hg18_v1_chr11_+_101485946_101486878	1.20859	AGCUUAU	AK300414|YAP1|10413|Yes-associated protein 1	CR618214|YAP1|10413|Yes-associated protein 1	NM_001130145|YAP1|10413|Yes-associated protein 1	NM_001195044|YAP1|10413|Yes-associated protein 1	NM_006106|YAP1|10413|Yes-associated protein 1	BC038235|YAP1|10413|Yes-associated protein 1	AY316529|YAP1|10413|Yes-associated protein 1
hg18_v1_chr12_-_24606616_24606649	1.17143	AGCUUAU	AB081588|SOX5|6660|SRY (sex determining region Y)-box 5	NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5	BC060773|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr3_-_18441763_18441840	1.08514	AGCUUAU	AK127242|SATB1|6304|SATB homeobox 1	NM_001195470|SATB1|6304|SATB homeobox 1	NM_002971|SATB1|6304|SATB homeobox 1
hg18_v1_chr8_+_98950453_98950557	1.04108	AGCUUAU	NM_002380|MATN2|4147|matrilin 2	NM_030583|MATN2|4147|matrilin 2	BC010444|MATN2|4147|matrilin 2	AY358895|MATN2|4147|matrilin 2	AK075489|MATN2|4147|matrilin 2	AL833931|MATN2|4147|matrilin 2	AL137638|MATN2|4147|matrilin 2
hg18_v1_chr3_+_30622905_30623148	1.03844	AGCUUAU	BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)
hg18_v1_chr13_-_79813042_79813088	1.0149	AGCUUAU	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)	NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)
hg18_v1_chr11_-_78829342_78829403	0.887884	AGCUUAU	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)
hg18_v1_chr15_-_31147376_31147679	0.82209	AGCUUAU	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg18_v1_chr11_+_101488380_101488454	0.819201	AGCUUAU	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg18_v1_chr22_+_31526801_31526801	0.745117	AGCUUAU	NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3
hg18_v1_chr8_-_10625352_10625436	0.724488	AGCUUAU	AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7	BT006693|SOX7|83595|SRY (sex determining region Y)-box 7	BC071947|SOX7|83595|SRY (sex determining region Y)-box 7	BC004299|SOX7|83595|SRY (sex determining region Y)-box 7	AK055556|SOX7|83595|SRY (sex determining region Y)-box 7	AK223574|SOX7|83595|SRY (sex determining region Y)-box 7	NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7
hg18_v1_chr4_+_124537334_124537479	0.698419	AGCUUAU	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg18_v1_chr21_-_38792173_38792297	0.685155	AGCUUAU	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr1_+_216585298_216585370	0.681517	AGCUUAU	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr4_+_144477432_144477499	0.664294	AGCUUAU	NM_002039|GAB1|2549|GRB2-associated binding protein 1	NM_207123|GAB1|2549|GRB2-associated binding protein 1	AK289767|GAB1|2549|GRB2-associated binding protein 1	BC064848|GAB1|2549|GRB2-associated binding protein 1
hg18_v1_chr2_+_66516020_66516035	0.656159	AGCUUAU	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg18_v1_chr20_-_22978141_22978335	0.647484	AGCUUAU	BC053357|THBD|7056|thrombomodulin	M16552|THBD|7056|thrombomodulin	X05495|THBD|7056|thrombomodulin	BC035602|THBD|7056|thrombomodulin	NM_000361|THBD|7056|thrombomodulin	AK123557|THBD|7056|thrombomodulin
hg18_v1_chr11_-_114880275_114880506	0.645227	AGCUUAU	AB094146|CADM1|23705|cell adhesion molecule 1	CR457157|CADM1|23705|cell adhesion molecule 1	AF132811|CADM1|23705|cell adhesion molecule 1	BC125102|CADM1|23705|cell adhesion molecule 1	BC125103|CADM1|23705|cell adhesion molecule 1	AY358334|CADM1|23705|cell adhesion molecule 1	AK075502|CADM1|23705|cell adhesion molecule 1	BC035930|CADM1|23705|cell adhesion molecule 1	AK315245|CADM1|23705|cell adhesion molecule 1	BC047021|CADM1|23705|cell adhesion molecule 1	NM_001098517|CADM1|23705|cell adhesion molecule 1	NM_014333|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr1_+_176960896_176961097	0.612413	AGCUUAU	BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2
hg18_v1_chr5_-_38592439_38592532	0.596869	AGCUUAU	AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr2_-_19421852_19421868	0.583998	AGCUUAU	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)	NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)	AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)
hg18_v1_chr1_+_170894780_170894964	0.582397	AGCUUAU	D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)	AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)	NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)	X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)	BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)	U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)	AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)	U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)	DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)	DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)	AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)	AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)
hg18_v1_chr5_+_135392482_135392604	0.561757	AGCUUAU	NM_000358|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	AK094581|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	AK094055|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	AK222833|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	AK298603|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	AK093916|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	AK303643|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	BC026352|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	CR597279|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	BC000097|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	BC004972|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	M77349|TGFBI|7045|transforming growth factor, beta-induced, 68kDa
hg18_v1_chr1_-_68071635_68071762	0.554344	AGCUUAU	AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	CR605876|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12
hg18_v1_chr4_+_124540114_124540132	0.541223	AGCUUAU	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg18_v1_chr3_+_155321826_155321958	0.540444	AGCUUAU	NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26
hg18_v1_chr10_+_124135574_124135574	0.527592	AGCUUAU	AK057463|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	NM_001195608|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
