hg18_v1_chr17_+_44429748_44429911	4.09025	AGGUAGU	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg18_v1_chr20_+_36867708_36867829	2.91195	AGGUAGU	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory (inhibitor) subunit 16B
hg18_v1_chr6_-_94185780_94186028	2.34692	AGGUAGU	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg18_v1_chr2_+_231968578_231968754	2.27178	AGGUAGU	AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
hg18_v1_chr17_-_10042579_10042683	2.20619	AGGUAGU	AY327406|GAS7|8522|growth arrest-specific 7	NM_201433|GAS7|8522|growth arrest-specific 7
hg18_v1_chr16_-_87535106_87535108	2.17074	AGGUAGU	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg18_v1_chr17_-_44037332_44037355	2.06805	AGGUAGU	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg18_v1_chr6_+_105511615_105511615	1.99473	AGGUAGU	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)	DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)	NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)
hg18_v1_chr7_-_23476497_23476549	1.99401	AGGUAGU	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg18_v1_chr16_-_87570716_87571092	1.96491	AGGUAGU	EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg18_v1_chr11_-_132318080_132318369	1.80527	AGGUAGU	EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like	BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like	BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like	BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like	BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like	BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like	BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like	L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like	NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like	AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like
hg18_v1_chr4_-_41849651_41849651	1.72868	AGGUAGU	AB126828|BEND4|389206|BEN domain containing 4	AB126829|BEND4|389206|BEN domain containing 4	NM_001159547|BEND4|389206|BEN domain containing 4	NM_207406|BEND4|389206|BEN domain containing 4
hg18_v1_chr16_-_51138306_51138306	1.721	AGGUAGU	NM_001080430|TOX3|27324|TOX high mobility group box family member 3
hg18_v1_chr2_+_5750229_5750303	1.70162	AGGUAGU	U23752|SOX11|6664|SRY (sex determining region Y)-box 11	AB028641|SOX11|6664|SRY (sex determining region Y)-box 11	NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11	BC025789|SOX11|6664|SRY (sex determining region Y)-box 11
hg18_v1_chr17_-_44043361_44043381	1.62318	AGGUAGU	AK223249|HOXB7|3217|homeobox B7	M16937|HOXB7|3217|homeobox B7	NM_004502|HOXB7|3217|homeobox B7
hg18_v1_chr22_+_47263919_47263969	1.5265	AGGUAGU	NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
hg18_v1_chr16_-_51139214_51139214	1.51406	AGGUAGU	AK299202|TOX3|27324|TOX high mobility group box family member 3	NM_001146188|TOX3|27324|TOX high mobility group box family member 3
hg18_v1_chr9_-_16860719_16860813	1.50679	AGGUAGU	CR933649|BNC2|54796|basonuclin 2	AK299073|BNC2|54796|basonuclin 2	NM_017637|BNC2|54796|basonuclin 2
hg18_v1_chr20_-_604822_604822	1.48258	AGGUAGU	AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)	NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)
hg18_v1_chr2_+_198278276_198278476	1.38705	AGGUAGU	AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr2_-_50428395_50428457	1.25346	AGGUAGU	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg18_v1_chr11_-_132907499_132907612	1.22873	AGGUAGU	BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like	NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like
hg18_v1_chrX_-_99551926_99551932	1.22331	AGGUAGU	EF676096|PCDH19|57526|protocadherin 19	NM_001105243|PCDH19|57526|protocadherin 19	NM_001184880|PCDH19|57526|protocadherin 19	NM_020766|PCDH19|57526|protocadherin 19
hg18_v1_chr20_+_254205_254268	1.19288	AGGUAGU	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg18_v1_chr21_-_38955487_38955573	1.18124	AGGUAGU	AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr14_+_71469538_71469701	1.16015	AGGUAGU	NM_004296|RGS6|9628|regulator of G-protein signaling 6	AF073920|RGS6|9628|regulator of G-protein signaling 6	BC104877|RGS6|9628|regulator of G-protein signaling 6	BC113572|RGS6|9628|regulator of G-protein signaling 6	BC143699|RGS6|9628|regulator of G-protein signaling 6	AB209462|RGS6|9628|regulator of G-protein signaling 6
hg18_v1_chr13_-_101366995_101366995	1.15519	AGGUAGU	NM_004115|FGF14|2259|fibroblast growth factor 14	U66200|FGF14|2259|fibroblast growth factor 14
hg18_v1_chr18_-_22696532_22696572	1.13906	AGGUAGU	U63623|AQP4|361|aquaporin 4	NM_004028|AQP4|361|aquaporin 4
hg18_v1_chr17_-_9803490_9803503	1.07614	AGGUAGU	AJ224876|GAS7|8522|growth arrest-specific 7	NM_003644|GAS7|8522|growth arrest-specific 7	AK293834|GAS7|8522|growth arrest-specific 7	AK315162|GAS7|8522|growth arrest-specific 7
hg18_v1_chr22_+_47350781_47350870	1.07355	AGGUAGU	AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
hg18_v1_chr11_-_110088330_110088660	0.928641	AGGUAGU	AK307602|ARHGAP20|57569|Rho GTPase activating protein 20	AY496263|ARHGAP20|57569|Rho GTPase activating protein 20	AY496264|ARHGAP20|57569|Rho GTPase activating protein 20	NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20
hg18_v1_chr18_-_22699650_22699717	0.925554	AGGUAGU	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4
hg18_v1_chr11_+_63627816_63627937	0.910389	AGGUAGU	AY358308|FLRT1|23769|fibronectin leucine rich transmembrane protein 1	BC018370|FLRT1|23769|fibronectin leucine rich transmembrane protein 1	NM_013280|FLRT1|23769|fibronectin leucine rich transmembrane protein 1
hg18_v1_chrX_+_104953187_104953202	0.906186	AGGUAGU	BX538345|NRK|203447|Nik related kinase	NM_198465|NRK|203447|Nik related kinase	BC108702|NRK|203447|Nik related kinase
hg18_v1_chr1_-_205290921_205291044	0.879609	AGGUAGU	AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)
hg18_v1_chr2_-_142605739_142605739	0.877655	AGGUAGU	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg18_v1_chr15_-_53822468_53822569	0.874754	AGGUAGU	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr6_+_133604181_133604187	0.851339	AGGUAGU	AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)	NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)	NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)	NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)
hg18_v1_chr1_-_92124201_92124469	0.845628	AGGUAGU	AK225799|TGFBR3|7049|transforming growth factor, beta receptor III	NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III	NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III
hg18_v1_chr8_+_121206478_121206595	0.84231	AGGUAGU	NM_021110|COL14A1|7373|collagen, type XIV, alpha 1	Y11709|COL14A1|7373|collagen, type XIV, alpha 1	AK293080|COL14A1|7373|collagen, type XIV, alpha 1	AK307716|COL14A1|7373|collagen, type XIV, alpha 1	AK311498|COL14A1|7373|collagen, type XIV, alpha 1
hg18_v1_chr3_-_36961539_36961610	0.826269	AGGUAGU	NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1
hg18_v1_chr11_-_73856241_73856247	0.786619	AGGUAGU	CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3	DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3	NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3
hg18_v1_chr2_+_189547323_189547356	0.785634	AGGUAGU	AK308010|COL3A1|1281|collagen, type III, alpha 1	NM_000090|COL3A1|1281|collagen, type III, alpha 1	BC028178|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr19_-_52667056_52667118	0.766579	AGGUAGU	AK302552|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2	NM_015063|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2
hg18_v1_chr8_-_109165012_109165088	0.739602	AGGUAGU	AK123023|RSPO2|340419|R-spondin 2 homolog (Xenopus laevis)	NM_178565|RSPO2|340419|R-spondin 2 homolog (Xenopus laevis)
