hg18_v1_chr4_-_99798563_99799002	3.75319	CCAGUGU	BC009704|TSPAN5|10098|tetraspanin 5	AF065389|TSPAN5|10098|tetraspanin 5	AK315723|TSPAN5|10098|tetraspanin 5	NM_005723|TSPAN5|10098|tetraspanin 5
hg18_v1_chr1_-_206484258_206484287	2.83497	CCAGUGU	NM_025179|PLXNA2|5362|plexin A2
hg18_v1_chr1_+_13784553_13784553	2.61965	CCAGUGU	NM_001006624|PDPN|10630|podoplanin	NM_001006625|PDPN|10630|podoplanin
hg18_v1_chr6_+_21701942_21702760	2.4026	CCAGUGU	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg18_v1_chr1_-_21544492_21544643	2.36695	CCAGUGU	X98272|ECE1|1889|endothelin converting enzyme 1	NM_001113348|ECE1|1889|endothelin converting enzyme 1
hg18_v1_chr6_-_119137923_119137930	2.32398	CCAGUGU	BC110835|C6orf204|387119|chromosome 6 open reading frame 204	BC064835|C6orf204|387119|chromosome 6 open reading frame 204	NM_001178035|C6orf204|387119|chromosome 6 open reading frame 204
hg18_v1_chr7_-_130891861_130891945	2.31206	CCAGUGU	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr20_-_4743768_4743768	2.27689	CCAGUGU	AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr15_-_50608296_50608801	2.26887	CCAGUGU	AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)
hg18_v1_chr1_+_183970093_183970305	2.22001	CCAGUGU	AF156100|HMCN1|83872|hemicentin 1	NM_031935|HMCN1|83872|hemicentin 1
hg18_v1_chr13_-_22905822_22905859	2.20816	CCAGUGU	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg18_v1_chr10_-_61819493_61819493	2.18295	CCAGUGU	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr17_+_45488330_45488350	2.06916	CCAGUGU	AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)	AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)	NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)	NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
hg18_v1_chr16_-_17472238_17472375	1.91529	CCAGUGU	AJ539163|XYLT1|64131|xylosyltransferase I	NM_022166|XYLT1|64131|xylosyltransferase I
hg18_v1_chr2_-_101134146_101134284	1.88381	CCAGUGU	AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)	AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)	NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)
hg18_v1_chr17_-_44037332_44037355	1.86197	CCAGUGU	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg18_v1_chr7_+_115953582_115953699	1.83796	CCAGUGU	NM_001172896|CAV1|857|caveolin 1, caveolae protein, 22kDa	AF172085|CAV1|857|caveolin 1, caveolae protein, 22kDa	NM_001172897|CAV1|857|caveolin 1, caveolae protein, 22kDa	AK307501|CAV1|857|caveolin 1, caveolae protein, 22kDa	EF649773|CAV1|857|caveolin 1, caveolae protein, 22kDa	EF649774|CAV1|857|caveolin 1, caveolae protein, 22kDa	AB209926|CAV1|857|caveolin 1, caveolae protein, 22kDa
hg18_v1_chr7_-_21951946_21952068	1.75369	CCAGUGU	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chr20_+_1194959_1194998	1.73643	CCAGUGU	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg18_v1_chr2_+_23461802_23461802	1.59769	CCAGUGU	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)
hg18_v1_chr1_+_19843261_19843487	1.54825	CCAGUGU	NM_005380|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	BC012037|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	D28124|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg18_v1_chr5_+_98132898_98132985	1.54161	CCAGUGU	BC067736|RGMB|285704|RGM domain family, member B	NM_001012761|RGMB|285704|RGM domain family, member B	AK074887|RGMB|285704|RGM domain family, member B
hg18_v1_chr10_+_18589589_18589703	1.52097	CCAGUGU	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr1_+_216585298_216585370	1.46706	CCAGUGU	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr12_+_12935222_12935222	1.42364	CCAGUGU	NM_003979|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A
hg18_v1_chr11_+_12355600_12355770	1.37784	CCAGUGU	AK098504|PARVA|55742|parvin, alpha	CR624090|PARVA|55742|parvin, alpha	AF237771|PARVA|55742|parvin, alpha	AK022316|PARVA|55742|parvin, alpha	BC016713|PARVA|55742|parvin, alpha	CR612774|PARVA|55742|parvin, alpha	CR590611|PARVA|55742|parvin, alpha	AK001655|PARVA|55742|parvin, alpha	NM_018222|PARVA|55742|parvin, alpha	CR612241|PARVA|55742|parvin, alpha	BC014535|PARVA|55742|parvin, alpha	CR599976|PARVA|55742|parvin, alpha	EU832601|PARVA|55742|parvin, alpha	AF325830|PARVA|55742|parvin, alpha
hg18_v1_chr15_-_53822468_53822569	1.36176	CCAGUGU	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr20_-_25514137_25514198	1.32851	CCAGUGU	AB023197|NINL|22981|ninein-like	EU718622|NINL|22981|ninein-like	NM_025176|NINL|22981|ninein-like	AK309298|NINL|22981|ninein-like
hg18_v1_chr16_-_30705707_30706089	1.27729	CCAGUGU	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg18_v1_chr9_+_115678365_115678476	1.27555	CCAGUGU	BC036039|ZNF618|114991|zinc finger protein 618	NM_133374|ZNF618|114991|zinc finger protein 618	BC136287|ZNF618|114991|zinc finger protein 618	BC143826|ZNF618|114991|zinc finger protein 618	AK126896|ZNF618|114991|zinc finger protein 618	BC053892|ZNF618|114991|zinc finger protein 618
hg18_v1_chr10_-_14856901_14856901	1.27303	CCAGUGU	AK127413|FAM107B|83641|family with sequence similarity 107, member B	NM_031453|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr10_+_129735796_129735893	1.27091	CCAGUGU	BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	U36623|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E
hg18_v1_chr14_-_35348086_35348207	1.24555	CCAGUGU	AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)
hg18_v1_chr6_+_44203335_44203434	1.24411	CCAGUGU	AK093629|TMEM63B|55362|transmembrane protein 63B	NM_018426|TMEM63B|55362|transmembrane protein 63B	AK309791|TMEM63B|55362|transmembrane protein 63B
hg18_v1_chr1_+_19842309_19842312	1.22288	CCAGUGU	AK300872|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_182744|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg18_v1_chr7_+_115952074_115952079	1.20275	CCAGUGU	NM_001753|CAV1|857|caveolin 1, caveolae protein, 22kDa	AK290871|CAV1|857|caveolin 1, caveolae protein, 22kDa
hg18_v1_chr8_+_98950453_98950557	1.18704	CCAGUGU	NM_002380|MATN2|4147|matrilin 2	NM_030583|MATN2|4147|matrilin 2	BC010444|MATN2|4147|matrilin 2	AY358895|MATN2|4147|matrilin 2	AK075489|MATN2|4147|matrilin 2	AL833931|MATN2|4147|matrilin 2	AL137638|MATN2|4147|matrilin 2
hg18_v1_chr2_-_206659140_206659172	1.18619	CCAGUGU	AK096585|INO80D|54891|INO80 complex subunit D	NM_017759|INO80D|54891|INO80 complex subunit D
hg18_v1_chr16_+_54072969_54072974	1.18437	CCAGUGU	AK310314|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	NM_001127891|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
hg18_v1_chr8_-_93184629_93184633	1.16512	CCAGUGU	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr12_+_27568311_27568494	1.15759	CCAGUGU	NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)
hg18_v1_chr1_+_181258952_181259302	1.14858	CCAGUGU	BC067813|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	NM_002293|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	J03202|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)
hg18_v1_chr22_-_20419975_20420122	1.11923	CCAGUGU	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg18_v1_chr20_-_10602429_10602710	1.10399	CCAGUGU	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr7_+_115952279_115952310	1.0896	CCAGUGU	BC009685|CAV1|857|caveolin 1, caveolae protein, 22kDa	BC006432|CAV1|857|caveolin 1, caveolae protein, 22kDa	NM_001172895|CAV1|857|caveolin 1, caveolae protein, 22kDa	AY762103|CAV1|857|caveolin 1, caveolae protein, 22kDa
hg18_v1_chr16_+_54070302_54070940	1.08754	CCAGUGU	NM_004530|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	X58968|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	AK312711|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	BC002576|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	CR608838|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	DQ891952|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	DQ895138|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	J03210|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
hg18_v1_chr3_+_63928459_63928536	1.08431	CCAGUGU	NM_001128149|ATXN7|6314|ataxin 7	AK310745|ATXN7|6314|ataxin 7	AK304062|ATXN7|6314|ataxin 7
hg18_v1_chr20_+_47862656_47862775	1.08159	CCAGUGU	NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8
hg18_v1_chr12_+_49080858_49081060	1.08095	CCAGUGU	NM_001170803|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_001170804|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_001170808|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_052879|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_199188|LARP4|113251|La ribonucleoprotein domain family, member 4	NM_199190|LARP4|113251|La ribonucleoprotein domain family, member 4	AL832198|LARP4|113251|La ribonucleoprotein domain family, member 4	CR936626|LARP4|113251|La ribonucleoprotein domain family, member 4	AL833272|LARP4|113251|La ribonucleoprotein domain family, member 4	BC022377|LARP4|113251|La ribonucleoprotein domain family, member 4	BC063479|LARP4|113251|La ribonucleoprotein domain family, member 4	AF370416|LARP4|113251|La ribonucleoprotein domain family, member 4	AK291746|LARP4|113251|La ribonucleoprotein domain family, member 4	AY004310|LARP4|113251|La ribonucleoprotein domain family, member 4	AK055521|LARP4|113251|La ribonucleoprotein domain family, member 4	BX647457|LARP4|113251|La ribonucleoprotein domain family, member 4	EU831655|LARP4|113251|La ribonucleoprotein domain family, member 4	EU831738|LARP4|113251|La ribonucleoprotein domain family, member 4	EU831909|LARP4|113251|La ribonucleoprotein domain family, member 4	EU832003|LARP4|113251|La ribonucleoprotein domain family, member 4
hg18_v1_chr11_-_65871592_65871742	1.08005	CCAGUGU	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR623114|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR591559|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	CR617432|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg18_v1_chr20_-_4752067_4752321	1.07706	CCAGUGU	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr3_-_126576693_126576887	1.07636	CCAGUGU	AF039019|ZNF148|7707|zinc finger protein 148	AL833616|ZNF148|7707|zinc finger protein 148	AF432210|ZNF148|7707|zinc finger protein 148	AJ236885|ZNF148|7707|zinc finger protein 148	L04282|ZNF148|7707|zinc finger protein 148	BC035591|ZNF148|7707|zinc finger protein 148	BC018971|ZNF148|7707|zinc finger protein 148	AK314203|ZNF148|7707|zinc finger protein 148	BC050260|ZNF148|7707|zinc finger protein 148	NM_021964|ZNF148|7707|zinc finger protein 148
hg18_v1_chr11_-_46896484_46896792	1.06234	CCAGUGU	AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4	BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4	BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4	AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4	NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4
hg18_v1_chr16_+_14072380_14072794	1.06	CCAGUGU	AK126948|MKL2|57496|MKL/myocardin-like 2	AK294765|MKL2|57496|MKL/myocardin-like 2	AY374297|MKL2|57496|MKL/myocardin-like 2	NM_014048|MKL2|57496|MKL/myocardin-like 2
hg18_v1_chr7_+_143683365_143683507	1.02563	CCAGUGU	AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5	BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5
hg18_v1_chr7_+_94374862_94374943	1.00298	CCAGUGU	NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A
hg18_v1_chr6_-_38671741_38671820	0.991207	CCAGUGU	BC101354|BTBD9|114781|BTB (POZ) domain containing 9	BC101355|BTBD9|114781|BTB (POZ) domain containing 9	BC101356|BTBD9|114781|BTB (POZ) domain containing 9	BC101357|BTBD9|114781|BTB (POZ) domain containing 9	AK057507|BTBD9|114781|BTB (POZ) domain containing 9	NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9	NM_152733|BTBD9|114781|BTB (POZ) domain containing 9
hg18_v1_chr2_+_241586927_241586927	0.982293	CCAGUGU	NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1
hg18_v1_chr2_+_100802923_100803473	0.976879	CCAGUGU	NM_002518|NPAS2|4862|neuronal PAS domain protein 2	U77970|NPAS2|4862|neuronal PAS domain protein 2	BC072383|NPAS2|4862|neuronal PAS domain protein 2	BC051351|NPAS2|4862|neuronal PAS domain protein 2
hg18_v1_chr1_+_32777358_32777358	0.976382	CCAGUGU	NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr2_-_153282104_153282229	0.97565	CCAGUGU	U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg18_v1_chr10_+_18669619_18669619	0.951583	CCAGUGU	AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr6_+_96570565_96570612	0.950276	CCAGUGU	NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg18_v1_chr8_-_93181091_93181091	0.916942	CCAGUGU	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr19_-_57223329_57223636	0.913427	CCAGUGU	BC101392|ZNF614|80110|zinc finger protein 614	BC101393|ZNF614|80110|zinc finger protein 614	BC101394|ZNF614|80110|zinc finger protein 614	BC101395|ZNF614|80110|zinc finger protein 614	AK309346|ZNF614|80110|zinc finger protein 614	BC004930|ZNF614|80110|zinc finger protein 614	AK097156|ZNF614|80110|zinc finger protein 614	NM_025040|ZNF614|80110|zinc finger protein 614
hg18_v1_chr4_-_23500706_23500797	0.907213	CCAGUGU	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg18_v1_chr20_+_34206070_34206089	0.893407	CCAGUGU	NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1	AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1
hg18_v1_chr13_+_94052022_94052185	0.877307	CCAGUGU	NM_180989|GPR180|160897|G protein-coupled receptor 180	BC033906|GPR180|160897|G protein-coupled receptor 180	BC052243|GPR180|160897|G protein-coupled receptor 180	AK126794|GPR180|160897|G protein-coupled receptor 180
hg18_v1_chr6_+_30959839_30959839	0.876346	CCAGUGU	BC008716|DDR1|780|discoidin domain receptor tyrosine kinase 1	BC013400|DDR1|780|discoidin domain receptor tyrosine kinase 1	NM_001954|DDR1|780|discoidin domain receptor tyrosine kinase 1
hg18_v1_chr1_+_13782838_13783115	0.866829	CCAGUGU	NM_006474|PDPN|10630|podoplanin	NM_198389|PDPN|10630|podoplanin	BC014668|PDPN|10630|podoplanin	BC022812|PDPN|10630|podoplanin	AY194238|PDPN|10630|podoplanin	AK075327|PDPN|10630|podoplanin	AK075345|PDPN|10630|podoplanin	AK312607|PDPN|10630|podoplanin	CR602323|PDPN|10630|podoplanin	CR615370|PDPN|10630|podoplanin	CR605194|PDPN|10630|podoplanin	AF390106|PDPN|10630|podoplanin	AF030428|PDPN|10630|podoplanin	AJ225022|PDPN|10630|podoplanin	AB127958|PDPN|10630|podoplanin
hg18_v1_chr12_+_50633430_50633430	0.849746	CCAGUGU	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg18_v1_chr6_+_10663934_10663934	0.845384	CCAGUGU	NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg18_v1_chr14_-_38971370_38971454	0.845212	CCAGUGU	BC053537|FBXO33|254170|F-box protein 33	BC068566|FBXO33|254170|F-box protein 33	BC030611|FBXO33|254170|F-box protein 33	NM_203301|FBXO33|254170|F-box protein 33
hg18_v1_chr17_-_24193866_24193966	0.826416	CCAGUGU	BC021228|C17orf63|55731|chromosome 17 open reading frame 63	BX647766|C17orf63|55731|chromosome 17 open reading frame 63	AK299477|C17orf63|55731|chromosome 17 open reading frame 63	AK001562|C17orf63|55731|chromosome 17 open reading frame 63	AK057665|C17orf63|55731|chromosome 17 open reading frame 63	NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63	NM_018182|C17orf63|55731|chromosome 17 open reading frame 63
hg18_v1_chr5_-_137099602_137099718	0.820731	CCAGUGU	BC034035|KLHL3|26249|kelch-like 3 (Drosophila)	NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)
hg18_v1_chr22_-_16887151_16887372	0.806516	CCAGUGU	AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3	NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3	NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3	NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3
hg18_v1_chr12_-_68369322_68369323	0.80646	CCAGUGU	NM_152439|BEST3|144453|bestrophin 3	BC028087|BEST3|144453|bestrophin 3
hg18_v1_chr11_-_119104463_119104722	0.805526	CCAGUGU	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)	NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg18_v1_chr8_+_104380234_104380316	0.796511	CCAGUGU	NM_001164616|FZD6|8323|frizzled homolog 6 (Drosophila)	NM_003506|FZD6|8323|frizzled homolog 6 (Drosophila)	AK299341|FZD6|8323|frizzled homolog 6 (Drosophila)	AK296824|FZD6|8323|frizzled homolog 6 (Drosophila)	BC060836|FZD6|8323|frizzled homolog 6 (Drosophila)	BC036106|FZD6|8323|frizzled homolog 6 (Drosophila)	AB012911|FZD6|8323|frizzled homolog 6 (Drosophila)	AK304092|FZD6|8323|frizzled homolog 6 (Drosophila)	AK316544|FZD6|8323|frizzled homolog 6 (Drosophila)	CR623773|FZD6|8323|frizzled homolog 6 (Drosophila)
