hg18_v1_chr11_-_46896484_46896792	1.43276	AGUGGUU	AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4	BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4	BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4	AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4	NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4
hg18_v1_chr1_-_68071635_68071762	1.36442	AGUGGUU	AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	CR605876|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12
hg18_v1_chr2_+_178767317_178767623	1.32617	AGUGGUU	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr14_+_22845851_22845958	1.3097	AGUGGUU	NM_004050|BCL2L2|599|BCL2-like 2	AK289519|BCL2L2|599|BCL2-like 2	BC104789|BCL2L2|599|BCL2-like 2	BC113522|BCL2L2|599|BCL2-like 2	D87461|BCL2L2|599|BCL2-like 2	BC011637|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 read-through transcript
hg18_v1_chr11_+_86189138_86189309	1.27417	AGUGGUU	NM_007173|PRSS23|11098|protease, serine, 23	CR604686|PRSS23|11098|protease, serine, 23	AK075362|PRSS23|11098|protease, serine, 23	AK315562|PRSS23|11098|protease, serine, 23	AK304301|PRSS23|11098|protease, serine, 23	CR596876|PRSS23|11098|protease, serine, 23	AK304054|PRSS23|11098|protease, serine, 23	CR616418|PRSS23|11098|protease, serine, 23	CR624329|PRSS23|11098|protease, serine, 23	CR615791|PRSS23|11098|protease, serine, 23	CR598694|PRSS23|11098|protease, serine, 23	CR599725|PRSS23|11098|protease, serine, 23	CR607039|PRSS23|11098|protease, serine, 23	AL136914|PRSS23|11098|protease, serine, 23	BC001278|PRSS23|11098|protease, serine, 23	CR602641|PRSS23|11098|protease, serine, 23	CR608853|PRSS23|11098|protease, serine, 23	CR612074|PRSS23|11098|protease, serine, 23	CR622497|PRSS23|11098|protease, serine, 23	CR613177|PRSS23|11098|protease, serine, 23	CR614859|PRSS23|11098|protease, serine, 23	CR620693|PRSS23|11098|protease, serine, 23	AF015287|PRSS23|11098|protease, serine, 23	CR607812|PRSS23|11098|protease, serine, 23	CR594839|PRSS23|11098|protease, serine, 23	CR596737|PRSS23|11098|protease, serine, 23	CR609619|PRSS23|11098|protease, serine, 23	AF193611|PRSS23|11098|protease, serine, 23	AY359033|PRSS23|11098|protease, serine, 23	CR591812|PRSS23|11098|protease, serine, 23
hg18_v1_chr5_+_98132898_98132985	1.27309	AGUGGUU	BC067736|RGMB|285704|RGM domain family, member B	NM_001012761|RGMB|285704|RGM domain family, member B	AK074887|RGMB|285704|RGM domain family, member B
hg18_v1_chr20_-_48163071_48163123	1.25082	AGUGGUU	BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR604443|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR624783|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	CR615402|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1
hg18_v1_chr6_+_21701942_21702760	1.213	AGUGGUU	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg18_v1_chr20_+_6696744_6696744	1.09275	AGUGGUU	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg18_v1_chr8_+_70541412_70541426	1.06088	AGUGGUU	AK095341|SULF1|23213|sulfatase 1	NM_001128204|SULF1|23213|sulfatase 1	NM_015170|SULF1|23213|sulfatase 1	AF545571|SULF1|23213|sulfatase 1
hg18_v1_chr2_+_53867571_53867851	1.0171	AGUGGUU	NM_001127397|ERLEC1|27248|endoplasmic reticulum lectin 1	NM_001127398|ERLEC1|27248|endoplasmic reticulum lectin 1	NM_015701|ERLEC1|27248|endoplasmic reticulum lectin 1	CR604548|ERLEC1|27248|endoplasmic reticulum lectin 1	AY358717|ERLEC1|27248|endoplasmic reticulum lectin 1	CR601764|ERLEC1|27248|endoplasmic reticulum lectin 1	CR613668|ERLEC1|27248|endoplasmic reticulum lectin 1	AK001913|ERLEC1|27248|endoplasmic reticulum lectin 1	AY453410|ERLEC1|27248|endoplasmic reticulum lectin 1	BC013129|ERLEC1|27248|endoplasmic reticulum lectin 1	CR608194|ERLEC1|27248|endoplasmic reticulum lectin 1	BC022228|ERLEC1|27248|endoplasmic reticulum lectin 1	AK315477|ERLEC1|27248|endoplasmic reticulum lectin 1	CR597633|ERLEC1|27248|endoplasmic reticulum lectin 1	DQ894762|ERLEC1|27248|endoplasmic reticulum lectin 1
hg18_v1_chr15_+_78858763_78858790	0.925354	AGUGGUU	AB103330|KIAA1199|57214|KIAA1199	AK000465|KIAA1199|57214|KIAA1199	NM_018689|KIAA1199|57214|KIAA1199	BC020256|KIAA1199|57214|KIAA1199
hg18_v1_chr13_+_21143083_21143214	0.904727	AGUGGUU	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)
hg18_v1_chr14_+_36736867_36736871	0.897349	AGUGGUU	NM_001195296|MIPOL1|145282|mirror-image polydactyly 1	NM_001195297|MIPOL1|145282|mirror-image polydactyly 1	NM_138731|MIPOL1|145282|mirror-image polydactyly 1
hg18_v1_chr6_+_144040751_144040989	0.893434	AGUGGUU	AK298263|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2	CR749345|PHACTR2|9749|phosphatase and actin regulator 2	AK297799|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr1_-_166372244_166372247	0.865416	AGUGGUU	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr17_-_57497380_57497438	0.858921	AGUGGUU	BC140891|MED13|9969|mediator complex subunit 13	AF117754|MED13|9969|mediator complex subunit 13	NM_005121|MED13|9969|mediator complex subunit 13
hg18_v1_chr20_-_29774258_29774397	0.844031	AGUGGUU	AY263336|BCL2L1|598|BCL2-like 1	BC019307|BCL2L1|598|BCL2-like 1	NM_001191|BCL2L1|598|BCL2-like 1	NM_138578|BCL2L1|598|BCL2-like 1	AK290968|BCL2L1|598|BCL2-like 1	AY263335|BCL2L1|598|BCL2-like 1	CR936637|BCL2L1|598|BCL2-like 1
hg18_v1_chr2_-_217268492_217268518	0.82367	AGUGGUU	AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5	NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5
hg18_v1_chr2_+_48395271_48395373	0.808383	AGUGGUU	NM_002158|FOXN2|3344|forkhead box N2	BC063305|FOXN2|3344|forkhead box N2
hg18_v1_chr6_+_106640881_106640897	0.793965	AGUGGUU	AF084199|PRDM1|639|PR domain containing 1, with ZNF domain	AY198414|PRDM1|639|PR domain containing 1, with ZNF domain	NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain
hg18_v1_chr3_-_170348215_170348215	0.790472	AGUGGUU	BX640908|MECOM|2122|MDS1 and EVI1 complex locus	NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr6_+_149109841_149109963	0.762801	AGUGGUU	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg18_v1_chr15_-_54322767_54322782	0.750144	AGUGGUU	NM_022841|RFX7|64864|regulatory factor X, 7
hg18_v1_chr20_-_10602429_10602710	0.748217	AGUGGUU	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr2_-_148494732_148494932	0.732601	AGUGGUU	AK225092|ORC4|5000|origin recognition complex, subunit 4	BC005388|ORC4|5000|origin recognition complex, subunit 4	CR593105|ORC4|5000|origin recognition complex, subunit 4	CR599779|ORC4|5000|origin recognition complex, subunit 4	AF022108|ORC4|5000|origin recognition complex, subunit 4	AF047598|ORC4|5000|origin recognition complex, subunit 4	AF132596|ORC4|5000|origin recognition complex, subunit 4	BC014847|ORC4|5000|origin recognition complex, subunit 4	AK295721|ORC4|5000|origin recognition complex, subunit 4	AK291989|ORC4|5000|origin recognition complex, subunit 4	AK294878|ORC4|5000|origin recognition complex, subunit 4	AK298862|ORC4|5000|origin recognition complex, subunit 4	NM_001190882|ORC4|5000|origin recognition complex, subunit 4	NM_001190879|ORC4|5000|origin recognition complex, subunit 4	AK299749|ORC4|5000|origin recognition complex, subunit 4	NM_002552|ORC4|5000|origin recognition complex, subunit 4	NM_001190881|ORC4|5000|origin recognition complex, subunit 4	NM_181741|ORC4|5000|origin recognition complex, subunit 4
hg18_v1_chr3_-_126257425_126257556	0.727319	AGUGGUU	NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)
hg18_v1_chr2_+_178893216_178893216	0.723946	AGUGGUU	AK093902|OSBPL6|114880|oxysterol binding protein-like 6	NM_145739|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr12_+_105692466_105692719	0.704228	AGUGGUU	NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
hg18_v1_chr18_-_802268_802339	0.703882	AGUGGUU	AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1
hg18_v1_chr7_-_112513379_112514084	0.687937	AGUGGUU	AK297464|GPR85|54329|G protein-coupled receptor 85	AK312587|GPR85|54329|G protein-coupled receptor 85	NM_001146266|GPR85|54329|G protein-coupled receptor 85	AL161959|GPR85|54329|G protein-coupled receptor 85	NM_001146267|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr4_+_124537334_124537479	0.651363	AGUGGUU	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg18_v1_chr14_+_64240902_64240949	0.645094	AGUGGUU	BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg18_v1_chr17_-_39340638_39340652	0.642336	AGUGGUU	BC030287|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	CR936730|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	NM_005374|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	AK311166|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg18_v1_chr4_+_124540114_124540132	0.633156	AGUGGUU	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg18_v1_chr6_+_106653429_106653566	0.618887	AGUGGUU	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain	AY198415|PRDM1|639|PR domain containing 1, with ZNF domain	NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain	BC103832|PRDM1|639|PR domain containing 1, with ZNF domain	BC103833|PRDM1|639|PR domain containing 1, with ZNF domain	BC103834|PRDM1|639|PR domain containing 1, with ZNF domain	BC103835|PRDM1|639|PR domain containing 1, with ZNF domain
hg18_v1_chr11_-_101828563_101829084	0.612641	AGUGGUU	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr5_-_141684759_141684878	0.61168	AGUGGUU	AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)	NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)	NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)
hg18_v1_chr4_-_86106567_86106567	0.593214	AGUGGUU	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg18_v1_chr19_-_52426055_52426316	0.591295	AGUGGUU	U82987|BBC3|27113|BCL2 binding component 3	BC136481|BBC3|27113|BCL2 binding component 3	AF332558|BBC3|27113|BCL2 binding component 3	NM_014417|BBC3|27113|BCL2 binding component 3
hg18_v1_chr12_-_46499834_46500029	0.582315	AGUGGUU	AY302468|HDAC7|51564|histone deacetylase 7	AY321367|HDAC7|51564|histone deacetylase 7	BC064840|HDAC7|51564|histone deacetylase 7	AK303481|HDAC7|51564|histone deacetylase 7	AK299292|HDAC7|51564|histone deacetylase 7	AK225910|HDAC7|51564|histone deacetylase 7	NM_001098416|HDAC7|51564|histone deacetylase 7	NM_015401|HDAC7|51564|histone deacetylase 7
hg18_v1_chr5_-_16989371_16989400	0.569006	AGUGGUU	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg18_v1_chr15_+_36332258_36332370	0.56476	AGUGGUU	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1	AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr7_-_42243142_42243142	0.532111	AGUGGUU	NM_000168|GLI3|2737|GLI family zinc finger 3
hg18_v1_chr20_-_45848684_45848766	0.528034	AGUGGUU	AY358461|SULF2|55959|sulfatase 2	CR749319|SULF2|55959|sulfatase 2	AY101176|SULF2|55959|sulfatase 2	NM_001161841|SULF2|55959|sulfatase 2	NM_198596|SULF2|55959|sulfatase 2
hg18_v1_chr11_-_65871592_65871742	0.505482	AGUGGUU	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR623114|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR591559|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR617432|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg18_v1_chr14_-_67051773_67051954	0.504819	AGUGGUU	NM_182526|TMEM229B|161145|transmembrane protein 229B	AK090706|TMEM229B|161145|transmembrane protein 229B
hg18_v1_chr16_-_46976649_46976858	0.483742	AGUGGUU	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg18_v1_chr1_+_218768170_218768191	0.481893	AGUGGUU	AB040910|MARK1|4139|MAP/microtubule affinity-regulating kinase 1	NM_018650|MARK1|4139|MAP/microtubule affinity-regulating kinase 1
hg18_v1_chr6_+_143971009_143971102	0.477545	AGUGGUU	NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2	NM_014721|PHACTR2|9749|phosphatase and actin regulator 2	AK300221|PHACTR2|9749|phosphatase and actin regulator 2	AB014580|PHACTR2|9749|phosphatase and actin regulator 2	BC152416|PHACTR2|9749|phosphatase and actin regulator 2	BC150630|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr17_-_55958274_55958365	0.472738	AGUGGUU	AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg18_v1_chr16_-_69030421_69030544	0.464742	AGUGGUU	NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg18_v1_chr13_+_100902942_100903050	0.46028	AGUGGUU	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)
hg18_v1_chr1_-_117011824_117011989	0.457446	AGUGGUU	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3	NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3	BC110651|IGSF3|3321|immunoglobulin superfamily, member 3
hg18_v1_chr5_+_38881719_38881944	0.456851	AGUGGUU	NM_003999|OSMR|9180|oncostatin M receptor	BC010943|OSMR|9180|oncostatin M receptor	CR623600|OSMR|9180|oncostatin M receptor	U60805|OSMR|9180|oncostatin M receptor	AK304016|OSMR|9180|oncostatin M receptor	CR593298|OSMR|9180|oncostatin M receptor	BC063468|OSMR|9180|oncostatin M receptor
hg18_v1_chr2_-_148495642_148495642	0.453154	AGUGGUU	NM_181742|ORC4|5000|origin recognition complex, subunit 4
hg18_v1_chr17_+_28279040_28279228	0.44469	AGUGGUU	CR608592|TMEM98|26022|transmembrane protein 98	NM_001033504|TMEM98|26022|transmembrane protein 98	NM_015544|TMEM98|26022|transmembrane protein 98	CR605381|TMEM98|26022|transmembrane protein 98	CR608363|TMEM98|26022|transmembrane protein 98	CR596801|TMEM98|26022|transmembrane protein 98	CR597844|TMEM98|26022|transmembrane protein 98	CR605299|TMEM98|26022|transmembrane protein 98
hg18_v1_chr1_+_176960896_176961097	0.433594	AGUGGUU	BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2
hg18_v1_chr8_+_70567581_70567605	0.430387	AGUGGUU	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr11_-_8788765_8788817	0.424814	AGUGGUU	AK312305|ST5|6764|suppression of tumorigenicity 5	BX647431|ST5|6764|suppression of tumorigenicity 5	NM_213618|ST5|6764|suppression of tumorigenicity 5
hg18_v1_chr20_-_48165886_48165904	0.418261	AGUGGUU	AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1
hg18_v1_chr20_-_45848043_45848276	0.417141	AGUGGUU	AK308829|SULF2|55959|sulfatase 2	AB033073|SULF2|55959|sulfatase 2	NM_018837|SULF2|55959|sulfatase 2
hg18_v1_chr9_-_72219359_72219392	0.414508	AGUGGUU	D31716|KLF9|687|Kruppel-like factor 9	S72504|KLF9|687|Kruppel-like factor 9	NM_001206|KLF9|687|Kruppel-like factor 9
hg18_v1_chr9_+_131974506_131974763	0.405673	AGUGGUU	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg18_v1_chr1_+_100276242_100276376	0.404953	AGUGGUU	AF427492|HIAT1|64645|hippocampus abundant transcript 1	NM_033055|HIAT1|64645|hippocampus abundant transcript 1
