 3	NM_002285|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr4_+_39734902_39734952	0.0348713	ACUGCAU	AK001542|N4BP2|55728|NEDD4 binding protein 2	NM_018177|N4BP2|55728|NEDD4 binding protein 2	AB371584|N4BP2|55728|NEDD4 binding protein 2
hg18_v1_chrX_-_83329562_83329695	0.0348227	ACUGCAU	CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg18_v1_chr7_+_29840865_29840920	0.0348131	ACUGCAU	NM_001080529|WIPF3|644150|WAS/WASL interacting protein family, member 3
hg18_v1_chr4_+_72271218_72271956	0.0346641	ACUGCAU	AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr1_-_223683141_223683141	0.0342338	ACUGCAU	NM_194442|LBR|3930|lamin B receptor
hg18_v1_chr22_+_24290738_24290860	0.0340254	ACUGCAU	CR617875|ADRBK2|157|adrenergic, beta, receptor kinase 2	BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2	NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2
hg18_v1_chr8_+_17398940_17398977	0.0337045	ACUGCAU	NM_001008539|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	AK314287|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg18_v1_chr1_+_93317374_93317469	0.0336371	ACUGCAU	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	CR599562|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	CR594521|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg18_v1_chr12_+_63504618_63504683	0.0334697	ACUGCAU	NM_015279|TBC1D30|23329|TBC1 domain family, member 30	AK055404|TBC1D30|23329|TBC1 domain family, member 30
hg18_v1_chr9_+_111850698_111850763	0.033257	ACUGCAU	BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2	BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2	NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2	NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2
hg18_v1_chr5_-_137939216_137939216	0.0322772	ACUGCAU	NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)
hg18_v1_chr17_-_57497380_57497438	0.0321467	ACUGCAU	BC140891|MED13|9969|mediator complex subunit 13	AF117754|MED13|9969|mediator complex subunit 13	NM_005121|MED13|9969|mediator complex subunit 13
hg18_v1_chr16_+_22124870_22125478	0.0320779	ACUGCAU	NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase	AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase	BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase
hg18_v1_chr3_+_182112748_182113007	0.0316824	ACUGCAU	NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1	NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1	NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1
hg18_v1_chr8_+_12847521_12847553	0.0308043	ACUGCAU	AK296010|KIAA1456|57604|KIAA1456	NM_020844|KIAA1456|57604|KIAA1456
hg18_v1_chr3_+_142525744_142525748	0.0306186	ACUGCAU	BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38	NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38
hg18_v1_chr5_+_31229549_31229589	0.0304829	ACUGCAU	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chr12_-_31370387_31370425	0.0304246	ACUGCAU	BC000024|FAM60A|58516|family with sequence similarity 60, member A	NM_001135811|FAM60A|58516|family with sequence similarity 60, member A	NM_021238|FAM60A|58516|family with sequence similarity 60, member A	NM_001135812|FAM60A|58516|family with sequence similarity 60, member A
hg18_v1_chr13_+_57103789_57103789	0.0303875	ACUGCAU	NM_001040429|PCDH17|27253|protocadherin 17
hg18_v1_chr22_-_22422951_22423367	0.0297581	ACUGCAU	CR456615|ZNF70|7621|zinc finger protein 70	BC040161|ZNF70|7621|zinc finger protein 70	NM_021916|ZNF70|7621|zinc finger protein 70
hg18_v1_chr12_-_40824699_40824994	0.0294303	ACUGCAU	AK125141|GXYLT1|283464|glucoside xylosyltransferase 1	NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1	NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1	BC030023|GXYLT1|283464|glucoside xylosyltransferase 1
hg18_v1_chr2_-_24003403_24003497	0.0291828	ACUGCAU	BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B	NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B	BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B	AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B
hg18_v1_chr20_+_254205_254268	0.029132	ACUGCAU	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg18_v1_chr1_+_211098219_211098388	0.0290579	ACUGCAU	AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1	NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1	AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1	BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1
hg18_v1_chr6_-_13594361_13594393	0.0287884	ACUGCAU	AF264036|C6orf114|85411|chromosome 6 open reading frame 114	NM_033069|C6orf114|85411|chromosome 6 open reading frame 114
hg18_v1_chr3_+_174598937_174598937	0.0287407	ACUGCAU	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg18_v1_chr2_-_98714020_98714070	0.0284425	ACUGCAU	CR610346|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr12_-_91063441_91063803	0.0284259	ACUGCAU	BT019839|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019840|BTG1|694|B-cell translocation gene 1, anti-proliferative	BT019841|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR456876|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR541782|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176394|BTG1|694|B-cell translocation gene 1, anti-proliferative	EU176740|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR590022|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR620161|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR595512|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR601264|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609466|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616928|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative	BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR617798|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604248|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR604369|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR606339|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR609805|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR614716|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR615938|BTG1|694|B-cell translocation gene 1, anti-proliferative	CR616550|BTG1|694|B-cell translocation gene 1, anti-proliferative	X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative	AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative	NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative
hg18_v1_chr22_-_42589543_42589730	0.0283205	ACUGCAU	AK295399|SULT4A1|25830|sulfotransferase family 4A, member 1	AF115311|SULT4A1|25830|sulfotransferase family 4A, member 1	AL590119|SULT4A1|25830|sulfotransferase family 4A, member 1	CR456588|SULT4A1|25830|sulfotransferase family 4A, member 1	CU013188|SULT4A1|25830|sulfotransferase family 4A, member 1	CU013476|SULT4A1|25830|sulfotransferase family 4A, member 1	DQ892373|SULT4A1|25830|sulfotransferase family 4A, member 1	DQ895583|SULT4A1|25830|sulfotransferase family 4A, member 1	BC022459|SULT4A1|25830|sulfotransferase family 4A, member 1	AF176342|SULT4A1|25830|sulfotransferase family 4A, member 1	AF251263|SULT4A1|25830|sulfotransferase family 4A, member 1	AK313048|SULT4A1|25830|sulfotransferase family 4A, member 1	AK294622|SULT4A1|25830|sulfotransferase family 4A, member 1	AF188698|SULT4A1|25830|sulfotransferase family 4A, member 1	BC028171|SULT4A1|25830|sulfotransferase family 4A, member 1	NM_014351|SULT4A1|25830|sulfotransferase family 4A, member 1	BC030665|SULT4A1|25830|sulfotransferase family 4A, member 1
hg18_v1_chr6_-_116681863_116681994	0.0282796	ACUGCAU	BC040453|TSPYL4|23270|TSPY-like 4	AB018264|TSPYL4|23270|TSPY-like 4	NM_021648|TSPYL4|23270|TSPY-like 4	AK302542|TSPYL4|23270|TSPY-like 4	AK091559|TSPYL4|23270|TSPY-like 4
hg18_v1_chr1_+_42619014_42619126	0.028266	ACUGCAU	NM_173642|RIMKLA|284716|ribosomal modification protein rimK-like family member A	BC039737|RIMKLA|284716|ribosomal modification protein rimK-like family member A
hg18_v1_chr6_+_126153693_126153737	0.0278836	ACUGCAU	NM_001122842|NCOA7|135112|nuclear receptor coactivator 7	NM_181782|NCOA7|135112|nuclear receptor coactivator 7
hg18_v1_chr13_-_71339313_71339558	0.0277141	ACUGCAU	AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)	AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)	NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)	NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)	NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)
hg18_v1_chr4_-_84625241_84625355	0.0275637	ACUGCAU	BC016905|FAM175A|84142|family with sequence similarity 175, member A	EF531340|FAM175A|84142|family with sequence similarity 175, member A	BC039573|FAM175A|84142|family with sequence similarity 175, member A	AY358576|FAM175A|84142|family with sequence similarity 175, member A	AK022704|FAM175A|84142|family with sequence similarity 175, member A	AK023676|FAM175A|84142|family with sequence similarity 175, member A	NM_139076|FAM175A|84142|family with sequence similarity 175, member A
hg18_v1_chr8_+_104900591_104900911	0.0270709	ACUGCAU	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr17_-_41626032_41626140	0.0270404	ACUGCAU	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr1_-_223682394_223682406	0.0269326	ACUGCAU	NM_002296|LBR|3930|lamin B receptor
hg18_v1_chr17_-_55958274_55958365	0.0266149	ACUGCAU	AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg18_v1_chr13_-_20374895_20374979	0.0262716	ACUGCAU	NM_022459|XPO4|64328|exportin 4
hg18_v1_chr2_+_208284484_208284609	0.0261794	ACUGCAU	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr2_+_26422404_26422486	0.0261545	ACUGCAU	NM_033505|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK095620|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
hg18_v1_chr7_-_92303865_92303876	0.0260605	ACUGCAU	NM_001145306|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr12_-_8656705_8656722	0.0258953	ACUGCAU	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chr14_+_99774854_99774936	0.0257831	ACUGCAU	NM_003403|YY1|7528|YY1 transcription factor
hg18_v1_chr5_+_112340326_112340528	0.0257457	ACUGCAU	AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	CR612463|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)
hg18_v1_chr3_-_71886203_71886221	0.0254558	ACUGCAU	NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3
hg18_v1_chr22_-_30476119_30476137	0.0253432	ACUGCAU	NM_173566|PRR14L|253143|proline rich 14-like
hg18_v1_chr9_+_111927601_111927626	0.0253174	ACUGCAU	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2	AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2
hg18_v1_chr17_+_27493486_27493597	0.0251992	ACUGCAU	BC060781|RHOT1|55288|ras homolog gene family, member T1	NM_001033566|RHOT1|55288|ras homolog gene family, member T1	NM_001033568|RHOT1|55288|ras homolog gene family, member T1	NM_018307|RHOT1|55288|ras homolog gene family, member T1	AJ496730|RHOT1|55288|ras homolog gene family, member T1
hg18_v1_chr18_+_58341637_58341831	0.0251903	ACUGCAU	NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2	BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2