hg18_v1_chr16_+_15950707_15951024	0.78197	CCAGUGU	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg18_v1_chr8_+_104379836_104379865	0.769347	CCAGUGU	NM_001164615|FZD6|8323|frizzled homolog 6 (Drosophila)	BX640609|FZD6|8323|frizzled homolog 6 (Drosophila)	AK313789|FZD6|8323|frizzled homolog 6 (Drosophila)
hg18_v1_chr17_-_44794325_44794833	0.759618	CCAGUGU	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr16_+_11669736_11669862	0.758871	CCAGUGU	NM_003498|SNN|8303|stannin	BC036100|SNN|8303|stannin	BC036443|SNN|8303|stannin	AL161976|SNN|8303|stannin	AF030196|SNN|8303|stannin
hg18_v1_chr1_-_212791597_212791646	0.753913	CCAGUGU	NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14
hg18_v1_chr2_-_19421852_19421868	0.743471	CCAGUGU	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)	NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)	AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)
hg18_v1_chr15_-_46257745_46257874	0.739819	CCAGUGU	AB037762|MYEF2|50804|myelin expression factor 2	BC152420|MYEF2|50804|myelin expression factor 2	BC152451|MYEF2|50804|myelin expression factor 2	BC068523|MYEF2|50804|myelin expression factor 2	AK023133|MYEF2|50804|myelin expression factor 2	NM_016132|MYEF2|50804|myelin expression factor 2
hg18_v1_chr7_-_139123906_139124843	0.738854	CCAGUGU	AF208291|HIPK2|28996|homeodomain interacting protein kinase 2	AF326592|HIPK2|28996|homeodomain interacting protein kinase 2	NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2	NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2
hg18_v1_chr12_+_55768941_55768951	0.72711	CCAGUGU	NM_005967|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)
hg18_v1_chr15_+_78774664_78774771	0.726434	CCAGUGU	BC115003|FAM108C1|58489|family with sequence similarity 108, member C1	NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1	BC059401|FAM108C1|58489|family with sequence similarity 108, member C1
hg18_v1_chr8_-_81949570_81949570	0.713477	CCAGUGU	AK131274|ZNF704|619279|zinc finger protein 704	NM_001033723|ZNF704|619279|zinc finger protein 704
hg18_v1_chr11_+_86426518_86426734	0.708685	CCAGUGU	NM_001168724|TMEM135|65084|transmembrane protein 135	NM_022918|TMEM135|65084|transmembrane protein 135	AK296774|TMEM135|65084|transmembrane protein 135	BX648678|TMEM135|65084|transmembrane protein 135	AK291804|TMEM135|65084|transmembrane protein 135	AK000684|TMEM135|65084|transmembrane protein 135	BC030952|TMEM135|65084|transmembrane protein 135	BC051462|TMEM135|65084|transmembrane protein 135	AK302473|TMEM135|65084|transmembrane protein 135
hg18_v1_chr1_-_152162074_152162076	0.708616	CCAGUGU	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B	NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B
hg18_v1_chr16_-_23068010_23068091	0.706061	CCAGUGU	AK126752|USP31|57478|ubiquitin specific peptidase 31	AJ586135|USP31|57478|ubiquitin specific peptidase 31	NM_020718|USP31|57478|ubiquitin specific peptidase 31
hg18_v1_chr20_+_34163671_34163761	0.689814	CCAGUGU	CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1	NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1
hg18_v1_chr2_-_219141199_219141395	0.680984	CCAGUGU	BC133007|USP37|57695|ubiquitin specific peptidase 37	BC133009|USP37|57695|ubiquitin specific peptidase 37	BC144249|USP37|57695|ubiquitin specific peptidase 37	BC144252|USP37|57695|ubiquitin specific peptidase 37	AK095577|USP37|57695|ubiquitin specific peptidase 37	AK128583|USP37|57695|ubiquitin specific peptidase 37	BX538024|USP37|57695|ubiquitin specific peptidase 37	BC050461|USP37|57695|ubiquitin specific peptidase 37	BC112901|USP37|57695|ubiquitin specific peptidase 37	AL832645|USP37|57695|ubiquitin specific peptidase 37	NM_020935|USP37|57695|ubiquitin specific peptidase 37
hg18_v1_chr3_-_9266251_9266385	0.662579	CCAGUGU	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3
hg18_v1_chr17_+_40580466_40580466	0.659644	CCAGUGU	NM_006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1
hg18_v1_chr1_-_115014151_115014256	0.649349	CCAGUGU	CR749576|DENND2C|163259|DENN/MADD domain containing 2C	BX647950|DENND2C|163259|DENN/MADD domain containing 2C	NM_198459|DENND2C|163259|DENN/MADD domain containing 2C
hg18_v1_chr17_-_40122542_40122766	0.64894	CCAGUGU	BC023298|CCDC43|124808|coiled-coil domain containing 43	AL833590|CCDC43|124808|coiled-coil domain containing 43	AK056357|CCDC43|124808|coiled-coil domain containing 43	BC047776|CCDC43|124808|coiled-coil domain containing 43	BX648868|CCDC43|124808|coiled-coil domain containing 43	NM_001099225|CCDC43|124808|coiled-coil domain containing 43	NM_144609|CCDC43|124808|coiled-coil domain containing 43
hg18_v1_chr8_+_30361485_30361618	0.645891	CCAGUGU	NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing	NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing	NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing	NM_006867|RBPMS|11030|RNA binding protein with multiple splicing	CR604775|RBPMS|11030|RNA binding protein with multiple splicing	CR613046|RBPMS|11030|RNA binding protein with multiple splicing	AK304858|RBPMS|11030|RNA binding protein with multiple splicing	D84107|RBPMS|11030|RNA binding protein with multiple splicing	D84108|RBPMS|11030|RNA binding protein with multiple splicing	D84109|RBPMS|11030|RNA binding protein with multiple splicing	D84110|RBPMS|11030|RNA binding protein with multiple splicing	BC003608|RBPMS|11030|RNA binding protein with multiple splicing
hg18_v1_chr14_+_66777578_66778255	0.645215	CCAGUGU	BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg18_v1_chr2_+_43854681_43854742	0.624493	CCAGUGU	AK223432|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	NM_001193464|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	NM_015522|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	NM_016008|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	AK074206|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	AK301489|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	BC016324|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	BC040558|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	CR600166|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	BC058823|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	AF151818|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	AY083346|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	BC006969|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1	CR622142|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1
hg18_v1_chr20_-_14266200_14266312	0.614743	CCAGUGU	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg18_v1_chr15_+_88345612_88345774	0.608963	CCAGUGU	BC020301|ZNF710|374655|zinc finger protein 710	AK094712|ZNF710|374655|zinc finger protein 710	NM_198526|ZNF710|374655|zinc finger protein 710
hg18_v1_chr8_+_70567581_70567605	0.600498	CCAGUGU	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr5_-_83052606_83052775	0.588718	CCAGUGU	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr12_-_68379331_68379462	0.586748	CCAGUGU	BC151138|BEST3|144453|bestrophin 3	CR612373|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	CR614874|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg18_v1_chr17_+_4683280_4683546	0.585669	CCAGUGU	NM_001024937|MINK1|50488|misshapen-like kinase 1	NM_015716|MINK1|50488|misshapen-like kinase 1	NM_153827|MINK1|50488|misshapen-like kinase 1	NM_170663|MINK1|50488|misshapen-like kinase 1	BC034673|MINK1|50488|misshapen-like kinase 1	AB209450|MINK1|50488|misshapen-like kinase 1	AB041926|MINK1|50488|misshapen-like kinase 1	BC094686|MINK1|50488|misshapen-like kinase 1	DQ891158|MINK1|50488|misshapen-like kinase 1	DQ894339|MINK1|50488|misshapen-like kinase 1	AB035698|MINK1|50488|misshapen-like kinase 1	AY775058|MINK1|50488|misshapen-like kinase 1
hg18_v1_chr2_-_37047113_37047166	0.570154	CCAGUGU	BC106879|STRN|6801|striatin, calmodulin binding protein	AJ223814|STRN|6801|striatin, calmodulin binding protein	BC106878|STRN|6801|striatin, calmodulin binding protein	NM_003162|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr17_+_25828546_25828573	0.549512	CCAGUGU	AK000606|GOSR1|9527|golgi SNAP receptor complex member 1	AK291381|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1	NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1	AK298714|GOSR1|9527|golgi SNAP receptor complex member 1	AF047438|GOSR1|9527|golgi SNAP receptor complex member 1	BC012620|GOSR1|9527|golgi SNAP receptor complex member 1	AF073926|GOSR1|9527|golgi SNAP receptor complex member 1	BC040471|GOSR1|9527|golgi SNAP receptor complex member 1
hg18_v1_chr14_-_34169047_34169166	0.54713	CCAGUGU	BC001798|SNX6|58533|sorting nexin 6	NM_021249|SNX6|58533|sorting nexin 6	U83194|SNX6|58533|sorting nexin 6	AF121856|SNX6|58533|sorting nexin 6	CR593172|SNX6|58533|sorting nexin 6	CR625969|SNX6|58533|sorting nexin 6	AK292250|SNX6|58533|sorting nexin 6	AK308464|SNX6|58533|sorting nexin 6	AK296213|SNX6|58533|sorting nexin 6	NM_152233|SNX6|58533|sorting nexin 6
hg18_v1_chr19_-_60783996_60784057	0.545978	CCAGUGU	AK092772|ZNF579|163033|zinc finger protein 579	NM_152600|ZNF579|163033|zinc finger protein 579
hg18_v1_chr7_+_100557098_100557171	0.539723	CCAGUGU	NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	CR614829|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1	M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
hg18_v1_chr6_-_119079712_119079746	0.539317	CCAGUGU	BC048977|C6orf204|387119|chromosome 6 open reading frame 204	BC052778|C6orf204|387119|chromosome 6 open reading frame 204	NM_001042475|C6orf204|387119|chromosome 6 open reading frame 204	NM_206921|C6orf204|387119|chromosome 6 open reading frame 204	BC036553|C6orf204|387119|chromosome 6 open reading frame 204
hg18_v1_chr7_+_838663_838686	0.532413	CCAGUGU	BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1	NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1
hg18_v1_chr17_-_59403932_59404009	0.527065	CCAGUGU	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit
hg18_v1_chr7_+_822777_822839	0.522994	CCAGUGU	NM_001171944|SUN1|23353|Sad1 and UNC84 domain containing 1	NM_001171945|SUN1|23353|Sad1 and UNC84 domain containing 1	NM_025154|SUN1|23353|Sad1 and UNC84 domain containing 1	AK022816|SUN1|23353|Sad1 and UNC84 domain containing 1	AK302896|SUN1|23353|Sad1 and UNC84 domain containing 1	AK309120|SUN1|23353|Sad1 and UNC84 domain containing 1	AK022469|SUN1|23353|Sad1 and UNC84 domain containing 1	BX538211|SUN1|23353|Sad1 and UNC84 domain containing 1	BC151827|SUN1|23353|Sad1 and UNC84 domain containing 1	AB018353|SUN1|23353|Sad1 and UNC84 domain containing 1	BC152418|SUN1|23353|Sad1 and UNC84 domain containing 1
hg18_v1_chrX_+_49531209_49531209	0.520989	CCAGUGU	NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked
hg18_v1_chr20_+_32414715_32414792	0.520051	CCAGUGU	NM_031483|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)	AK297809|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)	AK304090|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)	AK315212|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)	BC011571|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)	AB056663|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)
hg18_v1_chr6_+_17390910_17391056	0.515203	CCAGUGU	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr5_-_56283672_56283730	0.512184	CCAGUGU	BX537798|MIER3|166968|mesoderm induction early response 1, family member 3	BX640907|MIER3|166968|mesoderm induction early response 1, family member 3	CR749246|MIER3|166968|mesoderm induction early response 1, family member 3	CR749805|MIER3|166968|mesoderm induction early response 1, family member 3	BX647359|MIER3|166968|mesoderm induction early response 1, family member 3	BX648294|MIER3|166968|mesoderm induction early response 1, family member 3	BC041348|MIER3|166968|mesoderm induction early response 1, family member 3	NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3
hg18_v1_chr11_-_127897271_127897417	0.50688	CCAGUGU	BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)
hg18_v1_chr20_+_33823318_33823401	0.496781	CCAGUGU	BC093405|PHF20|51230|PHD finger protein 20	NM_016436|PHF20|51230|PHD finger protein 20	BC062681|PHF20|51230|PHD finger protein 20	AF258787|PHF20|51230|PHD finger protein 20	AY134747|PHF20|51230|PHD finger protein 20	CR626433|PHF20|51230|PHD finger protein 20	AK054597|PHF20|51230|PHD finger protein 20	BC150178|PHF20|51230|PHD finger protein 20	AF220416|PHF20|51230|PHD finger protein 20	AK314503|PHF20|51230|PHD finger protein 20	BC080598|PHF20|51230|PHD finger protein 20	BC016948|PHF20|51230|PHD finger protein 20	BC048210|PHF20|51230|PHD finger protein 20	BC006415|PHF20|51230|PHD finger protein 20
hg18_v1_chr20_+_48032918_48033003	0.495754	CCAGUGU	NM_005985|SNAI1|6615|snail homolog 1 (Drosophila)	AK313228|SNAI1|6615|snail homolog 1 (Drosophila)	CR591963|SNAI1|6615|snail homolog 1 (Drosophila)	CR600523|SNAI1|6615|snail homolog 1 (Drosophila)	CR603151|SNAI1|6615|snail homolog 1 (Drosophila)	CR607902|SNAI1|6615|snail homolog 1 (Drosophila)	CR614923|SNAI1|6615|snail homolog 1 (Drosophila)	CR621605|SNAI1|6615|snail homolog 1 (Drosophila)	CR596163|SNAI1|6615|snail homolog 1 (Drosophila)	BC012910|SNAI1|6615|snail homolog 1 (Drosophila)	CR622459|SNAI1|6615|snail homolog 1 (Drosophila)	AF125377|SNAI1|6615|snail homolog 1 (Drosophila)	CR594531|SNAI1|6615|snail homolog 1 (Drosophila)	CR608397|SNAI1|6615|snail homolog 1 (Drosophila)	CR598990|SNAI1|6615|snail homolog 1 (Drosophila)	DQ891599|SNAI1|6615|snail homolog 1 (Drosophila)	DQ894793|SNAI1|6615|snail homolog 1 (Drosophila)	AF131208|SNAI1|6615|snail homolog 1 (Drosophila)
hg18_v1_chrX_+_117364055_117364332	0.492016	CCAGUGU	NM_001184965|WDR44|54521|WD repeat domain 44	NM_001184966|WDR44|54521|WD repeat domain 44	NM_019045|WDR44|54521|WD repeat domain 44	AK127556|WDR44|54521|WD repeat domain 44	BX537578|WDR44|54521|WD repeat domain 44	AL833605|WDR44|54521|WD repeat domain 44	BX538087|WDR44|54521|WD repeat domain 44	AK299711|WDR44|54521|WD repeat domain 44	BC028697|WDR44|54521|WD repeat domain 44	BX648150|WDR44|54521|WD repeat domain 44
hg18_v1_chr3_+_88270951_88270951	0.487235	CCAGUGU	AF543494|ZNF654|55279|zinc finger protein 654	NM_018293|ZNF654|55279|zinc finger protein 654
hg18_v1_chr13_+_24773665_24773910	0.485125	CCAGUGU	NM_001008564|NUPL1|9818|nucleoporin like 1	NM_014089|NUPL1|9818|nucleoporin like 1	AK123955|NUPL1|9818|nucleoporin like 1	AK303409|NUPL1|9818|nucleoporin like 1	AB007870|NUPL1|9818|nucleoporin like 1	AK302946|NUPL1|9818|nucleoporin like 1	CR605945|NUPL1|9818|nucleoporin like 1	BC001104|NUPL1|9818|nucleoporin like 1
hg18_v1_chr5_+_154300821_154300863	0.484556	CCAGUGU	NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22	NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22	AK000601|MRPL22|29093|mitochondrial ribosomal protein L22	AK302784|MRPL22|29093|mitochondrial ribosomal protein L22	CR933679|MRPL22|29093|mitochondrial ribosomal protein L22	BC012565|MRPL22|29093|mitochondrial ribosomal protein L22	AF161507|MRPL22|29093|mitochondrial ribosomal protein L22
hg18_v1_chr17_+_24742068_24742074	0.483971	CCAGUGU	NM_020791|TAOK1|57551|TAO kinase 1	BC133039|TAOK1|57551|TAO kinase 1	BC144067|TAOK1|57551|TAO kinase 1
hg18_v1_chr2_+_70338708_70338801	0.478056	CCAGUGU	NM_016297|PCYOX1|51449|prenylcysteine oxidase 1	AF181490|PCYOX1|51449|prenylcysteine oxidase 1	BC051891|PCYOX1|51449|prenylcysteine oxidase 1	AY359063|PCYOX1|51449|prenylcysteine oxidase 1	BC033815|PCYOX1|51449|prenylcysteine oxidase 1	AK314453|PCYOX1|51449|prenylcysteine oxidase 1	AK225302|PCYOX1|51449|prenylcysteine oxidase 1	AK303043|PCYOX1|51449|prenylcysteine oxidase 1	BC022259|PCYOX1|51449|prenylcysteine oxidase 1	CR623756|PCYOX1|51449|prenylcysteine oxidase 1	CR596400|PCYOX1|51449|prenylcysteine oxidase 1	AB020715|PCYOX1|51449|prenylcysteine oxidase 1	DQ890801|PCYOX1|51449|prenylcysteine oxidase 1	DQ893956|PCYOX1|51449|prenylcysteine oxidase 1