hg18_v1_chr3_-_24511180_24511316	0.527208	AGCUUAU	GQ919288|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286469|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286468|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286465|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286471|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286467|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	NM_001128176|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286466|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AK096628|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	M26747|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	NM_000461|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	NM_001128177|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	X04707|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)
hg18_v1_chr12_-_68369322_68369323	0.509265	AGCUUAU	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg18_v1_chr2_-_47986160_47986435	0.508868	AGCUUAU	BC130445|FBXO11|80204|F-box protein 11	BC136480|FBXO11|80204|F-box protein 11	AK292877|FBXO11|80204|F-box protein 11	AF176706|FBXO11|80204|F-box protein 11	AF174599|FBXO11|80204|F-box protein 11	AK223592|FBXO11|80204|F-box protein 11	BC043258|FBXO11|80204|F-box protein 11	AY827075|FBXO11|80204|F-box protein 11	AK297444|FBXO11|80204|F-box protein 11	NM_001190274|FBXO11|80204|F-box protein 11
hg18_v1_chr1_+_2149993_2150066	0.487807	AGCUUAU	NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)	X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)
hg18_v1_chr5_+_125723686_125723741	0.471815	AGCUUAU	NM_001146319|GRAMD3|65983|GRAM domain containing 3	AK316288|GRAMD3|65983|GRAM domain containing 3	AK300154|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr12_-_10215942_10216056	0.469704	AGCUUAU	AB102861|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	DQ891409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	DQ894585|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	CR602659|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	AF035776|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	AK292124|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	AK295409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	AK298040|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	BC022295|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	BC055085|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	AB010710|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	AK308009|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	NM_001172632|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	NM_001172633|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	NM_002543|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1
hg18_v1_chr7_+_101247601_101247601	0.468726	AGCUUAU	M74099|CUX1|1523|cut-like homeobox 1	NM_181552|CUX1|1523|cut-like homeobox 1
hg18_v1_chr5_-_54317102_54317179	0.468106	AGCUUAU	AJ973643|ESM1|11082|endothelial cell-specific molecule 1	X89426|ESM1|11082|endothelial cell-specific molecule 1	BC011989|ESM1|11082|endothelial cell-specific molecule 1	NM_001135604|ESM1|11082|endothelial cell-specific molecule 1	NM_007036|ESM1|11082|endothelial cell-specific molecule 1	AK300634|ESM1|11082|endothelial cell-specific molecule 1	AK311817|ESM1|11082|endothelial cell-specific molecule 1
hg18_v1_chr9_-_97319067_97319159	0.463707	AGCUUAU	AB189436|PTCH1|5727|patched 1	AB189437|PTCH1|5727|patched 1	NM_001083602|PTCH1|5727|patched 1	NM_001083603|PTCH1|5727|patched 1	BC043542|PTCH1|5727|patched 1
hg18_v1_chr8_-_75396016_75396150	0.450666	AGCUUAU	BX537756|JPH1|56704|junctophilin 1	BC139832|JPH1|56704|junctophilin 1	BC098299|JPH1|56704|junctophilin 1	BC098314|JPH1|56704|junctophilin 1	BC099736|JPH1|56704|junctophilin 1	BC113856|JPH1|56704|junctophilin 1	BC114464|JPH1|56704|junctophilin 1	NM_020647|JPH1|56704|junctophilin 1	BC140875|JPH1|56704|junctophilin 1	BC140876|JPH1|56704|junctophilin 1
hg18_v1_chr1_+_61319976_61320121	0.425861	AGCUUAU	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg18_v1_chr1_-_212791597_212791646	0.41996	AGCUUAU	NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14
hg18_v1_chr1_+_61320213_61321079	0.406742	AGCUUAU	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg18_v1_chr12_-_12310969_12311250	0.39867	AGCUUAU	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6	BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6	BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6	AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6	NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6
hg18_v1_chr13_-_109757442_109757578	0.375565	AGCUUAU	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr20_-_10602429_10602710	0.37408	AGCUUAU	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr2_+_166034402_166034458	0.370647	AGCUUAU	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr11_-_63292688_63292857	0.370339	AGCUUAU	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg18_v1_chr9_-_14304036_14304145	0.360031	AGCUUAU	BX648845|NFIB|4781|nuclear factor I/B	NM_001190737|NFIB|4781|nuclear factor I/B	NM_005596|NFIB|4781|nuclear factor I/B
hg18_v1_chr10_+_124124083_124124136	0.358061	AGCUUAU	NM_001001974|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
hg18_v1_chr2_+_228386800_228386871	0.355414	AGCUUAU	BC020698|CCL20|6364|chemokine (C-C motif) ligand 20	NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20	NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20	D86955|CCL20|6364|chemokine (C-C motif) ligand 20	U64197|CCL20|6364|chemokine (C-C motif) ligand 20	DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20	DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20	U77035|CCL20|6364|chemokine (C-C motif) ligand 20
hg18_v1_chr6_+_148705421_148705491	0.354048	AGCUUAU	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr2_+_166137091_166137100	0.349524	AGCUUAU	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr4_+_86615275_86615459	0.334527	AGCUUAU	NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24	AK091196|ARHGAP24|83478|Rho GTPase activating protein 24	BC047918|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr13_+_72531098_72531313	0.333261	AGCUUAU	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)	NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)	AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)	BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)	AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)	BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)	AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)	BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)