hg18_v1_chr20_-_34807882_34807905	0.40145	AGUGGUU	AK027665|NDRG3|57446|NDRG family member 3	AK295466|NDRG3|57446|NDRG family member 3	AB044943|NDRG3|57446|NDRG family member 3	AK023618|NDRG3|57446|NDRG family member 3	AK295420|NDRG3|57446|NDRG family member 3	NM_022477|NDRG3|57446|NDRG family member 3	NM_032013|NDRG3|57446|NDRG family member 3
hg18_v1_chr2_-_183611470_183611509	0.400619	AGUGGUU	NM_013436|NCKAP1|10787|NCK-associated protein 1	NM_205842|NCKAP1|10787|NCK-associated protein 1
hg18_v1_chr2_-_177836773_177836862	0.400377	AGUGGUU	AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2
hg18_v1_chr17_-_4113777_4114023	0.400069	AGUGGUU	AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1	NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1
hg18_v1_chr1_-_85816520_85816637	0.397906	AGUGGUU	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr22_-_30476119_30476137	0.395671	AGUGGUU	NM_173566|PRR14L|253143|proline rich 14-like
hg18_v1_chr20_-_33793593_33793675	0.39302	AGUGGUU	NM_004902|RBM39|9584|RNA binding motif protein 39	NM_184234|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr3_+_137224266_137224350	0.392293	AGUGGUU	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg18_v1_chr17_+_50401095_50401158	0.390603	AGUGGUU	AK122865|STXBP4|252983|syntaxin binding protein 4	NM_178509|STXBP4|252983|syntaxin binding protein 4	BC125116|STXBP4|252983|syntaxin binding protein 4	CR593155|STXBP4|252983|syntaxin binding protein 4	BC041485|STXBP4|252983|syntaxin binding protein 4
hg18_v1_chr11_+_74137548_74137564	0.381677	AGUGGUU	AB082522|RNF169|254225|ring finger protein 169	NM_001098638|RNF169|254225|ring finger protein 169
hg18_v1_chr9_-_78198867_78199338	0.379496	AGUGGUU	CR618476|RFK|55312|riboflavin kinase	CR603745|RFK|55312|riboflavin kinase	BC007069|RFK|55312|riboflavin kinase	AK002011|RFK|55312|riboflavin kinase	AK307079|RFK|55312|riboflavin kinase	AK315734|RFK|55312|riboflavin kinase	NM_018339|RFK|55312|riboflavin kinase
hg18_v1_chr4_+_54790020_54790054	0.37706	AGUGGUU	NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg18_v1_chr5_-_77980097_77980548	0.373452	AGUGGUU	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg18_v1_chr3_-_170347019_170347093	0.36227	AGUGGUU	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr7_-_112515068_112515084	0.353899	AGUGGUU	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr3_+_180524244_180524244	0.352051	AGUGGUU	AB097862|ZNF639|51193|zinc finger protein 639	AF003924|ZNF639|51193|zinc finger protein 639	NM_016331|ZNF639|51193|zinc finger protein 639
hg18_v1_chr4_+_71986927_71987035	0.350868	AGUGGUU	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chr20_+_48781457_48781495	0.349486	AGUGGUU	BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)
hg18_v1_chr11_+_46255737_46255826	0.348007	AGUGGUU	AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg18_v1_chr21_-_15358996_15359180	0.343822	AGUGGUU	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg18_v1_chr2_+_10180145_10180275	0.341884	AGUGGUU	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr7_-_121571472_121571579	0.337121	AGUGGUU	AK225898|AASS|10157|aminoadipate-semialdehyde synthase	AF229180|AASS|10157|aminoadipate-semialdehyde synthase	AK294326|AASS|10157|aminoadipate-semialdehyde synthase	NM_005763|AASS|10157|aminoadipate-semialdehyde synthase
hg18_v1_chr4_-_23500706_23500797	0.329596	AGUGGUU	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg18_v1_chr1_+_39647762_39647762	0.329136	AGUGGUU	NM_015038|KIAA0754|643314|KIAA0754
hg18_v1_chr16_-_20819061_20819242	0.328758	AGUGGUU	BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
hg18_v1_chr15_+_88874098_88874341	0.325036	AGUGGUU	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3	NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3	NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3	BC019060|CRTC3|64784|CREB regulated transcription coactivator 3	AY360173|CRTC3|64784|CREB regulated transcription coactivator 3
hg18_v1_chr12_+_49728350_49728420	0.324052	AGUGGUU	AF329277|LETMD1|25875|LETM1 domain containing 1	NM_001024668|LETMD1|25875|LETM1 domain containing 1	NM_015416|LETMD1|25875|LETM1 domain containing 1	AK301955|LETMD1|25875|LETM1 domain containing 1	AF195651|LETMD1|25875|LETM1 domain containing 1	AK000639|LETMD1|25875|LETM1 domain containing 1	AK304707|LETMD1|25875|LETM1 domain containing 1	AK315119|LETMD1|25875|LETM1 domain containing 1	AK127540|LETMD1|25875|LETM1 domain containing 1	AK301898|LETMD1|25875|LETM1 domain containing 1	AK225836|LETMD1|25875|LETM1 domain containing 1	CR605694|LETMD1|25875|LETM1 domain containing 1	CR603920|LETMD1|25875|LETM1 domain containing 1	CR612978|LETMD1|25875|LETM1 domain containing 1	CR600835|LETMD1|25875|LETM1 domain containing 1	CR618203|LETMD1|25875|LETM1 domain containing 1	CR623560|LETMD1|25875|LETM1 domain containing 1	BC064943|LETMD1|25875|LETM1 domain containing 1	AK057866|LETMD1|25875|LETM1 domain containing 1	AF315598|LETMD1|25875|LETM1 domain containing 1	AY259835|LETMD1|25875|LETM1 domain containing 1	AY259836|LETMD1|25875|LETM1 domain containing 1	CR590466|LETMD1|25875|LETM1 domain containing 1	CR591933|LETMD1|25875|LETM1 domain containing 1	CR595375|LETMD1|25875|LETM1 domain containing 1	CR596903|LETMD1|25875|LETM1 domain containing 1
hg18_v1_chr3_-_52694554_52695065	0.322555	AGUGGUU	AF197569|PBRM1|55193|polybromo 1	NM_018313|PBRM1|55193|polybromo 1
hg18_v1_chr16_-_56077827_56077946	0.317554	AGUGGUU	BC003541|DOK4|55715|docking protein 4	NM_018110|DOK4|55715|docking protein 4	AK001350|DOK4|55715|docking protein 4
hg18_v1_chr5_-_56283672_56283730	0.315663	AGUGGUU	BX537798|MIER3|166968|mesoderm induction early response 1, family member 3	BX640907|MIER3|166968|mesoderm induction early response 1, family member 3	CR749246|MIER3|166968|mesoderm induction early response 1, family member 3	CR749805|MIER3|166968|mesoderm induction early response 1, family member 3	BX647359|MIER3|166968|mesoderm induction early response 1, family member 3	BX648294|MIER3|166968|mesoderm induction early response 1, family member 3	BC041348|MIER3|166968|mesoderm induction early response 1, family member 3	NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3
hg18_v1_chr7_-_29995809_29996258	0.315618	AGUGGUU	AB071705|SCRN1|9805|secernin 1	AK295713|SCRN1|9805|secernin 1	D83777|SCRN1|9805|secernin 1	AK293462|SCRN1|9805|secernin 1	BC040492|SCRN1|9805|secernin 1	NM_001145515|SCRN1|9805|secernin 1	NM_014766|SCRN1|9805|secernin 1	NM_001145513|SCRN1|9805|secernin 1
hg18_v1_chr16_-_46957284_46957300	0.311873	AGUGGUU	NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)
hg18_v1_chr11_-_85015961_85015961	0.309682	AGUGGUU	CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr20_-_57051231_57051295	0.309218	AGUGGUU	AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)	AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)	BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)	BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)	AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)	AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)	NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)
hg18_v1_chr2_+_241903395_241903486	0.301257	AGUGGUU	BC014455|SEPT2|4735|septin 2	NM_001008491|SEPT2|4735|septin 2	NM_006155|SEPT2|4735|septin 2	D63878|SEPT2|4735|septin 2
hg18_v1_chr12_-_12606511_12606824	0.30089	AGUGGUU	AB052156|DUSP16|80824|dual specificity phosphatase 16	BC109234|DUSP16|80824|dual specificity phosphatase 16	BC109235|DUSP16|80824|dual specificity phosphatase 16	AF506796|DUSP16|80824|dual specificity phosphatase 16	NM_030640|DUSP16|80824|dual specificity phosphatase 16
hg18_v1_chr17_+_58440629_58440629	0.296628	AGUGGUU	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr10_+_116687904_116688002	0.296463	AGUGGUU	AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)
hg18_v1_chr5_+_68746694_68746710	0.294917	AGUGGUU	NM_001038603|MARVELD2|153562|MARVEL domain containing 2	AK055094|MARVELD2|153562|MARVEL domain containing 2	BC033689|MARVELD2|153562|MARVEL domain containing 2	DQ682656|MARVELD2|153562|MARVEL domain containing 2	DQ682657|MARVELD2|153562|MARVEL domain containing 2	AK292962|MARVELD2|153562|MARVEL domain containing 2
hg18_v1_chr13_-_76799177_76799231	0.293613	AGUGGUU	NM_015057|MYCBP2|23077|MYC binding protein 2
hg18_v1_chr22_-_16887151_16887372	0.283954	AGUGGUU	AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3	NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3	NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3	NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3
hg18_v1_chr3_-_65999548_65999558	0.283177	AGUGGUU	BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg18_v1_chr1_+_173303616_173303616	0.282092	AGUGGUU	AK127044|TNN|63923|tenascin N	NM_022093|TNN|63923|tenascin N
hg18_v1_chr3_-_170346760_170346786	0.278921	AGUGGUU	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg18_v1_chr17_-_44794325_44794833	0.276171	AGUGGUU	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr1_+_181258952_181259302	0.275837	AGUGGUU	BC067813|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	NM_002293|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	J03202|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)
hg18_v1_chr5_-_38592439_38592532	0.275311	AGUGGUU	AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr5_+_52320660_52321094	0.275045	AGUGGUU	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg18_v1_chr1_+_11917330_11917357	0.273907	AGUGGUU	NM_000302|PLOD1|5351|procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1
hg18_v1_chr16_-_68880908_68880916	0.273423	AGUGGUU	AK222824|AARS|16|alanyl-tRNA synthetase	AK225116|AARS|16|alanyl-tRNA synthetase	AK307782|AARS|16|alanyl-tRNA synthetase	D32050|AARS|16|alanyl-tRNA synthetase	NM_001605|AARS|16|alanyl-tRNA synthetase
hg18_v1_chr16_+_68156497_68156497	0.27213	AGUGGUU	AF346509|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_001113178|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_006599|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_138713|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_138714|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	NM_173214|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr15_+_97010219_97010339	0.264196	AGUGGUU	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor	X04434|IGF1R|3480|insulin-like growth factor 1 receptor	BC113610|IGF1R|3480|insulin-like growth factor 1 receptor	BC113612|IGF1R|3480|insulin-like growth factor 1 receptor	BC143721|IGF1R|3480|insulin-like growth factor 1 receptor	EU826611|IGF1R|3480|insulin-like growth factor 1 receptor	EU826612|IGF1R|3480|insulin-like growth factor 1 receptor
hg18_v1_chr9_+_130222511_130222579	0.261121	AGUGGUU	NM_016174|CERCAM|51148|cerebral endothelial cell adhesion molecule
hg18_v1_chr9_+_107360203_107360285	0.258891	AGUGGUU	NM_001079802|FKTN|2218|fukutin	NM_001198963|FKTN|2218|fukutin	NM_006731|FKTN|2218|fukutin	AK300840|FKTN|2218|fukutin	AK304460|FKTN|2218|fukutin	BC058842|FKTN|2218|fukutin	AB008226|FKTN|2218|fukutin
hg18_v1_chr18_+_9126742_9126841	0.256573	AGUGGUU	NM_001083625|ANKRD12|23253|ankyrin repeat domain 12	NM_015208|ANKRD12|23253|ankyrin repeat domain 12	BC070234|ANKRD12|23253|ankyrin repeat domain 12	AK024808|ANKRD12|23253|ankyrin repeat domain 12	AY373757|ANKRD12|23253|ankyrin repeat domain 12	BC057225|ANKRD12|23253|ankyrin repeat domain 12	AL834204|ANKRD12|23253|ankyrin repeat domain 12
hg18_v1_chr11_+_57285809_57286021	0.254331	AGUGGUU	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg18_v1_chr5_-_180169422_180169434	0.254273	AGUGGUU	NM_001114618|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK094130|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr19_-_56215084_56215242	0.250003	AGUGGUU	AK292365|KLK10|5655|kallikrein-related peptidase 10	BC002710|KLK10|5655|kallikrein-related peptidase 10	NM_002776|KLK10|5655|kallikrein-related peptidase 10	NM_001077500|KLK10|5655|kallikrein-related peptidase 10
hg18_v1_chr9_+_111582317_111582556	0.249414	AGUGGUU	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_053016|PALM2|114299|paralemmin 2	NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ312216|PALM2|114299|paralemmin 2	AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough
hg18_v1_chr12_-_47468985_47469166	0.249072	AGUGGUU	AB007882|ADCY6|112|adenylate cyclase 6	NM_020983|ADCY6|112|adenylate cyclase 6	BC064923|ADCY6|112|adenylate cyclase 6
hg18_v1_chr17_+_33761234_33761544	0.248825	AGUGGUU	NM_014598|SOCS7|30837|suppressor of cytokine signaling 7	BC121030|SOCS7|30837|suppressor of cytokine signaling 7	BC121031|SOCS7|30837|suppressor of cytokine signaling 7	BC128607|SOCS7|30837|suppressor of cytokine signaling 7
hg18_v1_chr10_-_104252394_104252501	0.248738	AGUGGUU	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR610318|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	CR600058|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg18_v1_chr2_+_198278276_198278476	0.2475	AGUGGUU	AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial	BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr21_+_29593607_29593607	0.246545	AGUGGUU	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg18_v1_chr9_-_98841186_98841412	0.243033	AGUGGUU	AF070448|CTSL2|1515|cathepsin L2	BC023504|CTSL2|1515|cathepsin L2	Y14734|CTSL2|1515|cathepsin L2	AB001928|CTSL2|1515|cathepsin L2	AK310645|CTSL2|1515|cathepsin L2	AK310740|CTSL2|1515|cathepsin L2	BC110512|CTSL2|1515|cathepsin L2	NM_001333|CTSL2|1515|cathepsin L2	AY358641|CTSL2|1515|cathepsin L2
hg18_v1_chr2_+_32435550_32435684	0.242526	AGUGGUU	NM_016252|BIRC6|57448|baculoviral IAP repeat containing 6
hg18_v1_chr6_+_10803141_10803204	0.241059	AGUGGUU	BC010907|PAK1IP1|55003|PAK1 interacting protein 1	NM_017906|PAK1IP1|55003|PAK1 interacting protein 1	DQ892798|PAK1IP1|55003|PAK1 interacting protein 1	DQ896045|PAK1IP1|55003|PAK1 interacting protein 1
hg18_v1_chr2_-_197165495_197165579	0.240263	AGUGGUU	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr9_-_21999270_21999311	0.239549	AGUGGUU	AF004819|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	U17075|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	L36844|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	BC014469|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	NM_004936|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	NM_078487|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