hg18_v1_chr17_-_55958274_55958365	0.476142	CCAGUGU	AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg18_v1_chr1_-_21489475_21489568	0.473497	CCAGUGU	Z35307|ECE1|1889|endothelin converting enzyme 1	D49471|ECE1|1889|endothelin converting enzyme 1	AK290656|ECE1|1889|endothelin converting enzyme 1	AK309677|ECE1|1889|endothelin converting enzyme 1	AK296486|ECE1|1889|endothelin converting enzyme 1	BC117256|ECE1|1889|endothelin converting enzyme 1	BC126257|ECE1|1889|endothelin converting enzyme 1	NM_001397|ECE1|1889|endothelin converting enzyme 1
hg18_v1_chr12_+_92295738_92296308	0.473387	CCAGUGU	NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1	AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1	BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1	AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4	AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg18_v1_chrX_-_99778340_99778503	0.465026	CCAGUGU	CR604634|TSPAN6|7105|tetraspanin 6	CR597714|TSPAN6|7105|tetraspanin 6	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	CR598712|TSPAN6|7105|tetraspanin 6	CR598720|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg18_v1_chr7_+_130445394_130445394	0.464981	CCAGUGU	AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs
hg18_v1_chr9_-_36390212_36390295	0.46312	CCAGUGU	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg18_v1_chr10_+_18729518_18729621	0.460609	CCAGUGU	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr5_+_72957736_72957746	0.458887	CCAGUGU	AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor	NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor	NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor
hg18_v1_chr11_-_57054756_57054807	0.458884	CCAGUGU	AK289751|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	BC032133|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	AF150089|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	NM_012456|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)
hg18_v1_chr10_-_25052549_25052675	0.458143	CCAGUGU	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21	NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21
hg18_v1_chr6_+_17389752_17389914	0.451469	CCAGUGU	AK095016|RBM24|221662|RNA binding motif protein 24	AK293052|RBM24|221662|RNA binding motif protein 24	AK315856|RBM24|221662|RNA binding motif protein 24	NM_001143942|RBM24|221662|RNA binding motif protein 24	AY547318|RBM24|221662|RNA binding motif protein 24	AK129865|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr9_-_110922030_110922052	0.44236	CCAGUGU	AF153415|C9orf5|23731|chromosome 9 open reading frame 5	NM_032012|C9orf5|23731|chromosome 9 open reading frame 5
hg18_v1_chr12_+_124377114_124377114	0.441548	CCAGUGU	NM_052907|TMEM132B|114795|transmembrane protein 132B
hg18_v1_chr22_+_29361672_29361801	0.438982	CCAGUGU	CR614052|SLC35E4|339665|solute carrier family 35, member E4	NM_001001479|SLC35E4|339665|solute carrier family 35, member E4	BC040191|SLC35E4|339665|solute carrier family 35, member E4
hg18_v1_chr1_+_242281175_242281183	0.436392	CCAGUGU	NM_205768|ZNF238|10472|zinc finger protein 238
hg18_v1_chr8_-_93099040_93099083	0.432703	CCAGUGU	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr3_+_188130967_188131040	0.432252	CCAGUGU	NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg18_v1_chr17_-_15106597_15106630	0.430563	CCAGUGU	CR618437|PMP22|5376|peripheral myelin protein 22	NM_153321|PMP22|5376|peripheral myelin protein 22	CR621373|PMP22|5376|peripheral myelin protein 22
hg18_v1_chr1_+_28867801_28867831	0.429598	CCAGUGU	AK000892|GMEB1|10691|glucocorticoid modulatory element binding protein 1	NM_006582|GMEB1|10691|glucocorticoid modulatory element binding protein 1	NM_024482|GMEB1|10691|glucocorticoid modulatory element binding protein 1
hg18_v1_chr19_+_62566690_62566767	0.428849	CCAGUGU	AF058918|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1	AF291676|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1	AK055662|ZNF547|284306|zinc finger protein 547	NM_173631|ZNF547|284306|zinc finger protein 547	BC008889|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1	BC032809|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1	BC042681|ZNF547|284306|zinc finger protein 547	AL832545|ZNF547|284306|zinc finger protein 547	AK291464|ZNF547|284306|zinc finger protein 547
hg18_v1_chr11_-_101828563_101829084	0.420071	CCAGUGU	DQ891654|TMEM123|114908|transmembrane protein 123	DQ894842|TMEM123|114908|transmembrane protein 123	AY358696|TMEM123|114908|transmembrane protein 123	BC032296|TMEM123|114908|transmembrane protein 123	AY157580|TMEM123|114908|transmembrane protein 123	AK075420|TMEM123|114908|transmembrane protein 123	AY008283|TMEM123|114908|transmembrane protein 123	AK225790|TMEM123|114908|transmembrane protein 123	NM_052932|TMEM123|114908|transmembrane protein 123
hg18_v1_chr22_+_40286957_40287082	0.419309	CCAGUGU	NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding	CR606962|CSDC2|27254|cold shock domain containing C2, RNA binding	AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding	BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding	CR615903|CSDC2|27254|cold shock domain containing C2, RNA binding	AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding	CR625281|CSDC2|27254|cold shock domain containing C2, RNA binding
hg18_v1_chr6_+_30964441_30964485	0.418084	CCAGUGU	X74979|DDR1|780|discoidin domain receptor tyrosine kinase 1	NM_013994|DDR1|780|discoidin domain receptor tyrosine kinase 1	EU826613|DDR1|780|discoidin domain receptor tyrosine kinase 1	EU826614|DDR1|780|discoidin domain receptor tyrosine kinase 1
hg18_v1_chr6_+_73133152_73133205	0.408149	CCAGUGU	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr12_+_74160779_74160927	0.407665	CCAGUGU	NM_006851|GLIPR1|11010|GLI pathogenesis-related 1	AK304847|GLIPR1|11010|GLI pathogenesis-related 1	X91911|GLIPR1|11010|GLI pathogenesis-related 1	BC005227|GLIPR1|11010|GLI pathogenesis-related 1	U16307|GLIPR1|11010|GLI pathogenesis-related 1	BC012510|GLIPR1|11010|GLI pathogenesis-related 1	AF400440|GLIPR1|11010|GLI pathogenesis-related 1	AK313449|GLIPR1|11010|GLI pathogenesis-related 1	EF667354|GLIPR1|11010|GLI pathogenesis-related 1
hg18_v1_chr9_+_88953378_88953389	0.402904	CCAGUGU	AK127445|C9orf170|401535|chromosome 9 open reading frame 170	NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170	BC132741|C9orf170|401535|chromosome 9 open reading frame 170	BC136791|C9orf170|401535|chromosome 9 open reading frame 170
hg18_v1_chr17_+_52517529_52517698	0.401629	CCAGUGU	NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1	BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1	X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1
hg18_v1_chr1_-_144538285_144538461	0.401618	CCAGUGU	BT006679|GPR89A|653519|G protein-coupled receptor 89A	DQ890650|GPR89B|51463|G protein-coupled receptor 89B	DQ893830|GPR89A|653519|G protein-coupled receptor 89A	BC003187|GPR89A|653519|G protein-coupled receptor 89A	AK316371|GPR89A|653519|G protein-coupled receptor 89A	BC146880|GPR89A|653519|G protein-coupled receptor 89A	AF132947|GPR89A|653519|G protein-coupled receptor 89A	U78723|GPR89B|51463|G protein-coupled receptor 89B	BC067816|GPR89A|653519|G protein-coupled receptor 89A	AB097024|GPR89A|653519|G protein-coupled receptor 89A	AB097025|GPR89A|653519|G protein-coupled receptor 89A	AK223223|GPR89A|653519|G protein-coupled receptor 89A	AK299995|GPR89A|653519|G protein-coupled receptor 89A	AK302266|GPR89B|51463|G protein-coupled receptor 89B	AY358966|GPR89A|653519|G protein-coupled receptor 89A	AK021758|GPR89A|653519|G protein-coupled receptor 89A	AK297145|GPR89A|653519|G protein-coupled receptor 89A	NM_001097612|GPR89A|653519|G protein-coupled receptor 89A	NM_001097613|GPR89A|653519|G protein-coupled receptor 89A
hg18_v1_chr12_+_108020305_108020514	0.398458	CCAGUGU	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	CR613619|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg18_v1_chr5_-_179166378_179166561	0.396665	CCAGUGU	BC051835|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B	NM_014275|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
hg18_v1_chr7_-_50767512_50767543	0.390493	CCAGUGU	AF000017|GRB10|2887|growth factor receptor-bound protein 10	AB000731|GRB10|2887|growth factor receptor-bound protein 10	AF001534|GRB10|2887|growth factor receptor-bound protein 10	NM_001001549|GRB10|2887|growth factor receptor-bound protein 10	NM_005311|GRB10|2887|growth factor receptor-bound protein 10	U34355|GRB10|2887|growth factor receptor-bound protein 10
hg18_v1_chr6_+_30960305_30960424	0.3858	CCAGUGU	NM_013993|DDR1|780|discoidin domain receptor tyrosine kinase 1	L20817|DDR1|780|discoidin domain receptor tyrosine kinase 1	L57508|DDR1|780|discoidin domain receptor tyrosine kinase 1	BC070070|DDR1|780|discoidin domain receptor tyrosine kinase 1	AB210021|DDR1|780|discoidin domain receptor tyrosine kinase 1	L11315|DDR1|780|discoidin domain receptor tyrosine kinase 1
hg18_v1_chr1_+_178190493_178190563	0.382822	CCAGUGU	AK095601|CEP350|9857|centrosomal protein 350kDa	NM_014810|CEP350|9857|centrosomal protein 350kDa
hg18_v1_chr5_-_89861048_89861197	0.382425	CCAGUGU	BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3	NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3
hg18_v1_chr2_+_148319033_148319191	0.381015	CCAGUGU	D31770|ACVR2A|92|activin A receptor, type IIA	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr20_+_43028533_43028587	0.380826	CCAGUGU	NM_006282|STK4|6789|serine/threonine kinase 4	AB209315|STK4|6789|serine/threonine kinase 4	BC029511|STK4|6789|serine/threonine kinase 4	AK309169|STK4|6789|serine/threonine kinase 4	AK225326|STK4|6789|serine/threonine kinase 4	BC005231|STK4|6789|serine/threonine kinase 4	BC015332|STK4|6789|serine/threonine kinase 4	BC038850|STK4|6789|serine/threonine kinase 4	CR933633|STK4|6789|serine/threonine kinase 4	BC093768|STK4|6789|serine/threonine kinase 4
hg18_v1_chr7_-_105304159_105304283	0.377687	CCAGUGU	AK095475|ATXN7L1|222255|ataxin 7-like 1	AK097574|ATXN7L1|222255|ataxin 7-like 1	BC030616|ATXN7L1|222255|ataxin 7-like 1	NM_020725|ATXN7L1|222255|ataxin 7-like 1	NM_152749|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr8_-_93144366_93144366	0.371393	CCAGUGU	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr3_+_161956689_161956689	0.367878	CCAGUGU	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L	NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg18_v1_chr8_-_13416554_13416799	0.364666	CCAGUGU	BC054511|DLC1|10395|deleted in liver cancer 1	AK291682|DLC1|10395|deleted in liver cancer 1	AK024773|DLC1|10395|deleted in liver cancer 1	AK225098|DLC1|10395|deleted in liver cancer 1	AB051510|DLC1|10395|deleted in liver cancer 1	BC049842|DLC1|10395|deleted in liver cancer 1	NM_024767|DLC1|10395|deleted in liver cancer 1	NM_182643|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr2_-_241860923_241861080	0.364596	CCAGUGU	NM_203346|HDLBP|3069|high density lipoprotein binding protein
hg18_v1_chr5_-_59819642_59819681	0.363818	CCAGUGU	AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr4_+_108965167_108965266	0.360544	CCAGUGU	AK290344|SGMS2|166929|sphingomyelin synthase 2	NM_001136258|SGMS2|166929|sphingomyelin synthase 2	AF452717|SGMS2|166929|sphingomyelin synthase 2
hg18_v1_chr7_-_105106844_105106844	0.351298	CCAGUGU	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr1_+_88922424_88922943	0.349846	CCAGUGU	NM_006256|PKN2|5586|protein kinase N2	AK300304|PKN2|5586|protein kinase N2	AK298595|PKN2|5586|protein kinase N2	BC125199|PKN2|5586|protein kinase N2	S75548|PKN2|5586|protein kinase N2	U33052|PKN2|5586|protein kinase N2
hg18_v1_chr9_+_131974506_131974763	0.349805	CCAGUGU	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg18_v1_chr7_-_27162688_27162853	0.34916	CCAGUGU	BC061916|HOXA7|3204|homeobox A7	AF026397|HOXA7|3204|homeobox A7	NM_006896|HOXA7|3204|homeobox A7
hg18_v1_chr11_+_35922106_35922269	0.34861	CCAGUGU	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3	BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3	BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3	AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3	AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3	AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3	NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3	BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3
hg18_v1_chr17_-_16059514_16059617	0.346742	CCAGUGU	BC056862|NCOR1|9611|nuclear receptor corepressor 1	BC035748|NCOR1|9611|nuclear receptor corepressor 1	BC142648|NCOR1|9611|nuclear receptor corepressor 1	BC026028|NCOR1|9611|nuclear receptor corepressor 1	AK307614|NCOR1|9611|nuclear receptor corepressor 1	AF044209|NCOR1|9611|nuclear receptor corepressor 1	BC050594|NCOR1|9611|nuclear receptor corepressor 1	BC068996|NCOR1|9611|nuclear receptor corepressor 1	BC058511|NCOR1|9611|nuclear receptor corepressor 1	BC107772|NCOR1|9611|nuclear receptor corepressor 1	NM_006311|NCOR1|9611|nuclear receptor corepressor 1
hg18_v1_chr22_-_19418954_19418954	0.345201	CCAGUGU	L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha
hg18_v1_chr1_-_21489235_21489355	0.344271	CCAGUGU	AB031742|ECE1|1889|endothelin converting enzyme 1	AJ130828|ECE1|1889|endothelin converting enzyme 1	AK304167|ECE1|1889|endothelin converting enzyme 1	NM_001113349|ECE1|1889|endothelin converting enzyme 1
hg18_v1_chr20_-_62071584_62071850	0.343216	CCAGUGU	BC125129|ZNF512B|57473|zinc finger protein 512B	BC125128|ZNF512B|57473|zinc finger protein 512B	NM_020713|ZNF512B|57473|zinc finger protein 512B
hg18_v1_chr1_-_154290112_154290166	0.342204	CCAGUGU	AB209566|UBQLN4|56893|ubiquilin 4	AK098368|UBQLN4|56893|ubiquilin 4	AK314413|UBQLN4|56893|ubiquilin 4	BC018403|UBQLN4|56893|ubiquilin 4	AK302895|UBQLN4|56893|ubiquilin 4	BC063841|UBQLN4|56893|ubiquilin 4	NM_020131|UBQLN4|56893|ubiquilin 4
hg18_v1_chr16_+_86193993_86194011	0.341142	CCAGUGU	NM_020655|JPH3|57338|junctophilin 3	BC036533|JPH3|57338|junctophilin 3
hg18_v1_chr19_+_44308224_44308347	0.340362	CCAGUGU	AK294586|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	NM_001014831|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	NM_001014832|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	NM_001014834|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	NM_001014835|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	NM_005884|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	AK293517|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	AK291839|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	AK300632|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	BC002921|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	BC034511|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	AK304651|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	BC011368|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	AL834236|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	BC025282|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	AF005046|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4	AB032968|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4
hg18_v1_chr19_+_50446391_50446686	0.333001	CCAGUGU	BC071948|MARK4|57787|MAP/microtubule affinity-regulating kinase 4	AK075272|MARK4|57787|MAP/microtubule affinity-regulating kinase 4	AY057448|MARK4|57787|MAP/microtubule affinity-regulating kinase 4	AB058763|MARK4|57787|MAP/microtubule affinity-regulating kinase 4	NM_031417|MARK4|57787|MAP/microtubule affinity-regulating kinase 4	AY120867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4
hg18_v1_chr1_+_242283129_242283204	0.332557	CCAGUGU	BC078175|ZNF238|10472|zinc finger protein 238	AJ001388|ZNF238|10472|zinc finger protein 238	NM_006352|ZNF238|10472|zinc finger protein 238
hg18_v1_chr2_+_99320181_99320449	0.328005	CCAGUGU	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr6_+_10629550_10629638	0.325413	CCAGUGU	AK307373|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	NM_145649|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	AK291767|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	AK310216|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	AL832714|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg18_v1_chr1_-_19155360_19155412	0.32451	CCAGUGU	NM_001136265|IFFO2|126917|intermediate filament family orphan 2