hg18_v1_chr2_+_20510312_20510315	0.314922	AGCUUAU	AK312487|RHOB|388|ras homolog gene family, member B	AK124398|RHOB|388|ras homolog gene family, member B	BC066954|RHOB|388|ras homolog gene family, member B	NM_004040|RHOB|388|ras homolog gene family, member B
hg18_v1_chr4_-_89963177_89963431	0.312379	AGCUUAU	AB020721|FAM13A|10144|family with sequence similarity 13, member A	AK027138|FAM13A|10144|family with sequence similarity 13, member A	BC033006|FAM13A|10144|family with sequence similarity 13, member A	BC086875|FAM13A|10144|family with sequence similarity 13, member A	BC058029|FAM13A|10144|family with sequence similarity 13, member A	AK296932|FAM13A|10144|family with sequence similarity 13, member A	NM_001015045|FAM13A|10144|family with sequence similarity 13, member A	AK091787|FAM13A|10144|family with sequence similarity 13, member A
hg18_v1_chr10_+_124141808_124141832	0.311019	AGCUUAU	NM_021622|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	AF286160|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
hg18_v1_chr1_+_61315516_61315533	0.30099	AGCUUAU	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr12_+_32546243_32546370	0.295287	AGCUUAU	BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4
hg18_v1_chr5_-_141684759_141684878	0.29057	AGCUUAU	AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)	NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)	NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)
hg18_v1_chr8_-_81949570_81949570	0.284162	AGCUUAU	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg18_v1_chr10_+_75427853_75427971	0.282717	AGCUUAU	AK304823|VCL|7414|vinculin	NM_003373|VCL|7414|vinculin	NM_014000|VCL|7414|vinculin	AK300280|VCL|7414|vinculin	AK296509|VCL|7414|vinculin	BC039174|VCL|7414|vinculin	M33308|VCL|7414|vinculin	DQ894680|VCL|7414|vinculin
hg18_v1_chr3_+_42670179_42670179	0.282601	AGCUUAU	AK127065|ZBTB47|92999|zinc finger and BTB domain containing 47	NM_145166|ZBTB47|92999|zinc finger and BTB domain containing 47
hg18_v1_chr1_+_64983312_64983462	0.279459	AGCUUAU	AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2	NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2
hg18_v1_chr7_-_139523187_139523475	0.277457	AGCUUAU	AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)	NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)
hg18_v1_chr18_-_44723116_44723174	0.274608	AGCUUAU	AK131394|SMAD7|4092|SMAD family member 7	NM_001190823|SMAD7|4092|SMAD family member 7
hg18_v1_chr5_+_60663842_60663869	0.273736	AGCUUAU	NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6
hg18_v1_chr12_-_23993830_23993908	0.267773	AGCUUAU	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr2_+_202949289_202949294	0.247166	AGCUUAU	NM_001204|BMPR2|659|bone morphogenetic protein receptor, type II (serine/threonine kinase)
hg18_v1_chr7_+_28305464_28305464	0.237966	AGCUUAU	L05913|CREB5|9586|cAMP responsive element binding protein 5	NM_182899|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr4_+_86918870_86918874	0.233933	AGCUUAU	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr1_-_150233337_150233337	0.220223	AGCUUAU	NM_002966|S100A10|6281|S100 calcium binding protein A10
hg18_v1_chr17_+_17883309_17883755	0.215706	AGCUUAU	BC041829|C17orf39|79018|chromosome 17 open reading frame 39	NM_024052|C17orf39|79018|chromosome 17 open reading frame 39	AK315083|C17orf39|79018|chromosome 17 open reading frame 39	AK074284|C17orf39|79018|chromosome 17 open reading frame 39	AK127580|C17orf39|79018|chromosome 17 open reading frame 39	BC000636|C17orf39|79018|chromosome 17 open reading frame 39
hg18_v1_chr17_-_29714293_29714364	0.212159	AGCUUAU	BC105073|CCL1|6346|chemokine (C-C motif) ligand 1	BC105075|CCL1|6346|chemokine (C-C motif) ligand 1	M57502|CCL1|6346|chemokine (C-C motif) ligand 1	AK312183|CCL1|6346|chemokine (C-C motif) ligand 1	NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1
hg18_v1_chr5_+_125786717_125786767	0.207197	AGCUUAU	NM_001146320|GRAMD3|65983|GRAM domain containing 3	NM_001146321|GRAMD3|65983|GRAM domain containing 3	NM_023927|GRAMD3|65983|GRAM domain containing 3
hg18_v1_chr4_-_87247829_87247829	0.206054	AGCUUAU	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr4_+_25930405_25930429	0.205401	AGCUUAU	L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr12_+_120944174_120944378	0.205012	AGCUUAU	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A	NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A	NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A	AK316486|BCL7A|605|B-cell CLL/lymphoma 7A	BC113627|BCL7A|605|B-cell CLL/lymphoma 7A	BC094723|BCL7A|605|B-cell CLL/lymphoma 7A
hg18_v1_chr7_+_20337249_20337270	0.202125	AGCUUAU	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr3_+_29297806_29298130	0.190813	AGCUUAU	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3
hg18_v1_chr5_-_141973875_141973909	0.186018	AGCUUAU	S67291|FGF1|2246|fibroblast growth factor 1 (acidic)	S67292|FGF1|2246|fibroblast growth factor 1 (acidic)	S67294|FGF1|2246|fibroblast growth factor 1 (acidic)	X65778|FGF1|2246|fibroblast growth factor 1 (acidic)	X65779|FGF1|2246|fibroblast growth factor 1 (acidic)	M13361|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)	X51943|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr6_-_159386007_159386171	0.183365	AGCUUAU	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr9_+_36026900_36026994	0.179854	AGCUUAU	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	CR593801|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg18_v1_chr2_+_148319033_148319191	0.176953	AGCUUAU	D31770|ACVR2A|92|activin A receptor, type IIA	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr4_+_87070449_87070449	0.172476	AGCUUAU	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24	NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr8_-_97316933_97317037	0.16602	AGCUUAU	CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein	NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein
hg18_v1_chr7_-_91713044_91713176	0.159907	AGCUUAU	AF296765|KRIT1|889|KRIT1, ankyrin repeat containing	AF310133|KRIT1|889|KRIT1, ankyrin repeat containing	AY380057|KRIT1|889|KRIT1, ankyrin repeat containing	AY380058|KRIT1|889|KRIT1, ankyrin repeat containing	AY380059|KRIT1|889|KRIT1, ankyrin repeat containing	AY380060|KRIT1|889|KRIT1, ankyrin repeat containing	NM_004912|KRIT1|889|KRIT1, ankyrin repeat containing	AK055305|KRIT1|889|KRIT1, ankyrin repeat containing	NM_001013406|KRIT1|889|KRIT1, ankyrin repeat containing	NM_194454|KRIT1|889|KRIT1, ankyrin repeat containing