hg18_v1_chr2_+_60836858_60837119	0.0251706	ACUGCAU	NM_022894|PAPOLG|64895|poly(A) polymerase gamma	AF312211|PAPOLG|64895|poly(A) polymerase gamma	BX647824|PAPOLG|64895|poly(A) polymerase gamma	BC016738|PAPOLG|64895|poly(A) polymerase gamma	AK314663|PAPOLG|64895|poly(A) polymerase gamma	BC068493|PAPOLG|64895|poly(A) polymerase gamma	BC110906|PAPOLG|64895|poly(A) polymerase gamma	AK021867|PAPOLG|64895|poly(A) polymerase gamma	BC111701|PAPOLG|64895|poly(A) polymerase gamma	BC113747|PAPOLG|64895|poly(A) polymerase gamma	AY029162|PAPOLG|64895|poly(A) polymerase gamma	AJ308101|PAPOLG|64895|poly(A) polymerase gamma	AK023544|PAPOLG|64895|poly(A) polymerase gamma
hg18_v1_chr13_+_44937025_44937172	0.0248891	ACUGCAU	CR609778|COG3|83548|component of oligomeric golgi complex 3	AF349676|COG3|83548|component of oligomeric golgi complex 3	AF332595|COG3|83548|component of oligomeric golgi complex 3	AK026305|COG3|83548|component of oligomeric golgi complex 3	AK225466|COG3|83548|component of oligomeric golgi complex 3	AK225952|COG3|83548|component of oligomeric golgi complex 3	NM_031431|COG3|83548|component of oligomeric golgi complex 3	BX648211|COG3|83548|component of oligomeric golgi complex 3	AK294959|COG3|83548|component of oligomeric golgi complex 3	AK304248|COG3|83548|component of oligomeric golgi complex 3	AK314387|COG3|83548|component of oligomeric golgi complex 3	BC038953|COG3|83548|component of oligomeric golgi complex 3
hg18_v1_chr4_-_84150997_84151040	0.0245116	ACUGCAU	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr5_-_133332173_133332376	0.024502	ACUGCAU	DQ892022|C5orf15|56951|chromosome 5 open reading frame 15	DQ895214|C5orf15|56951|chromosome 5 open reading frame 15	BC020875|C5orf15|56951|chromosome 5 open reading frame 15	AK298515|C5orf15|56951|chromosome 5 open reading frame 15	AK315362|C5orf15|56951|chromosome 5 open reading frame 15	AY157581|C5orf15|56951|chromosome 5 open reading frame 15	AK074963|C5orf15|56951|chromosome 5 open reading frame 15	NM_020199|C5orf15|56951|chromosome 5 open reading frame 15	AF226055|C5orf15|56951|chromosome 5 open reading frame 15
hg18_v1_chr7_+_29486010_29486010	0.0244602	ACUGCAU	NM_001039936|CHN2|1124|chimerin (chimaerin) 2
hg18_v1_chr12_-_30740072_30740195	0.0244355	ACUGCAU	NM_006390|IPO8|10526|importin 8
hg18_v1_chr11_-_27484874_27484903	0.0239984	ACUGCAU	BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)	BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)	AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)	AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)	AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)	NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)
hg18_v1_chr6_+_163755658_163755666	0.023967	ACUGCAU	AB067798|QKI|9444|quaking homolog, KH domain RNA binding (mouse)	AB067799|QKI|9444|quaking homolog, KH domain RNA binding (mouse)	AB067800|QKI|9444|quaking homolog, KH domain RNA binding (mouse)	AB067801|QKI|9444|quaking homolog, KH domain RNA binding (mouse)	NM_006775|QKI|9444|quaking homolog, KH domain RNA binding (mouse)	NM_206853|QKI|9444|quaking homolog, KH domain RNA binding (mouse)	NM_206854|QKI|9444|quaking homolog, KH domain RNA binding (mouse)	NM_206855|QKI|9444|quaking homolog, KH domain RNA binding (mouse)
hg18_v1_chr4_-_41849651_41849651	0.0239574	ACUGCAU	AB126828|BEND4|389206|BEN domain containing 4	AB126829|BEND4|389206|BEN domain containing 4	NM_001159547|BEND4|389206|BEN domain containing 4	NM_207406|BEND4|389206|BEN domain containing 4
hg18_v1_chr12_+_121803255_121803433	0.0239017	ACUGCAU	AF038554|DENR|8562|density-regulated protein	AK299463|DENR|8562|density-regulated protein	NM_003677|DENR|8562|density-regulated protein	CR622756|DENR|8562|density-regulated protein	AB014731|DENR|8562|density-regulated protein	BC007860|DENR|8562|density-regulated protein	BC000925|DENR|8562|density-regulated protein
hg18_v1_chr4_+_57468792_57468833	0.0237694	ACUGCAU	NM_005612|REST|5978|RE1-silencing transcription factor
hg18_v1_chr11_-_26700121_26700149	0.0235984	ACUGCAU	BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12
hg18_v1_chr9_-_99974994_99974994	0.0232708	ACUGCAU	NM_003389|CORO2A|7464|coronin, actin binding protein, 2A
hg18_v1_chr20_-_4930133_4930188	0.0231269	ACUGCAU	D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2
hg18_v1_chr9_-_23816062_23816062	0.0231082	ACUGCAU	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr2_-_39201066_39201107	0.0228348	ACUGCAU	L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)	NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)
hg18_v1_chr10_-_91395194_91395308	0.0227948	ACUGCAU	NM_148977|PANK1|53354|pantothenate kinase 1	AY027661|PANK1|53354|pantothenate kinase 1
hg18_v1_chr10_-_75580531_75580858	0.022287	ACUGCAU	CR603917|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit
hg18_v1_chr3_-_143201878_143201918	0.0222867	ACUGCAU	AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr6_-_13922525_13922969	0.0221785	ACUGCAU	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chr18_-_46600295_46600431	0.022135	ACUGCAU	AB042647|MRO|83876|maestro	AK054702|MRO|83876|maestro	AK295666|MRO|83876|maestro	NM_001127175|MRO|83876|maestro	NM_001127176|MRO|83876|maestro	NM_031939|MRO|83876|maestro
hg18_v1_chr18_-_46605730_46605751	0.0221096	ACUGCAU	BC029860|MRO|83876|maestro	NM_001127174|MRO|83876|maestro
hg18_v1_chr17_+_38306339_38306419	0.0219942	ACUGCAU	AK303771|G6PC|2538|glucose-6-phosphatase, catalytic subunit	NM_000151|G6PC|2538|glucose-6-phosphatase, catalytic subunit	U01120|G6PC|2538|glucose-6-phosphatase, catalytic subunit	AK313982|G6PC|2538|glucose-6-phosphatase, catalytic subunit	BC130478|G6PC|2538|glucose-6-phosphatase, catalytic subunit	BC136369|G6PC|2538|glucose-6-phosphatase, catalytic subunit
hg18_v1_chr4_+_144325502_144325527	0.0219395	ACUGCAU	BC039115|USP38|84640|ubiquitin specific peptidase 38	NM_032557|USP38|84640|ubiquitin specific peptidase 38
hg18_v1_chr12_-_40918249_40918355	0.0218979	ACUGCAU	EU446625|YAF2|10138|YY1 associated factor 2	EU446756|YAF2|10138|YY1 associated factor 2	BC037777|YAF2|10138|YY1 associated factor 2	AK127531|YAF2|10138|YY1 associated factor 2	AK291355|YAF2|10138|YY1 associated factor 2	AK296191|YAF2|10138|YY1 associated factor 2	AK294260|YAF2|10138|YY1 associated factor 2	NM_001190977|YAF2|10138|YY1 associated factor 2
hg18_v1_chr19_+_57648570_57648708	0.021853	ACUGCAU	AB091373|ZNF578|147660|zinc finger protein 578	AB091374|ZNF578|147660|zinc finger protein 578	AK299106|ZNF578|147660|zinc finger protein 578	NM_001099694|ZNF578|147660|zinc finger protein 578	AB091376|ZNF578|147660|zinc finger protein 578	AB091375|ZNF578|147660|zinc finger protein 578
hg18_v1_chrX_-_131451675_131451753	0.0217297	ACUGCAU	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr8_+_92151599_92151781	0.0214315	ACUGCAU	NM_016023|OTUD6B|51633|OTU domain containing 6B	BX647772|OTUD6B|51633|OTU domain containing 6B	AK293843|OTUD6B|51633|OTU domain containing 6B	BC029760|OTUD6B|51633|OTU domain containing 6B	AK310823|OTUD6B|51633|OTU domain containing 6B	AK291646|OTUD6B|51633|OTU domain containing 6B	AF151836|OTUD6B|51633|OTU domain containing 6B
hg18_v1_chr2_+_206847658_206847767	0.0211392	ACUGCAU	AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2	NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2
hg18_v1_chr4_-_84152985_84153120	0.020931	ACUGCAU	AK292769|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115007|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr2_+_165858586_165858586	0.0208975	ACUGCAU	NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr3_-_131095061_131095156	0.0207263	ACUGCAU	NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1
hg18_v1_chr8_+_95801277_95801356	0.0207092	ACUGCAU	NM_181787|DPY19L4|286148|dpy-19-like 4 (C. elegans)	AK123682|DPY19L4|286148|dpy-19-like 4 (C. elegans)	BX538174|DPY19L4|286148|dpy-19-like 4 (C. elegans)	BX538048|DPY19L4|286148|dpy-19-like 4 (C. elegans)	BC110870|DPY19L4|286148|dpy-19-like 4 (C. elegans)
hg18_v1_chr4_-_42353640_42354051	0.0206491	ACUGCAU	BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg18_v1_chr4_-_146320243_146320281	0.0203543	ACUGCAU	AK302581|OTUD4|54726|OTU domain containing 4	NM_001102653|OTUD4|54726|OTU domain containing 4
hg18_v1_chr19_+_40795456_40795566	0.0203443	ACUGCAU	BC064390|HAUS5|23354|HAUS augmin-like complex, subunit 5	NM_015302|HAUS5|23354|HAUS augmin-like complex, subunit 5	BC171905|HAUS5|23354|HAUS augmin-like complex, subunit 5	BC157882|HAUS5|23354|HAUS augmin-like complex, subunit 5	AK307703|HAUS5|23354|HAUS augmin-like complex, subunit 5	AB020648|HAUS5|23354|HAUS augmin-like complex, subunit 5	BC013947|HAUS5|23354|HAUS augmin-like complex, subunit 5
hg18_v1_chr1_+_196392513_196392842	0.0202368	ACUGCAU	NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7	AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7	CR614163|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7
hg18_v1_chr7_+_7188667_7188878	0.0201911	ACUGCAU	NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg18_v1_chr1_+_52964609_52964804	0.0200103	ACUGCAU	AK296460|ZYG11B|79699|zyg-11 homolog B (C. elegans)	NM_024646|ZYG11B|79699|zyg-11 homolog B (C. elegans)	AB051517|ZYG11B|79699|zyg-11 homolog B (C. elegans)
hg18_v1_chr1_+_216525251_216525259	0.0196188	ACUGCAU	NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg18_v1_chr10_-_118022965_118023151	0.0191653	ACUGCAU	AF038421|GFRA1|2674|GDNF family receptor alpha 1	NM_005264|GFRA1|2674|GDNF family receptor alpha 1
hg18_v1_chr19_+_19357629_19357783	0.0189013	ACUGCAU	NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A	AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A
hg18_v1_chr2_+_138975819_138975908	0.0185423	ACUGCAU	NM_001001664|SPOPL|339745|speckle-type POZ protein-like	BC071613|SPOPL|339745|speckle-type POZ protein-like
hg18_v1_chr6_-_127882192_127882192	0.0182584	ACUGCAU	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg18_v1_chr13_+_41744255_41744316	0.0182166	ACUGCAU	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11	NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11
hg18_v1_chr17_-_41658493_41658516	0.0180678	ACUGCAU	AK291259|KIAA1267|284058|KIAA1267	NM_001193465|KIAA1267|284058|KIAA1267
hg18_v1_chr22_+_38770610_38771101	0.0180499	ACUGCAU	NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr6_-_127822227_127822227	0.0180204	ACUGCAU	NM_014702|KIAA0408|9729|KIAA0408
hg18_v1_chr7_+_117611321_117611494	0.0180148	ACUGCAU	NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit
hg18_v1_chr12_+_60940404_60940516	0.0177337	ACUGCAU	AF153604|USP15|9958|ubiquitin specific peptidase 15	AK292337|USP15|9958|ubiquitin specific peptidase 15	AK023703|USP15|9958|ubiquitin specific peptidase 15	BC063454|USP15|9958|ubiquitin specific peptidase 15	AK297759|USP15|9958|ubiquitin specific peptidase 15	BC020688|USP15|9958|ubiquitin specific peptidase 15	AF106069|USP15|9958|ubiquitin specific peptidase 15	BC125123|USP15|9958|ubiquitin specific peptidase 15	NM_006313|USP15|9958|ubiquitin specific peptidase 15	BC110908|USP15|9958|ubiquitin specific peptidase 15	CR600092|USP15|9958|ubiquitin specific peptidase 15	AB011101|USP15|9958|ubiquitin specific peptidase 15	AF013990|USP15|9958|ubiquitin specific peptidase 15
hg18_v1_chr4_-_66218247_66218247	0.0175019	ACUGCAU	AK307826|EPHA5|2044|EPH receptor A5	NM_004439|EPHA5|2044|EPH receptor A5	NM_182472|EPHA5|2044|EPH receptor A5
hg18_v1_chr1_-_55453612_55453636	0.0173977	ACUGCAU	NM_015306|USP24|23358|ubiquitin specific peptidase 24