hg18_v1_chr9_-_129782624_129782637	0.236507	AGUGGUU	AK058004|FAM102A|399665|family with sequence similarity 102, member A	NM_001035254|FAM102A|399665|family with sequence similarity 102, member A
hg18_v1_chr1_-_32176562_32176607	0.234845	AGUGGUU	NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2
hg18_v1_chr11_-_8889073_8889073	0.234665	AGUGGUU	BC036655|ST5|6764|suppression of tumorigenicity 5	NM_005418|ST5|6764|suppression of tumorigenicity 5
hg18_v1_chr2_+_64604940_64605036	0.232529	AGUGGUU	NM_001002243|AFTPH|54812|aftiphilin	NM_017657|AFTPH|54812|aftiphilin	NM_203437|AFTPH|54812|aftiphilin	BC047529|AFTPH|54812|aftiphilin	AK000087|AFTPH|54812|aftiphilin	AK222821|AFTPH|54812|aftiphilin
hg18_v1_chr1_-_154290112_154290166	0.232272	AGUGGUU	AB209566|UBQLN4|56893|ubiquilin 4	AK098368|UBQLN4|56893|ubiquilin 4	AK314413|UBQLN4|56893|ubiquilin 4	BC018403|UBQLN4|56893|ubiquilin 4	AK302895|UBQLN4|56893|ubiquilin 4	BC063841|UBQLN4|56893|ubiquilin 4	NM_020131|UBQLN4|56893|ubiquilin 4
hg18_v1_chr10_-_51293220_51293391	0.232263	AGUGGUU	CR619494|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	CR618692|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	CR621868|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	CR592367|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	CR615767|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK304883|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK223331|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	CR592829|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC066951|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	NM_006327|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	AF030162|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	AY442341|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	CR596190|TIMM23B|653252|translocase of inner mitochondrial membrane 23 homolog B (yeast)	BC062707|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)
hg18_v1_chr21_-_14677310_14677379	0.227731	AGUGGUU	CR603870|HSPA13|6782|heat shock protein 70kDa family, member 13	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13	AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13	AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13	AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13	BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13	U04735|HSPA13|6782|heat shock protein 70kDa family, member 13	NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13
hg18_v1_chr2_-_200528703_200528703	0.227615	AGUGGUU	BX647677|C2orf60|129450|chromosome 2 open reading frame 60	NM_001039693|C2orf60|129450|chromosome 2 open reading frame 60
hg18_v1_chr8_+_75425171_75425320	0.225047	AGUGGUU	NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1	BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1	BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1	NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1	AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1	AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1	Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1
hg18_v1_chr19_+_10597167_10597271	0.224424	AGUGGUU	NM_020428|SLC44A2|57153|solute carrier family 44, member 2	AK314582|SLC44A2|57153|solute carrier family 44, member 2	BC040556|SLC44A2|57153|solute carrier family 44, member 2	BC042692|SLC44A2|57153|solute carrier family 44, member 2
hg18_v1_chr17_-_33043514_33043613	0.219529	AGUGGUU	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr8_+_38973588_38973678	0.219333	AGUGGUU	BC027996|ADAM9|8754|ADAM metallopeptidase domain 9	NM_003816|ADAM9|8754|ADAM metallopeptidase domain 9	U41766|ADAM9|8754|ADAM metallopeptidase domain 9
hg18_v1_chr5_+_6767717_6767784	0.219007	AGUGGUU	NM_001171805|PAPD7|11044|PAP associated domain containing 7	NM_006999|PAPD7|11044|PAP associated domain containing 7	AF089896|PAPD7|11044|PAP associated domain containing 7	BC084567|PAPD7|11044|PAP associated domain containing 7
hg18_v1_chr15_-_50758100_50758247	0.218794	AGUGGUU	AB037791|KIAA1370|56204|KIAA1370	AK292917|KIAA1370|56204|KIAA1370	NM_019600|KIAA1370|56204|KIAA1370	BC040548|KIAA1370|56204|KIAA1370	AK308049|KIAA1370|56204|KIAA1370
hg18_v1_chr15_+_88345612_88345774	0.216146	AGUGGUU	BC020301|ZNF710|374655|zinc finger protein 710	AK094712|ZNF710|374655|zinc finger protein 710	NM_198526|ZNF710|374655|zinc finger protein 710
hg18_v1_chr19_-_56214765_56214831	0.215749	AGUGGUU	AF024605|KLK10|5655|kallikrein-related peptidase 10	NM_145888|KLK10|5655|kallikrein-related peptidase 10	AY561635|KLK10|5655|kallikrein-related peptidase 10
hg18_v1_chr1_+_117711575_117711657	0.214799	AGUGGUU	BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2	AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2	NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2	BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2
hg18_v1_chr5_+_72287509_72287573	0.212955	AGUGGUU	BC137070|FCHO2|115548|FCH domain only 2	NM_001146032|FCHO2|115548|FCH domain only 2	NM_138782|FCHO2|115548|FCH domain only 2
hg18_v1_chr14_-_89155078_89155619	0.21231	AGUGGUU	AK225967|FOXN3|1112|forkhead box N3	AK308053|FOXN3|1112|forkhead box N3	NM_001085471|FOXN3|1112|forkhead box N3
hg18_v1_chr4_+_38722593_38723074	0.212181	AGUGGUU	NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)	NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)	BC053860|KLHL5|51088|kelch-like 5 (Drosophila)	AB208820|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr18_+_9698187_9698231	0.211248	AGUGGUU	AF234995|RAB31|11031|RAB31, member RAS oncogene family	NM_006868|RAB31|11031|RAB31, member RAS oncogene family
hg18_v1_chr17_-_50854054_50854454	0.21118	AGUGGUU	CR541893|MMD|23531|monocyte to macrophage differentiation-associated	DQ892362|MMD|23531|monocyte to macrophage differentiation-associated	DQ895569|MMD|23531|monocyte to macrophage differentiation-associated	X85750|MMD|23531|monocyte to macrophage differentiation-associated	AK312760|MMD|23531|monocyte to macrophage differentiation-associated	AK303810|MMD|23531|monocyte to macrophage differentiation-associated	BC026324|MMD|23531|monocyte to macrophage differentiation-associated	AY424289|MMD|23531|monocyte to macrophage differentiation-associated	NM_012329|MMD|23531|monocyte to macrophage differentiation-associated
hg18_v1_chr19_-_57223329_57223636	0.21103	AGUGGUU	BC101392|ZNF614|80110|zinc finger protein 614	BC101393|ZNF614|80110|zinc finger protein 614	BC101394|ZNF614|80110|zinc finger protein 614	BC101395|ZNF614|80110|zinc finger protein 614	AK309346|ZNF614|80110|zinc finger protein 614	BC004930|ZNF614|80110|zinc finger protein 614	AK097156|ZNF614|80110|zinc finger protein 614	NM_025040|ZNF614|80110|zinc finger protein 614
hg18_v1_chr1_+_182622751_182622801	0.210864	AGUGGUU	NM_030806|C1orf21|81563|chromosome 1 open reading frame 21
hg18_v1_chr6_-_131426080_131426154	0.206861	AGUGGUU	AK295124|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001135555|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001135554|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001431|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg18_v1_chr1_+_52964609_52964804	0.205691	AGUGGUU	AK296460|ZYG11B|79699|zyg-11 homolog B (C. elegans)	NM_024646|ZYG11B|79699|zyg-11 homolog B (C. elegans)	AB051517|ZYG11B|79699|zyg-11 homolog B (C. elegans)
hg18_v1_chr20_+_19946542_19946542	0.204837	AGUGGUU	NM_181527|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit
hg18_v1_chr12_-_47464143_47464178	0.193836	AGUGGUU	AK225224|ADCY6|112|adenylate cyclase 6	NM_015270|ADCY6|112|adenylate cyclase 6	AF250226|ADCY6|112|adenylate cyclase 6
hg18_v1_chr4_-_153820535_153820766	0.192972	AGUGGUU	BC060775|TMEM154|201799|transmembrane protein 154	AK296694|TMEM154|201799|transmembrane protein 154	AK309319|TMEM154|201799|transmembrane protein 154	AK056590|TMEM154|201799|transmembrane protein 154	NM_152680|TMEM154|201799|transmembrane protein 154
hg18_v1_chr3_+_57718067_57718418	0.192431	AGUGGUU	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg18_v1_chr1_-_52228880_52229023	0.191775	AGUGGUU	M28214|RAB3B|5865|RAB3B, member RAS oncogene family	BC005035|RAB3B|5865|RAB3B, member RAS oncogene family	AK291653|RAB3B|5865|RAB3B, member RAS oncogene family	NM_002867|RAB3B|5865|RAB3B, member RAS oncogene family
hg18_v1_chr20_+_1047216_1047490	0.191074	AGUGGUU	NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	CR600493|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	CR592856|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg18_v1_chr6_-_110607857_110607899	0.190292	AGUGGUU	NM_001024934|WASF1|8936|WAS protein family, member 1	NM_001024935|WASF1|8936|WAS protein family, member 1	NM_001024936|WASF1|8936|WAS protein family, member 1	NM_003931|WASF1|8936|WAS protein family, member 1
hg18_v1_chr9_-_106730256_106730346	0.189265	AGUGGUU	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg18_v1_chr11_-_8789457_8789457	0.188207	AGUGGUU	NM_139157|ST5|6764|suppression of tumorigenicity 5	U15131|ST5|6764|suppression of tumorigenicity 5	U15780|ST5|6764|suppression of tumorigenicity 5
hg18_v1_chr16_-_4757125_4757245	0.187325	AGUGGUU	AK291792|ZNF500|26048|zinc finger protein 500	NM_021646|ZNF500|26048|zinc finger protein 500	AK297993|ZNF500|26048|zinc finger protein 500
hg18_v1_chr1_-_85703321_85703736	0.18575	AGUGGUU	BC033680|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK312432|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_012137|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr7_-_66097838_66098033	0.185435	AGUGGUU	CR597378|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR606624|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622210|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601377|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR610261|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622442|SBDS|51119|Shwachman-Bodian-Diamond syndrome	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR591576|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR604577|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR612387|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601234|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR613995|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR596032|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR626007|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg18_v1_chr4_+_79197747_79197781	0.183268	AGUGGUU	NM_001166133|FRAS1|80144|Fraser syndrome 1	NM_025074|FRAS1|80144|Fraser syndrome 1	AK096838|FRAS1|80144|Fraser syndrome 1
hg18_v1_chr16_-_23068010_23068091	0.183257	AGUGGUU	AK126752|USP31|57478|ubiquitin specific peptidase 31	AJ586135|USP31|57478|ubiquitin specific peptidase 31	NM_020718|USP31|57478|ubiquitin specific peptidase 31
hg18_v1_chr15_-_32289561_32289626	0.183197	AGUGGUU	BC037234|C15orf29|79768|chromosome 15 open reading frame 29	AL833631|C15orf29|79768|chromosome 15 open reading frame 29	AK293695|C15orf29|79768|chromosome 15 open reading frame 29	AK311338|C15orf29|79768|chromosome 15 open reading frame 29	NM_024713|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr2_+_114935623_114935649	0.182806	AGUGGUU	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chr7_+_113842284_113842382	0.182431	AGUGGUU	AY144615|FOXP2|93986|forkhead box P2	BC018016|FOXP2|93986|forkhead box P2	NM_001172766|FOXP2|93986|forkhead box P2	NM_014491|FOXP2|93986|forkhead box P2	NM_148898|FOXP2|93986|forkhead box P2	NM_148900|FOXP2|93986|forkhead box P2
hg18_v1_chr6_-_53321706_53321901	0.18195	AGUGGUU	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr1_-_180627023_180627300	0.181155	AGUGGUU	NM_001033056|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr5_-_64813459_64813502	0.180539	AGUGGUU	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg18_v1_chr14_-_81069951_81070010	0.180535	AGUGGUU	NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)
hg18_v1_chr2_-_179837490_179837810	0.176913	AGUGGUU	AY209190|SESTD1|91404|SEC14 and spectrin domains 1	AK096232|SESTD1|91404|SEC14 and spectrin domains 1	NM_178123|SESTD1|91404|SEC14 and spectrin domains 1	BC047578|SESTD1|91404|SEC14 and spectrin domains 1
hg18_v1_chr7_-_117300763_117300796	0.176721	AGUGGUU	BC106000|CTTNBP2|83992|cortactin binding protein 2	AF377960|CTTNBP2|83992|cortactin binding protein 2	NM_033427|CTTNBP2|83992|cortactin binding protein 2
hg18_v1_chr3_-_46012303_46012347	0.175126	AGUGGUU	AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1	AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1	NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1
hg18_v1_chr4_-_129106542_129106588	0.175109	AGUGGUU	AK294184|MFSD8|256471|major facilitator superfamily domain containing 8	AK294527|MFSD8|256471|major facilitator superfamily domain containing 8	BC029503|MFSD8|256471|major facilitator superfamily domain containing 8	AK294957|MFSD8|256471|major facilitator superfamily domain containing 8	NM_152778|MFSD8|256471|major facilitator superfamily domain containing 8
hg18_v1_chr16_-_66827449_66827636	0.172415	AGUGGUU	BC030146|ESRP2|80004|epithelial splicing regulatory protein 2	BC052309|ESRP2|80004|epithelial splicing regulatory protein 2	CR592167|ESRP2|80004|epithelial splicing regulatory protein 2	AK025571|ESRP2|80004|epithelial splicing regulatory protein 2	NM_024939|ESRP2|80004|epithelial splicing regulatory protein 2
hg18_v1_chr2_-_27739947_27740046	0.171827	AGUGGUU	BC074000|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	AB018307|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	NM_014860|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	CR616333|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	AF197954|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	AK000329|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	AK304889|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	BC045638|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like	AF224759|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like
hg18_v1_chr17_-_35510431_35510569	0.171566	AGUGGUU	M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	CR608219|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1