hg18_v1_chr4_-_103968104_103968444	0.159423	AGCUUAU	BC037894|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_003340|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181886|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181888|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC003395|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK315775|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181889|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
hg18_v1_chr2_-_238861830_238862089	0.156961	AGCUUAU	AB002345|PER2|8864|period homolog 2 (Drosophila)	AK294876|PER2|8864|period homolog 2 (Drosophila)	NM_022817|PER2|8864|period homolog 2 (Drosophila)
hg18_v1_chr14_-_87806913_87807026	0.153311	AGCUUAU	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chrX_+_122922058_122922352	0.153213	AGCUUAU	NM_001042749|STAG2|10735|stromal antigen 2	AK098737|STAG2|10735|stromal antigen 2	BX640970|STAG2|10735|stromal antigen 2	AK298633|STAG2|10735|stromal antigen 2	AK313559|STAG2|10735|stromal antigen 2
hg18_v1_chr4_+_38341982_38342461	0.152428	AGCUUAU	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr9_-_97310142_97310142	0.152161	AGCUUAU	AB189438|PTCH1|5727|patched 1	AB189439|PTCH1|5727|patched 1	NM_001083604|PTCH1|5727|patched 1	NM_001083605|PTCH1|5727|patched 1
hg18_v1_chr5_-_32348826_32348954	0.151766	AGCUUAU	AK000483|MTMR12|54545|myotubularin related protein 12	NM_001040446|MTMR12|54545|myotubularin related protein 12
hg18_v1_chr2_-_158193639_158193647	0.148541	AGCUUAU	BC022530|ACVR1C|130399|activin A receptor, type IC	NM_001111032|ACVR1C|130399|activin A receptor, type IC	NM_001111033|ACVR1C|130399|activin A receptor, type IC	NM_145259|ACVR1C|130399|activin A receptor, type IC
hg18_v1_chr5_-_142057692_142057818	0.147666	AGCUUAU	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr11_+_119712827_119712827	0.14521	AGCUUAU	BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12
hg18_v1_chr2_-_47969350_47969361	0.145031	AGCUUAU	AK304140|FBXO11|80204|F-box protein 11	AK315108|FBXO11|80204|F-box protein 11	NM_025133|FBXO11|80204|F-box protein 11
hg18_v1_chr2_+_65136989_65137139	0.143982	AGCUUAU	AB011154|CEP68|23177|centrosomal protein 68kDa	NM_015147|CEP68|23177|centrosomal protein 68kDa	AK093846|CEP68|23177|centrosomal protein 68kDa	AK000856|CEP68|23177|centrosomal protein 68kDa	AK299373|CEP68|23177|centrosomal protein 68kDa	AK304110|CEP68|23177|centrosomal protein 68kDa	AK301173|CEP68|23177|centrosomal protein 68kDa	AK098786|CEP68|23177|centrosomal protein 68kDa	BX648774|CEP68|23177|centrosomal protein 68kDa	BC030534|CEP68|23177|centrosomal protein 68kDa	BC002982|CEP68|23177|centrosomal protein 68kDa	BC004873|CEP68|23177|centrosomal protein 68kDa
hg18_v1_chr3_-_52694554_52695065	0.142318	AGCUUAU	AF197569|PBRM1|55193|polybromo 1	NM_018313|PBRM1|55193|polybromo 1
hg18_v1_chr1_-_40140126_40140273	0.136139	AGCUUAU	CR614411|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg18_v1_chr5_-_141981083_141981090	0.135593	AGCUUAU	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)	BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr8_+_87424074_87424259	0.134241	AGCUUAU	AY345857|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1	AK292800|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1	BC036065|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1	NM_007013|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1
hg18_v1_chr1_-_26553168_26553207	0.130429	AGCUUAU	AK000902|AIM1L|55057|absent in melanoma 1-like	NM_001039775|AIM1L|55057|absent in melanoma 1-like
hg18_v1_chr2_-_172675480_172675723	0.130204	AGCUUAU	CR592469|DLX2|1746|distal-less homeobox 2	AB208823|DLX2|1746|distal-less homeobox 2	AK297503|DLX2|1746|distal-less homeobox 2	BC032558|DLX2|1746|distal-less homeobox 2	NM_004405|DLX2|1746|distal-less homeobox 2
hg18_v1_chr18_-_27777085_27777128	0.129055	AGCUUAU	NM_014939|TRAPPC8|22878|trafficking protein particle complex 8	AL136749|TRAPPC8|22878|trafficking protein particle complex 8
hg18_v1_chr8_+_75899326_75899326	0.128823	AGCUUAU	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg18_v1_chr3_+_99934227_99934327	0.125501	AGCUUAU	AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg18_v1_chr15_+_38520594_38520716	0.124778	AGCUUAU	BC022782|BAHD1|22893|bromo adjacent homology domain containing 1	NM_014952|BAHD1|22893|bromo adjacent homology domain containing 1
hg18_v1_chr3_-_18455207_18455268	0.118132	AGCUUAU	BC001744|SATB1|6304|SATB homeobox 1	NM_001131010|SATB1|6304|SATB homeobox 1
hg18_v1_chr4_-_87593306_87593389	0.116886	AGCUUAU	NM_002753|MAPK10|5602|mitogen-activated protein kinase 10	U07620|MAPK10|5602|mitogen-activated protein kinase 10	BC051731|MAPK10|5602|mitogen-activated protein kinase 10	AK225974|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr5_-_38631263_38631263	0.11653	AGCUUAU	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr14_+_32478209_32478273	0.115724	AGCUUAU	AF164438|NPAS3|64067|neuronal PAS domain protein 3	AY157302|NPAS3|64067|neuronal PAS domain protein 3	NM_001164749|NPAS3|64067|neuronal PAS domain protein 3	NM_001165893|NPAS3|64067|neuronal PAS domain protein 3	NM_022123|NPAS3|64067|neuronal PAS domain protein 3	NM_173159|NPAS3|64067|neuronal PAS domain protein 3	AB054575|NPAS3|64067|neuronal PAS domain protein 3	AB054576|NPAS3|64067|neuronal PAS domain protein 3	AB055962|NPAS3|64067|neuronal PAS domain protein 3
hg18_v1_chr5_+_67622242_67622383	0.115574	AGCUUAU	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr9_-_97310651_97310759	0.1113	AGCUUAU	NM_000264|PTCH1|5727|patched 1
hg18_v1_chr7_-_138316393_138317153	0.111284	AGCUUAU	AM989468|KIAA1549|57670|KIAA1549	AM989469|KIAA1549|57670|KIAA1549	NM_001164665|KIAA1549|57670|KIAA1549	NM_020910|KIAA1549|57670|KIAA1549
hg18_v1_chr12_+_5473558_5473641	0.110756	AGCUUAU	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg18_v1_chr6_-_134415311_134415481	0.108448	AGCUUAU	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg18_v1_chr4_+_154083584_154083697	0.107586	AGCUUAU	NM_033393|FHDC1|85462|FH2 domain containing 1	AB051514|FHDC1|85462|FH2 domain containing 1
hg18_v1_chr20_+_3775421_3775572	0.106908	AGCUUAU	NM_020746|MAVS|57506|mitochondrial antiviral signaling protein	AK296897|MAVS|57506|mitochondrial antiviral signaling protein	AB097003|MAVS|57506|mitochondrial antiviral signaling protein	AK123956|MAVS|57506|mitochondrial antiviral signaling protein	AK291785|MAVS|57506|mitochondrial antiviral signaling protein	BX649084|MAVS|57506|mitochondrial antiviral signaling protein	AK023799|MAVS|57506|mitochondrial antiviral signaling protein	BC044952|MAVS|57506|mitochondrial antiviral signaling protein	CR613265|MAVS|57506|mitochondrial antiviral signaling protein	AK130992|MAVS|57506|mitochondrial antiviral signaling protein