hg18_v1_chr3_+_50687675_50687698	0.738325	AGGUAGU	AY254099|DOCK3|1795|dedicator of cytokinesis 3	NM_004947|DOCK3|1795|dedicator of cytokinesis 3	AY145303|DOCK3|1795|dedicator of cytokinesis 3
hg18_v1_chr16_+_22124870_22125478	0.728586	AGGUAGU	NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase	AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase	BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase
hg18_v1_chr9_+_122890394_122890425	0.7204	AGGUAGU	NM_007018|CEP110|11064|centrosomal protein 110kDa	BC137284|CEP110|11064|centrosomal protein 110kDa	BC137286|CEP110|11064|centrosomal protein 110kDa	AF513978|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr19_-_55763091_55763113	0.708243	AGGUAGU	BC131897|LRRC4B|94030|leucine rich repeat containing 4B	NM_001080457|LRRC4B|94030|leucine rich repeat containing 4B
hg18_v1_chr15_-_63502438_63502471	0.696652	AGGUAGU	AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4	NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4
hg18_v1_chrX_-_83644054_83644142	0.678451	AGGUAGU	BC101720|HDX|139324|highly divergent homeobox	BC101722|HDX|139324|highly divergent homeobox	BC143522|HDX|139324|highly divergent homeobox	BX538112|HDX|139324|highly divergent homeobox	AK055240|HDX|139324|highly divergent homeobox	AK290050|HDX|139324|highly divergent homeobox	BX649166|HDX|139324|highly divergent homeobox	NM_001177478|HDX|139324|highly divergent homeobox	NM_001177479|HDX|139324|highly divergent homeobox	NM_144657|HDX|139324|highly divergent homeobox
hg18_v1_chr2_-_175255717_175256284	0.671866	AGGUAGU	CR618785|WIPF1|7456|WAS/WASL interacting protein family, member 1	BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1	BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1	NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg18_v1_chr15_+_77511912_77511916	0.666245	AGGUAGU	AB028947|KIAA1024|23251|KIAA1024	NM_015206|KIAA1024|23251|KIAA1024	BC152466|KIAA1024|23251|KIAA1024
hg18_v1_chr1_+_26609819_26609857	0.662981	AGGUAGU	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr2_-_51113040_51113177	0.65647	AGGUAGU	EF539882|NRXN1|9378|neurexin 1	AK124726|NRXN1|9378|neurexin 1	NM_001135659|NRXN1|9378|neurexin 1	NM_004801|NRXN1|9378|neurexin 1
hg18_v1_chr9_-_78710698_78710847	0.655669	AGGUAGU	AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)	BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)	NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)
hg18_v1_chr20_+_226200_226218	0.624433	AGGUAGU	BC069238|ZCCHC3|85364|zinc finger, CCHC domain containing 3	NM_033089|ZCCHC3|85364|zinc finger, CCHC domain containing 3	AK025768|ZCCHC3|85364|zinc finger, CCHC domain containing 3	BC107584|ZCCHC3|85364|zinc finger, CCHC domain containing 3	BC036469|ZCCHC3|85364|zinc finger, CCHC domain containing 3
hg18_v1_chr16_+_67778441_67778618	0.613449	AGGUAGU	BC031058|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	AF243385|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	NM_006750|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	U40572|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	BC048215|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	EU831451|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	EU831538|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg18_v1_chr22_+_28609064_28609194	0.585348	AGGUAGU	BC151217|MTMR3|8897|myotubularin related protein 3	AK289581|MTMR3|8897|myotubularin related protein 3	NM_021090|MTMR3|8897|myotubularin related protein 3	NM_153050|MTMR3|8897|myotubularin related protein 3	NM_153051|MTMR3|8897|myotubularin related protein 3
hg18_v1_chr7_-_45927263_45927400	0.573818	AGGUAGU	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3	DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3	DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3	DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3	BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3	BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3	M31159|IGFBP3|3486|insulin-like growth factor binding protein 3	BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3	AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3	AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3	AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3	AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3	AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3	AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3	AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3	AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3	AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3	AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3	AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3	AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3	AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3	AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3	AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3	AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3	AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3	AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3	AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3	AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3	AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3	AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3	AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3	NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3	NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3	X64875|IGFBP3|3486|insulin-like growth factor binding protein 3
hg18_v1_chr17_+_24742068_24742074	0.568094	AGGUAGU	NM_020791|TAOK1|57551|TAO kinase 1	BC133039|TAOK1|57551|TAO kinase 1	BC144067|TAOK1|57551|TAO kinase 1
hg18_v1_chr18_+_54039730_54039754	0.554741	AGGUAGU	AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr12_-_101396459_101396558	0.533365	AGGUAGU	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr5_+_148705169_148705294	0.530607	AGGUAGU	NM_152407|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)	BC036678|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)	AK294005|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)	BC070090|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)	AL832325|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)	AK074293|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr12_-_24946495_24946588	0.526937	AGGUAGU	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr12_+_60940404_60940516	0.526725	AGGUAGU	AF153604|USP15|9958|ubiquitin specific peptidase 15	AK292337|USP15|9958|ubiquitin specific peptidase 15	AK023703|USP15|9958|ubiquitin specific peptidase 15	BC063454|USP15|9958|ubiquitin specific peptidase 15	AK297759|USP15|9958|ubiquitin specific peptidase 15	BC020688|USP15|9958|ubiquitin specific peptidase 15	AF106069|USP15|9958|ubiquitin specific peptidase 15	BC125123|USP15|9958|ubiquitin specific peptidase 15	NM_006313|USP15|9958|ubiquitin specific peptidase 15	BC110908|USP15|9958|ubiquitin specific peptidase 15	CR600092|USP15|9958|ubiquitin specific peptidase 15	AB011101|USP15|9958|ubiquitin specific peptidase 15	AF013990|USP15|9958|ubiquitin specific peptidase 15
hg18_v1_chr10_+_68355797_68355845	0.4965	AGGUAGU	NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3
hg18_v1_chr12_-_24947233_24947275	0.494403	AGGUAGU	AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr2_+_26249463_26249463	0.483907	AGGUAGU	AB124552|FAM59B|150946|family with sequence similarity 59, member B	NM_001168241|FAM59B|150946|family with sequence similarity 59, member B
hg18_v1_chr13_-_101852028_101852124	0.47824	AGGUAGU	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg18_v1_chrX_+_49718954_49719016	0.473664	AGGUAGU	NM_000084|CLCN5|1184|chloride channel 5	AK308089|CLCN5|1184|chloride channel 5	AK290940|CLCN5|1184|chloride channel 5