hg18_v1_chr12_-_103846186_103846601	0.170349	AGUGGUU	AL136828|SLC41A2|84102|solute carrier family 41, member 2	EU832572|SLC41A2|84102|solute carrier family 41, member 2	BC106871|SLC41A2|84102|solute carrier family 41, member 2	BC106872|SLC41A2|84102|solute carrier family 41, member 2	AK027838|SLC41A2|84102|solute carrier family 41, member 2	BC036734|SLC41A2|84102|solute carrier family 41, member 2	NM_032148|SLC41A2|84102|solute carrier family 41, member 2
hg18_v1_chr4_-_147079018_147079236	0.17013	AGUGGUU	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg18_v1_chr12_-_78853057_78853138	0.169408	AGUGGUU	NM_002480|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A
hg18_v1_chr1_-_180627934_180627993	0.169008	AGUGGUU	AK122784|GLUL|2752|glutamate-ammonia ligase	NM_001033044|GLUL|2752|glutamate-ammonia ligase	NM_002065|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr1_-_172228673_172228832	0.168576	AGUGGUU	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr2_+_118562499_118562568	0.168413	AGUGGUU	AK298599|INSIG2|51141|insulin induced gene 2	AK291433|INSIG2|51141|insulin induced gene 2	AF527632|INSIG2|51141|insulin induced gene 2	BC022475|INSIG2|51141|insulin induced gene 2	NM_016133|INSIG2|51141|insulin induced gene 2	BX647805|INSIG2|51141|insulin induced gene 2	AK021692|INSIG2|51141|insulin induced gene 2
hg18_v1_chr11_-_10272256_10272428	0.167315	AGUGGUU	BC101466|SBF2|81846|SET binding factor 2	AY234241|SBF2|81846|SET binding factor 2	NM_030962|SBF2|81846|SET binding factor 2
hg18_v1_chr14_+_85066207_85066246	0.165422	AGUGGUU	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg18_v1_chr7_-_25131427_25131504	0.165097	AGUGGUU	AK311836|CYCS|54205|cytochrome c, somatic	CR621998|CYCS|54205|cytochrome c, somatic	CR624739|CYCS|54205|cytochrome c, somatic	BC024216|CYCS|54205|cytochrome c, somatic	NM_018947|CYCS|54205|cytochrome c, somatic
hg18_v1_chr5_+_14196287_14197057	0.164925	AGUGGUU	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)	AF091395|TRIO|7204|triple functional domain (PTPRF interacting)	U42390|TRIO|7204|triple functional domain (PTPRF interacting)
hg18_v1_chr2_-_37047113_37047166	0.164382	AGUGGUU	BC106879|STRN|6801|striatin, calmodulin binding protein	AJ223814|STRN|6801|striatin, calmodulin binding protein	BC106878|STRN|6801|striatin, calmodulin binding protein	NM_003162|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr1_-_205290921_205291044	0.163882	AGUGGUU	AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)	NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)
hg18_v1_chr16_-_65287967_65288299	0.162994	AGUGGUU	BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4	AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4	AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4	AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4	NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4	NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4
hg18_v1_chr20_-_23014828_23015038	0.157969	AGUGGUU	AM393282|CD93|22918|CD93 molecule	AM393752|CD93|22918|CD93 molecule	DQ891055|CD93|22918|CD93 molecule	DQ894234|CD93|22918|CD93 molecule	AJ295142|CD93|22918|CD93 molecule	AB209895|CD93|22918|CD93 molecule	BC028075|CD93|22918|CD93 molecule	AK299957|CD93|22918|CD93 molecule	NM_012072|CD93|22918|CD93 molecule	U94333|CD93|22918|CD93 molecule
hg18_v1_chr2_-_9688552_9688601	0.157419	AGUGGUU	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
hg18_v1_chr21_-_33022187_33022221	0.15531	AGUGGUU	NM_003895|SYNJ1|8867|synaptojanin 1	NM_203446|SYNJ1|8867|synaptojanin 1
hg18_v1_chr16_+_30617962_30617962	0.153805	AGUGGUU	AK128030|SRCAP|10847|Snf2-related CREBBP activator protein	NM_006662|SRCAP|10847|Snf2-related CREBBP activator protein
hg18_v1_chr2_-_171999473_171999589	0.148726	AGUGGUU	AK292108|METTL8|79828|methyltransferase like 8	NM_024770|METTL8|79828|methyltransferase like 8	AK297141|METTL8|79828|methyltransferase like 8
hg18_v1_chr7_-_126819953_126820036	0.147718	AGUGGUU	AF218032|ZNF800|168850|zinc finger protein 800	NM_176814|ZNF800|168850|zinc finger protein 800	AK309674|ZNF800|168850|zinc finger protein 800	BC047641|ZNF800|168850|zinc finger protein 800
hg18_v1_chr6_+_47553399_47553549	0.147046	AGUGGUU	NM_012120|CD2AP|23607|CD2-associated protein
hg18_v1_chr1_+_32777358_32777358	0.146929	AGUGGUU	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr20_-_54400628_54400757	0.146614	AGUGGUU	BC002499|AURKA|6790|aurora kinase A	BC006423|AURKA|6790|aurora kinase A	CR621289|AURKA|6790|aurora kinase A	AF011468|AURKA|6790|aurora kinase A	BC001280|AURKA|6790|aurora kinase A	D84212|AURKA|6790|aurora kinase A	AK312776|AURKA|6790|aurora kinase A	CR616247|AURKA|6790|aurora kinase A	CR611278|AURKA|6790|aurora kinase A	BC027464|AURKA|6790|aurora kinase A	AK301769|AURKA|6790|aurora kinase A	NM_003600|AURKA|6790|aurora kinase A	NM_198433|AURKA|6790|aurora kinase A	NM_198434|AURKA|6790|aurora kinase A	NM_198435|AURKA|6790|aurora kinase A	NM_198436|AURKA|6790|aurora kinase A	NM_198437|AURKA|6790|aurora kinase A
hg18_v1_chr8_-_99906944_99907102	0.146261	AGUGGUU	U60206|STK3|6788|serine/threonine kinase 3	AK291837|STK3|6788|serine/threonine kinase 3	AK075229|STK3|6788|serine/threonine kinase 3	BC010640|STK3|6788|serine/threonine kinase 3	AK307787|STK3|6788|serine/threonine kinase 3	AK312660|STK3|6788|serine/threonine kinase 3	NM_006281|STK3|6788|serine/threonine kinase 3	U26424|STK3|6788|serine/threonine kinase 3
hg18_v1_chr21_-_33022099_33022160	0.14588	AGUGGUU	AK307762|SYNJ1|8867|synaptojanin 1	BC019630|SYNJ1|8867|synaptojanin 1	AB020717|SYNJ1|8867|synaptojanin 1	NM_001160302|SYNJ1|8867|synaptojanin 1	NM_001160306|SYNJ1|8867|synaptojanin 1	AF009039|SYNJ1|8867|synaptojanin 1	AF009040|SYNJ1|8867|synaptojanin 1
hg18_v1_chr8_-_134653194_134653364	0.145114	AGUGGUU	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	CR604109|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1	NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg18_v1_chr6_+_37333484_37333671	0.144928	AGUGGUU	AY313781|TBC1D22B|55633|TBC1 domain family, member 22B	BC047658|TBC1D22B|55633|TBC1 domain family, member 22B	NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B	AK096340|TBC1D22B|55633|TBC1 domain family, member 22B	BC109026|TBC1D22B|55633|TBC1 domain family, member 22B	BC109027|TBC1D22B|55633|TBC1 domain family, member 22B	BX648317|TBC1D22B|55633|TBC1 domain family, member 22B	AK292893|TBC1D22B|55633|TBC1 domain family, member 22B	AB449909|TBC1D22B|55633|TBC1 domain family, member 22B
hg18_v1_chr2_+_202024636_202024798	0.144895	AGUGGUU	AK027637|STRADB|55437|STE20-related kinase adaptor beta	NM_018571|STRADB|55437|STE20-related kinase adaptor beta	AK290457|STRADB|55437|STE20-related kinase adaptor beta	BC008302|STRADB|55437|STE20-related kinase adaptor beta	AY093697|STRADB|55437|STE20-related kinase adaptor beta	AB038950|STRADB|55437|STE20-related kinase adaptor beta	BC090871|STRADB|55437|STE20-related kinase adaptor beta
hg18_v1_chr2_-_200030944_200031068	0.144421	AGUGGUU	AK056638|SATB2|23314|SATB homeobox 2	NM_001172509|SATB2|23314|SATB homeobox 2
hg18_v1_chr4_-_74704964_74705203	0.143478	AGUGGUU	AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6
hg18_v1_chr2_+_111594921_111594995	0.143185	AGUGGUU	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)	BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)
hg18_v1_chr12_-_78853365_78853365	0.142585	AGUGGUU	AF458589|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A	BC092481|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_001143885|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A
hg18_v1_chr17_-_36436979_36437005	0.142225	AGUGGUU	AJ406928|KRTAP1-5|83895|keratin associated protein 1-5	BC069533|KRTAP1-5|83895|keratin associated protein 1-5	NM_031957|KRTAP1-5|83895|keratin associated protein 1-5	BC093841|KRTAP1-5|83895|keratin associated protein 1-5	BC101555|KRTAP1-5|83895|keratin associated protein 1-5
hg18_v1_chr11_-_61341011_61341104	0.142197	AGUGGUU	CR591980|FADS1|3992|fatty acid desaturase 1	AK074754|FADS1|3992|fatty acid desaturase 1	AK074819|FADS1|3992|fatty acid desaturase 1	NM_013402|FADS1|3992|fatty acid desaturase 1
hg18_v1_chr2_-_225158349_225158379	0.140952	AGUGGUU	NM_003590|CUL3|8452|cullin 3
hg18_v1_chr1_-_33108876_33109138	0.13853	AGUGGUU	BX537781|FNDC5|252995|fibronectin type III domain containing 5	AK092102|FNDC5|252995|fibronectin type III domain containing 5	NM_001171940|FNDC5|252995|fibronectin type III domain containing 5	NM_153756|FNDC5|252995|fibronectin type III domain containing 5
hg18_v1_chr1_+_78243181_78243223	0.138018	AGUGGUU	U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	CR604945|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg18_v1_chr7_+_86812864_86812997	0.135813	AGUGGUU	NM_001143935|CROT|54677|carnitine O-octanoyltransferase	NM_021151|CROT|54677|carnitine O-octanoyltransferase	AK127901|CROT|54677|carnitine O-octanoyltransferase	AK313487|CROT|54677|carnitine O-octanoyltransferase	BC051874|CROT|54677|carnitine O-octanoyltransferase	BC039004|CROT|54677|carnitine O-octanoyltransferase	BC012483|CROT|54677|carnitine O-octanoyltransferase	BC019226|CROT|54677|carnitine O-octanoyltransferase	AF073770|CROT|54677|carnitine O-octanoyltransferase	AF168793|CROT|54677|carnitine O-octanoyltransferase
hg18_v1_chr19_+_2427122_2427355	0.135684	AGUGGUU	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta	AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta
hg18_v1_chr2_+_208284484_208284609	0.135113	AGUGGUU	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr1_-_42574116_42574166	0.134583	AGUGGUU	AK027075|FOXJ3|22887|forkhead box J3	NM_001198850|FOXJ3|22887|forkhead box J3
hg18_v1_chr2_+_26110232_26110484	0.134171	AGUGGUU	NM_016131|RAB10|10890|RAB10, member RAS oncogene family	CR606383|RAB10|10890|RAB10, member RAS oncogene family	AL136650|RAB10|10890|RAB10, member RAS oncogene family	AK023223|RAB10|10890|RAB10, member RAS oncogene family
hg18_v1_chr2_-_177838104_177838104	0.133541	AGUGGUU	AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2
hg18_v1_chrX_+_70502838_70502904	0.131366	AGUGGUU	D90359|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa	NM_004606|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa	NM_138923|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa	AK310201|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa	AB300418|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
hg18_v1_chr7_+_107171514_107171514	0.128853	AGUGGUU	AK293352|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1	NM_024814|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1
hg18_v1_chr10_+_101409159_101409290	0.12704	AGUGGUU	AK314542|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7	AK055540|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7	AK309735|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7	NM_020354|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7	BC119008|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7	BC122857|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7	AF269255|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7
hg18_v1_chr8_-_95976599_95976657	0.126076	AGUGGUU	BC007015|CCNE2|9134|cyclin E2	BC020729|CCNE2|9134|cyclin E2	NM_057749|CCNE2|9134|cyclin E2
hg18_v1_chr12_-_45052830_45052911	0.125517	AGUGGUU	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg18_v1_chr12_-_10657397_10657476	0.125477	AGUGGUU	CR604359|MAGOHB|55110|mago-nashi homolog B (Drosophila)	BC010905|MAGOHB|55110|mago-nashi homolog B (Drosophila)	AK022720|MAGOHB|55110|mago-nashi homolog B (Drosophila)	AK001154|MAGOHB|55110|mago-nashi homolog B (Drosophila)	AK096106|MAGOHB|55110|mago-nashi homolog B (Drosophila)	AF165518|MAGOHB|55110|mago-nashi homolog B (Drosophila)	NM_018048|MAGOHB|55110|mago-nashi homolog B (Drosophila)
hg18_v1_chr21_-_41479035_41479035	0.125383	AGUGGUU	AK092431|PLAC4|191585|placenta-specific 4	NM_182832|PLAC4|191585|placenta-specific 4
hg18_v1_chr18_-_22699650_22699717	0.125059	AGUGGUU	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4
hg18_v1_chr1_-_20685314_20685423	0.124371	AGUGGUU	NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg18_v1_chr6_+_80771040_80771102	0.124153	AGUGGUU	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg18_v1_chr13_-_94751573_94751853	0.123601	AGUGGUU	AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
hg18_v1_chr12_+_61146798_61146895	0.120367	AGUGGUU	NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)	BX537415|MON2|23041|MON2 homolog (S. cerevisiae)	AL833066|MON2|23041|MON2 homolog (S. cerevisiae)	AK123842|MON2|23041|MON2 homolog (S. cerevisiae)	BC065289|MON2|23041|MON2 homolog (S. cerevisiae)	BC136621|MON2|23041|MON2 homolog (S. cerevisiae)	BC144309|MON2|23041|MON2 homolog (S. cerevisiae)	BC144324|MON2|23041|MON2 homolog (S. cerevisiae)	AB028963|MON2|23041|MON2 homolog (S. cerevisiae)	BC141817|MON2|23041|MON2 homolog (S. cerevisiae)	BC142710|MON2|23041|MON2 homolog (S. cerevisiae)	BC151241|MON2|23041|MON2 homolog (S. cerevisiae)
hg18_v1_chr2_+_28828112_28828244	0.120031	AGUGGUU	AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR601128|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme
hg18_v1_chrX_+_106955737_106955782	0.11961	AGUGGUU	NM_012216|MID2|11043|midline 2	NM_052817|MID2|11043|midline 2
hg18_v1_chr3_+_29297806_29298130	0.117588	AGUGGUU	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3
hg18_v1_chr4_+_113958652_113958849	0.117004	AGUGGUU	AK095596|ANK2|287|ankyrin 2, neuronal	NM_001127493|ANK2|287|ankyrin 2, neuronal	AK299815|ANK2|287|ankyrin 2, neuronal	BX537758|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr22_-_37044034_37044034	0.116872	AGUGGUU	AB024597|CSNK1E|1454|casein kinase 1, epsilon	NM_001894|CSNK1E|1454|casein kinase 1, epsilon
hg18_v1_chr17_-_53950191_53950293	0.116663	AGUGGUU	AF264717|MTMR4|9110|myotubularin related protein 4	BC035609|MTMR4|9110|myotubularin related protein 4	NM_004687|MTMR4|9110|myotubularin related protein 4
hg18_v1_chr18_-_55177430_55177488	0.116044	AGUGGUU	CR625542|LMAN1|3998|lectin, mannose-binding, 1	DQ891254|LMAN1|3998|lectin, mannose-binding, 1	DQ894440|LMAN1|3998|lectin, mannose-binding, 1	U09716|LMAN1|3998|lectin, mannose-binding, 1	AK223208|LMAN1|3998|lectin, mannose-binding, 1	AK225108|LMAN1|3998|lectin, mannose-binding, 1	AK312869|LMAN1|3998|lectin, mannose-binding, 1	BC008401|LMAN1|3998|lectin, mannose-binding, 1	CR609154|LMAN1|3998|lectin, mannose-binding, 1	BC032330|LMAN1|3998|lectin, mannose-binding, 1	CR618370|LMAN1|3998|lectin, mannose-binding, 1	BC017858|LMAN1|3998|lectin, mannose-binding, 1	X71661|LMAN1|3998|lectin, mannose-binding, 1	AK301244|LMAN1|3998|lectin, mannose-binding, 1	CR592087|LMAN1|3998|lectin, mannose-binding, 1	NM_005570|LMAN1|3998|lectin, mannose-binding, 1