hg18_v1_chr1_+_28568643_28568981	0.324413	CCAGUGU	NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4	CR749449|PHACTR4|65979|phosphatase and actin regulator 4	AK025436|PHACTR4|65979|phosphatase and actin regulator 4	BC029266|PHACTR4|65979|phosphatase and actin regulator 4	BC016152|PHACTR4|65979|phosphatase and actin regulator 4	BC068508|PHACTR4|65979|phosphatase and actin regulator 4
hg18_v1_chr6_+_17390273_17390273	0.324311	CCAGUGU	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr21_+_39099717_39099777	0.320676	CCAGUGU	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr10_-_121292139_121292222	0.319467	CCAGUGU	BC009361|RGS10|6001|regulator of G-protein signaling 10	AK290773|RGS10|6001|regulator of G-protein signaling 10	NM_001005339|RGS10|6001|regulator of G-protein signaling 10
hg18_v1_chr16_+_31390567_31391045	0.315474	CCAGUGU	AK313327|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	NM_001042454|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	CR621063|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	CR616164|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	CR618748|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	AK122975|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	CR608842|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	CR618728|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	CR617942|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	CR624726|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	BC017288|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	NM_001164719|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1
hg18_v1_chr6_-_38715901_38715901	0.313274	CCAGUGU	NM_001099272|BTBD9|114781|BTB (POZ) domain containing 9	NM_052893|BTBD9|114781|BTB (POZ) domain containing 9
hg18_v1_chr7_-_104949787_104950008	0.311599	CCAGUGU	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg18_v1_chr20_+_30329096_30329199	0.31012	CCAGUGU	NM_004798|KIF3B|9371|kinesin family member 3B	AB002357|KIF3B|9371|kinesin family member 3B
hg18_v1_chr2_+_36436873_36436939	0.310071	CCAGUGU	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg18_v1_chr17_-_38229790_38229860	0.306131	CCAGUGU	AK223411|BECN1|8678|beclin 1, autophagy related	AK312651|BECN1|8678|beclin 1, autophagy related	BC010276|BECN1|8678|beclin 1, autophagy related	AF139131|BECN1|8678|beclin 1, autophagy related	BX647788|BECN1|8678|beclin 1, autophagy related	AK298619|BECN1|8678|beclin 1, autophagy related	AK299616|BECN1|8678|beclin 1, autophagy related	NM_003766|BECN1|8678|beclin 1, autophagy related
hg18_v1_chr20_+_5935897_5935901	0.305906	CCAGUGU	NM_001127458|CRLS1|54675|cardiolipin synthase 1	AK310368|CRLS1|54675|cardiolipin synthase 1
hg18_v1_chr9_-_122679387_122679455	0.296459	CCAGUGU	BC108663|PHF19|26147|PHD finger protein 19	NM_001009936|PHF19|26147|PHD finger protein 19	NM_015651|PHF19|26147|PHD finger protein 19
hg18_v1_chr22_+_38903825_38904066	0.295394	CCAGUGU	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B	NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B	AK296590|TNRC6B|23112|trinucleotide repeat containing 6B	AK294519|TNRC6B|23112|trinucleotide repeat containing 6B	AB029016|TNRC6B|23112|trinucleotide repeat containing 6B
hg18_v1_chr4_+_154345039_154345071	0.295127	CCAGUGU	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg18_v1_chrX_-_102973762_102973902	0.29397	CCAGUGU	AK313425|RAB9B|51209|RAB9B, member RAS oncogene family	AB036693|RAB9B|51209|RAB9B, member RAS oncogene family	BC041336|RAB9B|51209|RAB9B, member RAS oncogene family	BC070069|RAB9B|51209|RAB9B, member RAS oncogene family	NM_016370|RAB9B|51209|RAB9B, member RAS oncogene family
hg18_v1_chr3_-_114898003_114898202	0.292705	CCAGUGU	BC043383|KIAA2018|205717|KIAA2018	NM_001009899|KIAA2018|205717|KIAA2018
hg18_v1_chr9_-_106730256_106730346	0.2912	CCAGUGU	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg18_v1_chr5_+_137802531_137802723	0.290708	CCAGUGU	AK056193|REEP2|51308|receptor accessory protein 2	AK291101|REEP2|51308|receptor accessory protein 2	AK223611|REEP2|51308|receptor accessory protein 2	BC006218|REEP2|51308|receptor accessory protein 2	NM_016606|REEP2|51308|receptor accessory protein 2	AK293480|REEP2|51308|receptor accessory protein 2	AK290547|REEP2|51308|receptor accessory protein 2
hg18_v1_chr6_+_20510019_20510145	0.29014	CCAGUGU	BC099908|E2F3|1871|E2F transcription factor 3	NM_001949|E2F3|1871|E2F transcription factor 3	CR597993|E2F3|1871|E2F transcription factor 3
hg18_v1_chr6_+_53037754_53037754	0.289454	CCAGUGU	BC000650|FBXO9|26268|F-box protein 9	NM_033481|FBXO9|26268|F-box protein 9
hg18_v1_chr5_-_58331515_58331515	0.289358	CCAGUGU	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr12_-_49763566_49763715	0.288245	CCAGUGU	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr6_-_139654807_139654900	0.282956	CCAGUGU	BX647633|TXLNB|167838|taxilin beta	AL834248|TXLNB|167838|taxilin beta	AL831988|TXLNB|167838|taxilin beta	AK314725|TXLNB|167838|taxilin beta	BX647477|TXLNB|167838|taxilin beta	BC115383|TXLNB|167838|taxilin beta	BC115384|TXLNB|167838|taxilin beta	AB085905|TXLNB|167838|taxilin beta	NM_153235|TXLNB|167838|taxilin beta
hg18_v1_chr1_-_173428455_173428851	0.282675	CCAGUGU	D25539|KIAA0040|9674|KIAA0040	BC032361|KIAA0040|9674|KIAA0040	BC111699|KIAA0040|9674|KIAA0040	BC050374|KIAA0040|9674|KIAA0040	BC020789|KIAA0040|9674|KIAA0040	AL049799|KIAA0040|9674|KIAA0040	AK292691|KIAA0040|9674|KIAA0040	NM_001162895|KIAA0040|9674|KIAA0040	NM_014656|KIAA0040|9674|KIAA0040	AL049800|KIAA0040|9674|KIAA0040	CR625052|KIAA0040|9674|KIAA0040	NM_001162893|KIAA0040|9674|KIAA0040	NM_001162894|KIAA0040|9674|KIAA0040
hg18_v1_chr20_+_19818209_19818245	0.278583	CCAGUGU	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chrX_-_77281764_77281834	0.27842	CCAGUGU	DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	CR624765|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	CR625261|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa	NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg18_v1_chr20_-_33198721_33198849	0.277934	CCAGUGU	CR457266|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR594587|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR612837|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	BC016184|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR590035|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR600513|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR591753|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR593253|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	AK300212|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	AY358580|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR610779|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR602215|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR625751|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	BC001371|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	AK023931|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	AK303816|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	AK001645|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR598404|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	NM_001145025|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	NM_018217|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2	CR601922|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2
hg18_v1_chr1_+_24614831_24614950	0.276626	CCAGUGU	NM_020448|NIPAL3|57185|NIPA-like domain containing 3	CR626180|NIPAL3|57185|NIPA-like domain containing 3	AK312433|NIPAL3|57185|NIPA-like domain containing 3	BX640883|NIPAL3|57185|NIPA-like domain containing 3	CR601331|NIPAL3|57185|NIPA-like domain containing 3	BC012492|NIPAL3|57185|NIPA-like domain containing 3	BC001265|NIPAL3|57185|NIPA-like domain containing 3	CR597336|NIPAL3|57185|NIPA-like domain containing 3	BC063583|NIPAL3|57185|NIPA-like domain containing 3	U90918|NIPAL3|57185|NIPA-like domain containing 3
hg18_v1_chr22_+_28609064_28609194	0.27445	CCAGUGU	BC151217|MTMR3|8897|myotubularin related protein 3	AK289581|MTMR3|8897|myotubularin related protein 3	NM_021090|MTMR3|8897|myotubularin related protein 3	NM_153050|MTMR3|8897|myotubularin related protein 3	NM_153051|MTMR3|8897|myotubularin related protein 3
hg18_v1_chr9_-_133141726_133141754	0.274357	CCAGUGU	BC049388|FAM78A|286336|family with sequence similarity 78, member A	NM_033387|FAM78A|286336|family with sequence similarity 78, member A	AK095423|FAM78A|286336|family with sequence similarity 78, member A
hg18_v1_chr2_+_64604940_64605036	0.273327	CCAGUGU	NM_001002243|AFTPH|54812|aftiphilin	NM_017657|AFTPH|54812|aftiphilin	NM_203437|AFTPH|54812|aftiphilin	BC047529|AFTPH|54812|aftiphilin	AK000087|AFTPH|54812|aftiphilin	AK222821|AFTPH|54812|aftiphilin
hg18_v1_chr12_-_4624536_4624603	0.269467	CCAGUGU	AF087003|AKAP3|10566|A kinase (PRKA) anchor protein 3	U85715|AKAP3|10566|A kinase (PRKA) anchor protein 3	BC047535|AKAP3|10566|A kinase (PRKA) anchor protein 3	AF093408|AKAP3|10566|A kinase (PRKA) anchor protein 3	NM_006422|AKAP3|10566|A kinase (PRKA) anchor protein 3
hg18_v1_chr12_+_70434920_70434925	0.266921	CCAGUGU	BC021901|RAB21|23011|RAB21, member RAS oncogene family	BC092475|RAB21|23011|RAB21, member RAS oncogene family	AF091035|RAB21|23011|RAB21, member RAS oncogene family	NM_014999|RAB21|23011|RAB21, member RAS oncogene family
hg18_v1_chr12_+_120635021_120635233	0.262137	CCAGUGU	AK126568|TMEM120B|144404|transmembrane protein 120B	NM_001080825|TMEM120B|144404|transmembrane protein 120B	BC127768|TMEM120B|144404|transmembrane protein 120B	BC127769|TMEM120B|144404|transmembrane protein 120B	BC035884|TMEM120B|144404|transmembrane protein 120B
hg18_v1_chr17_-_39936453_39936543	0.257684	CCAGUGU	NM_001002909|GPATCH8|23131|G patch domain containing 8
hg18_v1_chr3_-_52694554_52695065	0.256287	CCAGUGU	AF197569|PBRM1|55193|polybromo 1	NM_018313|PBRM1|55193|polybromo 1
hg18_v1_chr5_+_139473873_139473950	0.253782	CCAGUGU	M96684|PURA|5813|purine-rich element binding protein A	NM_005859|PURA|5813|purine-rich element binding protein A	BC110574|PURA|5813|purine-rich element binding protein A	BC110594|PURA|5813|purine-rich element binding protein A	BC036087|PURA|5813|purine-rich element binding protein A	BT019388|PURA|5813|purine-rich element binding protein A
hg18_v1_chr11_-_27484874_27484903	0.25214	CCAGUGU	BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)	BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)	AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)	AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)	AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)	NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)
hg18_v1_chr6_+_10693964_10694036	0.25186	CCAGUGU	AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg18_v1_chr1_+_28458546_28458944	0.250751	CCAGUGU	NM_031459|SESN2|83667|sestrin 2	BC013304|SESN2|83667|sestrin 2	AY123223|SESN2|83667|sestrin 2	BC033719|SESN2|83667|sestrin 2	AL136551|SESN2|83667|sestrin 2	AK315710|SESN2|83667|sestrin 2	DQ892827|SESN2|83667|sestrin 2	DQ896073|SESN2|83667|sestrin 2	EU831582|SESN2|83667|sestrin 2	EU831667|SESN2|83667|sestrin 2
hg18_v1_chr17_-_41658493_41658516	0.250559	CCAGUGU	AK291259|KIAA1267|284058|KIAA1267	NM_001193465|KIAA1267|284058|KIAA1267
hg18_v1_chr1_+_191357680_191357742	0.244441	CCAGUGU	NM_024529|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg18_v1_chr7_+_7188667_7188878	0.243797	CCAGUGU	NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg18_v1_chr10_-_71600191_71600379	0.243316	CCAGUGU	AK298591|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	AK312469|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	BC003658|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	AF274026|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	AF087897|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	AF217959|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	AF261717|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	AY008268|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	AL136724|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	NM_001142648|SAR1A|56681|SAR1 homolog A (S. cerevisiae)	NM_020150|SAR1A|56681|SAR1 homolog A (S. cerevisiae)
hg18_v1_chr1_-_203916239_203916369	0.241566	CCAGUGU	AK313479|SLC45A3|85414|solute carrier family 45, member 3	AK290364|SLC45A3|85414|solute carrier family 45, member 3	NM_033102|SLC45A3|85414|solute carrier family 45, member 3
hg18_v1_chr8_-_92066613_92066664	0.240862	CCAGUGU	NM_001190972|LOC100127983|100127983|hypothetical protein LOC100127983
hg18_v1_chr4_+_154293719_154293719	0.240323	CCAGUGU	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg18_v1_chr7_-_148825829_148825833	0.237948	CCAGUGU	NM_001163474|ZNF746|155061|zinc finger protein 746	NM_152557|ZNF746|155061|zinc finger protein 746	AK128244|ZNF746|155061|zinc finger protein 746
hg18_v1_chr2_-_39517633_39517794	0.235295	CCAGUGU	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr2_+_219180875_219180887	0.233777	CCAGUGU	BC006355|PLCD4|84812|phospholipase C, delta 4	NM_032726|PLCD4|84812|phospholipase C, delta 4	AK023083|PLCD4|84812|phospholipase C, delta 4	AK297808|PLCD4|84812|phospholipase C, delta 4
hg18_v1_chr1_+_32889335_32889545	0.231574	CCAGUGU	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg18_v1_chr1_+_182622751_182622801	0.230921	CCAGUGU	NM_030806|C1orf21|81563|chromosome 1 open reading frame 21
hg18_v1_chr10_-_121286034_121286034	0.230715	CCAGUGU	CR592645|RGS10|6001|regulator of G-protein signaling 10	NM_002925|RGS10|6001|regulator of G-protein signaling 10
hg18_v1_chr20_-_31771550_31771800	0.230136	CCAGUGU	CR533471|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	EU832287|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	EU832372|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	BC001147|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK023879|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AF072864|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AL136648|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK301532|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK316589|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	AK297018|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	NM_007238|PXMP4|11264|peroxisomal membrane protein 4, 24kDa	NM_183397|PXMP4|11264|peroxisomal membrane protein 4, 24kDa
hg18_v1_chr10_-_73203202_73203423	0.230003	CCAGUGU	CR612511|C10orf54|64115|chromosome 10 open reading frame 54	BC020568|C10orf54|64115|chromosome 10 open reading frame 54	AY265805|C10orf54|64115|chromosome 10 open reading frame 54	EF506490|C10orf54|64115|chromosome 10 open reading frame 54	AK024449|C10orf54|64115|chromosome 10 open reading frame 54	CR614300|C10orf54|64115|chromosome 10 open reading frame 54	BC111048|C10orf54|64115|chromosome 10 open reading frame 54	CR604197|C10orf54|64115|chromosome 10 open reading frame 54	CR621313|C10orf54|64115|chromosome 10 open reading frame 54	CR595858|C10orf54|64115|chromosome 10 open reading frame 54	CR600781|C10orf54|64115|chromosome 10 open reading frame 54	CR610409|C10orf54|64115|chromosome 10 open reading frame 54	CR611971|C10orf54|64115|chromosome 10 open reading frame 54	CR614217|C10orf54|64115|chromosome 10 open reading frame 54	CR624628|C10orf54|64115|chromosome 10 open reading frame 54	CR626183|C10orf54|64115|chromosome 10 open reading frame 54	CR599757|C10orf54|64115|chromosome 10 open reading frame 54	CR598635|C10orf54|64115|chromosome 10 open reading frame 54	AY358379|C10orf54|64115|chromosome 10 open reading frame 54	NM_022153|C10orf54|64115|chromosome 10 open reading frame 54
hg18_v1_chr12_-_54938385_54938447	0.223474	CCAGUGU	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr2_-_164300758_164300768	0.222647	CCAGUGU	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg18_v1_chr8_-_93176618_93176665	0.221344	CCAGUGU	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr5_-_58370693_58371578	0.219584	CCAGUGU	U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr17_+_58440629_58440629	0.218738	CCAGUGU	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr1_-_152797707_152797759	0.218672	CCAGUGU	BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1