hg18_v1_chr18_+_54013575_54013882	0.469775	AGGUAGU	NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chrX_-_24600661_24600899	0.465562	AGGUAGU	BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr18_+_53865455_53865455	0.464791	AGGUAGU	AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr16_-_30529129_30529185	0.456185	AGGUAGU	AK310459|ZNF689|115509|zinc finger protein 689	AB065282|ZNF689|115509|zinc finger protein 689	BC014000|ZNF689|115509|zinc finger protein 689	NM_138447|ZNF689|115509|zinc finger protein 689
hg18_v1_chr3_+_89239363_89239460	0.443747	AGGUAGU	AF213459|EPHA3|2042|EPH receptor A3	NM_005233|EPHA3|2042|EPH receptor A3	NM_182644|EPHA3|2042|EPH receptor A3	BC063282|EPHA3|2042|EPH receptor A3
hg18_v1_chr1_+_50286272_50286375	0.443542	AGGUAGU	AK297338|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144777|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	CR595508|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr11_+_44742551_44742551	0.43474	AGGUAGU	NM_130783|TSPAN18|90139|tetraspanin 18
hg18_v1_chr15_+_64781723_64781734	0.430218	AGGUAGU	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg18_v1_chr19_+_37528340_37528464	0.404829	AGGUAGU	NM_001136156|ZNF507|22847|zinc finger protein 507	NM_014910|ZNF507|22847|zinc finger protein 507	AK292526|ZNF507|22847|zinc finger protein 507	AB029007|ZNF507|22847|zinc finger protein 507	BX640881|ZNF507|22847|zinc finger protein 507	BC136417|ZNF507|22847|zinc finger protein 507	AL713775|ZNF507|22847|zinc finger protein 507
hg18_v1_chr1_-_86394695_86394708	0.404429	AGGUAGU	BC116180|COL24A1|255631|collagen, type XXIV, alpha 1	BC113654|COL24A1|255631|collagen, type XXIV, alpha 1	BC117170|COL24A1|255631|collagen, type XXIV, alpha 1	BC143715|COL24A1|255631|collagen, type XXIV, alpha 1	BC143717|COL24A1|255631|collagen, type XXIV, alpha 1	BC143718|COL24A1|255631|collagen, type XXIV, alpha 1	AY244357|COL24A1|255631|collagen, type XXIV, alpha 1	NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1
hg18_v1_chr5_-_158459276_158459365	0.40218	AGGUAGU	BC041178|EBF1|1879|early B-cell factor 1	AK289712|EBF1|1879|early B-cell factor 1	BC038805|EBF1|1879|early B-cell factor 1	NM_024007|EBF1|1879|early B-cell factor 1
hg18_v1_chr18_+_6824431_6824499	0.38034	AGGUAGU	NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28	BX648684|ARHGAP28|79822|Rho GTPase activating protein 28	AK308259|ARHGAP28|79822|Rho GTPase activating protein 28	AK302026|ARHGAP28|79822|Rho GTPase activating protein 28
hg18_v1_chr14_+_57736550_57736703	0.375984	AGGUAGU	CR626759|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	NM_018477|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR608130|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR600466|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	AK000544|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	AF220190|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR601293|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR616561|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR605561|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR606184|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR614724|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR623992|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	AK222624|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	AK222702|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	BC005208|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR602344|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	AK022534|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR613415|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR599113|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	AK315537|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR613652|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR621866|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR592445|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR595382|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	BC011997|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	DQ891294|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	DQ894478|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	BX248282|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	CR621042|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)
hg18_v1_chr1_-_92144146_92144146	0.363683	AGGUAGU	L07594|TGFBR3|7049|transforming growth factor, beta receptor III	NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III
hg18_v1_chr21_-_45046090_45046198	0.360232	AGGUAGU	BT006914|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	AF032456|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	BC008351|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	BC054341|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	BC001738|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	BC011569|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	NM_003343|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	NM_182688|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)	AK290629|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)
hg18_v1_chr1_+_18830086_18830086	0.359236	AGGUAGU	NM_001135254|PAX7|5081|paired box 7	NM_002584|PAX7|5081|paired box 7	NM_013945|PAX7|5081|paired box 7	X96743|PAX7|5081|paired box 7
hg18_v1_chrX_-_74062005_74062044	0.354563	AGGUAGU	AK307471|KIAA2022|340533|KIAA2022	NM_001008537|KIAA2022|340533|KIAA2022	AB095942|KIAA2022|340533|KIAA2022	BC152557|KIAA2022|340533|KIAA2022
hg18_v1_chr8_-_145530639_145530750	0.353161	AGGUAGU	AY014996|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)	NM_031309|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)
hg18_v1_chr10_+_97793054_97793689	0.349034	AGGUAGU	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr3_+_85090721_85090917	0.345375	AGGUAGU	BC105999|CADM2|253559|cell adhesion molecule 2	NM_001167674|CADM2|253559|cell adhesion molecule 2	NM_001167675|CADM2|253559|cell adhesion molecule 2	AK295885|CADM2|253559|cell adhesion molecule 2	AL834270|CADM2|253559|cell adhesion molecule 2
hg18_v1_chr9_+_4652285_4652337	0.342318	AGGUAGU	BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2
hg18_v1_chrX_-_23955223_23955223	0.335416	AGGUAGU	AK057298|KLHL15|80311|kelch-like 15 (Drosophila)	NM_030624|KLHL15|80311|kelch-like 15 (Drosophila)
hg18_v1_chr1_-_177378801_177378846	0.331488	AGGUAGU	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chr20_-_30534848_30535004	0.326546	AGGUAGU	AK056286|C20orf112|140688|chromosome 20 open reading frame 112	NM_080616|C20orf112|140688|chromosome 20 open reading frame 112	CR621375|C20orf112|140688|chromosome 20 open reading frame 112
hg18_v1_chr17_-_9870292_9870400	0.326489	AGGUAGU	AB007854|GAS7|8522|growth arrest-specific 7	AK225165|GAS7|8522|growth arrest-specific 7	AK299574|GAS7|8522|growth arrest-specific 7	NM_001130831|GAS7|8522|growth arrest-specific 7
hg18_v1_chr11_-_787955_788020	0.325949	AGGUAGU	AK290481|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22	NM_001191060|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg18_v1_chr4_-_123092358_123092358	0.325153	AGGUAGU	AY865574|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	NM_001130698|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3
hg18_v1_chr10_-_108914277_108914455	0.322942	AGGUAGU	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg18_v1_chr9_-_110922030_110922052	0.30932	AGGUAGU	AF153415|C9orf5|23731|chromosome 9 open reading frame 5	NM_032012|C9orf5|23731|chromosome 9 open reading frame 5