hg18_v1_chr1_+_87152905_87152977	0.113834	AGUGGUU	BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1
hg18_v1_chr5_-_53642144_53642174	0.113367	AGUGGUU	AK000058|ARL15|54622|ADP-ribosylation factor-like 15	AK290886|ARL15|54622|ADP-ribosylation factor-like 15	BC026093|ARL15|54622|ADP-ribosylation factor-like 15	NM_019087|ARL15|54622|ADP-ribosylation factor-like 15	AK311482|ARL15|54622|ADP-ribosylation factor-like 15
hg18_v1_chr20_+_18516541_18516759	0.112948	AGUGGUU	NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)	AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)
hg18_v1_chr3_-_126414252_126414298	0.112931	AGUGGUU	AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr22_-_49260136_49260372	0.110895	AGUGGUU	EU831421|SBF1|6305|SET binding factor 1	EU831514|SBF1|6305|SET binding factor 1	BC087612|SBF1|6305|SET binding factor 1	BC040031|SBF1|6305|SET binding factor 1	AK057985|SBF1|6305|SET binding factor 1	NM_002972|SBF1|6305|SET binding factor 1
hg18_v1_chr17_+_18625243_18625351	0.109746	AGUGGUU	CR611241|FAM18B1|51030|family with sequence similarity 18, member B1	BC008430|FAM18B1|51030|family with sequence similarity 18, member B1	NM_016078|FAM18B1|51030|family with sequence similarity 18, member B1	AK290813|FAM18B1|51030|family with sequence similarity 18, member B1	BX537929|FAM18B1|51030|family with sequence similarity 18, member B1	BX648167|FAM18B1|51030|family with sequence similarity 18, member B1
hg18_v1_chr16_+_82399073_82399130	0.108999	AGUGGUU	CR608180|HSBP1|3281|heat shock factor binding protein 1	NM_001537|HSBP1|3281|heat shock factor binding protein 1	CR617031|HSBP1|3281|heat shock factor binding protein 1	CR606398|HSBP1|3281|heat shock factor binding protein 1	BX537440|HSBP1|3281|heat shock factor binding protein 1	CR626207|HSBP1|3281|heat shock factor binding protein 1	BX648972|HSBP1|3281|heat shock factor binding protein 1	AF068754|HSBP1|3281|heat shock factor binding protein 1	CR603985|HSBP1|3281|heat shock factor binding protein 1	CR605356|HSBP1|3281|heat shock factor binding protein 1
hg18_v1_chr16_+_66153810_66153980	0.108191	AGUGGUU	AK314804|CTCF|10664|CCCTC-binding factor (zinc finger protein)	NM_001191022|CTCF|10664|CCCTC-binding factor (zinc finger protein)	NM_006565|CTCF|10664|CCCTC-binding factor (zinc finger protein)	U25435|CTCF|10664|CCCTC-binding factor (zinc finger protein)	AB209793|CTCF|10664|CCCTC-binding factor (zinc finger protein)	BC014267|CTCF|10664|CCCTC-binding factor (zinc finger protein)
hg18_v1_chr1_-_44269719_44269733	0.107864	AGUGGUU	AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg18_v1_chr17_-_7173179_7173643	0.107564	AGUGGUU	AL136870|NEURL4|84461|neuralized homolog 4 (Drosophila)	AB058690|NEURL4|84461|neuralized homolog 4 (Drosophila)	NM_001005408|NEURL4|84461|neuralized homolog 4 (Drosophila)	NM_032442|NEURL4|84461|neuralized homolog 4 (Drosophila)	AL833570|NEURL4|84461|neuralized homolog 4 (Drosophila)
hg18_v1_chr4_+_123967265_123967323	0.106786	AGUGGUU	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg18_v1_chr3_+_33293915_33293993	0.106028	AGUGGUU	AK001271|FBXL2|25827|F-box and leucine-rich repeat protein 2	NM_012157|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK302218|FBXL2|25827|F-box and leucine-rich repeat protein 2	NM_001171713|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK303764|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK299665|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK294209|FBXL2|25827|F-box and leucine-rich repeat protein 2	AF174589|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK316229|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK001438|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK298967|FBXL2|25827|F-box and leucine-rich repeat protein 2	AK297534|FBXL2|25827|F-box and leucine-rich repeat protein 2	AF186273|FBXL2|25827|F-box and leucine-rich repeat protein 2	BC031556|FBXL2|25827|F-box and leucine-rich repeat protein 2
hg18_v1_chr2_+_28971007_28971085	0.104019	AGUGGUU	NM_015131|WDR43|23160|WD repeat domain 43	D26488|WDR43|23160|WD repeat domain 43	CR618449|WDR43|23160|WD repeat domain 43	CR612320|WDR43|23160|WD repeat domain 43
hg18_v1_chrX_+_152252738_152252868	0.103545	AGUGGUU	AK122976|ZNF275|10838|zinc finger protein 275	NM_001080485|ZNF275|10838|zinc finger protein 275
hg18_v1_chrX_-_63342209_63342394	0.103371	AGUGGUU	EF186024|FAM123B|139285|family with sequence similarity 123B	AK097146|FAM123B|139285|family with sequence similarity 123B	NM_152424|FAM123B|139285|family with sequence similarity 123B
hg18_v1_chr6_+_43845915_43846077	0.102095	AGUGGUU	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr16_-_88410523_88410570	0.10202	AGUGGUU	BT007366|FANCA|2175|Fanconi anemia, complementation group A	CR601931|FANCA|2175|Fanconi anemia, complementation group A	CR612784|FANCA|2175|Fanconi anemia, complementation group A	AK299282|FANCA|2175|Fanconi anemia, complementation group A	X99226|FANCA|2175|Fanconi anemia, complementation group A	BC022498|FANCA|2175|Fanconi anemia, complementation group A	BC008979|FANCA|2175|Fanconi anemia, complementation group A	BC120979|FANCA|2175|Fanconi anemia, complementation group A	BC127633|FANCA|2175|Fanconi anemia, complementation group A	BC064540|FANCA|2175|Fanconi anemia, complementation group A	BC120978|FANCA|2175|Fanconi anemia, complementation group A	BC141971|FANCA|2175|Fanconi anemia, complementation group A	BC141972|FANCA|2175|Fanconi anemia, complementation group A	NM_000135|FANCA|2175|Fanconi anemia, complementation group A	NM_001018112|FANCA|2175|Fanconi anemia, complementation group A
hg18_v1_chr4_-_152366970_152367109	0.100041	AGUGGUU	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr3_-_173911467_173911701	0.0988015	AGUGGUU	AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1	AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1	AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1	BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1	AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1	AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1	AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1	BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1	NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1	NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1	NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1	NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1
hg18_v1_chr11_+_116520181_116520306	0.0969343	AGUGGUU	NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	CR603284|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
hg18_v1_chr15_-_81667169_81667668	0.096432	AGUGGUU	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr7_+_21434097_21434591	0.0962375	AGUGGUU	AK289728|SP4|6671|Sp4 transcription factor	AK296749|SP4|6671|Sp4 transcription factor	NM_003112|SP4|6671|Sp4 transcription factor	X68561|SP4|6671|Sp4 transcription factor	BC109300|SP4|6671|Sp4 transcription factor	BC109301|SP4|6671|Sp4 transcription factor
hg18_v1_chr3_-_9266251_9266385	0.0961737	AGUGGUU	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3
hg18_v1_chr7_-_132417237_132417371	0.0957033	AGUGGUU	AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	CR619969|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	CR590478|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	CR592685|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	CR601305|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	CR603574|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3
hg18_v1_chr19_+_10574055_10574212	0.0954303	AGUGGUU	NM_001145056|SLC44A2|57153|solute carrier family 44, member 2	AK309801|SLC44A2|57153|solute carrier family 44, member 2	AK027519|SLC44A2|57153|solute carrier family 44, member 2
hg18_v1_chr20_-_31771550_31771800	0.0952615	AGUGGUU	CR533471|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	EU832287|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	EU832372|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	BC001147|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK023879|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AF072864|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AL136648|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK301532|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK316589|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK297018|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	NM_007238|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	NM_183397|PXMP4|11264|peroxisomal membrane protein 4, 24kDa
hg18_v1_chr2_+_10180304_10180376	0.0951449	AGUGGUU	CR596700|RRM2|6241|ribonucleotide reductase M2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	CR604378|RRM2|6241|ribonucleotide reductase M2	CR625489|RRM2|6241|ribonucleotide reductase M2	CR602150|RRM2|6241|ribonucleotide reductase M2	CR609838|RRM2|6241|ribonucleotide reductase M2	CR621427|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	CR614990|RRM2|6241|ribonucleotide reductase M2	CR590959|RRM2|6241|ribonucleotide reductase M2	CR618451|RRM2|6241|ribonucleotide reductase M2	CR603461|RRM2|6241|ribonucleotide reductase M2	CR602054|RRM2|6241|ribonucleotide reductase M2	CR608076|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr16_-_15889947_15889962	0.0945507	AGUGGUU	AK055715|C16orf63|123811|chromosome 16 open reading frame 63	NM_144600|C16orf63|123811|chromosome 16 open reading frame 63	BC022321|C16orf63|123811|chromosome 16 open reading frame 63	AK056798|C16orf63|123811|chromosome 16 open reading frame 63	AY507846|C16orf63|123811|chromosome 16 open reading frame 63
hg18_v1_chr12_-_27058599_27058605	0.0941725	AGUGGUU	NM_016551|TM7SF3|51768|transmembrane 7 superfamily member 3
hg18_v1_chr6_+_26070957_26071068	0.0927932	AGUGGUU	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg18_v1_chr3_-_42598403_42598523	0.0927532	AGUGGUU	CR606001|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	CR600923|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	BC006178|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	BC018437|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_004206|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_032970|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AY359041|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	CR615911|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	CR597095|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	CR621586|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	CR600018|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK292856|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK293133|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK074576|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
hg18_v1_chr14_-_91576037_91576170	0.0921806	AGUGGUU	BC146845|TRIP11|9321|thyroid hormone receptor interactor 11	AF007217|TRIP11|9321|thyroid hormone receptor interactor 11	BC002656|TRIP11|9321|thyroid hormone receptor interactor 11	BC069008|TRIP11|9321|thyroid hormone receptor interactor 11	Y12490|TRIP11|9321|thyroid hormone receptor interactor 11	AK307489|TRIP11|9321|thyroid hormone receptor interactor 11	NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11
hg18_v1_chr17_+_34115383_34115450	0.0915516	AGUGGUU	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg18_v1_chr1_+_25537372_25537471	0.0912779	AGUGGUU	CR596941|TMEM50A|23585|transmembrane protein 50A	AK311092|TMEM50A|23585|transmembrane protein 50A	AF087880|TMEM50A|23585|transmembrane protein 50A	AL136627|TMEM50A|23585|transmembrane protein 50A	NM_014313|TMEM50A|23585|transmembrane protein 50A	AK299180|TMEM50A|23585|transmembrane protein 50A	AK311355|TMEM50A|23585|transmembrane protein 50A	AK312588|TMEM50A|23585|transmembrane protein 50A	AY358650|TMEM50A|23585|transmembrane protein 50A	AY071927|TMEM50A|23585|transmembrane protein 50A	BC007341|TMEM50A|23585|transmembrane protein 50A	BC066908|TMEM50A|23585|transmembrane protein 50A	CR592818|TMEM50A|23585|transmembrane protein 50A	AF081282|TMEM50A|23585|transmembrane protein 50A
hg18_v1_chr3_+_161601040_161601076	0.090018	AGUGGUU	NM_005496|SMC4|10051|structural maintenance of chromosomes 4	AL136877|SMC4|10051|structural maintenance of chromosomes 4
hg18_v1_chr8_-_101384633_101384662	0.0900118	AGUGGUU	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr4_+_109072120_109072222	0.0898696	AGUGGUU	AK304724|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	AK290002|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	NM_183075|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	BC012027|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	BC132767|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	BC136483|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	BC144148|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	AY343323|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	AK303284|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1
hg18_v1_chr3_+_113061218_113061292	0.087847	AGUGGUU	NM_001134439|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	BC038806|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg18_v1_chr15_-_38118608_38118680	0.0875655	AGUGGUU	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR620250|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610442|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR596116|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR610388|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	CR614758|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg18_v1_chr1_-_19155360_19155412	0.0872829	AGUGGUU	NM_001136265|IFFO2|126917|intermediate filament family orphan 2
hg18_v1_chr1_+_144181864_144181886	0.0869298	AGUGGUU	AK128050|ANKRD34A|284615|ankyrin repeat domain 34A	NM_001039888|ANKRD34A|284615|ankyrin repeat domain 34A
hg18_v1_chr7_-_29996429_29996429	0.0848007	AGUGGUU	AK295172|SCRN1|9805|secernin 1	NM_001145514|SCRN1|9805|secernin 1
hg18_v1_chr3_+_113060716_113060806	0.0846495	AGUGGUU	NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2