hg18_v1_chr4_+_7039789_7039919	0.217286	CCAGUGU	NM_001113363|TBC1D14|57533|TBC1 domain family, member 14
hg18_v1_chr9_+_130491291_130491337	0.217175	CCAGUGU	NM_003011|SET|6418|SET nuclear oncogene
hg18_v1_chr11_+_34029764_34029814	0.216741	CCAGUGU	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr2_-_202354139_202354139	0.21647	CCAGUGU	NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)	NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)
hg18_v1_chr10_+_69314944_69314966	0.213345	CCAGUGU	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg18_v1_chr1_+_145867122_145867170	0.212388	CCAGUGU	AK021758|GPR89A|653519|G protein-coupled receptor 89A	NM_016334|GPR89B|51463|G protein-coupled receptor 89B	AL133020|GPR89B|51463|G protein-coupled receptor 89B	AY358966|GPR89A|653519|G protein-coupled receptor 89A	AB097024|GPR89A|653519|G protein-coupled receptor 89A	AB097025|GPR89A|653519|G protein-coupled receptor 89A	AK223223|GPR89A|653519|G protein-coupled receptor 89A	AK299995|GPR89A|653519|G protein-coupled receptor 89A	AK302266|GPR89B|51463|G protein-coupled receptor 89B	BC067816|GPR89A|653519|G protein-coupled receptor 89A	AF132947|GPR89A|653519|G protein-coupled receptor 89A	U78723|GPR89B|51463|G protein-coupled receptor 89B
hg18_v1_chr19_-_12582493_12582629	0.210092	CCAGUGU	EU446833|ZNF490|57474|zinc finger protein 490	BC038586|ZNF490|57474|zinc finger protein 490	AB033024|ZNF490|57474|zinc finger protein 490	NM_020714|ZNF490|57474|zinc finger protein 490
hg18_v1_chr2_+_202024636_202024798	0.203326	CCAGUGU	AK027637|STRADB|55437|STE20-related kinase adaptor beta	NM_018571|STRADB|55437|STE20-related kinase adaptor beta	AK290457|STRADB|55437|STE20-related kinase adaptor beta	BC008302|STRADB|55437|STE20-related kinase adaptor beta	AY093697|STRADB|55437|STE20-related kinase adaptor beta	AB038950|STRADB|55437|STE20-related kinase adaptor beta	BC090871|STRADB|55437|STE20-related kinase adaptor beta
hg18_v1_chr2_+_210152609_210152669	0.203249	CCAGUGU	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr3_-_191321601_191321601	0.199533	CCAGUGU	NM_018192|LEPREL1|55214|leprecan-like 1
hg18_v1_chr19_+_7505590_7505641	0.198431	CCAGUGU	NM_001166111|PNPLA6|10908|patatin-like phospholipase domain containing 6	AK293807|PNPLA6|10908|patatin-like phospholipase domain containing 6	AK294021|PNPLA6|10908|patatin-like phospholipase domain containing 6	NM_001166113|PNPLA6|10908|patatin-like phospholipase domain containing 6	BC051768|PNPLA6|10908|patatin-like phospholipase domain containing 6
hg18_v1_chr1_+_165075345_165075394	0.198086	CCAGUGU	AB040946|POGK|57645|pogo transposable element with KRAB domain	NM_017542|POGK|57645|pogo transposable element with KRAB domain	AK056711|POGK|57645|pogo transposable element with KRAB domain	BC131624|POGK|57645|pogo transposable element with KRAB domain
hg18_v1_chr8_-_8788149_8788547	0.197995	CCAGUGU	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg18_v1_chr6_-_137155317_137155349	0.197373	CCAGUGU	NM_005923|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	U67156|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	BC088829|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5
hg18_v1_chr13_-_73605914_73606066	0.197299	CCAGUGU	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr7_+_127015650_127015827	0.196834	CCAGUGU	CR592093|ARF5|381|ADP-ribosylation factor 5	CR624513|ARF5|381|ADP-ribosylation factor 5	AK307297|ARF5|381|ADP-ribosylation factor 5	CR598890|ARF5|381|ADP-ribosylation factor 5	CR619680|ARF5|381|ADP-ribosylation factor 5	AK308548|ARF5|381|ADP-ribosylation factor 5	BC033104|ARF5|381|ADP-ribosylation factor 5	CR610040|ARF5|381|ADP-ribosylation factor 5	CR619021|ARF5|381|ADP-ribosylation factor 5	CR625498|ARF5|381|ADP-ribosylation factor 5	CR624558|ARF5|381|ADP-ribosylation factor 5	CR618126|ARF5|381|ADP-ribosylation factor 5	M57567|ARF5|381|ADP-ribosylation factor 5	AK297026|ARF5|381|ADP-ribosylation factor 5	AK312107|ARF5|381|ADP-ribosylation factor 5	CR619769|ARF5|381|ADP-ribosylation factor 5	BC003043|ARF5|381|ADP-ribosylation factor 5	NM_001662|ARF5|381|ADP-ribosylation factor 5	AF493884|ARF5|381|ADP-ribosylation factor 5	BT007087|ARF5|381|ADP-ribosylation factor 5	CR614865|ARF5|381|ADP-ribosylation factor 5
hg18_v1_chr12_-_119187932_119188014	0.194744	CCAGUGU	NM_001080855|PXN|5829|paxillin	NM_002859|PXN|5829|paxillin
hg18_v1_chr3_-_15515382_15515382	0.190854	CCAGUGU	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr6_+_24234328_24234490	0.189884	CCAGUGU	AK096290|NRSN1|140767|neurensin 1	NM_080723|NRSN1|140767|neurensin 1	AK314373|NRSN1|140767|neurensin 1	AK225775|NRSN1|140767|neurensin 1	AF418980|NRSN1|140767|neurensin 1	BC023514|NRSN1|140767|neurensin 1	AL833257|NRSN1|140767|neurensin 1	BC067291|NRSN1|140767|neurensin 1
hg18_v1_chr1_+_170768914_170769094	0.189754	CCAGUGU	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr1_-_46436695_46436729	0.188517	CCAGUGU	BC001471|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	NM_017739|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase
hg18_v1_chrX_+_47305459_47305564	0.187155	CCAGUGU	NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog
hg18_v1_chr2_+_75727415_75727477	0.185422	CCAGUGU	NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19	AK295578|MRPL19|9801|mitochondrial ribosomal protein L19	CR622228|MRPL19|9801|mitochondrial ribosomal protein L19	CR595766|MRPL19|9801|mitochondrial ribosomal protein L19	CR593472|MRPL19|9801|mitochondrial ribosomal protein L19	AK291250|MRPL19|9801|mitochondrial ribosomal protein L19	BC030144|MRPL19|9801|mitochondrial ribosomal protein L19	CR605824|MRPL19|9801|mitochondrial ribosomal protein L19	CR607194|MRPL19|9801|mitochondrial ribosomal protein L19	BC021051|MRPL19|9801|mitochondrial ribosomal protein L19	D14660|MRPL19|9801|mitochondrial ribosomal protein L19	DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19	DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19
hg18_v1_chrX_+_41077594_41077594	0.183848	CCAGUGU	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr1_+_26310854_26310999	0.183834	CCAGUGU	AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like	NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like	AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like	BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like
hg18_v1_chr1_+_170768635_170768896	0.182786	CCAGUGU	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr17_+_7402315_7402365	0.182361	CCAGUGU	NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13
hg18_v1_chr20_-_24921410_24921565	0.182178	CCAGUGU	NM_020531|C20orf3|57136|chromosome 20 open reading frame 3	AK301959|C20orf3|57136|chromosome 20 open reading frame 3
hg18_v1_chr4_+_140442118_140442404	0.181732	CCAGUGU	NM_057175|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC039818|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	AJ314788|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC093928|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	BC104806|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	AY112670|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	AK023387|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg18_v1_chr12_+_121885930_121886082	0.176249	CCAGUGU	AK298387|HIP1R|9026|huntingtin interacting protein 1 related	BC067085|HIP1R|9026|huntingtin interacting protein 1 related	NM_003959|HIP1R|9026|huntingtin interacting protein 1 related	AB014555|HIP1R|9026|huntingtin interacting protein 1 related
hg18_v1_chr2_+_151974849_151974920	0.174942	CCAGUGU	AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)	NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)
hg18_v1_chr1_+_89871231_89871236	0.173204	CCAGUGU	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr16_+_4948318_4948318	0.172595	CCAGUGU	AB007880|SEC14L5|9717|SEC14-like 5 (S. cerevisiae)	NM_014692|SEC14L5|9717|SEC14-like 5 (S. cerevisiae)
hg18_v1_chr1_+_210805319_210805319	0.171087	CCAGUGU	NM_001030287|ATF3|467|activating transcription factor 3
hg18_v1_chr3_-_48569213_48569326	0.170621	CCAGUGU	DQ891635|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	DQ894825|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	BC010269|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	NM_004567|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AF108765|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	D49818|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AK299097|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AK312623|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY707863|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY714243|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY756062|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY756063|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	AY756064|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
hg18_v1_chr2_+_151974630_151974722	0.170454	CCAGUGU	AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)	AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)	NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)	NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)	AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)	NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)	AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)	AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)	BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)	AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)	CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)
hg18_v1_chr10_-_15942461_15942537	0.170222	CCAGUGU	BC061585|FAM188A|80013|family with sequence similarity 188, member A	CR606283|FAM188A|80013|family with sequence similarity 188, member A	CR604819|FAM188A|80013|family with sequence similarity 188, member A	AF176916|FAM188A|80013|family with sequence similarity 188, member A	AL833873|FAM188A|80013|family with sequence similarity 188, member A	BC020605|FAM188A|80013|family with sequence similarity 188, member A	BC067799|FAM188A|80013|family with sequence similarity 188, member A	AK023459|FAM188A|80013|family with sequence similarity 188, member A	NM_024948|FAM188A|80013|family with sequence similarity 188, member A	CR598815|FAM188A|80013|family with sequence similarity 188, member A
hg18_v1_chr1_-_211031727_211031761	0.170075	CCAGUGU	DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)
hg18_v1_chr17_+_55051818_55051836	0.169856	CCAGUGU	NM_004859|CLTC|1213|clathrin, heavy chain (Hc)
hg18_v1_chr17_+_11864841_11864972	0.169542	CCAGUGU	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg18_v1_chr2_+_203901160_203901600	0.168226	CCAGUGU	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr12_-_117026038_117026229	0.168065	CCAGUGU	BC001437|VSIG10|54621|V-set and immunoglobulin domain containing 10	CR621447|VSIG10|54621|V-set and immunoglobulin domain containing 10	BC028698|VSIG10|54621|V-set and immunoglobulin domain containing 10	BC034471|VSIG10|54621|V-set and immunoglobulin domain containing 10	NM_019086|VSIG10|54621|V-set and immunoglobulin domain containing 10	AK000681|VSIG10|54621|V-set and immunoglobulin domain containing 10
hg18_v1_chr19_+_62949972_62949997	0.166705	CCAGUGU	AK299680|ZNF776|284309|zinc finger protein 776	NM_173632|ZNF776|284309|zinc finger protein 776
hg18_v1_chr22_-_19543069_19543074	0.166127	CCAGUGU	AB210002|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	NM_058004|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha
hg18_v1_chr19_+_11786077_11786135	0.163756	CCAGUGU	AK095252|ZNF440|126070|zinc finger protein 440	NM_152357|ZNF440|126070|zinc finger protein 440	BC035760|ZNF440|126070|zinc finger protein 440
hg18_v1_chr2_-_201644634_201644661	0.163102	CCAGUGU	AK124184|FAM126B|285172|family with sequence similarity 126, member B	BC039295|FAM126B|285172|family with sequence similarity 126, member B	NM_173822|FAM126B|285172|family with sequence similarity 126, member B
hg18_v1_chr9_-_127043455_127043615	0.162404	CCAGUGU	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr6_+_28217590_28217751	0.161803	CCAGUGU	AB208793|ZNF192|7745|zinc finger protein 192	BC096282|ZNF192|7745|zinc finger protein 192	BC096283|ZNF192|7745|zinc finger protein 192	BC096284|ZNF192|7745|zinc finger protein 192	BC130032|ZNF192|7745|zinc finger protein 192	NM_006298|ZNF192|7745|zinc finger protein 192	U57796|ZNF192|7745|zinc finger protein 192
hg18_v1_chr11_-_16454493_16454510	0.16173	CCAGUGU	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr17_-_41626032_41626140	0.161208	CCAGUGU	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr17_-_41625921_41625942	0.158672	CCAGUGU	BX538006|KIAA1267|284058|KIAA1267	NM_001193466|KIAA1267|284058|KIAA1267
hg18_v1_chr10_+_98582005_98582082	0.15822	CCAGUGU	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr9_+_130485754_130485897	0.157373	CCAGUGU	NM_001122821|SET|6418|SET nuclear oncogene	AK300794|SET|6418|SET nuclear oncogene
hg18_v1_chr4_-_74704964_74705203	0.157328	CCAGUGU	AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6
hg18_v1_chr1_+_216525251_216525259	0.15695	CCAGUGU	NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg18_v1_chr2_+_160277219_160277263	0.155247	CCAGUGU	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr12_-_40918417_40918459	0.154997	CCAGUGU	NM_001190979|YAF2|10138|YY1 associated factor 2	NM_001190980|YAF2|10138|YY1 associated factor 2	NM_005748|YAF2|10138|YY1 associated factor 2
hg18_v1_chr16_+_56219802_56220109	0.154553	CCAGUGU	AK312405|GPR56|9289|G protein-coupled receptor 56	NM_001145771|GPR56|9289|G protein-coupled receptor 56	NM_001145772|GPR56|9289|G protein-coupled receptor 56	NM_001145773|GPR56|9289|G protein-coupled receptor 56	NM_201524|GPR56|9289|G protein-coupled receptor 56	NM_201525|GPR56|9289|G protein-coupled receptor 56	AK075555|GPR56|9289|G protein-coupled receptor 56	AK299110|GPR56|9289|G protein-coupled receptor 56
hg18_v1_chr2_-_99238001_99238001	0.154528	CCAGUGU	NM_175735|LYG2|254773|lysozyme G-like 2
hg18_v1_chr16_+_30314555_30314616	0.154513	CCAGUGU	BC041388|ZNF48|197407|zinc finger protein 48	AK056313|ZNF48|197407|zinc finger protein 48	NM_152652|ZNF48|197407|zinc finger protein 48	EU446590|ZNF48|197407|zinc finger protein 48
hg18_v1_chr10_+_31650069_31650122	0.15405	CCAGUGU	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1	AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1	AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1
hg18_v1_chr10_+_99488223_99488290	0.150536	CCAGUGU	NM_001002261|ZFYVE27|118813|zinc finger, FYVE domain containing 27	AL834235|ZFYVE27|118813|zinc finger, FYVE domain containing 27
hg18_v1_chr6_-_35804337_35804337	0.14948	CCAGUGU	BC042605|FKBP5|2289|FK506 binding protein 5	NM_001145775|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr2_-_222145240_222145269	0.149192	CCAGUGU	BC026327|EPHA4|2043|EPH receptor A4	L36645|EPHA4|2043|EPH receptor A4	BC105000|EPHA4|2043|EPH receptor A4	BC105002|EPHA4|2043|EPH receptor A4	NM_004438|EPHA4|2043|EPH receptor A4	AK300772|EPHA4|2043|EPH receptor A4	AK225181|EPHA4|2043|EPH receptor A4	AK312380|EPHA4|2043|EPH receptor A4
hg18_v1_chr4_+_106287391_106287528	0.149005	CCAGUGU	NM_001127208|TET2|54790|tet oncogene family member 2	NM_017628|TET2|54790|tet oncogene family member 2	AK055149|TET2|54790|tet oncogene family member 2	BC150180|TET2|54790|tet oncogene family member 2	BC150201|TET2|54790|tet oncogene family member 2
hg18_v1_chr6_+_18263514_18263755	0.148608	CCAGUGU	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chr17_+_8279860_8279970	0.148561	CCAGUGU	AK299559|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	AF217798|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	AK056014|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	NM_001025579|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	NM_030808|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	CR600535|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	BC026101|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	AF182078|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1	AY004871|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1
hg18_v1_chr13_+_100902942_100903050	0.148498	CCAGUGU	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)