hg18_v1_chrX_-_77037563_77037745	0.309055	AGGUAGU	EU831642|MAGT1|84061|magnesium transporter 1	EU831726|MAGT1|84061|magnesium transporter 1	BC041014|MAGT1|84061|magnesium transporter 1	AY358691|MAGT1|84061|magnesium transporter 1	BC060842|MAGT1|84061|magnesium transporter 1	AK075394|MAGT1|84061|magnesium transporter 1	AK223131|MAGT1|84061|magnesium transporter 1	AK296743|MAGT1|84061|magnesium transporter 1	AK314309|MAGT1|84061|magnesium transporter 1	AL136636|MAGT1|84061|magnesium transporter 1	DQ000004|MAGT1|84061|magnesium transporter 1	BC050657|MAGT1|84061|magnesium transporter 1	BC063037|MAGT1|84061|magnesium transporter 1	AK172735|MAGT1|84061|magnesium transporter 1	NM_032121|MAGT1|84061|magnesium transporter 1	AK294943|MAGT1|84061|magnesium transporter 1
hg18_v1_chr12_-_24993548_24993659	0.302639	AGGUAGU	AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr11_-_786175_786315	0.295011	AGGUAGU	BC023545|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22	AK311038|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22	NM_024698|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg18_v1_chr12_-_57599571_57599593	0.291478	AGGUAGU	AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg18_v1_chr3_-_121445831_121445831	0.284743	AGGUAGU	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg18_v1_chr7_-_11838260_11838369	0.281367	AGGUAGU	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr10_+_11246934_11247016	0.279815	AGGUAGU	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr22_+_38183262_38183271	0.278036	AGGUAGU	NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg18_v1_chr15_+_64787983_64787983	0.273305	AGGUAGU	NM_001142861|SMAD6|4091|SMAD family member 6	U59914|SMAD6|4091|SMAD family member 6
hg18_v1_chr9_+_115023628_115023683	0.269339	AGGUAGU	CR605076|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	NM_001859|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	CR593760|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	U83460|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1	AK292511|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1
hg18_v1_chr8_-_82916982_82917075	0.264931	AGGUAGU	AL833763|SNX16|64089|sorting nexin 16	BC033630|SNX16|64089|sorting nexin 16	AK290903|SNX16|64089|sorting nexin 16	NM_022133|SNX16|64089|sorting nexin 16	NM_152836|SNX16|64089|sorting nexin 16	NM_152837|SNX16|64089|sorting nexin 16
hg18_v1_chr14_-_87529600_87529659	0.26452	AGGUAGU	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr1_+_178190493_178190563	0.262864	AGGUAGU	AK095601|CEP350|9857|centrosomal protein 350kDa	NM_014810|CEP350|9857|centrosomal protein 350kDa
hg18_v1_chr9_+_132579088_132579193	0.253812	AGGUAGU	NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr10_-_38186227_38186621	0.239604	AGGUAGU	BC132915|ZNF248|57209|zinc finger protein 248	BC132917|ZNF248|57209|zinc finger protein 248	BC110869|ZNF248|57209|zinc finger protein 248	BC021819|ZNF248|57209|zinc finger protein 248	AJ491695|ZNF248|57209|zinc finger protein 248	AJ492196|ZNF248|57209|zinc finger protein 248	NM_021045|ZNF248|57209|zinc finger protein 248
hg18_v1_chr10_-_94040779_94040854	0.239359	AGGUAGU	BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg18_v1_chr3_+_160269734_160269828	0.235328	AGGUAGU	NM_001042705|IQCJ|654502|IQ motif containing J	NM_001042706|IQCJ|654502|IQ motif containing J	NM_001197100|IQCJ|654502|IQ motif containing J	NM_001197113|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough	NM_001197114|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough	AK309049|IQCJ|654502|IQ motif containing J	DQ309553|IQCJ|654502|IQ motif containing J	DQ309554|IQCJ|654502|IQ motif containing J	AK096479|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough
hg18_v1_chr21_-_27261276_27261344	0.230703	AGGUAGU	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg18_v1_chr12_+_12761085_12761702	0.226648	AGGUAGU	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg18_v1_chrX_+_49573952_49574021	0.226568	AGGUAGU	AK092049|CLCN5|1184|chloride channel 5	NM_001127898|CLCN5|1184|chloride channel 5	NM_001127899|CLCN5|1184|chloride channel 5	AK056560|CLCN5|1184|chloride channel 5
hg18_v1_chr2_-_175207521_175207565	0.222222	AGGUAGU	AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1	NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1	AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1	AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1
hg18_v1_chrX_-_134013644_134013946	0.220177	AGGUAGU	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	CR601523|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg18_v1_chr5_-_131160614_131160654	0.207981	AGGUAGU	NM_001008738|FNIP1|96459|folliculin interacting protein 1	NM_133372|FNIP1|96459|folliculin interacting protein 1
hg18_v1_chr5_-_153838013_153838018	0.204885	AGGUAGU	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1	NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1
hg18_v1_chr5_-_35266550_35266550	0.198838	AGGUAGU	NM_000949|PRLR|5618|prolactin receptor
hg18_v1_chr14_+_50776635_50776763	0.198811	AGGUAGU	NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1	AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1	BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1	BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1	BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1	AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1	BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1	AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1	AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1	BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1	AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1	AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1	DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1	DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1
hg18_v1_chr15_+_36332258_36332370	0.186679	AGGUAGU	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1	AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr12_-_101398503_101398521	0.185792	AGGUAGU	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr11_-_6459139_6459251	0.185585	AGGUAGU	AK300855|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	CR597929|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	AK304512|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	NM_012402|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	AK301856|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	AK301972|ARFIP2|23647|ADP-ribosylation factor interacting protein 2
hg18_v1_chr17_+_50697319_50697343	0.183007	AGGUAGU	NM_002126|HLF|3131|hepatic leukemia factor
hg18_v1_chr7_+_17304707_17304882	0.181049	AGGUAGU	AK307495|AHR|196|aryl hydrocarbon receptor	NM_001621|AHR|196|aryl hydrocarbon receptor	D16354|AHR|196|aryl hydrocarbon receptor	BC070080|AHR|196|aryl hydrocarbon receptor
hg18_v1_chr12_-_104002348_104002542	0.18094	AGGUAGU	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg18_v1_chr2_-_48836313_48836383	0.174649	AGGUAGU	S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor	M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor	M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor	AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor	NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor
hg18_v1_chr2_+_32244406_32244461	0.173404	AGGUAGU	NM_001193513|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_001193514|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_001193515|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	NM_017964|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK055663|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK096672|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK127716|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AK304225|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	BC066903|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	EF560719|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	EF560726|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AL832755|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6	AF173387|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6