hg18_v1_chr13_-_35818603_35818645	0.106454	AGCUUAU	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr9_-_122516399_122516678	0.105279	AGCUUAU	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg18_v1_chr4_-_103967784_103967859	0.0989628	AGCUUAU	CR619029|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC066917|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	CR608063|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181887|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181891|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	CR620503|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AL833414|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
hg18_v1_chr2_-_71307705_71307768	0.0982264	AGCUUAU	AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B	NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B
hg18_v1_chr6_-_116681863_116681994	0.0916612	AGCUUAU	BC040453|TSPYL4|23270|TSPY-like 4	AB018264|TSPYL4|23270|TSPY-like 4	NM_021648|TSPYL4|23270|TSPY-like 4	AK302542|TSPYL4|23270|TSPY-like 4	AK091559|TSPYL4|23270|TSPY-like 4
hg18_v1_chr1_-_72520735_72520864	0.0915229	AGCUUAU	AK295481|NEGR1|257194|neuronal growth regulator 1	BX538014|NEGR1|257194|neuronal growth regulator 1	AK092307|NEGR1|257194|neuronal growth regulator 1	NM_173808|NEGR1|257194|neuronal growth regulator 1
hg18_v1_chr2_+_26840626_26840721	0.0913639	AGCUUAU	AK000562|C2orf18|54978|chromosome 2 open reading frame 18	NM_017877|C2orf18|54978|chromosome 2 open reading frame 18	BC028081|C2orf18|54978|chromosome 2 open reading frame 18	BC035519|C2orf18|54978|chromosome 2 open reading frame 18	BX647807|C2orf18|54978|chromosome 2 open reading frame 18	AK075164|C2orf18|54978|chromosome 2 open reading frame 18	AK296996|C2orf18|54978|chromosome 2 open reading frame 18	BC011013|CENPA|1058|centromere protein A	AK299598|C2orf18|54978|chromosome 2 open reading frame 18	AY358820|C2orf18|54978|chromosome 2 open reading frame 18	AK222929|C2orf18|54978|chromosome 2 open reading frame 18	BX648017|C2orf18|54978|chromosome 2 open reading frame 18	CR457243|C2orf18|54978|chromosome 2 open reading frame 18
hg18_v1_chr3_+_188130967_188131040	0.0877368	AGCUUAU	NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr2_+_45732416_45732741	0.0864141	AGCUUAU	AL832345|PRKCE|5581|protein kinase C, epsilon	NM_005400|PRKCE|5581|protein kinase C, epsilon	BC109033|PRKCE|5581|protein kinase C, epsilon	BC109034|PRKCE|5581|protein kinase C, epsilon	AK313842|PRKCE|5581|protein kinase C, epsilon	X65293|PRKCE|5581|protein kinase C, epsilon
hg18_v1_chr12_+_46802695_46802829	0.0856627	AGCUUAU	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg18_v1_chr10_-_93992982_93993017	0.0851745	AGCUUAU	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg18_v1_chr3_+_153499883_153499883	0.0851363	AGCUUAU	NM_207293|MBNL1|4154|muscleblind-like (Drosophila)	NM_207294|MBNL1|4154|muscleblind-like (Drosophila)	NM_207295|MBNL1|4154|muscleblind-like (Drosophila)	NM_207296|MBNL1|4154|muscleblind-like (Drosophila)	NM_207297|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr6_+_36670067_36670072	0.0851264	AGCUUAU	NM_003017|SRSF3|6428|serine/arginine-rich splicing factor 3
hg18_v1_chr1_+_117950029_117950189	0.0843072	AGCUUAU	NM_017709|FAM46C|54855|family with sequence similarity 46, member C
hg18_v1_chr15_-_47125788_47126069	0.0808974	AGCUUAU	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr6_+_33046636_33046702	0.0793188	AGCUUAU	BX648109|BRD2|6046|bromodomain containing 2	NM_001113182|BRD2|6046|bromodomain containing 2	AK056504|BRD2|6046|bromodomain containing 2
hg18_v1_chr2_-_55313202_55313202	0.078088	AGCUUAU	BC036908|C2orf63|130162|chromosome 2 open reading frame 63	NM_001135598|C2orf63|130162|chromosome 2 open reading frame 63
hg18_v1_chr15_+_36332258_36332370	0.0774166	AGCUUAU	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1	AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr17_+_21131940_21131940	0.077322	AGCUUAU	NM_002756|MAP2K3|5606|mitogen-activated protein kinase kinase 3
hg18_v1_chr5_-_142045770_142045836	0.0757619	AGCUUAU	M60516|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr1_+_32777358_32777358	0.0753109	AGCUUAU	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr6_+_3966499_3966677	0.0749637	AGCUUAU	BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
hg18_v1_chr4_-_90197140_90197345	0.0746905	AGCUUAU	BC063126|FAM13A|10144|family with sequence similarity 13, member A	BC041029|FAM13A|10144|family with sequence similarity 13, member A	CR610852|FAM13A|10144|family with sequence similarity 13, member A	BC053569|FAM13A|10144|family with sequence similarity 13, member A	BX647410|FAM13A|10144|family with sequence similarity 13, member A	CR615111|FAM13A|10144|family with sequence similarity 13, member A	NM_014883|FAM13A|10144|family with sequence similarity 13, member A
hg18_v1_chr13_-_35842289_35842316	0.0717696	AGCUUAU	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr2_-_218516950_218517102	0.0715941	AGCUUAU	BC140942|TNS1|7145|tensin 1	AK300345|TNS1|7145|tensin 1	NM_022648|TNS1|7145|tensin 1
hg18_v1_chr5_+_56146656_56146656	0.0714643	AGCUUAU	NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1
hg18_v1_chr9_+_21792631_21792650	0.0710223	AGCUUAU	AF109294|MTAP|4507|methylthioadenosine phosphorylase	AY712791|MTAP|4507|methylthioadenosine phosphorylase	NM_002451|MTAP|4507|methylthioadenosine phosphorylase	U22233|MTAP|4507|methylthioadenosine phosphorylase	L40432|MTAP|4507|methylthioadenosine phosphorylase	AK300592|MTAP|4507|methylthioadenosine phosphorylase	AK309365|MTAP|4507|methylthioadenosine phosphorylase
hg18_v1_chr3_+_153468518_153468518	0.0707674	AGCUUAU	NM_021038|MBNL1|4154|muscleblind-like (Drosophila)	NM_207292|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr5_-_142046175_142046243	0.0706281	AGCUUAU	M74028|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)	AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr1_-_243094431_243094463	0.0698276	AGCUUAU	AF068846|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)	NM_004501|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)	NM_031844|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg18_v1_chr7_-_91713232_91713467	0.0693507	AGCUUAU	AJ294850|KRIT1|889|KRIT1, ankyrin repeat containing	AF388384|KRIT1|889|KRIT1, ankyrin repeat containing	NM_194455|KRIT1|889|KRIT1, ankyrin repeat containing	NM_194456|KRIT1|889|KRIT1, ankyrin repeat containing