hg18_v1_chr22_+_38903825_38904066	0.0172121	ACUGCAU	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr3_+_150330060_150330200	0.0172091	ACUGCAU	AY033141|HPS3|84343|Hermansky-Pudlak syndrome 3	NM_032383|HPS3|84343|Hermansky-Pudlak syndrome 3	AK291631|HPS3|84343|Hermansky-Pudlak syndrome 3	AK055245|HPS3|84343|Hermansky-Pudlak syndrome 3	BC040359|HPS3|84343|Hermansky-Pudlak syndrome 3	AK298478|HPS3|84343|Hermansky-Pudlak syndrome 3	CR600710|HPS3|84343|Hermansky-Pudlak syndrome 3	DQ891178|HPS3|84343|Hermansky-Pudlak syndrome 3	DQ894360|HPS3|84343|Hermansky-Pudlak syndrome 3
hg18_v1_chr17_-_57360091_57360158	0.0170874	ACUGCAU	AB033113|INTS2|57508|integrator complex subunit 2	AK308307|INTS2|57508|integrator complex subunit 2	AK299032|INTS2|57508|integrator complex subunit 2	AL136800|INTS2|57508|integrator complex subunit 2	NM_020748|INTS2|57508|integrator complex subunit 2
hg18_v1_chr4_-_159812429_159812651	0.0170133	ACUGCAU	AK027539|C4orf46|201725|chromosome 4 open reading frame 46	BC065017|C4orf46|201725|chromosome 4 open reading frame 46	BC094775|C4orf46|201725|chromosome 4 open reading frame 46	NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46
hg18_v1_chr5_-_167938991_167939195	0.0169319	ACUGCAU	BC013705|PANK3|79646|pantothenate kinase 3	NM_024594|PANK3|79646|pantothenate kinase 3
hg18_v1_chr20_+_2030527_2030676	0.0168741	ACUGCAU	GQ281297|STK35|140901|serine/threonine kinase 35	NM_080836|STK35|140901|serine/threonine kinase 35	AK314728|STK35|140901|serine/threonine kinase 35
hg18_v1_chr12_-_52281050_52281071	0.0167612	ACUGCAU	X57197|ATF7|11016|activating transcription factor 7	NM_001130059|ATF7|11016|activating transcription factor 7
hg18_v1_chr6_+_20510019_20510145	0.0164262	ACUGCAU	BC099908|E2F3|1871|E2F transcription factor 3	NM_001949|E2F3|1871|E2F transcription factor 3	CR597993|E2F3|1871|E2F transcription factor 3
hg18_v1_chr9_-_74169649_74170191	0.0163977	ACUGCAU	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg18_v1_chr17_+_26446067_26446073	0.0161541	ACUGCAU	D12625|NF1|4763|neurofibromin 1	NM_000267|NF1|4763|neurofibromin 1	NM_001042492|NF1|4763|neurofibromin 1	NM_001128147|NF1|4763|neurofibromin 1
hg18_v1_chr17_-_41625921_41625942	0.0159613	ACUGCAU	BX538006|KIAA1267|284058|KIAA1267	NM_001193466|KIAA1267|284058|KIAA1267
hg18_v1_chr4_+_57469821_57469873	0.0159594	ACUGCAU	NM_001193508|REST|5978|RE1-silencing transcription factor
hg18_v1_chr2_+_165804157_165804200	0.0159022	ACUGCAU	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr7_+_101247601_101247601	0.0158846	ACUGCAU	M74099|CUX1|1523|cut-like homeobox 1	NM_181552|CUX1|1523|cut-like homeobox 1
hg18_v1_chr6_+_4781330_4781330	0.0156441	ACUGCAU	AK296985|CDYL|9425|chromodomain protein, Y-like	NM_001143970|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr15_-_53276420_53276522	0.0154669	ACUGCAU	BC008449|RSL24D1|51187|ribosomal L24 domain containing 1	BC014576|RSL24D1|51187|ribosomal L24 domain containing 1	AK315431|RSL24D1|51187|ribosomal L24 domain containing 1	BC005344|RSL24D1|51187|ribosomal L24 domain containing 1	BC009593|RSL24D1|51187|ribosomal L24 domain containing 1	BC009604|RSL24D1|51187|ribosomal L24 domain containing 1	BC016312|RSL24D1|51187|ribosomal L24 domain containing 1	BC016331|RSL24D1|51187|ribosomal L24 domain containing 1	BC026266|RSL24D1|51187|ribosomal L24 domain containing 1	BC016725|RSL24D1|51187|ribosomal L24 domain containing 1	BC008499|RSL24D1|51187|ribosomal L24 domain containing 1	BC035995|RSL24D1|51187|ribosomal L24 domain containing 1	BC008409|RSL24D1|51187|ribosomal L24 domain containing 1	AF165521|RSL24D1|51187|ribosomal L24 domain containing 1	AF201949|RSL24D1|51187|ribosomal L24 domain containing 1	AF212226|RSL24D1|51187|ribosomal L24 domain containing 1	NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1
hg18_v1_chr6_-_57194163_57194215	0.0154631	ACUGCAU	AB034244|RAB23|51715|RAB23, member RAS oncogene family	AK313796|RAB23|51715|RAB23, member RAS oncogene family	NM_183227|RAB23|51715|RAB23, member RAS oncogene family
hg18_v1_chr14_+_31616196_31616318	0.015444	ACUGCAU	NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5	NM_001173|ARHGAP5|394|Rho GTPase activating protein 5	U17032|ARHGAP5|394|Rho GTPase activating protein 5	BC129928|ARHGAP5|394|Rho GTPase activating protein 5	BC129929|ARHGAP5|394|Rho GTPase activating protein 5
hg18_v1_chr2_-_202215593_202215684	0.0153604	ACUGCAU	AK090601|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC029611|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_152388|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr12_+_70519753_70519852	0.0152199	ACUGCAU	NM_001146213|TBC1D15|64786|TBC1 domain family, member 15	NM_001146214|TBC1D15|64786|TBC1 domain family, member 15	NM_022771|TBC1D15|64786|TBC1 domain family, member 15	AK022147|TBC1D15|64786|TBC1 domain family, member 15	AK297626|TBC1D15|64786|TBC1 domain family, member 15	AK307922|TBC1D15|64786|TBC1 domain family, member 15	BC028352|TBC1D15|64786|TBC1 domain family, member 15	AK225747|TBC1D15|64786|TBC1 domain family, member 15	AL833639|TBC1D15|64786|TBC1 domain family, member 15	AK225221|TBC1D15|64786|TBC1 domain family, member 15	AK292306|TBC1D15|64786|TBC1 domain family, member 15	AB449901|TBC1D15|64786|TBC1 domain family, member 15
hg18_v1_chr3_-_44992604_44992687	0.0151987	ACUGCAU	BC015467|ZDHHC3|51304|zinc finger, DHHC-type containing 3	AF247703|ZDHHC3|51304|zinc finger, DHHC-type containing 3	NM_001135179|ZDHHC3|51304|zinc finger, DHHC-type containing 3	NM_016598|ZDHHC3|51304|zinc finger, DHHC-type containing 3
hg18_v1_chr8_+_38763878_38763881	0.0151985	ACUGCAU	AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr2_+_191222077_191222346	0.0150676	ACUGCAU	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)	BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)	AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg18_v1_chr12_+_44409762_44409967	0.0150059	ACUGCAU	AY727870|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	DQ096628|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	NM_152641|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	CR749833|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)
hg18_v1_chr12_-_107775462_107775640	0.0150048	ACUGCAU	BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)	CR623842|SSH1|54434|slingshot homolog 1 (Drosophila)
hg18_v1_chr12_-_52306348_52306493	0.0149219	ACUGCAU	BC136302|ATF7|11016|activating transcription factor 7	X52943|ATF7|11016|activating transcription factor 7	AK298853|ATF7|11016|activating transcription factor 7	AK313507|ATF7|11016|activating transcription factor 7	BC032433|ATF7|11016|activating transcription factor 7	BC140006|ATF7|11016|activating transcription factor 7	NM_001130060|ATF7|11016|activating transcription factor 7	NM_006856|ATF7|11016|activating transcription factor 7
hg18_v1_chr8_-_56848423_56848479	0.0149198	ACUGCAU	AK308247|TMEM68|137695|transmembrane protein 68	AK056932|TMEM68|137695|transmembrane protein 68	NM_152417|TMEM68|137695|transmembrane protein 68	BC020835|TMEM68|137695|transmembrane protein 68	BC071636|TMEM68|137695|transmembrane protein 68
hg18_v1_chr2_+_166034402_166034458	0.0148255	ACUGCAU	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr7_+_130663134_130663158	0.0147218	ACUGCAU	NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	CR615360|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs
hg18_v1_chr4_+_39376058_39376341	0.0145269	ACUGCAU	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	CR606205|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
hg18_v1_chr2_-_60633908_60634145	0.0145055	ACUGCAU	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg18_v1_chr1_+_26310854_26310999	0.014442	ACUGCAU	AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like	NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like	AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like	BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like
hg18_v1_chr1_+_39569396_39569396	0.0143826	ACUGCAU	AF317696|MACF1|23499|microtubule-actin crosslinking factor 1	NM_033044|MACF1|23499|microtubule-actin crosslinking factor 1
hg18_v1_chr11_-_85457753_85457791	0.0143818	ACUGCAU	NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein
hg18_v1_chr3_+_50581903_50582001	0.0143048	ACUGCAU	BX537562|HEMK1|51409|HemK methyltransferase family member 1	NM_016173|HEMK1|51409|HemK methyltransferase family member 1	CR600760|HEMK1|51409|HemK methyltransferase family member 1	AK314023|HEMK1|51409|HemK methyltransferase family member 1	AF172244|HEMK1|51409|HemK methyltransferase family member 1	AK124369|HEMK1|51409|HemK methyltransferase family member 1
hg18_v1_chr3_+_50687675_50687698	0.0142061	ACUGCAU	AY254099|DOCK3|1795|dedicator of cytokinesis 3	NM_004947|DOCK3|1795|dedicator of cytokinesis 3	AY145303|DOCK3|1795|dedicator of cytokinesis 3
hg18_v1_chr12_+_68459015_68459087	0.0141114	ACUGCAU	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr2_+_99320181_99320449	0.0140356	ACUGCAU	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr1_+_65385799_65386100	0.0139912	ACUGCAU	NM_203464|AK4|205|adenylate kinase 4	BC146653|AK4|205|adenylate kinase 4	BC016180|AK4|205|adenylate kinase 4	AK309057|AK4|205|adenylate kinase 4	BC066944|AK4|205|adenylate kinase 4	NM_001005353|AK4|205|adenylate kinase 4
hg18_v1_chr7_-_78920806_78920825	0.0138679	ACUGCAU	AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg18_v1_chr2_+_228045121_228045380	0.0137233	ACUGCAU	NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1	NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1	NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1	NM_004504|AGFG1|3267|ArfGAP with FG repeats 1	BC030592|AGFG1|3267|ArfGAP with FG repeats 1	X89478|AGFG1|3267|ArfGAP with FG repeats 1	BC096272|AGFG1|3267|ArfGAP with FG repeats 1	BC096273|AGFG1|3267|ArfGAP with FG repeats 1	BC096274|AGFG1|3267|ArfGAP with FG repeats 1	BC096275|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr2_+_86186815_86186890	0.0136742	ACUGCAU	NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3	AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3	BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3
hg18_v1_chr1_-_214963279_214963429	0.0136282	ACUGCAU	AF117255|ESRRG|2104|estrogen-related receptor gamma	BC008218|ESRRG|2104|estrogen-related receptor gamma	AY388456|ESRRG|2104|estrogen-related receptor gamma	AK291647|ESRRG|2104|estrogen-related receptor gamma	AB020639|ESRRG|2104|estrogen-related receptor gamma	AK290945|ESRRG|2104|estrogen-related receptor gamma	BC064700|ESRRG|2104|estrogen-related receptor gamma	NM_001438|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr17_+_54188230_54188357	0.013612	ACUGCAU	AB028995|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E	AF260269|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E	BC151228|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E	NM_014906|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E	BC136290|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E	BC143845|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E	AF520614|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg18_v1_chrX_-_54401161_54401173	0.0135921	ACUGCAU	AY352048|WNK3|65267|WNK lysine deficient protein kinase 3	NM_001002838|WNK3|65267|WNK lysine deficient protein kinase 3	NM_020922|WNK3|65267|WNK lysine deficient protein kinase 3