hg18_v1_chr17_+_32924049_32924083	0.14827	CCAGUGU	CR623161|DUSP14|11072|dual specificity phosphatase 14	CR598453|DUSP14|11072|dual specificity phosphatase 14	NM_007026|DUSP14|11072|dual specificity phosphatase 14	CR608141|DUSP14|11072|dual specificity phosphatase 14
hg18_v1_chr19_-_9982041_9982245	0.147634	CCAGUGU	AF177941|COL5A3|50509|collagen, type V, alpha 3	NM_015719|COL5A3|50509|collagen, type V, alpha 3
hg18_v1_chr12_+_52060689_52060694	0.147573	CCAGUGU	BC043224|SP1|6667|Sp1 transcription factor	NM_003109|SP1|6667|Sp1 transcription factor
hg18_v1_chr17_-_15407497_15407669	0.147499	CCAGUGU	BC011952|FAM18B2|201158|family with sequence similarity 18, member B2	AK303475|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 read-through transcript	AB074181|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 read-through transcript	AK310363|FAM18B2|201158|family with sequence similarity 18, member B2	NM_001135036|FAM18B2|201158|family with sequence similarity 18, member B2	NM_145301|FAM18B2|201158|family with sequence similarity 18, member B2
hg18_v1_chr5_-_179651664_179651701	0.14643	CCAGUGU	NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9	NM_002752|MAPK9|5601|mitogen-activated protein kinase 9	NM_139068|MAPK9|5601|mitogen-activated protein kinase 9	NM_139069|MAPK9|5601|mitogen-activated protein kinase 9	NM_139070|MAPK9|5601|mitogen-activated protein kinase 9
hg18_v1_chr16_-_70400393_70400566	0.145484	CCAGUGU	BC036283|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit	AK128078|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit	NM_001030007|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit	NM_001128|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit	AK314484|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit
hg18_v1_chr20_-_32163743_32163749	0.145398	CCAGUGU	NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
hg18_v1_chr19_+_4255590_4255741	0.144734	CCAGUGU	NM_024333|FSD1|79187|fibronectin type III and SPRY domain containing 1	AK315661|FSD1|79187|fibronectin type III and SPRY domain containing 1	AK295523|FSD1|79187|fibronectin type III and SPRY domain containing 1	AK303606|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR622875|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR603556|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR611611|FSD1|79187|fibronectin type III and SPRY domain containing 1	AY032617|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR610791|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR622179|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR623547|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR599769|FSD1|79187|fibronectin type III and SPRY domain containing 1	CR602397|FSD1|79187|fibronectin type III and SPRY domain containing 1	BC003124|FSD1|79187|fibronectin type III and SPRY domain containing 1	AK021750|FSD1|79187|fibronectin type III and SPRY domain containing 1	AF316829|FSD1|79187|fibronectin type III and SPRY domain containing 1	DQ891833|FSD1|79187|fibronectin type III and SPRY domain containing 1	DQ895020|FSD1|79187|fibronectin type III and SPRY domain containing 1
hg18_v1_chr17_-_15104768_15104843	0.142888	CCAGUGU	CR541931|PMP22|5376|peripheral myelin protein 22	CR541953|PMP22|5376|peripheral myelin protein 22	M94048|PMP22|5376|peripheral myelin protein 22	NM_153322|PMP22|5376|peripheral myelin protein 22	S61788|PMP22|5376|peripheral myelin protein 22	CR612069|PMP22|5376|peripheral myelin protein 22
hg18_v1_chr19_+_50004134_50004258	0.140041	CCAGUGU	NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)
hg18_v1_chr10_+_75427853_75427971	0.139932	CCAGUGU	AK304823|VCL|7414|vinculin	NM_003373|VCL|7414|vinculin	NM_014000|VCL|7414|vinculin	AK300280|VCL|7414|vinculin	AK296509|VCL|7414|vinculin	BC039174|VCL|7414|vinculin	M33308|VCL|7414|vinculin	DQ894680|VCL|7414|vinculin
hg18_v1_chr22_-_35745403_35745453	0.1395	CCAGUGU	D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)	AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)	BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)	AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)	AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)	AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)	NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)
hg18_v1_chr8_+_110415725_110415813	0.139496	CCAGUGU	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg18_v1_chr15_+_41906403_41906555	0.137939	CCAGUGU	NM_001167941|WDR76|79968|WD repeat domain 76	NM_024908|WDR76|79968|WD repeat domain 76	AK290933|WDR76|79968|WD repeat domain 76	BC025247|WDR76|79968|WD repeat domain 76	AK023035|WDR76|79968|WD repeat domain 76	BC051855|WDR76|79968|WD repeat domain 76	EF011624|WDR76|79968|WD repeat domain 76	CR595259|WDR76|79968|WD repeat domain 76
hg18_v1_chr2_+_238200922_238201274	0.136722	CCAGUGU	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg18_v1_chr12_+_50104859_50104871	0.134031	CCAGUGU	AK299545|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8	NM_001039960|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8	NM_004858|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8	DQ063579|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8
hg18_v1_chr12_-_40918249_40918355	0.132387	CCAGUGU	EU446625|YAF2|10138|YY1 associated factor 2	EU446756|YAF2|10138|YY1 associated factor 2	BC037777|YAF2|10138|YY1 associated factor 2	AK127531|YAF2|10138|YY1 associated factor 2	AK291355|YAF2|10138|YY1 associated factor 2	AK296191|YAF2|10138|YY1 associated factor 2	AK294260|YAF2|10138|YY1 associated factor 2	NM_001190977|YAF2|10138|YY1 associated factor 2
hg18_v1_chr1_+_27433593_27433650	0.131416	CCAGUGU	NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1
hg18_v1_chr12_+_50631704_50631721	0.13092	CCAGUGU	BC040531|ACVR1B|91|activin A receptor, type IB	NM_004302|ACVR1B|91|activin A receptor, type IB	NM_020328|ACVR1B|91|activin A receptor, type IB
hg18_v1_chr7_+_90176647_90176791	0.130107	CCAGUGU	AB020641|CDK14|5218|cyclin-dependent kinase 14	BC152436|CDK14|5218|cyclin-dependent kinase 14	BC167152|CDK14|5218|cyclin-dependent kinase 14	BC167156|CDK14|5218|cyclin-dependent kinase 14	NM_012395|CDK14|5218|cyclin-dependent kinase 14	BC136477|CDK14|5218|cyclin-dependent kinase 14	AK289782|CDK14|5218|cyclin-dependent kinase 14	BC152388|CDK14|5218|cyclin-dependent kinase 14
hg18_v1_chr2_+_209996913_209997085	0.128381	CCAGUGU	NM_001039538|MAP2|4133|microtubule-associated protein 2	BC038857|MAP2|4133|microtubule-associated protein 2	BC066648|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr17_+_6599879_6599879	0.127952	CCAGUGU	NM_017523|XAF1|54739|XIAP associated factor 1	NM_199139|XAF1|54739|XIAP associated factor 1
hg18_v1_chrX_-_50573759_50573943	0.127691	CCAGUGU	AB033028|SHROOM4|57477|shroom family member 4	BC151240|SHROOM4|57477|shroom family member 4	NM_020717|SHROOM4|57477|shroom family member 4
hg18_v1_chr11_+_119712827_119712827	0.126332	CCAGUGU	BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12
hg18_v1_chr17_-_30414789_30414871	0.125581	CCAGUGU	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg18_v1_chr2_+_153282631_153282757	0.123849	CCAGUGU	CR600798|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6	NM_152522|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6	AK023109|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6
hg18_v1_chr16_-_3567354_3567447	0.12193	CCAGUGU	AY601811|NLRC3|197358|NLR family, CARD domain containing 3	NM_178844|NLRC3|197358|NLR family, CARD domain containing 3	AK090431|NLRC3|197358|NLR family, CARD domain containing 3	AK090476|NLRC3|197358|NLR family, CARD domain containing 3
hg18_v1_chr20_-_38751289_38751294	0.120059	CCAGUGU	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
hg18_v1_chr20_+_5934560_5934760	0.119651	CCAGUGU	NM_019095|CRLS1|54675|cardiolipin synthase 1
hg18_v1_chr12_+_67919583_67919618	0.119149	CCAGUGU	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr6_+_42126228_42126241	0.118449	CCAGUGU	BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
hg18_v1_chr1_-_177465437_177465448	0.117023	CCAGUGU	AK311045|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136001|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168236|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168237|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168238|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_007314|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chr19_-_42962039_42962069	0.116889	CCAGUGU	BC064962|ZNF573|126231|zinc finger protein 573	AK074539|ZNF573|126231|zinc finger protein 573	NM_001172689|ZNF573|126231|zinc finger protein 573	NM_001172690|ZNF573|126231|zinc finger protein 573	NM_001172691|ZNF573|126231|zinc finger protein 573	NM_001172692|ZNF573|126231|zinc finger protein 573	NM_152360|ZNF573|126231|zinc finger protein 573
hg18_v1_chr17_+_43082273_43082293	0.116725	CCAGUGU	L38951|KPNB1|3837|karyopherin (importin) beta 1	NM_002265|KPNB1|3837|karyopherin (importin) beta 1
hg18_v1_chr1_+_9217444_9217565	0.115913	CCAGUGU	AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
hg18_v1_chr10_+_97793054_97793689	0.110235	CCAGUGU	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr17_-_6484970_6484970	0.110093	CCAGUGU	NM_014804|KIAA0753|9851|KIAA0753
hg18_v1_chr12_-_121473036_121473345	0.108021	CCAGUGU	X64838|CLIP1|6249|CAP-GLY domain containing linker protein 1	M97501|CLIP1|6249|CAP-GLY domain containing linker protein 1	NM_002956|CLIP1|6249|CAP-GLY domain containing linker protein 1	NM_198240|CLIP1|6249|CAP-GLY domain containing linker protein 1
hg18_v1_chr12_-_118799457_118799496	0.106285	CCAGUGU	AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)
hg18_v1_chr6_-_132314004_132314211	0.106009	CCAGUGU	BT019794|CTGF|1490|connective tissue growth factor	BT019795|CTGF|1490|connective tissue growth factor	CR541734|CTGF|1490|connective tissue growth factor	CR541759|CTGF|1490|connective tissue growth factor	AY550024|CTGF|1490|connective tissue growth factor	AY395801|CTGF|1490|connective tissue growth factor	M92934|CTGF|1490|connective tissue growth factor	X78947|CTGF|1490|connective tissue growth factor	BC087839|CTGF|1490|connective tissue growth factor	AK125220|CTGF|1490|connective tissue growth factor	AK290884|CTGF|1490|connective tissue growth factor	AK315207|CTGF|1490|connective tissue growth factor	AK092280|CTGF|1490|connective tissue growth factor	NM_001901|CTGF|1490|connective tissue growth factor
hg18_v1_chr3_-_15081810_15081827	0.105008	CCAGUGU	NM_022497|MRPS25|64432|mitochondrial ribosomal protein S25	AK298791|MRPS25|64432|mitochondrial ribosomal protein S25
hg18_v1_chr22_-_20637212_20637251	0.104321	CCAGUGU	AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F	NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg18_v1_chr1_+_36462583_36462620	0.103688	CCAGUGU	NM_005119|THRAP3|9967|thyroid hormone receptor associated protein 3
hg18_v1_chr12_+_103133631_103133710	0.102432	CCAGUGU	NM_001093771|TXNRD1|7296|thioredoxin reductase 1	AK304241|TXNRD1|7296|thioredoxin reductase 1	AY057105|TXNRD1|7296|thioredoxin reductase 1
hg18_v1_chr8_+_42247991_42247994	0.102093	CCAGUGU	AK302723|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	AK303294|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	AK316418|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	BC006231|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	AK091297|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
hg18_v1_chr2_+_157001072_157001153	0.101317	CCAGUGU	NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg18_v1_chr6_-_13922525_13922969	0.101078	CCAGUGU	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chrX_+_40829802_40829831	0.100513	CCAGUGU	NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked	NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked
hg18_v1_chr3_-_48105637_48105772	0.0993727	CCAGUGU	AK054577|MAP4|4134|microtubule-associated protein 4	NM_001134364|MAP4|4134|microtubule-associated protein 4	NM_002375|MAP4|4134|microtubule-associated protein 4	NM_030885|MAP4|4134|microtubule-associated protein 4
hg18_v1_chr21_-_33065849_33066042	0.0993315	CCAGUGU	AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1	CR603496|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1
hg18_v1_chr7_+_4688248_4688481	0.0991833	CCAGUGU	NM_001037165|FOXK1|221937|forkhead box K1
hg18_v1_chr20_-_49818306_49818364	0.0986299	CCAGUGU	NM_006045|ATP9A|10079|ATPase, class II, type 9A
hg18_v1_chr15_+_71763674_71763701	0.0977609	CCAGUGU	BC062581|CD276|80381|CD276 molecule	NM_001024736|CD276|80381|CD276 molecule	NM_025240|CD276|80381|CD276 molecule
hg18_v1_chr12_+_50592379_50592524	0.0943548	CCAGUGU	NM_001077401|ACVRL1|94|activin A receptor type II-like 1	CR599504|ACVRL1|94|activin A receptor type II-like 1	AK303331|ACVRL1|94|activin A receptor type II-like 1	L17075|ACVRL1|94|activin A receptor type II-like 1	BC042637|ACVRL1|94|activin A receptor type II-like 1
hg18_v1_chr17_-_77094375_77094425	0.0936078	CCAGUGU	BC001920|ACTG1|71|actin, gamma 1	BC015779|ACTG1|71|actin, gamma 1	CR595991|ACTG1|71|actin, gamma 1	CR620790|ACTG1|71|actin, gamma 1	CR610111|ACTG1|71|actin, gamma 1	CR612408|ACTG1|71|actin, gamma 1	CR623642|ACTG1|71|actin, gamma 1	CR590591|ACTG1|71|actin, gamma 1	CR594098|ACTG1|71|actin, gamma 1	CR598828|ACTG1|71|actin, gamma 1	CR610162|ACTG1|71|actin, gamma 1	CR610710|ACTG1|71|actin, gamma 1	CR612488|ACTG1|71|actin, gamma 1	CR612527|ACTG1|71|actin, gamma 1	CR613019|ACTG1|71|actin, gamma 1	CR615078|ACTG1|71|actin, gamma 1	CR615292|ACTG1|71|actin, gamma 1	CR615976|ACTG1|71|actin, gamma 1	CR617657|ACTG1|71|actin, gamma 1	CR618764|ACTG1|71|actin, gamma 1	CR626452|ACTG1|71|actin, gamma 1	BC053572|ACTG1|71|actin, gamma 1	CR600687|ACTG1|71|actin, gamma 1	CR591798|ACTG1|71|actin, gamma 1	CR594425|ACTG1|71|actin, gamma 1	CR595246|ACTG1|71|actin, gamma 1	CR595791|ACTG1|71|actin, gamma 1	CR596062|ACTG1|71|actin, gamma 1	CR596102|ACTG1|71|actin, gamma 1	CR596522|ACTG1|71|actin, gamma 1	CR597843|ACTG1|71|actin, gamma 1	CR599592|ACTG1|71|actin, gamma 1	CR599978|ACTG1|71|actin, gamma 1	CR600128|ACTG1|71|actin, gamma 1	CR601583|ACTG1|71|actin, gamma 1	CR602480|ACTG1|71|actin, gamma 1	CR602599|ACTG1|71|actin, gamma 1	CR604033|ACTG1|71|actin, gamma 1	CR606124|ACTG1|71|actin, gamma 1	CR606241|ACTG1|71|actin, gamma 1	CR606346|ACTG1|71|actin, gamma 1	CR609318|ACTG1|71|actin, gamma 1	CR610496|ACTG1|71|actin, gamma 1	CR610665|ACTG1|71|actin, gamma 1	CR611108|ACTG1|71|actin, gamma 1	CR611432|ACTG1|71|actin, gamma 1	CR611536|ACTG1|71|actin, gamma 1	CR612114|ACTG1|71|actin, gamma 1	CR612705|ACTG1|71|actin, gamma 1	CR614439|ACTG1|71|actin, gamma 1	CR614891|ACTG1|71|actin, gamma 1	CR615028|ACTG1|71|actin, gamma 1	CR616983|ACTG1|71|actin, gamma 1	CR617404|ACTG1|71|actin, gamma 1	CR617643|ACTG1|71|actin, gamma 1	CR617915|ACTG1|71|actin, gamma 1	CR619691|ACTG1|71|actin, gamma 1	CR619966|ACTG1|71|actin, gamma 1	CR620836|ACTG1|71|actin, gamma 1	BC015005|ACTG1|71|actin, gamma 1	CR591159|ACTG1|71|actin, gamma 1	CR595688|ACTG1|71|actin, gamma 1	CR596065|ACTG1|71|actin, gamma 1	CR598534|ACTG1|71|actin, gamma 1	CR609723|ACTG1|71|actin, gamma 1	CR612862|ACTG1|71|actin, gamma 1	CR616609|ACTG1|71|actin, gamma 1	CR616966|ACTG1|71|actin, gamma 1	CR617867|ACTG1|71|actin, gamma 1	CR619914|ACTG1|71|actin, gamma 1	CR620218|ACTG1|71|actin, gamma 1	BC009848|ACTG1|71|actin, gamma 1	CR597515|ACTG1|71|actin, gamma 1	CR592121|ACTG1|71|actin, gamma 1	CR592736|ACTG1|71|actin, gamma 1	CR593892|ACTG1|71|actin, gamma 1	CR601927|ACTG1|71|actin, gamma 1	CR602348|ACTG1|71|actin, gamma 1	CR610810|ACTG1|71|actin, gamma 1	CR625364|ACTG1|71|actin, gamma 1	CR626577|ACTG1|71|actin, gamma 1	BC010999|ACTG1|71|actin, gamma 1	CR597492|ACTG1|71|actin, gamma 1	CR597615|ACTG1|71|actin, gamma 1	CR597885|ACTG1|71|actin, gamma 1	CR599672|ACTG1|71|actin, gamma 1	CR612443|ACTG1|71|actin, gamma 1	CR617232|ACTG1|71|actin, gamma 1	CR620630|ACTG1|71|actin, gamma 1	BC007442|ACTG1|71|actin, gamma 1	BC012050|ACTG1|71|actin, gamma 1	BC018774|ACTG1|71|actin, gamma 1	CR590228|ACTG1|71|actin, gamma 1	CR590320|ACTG1|71|actin, gamma 1	CR590603|ACTG1|71|actin, gamma 1	CR591211|ACTG1|71|actin, gamma 1	CR592707|ACTG1|71|actin, gamma 1	CR594922|ACTG1|71|actin, gamma 1	CR595093|ACTG1|71|actin, gamma 1	