hg18_v1_chr21_-_31853160_31853298	0.0681024	AGCUUAU	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1
hg18_v1_chrX_-_18282698_18282764	0.0679371	AGCUUAU	Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)
hg18_v1_chr5_-_150060790_150060861	0.0678652	AGCUUAU	AL136933|RBM22|55696|RNA binding motif protein 22	BC003402|RBM22|55696|RNA binding motif protein 22	AK001152|RBM22|55696|RNA binding motif protein 22	NM_018047|RBM22|55696|RNA binding motif protein 22
hg18_v1_chr7_-_29995809_29996258	0.0667413	AGCUUAU	AB071705|SCRN1|9805|secernin 1	AK295713|SCRN1|9805|secernin 1	D83777|SCRN1|9805|secernin 1	AK293462|SCRN1|9805|secernin 1	BC040492|SCRN1|9805|secernin 1	NM_001145515|SCRN1|9805|secernin 1	NM_014766|SCRN1|9805|secernin 1	NM_001145513|SCRN1|9805|secernin 1
hg18_v1_chr2_+_6935246_6935382	0.0659667	AGCUUAU	NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2	CR598269|RSAD2|91543|radical S-adenosyl methionine domain containing 2	AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2	AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2	BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2	DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2	DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2
hg18_v1_chr16_+_55950195_55950228	0.0651401	AGCUUAU	NM_002990|CCL22|6367|chemokine (C-C motif) ligand 22	AK311970|CCL22|6367|chemokine (C-C motif) ligand 22	U83171|CCL22|6367|chemokine (C-C motif) ligand 22	U83239|CCL22|6367|chemokine (C-C motif) ligand 22	BC027952|CCL22|6367|chemokine (C-C motif) ligand 22	DQ890922|CCL22|6367|chemokine (C-C motif) ligand 22	DQ893311|CCL22|6367|chemokine (C-C motif) ligand 22	DQ894072|CCL22|6367|chemokine (C-C motif) ligand 22	DQ896625|CCL22|6367|chemokine (C-C motif) ligand 22	EU176526|CCL22|6367|chemokine (C-C motif) ligand 22
hg18_v1_chrX_+_122923236_122923272	0.064841	AGCUUAU	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg18_v1_chr11_+_32808045_32808208	0.0633219	AGCUUAU	BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
hg18_v1_chr15_+_56850681_56850717	0.0630055	AGCUUAU	AL833610|FAM63B|54629|family with sequence similarity 63, member B	NM_001040450|FAM63B|54629|family with sequence similarity 63, member B	NM_001040453|FAM63B|54629|family with sequence similarity 63, member B
hg18_v1_chr14_+_36736867_36736871	0.0592732	AGCUUAU	NM_001195296|MIPOL1|145282|mirror-image polydactyly 1	NM_001195297|MIPOL1|145282|mirror-image polydactyly 1	NM_138731|MIPOL1|145282|mirror-image polydactyly 1
hg18_v1_chr14_-_98807574_98807712	0.0587255	AGCUUAU	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)
hg18_v1_chr9_+_114552871_114552954	0.0561636	AGCUUAU	NM_001012994|SNX30|401548|sorting nexin family member 30
hg18_v1_chr1_+_36046373_36046442	0.0556685	AGCUUAU	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg18_v1_chr1_+_28159068_28159142	0.0537665	AGCUUAU	AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8	AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8
hg18_v1_chr9_-_97309507_97309535	0.050634	AGCUUAU	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg18_v1_chrX_-_106130098_106130163	0.0499775	AGCUUAU	EF125210|MORC4|79710|MORC family CW-type zinc finger 4	NM_001085354|MORC4|79710|MORC family CW-type zinc finger 4	NM_024657|MORC4|79710|MORC family CW-type zinc finger 4
hg18_v1_chr12_-_38300109_38300109	0.0499223	AGCUUAU	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg18_v1_chr7_-_92303865_92303876	0.049827	AGCUUAU	NM_001145306|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr5_-_89806188_89806480	0.0495386	AGCUUAU	BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2	NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2
hg18_v1_chr2_-_131838200_131838200	0.049298	AGCUUAU	NM_001077637|LOC150786|150786|RAB6C-like
hg18_v1_chr12_+_120726963_120727020	0.0478196	AGCUUAU	NM_015048|SETD1B|23067|SET domain containing 1B
hg18_v1_chr15_+_92642433_92642498	0.0470048	AGCUUAU	NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2	NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2	AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2	BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2
hg18_v1_chr1_-_150002595_150002663	0.046822	AGCUUAU	AK026363|MRPL9|65005|mitochondrial ribosomal protein L9	AK309841|MRPL9|65005|mitochondrial ribosomal protein L9	NM_031420|MRPL9|65005|mitochondrial ribosomal protein L9
hg18_v1_chr13_-_40604587_40605003	0.041414	AGCUUAU	AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6
hg18_v1_chr2_-_201644634_201644661	0.0413052	AGCUUAU	AK124184|FAM126B|285172|family with sequence similarity 126, member B	BC039295|FAM126B|285172|family with sequence similarity 126, member B	NM_173822|FAM126B|285172|family with sequence similarity 126, member B
hg18_v1_chr11_-_16387001_16387005	0.0412362	AGCUUAU	BC037866|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr1_-_36624071_36624086	0.0401016	AGCUUAU	AL834137|STK40|83931|serine/threonine kinase 40	NM_032017|STK40|83931|serine/threonine kinase 40	BC008344|STK40|83931|serine/threonine kinase 40	BC007835|STK40|83931|serine/threonine kinase 40	AY198395|STK40|83931|serine/threonine kinase 40
hg18_v1_chr4_-_104009443_104009472	0.0384446	AGCUUAU	NM_181893|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181890|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
hg18_v1_chr16_+_66855827_66856075	0.0379158	AGCUUAU	CR623370|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	NM_001076785|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	NM_003983|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	CR749291|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	CR606394|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	CR749475|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK310866|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	BC028216|SLC7A6|9057|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