hg18_v1_chr14_+_44501083_44501234	0.0135885	ACUGCAU	AK295185|FAM179B|23116|family with sequence similarity 179, member B	AB007883|FAM179B|23116|family with sequence similarity 179, member B	CR749557|FAM179B|23116|family with sequence similarity 179, member B	NM_015091|FAM179B|23116|family with sequence similarity 179, member B	BC057255|FAM179B|23116|family with sequence similarity 179, member B	AK096934|FAM179B|23116|family with sequence similarity 179, member B	AK311034|FAM179B|23116|family with sequence similarity 179, member B	BX648723|FAM179B|23116|family with sequence similarity 179, member B
hg18_v1_chr1_+_109036431_109036731	0.0135758	ACUGCAU	NM_018061|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC040127|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC053838|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC034581|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC007757|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC024275|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC009453|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC016296|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AL833950|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK001192|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC130346|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC132963|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC144243|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC107801|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
hg18_v1_chr3_+_123095860_123095984	0.0135301	ACUGCAU	NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2	S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2
hg18_v1_chr19_+_61770701_61770706	0.0135035	ACUGCAU	NM_001001668|ZNF470|388566|zinc finger protein 470	BC142627|ZNF470|388566|zinc finger protein 470
hg18_v1_chr5_+_56505412_56505531	0.0134838	ACUGCAU	AK311625|GPBP1|65056|GC-rich promoter binding protein 1	NM_022913|GPBP1|65056|GC-rich promoter binding protein 1
hg18_v1_chr6_+_116528663_116528753	0.0133653	ACUGCAU	NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1	AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1	BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1	BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1	BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1	CR612669|NT5DC1|221294|5'-nucleotidase domain containing 1	CR624824|NT5DC1|221294|5'-nucleotidase domain containing 1	AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	CR623024|NT5DC1|221294|5'-nucleotidase domain containing 1
hg18_v1_chr15_+_54998115_54998124	0.0133528	ACUGCAU	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg18_v1_chr15_+_48503860_48503966	0.0132522	ACUGCAU	AK292400|USP8|9101|ubiquitin specific peptidase 8	BX537420|USP8|9101|ubiquitin specific peptidase 8	NM_001128610|USP8|9101|ubiquitin specific peptidase 8	NM_001128611|USP8|9101|ubiquitin specific peptidase 8	NM_005154|USP8|9101|ubiquitin specific peptidase 8	AK296480|USP8|9101|ubiquitin specific peptidase 8	BC038801|USP8|9101|ubiquitin specific peptidase 8	D29956|USP8|9101|ubiquitin specific peptidase 8	BC015545|USP8|9101|ubiquitin specific peptidase 8	BC110590|USP8|9101|ubiquitin specific peptidase 8	BC092443|USP8|9101|ubiquitin specific peptidase 8	BC026954|USP8|9101|ubiquitin specific peptidase 8	BC051345|USP8|9101|ubiquitin specific peptidase 8
hg18_v1_chr2_+_61098200_61098347	0.0131793	ACUGCAU	NM_002618|PEX13|5194|peroxisomal biogenesis factor 13
hg18_v1_chr11_+_117812282_117812437	0.0131054	ACUGCAU	D14540|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	NM_001197104|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	NM_005933|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	L04284|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)
hg18_v1_chr20_+_1132097_1132167	0.0130725	ACUGCAU	AK092524|C20orf202|400831|chromosome 20 open reading frame 202	NM_001009612|C20orf202|400831|chromosome 20 open reading frame 202	BC127730|C20orf202|400831|chromosome 20 open reading frame 202	BC127731|C20orf202|400831|chromosome 20 open reading frame 202	BC141955|C20orf202|400831|chromosome 20 open reading frame 202	BC141956|C20orf202|400831|chromosome 20 open reading frame 202	BC150532|C20orf202|400831|chromosome 20 open reading frame 202
hg18_v1_chrX_-_133757901_133758050	0.0128829	ACUGCAU	AM393279|FAM122B|159090|family with sequence similarity 122B	AK125991|FAM122B|159090|family with sequence similarity 122B	AK292517|FAM122B|159090|family with sequence similarity 122B	AL832218|FAM122B|159090|family with sequence similarity 122B	NM_001170756|FAM122B|159090|family with sequence similarity 122B	NM_145284|FAM122B|159090|family with sequence similarity 122B
hg18_v1_chr10_+_86078136_86078612	0.0128406	ACUGCAU	NM_018999|FAM190B|54462|family with sequence similarity 190, member B	AK298966|FAM190B|54462|family with sequence similarity 190, member B	BC030528|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr1_-_78217360_78217366	0.01271	ACUGCAU	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr5_-_64100239_64100281	0.0126367	ACUGCAU	AK094073|SREK1IP1|285672|SREK1-interacting protein 1	NM_173829|SREK1IP1|285672|SREK1-interacting protein 1
hg18_v1_chr15_-_21483503_21483548	0.0126297	ACUGCAU	U35139|NDN|4692|necdin homolog (mouse)	CR591182|NDN|4692|necdin homolog (mouse)	CR601504|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	CR618894|NDN|4692|necdin homolog (mouse)	CR590044|NDN|4692|necdin homolog (mouse)	CR595233|NDN|4692|necdin homolog (mouse)	CR595786|NDN|4692|necdin homolog (mouse)	CR599213|NDN|4692|necdin homolog (mouse)	CR590944|NDN|4692|necdin homolog (mouse)	CR593341|NDN|4692|necdin homolog (mouse)	CR596254|NDN|4692|necdin homolog (mouse)	CR596560|NDN|4692|necdin homolog (mouse)	CR597888|NDN|4692|necdin homolog (mouse)	CR598564|NDN|4692|necdin homolog (mouse)	CR609537|NDN|4692|necdin homolog (mouse)	CR609863|NDN|4692|necdin homolog (mouse)	CR611314|NDN|4692|necdin homolog (mouse)	CR616323|NDN|4692|necdin homolog (mouse)	CR619220|NDN|4692|necdin homolog (mouse)	CR619365|NDN|4692|necdin homolog (mouse)	CR622500|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)	CR614412|NDN|4692|necdin homolog (mouse)
hg18_v1_chrX_-_85189194_85189221	0.0125196	ACUGCAU	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg18_v1_chr17_-_40923907_40923967	0.0122212	ACUGCAU	NM_014798|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg18_v1_chr1_-_211031727_211031761	0.0121434	ACUGCAU	DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)
hg18_v1_chr10_+_98582648_98582788	0.0121185	ACUGCAU	NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor	AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor	AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr8_+_104582151_104582151	0.0120474	ACUGCAU	AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2	NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr5_-_79322549_79322879	0.0120473	ACUGCAU	AK091375|MTX3|345778|metaxin 3	BX538064|MTX3|345778|metaxin 3	BC150295|MTX3|345778|metaxin 3	AK296864|MTX3|345778|metaxin 3	BX647596|MTX3|345778|metaxin 3	NM_001010891|MTX3|345778|metaxin 3	NM_001167741|MTX3|345778|metaxin 3
hg18_v1_chr15_-_60139857_60139955	0.0118635	ACUGCAU	AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)
hg18_v1_chr2_-_171999473_171999589	0.0117951	ACUGCAU	AK292108|METTL8|79828|methyltransferase like 8	NM_024770|METTL8|79828|methyltransferase like 8	AK297141|METTL8|79828|methyltransferase like 8
hg18_v1_chr9_-_114135754_114135834	0.0117694	ACUGCAU	NM_001163788|ROD1|9991|ROD1 regulator of differentiation 1 (S. pombe)	NM_001163790|ROD1|9991|ROD1 regulator of differentiation 1 (S. pombe)	NM_005156|ROD1|9991|ROD1 regulator of differentiation 1 (S. pombe)
hg18_v1_chr5_-_40834006_40834053	0.0117676	ACUGCAU	CR616720|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AF100763|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	BC012622|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK312947|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK307546|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	BC037303|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	AB022017|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	NM_006251|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	NM_206907|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg18_v1_chr8_-_33450172_33450205	0.0117602	ACUGCAU	AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
hg18_v1_chr11_-_73856241_73856247	0.0116796	ACUGCAU	CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3	DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3	NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3
hg18_v1_chr7_+_36395913_36396017	0.011588	ACUGCAU	BC070066|ANLN|54443|anillin, actin binding protein	NM_018685|ANLN|54443|anillin, actin binding protein	AK299803|ANLN|54443|anillin, actin binding protein	AK291254|ANLN|54443|anillin, actin binding protein	AF273437|ANLN|54443|anillin, actin binding protein
hg18_v1_chr1_-_154737130_154737155	0.011539	ACUGCAU	BC054520|MEF2D|4209|myocyte enhancer factor 2D	NM_005920|MEF2D|4209|myocyte enhancer factor 2D	AK308641|MEF2D|4209|myocyte enhancer factor 2D
hg18_v1_chr20_+_42537927_42537995	0.0115206	ACUGCAU	BC003071|TTPAL|79183|tocopherol (alpha) transfer protein-like	NM_001039199|TTPAL|79183|tocopherol (alpha) transfer protein-like	NM_024331|TTPAL|79183|tocopherol (alpha) transfer protein-like	AK314045|TTPAL|79183|tocopherol (alpha) transfer protein-like	CR936621|TTPAL|79183|tocopherol (alpha) transfer protein-like
hg18_v1_chr5_+_149090007_149090033	0.0114982	ACUGCAU	BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg18_v1_chr4_-_186584031_186584136	0.011465	ACUGCAU	AK002062|UFSP2|55325|UFM1-specific peptidase 2	CR622820|UFSP2|55325|UFM1-specific peptidase 2	CR610255|UFSP2|55325|UFM1-specific peptidase 2	CR604246|UFSP2|55325|UFM1-specific peptidase 2	CR613186|UFSP2|55325|UFM1-specific peptidase 2	CR622569|UFSP2|55325|UFM1-specific peptidase 2	AK091635|UFSP2|55325|UFM1-specific peptidase 2	NM_018359|UFSP2|55325|UFM1-specific peptidase 2
hg18_v1_chr7_+_29200636_29200660	0.0114183	ACUGCAU	NM_004067|CHN2|1124|chimerin (chimaerin) 2
hg18_v1_chr10_-_118022707_118022785	0.0112347	ACUGCAU	AK292886|GFRA1|2674|GDNF family receptor alpha 1	NM_001145453|GFRA1|2674|GDNF family receptor alpha 1
hg18_v1_chr1_+_210275541_210275733	0.0112253	ACUGCAU	NM_016448|DTL|51514|denticleless homolog (Drosophila)	AK292343|DTL|51514|denticleless homolog (Drosophila)	AK000742|DTL|51514|denticleless homolog (Drosophila)	AK303346|DTL|51514|denticleless homolog (Drosophila)