hg18_v1_chr9_+_109085337_109085370	0.170896	AGGUAGU	AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg18_v1_chr9_-_139316523_139316559	0.170681	AGGUAGU	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein	NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein
hg18_v1_chr4_-_17632456_17632672	0.16939	AGGUAGU	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like	BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like	AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like	NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like	NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like
hg18_v1_chr1_+_213323182_213323284	0.168399	AGGUAGU	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2	NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2	AK294780|KCNK2|3776|potassium channel, subfamily K, member 2	AK291483|KCNK2|3776|potassium channel, subfamily K, member 2	BC143586|KCNK2|3776|potassium channel, subfamily K, member 2	BC101693|KCNK2|3776|potassium channel, subfamily K, member 2	BC101695|KCNK2|3776|potassium channel, subfamily K, member 2	AF004711|KCNK2|3776|potassium channel, subfamily K, member 2	EF165334|KCNK2|3776|potassium channel, subfamily K, member 2	AF171068|KCNK2|3776|potassium channel, subfamily K, member 2	BC069462|KCNK2|3776|potassium channel, subfamily K, member 2	EF165335|KCNK2|3776|potassium channel, subfamily K, member 2
hg18_v1_chr1_+_50347176_50347181	0.16824	AGGUAGU	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr6_+_32713160_32713282	0.166951	AGGUAGU	AK130811|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	AK313975|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	NM_002122|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	BC073977|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	BC051832|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	AB209628|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	X00452|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	AF522250|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	L46875|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	U77589|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	M34996|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	M20431|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	L34082|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	L34083|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	L34084|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	L34085|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	M59802|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1
hg18_v1_chr2_+_108702338_108702402	0.164092	AGGUAGU	D42063|RANBP2|5903|RAN binding protein 2	NM_006267|RANBP2|5903|RAN binding protein 2
hg18_v1_chr16_-_66397965_66398055	0.160835	AGGUAGU	BC121176|RANBP10|57610|RAN binding protein 10	BC121177|RANBP10|57610|RAN binding protein 10	AY337313|RANBP10|57610|RAN binding protein 10	NM_020850|RANBP10|57610|RAN binding protein 10
hg18_v1_chr1_+_50344550_50344550	0.160196	AGGUAGU	AY033996|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144775|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr2_-_144711375_144711375	0.159452	AGGUAGU	NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1
hg18_v1_chr5_-_55326358_55326682	0.15801	AGGUAGU	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)	M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)	NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)	NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)	NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)
hg18_v1_chr8_-_87824996_87825060	0.157489	AGGUAGU	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3	AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3	NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3
hg18_v1_chr9_-_134809816_134809844	0.157304	AGGUAGU	AK303030|TSC1|7248|tuberous sclerosis 1	AK308412|TSC1|7248|tuberous sclerosis 1	AK297326|TSC1|7248|tuberous sclerosis 1	AF013168|TSC1|7248|tuberous sclerosis 1	BC108668|TSC1|7248|tuberous sclerosis 1	AK299654|TSC1|7248|tuberous sclerosis 1	BC070032|TSC1|7248|tuberous sclerosis 1	NM_000368|TSC1|7248|tuberous sclerosis 1	NM_001162426|TSC1|7248|tuberous sclerosis 1	NM_001162427|TSC1|7248|tuberous sclerosis 1
hg18_v1_chr11_-_788196_788347	0.157065	AGGUAGU	BC019033|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22	NM_001191061|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg18_v1_chr12_-_57600336_57600553	0.153397	AGGUAGU	AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg18_v1_chrX_-_123925343_123925346	0.150864	AGGUAGU	BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)	NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1(Drosophila)
hg18_v1_chr17_+_18159294_18159328	0.149271	AGGUAGU	NM_144775|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8
hg18_v1_chrX_+_47581225_47581257	0.146645	AGGUAGU	AK126949|ZNF81|347344|zinc finger protein 81	NM_007137|ZNF81|347344|zinc finger protein 81
hg18_v1_chr3_+_49183983_49184100	0.143834	AGGUAGU	NM_173546|KLHDC8B|200942|kelch domain containing 8B	AK294160|KLHDC8B|200942|kelch domain containing 8B	AY129011|KLHDC8B|200942|kelch domain containing 8B	BC039083|KLHDC8B|200942|kelch domain containing 8B
hg18_v1_chr1_+_50342168_50342168	0.142471	AGGUAGU	AY033995|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001144776|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr9_+_19398924_19399082	0.142434	AGGUAGU	AK123581|ACER2|340485|alkaline ceramidase 2	NM_001010887|ACER2|340485|alkaline ceramidase 2	BC092487|ACER2|340485|alkaline ceramidase 2	AY312516|ACER2|340485|alkaline ceramidase 2
hg18_v1_chr8_+_59069522_59069900	0.139775	AGGUAGU	AK092221|FAM110B|90362|family with sequence similarity 110, member B	NM_147189|FAM110B|90362|family with sequence similarity 110, member B
hg18_v1_chr14_-_67232172_67232262	0.137968	AGGUAGU	CR457180|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR623193|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	BC011727|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	BC000112|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR611069|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR616199|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR590973|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR626485|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR602441|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AK289427|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	BC026274|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	DQ426886|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AK057195|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AK293355|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	BC051291|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AF151840|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AF167438|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AF395068|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR608390|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR613307|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	CR614910|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AK307500|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AK314465|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	BC037302|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	AK074749|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	NM_016026|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
hg18_v1_chr9_+_6403139_6403150	0.135142	AGGUAGU	BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2
hg18_v1_chr3_+_102980718_102980759	0.13385	AGGUAGU	NM_145037|FAM55C|91775|family with sequence similarity 55, member C