hg18_v1_chr6_+_20510019_20510145	0.0844406	AGUGGUU	BC099908|E2F3|1871|E2F transcription factor 3	NM_001949|E2F3|1871|E2F transcription factor 3	CR597993|E2F3|1871|E2F transcription factor 3
hg18_v1_chr13_-_109757442_109757578	0.0841575	AGUGGUU	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	CR593711|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr1_+_178190493_178190563	0.084018	AGUGGUU	AK095601|CEP350|9857|centrosomal protein 350kDa	NM_014810|CEP350|9857|centrosomal protein 350kDa
hg18_v1_chr6_+_7535404_7535513	0.0825497	AGUGGUU	AL832462|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	NM_152551|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	AK292409|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	AK056796|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC054008|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC114631|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC114630|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)	BC062458|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)
hg18_v1_chr5_-_9599157_9599232	0.082188	AGUGGUU	U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg18_v1_chr2_+_136005423_136005638	0.0820432	AGUGGUU	BC001217|R3HDM1|23518|R3H domain containing 1	D21852|R3HDM1|23518|R3H domain containing 1	BC041093|R3HDM1|23518|R3H domain containing 1	NM_015361|R3HDM1|23518|R3H domain containing 1
hg18_v1_chr22_-_37043330_37043390	0.0798337	AGUGGUU	NM_152221|CSNK1E|1454|casein kinase 1, epsilon	CR617099|CSNK1E|1454|casein kinase 1, epsilon	CR622296|CSNK1E|1454|casein kinase 1, epsilon	CR592492|CSNK1E|1454|casein kinase 1, epsilon	CR599035|CSNK1E|1454|casein kinase 1, epsilon	CR618521|CSNK1E|1454|casein kinase 1, epsilon
hg18_v1_chr3_-_197293394_197293433	0.0795504	AGUGGUU	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)
hg18_v1_chr4_-_84625241_84625355	0.0794303	AGUGGUU	BC016905|FAM175A|84142|family with sequence similarity 175, member A	EF531340|FAM175A|84142|family with sequence similarity 175, member A	BC039573|FAM175A|84142|family with sequence similarity 175, member A	AY358576|FAM175A|84142|family with sequence similarity 175, member A	AK022704|FAM175A|84142|family with sequence similarity 175, member A	AK023676|FAM175A|84142|family with sequence similarity 175, member A	NM_139076|FAM175A|84142|family with sequence similarity 175, member A
hg18_v1_chr10_+_98582648_98582788	0.0786748	AGUGGUU	NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor	AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor	AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr6_-_97837772_97837851	0.0772323	AGUGGUU	AK128060|MMS22L|253714|MMS22-like, DNA repair protein	NM_198468|MMS22L|253714|MMS22-like, DNA repair protein	BC142948|MMS22L|253714|MMS22-like, DNA repair protein	CR749822|MMS22L|253714|MMS22-like, DNA repair protein
hg18_v1_chr3_-_197293355_197293361	0.0769151	AGUGGUU	AK291723|TFRC|7037|transferrin receptor (p90, CD71)	AK309923|TFRC|7037|transferrin receptor (p90, CD71)	BX537966|TFRC|7037|transferrin receptor (p90, CD71)	NM_003234|TFRC|7037|transferrin receptor (p90, CD71)	AK294758|TFRC|7037|transferrin receptor (p90, CD71)
hg18_v1_chrX_+_46967360_46967360	0.0768253	AGUGGUU	AK301832|CDK16|5127|cyclin-dependent kinase 16	NM_001170460|CDK16|5127|cyclin-dependent kinase 16
hg18_v1_chr10_-_3817418_3817601	0.0748875	AGUGGUU	NM_001160124|KLF6|1316|Kruppel-like factor 6	NM_001160125|KLF6|1316|Kruppel-like factor 6	NM_001300|KLF6|1316|Kruppel-like factor 6
hg18_v1_chr12_-_54869568_54869661	0.0741112	AGUGGUU	AB209006|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001130420|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_003075|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_139067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg18_v1_chr7_+_2638108_2638150	0.0738225	AGUGGUU	NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)	AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)	BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)
hg18_v1_chr14_-_49848538_49848723	0.0728329	AGUGGUU	AY757363|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase	BC006117|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase	AK309294|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase	AK022680|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase	AK292627|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase	NM_024884|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase
hg18_v1_chr17_-_32840875_32841101	0.0710826	AGUGGUU	AK308905|ACACA|31|acetyl-CoA carboxylase alpha	AY315623|ACACA|31|acetyl-CoA carboxylase alpha	AY315625|ACACA|31|acetyl-CoA carboxylase alpha	AY315626|ACACA|31|acetyl-CoA carboxylase alpha	NM_198834|ACACA|31|acetyl-CoA carboxylase alpha	NM_198839|ACACA|31|acetyl-CoA carboxylase alpha
hg18_v1_chr9_+_100907222_100907236	0.0710327	AGUGGUU	L11695|TGFBR1|7046|transforming growth factor, beta receptor 1	NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1	NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1
hg18_v1_chr1_-_220952276_220952494	0.0700232	AGUGGUU	AL833718|AIDA|64853|axin interactor, dorsalization associated	BC015535|AIDA|64853|axin interactor, dorsalization associated	BC067805|AIDA|64853|axin interactor, dorsalization associated	AK289865|AIDA|64853|axin interactor, dorsalization associated	AK022868|AIDA|64853|axin interactor, dorsalization associated	BC171848|AIDA|64853|axin interactor, dorsalization associated	NM_022831|AIDA|64853|axin interactor, dorsalization associated
hg18_v1_chr17_-_24940728_24940737	0.0692468	AGUGGUU	BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1	NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1	NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1
hg18_v1_chr14_-_99140195_99140479	0.0690412	AGUGGUU	NM_001144995|CCDC85C|317762|coiled-coil domain containing 85C
hg18_v1_chr15_-_54544531_54544626	0.0684983	AGUGGUU	BC031046|MNS1|55329|meiosis-specific nuclear structural 1	BC012554|MNS1|55329|meiosis-specific nuclear structural 1	BC034991|MNS1|55329|meiosis-specific nuclear structural 1	AK002084|MNS1|55329|meiosis-specific nuclear structural 1	NM_018365|MNS1|55329|meiosis-specific nuclear structural 1
hg18_v1_chr1_-_227761038_227761065	0.0678668	AGUGGUU	AB013380|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10	BC064930|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10	AF216833|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10	NM_012089|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10
hg18_v1_chr1_-_145110669_145110763	0.0668986	AGUGGUU	AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit
hg18_v1_chr4_-_113426332_113426568	0.0664653	AGUGGUU	CR623539|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	CR599623|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain
hg18_v1_chr16_-_2204776_2204857	0.0660436	AGUGGUU	CR606733|PGP|283871|phosphoglycolate phosphatase	BC035985|PGP|283871|phosphoglycolate phosphatase	CR607189|PGP|283871|phosphoglycolate phosphatase	NM_001042371|PGP|283871|phosphoglycolate phosphatase
hg18_v1_chr1_-_22342001_22342196	0.0656063	AGUGGUU	AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4	BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4	AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4	AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4	AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4	NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4	BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4
hg18_v1_chr7_+_120378052_120378182	0.0653639	AGUGGUU	AK000096|ING3|54556|inhibitor of growth family, member 3	NM_019071|ING3|54556|inhibitor of growth family, member 3	NM_198267|ING3|54556|inhibitor of growth family, member 3	AF161419|ING3|54556|inhibitor of growth family, member 3	BC009777|ING3|54556|inhibitor of growth family, member 3	BC093091|ING3|54556|inhibitor of growth family, member 3	AY007790|ING3|54556|inhibitor of growth family, member 3	AK291905|ING3|54556|inhibitor of growth family, member 3	AF074968|ING3|54556|inhibitor of growth family, member 3	BC073865|ING3|54556|inhibitor of growth family, member 3	AF180298|ING3|54556|inhibitor of growth family, member 3	BC062634|ING3|54556|inhibitor of growth family, member 3	BC093689|ING3|54556|inhibitor of growth family, member 3	BC101609|ING3|54556|inhibitor of growth family, member 3	BC143316|ING3|54556|inhibitor of growth family, member 3	BC009776|ING3|54556|inhibitor of growth family, member 3	BC010851|ING3|54556|inhibitor of growth family, member 3	CR598359|ING3|54556|inhibitor of growth family, member 3	CR618547|ING3|54556|inhibitor of growth family, member 3	BC146417|ING3|54556|inhibitor of growth family, member 3	BC153171|ING3|54556|inhibitor of growth family, member 3
hg18_v1_chr22_-_17303963_17304065	0.064663	AGUGGUU	BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1	BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1	NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1	NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1	U79754|PRODH|5625|proline dehydrogenase (oxidase) 1
hg18_v1_chr11_-_6459139_6459251	0.0642374	AGUGGUU	AK300855|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	CR597929|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	AK304512|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	NM_012402|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	AK301856|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	AK301972|ARFIP2|23647|ADP-ribosylation factor interacting protein 2
hg18_v1_chr14_+_56116243_56116354	0.0637978	AGUGGUU	AK056291|C14orf101|54916|chromosome 14 open reading frame 101	NM_017799|C14orf101|54916|chromosome 14 open reading frame 101	BC045556|C14orf101|54916|chromosome 14 open reading frame 101	AK293099|C14orf101|54916|chromosome 14 open reading frame 101	AK295989|C14orf101|54916|chromosome 14 open reading frame 101	AK309920|C14orf101|54916|chromosome 14 open reading frame 101	BC008949|C14orf101|54916|chromosome 14 open reading frame 101	BC023579|C14orf101|54916|chromosome 14 open reading frame 101	BC121163|C14orf101|54916|chromosome 14 open reading frame 101	BC121164|C14orf101|54916|chromosome 14 open reading frame 101
hg18_v1_chr20_+_60130866_60130952	0.061995	AGUGGUU	BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	CR618201|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)
hg18_v1_chr20_+_4650499_4650570	0.0616449	AGUGGUU	AK313404|PRND|23627|prion protein 2 (dublet)	BC043644|PRND|23627|prion protein 2 (dublet)	NM_012409|PRND|23627|prion protein 2 (dublet)	AF187843|PRND|23627|prion protein 2 (dublet)	AY358985|PRND|23627|prion protein 2 (dublet)
hg18_v1_chr20_-_33716275_33716305	0.0613079	AGUGGUU	NM_001198838|RBM12|10137|RNA binding motif protein 12	NM_001198840|RBM12|10137|RNA binding motif protein 12	NM_001198863|CPNE1|8904|copine I	NM_006047|RBM12|10137|RNA binding motif protein 12	NM_152838|RBM12|10137|RNA binding motif protein 12	NM_152925|CPNE1|8904|copine I	NM_152926|CPNE1|8904|copine I	NM_152927|CPNE1|8904|copine I	NM_152928|CPNE1|8904|copine I
hg18_v1_chr1_-_28287658_28287764	0.0610848	AGUGGUU	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)	AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)	BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)	BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)	NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)	AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)	AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)	AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)
hg18_v1_chr2_+_171998988_171999029	0.0600812	AGUGGUU	AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17	NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17	NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17
hg18_v1_chr7_-_98579617_98579753	0.0599472	AGUGGUU	AB046845|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	BC152468|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	NM_020429|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	NM_181349|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1
hg18_v1_chr8_+_141590547_141590602	0.0597096	AGUGGUU	NM_017444|CHRAC1|54108|chromatin accessibility complex 1	AK023537|CHRAC1|54108|chromatin accessibility complex 1
hg18_v1_chr14_+_52266602_52266652	0.0593373	AGUGGUU	NM_001130701|STYX|6815|serine/threonine/tyrosine interacting protein	NM_145251|STYX|6815|serine/threonine/tyrosine interacting protein	AL832591|STYX|6815|serine/threonine/tyrosine interacting protein	AK098195|STYX|6815|serine/threonine/tyrosine interacting protein
hg18_v1_chr22_+_36412277_36412366	0.0592308	AGUGGUU	NM_024313|NOL12|79159|nucleolar protein 12	CR601334|NOL12|79159|nucleolar protein 12	AK057139|NOL12|79159|nucleolar protein 12	AK294700|NOL12|79159|nucleolar protein 12	AK316443|NOL12|79159|nucleolar protein 12	BC002808|NOL12|79159|nucleolar protein 12	AL160132|NOL12|79159|nucleolar protein 12	CR456463|NOL12|79159|nucleolar protein 12
hg18_v1_chr17_+_4657352_4657454	0.0590534	AGUGGUU	NM_002663|PLD2|5338|phospholipase D2	BC015033|PLD2|5338|phospholipase D2	AK304246|PLD2|5338|phospholipase D2	AK314797|PLD2|5338|phospholipase D2	BC056871|PLD2|5338|phospholipase D2
hg18_v1_chr12_-_116283793_116283989	0.0581354	AGUGGUU	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)	AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)	EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)	U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)	AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)	NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)
hg18_v1_chr3_-_197643701_197643760	0.0580279	AGUGGUU	NM_015562|UBXN7|26043|UBX domain protein 7
hg18_v1_chr5_-_34951470_34951536	0.0579924	AGUGGUU	AK002112|RAD1|5810|RAD1 homolog (S. pombe)	NM_002853|RAD1|5810|RAD1 homolog (S. pombe)
hg18_v1_chr20_-_57940567_57940603	0.0564958	AGUGGUU	BC132864|SYCP2|10388|synaptonemal complex protein 2	BC132870|SYCP2|10388|synaptonemal complex protein 2	NM_014258|SYCP2|10388|synaptonemal complex protein 2