hg18_v1_chr13_+_49469138_49469225	0.0110973	ACUGCAU	NM_001007278|TRIM13|10206|tripartite motif containing 13	NM_005798|TRIM13|10206|tripartite motif containing 13	NM_052811|TRIM13|10206|tripartite motif containing 13	NM_213590|TRIM13|10206|tripartite motif containing 13	AY455758|TRIM13|10206|tripartite motif containing 13	AY764035|TRIM13|10206|tripartite motif containing 13	AK314496|TRIM13|10206|tripartite motif containing 13	AF241850|TRIM13|10206|tripartite motif containing 13	BC029514|TRIM13|10206|tripartite motif containing 13	CR612306|TRIM13|10206|tripartite motif containing 13	AY191002|TRIM13|10206|tripartite motif containing 13	BC003579|TRIM13|10206|tripartite motif containing 13	BC063407|TRIM13|10206|tripartite motif containing 13	AF220127|TRIM13|10206|tripartite motif containing 13	AL360196|TRIM13|10206|tripartite motif containing 13	CR603616|TRIM13|10206|tripartite motif containing 13	CR592295|TRIM13|10206|tripartite motif containing 13	CR593916|TRIM13|10206|tripartite motif containing 13
hg18_v1_chr8_+_90839109_90839225	0.0110788	ACUGCAU	NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2	CR596906|RIPK2|8767|receptor-interacting serine-threonine kinase 2	BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2	CR592019|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg18_v1_chr2_+_166137091_166137100	0.0110645	ACUGCAU	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr4_-_71924477_71924525	0.0109701	ACUGCAU	NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1	AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1
hg18_v1_chr6_-_166716449_166716551	0.0109241	ACUGCAU	AF125101|BRP44L|51660|brain protein 44-like	AF151887|BRP44L|51660|brain protein 44-like	NM_016098|BRP44L|51660|brain protein 44-like
hg18_v1_chr2_-_219141199_219141395	0.0105758	ACUGCAU	BC133007|USP37|57695|ubiquitin specific peptidase 37	BC133009|USP37|57695|ubiquitin specific peptidase 37	BC144249|USP37|57695|ubiquitin specific peptidase 37	BC144252|USP37|57695|ubiquitin specific peptidase 37	AK095577|USP37|57695|ubiquitin specific peptidase 37	AK128583|USP37|57695|ubiquitin specific peptidase 37	BX538024|USP37|57695|ubiquitin specific peptidase 37	BC050461|USP37|57695|ubiquitin specific peptidase 37	BC112901|USP37|57695|ubiquitin specific peptidase 37	AL832645|USP37|57695|ubiquitin specific peptidase 37	NM_020935|USP37|57695|ubiquitin specific peptidase 37
hg18_v1_chr9_+_78246401_78246401	0.0105556	ACUGCAU	AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2
hg18_v1_chr1_-_29381223_29381229	0.0105289	ACUGCAU	NM_005626|SRSF4|6429|serine/arginine-rich splicing factor 4
hg18_v1_chr9_+_109085337_109085370	0.0105239	ACUGCAU	AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg18_v1_chr18_+_13716658_13716723	0.0104541	ACUGCAU	AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase	BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase	BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase	AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase	BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase	AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase	AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase	AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase	NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase	AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase	BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase
hg18_v1_chr4_+_82171142_82171191	0.0104077	ACUGCAU	M22491|BMP3|651|bone morphogenetic protein 3	NM_001201|BMP3|651|bone morphogenetic protein 3	BC096269|BMP3|651|bone morphogenetic protein 3	BC096270|BMP3|651|bone morphogenetic protein 3	BC096271|BMP3|651|bone morphogenetic protein 3	BC117514|BMP3|651|bone morphogenetic protein 3
hg18_v1_chr1_-_34404029_34404029	0.0103417	ACUGCAU	AY210418|CSMD2|114784|CUB and Sushi multiple domains 2	NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2
hg18_v1_chr1_-_158759606_158759700	0.0101527	ACUGCAU	AJ306388|SLAMF6|114836|SLAM family member 6	AJ277141|SLAMF6|114836|SLAM family member 6	AK313549|SLAMF6|114836|SLAM family member 6	BC113893|SLAMF6|114836|SLAM family member 6	BC114495|SLAMF6|114836|SLAM family member 6	AK310085|SLAMF6|114836|SLAM family member 6	AL832854|SLAMF6|114836|SLAM family member 6	BC090928|SLAMF6|114836|SLAM family member 6	AK300013|SLAMF6|114836|SLAM family member 6	AK301026|SLAMF6|114836|SLAM family member 6	AY358159|SLAMF6|114836|SLAM family member 6	AK303990|SLAMF6|114836|SLAM family member 6	AK125624|SLAMF6|114836|SLAM family member 6	NM_001184714|SLAMF6|114836|SLAM family member 6	NM_001184715|SLAMF6|114836|SLAM family member 6	NM_001184716|SLAMF6|114836|SLAM family member 6	NM_052931|SLAMF6|114836|SLAM family member 6
hg18_v1_chr9_+_115023628_115023683	0.00991153	ACUGCAU	CR605076|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	NM_001859|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	CR593760|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	U83460|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	AK292511|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1
hg18_v1_chr16_-_11918019_11918019	0.00986731	ACUGCAU	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg18_v1_chr12_-_69317441_69317486	0.00976411	ACUGCAU	AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr20_+_61039803_61039999	0.00960655	ACUGCAU	NM_017896|C20orf11|54994|chromosome 20 open reading frame 11	BC032120|C20orf11|54994|chromosome 20 open reading frame 11	AK299509|C20orf11|54994|chromosome 20 open reading frame 11	AK000609|C20orf11|54994|chromosome 20 open reading frame 11
hg18_v1_chr8_-_91727074_91727308	0.00953559	ACUGCAU	AY147881|TMEM64|169200|transmembrane protein 64	NM_001008495|TMEM64|169200|transmembrane protein 64	NM_001146273|TMEM64|169200|transmembrane protein 64
hg18_v1_chrX_-_133758812_133758927	0.00945198	ACUGCAU	BC019221|FAM122B|159090|family with sequence similarity 122B	NM_001166599|FAM122B|159090|family with sequence similarity 122B	AK124650|FAM122B|159090|family with sequence similarity 122B	AK297720|FAM122B|159090|family with sequence similarity 122B	NM_001166600|FAM122B|159090|family with sequence similarity 122B	NM_001170757|FAM122B|159090|family with sequence similarity 122B
hg18_v1_chr20_+_61996954_61996982	0.00938177	ACUGCAU	CR595822|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5	BC053642|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5	NM_025219|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5
hg18_v1_chr2_+_109729176_109729293	0.0093488	ACUGCAU	BC036652|ANKRD57|65124|ankyrin repeat domain 57	BC066772|ANKRD57|65124|ankyrin repeat domain 57	NM_023016|ANKRD57|65124|ankyrin repeat domain 57	AK025523|ANKRD57|65124|ankyrin repeat domain 57	CR622761|ANKRD57|65124|ankyrin repeat domain 57
hg18_v1_chr3_+_183993978_183993984	0.00920959	ACUGCAU	BC042180|ATP11B|23200|ATPase, class VI, type 11B	NM_014616|ATP11B|23200|ATPase, class VI, type 11B
hg18_v1_chr1_+_65386359_65386514	0.00913422	ACUGCAU	NM_013410|AK4|205|adenylate kinase 4	AK025926|AK4|205|adenylate kinase 4	AK313611|AK4|205|adenylate kinase 4	X60673|AK4|205|adenylate kinase 4
hg18_v1_chr2_+_169021039_169021204	0.00911581	ACUGCAU	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr1_+_70443919_70443959	0.00901553	ACUGCAU	BC022815|SRSF11|9295|serine/arginine-rich splicing factor 11	NM_001190987|SRSF11|9295|serine/arginine-rich splicing factor 11	NM_004768|SRSF11|9295|serine/arginine-rich splicing factor 11
hg18_v1_chr4_+_2790338_2790338	0.00877422	ACUGCAU	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg18_v1_chr2_+_65069986_65070004	0.00875143	ACUGCAU	AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg18_v1_chr1_-_7923464_7923473	0.0087106	ACUGCAU	U03397|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	BC006196|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	L12964|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg18_v1_chr7_+_91713347_91713743	0.00866431	ACUGCAU	AB037807|ANKIB1|54467|ankyrin repeat and IBR domain containing 1	NM_019004|ANKIB1|54467|ankyrin repeat and IBR domain containing 1	BC063861|ANKIB1|54467|ankyrin repeat and IBR domain containing 1
hg18_v1_chrX_-_53367246_53367302	0.00864667	ACUGCAU	AB011094|IQSEC2|23096|IQ motif and Sec7 domain 2	NM_001111125|IQSEC2|23096|IQ motif and Sec7 domain 2
hg18_v1_chr12_-_368689_369037	0.00863078	ACUGCAU	AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A	AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A	AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A	BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A	BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A	NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A	BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A
hg18_v1_chr14_-_87529600_87529659	0.00861134	ACUGCAU	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr13_+_48923688_48923775	0.00859643	ACUGCAU	BC047434|SETDB2|83852|SET domain, bifurcated 2	NM_001160308|SETDB2|83852|SET domain, bifurcated 2	AK307593|SETDB2|83852|SET domain, bifurcated 2
hg18_v1_chr18_-_64533319_64533514	0.0085603	ACUGCAU	AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3	BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3	NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3	BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3	AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3
hg18_v1_chr9_+_19398924_19399082	0.00854656	ACUGCAU	AK123581|ACER2|340485|alkaline ceramidase 2	NM_001010887|ACER2|340485|alkaline ceramidase 2	BC092487|ACER2|340485|alkaline ceramidase 2	AY312516|ACER2|340485|alkaline ceramidase 2
hg18_v1_chr1_-_46906626_46906874	0.00853413	ACUGCAU	NM_001042546|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1	NM_022745|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1
hg18_v1_chr17_+_24742068_24742074	0.00852713	ACUGCAU	NM_020791|TAOK1|57551|TAO kinase 1	BC133039|TAOK1|57551|TAO kinase 1	BC144067|TAOK1|57551|TAO kinase 1
hg18_v1_chr18_-_59137488_59137592	0.00851553	ACUGCAU	BC027258|BCL2|596|B-cell CLL/lymphoma 2	NM_000633|BCL2|596|B-cell CLL/lymphoma 2	NM_000657|BCL2|596|B-cell CLL/lymphoma 2
hg18_v1_chr2_+_5750229_5750303	0.00846849	ACUGCAU	U23752|SOX11|6664|SRY (sex determining region Y)-box 11	AB028641|SOX11|6664|SRY (sex determining region Y)-box 11	NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11	BC025789|SOX11|6664|SRY (sex determining region Y)-box 11
hg18_v1_chr4_-_71924052_71924083	0.00832709	ACUGCAU	AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1	NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1
hg18_v1_chr6_-_119079712_119079746	0.00824615	ACUGCAU	BC048977|C6orf204|387119|chromosome 6 open reading frame 204	BC052778|C6orf204|387119|chromosome 6 open reading frame 204	NM_001042475|C6orf204|387119|chromosome 6 open reading frame 204	NM_206921|C6orf204|387119|chromosome 6 open reading frame 204	BC036553|C6orf204|387119|chromosome 6 open reading frame 204
hg18_v1_chr2_+_10009242_10009361	0.00806789	ACUGCAU	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg18_v1_chr10_+_98582005_98582082	0.00781054	ACUGCAU	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr17_+_57909979_57910676	0.00776191	ACUGCAU	NM_001112707|TLK2|11011|tousled-like kinase 2	NM_006852|TLK2|11011|tousled-like kinase 2	BC044925|TLK2|11011|tousled-like kinase 2	AF162667|TLK2|11011|tousled-like kinase 2
hg18_v1_chr2_-_166940710_166940742	0.00772651	ACUGCAU	AK307549|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit	NM_002977|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit
hg18_v1_chr13_+_38159172_38159172	0.00771079	ACUGCAU	NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2