CR595449|ACTG1|71|actin, gamma 1	CR597397|ACTG1|71|actin, gamma 1	CR597456|ACTG1|71|actin, gamma 1	CR598076|ACTG1|71|actin, gamma 1	CR598244|ACTG1|71|actin, gamma 1	CR598734|ACTG1|71|actin, gamma 1	CR599814|ACTG1|71|actin, gamma 1	CR599830|ACTG1|71|actin, gamma 1	CR599892|ACTG1|71|actin, gamma 1	CR605191|ACTG1|71|actin, gamma 1	CR608951|ACTG1|71|actin, gamma 1	CR609271|ACTG1|71|actin, gamma 1	CR609909|ACTG1|71|actin, gamma 1	CR610691|ACTG1|71|actin, gamma 1	CR611607|ACTG1|71|actin, gamma 1	CR612364|ACTG1|71|actin, gamma 1	CR614730|ACTG1|71|actin, gamma 1	CR616006|ACTG1|71|actin, gamma 1	CR616940|ACTG1|71|actin, gamma 1	CR616969|ACTG1|71|actin, gamma 1	CR618617|ACTG1|71|actin, gamma 1	CR619367|ACTG1|71|actin, gamma 1	CR619574|ACTG1|71|actin, gamma 1	CR620806|ACTG1|71|actin, gamma 1	CR621813|ACTG1|71|actin, gamma 1	CR621873|ACTG1|71|actin, gamma 1	CR622814|ACTG1|71|actin, gamma 1	CR623020|ACTG1|71|actin, gamma 1	CR623123|ACTG1|71|actin, gamma 1	CR625920|ACTG1|71|actin, gamma 1	BC015695|ACTG1|71|actin, gamma 1	CR590980|ACTG1|71|actin, gamma 1	CR591079|ACTG1|71|actin, gamma 1	CR591509|ACTG1|71|actin, gamma 1	CR591533|ACTG1|71|actin, gamma 1	CR594416|ACTG1|71|actin, gamma 1	CR596618|ACTG1|71|actin, gamma 1	CR598395|ACTG1|71|actin, gamma 1	CR600669|ACTG1|71|actin, gamma 1	CR600832|ACTG1|71|actin, gamma 1	CR602399|ACTG1|71|actin, gamma 1	CR609414|ACTG1|71|actin, gamma 1	CR615214|ACTG1|71|actin, gamma 1	CR615511|ACTG1|71|actin, gamma 1	CR621190|ACTG1|71|actin, gamma 1	CR603777|ACTG1|71|actin, gamma 1	CR604825|ACTG1|71|actin, gamma 1	CR606117|ACTG1|71|actin, gamma 1	CR621390|ACTG1|71|actin, gamma 1	CR592239|ACTG1|71|actin, gamma 1	CR592652|ACTG1|71|actin, gamma 1	CR592730|ACTG1|71|actin, gamma 1	CR594198|ACTG1|71|actin, gamma 1	CR596575|ACTG1|71|actin, gamma 1	CR598831|ACTG1|71|actin, gamma 1	CR598898|ACTG1|71|actin, gamma 1	CR602227|ACTG1|71|actin, gamma 1	CR603085|ACTG1|71|actin, gamma 1	CR603639|ACTG1|71|actin, gamma 1	CR603981|ACTG1|71|actin, gamma 1	CR604519|ACTG1|71|actin, gamma 1	CR605598|ACTG1|71|actin, gamma 1	CR606439|ACTG1|71|actin, gamma 1	CR609401|ACTG1|71|actin, gamma 1	CR611433|ACTG1|71|actin, gamma 1	CR615212|ACTG1|71|actin, gamma 1	CR618978|ACTG1|71|actin, gamma 1	CR620121|ACTG1|71|actin, gamma 1	CR621747|ACTG1|71|actin, gamma 1	CR623145|ACTG1|71|actin, gamma 1	CR624265|ACTG1|71|actin, gamma 1	CR625300|ACTG1|71|actin, gamma 1	CR590376|ACTG1|71|actin, gamma 1	CR594480|ACTG1|71|actin, gamma 1	CR594511|ACTG1|71|actin, gamma 1	CR595096|ACTG1|71|actin, gamma 1	CR597169|ACTG1|71|actin, gamma 1	CR599678|ACTG1|71|actin, gamma 1	CR600758|ACTG1|71|actin, gamma 1	CR602472|ACTG1|71|actin, gamma 1	CR604384|ACTG1|71|actin, gamma 1	CR604531|ACTG1|71|actin, gamma 1	CR605767|ACTG1|71|actin, gamma 1	CR607909|ACTG1|71|actin, gamma 1	CR611625|ACTG1|71|actin, gamma 1	CR615291|ACTG1|71|actin, gamma 1	CR619007|ACTG1|71|actin, gamma 1	CR622024|ACTG1|71|actin, gamma 1	CR622438|ACTG1|71|actin, gamma 1	CR624836|ACTG1|71|actin, gamma 1	BC000292|ACTG1|71|actin, gamma 1	CR613104|ACTG1|71|actin, gamma 1	AK304637|ACTG1|71|actin, gamma 1	AK291937|ACTG1|71|actin, gamma 1	AK301175|ACTG1|71|actin, gamma 1	X04098|ACTG1|71|actin, gamma 1	NM_001614|ACTG1|71|actin, gamma 1	CR622164|ACTG1|71|actin, gamma 1
hg18_v1_chr16_+_70437394_70437451	0.0929494	CCAGUGU	NM_001137675|ATXN1L|342371|ataxin 1-like
hg18_v1_chr1_+_165564904_165564941	0.0927277	CCAGUGU	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr1_+_165456572_165456790	0.0926438	CCAGUGU	NM_001198786|POU2F1|5451|POU class 2 homeobox 1	NM_002697|POU2F1|5451|POU class 2 homeobox 1	AK302525|POU2F1|5451|POU class 2 homeobox 1	AK303201|POU2F1|5451|POU class 2 homeobox 1	AK308004|POU2F1|5451|POU class 2 homeobox 1	AK091438|POU2F1|5451|POU class 2 homeobox 1	BC052274|POU2F1|5451|POU class 2 homeobox 1	X13403|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr16_-_56886380_56886451	0.0924065	CCAGUGU	AK302175|PRSS54|221191|protease, serine, 54	AK058068|PRSS54|221191|protease, serine, 54	BC057843|PRSS54|221191|protease, serine, 54	NM_001080492|PRSS54|221191|protease, serine, 54
hg18_v1_chr3_-_150286812_150287092	0.0922345	CCAGUGU	AB209052|HLTF|6596|helicase-like transcription factor	EU446704|HLTF|6596|helicase-like transcription factor	AK291231|HLTF|6596|helicase-like transcription factor	L34673|HLTF|6596|helicase-like transcription factor	BC015498|HLTF|6596|helicase-like transcription factor	BC005260|HLTF|6596|helicase-like transcription factor	BC044659|HLTF|6596|helicase-like transcription factor	BC014326|HLTF|6596|helicase-like transcription factor	BC030976|HLTF|6596|helicase-like transcription factor	NM_003071|HLTF|6596|helicase-like transcription factor	NM_139048|HLTF|6596|helicase-like transcription factor
hg18_v1_chr17_+_43328514_43328645	0.0908727	CCAGUGU	NM_003110|SP2|6668|Sp2 transcription factor	BC005914|SP2|6668|Sp2 transcription factor	BC016680|SP2|6668|Sp2 transcription factor	BC033814|SP2|6668|Sp2 transcription factor
hg18_v1_chr14_+_67069668_67069784	0.0904304	CCAGUGU	AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
hg18_v1_chr1_+_26433200_26433284	0.0904076	CCAGUGU	AK024038|CCDC21|64793|coiled-coil domain containing 21	AK299312|CCDC21|64793|coiled-coil domain containing 21	BC064528|CCDC21|64793|coiled-coil domain containing 21	NM_022778|CCDC21|64793|coiled-coil domain containing 21
hg18_v1_chr9_+_104797413_104797483	0.0903582	CCAGUGU	BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2
hg18_v1_chr17_-_52346397_52346410	0.0896806	CCAGUGU	CR617665|TRIM25|7706|tripartite motif containing 25	NM_005082|TRIM25|7706|tripartite motif containing 25
hg18_v1_chrX_-_128804972_128805241	0.0886728	CCAGUGU	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr3_+_144203061_144203180	0.0882589	CCAGUGU	NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing	BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing	AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing	BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing	BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing	AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing	BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing
hg18_v1_chr2_-_210744158_210744432	0.0872579	CCAGUGU	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr1_-_180822686_180822730	0.0868096	CCAGUGU	BC114433|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	BC115697|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
hg18_v1_chr8_+_144751216_144751217	0.0861348	CCAGUGU	NM_032862|TIGD5|84948|tigger transposable element derived 5	AK223583|TIGD5|84948|tigger transposable element derived 5
hg18_v1_chr11_-_34336102_34336160	0.084982	CCAGUGU	AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2	NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2
hg18_v1_chr14_+_76297885_76298532	0.0847157	CCAGUGU	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg18_v1_chr17_+_43480674_43480722	0.0843522	CCAGUGU	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr3_-_198948110_198948256	0.0842503	CCAGUGU	BC033615|KIAA0226|9711|KIAA0226	NM_014687|KIAA0226|9711|KIAA0226
hg18_v1_chr10_-_101935676_101935776	0.0837423	CCAGUGU	NM_006459|ERLIN1|10613|ER lipid raft associated 1	AK222480|ERLIN1|10613|ER lipid raft associated 1	AK298427|ERLIN1|10613|ER lipid raft associated 1	AK315580|ERLIN1|10613|ER lipid raft associated 1
hg18_v1_chr11_+_82582938_82583334	0.0827974	CCAGUGU	BX648690|ANKRD42|338699|ankyrin repeat domain 42	NM_182603|ANKRD42|338699|ankyrin repeat domain 42	DQ508815|ANKRD42|338699|ankyrin repeat domain 42	AK095193|ANKRD42|338699|ankyrin repeat domain 42	BC171752|ANKRD42|338699|ankyrin repeat domain 42
hg18_v1_chr10_-_43212166_43212284	0.0818265	CCAGUGU	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chr1_-_23999478_23999681	0.0783668	CCAGUGU	L41668|GALE|2582|UDP-galactose-4-epimerase	NM_000403|GALE|2582|UDP-galactose-4-epimerase	CR616462|GALE|2582|UDP-galactose-4-epimerase
hg18_v1_chr10_+_69314347_69314480	0.0772778	CCAGUGU	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg18_v1_chr13_-_32757835_32757900	0.0770709	CCAGUGU	AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr8_+_90983934_90984000	0.0769912	CCAGUGU	BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2
hg18_v1_chr17_+_8154864_8154884	0.0764563	CCAGUGU	AK300327|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	NM_025014|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AB020722|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg18_v1_chr6_+_53038181_53038380	0.076328	CCAGUGU	CR625061|FBXO9|26268|F-box protein 9	CR603015|FBXO9|26268|F-box protein 9	AL137520|FBXO9|26268|F-box protein 9	NM_033480|FBXO9|26268|F-box protein 9
hg18_v1_chr14_+_102313566_102313579	0.0762403	CCAGUGU	NM_003300|TRAF3|7187|TNF receptor-associated factor 3	NM_145725|TRAF3|7187|TNF receptor-associated factor 3	NM_145726|TRAF3|7187|TNF receptor-associated factor 3	U21092|TRAF3|7187|TNF receptor-associated factor 3
hg18_v1_chr20_+_11819364_11819535	0.0748453	CCAGUGU	AK299281|BTBD3|22903|BTB (POZ) domain containing 3	NM_181443|BTBD3|22903|BTB (POZ) domain containing 3
hg18_v1_chr3_-_143230124_143230196	0.0743937	CCAGUGU	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr7_+_77266017_77266137	0.0741555	CCAGUGU	NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2	AK225854|PHTF2|57157|putative homeodomain transcription factor 2	AK090643|PHTF2|57157|putative homeodomain transcription factor 2	AK308289|PHTF2|57157|putative homeodomain transcription factor 2	CR626078|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chr6_+_43845915_43846077	0.0728074	CCAGUGU	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr22_-_30018329_30018519	0.0720303	CCAGUGU	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR623813|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR608796|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR626709|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR612619|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	CR612099|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1
hg18_v1_chr21_-_39642880_39642920	0.0707541	CCAGUGU	CR597521|HMGN1|3150|high-mobility group nucleosome binding domain 1	NM_004965|HMGN1|3150|high-mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high-mobility group nucleosome binding domain 1
hg18_v1_chr5_+_10617431_10617453	0.0706235	CCAGUGU	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B
hg18_v1_chr17_+_34279637_34279643	0.0705645	CCAGUGU	NM_006148|LASP1|3927|LIM and SH3 protein 1
hg18_v1_chr1_-_150148608_150148736	0.0701718	CCAGUGU	BC065277|THEM4|117145|thioesterase superfamily member 4	NM_053055|THEM4|117145|thioesterase superfamily member 4
hg18_v1_chr17_-_37221976_37221976	0.0701607	CCAGUGU	NM_006455|LEPREL4|10609|leprecan-like 4
hg18_v1_chr17_-_24940728_24940737	0.0683878	CCAGUGU	BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1	NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1	NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1
hg18_v1_chr17_-_32840875_32841101	0.0683792	CCAGUGU	AK308905|ACACA|31|acetyl-CoA carboxylase alpha	AY315623|ACACA|31|acetyl-CoA carboxylase alpha	AY315625|ACACA|31|acetyl-CoA carboxylase alpha	AY315626|ACACA|31|acetyl-CoA carboxylase alpha	NM_198834|ACACA|31|acetyl-CoA carboxylase alpha	NM_198839|ACACA|31|acetyl-CoA carboxylase alpha
hg18_v1_chr19_+_10515591_10515765	0.0682857	CCAGUGU	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr2_-_11523727_11523747	0.0668552	CCAGUGU	AK223407|E2F6|1876|E2F transcription factor 6	AY083996|E2F6|1876|E2F transcription factor 6	NM_198256|E2F6|1876|E2F transcription factor 6
hg18_v1_chr1_-_169977716_169978001	0.0662643	CCAGUGU	BC005974|VAMP4|8674|vesicle-associated membrane protein 4	AL035296|VAMP4|8674|vesicle-associated membrane protein 4	AK290441|VAMP4|8674|vesicle-associated membrane protein 4	AF044310|VAMP4|8674|vesicle-associated membrane protein 4	BC031264|VAMP4|8674|vesicle-associated membrane protein 4	BC007019|VAMP4|8674|vesicle-associated membrane protein 4	NM_001185127|VAMP4|8674|vesicle-associated membrane protein 4	NM_003762|VAMP4|8674|vesicle-associated membrane protein 4
hg18_v1_chr19_-_42874975_42875055	0.0658656	CCAGUGU	BC108687|ZNF781|163115|zinc finger protein 781	AK097019|ZNF781|163115|zinc finger protein 781	BC035681|ZNF781|163115|zinc finger protein 781	NM_152605|ZNF781|163115|zinc finger protein 781
hg18_v1_chr9_+_34980266_34980291	0.0657721	CCAGUGU	AK299647|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	NM_001135005|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5
hg18_v1_chr6_+_26491302_26491441	0.065599	CCAGUGU	NM_001197238|BTN2A2|10385|butyrophilin, subfamily 2, member A2	NM_001197239|BTN2A2|10385|butyrophilin, subfamily 2, member A2	NM_001197240|BTN2A2|10385|butyrophilin, subfamily 2, member A2	NM_006995|BTN2A2|10385|butyrophilin, subfamily 2, member A2	NM_181531|BTN2A2|10385|butyrophilin, subfamily 2, member A2	AK304744|BTN2A2|10385|butyrophilin, subfamily 2, member A2	AK289883|BTN2A2|10385|butyrophilin, subfamily 2, member A2	AK293526|BTN2A2|10385|butyrophilin, subfamily 2, member A2	AK298570|BTN2A2|10385|butyrophilin, subfamily 2, member A2	U90550|BTN2A2|10385|butyrophilin, subfamily 2, member A2	BC017497|BTN2A2|10385|butyrophilin, subfamily 2, member A2	NM_001197237|BTN2A2|10385|butyrophilin, subfamily 2, member A2	BC014021|BTN2A2|10385|butyrophilin, subfamily 2, member A2
hg18_v1_chr12_-_30740072_30740195	0.0650814	CCAGUGU	NM_006390|IPO8|10526|importin 8
hg18_v1_chr3_+_45611180_45611354	0.0649134	CCAGUGU	BC117236|LIMD1|8994|LIM domains containing 1	BC117238|LIMD1|8994|LIM domains containing 1	NM_014240|LIMD1|8994|LIM domains containing 1	AJ132408|LIMD1|8994|LIM domains containing 1
hg18_v1_chr11_-_67645433_67645496	0.0626836	CCAGUGU	NM_001277|CHKA|1119|choline kinase alpha	NM_212469|CHKA|1119|choline kinase alpha
hg18_v1_chr19_-_52426055_52426316	0.0626834	CCAGUGU	U82987|BBC3|27113|BCL2 binding component 3	BC136481|BBC3|27113|BCL2 binding component 3	AF332558|BBC3|27113|BCL2 binding component 3	NM_014417|BBC3|27113|BCL2 binding component 3
hg18_v1_chrX_+_129133234_129133826	0.0622901	CCAGUGU	BC001157|RAB33A|9363|RAB33A, member RAS oncogene family	BC001704|RAB33A|9363|RAB33A, member RAS oncogene family	BC009996|RAB33A|9363|RAB33A, member RAS oncogene family	NM_004794|RAB33A|9363|RAB33A, member RAS oncogene family	AF498959|RAB33A|9363|RAB33A, member RAS oncogene family	BT007038|RAB33A|9363|RAB33A, member RAS oncogene family	AK094927|RAB33A|9363|RAB33A, member RAS oncogene family
hg18_v1_chr7_+_107008439_107008453	0.0621622	CCAGUGU	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr16_-_30453646_30453736	0.0615795	CCAGUGU	AB209546|ZNF747|65988|zinc finger protein 747	AK054567|ZNF747|65988|zinc finger protein 747	BC001361|ZNF747|65988|zinc finger protein 747	NM_023931|ZNF747|65988|zinc finger protein 747
hg18_v1_chr1_+_40930233_40930276	0.0613921	CCAGUGU	NM_001142590|NFYC|4802|nuclear transcription factor Y, gamma	AK127677|NFYC|4802|nuclear transcription factor Y, gamma
hg18_v1_chr15_-_72922577_72922739	0.0611497	CCAGUGU	BC157884|ULK3|25989|unc-51-like kinase 3 (C. elegans)	NM_001099436|ULK3|25989|unc-51-like kinase 3 (C. elegans)	AL117482|ULK3|25989|unc-51-like kinase 3 (C. elegans)
hg18_v1_chr21_+_44109529_44109574	0.0602682	CCAGUGU	NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3
hg18_v1_chr5_-_179162480_179162480	0.0599493	CCAGUGU	AK023137|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B	NM_054013|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
hg18_v1_chr14_-_74249492_74249566	0.0580723	CCAGUGU	CR600611|KIAA0317|9870|KIAA0317	AB002315|KIAA0317|9870|KIAA0317	AK304217|KIAA0317|9870|KIAA0317	AK296912|KIAA0317|9870|KIAA0317	BX248747|KIAA0317|9870|KIAA0317	BC032944|KIAA0317|9870|KIAA0317	NM_001039479|KIAA0317|9870|KIAA0317
hg18_v1_chr17_+_33761234_33761544	0.058065	CCAGUGU	NM_014598|SOCS7|30837|suppressor of cytokine signaling 7	BC121030|SOCS7|30837|suppressor of cytokine signaling 7	BC121031|SOCS7|30837|suppressor of cytokine signaling 7	BC128607|SOCS7|30837|suppressor of cytokine signaling 7