hg18_v1_chr10_+_102662315_102662315	0.0560415	AGUGGUU	AF460991|FAM178A|55719|family with sequence similarity 178, member A	AF460992|FAM178A|55719|family with sequence similarity 178, member A	NM_001136123|FAM178A|55719|family with sequence similarity 178, member A	NM_018121|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chr1_+_24614831_24614950	0.0553643	AGUGGUU	NM_020448|NIPAL3|57185|NIPA-like domain containing 3	CR626180|NIPAL3|57185|NIPA-like domain containing 3	AK312433|NIPAL3|57185|NIPA-like domain containing 3	BX640883|NIPAL3|57185|NIPA-like domain containing 3	CR601331|NIPAL3|57185|NIPA-like domain containing 3	BC012492|NIPAL3|57185|NIPA-like domain containing 3	BC001265|NIPAL3|57185|NIPA-like domain containing 3	CR597336|NIPAL3|57185|NIPA-like domain containing 3	BC063583|NIPAL3|57185|NIPA-like domain containing 3	U90918|NIPAL3|57185|NIPA-like domain containing 3
hg18_v1_chr8_+_81560971_81561107	0.0541688	AGUGGUU	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10	BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10
hg18_v1_chr11_-_10787157_10787248	0.0540933	AGUGGUU	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg18_v1_chr11_+_64705855_64705928	0.0532902	AGUGGUU	NM_001198870|CAPN1|823|calpain 1, (mu/I) large subunit	NM_005186|CAPN1|823|calpain 1, (mu/I) large subunit	X04366|CAPN1|823|calpain 1, (mu/I) large subunit	BC008751|CAPN1|823|calpain 1, (mu/I) large subunit
hg18_v1_chr2_-_60633908_60634145	0.0522608	AGUGGUU	AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)
hg18_v1_chr7_-_106088565_106088914	0.052182	AGUGGUU	AK093350|FLJ36031|168455|hypothetical protein FLJ36031	BC013906|FLJ36031|168455|hypothetical protein FLJ36031	NM_175884|FLJ36031|168455|hypothetical protein FLJ36031
hg18_v1_chr1_-_173428455_173428851	0.0517325	AGUGGUU	D25539|KIAA0040|9674|KIAA0040	BC032361|KIAA0040|9674|KIAA0040	BC111699|KIAA0040|9674|KIAA0040	BC050374|KIAA0040|9674|KIAA0040	BC020789|KIAA0040|9674|KIAA0040	AL049799|KIAA0040|9674|KIAA0040	AK292691|KIAA0040|9674|KIAA0040	NM_001162895|KIAA0040|9674|KIAA0040	NM_014656|KIAA0040|9674|KIAA0040	AL049800|KIAA0040|9674|KIAA0040	CR625052|KIAA0040|9674|KIAA0040	NM_001162893|KIAA0040|9674|KIAA0040	NM_001162894|KIAA0040|9674|KIAA0040
hg18_v1_chr14_-_94855848_94856025	0.0514735	AGUGGUU	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)	AK025226|CLMN|79789|calmin (calponin-like, transmembrane)	BC068482|CLMN|79789|calmin (calponin-like, transmembrane)	AB047979|CLMN|79789|calmin (calponin-like, transmembrane)	AK314315|CLMN|79789|calmin (calponin-like, transmembrane)	NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)
hg18_v1_chr10_-_15036014_15036106	0.0513755	AGUGGUU	BC108276|DCLRE1C|64421|DNA cross-link repair 1C	AK022922|DCLRE1C|64421|DNA cross-link repair 1C	BC022254|DCLRE1C|64421|DNA cross-link repair 1C	AF395747|DCLRE1C|64421|DNA cross-link repair 1C	AF395748|DCLRE1C|64421|DNA cross-link repair 1C	AF395749|DCLRE1C|64421|DNA cross-link repair 1C	AF395750|DCLRE1C|64421|DNA cross-link repair 1C	AF395751|DCLRE1C|64421|DNA cross-link repair 1C	AF395752|DCLRE1C|64421|DNA cross-link repair 1C	AJ296101|DCLRE1C|64421|DNA cross-link repair 1C	BC009185|DCLRE1C|64421|DNA cross-link repair 1C	BX648858|DCLRE1C|64421|DNA cross-link repair 1C	AK021422|DCLRE1C|64421|DNA cross-link repair 1C	AK290598|DCLRE1C|64421|DNA cross-link repair 1C	AK307912|DCLRE1C|64421|DNA cross-link repair 1C	NM_001033855|DCLRE1C|64421|DNA cross-link repair 1C	NM_001033857|DCLRE1C|64421|DNA cross-link repair 1C	NM_001033858|DCLRE1C|64421|DNA cross-link repair 1C	NM_022487|DCLRE1C|64421|DNA cross-link repair 1C
hg18_v1_chr20_+_43423990_43423990	0.05126	AGUGGUU	NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg18_v1_chr9_-_126945536_126945689	0.0485024	AGUGGUU	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg18_v1_chr14_-_88953059_88953268	0.0483284	AGUGGUU	BC007506|FOXN3|1112|forkhead box N3	NM_005197|FOXN3|1112|forkhead box N3
hg18_v1_chr2_+_114916368_114916368	0.047959	AGUGGUU	BC030832|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_020868|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chr3_-_151171190_151171444	0.0477064	AGUGGUU	CR615830|PFN2|5217|profilin 2	CR626138|PFN2|5217|profilin 2	AF228738|PFN2|5217|profilin 2	EU832616|PFN2|5217|profilin 2	EU832688|PFN2|5217|profilin 2	AK311782|PFN2|5217|profilin 2	CR600596|PFN2|5217|profilin 2	CR609496|PFN2|5217|profilin 2	L10678|PFN2|5217|profilin 2	BC002964|PFN2|5217|profilin 2	CR625431|PFN2|5217|profilin 2	CR621836|PFN2|5217|profilin 2	CR594372|PFN2|5217|profilin 2	CR596808|PFN2|5217|profilin 2	CR598650|PFN2|5217|profilin 2	CR598653|PFN2|5217|profilin 2	CR598518|PFN2|5217|profilin 2	CR618131|PFN2|5217|profilin 2	BC095444|PFN2|5217|profilin 2	AK307227|PFN2|5217|profilin 2	AK311780|PFN2|5217|profilin 2	CR591423|PFN2|5217|profilin 2	CR606080|PFN2|5217|profilin 2	CR619503|PFN2|5217|profilin 2	BC018049|PFN2|5217|profilin 2	AK297915|PFN2|5217|profilin 2	CR601974|PFN2|5217|profilin 2	NM_002628|PFN2|5217|profilin 2	NM_053024|PFN2|5217|profilin 2
hg18_v1_chr22_-_23281154_23281274	0.0472962	AGUGGUU	BC070109|C22orf13|83606|chromosome 22 open reading frame 13	NM_031444|C22orf13|83606|chromosome 22 open reading frame 13
hg18_v1_chr2_-_158193639_158193647	0.0472751	AGUGGUU	BC022530|ACVR1C|130399|activin A receptor, type IC	NM_001111032|ACVR1C|130399|activin A receptor, type IC	NM_001111033|ACVR1C|130399|activin A receptor, type IC	NM_145259|ACVR1C|130399|activin A receptor, type IC
hg18_v1_chr5_-_83052606_83052775	0.0447582	AGUGGUU	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr12_-_109665113_109665143	0.0442944	AGUGGUU	NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme
hg18_v1_chr6_-_82519093_82519168	0.0436328	AGUGGUU	AJ420592|FAM46A|55603|family with sequence similarity 46, member A	BC000683|FAM46A|55603|family with sequence similarity 46, member A	AK000044|FAM46A|55603|family with sequence similarity 46, member A	BX648876|FAM46A|55603|family with sequence similarity 46, member A	AF350451|FAM46A|55603|family with sequence similarity 46, member A	BC007351|FAM46A|55603|family with sequence similarity 46, member A	AK056057|FAM46A|55603|family with sequence similarity 46, member A	AK292109|FAM46A|55603|family with sequence similarity 46, member A	NM_017633|FAM46A|55603|family with sequence similarity 46, member A
hg18_v1_chr2_+_135392857_135392877	0.0422151	AGUGGUU	AK294889|CCNT2|905|cyclin T2	AF048731|CCNT2|905|cyclin T2	NM_001241|CCNT2|905|cyclin T2	NM_058241|CCNT2|905|cyclin T2	AK292913|CCNT2|905|cyclin T2	BC114366|CCNT2|905|cyclin T2
hg18_v1_chr20_+_43425153_43425310	0.0418277	AGUGGUU	NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR605916|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR616955|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR596680|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR623457|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR607560|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR623013|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 read-through transcript	AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR624106|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg18_v1_chr17_-_53420595_53420639	0.0405493	AGUGGUU	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr6_+_53037754_53037754	0.0398086	AGUGGUU	BC000650|FBXO9|26268|F-box protein 9	NM_033481|FBXO9|26268|F-box protein 9
hg18_v1_chr2_-_200038055_200038075	0.0384031	AGUGGUU	AB209376|SATB2|23314|SATB homeobox 2	NM_001172517|SATB2|23314|SATB homeobox 2
hg18_v1_chr6_+_57145017_57145133	0.0375215	AGUGGUU	NM_004282|BAG2|9532|BCL2-associated athanogene 2	AK001015|BAG2|9532|BCL2-associated athanogene 2	AK023735|BAG2|9532|BCL2-associated athanogene 2	CR612315|BAG2|9532|BCL2-associated athanogene 2
hg18_v1_chr1_+_15123165_15123447	0.0367751	AGUGGUU	AY505120|KAZN|23254|kazrin, periplakin interacting protein	NM_001018000|KAZN|23254|kazrin, periplakin interacting protein	BC035501|KAZN|23254|kazrin, periplakin interacting protein
hg18_v1_chr4_-_152316105_152316153	0.0361569	AGUGGUU	BC108890|SH3D19|152503|SH3 domain containing 19	BC108891|SH3D19|152503|SH3 domain containing 19	BC108892|SH3D19|152503|SH3 domain containing 19	BC108893|SH3D19|152503|SH3 domain containing 19	NM_001128924|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr11_+_64705261_64705523	0.0348455	AGUGGUU	NM_001198868|CAPN1|823|calpain 1, (mu/I) large subunit	AK315556|CAPN1|823|calpain 1, (mu/I) large subunit
hg18_v1_chr5_+_138657229_138657248	0.0348007	AGUGGUU	NM_018834|MATR3|9782|matrin 3
hg18_v1_chr17_+_35550032_35550152	0.0347251	AGUGGUU	NM_007359|CASC3|22794|cancer susceptibility candidate 3	AK292425|CASC3|22794|cancer susceptibility candidate 3	AK310635|CASC3|22794|cancer susceptibility candidate 3	AK296682|CASC3|22794|cancer susceptibility candidate 3	X80199|CASC3|22794|cancer susceptibility candidate 3	BC050526|CASC3|22794|cancer susceptibility candidate 3	BC044656|CASC3|22794|cancer susceptibility candidate 3
hg18_v1_chr1_+_45250388_45250409	0.0338584	AGUGGUU	NM_000374|UROD|7389|uroporphyrinogen decarboxylase
hg18_v1_chr6_-_7334940_7334993	0.0336912	AGUGGUU	AF414185|CAGE1|285782|cancer antigen 1	NM_001170692|CAGE1|285782|cancer antigen 1	NM_001170693|CAGE1|285782|cancer antigen 1	NM_205864|CAGE1|285782|cancer antigen 1
hg18_v1_chr1_-_149115835_149115876	0.0334457	AGUGGUU	BC028362|ARNT|405|aryl hydrocarbon receptor nuclear translocator	AK293027|ARNT|405|aryl hydrocarbon receptor nuclear translocator	NM_001197325|ARNT|405|aryl hydrocarbon receptor nuclear translocator	NM_001668|ARNT|405|aryl hydrocarbon receptor nuclear translocator	NM_178427|ARNT|405|aryl hydrocarbon receptor nuclear translocator
hg18_v1_chr10_-_116434364_116434403	0.0333897	AGUGGUU	NM_001003407|ABLIM1|3983|actin binding LIM protein 1	NM_001003408|ABLIM1|3983|actin binding LIM protein 1
hg18_v1_chrX_+_149902415_149902515	0.0332507	AGUGGUU	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chr6_+_53038181_53038380	0.0323491	AGUGGUU	CR625061|FBXO9|26268|F-box protein 9	CR603015|FBXO9|26268|F-box protein 9	AL137520|FBXO9|26268|F-box protein 9	NM_033480|FBXO9|26268|F-box protein 9
hg18_v1_chrX_-_77281764_77281834	0.0321321	AGUGGUU	DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	CR624765|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	CR625261|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg18_v1_chr12_+_39372456_39372643	0.032068	AGUGGUU	AK289698|CNTN1|1272|contactin 1	Z21488|CNTN1|1272|contactin 1	NM_001843|CNTN1|1272|contactin 1	NM_175038|CNTN1|1272|contactin 1
hg18_v1_chr9_+_111927601_111927626	0.0317846	AGUGGUU	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2	AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2
hg18_v1_chr12_-_29828958_29828958	0.0316409	AGUGGUU	BC042083|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1	NM_175861|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1
hg18_v1_chr12_-_110608153_110608206	0.0314771	AGUGGUU	CR623955|BRAP|8315|BRCA1 associated protein	NM_006768|BRAP|8315|BRCA1 associated protein
hg18_v1_chr2_-_100125402_100125468	0.0302093	AGUGGUU	BC036895|AFF3|3899|AF4/FMR2 family, member 3	NM_002285|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr10_-_104943000_104943074	0.0297323	AGUGGUU	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg18_v1_chr17_+_582406_582666	0.0295367	AGUGGUU	AF477201|FAM57A|79850|family with sequence similarity 57, member A	BC026023|FAM57A|79850|family with sequence similarity 57, member A	AK025935|FAM57A|79850|family with sequence similarity 57, member A	AK292065|FAM57A|79850|family with sequence similarity 57, member A	NM_024792|FAM57A|79850|family with sequence similarity 57, member A	AK125146|FAM57A|79850|family with sequence similarity 57, member A
hg18_v1_chrX_+_37093448_37093571	0.0294609	AGUGGUU	NM_000950|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	NM_001142395|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	NM_001173486|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	BC030786|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	BC012608|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	NM_001173489|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	NM_001173490|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	AK312904|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	BC060833|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	AF009242|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1	BC041591|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1
hg18_v1_chr1_-_153098811_153098961	0.0284012	AGUGGUU	CR595038|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr19_-_2047263_2047268	0.0280532	AGUGGUU	AK095471|MOBKL2A|126308|MOB1, Mps One Binder kinase activator-like 2A (yeast)	CR627409|MOBKL2A|126308|MOB1, Mps One Binder kinase activator-like 2A (yeast)	NM_130807|MOBKL2A|126308|MOB1, Mps One Binder kinase activator-like 2A (yeast)
hg18_v1_chr5_+_122875691_122875872	0.0277804	AGUGGUU	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3	NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3	NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3	NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3	AK299739|CSNK1G3|1456|casein kinase 1, gamma 3	AK316019|CSNK1G3|1456|casein kinase 1, gamma 3
hg18_v1_chr10_+_11099860_11099932	0.0273946	AGUGGUU	AK314087|CELF2|10659|CUGBP, Elav-like family member 2	NM_006561|CELF2|10659|CUGBP, Elav-like family member 2	BC036391|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr12_-_49853155_49853192	0.0268809	AGUGGUU	U03494|TFCP2|7024|transcription factor CP2	CR599664|TFCP2|7024|transcription factor CP2	NM_001173452|TFCP2|7024|transcription factor CP2	NM_001173453|TFCP2|7024|transcription factor CP2	NM_005653|TFCP2|7024|transcription factor CP2
hg18_v1_chr15_-_27901828_27902003	0.0265991	AGUGGUU	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)	BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)	NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)	NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)
hg18_v1_chr10_+_97793054_97793689	0.0261599	AGUGGUU	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr15_-_20637731_20637899	0.0260259	AGUGGUU	AK057846|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1	BC103705|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1	AK314073|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1	CR614719|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1	NM_144599|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1
hg18_v1_chr1_-_173259175_173259198	0.0253728	AGUGGUU	BC009788|MRPS14|63931|mitochondrial ribosomal protein S14	AK310915|MRPS14|63931|mitochondrial ribosomal protein S14	AK311759|MRPS14|63931|mitochondrial ribosomal protein S14	AL049705|MRPS14|63931|mitochondrial ribosomal protein S14	NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14