hg18_v1_chr3_-_121550767_121550895	0.00760393	ACUGCAU	AM393236|LRRC58|116064|leucine rich repeat containing 58	BC013757|LRRC58|116064|leucine rich repeat containing 58	NM_001099678|LRRC58|116064|leucine rich repeat containing 58
hg18_v1_chr14_+_88130482_88130531	0.00760107	ACUGCAU	NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14	BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14	AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14
hg18_v1_chr9_+_139633264_139633264	0.00756872	ACUGCAU	BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1	NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1	NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1
hg18_v1_chr6_-_79844658_79844894	0.00755865	ACUGCAU	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chrX_-_37591760_37591832	0.00746334	ACUGCAU	BC000968|DYNLT3|6990|dynein, light chain, Tctex-type 3	AK311851|DYNLT3|6990|dynein, light chain, Tctex-type 3	CR591625|DYNLT3|6990|dynein, light chain, Tctex-type 3	U02556|DYNLT3|6990|dynein, light chain, Tctex-type 3	NM_006520|DYNLT3|6990|dynein, light chain, Tctex-type 3
hg18_v1_chr1_+_149851138_149851286	0.00746254	ACUGCAU	BC012184|SNX27|81609|sorting nexin family member 27	BC101822|SNX27|81609|sorting nexin family member 27	BC101824|SNX27|81609|sorting nexin family member 27	BC100998|SNX27|81609|sorting nexin family member 27	BC101000|SNX27|81609|sorting nexin family member 27	NM_030918|SNX27|81609|sorting nexin family member 27
hg18_v1_chr2_+_32142083_32142326	0.00730802	ACUGCAU	AB029006|SPAST|6683|spastin	BC150260|SPAST|6683|spastin	NM_014946|SPAST|6683|spastin	NM_199436|SPAST|6683|spastin	AJ246001|SPAST|6683|spastin
hg18_v1_chr16_+_6763810_6763810	0.00730012	ACUGCAU	AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg18_v1_chr16_+_68156497_68156497	0.00729931	ACUGCAU	AF346509|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_001113178|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_006599|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_138713|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_138714|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_173214|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr10_-_91393610_91393627	0.00727741	ACUGCAU	AF355198|PANK1|53354|pantothenate kinase 1	NM_138316|PANK1|53354|pantothenate kinase 1	NM_148978|PANK1|53354|pantothenate kinase 1	AY027662|PANK1|53354|pantothenate kinase 1	AY027663|PANK1|53354|pantothenate kinase 1
hg18_v1_chr1_-_51757582_51757642	0.00722607	ACUGCAU	NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15	Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr12_+_73217817_73217887	0.00719425	ACUGCAU	NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B	AK056642|ATXN7L3B|552889|ataxin 7-like 3B
hg18_v1_chr17_-_27693246_27693394	0.00701194	ACUGCAU	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	CR618435|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	CR599009|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg18_v1_chr20_+_18070867_18070963	0.00698135	ACUGCAU	NM_020536|CSRP2BP|57325|CSRP2 binding protein	BC007537|CSRP2BP|57325|CSRP2 binding protein
hg18_v1_chr13_+_107668714_107668889	0.00697877	ACUGCAU	NM_032859|ABHD13|84945|abhydrolase domain containing 13	AK075195|ABHD13|84945|abhydrolase domain containing 13	BC022566|ABHD13|84945|abhydrolase domain containing 13
hg18_v1_chr1_-_239869826_239870370	0.00692602	ACUGCAU	BC051900|OPN3|23596|opsin 3	AF140242|OPN3|23596|opsin 3	BC073872|OPN3|23596|opsin 3	BC062622|OPN3|23596|opsin 3	AF303588|OPN3|23596|opsin 3	BC036773|OPN3|23596|opsin 3	CR600728|OPN3|23596|opsin 3	NM_014322|OPN3|23596|opsin 3
hg18_v1_chr6_+_7486862_7486873	0.00688995	ACUGCAU	HM151899|DSP|1832|desmoplakin	M77830|DSP|1832|desmoplakin	NM_001008844|DSP|1832|desmoplakin	NM_004415|DSP|1832|desmoplakin	BC140802|DSP|1832|desmoplakin	BC144587|DSP|1832|desmoplakin
hg18_v1_chr6_-_7258351_7258539	0.0067579	ACUGCAU	BT007387|SSR1|6745|signal sequence receptor, alpha	CR456961|SSR1|6745|signal sequence receptor, alpha	DQ892751|SSR1|6745|signal sequence receptor, alpha	EU176743|SSR1|6745|signal sequence receptor, alpha	CR610481|SSR1|6745|signal sequence receptor, alpha	Z12830|SSR1|6745|signal sequence receptor, alpha	CR599599|SSR1|6745|signal sequence receptor, alpha	AK075562|SSR1|6745|signal sequence receptor, alpha	AK222762|SSR1|6745|signal sequence receptor, alpha	AK222809|SSR1|6745|signal sequence receptor, alpha	AK291550|SSR1|6745|signal sequence receptor, alpha	CR591675|SSR1|6745|signal sequence receptor, alpha	AK312653|SSR1|6745|signal sequence receptor, alpha	CR936719|SSR1|6745|signal sequence receptor, alpha	BC007710|SSR1|6745|signal sequence receptor, alpha	NM_003144|SSR1|6745|signal sequence receptor, alpha
hg18_v1_chr8_-_120033240_120033563	0.00667503	ACUGCAU	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg18_v1_chr1_+_229365296_229365338	0.00663422	ACUGCAU	AK126782|TRIM67|440730|tripartite motif containing 67	NM_001004342|TRIM67|440730|tripartite motif containing 67	AY253917|TRIM67|440730|tripartite motif containing 67
hg18_v1_chr2_+_203811408_203811408	0.0065817	ACUGCAU	NM_177538|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1
hg18_v1_chr1_-_109742020_109742162	0.00656324	ACUGCAU	DQ896793|SORT1|6272|sortilin 1	AK293118|SORT1|6272|sortilin 1	BC023542|SORT1|6272|sortilin 1	NM_002959|SORT1|6272|sortilin 1
hg18_v1_chr1_-_210070736_210070771	0.00652774	ACUGCAU	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr16_+_67131161_67131161	0.00651285	ACUGCAU	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr2_+_86800898_86800933	0.00646475	ACUGCAU	NM_022780|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr11_+_124967946_124967951	0.00633193	ACUGCAU	L47337|STT3A|3703|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	NM_152713|STT3A|3703|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	AK290040|STT3A|3703|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	AK290657|STT3A|3703|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)	L38961|STT3A|3703|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
hg18_v1_chr5_+_134209268_134209268	0.0063307	ACUGCAU	BC053677|C5orf24|134553|chromosome 5 open reading frame 24	NM_152409|C5orf24|134553|chromosome 5 open reading frame 24
hg18_v1_chr13_-_29322795_29322888	0.00632755	ACUGCAU	NM_007106|UBL3|5412|ubiquitin-like 3
hg18_v1_chr4_-_78959532_78959605	0.00628448	ACUGCAU	AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like	AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like	AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like	NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like
hg18_v1_chr5_+_36912595_36912648	0.00624114	ACUGCAU	NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)	NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chrX_-_109925648_109925731	0.00620783	ACUGCAU	BC002909|CHRDL1|91851|chordin-like 1	AK293106|CHRDL1|91851|chordin-like 1	CR604833|CHRDL1|91851|chordin-like 1	AK297563|CHRDL1|91851|chordin-like 1	AK312270|CHRDL1|91851|chordin-like 1	NM_145234|CHRDL1|91851|chordin-like 1
hg18_v1_chr9_-_122595475_122595560	0.00614264	ACUGCAU	BC000239|FBXW2|26190|F-box and WD repeat domain containing 2	BC018738|FBXW2|26190|F-box and WD repeat domain containing 2	AK300066|FBXW2|26190|F-box and WD repeat domain containing 2	AK314385|FBXW2|26190|F-box and WD repeat domain containing 2	AK022484|FBXW2|26190|F-box and WD repeat domain containing 2	NM_012164|FBXW2|26190|F-box and WD repeat domain containing 2
hg18_v1_chr9_+_131855805_131855805	0.0059411	ACUGCAU	BC039728|GPR107|57720|G protein-coupled receptor 107	NM_001136557|GPR107|57720|G protein-coupled receptor 107	NM_001136558|GPR107|57720|G protein-coupled receptor 107	NM_020960|GPR107|57720|G protein-coupled receptor 107
hg18_v1_chr1_-_145110669_145110763	0.00587849	ACUGCAU	AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit
hg18_v1_chr12_+_61146798_61146895	0.00587234	ACUGCAU	NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)	BX537415|MON2|23041|MON2 homolog (S. cerevisiae)	AL833066|MON2|23041|MON2 homolog (S. cerevisiae)	AK123842|MON2|23041|MON2 homolog (S. cerevisiae)	BC065289|MON2|23041|MON2 homolog (S. cerevisiae)	BC136621|MON2|23041|MON2 homolog (S. cerevisiae)	BC144309|MON2|23041|MON2 homolog (S. cerevisiae)	BC144324|MON2|23041|MON2 homolog (S. cerevisiae)	AB028963|MON2|23041|MON2 homolog (S. cerevisiae)	BC141817|MON2|23041|MON2 homolog (S. cerevisiae)	BC142710|MON2|23041|MON2 homolog (S. cerevisiae)	BC151241|MON2|23041|MON2 homolog (S. cerevisiae)
hg18_v1_chr12_-_122400937_122400940	0.00571354	ACUGCAU	AY364255|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	AB014772|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	BC129949|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	BC133704|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	NM_001167856|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	NM_018183|SBNO1|55206|strawberry notch homolog 1 (Drosophila)
hg18_v1_chr12_-_91847219_91847240	0.00561697	ACUGCAU	NM_003566|EEA1|8411|early endosome antigen 1
hg18_v1_chr1_-_53566171_53566330	0.00560504	ACUGCAU	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr8_-_82761072_82761143	0.00552278	ACUGCAU	AK300750|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	AK312823|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	AK297078|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	BC008381|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	BC009565|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	AF042729|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	CR606000|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	NM_001144878|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	NM_001144879|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1	NM_005536|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1
hg18_v1_chrX_-_53466335_53466404	0.00550708	ACUGCAU	BC080185|SMC1A|8243|structural maintenance of chromosomes 1A	BC112127|SMC1A|8243|structural maintenance of chromosomes 1A	BC171726|SMC1A|8243|structural maintenance of chromosomes 1A	NM_006306|SMC1A|8243|structural maintenance of chromosomes 1A	AK291921|SMC1A|8243|structural maintenance of chromosomes 1A
hg18_v1_chr15_+_63609791_63609893	0.00548782	ACUGCAU	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr5_-_60493985_60494063	0.00543776	ACUGCAU	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	CR599620|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr1_-_153098811_153098961	0.00543362	ACUGCAU	CR595038|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr7_+_28418668_28418668	0.00538794	ACUGCAU	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr14_+_88099005_88099121	0.00534172	ACUGCAU	NM_001160103|ZC3H14|79882|zinc finger CCCH-type containing 14	NM_001160104|ZC3H14|79882|zinc finger CCCH-type containing 14	NM_024824|ZC3H14|79882|zinc finger CCCH-type containing 14	NM_207660|ZC3H14|79882|zinc finger CCCH-type containing 14	AY578061|ZC3H14|79882|zinc finger CCCH-type containing 14	AK302136|ZC3H14|79882|zinc finger CCCH-type containing 14	AK303123|ZC3H14|79882|zinc finger CCCH-type containing 14	AY578060|ZC3H14|79882|zinc finger CCCH-type containing 14