hg18_v1_chr14_+_89933055_89933098	0.13337	AGGUAGU	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chr1_+_151498802_151498802	0.132496	AGGUAGU	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg18_v1_chr12_-_56527013_56527013	0.130992	AGGUAGU	NM_005730|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg18_v1_chr22_+_38213174_38213298	0.129316	AGGUAGU	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg18_v1_chr6_+_4781330_4781330	0.124189	AGGUAGU	AK296985|CDYL|9425|chromodomain protein, Y-like	NM_001143970|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr16_-_52295214_52295303	0.123224	AGGUAGU	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg18_v1_chr11_+_7229717_7229822	0.121959	AGGUAGU	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg18_v1_chr20_-_5539487_5539688	0.121729	AGGUAGU	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg18_v1_chr3_+_185580554_185580914	0.119269	AGGUAGU	AF209928|CHRD|8646|chordin	AF209929|CHRD|8646|chordin	AF209930|CHRD|8646|chordin	AF283325|CHRD|8646|chordin	NM_003741|CHRD|8646|chordin	AY358926|CHRD|8646|chordin	BC112345|CHRD|8646|chordin	AB208947|CHRD|8646|chordin	AK074147|CHRD|8646|chordin	AK293456|CHRD|8646|chordin	AK295632|CHRD|8646|chordin
hg18_v1_chr13_-_32757835_32757900	0.116912	AGGUAGU	AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chrX_-_24575375_24575386	0.112597	AGGUAGU	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr4_-_23500706_23500797	0.112515	AGGUAGU	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg18_v1_chr7_+_149699185_149699263	0.111222	AGGUAGU	AK226081|REPIN1|29803|replication initiator 1	AJ245553|REPIN1|29803|replication initiator 1	NM_014374|REPIN1|29803|replication initiator 1	BC000363|REPIN1|29803|replication initiator 1	BC001760|REPIN1|29803|replication initiator 1	EU446796|REPIN1|29803|replication initiator 1
hg18_v1_chr7_+_113842284_113842382	0.1111	AGGUAGU	AY144615|FOXP2|93986|forkhead box P2	BC018016|FOXP2|93986|forkhead box P2	NM_001172766|FOXP2|93986|forkhead box P2	NM_014491|FOXP2|93986|forkhead box P2	NM_148898|FOXP2|93986|forkhead box P2	NM_148900|FOXP2|93986|forkhead box P2
hg18_v1_chr20_-_32163743_32163749	0.111088	AGGUAGU	NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
hg18_v1_chr6_-_84475827_84475845	0.108342	AGGUAGU	BC036650|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)	BC060818|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)	NM_014841|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)
hg18_v1_chr14_+_32478209_32478273	0.107709	AGGUAGU	AF164438|NPAS3|64067|neuronal PAS domain protein 3	AY157302|NPAS3|64067|neuronal PAS domain protein 3	NM_001164749|NPAS3|64067|neuronal PAS domain protein 3	NM_001165893|NPAS3|64067|neuronal PAS domain protein 3	NM_022123|NPAS3|64067|neuronal PAS domain protein 3	NM_173159|NPAS3|64067|neuronal PAS domain protein 3	AB054575|NPAS3|64067|neuronal PAS domain protein 3	AB054576|NPAS3|64067|neuronal PAS domain protein 3	AB055962|NPAS3|64067|neuronal PAS domain protein 3
hg18_v1_chr7_+_7188667_7188878	0.106873	AGGUAGU	NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg18_v1_chr1_-_103346639_103346640	0.105617	AGGUAGU	NM_001190709|COL11A1|1301|collagen, type XI, alpha 1	NM_001854|COL11A1|1301|collagen, type XI, alpha 1	NM_080629|COL11A1|1301|collagen, type XI, alpha 1	NM_080630|COL11A1|1301|collagen, type XI, alpha 1
hg18_v1_chr16_-_3225070_3225189	0.10346	AGGUAGU	AK315036|ZNF200|7752|zinc finger protein 200	BC032575|ZNF200|7752|zinc finger protein 200	AF060866|ZNF200|7752|zinc finger protein 200	BC025293|ZNF200|7752|zinc finger protein 200	BC012909|ZNF200|7752|zinc finger protein 200	CR609782|ZNF200|7752|zinc finger protein 200	AK056010|ZNF200|7752|zinc finger protein 200	NM_001145447|ZNF200|7752|zinc finger protein 200	NM_003454|ZNF200|7752|zinc finger protein 200
hg18_v1_chr17_-_59204685_59204819	0.102091	AGGUAGU	AK225813|CCDC47|57003|coiled-coil domain containing 47	NM_020198|CCDC47|57003|coiled-coil domain containing 47
hg18_v1_chr8_+_92151599_92151781	0.0983203	AGGUAGU	NM_016023|OTUD6B|51633|OTU domain containing 6B	BX647772|OTUD6B|51633|OTU domain containing 6B	AK293843|OTUD6B|51633|OTU domain containing 6B	BC029760|OTUD6B|51633|OTU domain containing 6B	AK310823|OTUD6B|51633|OTU domain containing 6B	AK291646|OTUD6B|51633|OTU domain containing 6B	AF151836|OTUD6B|51633|OTU domain containing 6B
hg18_v1_chr3_-_53356573_53356693	0.0957241	AGGUAGU	DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	CR602138|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	CR625787|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)
hg18_v1_chr12_+_122434561_122434656	0.0940362	AGGUAGU	AK292645|SETD8|387893|SET domain containing (lysine methyltransferase) 8	NM_020382|SETD8|387893|SET domain containing (lysine methyltransferase) 8
hg18_v1_chr4_-_90978469_90978469	0.0930033	AGGUAGU	CR602374|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)
hg18_v1_chr7_+_30034467_30034586	0.0928192	AGGUAGU	NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	CR598838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
hg18_v1_chrX_-_140098959_140098975	0.092651	AGGUAGU	AB019527|LDOC1|23641|leucine zipper, down-regulated in cancer 1	NM_012317|LDOC1|23641|leucine zipper, down-regulated in cancer 1
hg18_v1_chr8_+_22158563_22158588	0.0926201	AGGUAGU	NM_001722|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
hg18_v1_chr9_-_76757555_76757634	0.0910551	AGGUAGU	BC039588|C9orf40|55071|chromosome 9 open reading frame 40	AK225349|C9orf40|55071|chromosome 9 open reading frame 40	AK000972|C9orf40|55071|chromosome 9 open reading frame 40	NM_017998|C9orf40|55071|chromosome 9 open reading frame 40	CR599227|C9orf40|55071|chromosome 9 open reading frame 40
hg18_v1_chr20_+_31541565_31541700	0.0891042	AGGUAGU	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr3_+_197780105_197780153	0.0886889	AGGUAGU	NM_001105573|FBXO45|200933|F-box protein 45
hg18_v1_chr1_+_100776280_100776315	0.0875576	AGGUAGU	AB042410|GPR88|54112|G protein-coupled receptor 88	BC036775|GPR88|54112|G protein-coupled receptor 88	NM_022049|GPR88|54112|G protein-coupled receptor 88
hg18_v1_chr6_+_134315940_134316136	0.0872008	AGGUAGU	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	CR593032|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1	CR596561|TBPL1|9519|TBP-like 1
hg18_v1_chr4_-_90977149_90977372	0.0829317	AGGUAGU	NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	CR622483|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)
hg18_v1_chr1_+_91739241_91739297	0.0802774	AGGUAGU	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)
hg18_v1_chr7_-_83662152_83662365	0.0775492	AGGUAGU	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg18_v1_chr12_-_55758840_55758848	0.0766042	AGGUAGU	NM_001130963|TMEM194A|23306|transmembrane protein 194A	NM_015257|TMEM194A|23306|transmembrane protein 194A
hg18_v1_chr12_-_55686466_55686571	0.0759411	AGGUAGU	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39	BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39	AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39	BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39	AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39	NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39
hg18_v1_chr12_+_12656022_12656102	0.0757175	AGGUAGU	BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2	AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2	NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2	AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2	CR601775|CREBL2|1389|cAMP responsive element binding protein-like 2
hg18_v1_chr21_+_16024241_16024583	0.0732254	AGGUAGU	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr6_+_34314545_34314545	0.0710399	AGGUAGU	BC015789|HMGA1|3159|high mobility group AT-hook 1	NM_145905|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chrX_+_17563333_17563333	0.0709764	AGGUAGU	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg18_v1_chr15_-_38387410_38387465	0.0706329	AGGUAGU	AK291657|PLCB2|5330|phospholipase C, beta 2	NM_004573|PLCB2|5330|phospholipase C, beta 2