hg18_v1_chr18_-_32663082_32663155	0.0245598	AGUGGUU	BC087845|C18orf10|25941|chromosome 18 open reading frame 10	NM_015476|C18orf10|25941|chromosome 18 open reading frame 10
hg18_v1_chr7_-_138444933_138445007	0.0245253	AGUGGUU	BC025308|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	BC033105|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	BC040956|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	NM_020119|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	NM_024625|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	BX571742|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1
hg18_v1_chr2_+_208102860_208102916	0.0243727	AGUGGUU	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	CR621261|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr3_+_151609395_151609511	0.0243713	AGUGGUU	BC044643|TSC22D2|9819|TSC22 domain family, member 2	NM_014779|TSC22D2|9819|TSC22 domain family, member 2
hg18_v1_chr5_+_112340326_112340528	0.0237558	AGUGGUU	AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	CR612463|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)
hg18_v1_chr12_-_24993548_24993659	0.0235716	AGUGGUU	AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr12_-_93568336_93568454	0.0234447	AGUGGUU	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3	EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3	BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3	NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3
hg18_v1_chr13_+_107668714_107668889	0.0227865	AGUGGUU	NM_032859|ABHD13|84945|abhydrolase domain containing 13	AK075195|ABHD13|84945|abhydrolase domain containing 13	BC022566|ABHD13|84945|abhydrolase domain containing 13
hg18_v1_chr1_-_150148608_150148736	0.0227213	AGUGGUU	BC065277|THEM4|117145|thioesterase superfamily member 4	NM_053055|THEM4|117145|thioesterase superfamily member 4
hg18_v1_chr11_-_47226915_47227032	0.0225956	AGUGGUU	DQ892669|ACP2|53|acid phosphatase 2, lysosomal	DQ895913|ACP2|53|acid phosphatase 2, lysosomal	BC003160|ACP2|53|acid phosphatase 2, lysosomal	CR615614|ACP2|53|acid phosphatase 2, lysosomal	X12548|ACP2|53|acid phosphatase 2, lysosomal	AK298122|ACP2|53|acid phosphatase 2, lysosomal	AK300569|ACP2|53|acid phosphatase 2, lysosomal	AK300931|ACP2|53|acid phosphatase 2, lysosomal	AK301860|ACP2|53|acid phosphatase 2, lysosomal	AK308512|ACP2|53|acid phosphatase 2, lysosomal	BC093010|ACP2|53|acid phosphatase 2, lysosomal	AK299382|ACP2|53|acid phosphatase 2, lysosomal	AK300911|ACP2|53|acid phosphatase 2, lysosomal	AK303894|ACP2|53|acid phosphatase 2, lysosomal	AK311431|ACP2|53|acid phosphatase 2, lysosomal	NM_001131064|ACP2|53|acid phosphatase 2, lysosomal	NM_001610|ACP2|53|acid phosphatase 2, lysosomal
hg18_v1_chr5_-_49772973_49773028	0.0217519	AGUGGUU	NM_198449|EMB|133418|embigin
hg18_v1_chr10_+_31648103_31648176	0.0205701	AGUGGUU	NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1	AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1	AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1	AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1	AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1	AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1	AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1	U12170|ZEB1|6935|zinc finger E-box binding homeobox 1	AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1	AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1	BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1	BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1	BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1	BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1	AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1
hg18_v1_chr3_-_57174442_57174458	0.0203476	AGUGGUU	AF494208|IL17RD|54756|interleukin 17 receptor D	NM_017563|IL17RD|54756|interleukin 17 receptor D
hg18_v1_chr4_-_88669625_88669678	0.0197208	AGUGGUU	NM_001128310|SPARCL1|8404|SPARC-like 1 (hevin)	NM_004684|SPARCL1|8404|SPARC-like 1 (hevin)
hg18_v1_chr1_+_212228482_212228482	0.0187907	AGUGGUU	BC024201|PROX1|5629|prospero homeobox 1	NM_002763|PROX1|5629|prospero homeobox 1
hg18_v1_chr1_-_33110668_33110668	0.0186909	AGUGGUU	BC062297|FNDC5|252995|fibronectin type III domain containing 5	NM_001171941|FNDC5|252995|fibronectin type III domain containing 5
hg18_v1_chr7_-_32897934_32898018	0.0183077	AGUGGUU	NM_015483|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2
hg18_v1_chr12_-_109505409_109505498	0.0182858	AGUGGUU	BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)
hg18_v1_chr6_+_142510094_142510104	0.0181556	AGUGGUU	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr10_-_11693535_11693750	0.0175993	AGUGGUU	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr3_+_188043156_188043164	0.0172801	AGUGGUU	NM_001177800|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing	NM_004797|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing	AL832470|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing
hg18_v1_chr5_+_122138636_122138651	0.0170943	AGUGGUU	AK023716|SNX2|6643|sorting nexin 2	NM_003100|SNX2|6643|sorting nexin 2
hg18_v1_chr16_-_65343012_65343115	0.0159046	AGUGGUU	BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2
hg18_v1_chr5_+_155686333_155686344	0.0157227	AGUGGUU	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg18_v1_chr12_+_43896034_43896069	0.0155657	AGUGGUU	AK126409|ANO6|196527|anoctamin 6	NM_001025356|ANO6|196527|anoctamin 6	NM_001142679|ANO6|196527|anoctamin 6	AK310641|ANO6|196527|anoctamin 6
hg18_v1_chr15_-_20638283_20638283	0.0154432	AGUGGUU	BC025678|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1	NM_001142275|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1
hg18_v1_chr1_-_51757582_51757642	0.0148764	AGUGGUU	NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15	Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr5_+_175156125_175156215	0.0147437	AGUGGUU	NM_006650|CPLX2|10814|complexin 2	U35100|CPLX2|10814|complexin 2
hg18_v1_chr7_+_98940208_98940233	0.0145038	AGUGGUU	NM_145102|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5	AF170025|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5	BC030790|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5
hg18_v1_chr1_+_26220852_26220857	0.0139255	AGUGGUU	NM_004455|EXTL1|2134|exostoses (multiple)-like 1	U67191|EXTL1|2134|exostoses (multiple)-like 1
hg18_v1_chr5_-_38631263_38631263	0.0138289	AGUGGUU	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg18_v1_chr6_+_18263514_18263755	0.0129728	AGUGGUU	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chr1_+_15145001_15145001	0.0125311	AGUGGUU	AY505122|KAZN|23254|kazrin, periplakin interacting protein	NM_001017999|KAZN|23254|kazrin, periplakin interacting protein
hg18_v1_chr8_-_80842452_80842652	0.0125209	AGUGGUU	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR622924|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	CR598609|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1	NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1
hg18_v1_chr7_+_94374862_94374943	0.0124158	AGUGGUU	NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A
hg18_v1_chrX_+_133334965_133335121	0.0116793	AGUGGUU	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr1_-_210070736_210070771	0.0113224	AGUGGUU	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1
hg18_v1_chr1_-_43197421_43197433	0.0109321	AGUGGUU	NM_006516|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg18_v1_chr14_-_56805367_56805390	0.0108275	AGUGGUU	NM_006544|EXOC5|10640|exocyst complex component 5	AK312523|EXOC5|10640|exocyst complex component 5
hg18_v1_chr3_+_32123004_32123047	0.0108012	AGUGGUU	NM_015141|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like	D42047|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like
hg18_v1_chr5_-_124108672_124108703	0.0103994	AGUGGUU	BC131507|ZNF608|57507|zinc finger protein 608	AB033107|ZNF608|57507|zinc finger protein 608	BC151226|ZNF608|57507|zinc finger protein 608	NM_020747|ZNF608|57507|zinc finger protein 608
hg18_v1_chr11_+_111294810_111294846	0.0103409	AGUGGUU	NM_080659|C11orf52|91894|chromosome 11 open reading frame 52	BC008501|C11orf52|91894|chromosome 11 open reading frame 52
hg18_v1_chr6_-_47385605_47385703	0.00968343	AGUGGUU	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_-_239869826_239870370	0.00954629	AGUGGUU	BC051900|OPN3|23596|opsin 3	AF140242|OPN3|23596|opsin 3	BC073872|OPN3|23596|opsin 3	BC062622|OPN3|23596|opsin 3	AF303588|OPN3|23596|opsin 3	BC036773|OPN3|23596|opsin 3	CR600728|OPN3|23596|opsin 3	NM_014322|OPN3|23596|opsin 3
hg18_v1_chr5_+_154218389_154218404	0.00938621	AGUGGUU	AL122045|CNOT8|9337|CCR4-NOT transcription complex, subunit 8	NM_004779|CNOT8|9337|CCR4-NOT transcription complex, subunit 8	AF053318|CNOT8|9337|CCR4-NOT transcription complex, subunit 8	AK303775|CNOT8|9337|CCR4-NOT transcription complex, subunit 8
hg18_v1_chr15_+_62175229_62175251	0.00923229	AGUGGUU	NM_003099|SNX1|6642|sorting nexin 1	NM_148955|SNX1|6642|sorting nexin 1	NM_152826|SNX1|6642|sorting nexin 1	AB209013|SNX1|6642|sorting nexin 1	AK128179|SNX1|6642|sorting nexin 1	AK222561|SNX1|6642|sorting nexin 1	AK291752|SNX1|6642|sorting nexin 1
hg18_v1_chr9_-_23816062_23816062	0.00912313	AGUGGUU	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr1_-_51660328_51660380	0.00908033	AGUGGUU	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr9_-_99994704_99994804	0.00893429	AGUGGUU	AK292788|CORO2A|7464|coronin, actin binding protein, 2A	BC011690|CORO2A|7464|coronin, actin binding protein, 2A	AB209809|CORO2A|7464|coronin, actin binding protein, 2A	NM_052820|CORO2A|7464|coronin, actin binding protein, 2A
hg18_v1_chr1_+_93686154_93686466	0.00860883	AGUGGUU	NM_001024948|FNBP1L|54874|formin binding protein 1-like	NM_001164473|FNBP1L|54874|formin binding protein 1-like	NM_017737|FNBP1L|54874|formin binding protein 1-like	AY514449|FNBP1L|54874|formin binding protein 1-like
hg18_v1_chr11_+_12652427_12652652	0.00829218	AGUGGUU	NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg18_v1_chr5_+_138657317_138657399	0.00815825	AGUGGUU	CR597092|MATR3|9782|matrin 3	BX537365|MATR3|9782|matrin 3	AK316420|MATR3|9782|matrin 3	CR749210|MATR3|9782|matrin 3	NM_001194955|MATR3|9782|matrin 3	NM_001194956|MATR3|9782|matrin 3	AK299399|MATR3|9782|matrin 3
hg18_v1_chr11_+_64705725_64705822	0.00755649	AGUGGUU	NM_001198869|CAPN1|823|calpain 1, (mu/I) large subunit	BC075862|CAPN1|823|calpain 1, (mu/I) large subunit
hg18_v1_chr19_+_9806962_9807024	0.00705469	AGUGGUU	AK097558|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	AK291074|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	NM_006221|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	BC002899|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	CR608466|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	U49070|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	AF086512|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	BT019331|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	CR407654|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	DQ892978|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	DQ896226|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	CR625469|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1	CR599044|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1
hg18_v1_chr9_-_90983501_90983559	0.00697967	AGUGGUU	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chr21_+_39681558_39681617	0.00676586	AGUGGUU	AK310268|WRB|7485|tryptophan rich basic protein	NM_001146218|WRB|7485|tryptophan rich basic protein	BC111393|WRB|7485|tryptophan rich basic protein	AK299144|WRB|7485|tryptophan rich basic protein
hg18_v1_chr3_+_161600113_161600136	0.00602765	AGUGGUU	BC106033|SMC4|10051|structural maintenance of chromosomes 4	NM_001002800|SMC4|10051|structural maintenance of chromosomes 4	AK002200|SMC4|10051|structural maintenance of chromosomes 4	AK128143|SMC4|10051|structural maintenance of chromosomes 4	AK225437|SMC4|10051|structural maintenance of chromosomes 4	AK315070|SMC4|10051|structural maintenance of chromosomes 4	BC070161|SMC4|10051|structural maintenance of chromosomes 4	AB019987|SMC4|10051|structural maintenance of chromosomes 4	AK307508|SMC4|10051|structural maintenance of chromosomes 4
hg18_v1_chr22_+_19601619_19601720	0.00465119	AGUGGUU	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr6_-_33655995_33656047	0.00444998	AGUGGUU	CR615932|BAK1|578|BCL2-antagonist/killer 1	AK303422|BAK1|578|BCL2-antagonist/killer 1	AK293547|BAK1|578|BCL2-antagonist/killer 1	NM_001188|BAK1|578|BCL2-antagonist/killer 1
hg18_v1_chr9_-_122595475_122595560	0.00385524	AGUGGUU	BC000239|FBXW2|26190|F-box and WD repeat domain containing 2	BC018738|FBXW2|26190|F-box and WD repeat domain containing 2	AK300066|FBXW2|26190|F-box and WD repeat domain containing 2	AK314385|FBXW2|26190|F-box and WD repeat domain containing 2	AK022484|FBXW2|26190|F-box and WD repeat domain containing 2	NM_012164|FBXW2|26190|F-box and WD repeat domain containing 2
hg18_v1_chr12_-_29827952_29828123	0.00359543	AGUGGUU	GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1	NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1
hg18_v1_chr14_+_69148062_69148065	0.00299578	AGUGGUU	AK309302|KIAA0247|9766|KIAA0247	NM_014734|KIAA0247|9766|KIAA0247	BC064697|KIAA0247|9766|KIAA0247
hg18_v1_chr16_-_67723511_67723562	0.00245338	AGUGGUU	NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr19_+_49337548_49337555	0.00207332	AGUGGUU	AK314064|ZNF234|10780|zinc finger protein 234	NM_001144824|ZNF234|10780|zinc finger protein 234	NM_006630|ZNF234|10780|zinc finger protein 234
hg18_v1_chr16_+_387176_387249	0.00130201	AGUGGUU	BC017067|NME4|4833|non-metastatic cells 4, protein expressed in	NM_005009|NME4|4833|non-metastatic cells 4, protein expressed in	CR592051|NME4|4833|non-metastatic cells 4, protein expressed in	CR597313|NME4|4833|non-metastatic cells 4, protein expressed in	BC004880|NME4|4833|non-metastatic cells 4, protein expressed in	Y07604|NME4|4833|non-metastatic cells 4, protein expressed in	BT019438|NME4|4833|non-metastatic cells 4, protein expressed in
hg18_v1_chr5_-_180163495_180163541	0.00111889	AGUGGUU	NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr7_+_96473225_96473225	0.000991395	AGUGGUU	NM_005222|DLX6|1750|distal-less homeobox 6