hg18_v1_chr3_-_133923906_133923965	0.00532808	ACUGCAU	AY257864|NPHP3|27031|nephronophthisis 3 (adolescent)	BC131729|NPHP3|27031|nephronophthisis 3 (adolescent)	BC068082|NPHP3|27031|nephronophthisis 3 (adolescent)	AK055893|NPHP3|27031|nephronophthisis 3 (adolescent)	NM_153240|NPHP3|27031|nephronophthisis 3 (adolescent)
hg18_v1_chr4_-_166253453_166253497	0.00526962	ACUGCAU	CR590819|TMEM192|201931|transmembrane protein 192	NM_001100389|TMEM192|201931|transmembrane protein 192
hg18_v1_chr7_+_21434097_21434591	0.00520898	ACUGCAU	AK289728|SP4|6671|Sp4 transcription factor	AK296749|SP4|6671|Sp4 transcription factor	NM_003112|SP4|6671|Sp4 transcription factor	X68561|SP4|6671|Sp4 transcription factor	BC109300|SP4|6671|Sp4 transcription factor	BC109301|SP4|6671|Sp4 transcription factor
hg18_v1_chr17_-_39936453_39936543	0.00519535	ACUGCAU	NM_001002909|GPATCH8|23131|G patch domain containing 8
hg18_v1_chr11_+_8016755_8016755	0.00514572	ACUGCAU	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg18_v1_chr5_+_179058402_179058539	0.00511436	ACUGCAU	NM_001024649|CANX|821|calnexin	NM_001746|CANX|821|calnexin
hg18_v1_chr1_+_222368413_222368660	0.00508883	ACUGCAU	NM_001136115|FBXO28|23219|F-box protein 28	NM_015176|FBXO28|23219|F-box protein 28	AK001628|FBXO28|23219|F-box protein 28	AK307892|FBXO28|23219|F-box protein 28	CR607611|FBXO28|23219|F-box protein 28	BC031576|FBXO28|23219|F-box protein 28	AK303381|FBXO28|23219|F-box protein 28	CR607640|FBXO28|23219|F-box protein 28	AB007952|FBXO28|23219|F-box protein 28
hg18_v1_chr19_+_42099073_42099288	0.00504467	ACUGCAU	BC016334|ZNF568|374900|zinc finger protein 568	NM_198539|ZNF568|374900|zinc finger protein 568	BC031218|ZNF568|374900|zinc finger protein 568	BX640681|ZNF568|374900|zinc finger protein 568	BC108696|ZNF568|374900|zinc finger protein 568	AK299626|ZNF568|374900|zinc finger protein 568	AK093123|ZNF568|374900|zinc finger protein 568	BC131547|ZNF568|374900|zinc finger protein 568	BC111777|ZNF568|374900|zinc finger protein 568
hg18_v1_chr22_-_37232290_37232503	0.00492916	ACUGCAU	NM_001098504|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	NM_006386|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
hg18_v1_chr8_+_99199243_99199243	0.00491012	ACUGCAU	BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)	NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
hg18_v1_chr6_-_166502119_166502120	0.00483013	ACUGCAU	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg18_v1_chr8_-_74821636_74821789	0.0047343	ACUGCAU	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chrX_+_9943793_9943794	0.00447769	ACUGCAU	BC098455|WWC3|55841|WWC family member 3	NM_015691|WWC3|55841|WWC family member 3
hg18_v1_chr15_-_53350383_53350398	0.00438268	ACUGCAU	BC132800|RAB27A|5873|RAB27A, member RAS oncogene family	BC136423|RAB27A|5873|RAB27A, member RAS oncogene family	BC107680|RAB27A|5873|RAB27A, member RAS oncogene family	NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family
hg18_v1_chrX_+_49573952_49574021	0.0042944	ACUGCAU	AK092049|CLCN5|1184|chloride channel 5	NM_001127898|CLCN5|1184|chloride channel 5	NM_001127899|CLCN5|1184|chloride channel 5	AK056560|CLCN5|1184|chloride channel 5
hg18_v1_chr12_-_48387459_48387499	0.00421772	ACUGCAU	AB095934|FMNL3|91010|formin-like 3	BC159100|FMNL3|91010|formin-like 3	NM_175736|FMNL3|91010|formin-like 3	NM_198900|FMNL3|91010|formin-like 3
hg18_v1_chr2_-_178461710_178461711	0.00414833	ACUGCAU	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chr11_+_93157042_93157101	0.0041458	ACUGCAU	NM_004268|MED17|9440|mediator complex subunit 17	AK001674|MED17|9440|mediator complex subunit 17	AK022156|MED17|9440|mediator complex subunit 17	AK299702|MED17|9440|mediator complex subunit 17
hg18_v1_chr2_-_222871577_222871962	0.00412906	ACUGCAU	EU446645|PAX3|5077|paired box 3	AY251279|PAX3|5077|paired box 3	AY251280|PAX3|5077|paired box 3	S69369|PAX3|5077|paired box 3	S69370|PAX3|5077|paired box 3	BC063547|PAX3|5077|paired box 3	BC101299|PAX3|5077|paired box 3	BC101300|PAX3|5077|paired box 3	BC101301|PAX3|5077|paired box 3	BC101302|PAX3|5077|paired box 3	BC114363|PAX3|5077|paired box 3	AK291278|PAX3|5077|paired box 3	NM_000438|PAX3|5077|paired box 3	NM_001127366|PAX3|5077|paired box 3	NM_013942|PAX3|5077|paired box 3	NM_181457|PAX3|5077|paired box 3	NM_181458|PAX3|5077|paired box 3	NM_181459|PAX3|5077|paired box 3	NM_181460|PAX3|5077|paired box 3	NM_181461|PAX3|5077|paired box 3
hg18_v1_chr10_-_27483315_27483337	0.00408051	ACUGCAU	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr5_+_134209444_134209606	0.00404497	ACUGCAU	NM_001135586|C5orf24|134553|chromosome 5 open reading frame 24	AK094881|C5orf24|134553|chromosome 5 open reading frame 24
hg18_v1_chr17_-_62671767_62671782	0.00404065	ACUGCAU	NM_014877|HELZ|9931|helicase with zinc finger
hg18_v1_chr3_+_131761867_131761867	0.00396343	ACUGCAU	AM774225|COL6A6|131873|collagen, type VI, alpha 6	NM_001102608|COL6A6|131873|collagen, type VI, alpha 6
hg18_v1_chr14_-_94669547_94669592	0.00395412	ACUGCAU	HM595745|DICER1|23405|dicer 1, ribonuclease type III	NM_001195573|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr8_+_17440664_17440771	0.00388349	ACUGCAU	NM_001164771|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	NM_003046|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC069648|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC104905|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC113661|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	BC143583|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg18_v1_chr1_-_100487976_100487998	0.00385745	ACUGCAU	AK303941|DBT|1629|dihydrolipoamide branched chain transacylase E2	AK313191|DBT|1629|dihydrolipoamide branched chain transacylase E2	X66785|DBT|1629|dihydrolipoamide branched chain transacylase E2	NM_001918|DBT|1629|dihydrolipoamide branched chain transacylase E2
hg18_v1_chrX_-_131401319_131401398	0.00384393	ACUGCAU	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr7_+_28692122_28692294	0.00382031	ACUGCAU	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr17_-_23996294_23996299	0.00380009	ACUGCAU	BC050440|KIAA0100|9703|KIAA0100	NM_014680|KIAA0100|9703|KIAA0100
hg18_v1_chr16_+_13921490_13921575	0.00379897	ACUGCAU	BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4	NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4	AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4	U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4	BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4	AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4
hg18_v1_chr11_-_102468113_102468153	0.00374022	ACUGCAU	AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
hg18_v1_chr1_-_233358829_233358880	0.00360627	ACUGCAU	AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)
hg18_v1_chr14_-_81069951_81070010	0.00353842	ACUGCAU	NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)
hg18_v1_chr22_-_37382525_37382579	0.00344506	ACUGCAU	NM_001013647|LOC646851|646851|hypothetical LOC646851
hg18_v1_chr2_+_32244406_32244461	0.00337313	ACUGCAU	NM_001193513|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_001193514|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_001193515|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_017964|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK055663|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK096672|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK127716|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK304225|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	BC066903|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	EF560719|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	EF560726|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AL832755|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AF173387|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6
hg18_v1_chr11_-_73787065_73787212	0.00333726	ACUGCAU	AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1	AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1	BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1	NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1	CR606675|PGM2L1|283209|phosphoglucomutase 2-like 1
hg18_v1_chr6_-_106880300_106880413	0.0033229	ACUGCAU	CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	CR596348|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)
hg18_v1_chr2_+_69974581_69974629	0.0032857	ACUGCAU	BC017890|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	NM_006857|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	CR591484|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	X76302|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	AK291128|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	CR600623|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	CR609338|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	CR623125|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	AK312041|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
hg18_v1_chr22_-_39582616_39582657	0.00308169	ACUGCAU	NM_003932|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
hg18_v1_chr2_+_69995656_69995739	0.00300297	ACUGCAU	BC098396|MXD1|4084|MAX dimerization protein 1	NM_002357|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr3_-_143350898_143351131	0.00299451	ACUGCAU	AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	CR597951|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr8_+_42871176_42871243	0.00291109	ACUGCAU	BC048304|HOOK3|84376|hook homolog 3 (Drosophila)	NM_032410|HOOK3|84376|hook homolog 3 (Drosophila)
hg18_v1_chr3_-_15115656_15115659	0.00281777	ACUGCAU	AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20	AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20	AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20	NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20
hg18_v1_chr18_-_50004996_50005155	0.00279843	ACUGCAU	AF072242|MBD2|8932|methyl-CpG binding domain protein 2	NM_003927|MBD2|8932|methyl-CpG binding domain protein 2	NM_015832|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr22_-_20551953_20551988	0.00271923	ACUGCAU	BC017832|MAPK1|5594|mitogen-activated protein kinase 1	NM_002745|MAPK1|5594|mitogen-activated protein kinase 1	NM_138957|MAPK1|5594|mitogen-activated protein kinase 1
hg18_v1_chr1_+_165957780_165958124	0.00271361	ACUGCAU	NM_001146191|MPZL1|9019|myelin protein zero-like 1	NM_003953|MPZL1|9019|myelin protein zero-like 1	NM_024569|MPZL1|9019|myelin protein zero-like 1	AK297112|MPZL1|9019|myelin protein zero-like 1	AK075334|MPZL1|9019|myelin protein zero-like 1	AK307250|MPZL1|9019|myelin protein zero-like 1	AK291249|MPZL1|9019|myelin protein zero-like 1	AY359019|MPZL1|9019|myelin protein zero-like 1	AF181660|MPZL1|9019|myelin protein zero-like 1	AF478447|MPZL1|9019|myelin protein zero-like 1	BC000984|MPZL1|9019|myelin protein zero-like 1	CR604001|MPZL1|9019|myelin protein zero-like 1	BC007881|MPZL1|9019|myelin protein zero-like 1	AF095727|MPZL1|9019|myelin protein zero-like 1	AF087020|MPZL1|9019|myelin protein zero-like 1	AF092425|MPZL1|9019|myelin protein zero-like 1	AF095726|MPZL1|9019|myelin protein zero-like 1	AK315546|MPZL1|9019|myelin protein zero-like 1	AF239756|MPZL1|9019|myelin protein zero-like 1	BT019542|MPZL1|9019|myelin protein zero-like 1	CR542160|MPZL1|9019|myelin protein zero-like 1