hg18_v1_chr3_-_53055078_53055128	0.0704201	AGGUAGU	AK313965|SFMBT1|51460|Scm-like with four mbt domains 1	NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1	NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1
hg18_v1_chr2_+_26257088_26257088	0.0693057	AGGUAGU	AK090454|FAM59B|150946|family with sequence similarity 59, member B	NM_001191033|FAM59B|150946|family with sequence similarity 59, member B
hg18_v1_chr3_+_38470782_38470813	0.0673034	AGGUAGU	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg18_v1_chr16_-_29929801_29929901	0.0666158	AGGUAGU	CR592793|DOC2A|8448|double C2-like domains, alpha	CR612455|DOC2A|8448|double C2-like domains, alpha	AK293651|DOC2A|8448|double C2-like domains, alpha	BC055284|DOC2A|8448|double C2-like domains, alpha	NM_003586|DOC2A|8448|double C2-like domains, alpha
hg18_v1_chrX_+_48440068_48440076	0.0664252	AGGUAGU	AF019968|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)	NM_003173|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)	BC006238|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)
hg18_v1_chr16_-_73198515_73198542	0.0663356	AGGUAGU	NM_001145666|GLG1|2734|golgi glycoprotein 1	NM_001145667|GLG1|2734|golgi glycoprotein 1	NM_012201|GLG1|2734|golgi glycoprotein 1
hg18_v1_chr1_+_99502435_99502641	0.0661826	AGGUAGU	AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4
hg18_v1_chr10_+_1092741_1092797	0.0652218	AGGUAGU	NM_014023|WDR37|22884|WD repeat domain 37	AK307259|WDR37|22884|WD repeat domain 37	AL136827|WDR37|22884|WD repeat domain 37
hg18_v1_chr6_-_86407875_86407887	0.0651784	AGGUAGU	AY034481|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034482|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034483|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159675|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159676|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein
hg18_v1_chr10_+_76541351_76541495	0.0629545	AGGUAGU	BC080593|SAMD8|142891|sterile alpha motif domain containing 8	NM_001174156|SAMD8|142891|sterile alpha motif domain containing 8	NM_144660|SAMD8|142891|sterile alpha motif domain containing 8	AK057811|SAMD8|142891|sterile alpha motif domain containing 8
hg18_v1_chr9_-_124733599_124733615	0.06266	AGGUAGU	BC018748|ZBTB26|57684|zinc finger and BTB domain containing 26	NM_020924|ZBTB26|57684|zinc finger and BTB domain containing 26
hg18_v1_chr3_+_102980975_102980975	0.0624564	AGGUAGU	AK289689|FAM55C|91775|family with sequence similarity 55, member C	NM_001134456|FAM55C|91775|family with sequence similarity 55, member C
hg18_v1_chr20_+_43943254_43943287	0.0603789	AGGUAGU	NM_080603|ZSWIM1|90204|zinc finger, SWIM-type containing 1	AK291304|ZSWIM1|90204|zinc finger, SWIM-type containing 1	BC001672|ZSWIM1|90204|zinc finger, SWIM-type containing 1	BC080525|ZSWIM1|90204|zinc finger, SWIM-type containing 1
hg18_v1_chr20_-_44468660_44468753	0.0594637	AGGUAGU	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg18_v1_chr17_-_68740077_68740131	0.059317	AGGUAGU	AK304556|FAM104A|84923|family with sequence similarity 104, member A	NM_001098832|FAM104A|84923|family with sequence similarity 104, member A	NM_032837|FAM104A|84923|family with sequence similarity 104, member A
hg18_v1_chr12_-_75983329_75983512	0.0583652	AGGUAGU	BC136366|E2F7|144455|E2F transcription factor 7	BC136367|E2F7|144455|E2F transcription factor 7	CR606651|E2F7|144455|E2F transcription factor 7	BC017481|E2F7|144455|E2F transcription factor 7	NM_203394|E2F7|144455|E2F transcription factor 7
hg18_v1_chrX_+_2756810_2756995	0.0581519	AGGUAGU	NM_001079855|GYG2|8908|glycogenin 2	NM_001184702|GYG2|8908|glycogenin 2	NM_001184703|GYG2|8908|glycogenin 2	NM_001184704|GYG2|8908|glycogenin 2	NM_003918|GYG2|8908|glycogenin 2	U94362|GYG2|8908|glycogenin 2	AK098046|GYG2|8908|glycogenin 2	AK292496|GYG2|8908|glycogenin 2	U94363|GYG2|8908|glycogenin 2	BC023152|GYG2|8908|glycogenin 2
hg18_v1_chr2_-_39517633_39517794	0.0557076	AGGUAGU	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr11_+_111450177_111450273	0.0524239	AGGUAGU	NM_001082969|C11orf57|55216|chromosome 11 open reading frame 57	NM_001082970|C11orf57|55216|chromosome 11 open reading frame 57	NM_018195|C11orf57|55216|chromosome 11 open reading frame 57	BX538107|C11orf57|55216|chromosome 11 open reading frame 57	AK125340|C11orf57|55216|chromosome 11 open reading frame 57	AK094203|C11orf57|55216|chromosome 11 open reading frame 57	BC048133|C11orf57|55216|chromosome 11 open reading frame 57	BC072455|C11orf57|55216|chromosome 11 open reading frame 57	AB096251|C11orf57|55216|chromosome 11 open reading frame 57
hg18_v1_chr6_+_4721640_4721678	0.050373	AGGUAGU	AK291601|CDYL|9425|chromodomain protein, Y-like	BC108725|CDYL|9425|chromodomain protein, Y-like	NM_004824|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr2_+_207338356_207338356	0.0503399	AGGUAGU	NM_001136193|FASTKD2|22868|FAST kinase domains 2	NM_001136194|FASTKD2|22868|FAST kinase domains 2	NM_014929|FASTKD2|22868|FAST kinase domains 2
hg18_v1_chr15_+_68971835_68972224	0.0490487	AGGUAGU	BC026157|LRRC49|54839|leucine rich repeat containing 49	NM_001199017|LRRC49|54839|leucine rich repeat containing 49	NM_017691|LRRC49|54839|leucine rich repeat containing 49	AK225137|LRRC49|54839|leucine rich repeat containing 49	AK000163|LRRC49|54839|leucine rich repeat containing 49	NM_001199018|LRRC49|54839|leucine rich repeat containing 49	BC037982|LRRC49|54839|leucine rich repeat containing 49	AK295547|LRRC49|54839|leucine rich repeat containing 49	AK301971|LRRC49|54839|leucine rich repeat containing 49	CR609201|LRRC49|54839|leucine rich repeat containing 49
hg18_v1_chr11_-_77577288_77577321	0.0486867	AGGUAGU	AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21	BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21	NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21	AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21
hg18_v1_chr17_-_57497380_57497438	0.0478229	AGGUAGU	BC140891|MED13|9969|mediator complex subunit 13	AF117754|MED13|9969|mediator complex subunit 13	NM_005121|MED13|9969|mediator complex subunit 13
hg18_v1_chr3_-_126576693_126576887	0.046119	AGGUAGU	AF039019|ZNF148|7707|zinc finger protein 148	AL833616|ZNF148|7707|zinc finger protein 148	AF432210|ZNF148|7707|zinc finger protein 148	AJ236885|ZNF148|7707|zinc finger protein 148	L04282|ZNF148|7707|zinc finger protein 148	BC035591|ZNF148|7707|zinc finger protein 148	BC018971|ZNF148|7707|zinc finger protein 148	AK314203|ZNF148|7707|zinc finger protein 148	BC050260|ZNF148|7707|zinc finger protein 148	NM_021964|ZNF148|7707|zinc finger protein 148
hg18_v1_chr1_+_91738953_91739061	0.0423276	AGGUAGU	NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)
hg18_v1_chr12_-_68291208_68291208	0.037964	AGGUAGU	BC090881|LRRC10|376132|leucine rich repeat containing 10	NM_201550|LRRC10|376132|leucine rich repeat containing 10
hg18_v1_chr17_+_8154864_8154884	0.0374726	AGGUAGU	AK300327|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	NM_025014|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AB020722|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg18_v1_chr16_-_22293097_22293496	0.0353866	AGGUAGU	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg18_v1_chr4_-_47534815_47534879	0.035303	AGGUAGU	AF133845|CORIN|10699|corin, serine peptidase	BC110451|CORIN|10699|corin, serine peptidase	NM_006587|CORIN|10699|corin, serine peptidase	AK297675|CORIN|10699|corin, serine peptidase	AK304038|CORIN|10699|corin, serine peptidase	AK304466|CORIN|10699|corin, serine peptidase	BX648285|CORIN|10699|corin, serine peptidase
hg18_v1_chr4_+_106287391_106287528	0.0345528	AGGUAGU	NM_001127208|TET2|54790|tet oncogene family member 2	NM_017628|TET2|54790|tet oncogene family member 2	AK055149|TET2|54790|tet oncogene family member 2	BC150180|TET2|54790|tet oncogene family member 2	BC150201|TET2|54790|tet oncogene family member 2