hg18_v1_chr19_-_63353956_63353965	0.0378609	AGCUUAU	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg18_v1_chr16_-_4528380_4528496	0.0374182	AGCUUAU	AF195661|C16orf5|29965|chromosome 16 open reading frame 5	AL833853|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199054|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr11_-_128399218_128399325	0.0373876	AGCUUAU	AB018255|ARHGAP32|9743|Rho GTPase activating protein 32	AY194287|ARHGAP32|9743|Rho GTPase activating protein 32	AB079856|ARHGAP32|9743|Rho GTPase activating protein 32	NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr9_-_97309301_97309301	0.0368131	AGCUUAU	AB189440|PTCH1|5727|patched 1	NM_001083607|PTCH1|5727|patched 1
hg18_v1_chr17_-_37794017_37794099	0.0357957	AGCUUAU	L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)
hg18_v1_chr6_-_46997579_46997672	0.0357804	AGCUUAU	AL832125|GPR116|221395|G protein-coupled receptor 116	AB018301|GPR116|221395|G protein-coupled receptor 116	AK289503|GPR116|221395|G protein-coupled receptor 116	AK092043|GPR116|221395|G protein-coupled receptor 116	NM_001098518|GPR116|221395|G protein-coupled receptor 116
hg18_v1_chr2_-_55312910_55312952	0.0328102	AGCUUAU	AK315683|C2orf63|130162|chromosome 2 open reading frame 63	AK056000|C2orf63|130162|chromosome 2 open reading frame 63	BC029502|C2orf63|130162|chromosome 2 open reading frame 63	NM_152385|C2orf63|130162|chromosome 2 open reading frame 63
hg18_v1_chr2_+_130453704_130453706	0.0309866	AGCUUAU	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg18_v1_chr11_+_120668553_120668677	0.0292609	AGCUUAU	NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like
hg18_v1_chr15_+_63948823_63948980	0.0288009	AGCUUAU	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family	AK298961|RAB11A|8766|RAB11A, member RAS oncogene family	NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family	CR606451|RAB11A|8766|RAB11A, member RAS oncogene family	AK311770|RAB11A|8766|RAB11A, member RAS oncogene family	BC013348|RAB11A|8766|RAB11A, member RAS oncogene family	AF000231|RAB11A|8766|RAB11A, member RAS oncogene family	X56740|RAB11A|8766|RAB11A, member RAS oncogene family	AK300008|RAB11A|8766|RAB11A, member RAS oncogene family	AF498946|RAB11A|8766|RAB11A, member RAS oncogene family	BT020151|RAB11A|8766|RAB11A, member RAS oncogene family	BT020154|RAB11A|8766|RAB11A, member RAS oncogene family	CR407669|RAB11A|8766|RAB11A, member RAS oncogene family	CR536493|RAB11A|8766|RAB11A, member RAS oncogene family	DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family	DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family	X53143|RAB11A|8766|RAB11A, member RAS oncogene family
hg18_v1_chr14_-_91576037_91576170	0.0285844	AGCUUAU	BC146845|TRIP11|9321|thyroid hormone receptor interactor 11	AF007217|TRIP11|9321|thyroid hormone receptor interactor 11	BC002656|TRIP11|9321|thyroid hormone receptor interactor 11	BC069008|TRIP11|9321|thyroid hormone receptor interactor 11	Y12490|TRIP11|9321|thyroid hormone receptor interactor 11	AK307489|TRIP11|9321|thyroid hormone receptor interactor 11	NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11
hg18_v1_chr3_+_43303005_43303141	0.0278401	AGCUUAU	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr8_+_8897723_8897828	0.0278317	AGCUUAU	NM_153332|ERI1|90459|exoribonuclease 1	AL137679|ERI1|90459|exoribonuclease 1
hg18_v1_chr8_-_101641046_101641187	0.0272463	AGCUUAU	BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62	BC035087|ANKRD46|157567|ankyrin repeat domain 46	BC050396|ANKRD46|157567|ankyrin repeat domain 46	AL832842|ANKRD46|157567|ankyrin repeat domain 46	AK095235|ANKRD46|157567|ankyrin repeat domain 46	BC060843|ANKRD46|157567|ankyrin repeat domain 46	AB077205|ANKRD46|157567|ankyrin repeat domain 46	NM_198401|ANKRD46|157567|ankyrin repeat domain 46
hg18_v1_chr11_-_16454493_16454510	0.0270905	AGCUUAU	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr15_-_73658563_73658679	0.027	AGCUUAU	M83738|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9	NM_002833|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9
hg18_v1_chr12_+_27066749_27066749	0.0261137	AGCUUAU	AK309064|MED21|9412|mediator complex subunit 21	BC008380|MED21|9412|mediator complex subunit 21	NM_004264|MED21|9412|mediator complex subunit 21
hg18_v1_chr15_+_47502666_47502771	0.0254454	AGCUUAU	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr14_-_101841222_101841283	0.0230183	AGCUUAU	AK094747|RAGE|5891|renal tumor antigen	BC053536|RAGE|5891|renal tumor antigen	BC026069|RAGE|5891|renal tumor antigen	AK302349|RAGE|5891|renal tumor antigen	AK312778|RAGE|5891|renal tumor antigen	AB022694|RAGE|5891|renal tumor antigen	NM_014226|RAGE|5891|renal tumor antigen
hg18_v1_chr2_-_60633908_60634145	0.0222217	AGCUUAU	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg18_v1_chr7_-_29996429_29996429	0.022172	AGCUUAU	AK295172|SCRN1|9805|secernin 1	NM_001145514|SCRN1|9805|secernin 1
hg18_v1_chr2_-_69467825_69467994	0.0220904	AGCUUAU	M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1	BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1	NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1
hg18_v1_chr11_+_120668711_120668818	0.0187652	AGCUUAU	BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like
hg18_v1_chr12_-_43556899_43556899	0.0181714	AGCUUAU	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr16_-_4837266_4837312	0.017953	AGCUUAU	AF326966|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	AY352585|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	BC064940|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	AK307834|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	AK296842|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	BC047223|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	CR933687|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	AF244907|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	BC032855|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	NM_032569|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)
hg18_v1_chr4_-_102487649_102487658	0.0175403	AGCUUAU	BC098424|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	EU192652|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	NM_000944|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	NM_001130691|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	NM_001130692|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	EU192653|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme
hg18_v1_chr18_-_44731078_44731078	0.0168215	AGCUUAU	AF010193|SMAD7|4092|SMAD family member 7	NM_001190821|SMAD7|4092|SMAD family member 7	NM_005904|SMAD7|4092|SMAD family member 7