hg18_v1_chr14_-_19999475_19999610	0.00266006	ACUGCAU	BC020947|TMEM55B|90809|transmembrane protein 55B	BX161490|TMEM55B|90809|transmembrane protein 55B	NM_001100814|TMEM55B|90809|transmembrane protein 55B	NM_144568|TMEM55B|90809|transmembrane protein 55B	AK314021|TMEM55B|90809|transmembrane protein 55B
hg18_v1_chr3_+_180853473_180853705	0.00265565	ACUGCAU	CR623689|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)	DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)
hg18_v1_chr9_+_133295297_133295309	0.00260393	ACUGCAU	NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B
hg18_v1_chr8_+_38704860_38704860	0.00258476	ACUGCAU	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr16_+_27346079_27346131	0.0025705	ACUGCAU	NM_021798|IL21R|50615|interleukin 21 receptor	AY358826|IL21R|50615|interleukin 21 receptor	AF254067|IL21R|50615|interleukin 21 receptor
hg18_v1_chr9_-_99994704_99994804	0.00256896	ACUGCAU	AK292788|CORO2A|7464|coronin, actin binding protein, 2A	BC011690|CORO2A|7464|coronin, actin binding protein, 2A	AB209809|CORO2A|7464|coronin, actin binding protein, 2A	NM_052820|CORO2A|7464|coronin, actin binding protein, 2A
hg18_v1_chr4_-_139382672_139382956	0.00249863	ACUGCAU	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr14_+_31868229_31868346	0.0024333	ACUGCAU	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg18_v1_chr2_+_39746525_39746618	0.00239028	ACUGCAU	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	CR597741|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg18_v1_chr7_-_92301147_92301166	0.00231256	ACUGCAU	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr7_-_148212336_148212382	0.00229958	ACUGCAU	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr11_-_16387001_16387005	0.00222264	ACUGCAU	BC037866|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr22_+_27498628_27498661	0.00220188	ACUGCAU	AK289516|CCDC117|150275|coiled-coil domain containing 117	NM_173510|CCDC117|150275|coiled-coil domain containing 117
hg18_v1_chr2_-_29150630_29150630	0.00217812	ACUGCAU	NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71
hg18_v1_chrX_-_131375217_131375316	0.00217704	ACUGCAU	AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr1_-_152741148_152741149	0.00207619	ACUGCAU	BC143765|SHE|126669|Src homology 2 domain containing E	BC117210|SHE|126669|Src homology 2 domain containing E	NM_001010846|SHE|126669|Src homology 2 domain containing E
hg18_v1_chr20_+_3775421_3775572	0.00205275	ACUGCAU	NM_020746|MAVS|57506|mitochondrial antiviral signaling protein	AK296897|MAVS|57506|mitochondrial antiviral signaling protein	AB097003|MAVS|57506|mitochondrial antiviral signaling protein	AK123956|MAVS|57506|mitochondrial antiviral signaling protein	AK291785|MAVS|57506|mitochondrial antiviral signaling protein	BX649084|MAVS|57506|mitochondrial antiviral signaling protein	AK023799|MAVS|57506|mitochondrial antiviral signaling protein	BC044952|MAVS|57506|mitochondrial antiviral signaling protein	CR613265|MAVS|57506|mitochondrial antiviral signaling protein	AK130992|MAVS|57506|mitochondrial antiviral signaling protein
hg18_v1_chr1_+_11788793_11788819	0.00203573	ACUGCAU	NM_001286|CLCN6|1185|chloride channel 6	NM_021735|CLCN6|1185|chloride channel 6	NM_021736|CLCN6|1185|chloride channel 6	NM_021737|CLCN6|1185|chloride channel 6
hg18_v1_chr17_+_55325224_55325265	0.00198376	ACUGCAU	NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg18_v1_chr8_+_99198664_99198764	0.00195975	ACUGCAU	NM_001145860|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)	NM_001145861|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)	X99302|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)	AK291434|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
hg18_v1_chr1_-_53566331_53566408	0.00186779	ACUGCAU	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr6_-_111243100_111243122	0.0017329	ACUGCAU	BC037289|CDK19|23097|cyclin-dependent kinase 19	NM_015076|CDK19|23097|cyclin-dependent kinase 19	AK292360|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr5_+_77692094_77692251	0.00162871	ACUGCAU	NM_004866|SCAMP1|9522|secretory carrier membrane protein 1	CR624486|SCAMP1|9522|secretory carrier membrane protein 1	AF038966|SCAMP1|9522|secretory carrier membrane protein 1	AK304452|SCAMP1|9522|secretory carrier membrane protein 1	AK225172|SCAMP1|9522|secretory carrier membrane protein 1	BC009787|SCAMP1|9522|secretory carrier membrane protein 1	BC015065|SCAMP1|9522|secretory carrier membrane protein 1	AK298146|SCAMP1|9522|secretory carrier membrane protein 1	BC034048|SCAMP1|9522|secretory carrier membrane protein 1	AK290225|SCAMP1|9522|secretory carrier membrane protein 1	CR542286|SCAMP1|9522|secretory carrier membrane protein 1
hg18_v1_chr2_+_191453791_191453791	0.00146092	ACUGCAU	AK289747|GLS|2744|glutaminase	NM_014905|GLS|2744|glutaminase
hg18_v1_chr6_+_4835224_4835224	0.00144482	ACUGCAU	BC043397|CDYL|9425|chromodomain protein, Y-like	NM_001143971|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr7_-_32496497_32496547	0.00141499	ACUGCAU	CR607727|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	CR600225|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg18_v1_chr19_-_18493886_18493969	0.00139866	ACUGCAU	BC049195|ELL|8178|elongation factor RNA polymerase II	NM_006532|ELL|8178|elongation factor RNA polymerase II
hg18_v1_chrX_-_123925343_123925346	0.0013934	ACUGCAU	BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)
hg18_v1_chr10_+_97879457_97879515	0.00130404	ACUGCAU	CR627437|ZNF518A|9849|zinc finger protein 518A	NM_014803|ZNF518A|9849|zinc finger protein 518A
hg18_v1_chr6_+_4721640_4721678	0.00129157	ACUGCAU	AK291601|CDYL|9425|chromodomain protein, Y-like	BC108725|CDYL|9425|chromodomain protein, Y-like	NM_004824|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr22_+_28609064_28609194	0.00128952	ACUGCAU	BC151217|MTMR3|8897|myotubularin related protein 3	AK289581|MTMR3|8897|myotubularin related protein 3	NM_021090|MTMR3|8897|myotubularin related protein 3	NM_153050|MTMR3|8897|myotubularin related protein 3	NM_153051|MTMR3|8897|myotubularin related protein 3
hg18_v1_chr14_-_94693418_94693672	0.00128019	ACUGCAU	BC046934|DICER1|23405|dicer 1, ribonuclease type III	AB023145|DICER1|23405|dicer 1, ribonuclease type III	BC150287|DICER1|23405|dicer 1, ribonuclease type III	NM_177438|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr12_-_30721410_30721444	0.00126823	ACUGCAU	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr22_-_40172799_40172972	0.00112552	ACUGCAU	NM_016272|TOB2|10766|transducer of ERBB2, 2
hg18_v1_chr6_-_80303822_80303874	0.00106828	ACUGCAU	AK299314|LCA5|167691|Leber congenital amaurosis 5	BX648161|LCA5|167691|Leber congenital amaurosis 5	BC050327|LCA5|167691|Leber congenital amaurosis 5	NM_001122769|LCA5|167691|Leber congenital amaurosis 5	NM_181714|LCA5|167691|Leber congenital amaurosis 5
hg18_v1_chr10_+_11099860_11099932	0.00105668	ACUGCAU	AK314087|CELF2|10659|CUGBP, Elav-like family member 2	NM_006561|CELF2|10659|CUGBP, Elav-like family member 2	BC036391|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr4_+_104009566_104009620	0.0010089	ACUGCAU	NM_001008388|CISD2|493856|CDGSH iron sulfur domain 2	CR617516|CISD2|493856|CDGSH iron sulfur domain 2
hg18_v1_chr12_-_122584019_122584236	0.000991122	ACUGCAU	BC089444|RILPL1|353116|Rab interacting lysosomal protein-like 1	NM_178314|RILPL1|353116|Rab interacting lysosomal protein-like 1
hg18_v1_chr5_-_130998806_130998852	0.000947608	ACUGCAU	BC142964|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	AF478567|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	NM_001164386|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	NM_001164387|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	NM_001164388|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	NM_001164389|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	NM_001164390|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	NM_016340|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6
hg18_v1_chr6_+_31573805_31573949	0.000942104	ACUGCAU	AK291927|MICB|4277|MHC class I polypeptide-related sequence B	NM_005931|MICB|4277|MHC class I polypeptide-related sequence B	BC044218|MICB|4277|MHC class I polypeptide-related sequence B	AK314228|MICB|4277|MHC class I polypeptide-related sequence B	X91625|MICB|4277|MHC class I polypeptide-related sequence B	AY885251|MICB|4277|MHC class I polypeptide-related sequence B
hg18_v1_chr6_-_34772565_34772644	0.000907983	ACUGCAU	NM_022758|C6orf106|64771|chromosome 6 open reading frame 106	NM_024294|C6orf106|64771|chromosome 6 open reading frame 106
hg18_v1_chr15_-_53369261_53369305	0.000881545	ACUGCAU	NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family	AK312836|RAB27A|5873|RAB27A, member RAS oncogene family
hg18_v1_chr9_+_33015207_33015250	0.000777369	ACUGCAU	NM_001539|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1	CR606558|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1	CR611988|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1	CR617243|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1
hg18_v1_chr1_+_200064904_200064922	0.000533785	ACUGCAU	NM_018085|IPO9|55705|importin 9
hg18_v1_chr2_+_112956204_112956271	0.000528606	ACUGCAU	NM_153712|TTL|150465|tubulin tyrosine ligase
hg18_v1_chr17_-_70430839_70430949	0.000445299	ACUGCAU	BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)	BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)	BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)	BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)	AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)	AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)	NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)	AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)
hg18_v1_chr3_+_198079105_198079153	0.000367005	ACUGCAU	AK302305|SENP5|205564|SUMO1/sentrin specific peptidase 5	NM_152699|SENP5|205564|SUMO1/sentrin specific peptidase 5	AK313764|SENP5|205564|SUMO1/sentrin specific peptidase 5
hg18_v1_chr20_-_47965474_47965486	0.000347229	ACUGCAU	AK295536|SPATA2|9825|spermatogenesis associated 2	NM_006038|SPATA2|9825|spermatogenesis associated 2
hg18_v1_chrX_+_21767576_21767664	0.000209254	ACUGCAU	NM_015884|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2
hg18_v1_chr6_+_150731720_150731983	0.000168457	ACUGCAU	AY259176|IYD|389434|iodotyrosine deiodinase	AY259177|IYD|389434|iodotyrosine deiodinase	NM_001164694|IYD|389434|iodotyrosine deiodinase	NM_001164695|IYD|389434|iodotyrosine deiodinase	NM_203395|IYD|389434|iodotyrosine deiodinase	AY957659|IYD|389434|iodotyrosine deiodinase	AY957660|IYD|389434|iodotyrosine deiodinase	AY424901|IYD|389434|iodotyrosine deiodinase	AY424902|IYD|389434|iodotyrosine deiodinase	BC056253|IYD|389434|iodotyrosine deiodinase	AK129950|IYD|389434|iodotyrosine deiodinase	AY957662|IYD|389434|iodotyrosine deiodinase
hg18_v1_chr1_+_9926072_9926094	0.000131056	ACUGCAU	NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1	BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1	AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1	AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1
hg18_v1_chr1_+_202752084_202752167	0.000115243	ACUGCAU	BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)