hg18_v1_chr1_+_35795976_35796053	0.0332239	AGGUAGU	NM_001014839|NCDN|23154|neurochondrin	NM_001014841|NCDN|23154|neurochondrin	NM_014284|NCDN|23154|neurochondrin	AB018739|NCDN|23154|neurochondrin	AB018740|NCDN|23154|neurochondrin	BC024592|NCDN|23154|neurochondrin	AB011179|NCDN|23154|neurochondrin
hg18_v1_chr14_-_94693418_94693672	0.0321295	AGGUAGU	BC046934|DICER1|23405|dicer 1, ribonuclease type III	AB023145|DICER1|23405|dicer 1, ribonuclease type III	BC150287|DICER1|23405|dicer 1, ribonuclease type III	NM_177438|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr1_+_4614964_4614964	0.0319906	AGGUAGU	AY282806|AJAP1|55966|adherens junctions associated protein 1	NM_001042478|AJAP1|55966|adherens junctions associated protein 1	NM_018836|AJAP1|55966|adherens junctions associated protein 1
hg18_v1_chrX_+_100361588_100361750	0.0308297	AGGUAGU	NM_001171184|DRP2|1821|dystrophin related protein 2	NM_001939|DRP2|1821|dystrophin related protein 2	AB209305|DRP2|1821|dystrophin related protein 2	BC036095|DRP2|1821|dystrophin related protein 2	U43519|DRP2|1821|dystrophin related protein 2	AK289825|DRP2|1821|dystrophin related protein 2	AK295843|DRP2|1821|dystrophin related protein 2	BC111695|DRP2|1821|dystrophin related protein 2
hg18_v1_chr2_-_25048276_25048466	0.0295412	AGGUAGU	AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27
hg18_v1_chr9_-_94206648_94206801	0.0284647	AGGUAGU	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	CR614070|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg18_v1_chr11_+_63337498_63337548	0.0272386	AGGUAGU	BC056402|C11orf84|144097|chromosome 11 open reading frame 84	NM_138471|C11orf84|144097|chromosome 11 open reading frame 84	CR602254|C11orf84|144097|chromosome 11 open reading frame 84	CR597472|C11orf84|144097|chromosome 11 open reading frame 84
hg18_v1_chr17_-_7086466_7086508	0.0268872	AGGUAGU	AK312205|GABARAP|11337|GABA(A) receptor-associated protein	AB030711|GABARAP|11337|GABA(A) receptor-associated protein	AF183425|GABARAP|11337|GABA(A) receptor-associated protein	AF067171|GABARAP|11337|GABA(A) receptor-associated protein	NM_007278|GABARAP|11337|GABA(A) receptor-associated protein	AK098634|GABARAP|11337|GABA(A) receptor-associated protein
hg18_v1_chr4_+_55907138_55907208	0.0260436	AGGUAGU	CR613723|SRD5A3|79644|steroid 5 alpha-reductase 3	AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3	CR594439|SRD5A3|79644|steroid 5 alpha-reductase 3	NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3	BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	CR602749|SRD5A3|79644|steroid 5 alpha-reductase 3
hg18_v1_chr1_-_198856479_198856526	0.024562	AGGUAGU	D26361|KIF14|9928|kinesin family member 14	NM_014875|KIF14|9928|kinesin family member 14
hg18_v1_chr14_-_91642703_91642759	0.0243348	AGGUAGU	AB050194|ATXN3|4287|ataxin 3	U64820|ATXN3|4287|ataxin 3	NM_001127696|ATXN3|4287|ataxin 3	NM_001127697|ATXN3|4287|ataxin 3	NM_001164774|ATXN3|4287|ataxin 3	NM_001164776|ATXN3|4287|ataxin 3	NM_001164777|ATXN3|4287|ataxin 3	NM_001164778|ATXN3|4287|ataxin 3	NM_001164779|ATXN3|4287|ataxin 3	NM_001164780|ATXN3|4287|ataxin 3	NM_001164781|ATXN3|4287|ataxin 3	NM_001164782|ATXN3|4287|ataxin 3	NM_004993|ATXN3|4287|ataxin 3	NM_030660|ATXN3|4287|ataxin 3
hg18_v1_chr1_-_52293634_52293634	0.0233205	AGGUAGU	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr21_+_29593088_29593095	0.0227469	AGGUAGU	NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg18_v1_chr18_+_53862386_53862683	0.0224099	AGGUAGU	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr6_+_169844161_169844185	0.0224062	AGGUAGU	AF451991|C6orf120|387263|chromosome 6 open reading frame 120	BC051700|C6orf120|387263|chromosome 6 open reading frame 120	NM_001029863|C6orf120|387263|chromosome 6 open reading frame 120
hg18_v1_chr16_+_31391998_31392026	0.0221007	AGGUAGU	BC001507|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	BC001830|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	NM_015927|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1
hg18_v1_chr3_-_180272291_180272349	0.0204065	AGGUAGU	NM_022470|ZMAT3|64393|zinc finger, matrin-type 3	NM_152240|ZMAT3|64393|zinc finger, matrin-type 3
hg18_v1_chr5_-_145195029_145195133	0.0176519	AGGUAGU	BC028175|PRELID2|153768|PRELI domain containing 2	AK095695|PRELID2|153768|PRELI domain containing 2	AK125215|PRELID2|153768|PRELI domain containing 2	NM_182960|PRELID2|153768|PRELI domain containing 2	NM_205846|PRELID2|153768|PRELI domain containing 2	BC012033|PRELID2|153768|PRELI domain containing 2	NM_138492|PRELID2|153768|PRELI domain containing 2
hg18_v1_chr6_-_25019173_25019173	0.0163692	AGGUAGU	AB002384|FAM65B|9750|family with sequence similarity 65, member B	NM_014722|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr2_-_197165495_197165579	0.0162243	AGGUAGU	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr3_-_171382213_171382232	0.014526	AGGUAGU	AK022791|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	BC022325|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	AK300151|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	BC070164|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	AK304411|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	NM_024947|PHC3|80012|polyhomeotic homolog 3 (Drosophila)
hg18_v1_chr14_-_76856776_76856990	0.0107487	AGGUAGU	AB209114|POMT2|29954|protein-O-mannosyltransferase 2	BC031651|POMT2|29954|protein-O-mannosyltransferase 2	BX248027|POMT2|29954|protein-O-mannosyltransferase 2	AF105020|POMT2|29954|protein-O-mannosyltransferase 2	AY090480|POMT2|29954|protein-O-mannosyltransferase 2	NM_013382|POMT2|29954|protein-O-mannosyltransferase 2
hg18_v1_chr22_+_49128583_49128635	0.00876922	AGGUAGU	BC032664|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2	BC006568|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2	NM_014678|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2	BC052995|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2
hg18_v1_chr15_+_90815910_90815910	0.00858369	AGGUAGU	AK057393|C15orf32|145858|chromosome 15 open reading frame 32	NM_153040|C15orf32|145858|chromosome 15 open reading frame 32
hg18_v1_chr2_-_144768529_144768529	0.00735329	AGGUAGU	AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1	NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1
hg18_v1_chr16_+_68890559_68890596	0.00565644	AGGUAGU	AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR593012|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR625899|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg18_v1_chr17_-_37793885_37793996	0.00148789	AGGUAGU	BC014482|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	NM_213662|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	BC000627|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	BC029783|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	AK297994|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)
hg18_v1_chr7_-_22363036_22363057	0.00129297	AGGUAGU	AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5	NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5
hg18_v1_chr10_+_102662315_102662315	0.00113426	AGGUAGU	AF460991|FAM178A|55719|family with sequence similarity 178, member A	AF460992|FAM178A|55719|family with sequence similarity 178, member A	NM_001136123|FAM178A|55719|family with sequence similarity 178, member A	NM_018121|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chrX_-_47748204_47748390	0.00108642	AGGUAGU	BC114216|ZNF182|7569|zinc finger protein 182	AK299325|ZNF182|7569|zinc finger protein 182	AK122874|ZNF182|7569|zinc finger protein 182	NM_001007088|ZNF182|7569|zinc finger protein 182	NM_006962|ZNF182|7569|zinc finger protein 182	NM_001178099|ZNF182|7569|zinc finger protein 182