hg18_v1_chr3_-_48204804_48204922	0.0167296	AGCUUAU	BC007401|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	BC018642|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	NM_001789|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	NM_201567|CDC25A|993|cell division cycle 25 homolog A (S. pombe)	M81933|CDC25A|993|cell division cycle 25 homolog A (S. pombe)
hg18_v1_chr4_+_41631862_41632073	0.0161068	AGCUUAU	NM_018126|TMEM33|55161|transmembrane protein 33	CR609993|TMEM33|55161|transmembrane protein 33	AK023062|TMEM33|55161|transmembrane protein 33	AK001387|TMEM33|55161|transmembrane protein 33	AK094190|TMEM33|55161|transmembrane protein 33	AK308501|TMEM33|55161|transmembrane protein 33	AY659966|TMEM33|55161|transmembrane protein 33	CR592529|TMEM33|55161|transmembrane protein 33
hg18_v1_chr1_+_220857774_220858273	0.0160976	AGCUUAU	NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3	AK307412|MIA3|375056|melanoma inhibitory activity family, member 3	AY359091|MIA3|375056|melanoma inhibitory activity family, member 3	DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3
hg18_v1_chr16_-_4528739_4528847	0.0152982	AGCUUAU	BC002882|C16orf5|29965|chromosome 16 open reading frame 5	AK292036|C16orf5|29965|chromosome 16 open reading frame 5	AK302297|C16orf5|29965|chromosome 16 open reading frame 5	AL136698|C16orf5|29965|chromosome 16 open reading frame 5	AK294257|C16orf5|29965|chromosome 16 open reading frame 5	DQ167023|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5	NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5	NM_013399|C16orf5|29965|chromosome 16 open reading frame 5	AK307067|C16orf5|29965|chromosome 16 open reading frame 5	AK308532|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr5_+_139473873_139473950	0.0151413	AGCUUAU	M96684|PURA|5813|purine-rich element binding protein A	NM_005859|PURA|5813|purine-rich element binding protein A	BC110574|PURA|5813|purine-rich element binding protein A	BC110594|PURA|5813|purine-rich element binding protein A	BC036087|PURA|5813|purine-rich element binding protein A	BT019388|PURA|5813|purine-rich element binding protein A
hg18_v1_chr7_-_92301147_92301166	0.0151223	AGCUUAU	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr15_+_67378326_67378359	0.012518	AGCUUAU	CR609133|PAQR5|54852|progestin and adipoQ receptor family member V	BC039234|PAQR5|54852|progestin and adipoQ receptor family member V	NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V
hg18_v1_chr7_+_113842284_113842382	0.0119652	AGCUUAU	AY144615|FOXP2|93986|forkhead box P2	BC018016|FOXP2|93986|forkhead box P2	NM_001172766|FOXP2|93986|forkhead box P2	NM_014491|FOXP2|93986|forkhead box P2	NM_148898|FOXP2|93986|forkhead box P2	NM_148900|FOXP2|93986|forkhead box P2
hg18_v1_chr10_-_14856901_14856901	0.0104089	AGCUUAU	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr6_-_47030492_47030633	0.0100045	AGCUUAU	AY498875|GPR116|221395|G protein-coupled receptor 116	AL050295|GPR116|221395|G protein-coupled receptor 116	NM_015234|GPR116|221395|G protein-coupled receptor 116
hg18_v1_chr5_+_67620007_67620094	0.00996014	AGCUUAU	AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr14_-_69725342_69725539	0.0097272	AGCUUAU	BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3
hg18_v1_chr3_+_183993978_183993984	0.00964828	AGCUUAU	BC042180|ATP11B|23200|ATPase, class VI, type 11B	NM_014616|ATP11B|23200|ATPase, class VI, type 11B
hg18_v1_chr13_+_95541093_95541093	0.00949863	AGCUUAU	AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3	NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3
hg18_v1_chrX_+_21302317_21302541	0.00836064	AGCUUAU	NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2	NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2	NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2	NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2	AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2	AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2
hg18_v1_chr19_+_39437292_39437409	0.0076746	AGCUUAU	NM_014686|KIAA0355|9710|KIAA0355	AB002353|KIAA0355|9710|KIAA0355
hg18_v1_chr17_-_37793885_37793996	0.00726251	AGCUUAU	BC014482|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	NM_213662|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	BC000627|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	BC029783|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	AK297994|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)
hg18_v1_chr10_-_101979332_101979365	0.0061495	AGCUUAU	NM_001278|CHUK|1147|conserved helix-loop-helix ubiquitous kinase	AF080157|CHUK|1147|conserved helix-loop-helix ubiquitous kinase
hg18_v1_chr3_+_120495906_120495937	0.00588702	AGCUUAU	AB033030|ARHGAP31|57514|Rho GTPase activating protein 31	NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31
hg18_v1_chr13_+_19430906_19431025	0.00571721	AGCUUAU	AJ224901|ZMYM2|7750|zinc finger, MYM-type 2	BX647944|ZMYM2|7750|zinc finger, MYM-type 2	NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2
hg18_v1_chr7_+_7974941_7974976	0.00554002	AGCUUAU	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1	BC050291|GLCCI1|113263|glucocorticoid induced transcript 1
hg18_v1_chr10_-_7701619_7701641	0.00449783	AGCUUAU	BC004282|ITIH5|80760|inter-alpha (globulin) inhibitor H5	NM_032817|ITIH5|80760|inter-alpha (globulin) inhibitor H5
hg18_v1_chr7_-_156378636_156378718	0.00434828	AGCUUAU	NM_022458|LMBR1|64327|limb region 1 homolog (mouse)	CR622323|LMBR1|64327|limb region 1 homolog (mouse)
hg18_v1_chr16_-_20819061_20819242	0.00343076	AGCUUAU	BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
hg18_v1_chr15_+_57067141_57067157	0.0032214	AGCUUAU	BC060862|RNF111|54778|ring finger protein 111	BX538130|RNF111|54778|ring finger protein 111	NM_017610|RNF111|54778|ring finger protein 111
hg18_v1_chr4_-_103967389_103967474	0.00138164	AGCUUAU	AK095822|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181892|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
hg18_v1_chr18_-_45975163_45975578	0.000904001	AGCUUAU	AB032945|MYO5B|4645|myosin VB	AB290160|MYO5B|4645|myosin VB	BC032511|MYO5B|4645|myosin VB	NM_001080467|MYO5B|4645|myosin VB
hg18_v1_chr3_-_52688768_52688778	0.000419236	AGCUUAU	AY281068|PBRM1|55193|polybromo 1	AF177387|PBRM1|55193|polybromo 1	AF225870|PBRM1|55193|polybromo 1	AF225871|PBRM1|55193|polybromo 1	AF225872|PBRM1|55193|polybromo 1	BC115009|PBRM1|55193|polybromo 1	BC115010|PBRM1|55193|polybromo 1	BC115011|PBRM1|55193|polybromo 1	BC116450|PBRM1|55193|polybromo 1	BC129934|PBRM1|55193|polybromo 1	BC129935|PBRM1|55193|polybromo 1	NM_018165|PBRM1|55193|polybromo 1	NM_181042|PBRM1|55193|polybromo 1