hg18_v1_chr17_+_8154280_8154325	0.0579897	CCAGUGU	NM_173728|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK291626|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK023853|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	BC036749|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg18_v1_chr16_+_56230707_56230930	0.0579436	CCAGUGU	NM_001145774|GPR56|9289|G protein-coupled receptor 56	AK297236|GPR56|9289|G protein-coupled receptor 56	AK311156|GPR56|9289|G protein-coupled receptor 56	BC013207|GPR56|9289|G protein-coupled receptor 56
hg18_v1_chrX_-_15243647_15243666	0.0552551	CCAGUGU	AF425642|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC069340|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103874|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103875|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_080873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537857|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr1_+_24842180_24842260	0.0541974	CCAGUGU	AF419855|SRRM1|10250|serine/arginine repetitive matrix 1	NM_005839|SRRM1|10250|serine/arginine repetitive matrix 1
hg18_v1_chr17_+_38014883_38014883	0.0536119	CCAGUGU	NM_001070|TUBG1|7283|tubulin, gamma 1
hg18_v1_chrX_+_109132994_109132998	0.0523154	CCAGUGU	NM_032227|TMEM164|84187|transmembrane protein 164	AK026332|TMEM164|84187|transmembrane protein 164
hg18_v1_chr12_+_28301399_28301415	0.0517062	CCAGUGU	AY289196|CCDC91|55297|coiled-coil domain containing 91	NM_018318|CCDC91|55297|coiled-coil domain containing 91
hg18_v1_chr15_+_41597097_41597145	0.0514093	CCAGUGU	NM_002373|MAP1A|4130|microtubule-associated protein 1A	CR594234|MAP1A|4130|microtubule-associated protein 1A	AK291052|MAP1A|4130|microtubule-associated protein 1A	BC055312|MAP1A|4130|microtubule-associated protein 1A	BC094702|MAP1A|4130|microtubule-associated protein 1A	BC010470|MAP1A|4130|microtubule-associated protein 1A
hg18_v1_chr1_-_172228673_172228832	0.0511218	CCAGUGU	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr11_-_110088330_110088660	0.0498663	CCAGUGU	AK307602|ARHGAP20|57569|Rho GTPase activating protein 20	AY496263|ARHGAP20|57569|Rho GTPase activating protein 20	AY496264|ARHGAP20|57569|Rho GTPase activating protein 20	NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20
hg18_v1_chr21_+_44169706_44169706	0.0491036	CCAGUGU	AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3
hg18_v1_chr10_+_31648103_31648176	0.0486984	CCAGUGU	NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1	NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1	AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1	AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1	AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1	AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1	AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1	AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1	U12170|ZEB1|6935|zinc finger E-box binding homeobox 1	AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1	AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1	BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1	BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1	BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1	BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1	AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1
hg18_v1_chr2_-_241903925_241903936	0.0475213	CCAGUGU	NM_005336|HDLBP|3069|high density lipoprotein binding protein
hg18_v1_chr17_+_37864383_37864395	0.0473373	CCAGUGU	L78933|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	NM_001130020|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	NM_001130021|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	NM_005177|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	Z71460|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1
hg18_v1_chr14_-_91642703_91642759	0.0470826	CCAGUGU	AB050194|ATXN3|4287|ataxin 3	U64820|ATXN3|4287|ataxin 3	NM_001127696|ATXN3|4287|ataxin 3	NM_001127697|ATXN3|4287|ataxin 3	NM_001164774|ATXN3|4287|ataxin 3	NM_001164776|ATXN3|4287|ataxin 3	NM_001164777|ATXN3|4287|ataxin 3	NM_001164778|ATXN3|4287|ataxin 3	NM_001164779|ATXN3|4287|ataxin 3	NM_001164780|ATXN3|4287|ataxin 3	NM_001164781|ATXN3|4287|ataxin 3	NM_001164782|ATXN3|4287|ataxin 3	NM_004993|ATXN3|4287|ataxin 3	NM_030660|ATXN3|4287|ataxin 3
hg18_v1_chr11_-_61341011_61341104	0.0446522	CCAGUGU	CR591980|FADS1|3992|fatty acid desaturase 1	AK074754|FADS1|3992|fatty acid desaturase 1	AK074819|FADS1|3992|fatty acid desaturase 1	NM_013402|FADS1|3992|fatty acid desaturase 1
hg18_v1_chr8_-_102287083_102287178	0.0437505	CCAGUGU	NM_001042510|ZNF706|51123|zinc finger protein 706	NM_016096|ZNF706|51123|zinc finger protein 706
hg18_v1_chrX_+_109132507_109132546	0.0435186	CCAGUGU	AK094127|TMEM164|84187|transmembrane protein 164	NM_017698|TMEM164|84187|transmembrane protein 164
hg18_v1_chr1_+_200064904_200064922	0.0434865	CCAGUGU	NM_018085|IPO9|55705|importin 9
hg18_v1_chr8_-_102287044_102287060	0.0426717	CCAGUGU	NM_001042511|ZNF706|51123|zinc finger protein 706
hg18_v1_chr18_+_11841388_11841510	0.0422819	CCAGUGU	NM_020412|CHMP1B|57132|chromatin modifying protein 1B	AK314068|CHMP1B|57132|chromatin modifying protein 1B	CR609374|CHMP1B|57132|chromatin modifying protein 1B	BC065933|CHMP1B|57132|chromatin modifying protein 1B	CR595824|CHMP1B|57132|chromatin modifying protein 1B	CR600805|CHMP1B|57132|chromatin modifying protein 1B	CR616002|CHMP1B|57132|chromatin modifying protein 1B	CR618865|CHMP1B|57132|chromatin modifying protein 1B	CR609924|CHMP1B|57132|chromatin modifying protein 1B	CR595721|CHMP1B|57132|chromatin modifying protein 1B	BC012733|CHMP1B|57132|chromatin modifying protein 1B	AF281064|CHMP1B|57132|chromatin modifying protein 1B	CR626295|CHMP1B|57132|chromatin modifying protein 1B
hg18_v1_chr10_-_101935777_101935807	0.0418546	CCAGUGU	AF064093|ERLIN1|10613|ER lipid raft associated 1	NM_001100626|ERLIN1|10613|ER lipid raft associated 1
hg18_v1_chrX_+_70255128_70255331	0.0401109	CCAGUGU	AK302543|MED12|9968|mediator complex subunit 12	NM_005120|MED12|9968|mediator complex subunit 12	AF071309|MED12|9968|mediator complex subunit 12
hg18_v1_chr13_-_32658215_32658215	0.0392096	CCAGUGU	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chrX_+_128501862_128502097	0.03751	CCAGUGU	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg18_v1_chr1_-_94475840_94475894	0.0365471	CCAGUGU	BC067839|ARHGAP29|9411|Rho GTPase activating protein 29	NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29
hg18_v1_chr10_-_105604942_105605578	0.0347642	CCAGUGU	NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A
hg18_v1_chr1_-_148868713_148868721	0.0341963	CCAGUGU	NM_004436|ENSA|2029|endosulfine alpha	NM_207042|ENSA|2029|endosulfine alpha	NM_207043|ENSA|2029|endosulfine alpha	NM_207044|ENSA|2029|endosulfine alpha	NM_207168|ENSA|2029|endosulfine alpha
hg18_v1_chr12_-_107551783_107551800	0.0339588	CCAGUGU	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chr3_-_48445719_48446049	0.0331211	CCAGUGU	AB007867|PLXNB1|5364|plexin B1	BC146793|PLXNB1|5364|plexin B1	NM_002673|PLXNB1|5364|plexin B1
hg18_v1_chr1_+_222368413_222368660	0.0330419	CCAGUGU	NM_001136115|FBXO28|23219|F-box protein 28	NM_015176|FBXO28|23219|F-box protein 28	AK001628|FBXO28|23219|F-box protein 28	AK307892|FBXO28|23219|F-box protein 28	CR607611|FBXO28|23219|F-box protein 28	BC031576|FBXO28|23219|F-box protein 28	AK303381|FBXO28|23219|F-box protein 28	CR607640|FBXO28|23219|F-box protein 28	AB007952|FBXO28|23219|F-box protein 28
hg18_v1_chr16_+_31391998_31392026	0.032376	CCAGUGU	BC001507|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	BC001830|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	NM_015927|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1
hg18_v1_chr14_+_90650109_90650208	0.0323755	CCAGUGU	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr1_-_84744847_84744867	0.0321526	CCAGUGU	NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5
hg18_v1_chr8_-_13035102_13035193	0.031731	CCAGUGU	AK289734|DLC1|10395|deleted in liver cancer 1	DQ092382|DLC1|10395|deleted in liver cancer 1	AF026219|DLC1|10395|deleted in liver cancer 1	BC095415|DLC1|10395|deleted in liver cancer 1	NM_006094|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr7_-_95789204_95789472	0.0316111	CCAGUGU	DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)
hg18_v1_chr12_+_100795213_100795286	0.0315224	CCAGUGU	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr1_-_154147787_154147829	0.0313306	CCAGUGU	AK314239|RIT1|6016|Ras-like without CAAX 1	NM_006912|RIT1|6016|Ras-like without CAAX 1	AK298768|RIT1|6016|Ras-like without CAAX 1
hg18_v1_chr2_-_46996454_46996531	0.0310758	CCAGUGU	NM_001171506|MCFD2|90411|multiple coagulation factor deficiency 2	NM_001171509|MCFD2|90411|multiple coagulation factor deficiency 2	NM_139279|MCFD2|90411|multiple coagulation factor deficiency 2
hg18_v1_chr17_+_7393098_7393177	0.0299782	CCAGUGU	BC019047|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12	NM_003809|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12	NM_172089|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough	BC071837|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12	AF055872|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12	AY358870|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12	AY081051|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough	BC104420|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12	AF030099|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12
hg18_v1_chr10_-_61570665_61570779	0.029701	CCAGUGU	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr9_-_139214962_139215070	0.0293998	CCAGUGU	NM_001128228|TPRN|286262|taperin
hg18_v1_chr12_+_103204842_103205046	0.0288433	CCAGUGU	NM_003330|TXNRD1|7296|thioredoxin reductase 1	NM_182729|TXNRD1|7296|thioredoxin reductase 1	NM_182742|TXNRD1|7296|thioredoxin reductase 1	NM_182743|TXNRD1|7296|thioredoxin reductase 1	AK226071|TXNRD1|7296|thioredoxin reductase 1	AY344087|TXNRD1|7296|thioredoxin reductase 1	AK308881|TXNRD1|7296|thioredoxin reductase 1	AY344074|TXNRD1|7296|thioredoxin reductase 1	AY344081|TXNRD1|7296|thioredoxin reductase 1	AK293322|TXNRD1|7296|thioredoxin reductase 1	AK312262|TXNRD1|7296|thioredoxin reductase 1	AK296495|TXNRD1|7296|thioredoxin reductase 1	AY344089|TXNRD1|7296|thioredoxin reductase 1	AY344092|TXNRD1|7296|thioredoxin reductase 1	AY344084|TXNRD1|7296|thioredoxin reductase 1	AY344086|TXNRD1|7296|thioredoxin reductase 1	AY344673|TXNRD1|7296|thioredoxin reductase 1	S79851|TXNRD1|7296|thioredoxin reductase 1	X91247|TXNRD1|7296|thioredoxin reductase 1	BC018122|TXNRD1|7296|thioredoxin reductase 1	AY344093|TXNRD1|7296|thioredoxin reductase 1	AY344675|TXNRD1|7296|thioredoxin reductase 1
hg18_v1_chrX_-_15242589_15242601	0.028083	CCAGUGU	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr19_+_62690890_62691144	0.0272479	CCAGUGU	NM_001098491|ZNF419|79744|zinc finger protein 419	NM_001098492|ZNF419|79744|zinc finger protein 419	NM_001098493|ZNF419|79744|zinc finger protein 419	NM_001098494|ZNF419|79744|zinc finger protein 419	NM_001098495|ZNF419|79744|zinc finger protein 419	NM_001098496|ZNF419|79744|zinc finger protein 419	NM_024691|ZNF419|79744|zinc finger protein 419	AK316297|ZNF419|79744|zinc finger protein 419	AK309427|ZNF419|79744|zinc finger protein 419	AK307802|ZNF419|79744|zinc finger protein 419	AK026886|ZNF419|79744|zinc finger protein 419	AK302135|ZNF419|79744|zinc finger protein 419	AK316156|ZNF419|79744|zinc finger protein 419	AK304569|ZNF419|79744|zinc finger protein 419	BC008297|ZNF419|79744|zinc finger protein 419	BC024259|ZNF419|79744|zinc finger protein 419	AB209371|ZNF419|79744|zinc finger protein 419
hg18_v1_chr8_+_59628281_59628332	0.0269966	CCAGUGU	NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)	NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)	NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)	NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)	NM_005625|SDCBP|6386|syndecan binding protein (syntenin)	AF000652|SDCBP|6386|syndecan binding protein (syntenin)	CR593446|SDCBP|6386|syndecan binding protein (syntenin)
hg18_v1_chr8_-_93177057_93177057	0.0257558	CCAGUGU	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr11_-_86343859_86344214	0.0257249	CCAGUGU	BC025750|FZD4|8322|frizzled homolog 4 (Drosophila)	AB054881|FZD4|8322|frizzled homolog 4 (Drosophila)	BC114527|FZD4|8322|frizzled homolog 4 (Drosophila)	BC114622|FZD4|8322|frizzled homolog 4 (Drosophila)	AB032417|FZD4|8322|frizzled homolog 4 (Drosophila)	NM_012193|FZD4|8322|frizzled homolog 4 (Drosophila)	AK292768|FZD4|8322|frizzled homolog 4 (Drosophila)
hg18_v1_chr17_-_38150551_38150658	0.0256857	CCAGUGU	BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)
hg18_v1_chr15_-_73658563_73658679	0.0243862	CCAGUGU	M83738|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9	NM_002833|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9
hg18_v1_chr20_-_43919360_43919473	0.024195	CCAGUGU	AF124264|ACOT8|10005|acyl-CoA thioesterase 8	CR541771|ACOT8|10005|acyl-CoA thioesterase 8	CR541778|ACOT8|10005|acyl-CoA thioesterase 8	BC117155|ACOT8|10005|acyl-CoA thioesterase 8	BC117157|ACOT8|10005|acyl-CoA thioesterase 8	AF014404|ACOT8|10005|acyl-CoA thioesterase 8	AK056668|ACOT8|10005|acyl-CoA thioesterase 8	AK298783|ACOT8|10005|acyl-CoA thioesterase 8	AK292494|ACOT8|10005|acyl-CoA thioesterase 8	X86032|ACOT8|10005|acyl-CoA thioesterase 8	AK296973|ACOT8|10005|acyl-CoA thioesterase 8	NM_005469|ACOT8|10005|acyl-CoA thioesterase 8
hg18_v1_chr8_+_42247954_42247977	0.0237352	CCAGUGU	NM_001190722|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
hg18_v1_chr10_-_101482412_101482412	0.0234355	CCAGUGU	BX537557|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	NM_004376|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	NM_078470|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)
hg18_v1_chr22_-_41340886_41340905	0.0218004	CCAGUGU	BC095411|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3	NM_032311|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3	NM_178136|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3
hg18_v1_chrX_-_131375217_131375316	0.0214693	CCAGUGU	AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr9_-_36390817_36390977	0.0213763	CCAGUGU	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg18_v1_chr3_+_44641505_44641590	0.0211319	CCAGUGU	AY279353|ZNF197|10168|zinc finger protein 197	NM_001024855|ZNF197|10168|zinc finger protein 197	NM_006991|ZNF197|10168|zinc finger protein 197	AK314196|ZNF197|10168|zinc finger protein 197	AY074878|ZNF197|10168|zinc finger protein 197	BC031209|ZNF197|10168|zinc finger protein 197
hg18_v1_chr12_+_63084317_63084710	0.0208939	CCAGUGU	NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr11_+_66643311_66643319	0.020776	CCAGUGU	BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A	NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A
hg18_v1_chr2_+_177965617_177965733	0.0204527	CCAGUGU	AK309714|AGPS|8540|alkylglycerone phosphate synthase	NM_003659|AGPS|8540|alkylglycerone phosphate synthase	CR591757|AGPS|8540|alkylglycerone phosphate synthase
hg18_v1_chr3_-_48446405_48446597	0.0183431	CCAGUGU	BC066773|PLXNB1|5364|plexin B1	NM_001130082|PLXNB1|5364|plexin B1	AK296776|PLXNB1|5364|plexin B1
hg18_v1_chr4_+_170778265_170778301	0.0181454	CCAGUGU	BX647119|CLCN3|1182|chloride channel 3	NM_001829|CLCN3|1182|chloride channel 3	NM_173872|CLCN3|1182|chloride channel 3
hg18_v1_chr1_-_154093561_154093640	0.0177691	CCAGUGU	AB232668|GON4L|54856|gon-4-like (C. elegans)	AY335492|GON4L|54856|gon-4-like (C. elegans)	BC114629|GON4L|54856|gon-4-like (C. elegans)	BC115703|GON4L|54856|gon-4-like (C. elegans)	BX537764|GON4L|54856|gon-4-like (C. elegans)	NM_001037533|GON4L|54856|gon-4-like (C. elegans)	NM_032292|GON4L|54856|gon-4-like (C. elegans)	AY335490|GON4L|54856|gon-4-like (C. elegans)	BX648043|GON4L|54856|gon-4-like (C. elegans)	AK098734|GON4L|54856|gon-4-like (C. elegans)	BX648802|GON4L|54856|gon-4-like (C. elegans)
hg18_v1_chr15_+_62175229_62175251	0.0162531	CCAGUGU	NM_003099|SNX1|6642|sorting nexin 1	NM_148955|SNX1|6642|sorting nexin 1	NM_152826|SNX1|6642|sorting nexin 1	AB209013|SNX1|6642|sorting nexin 1	AK128179|SNX1|6642|sorting nexin 1	AK222561|SNX1|6642|sorting nexin 1	AK291752|SNX1|6642|sorting nexin 1
hg18_v1_chr22_+_15945844_15945858	0.0160575	CCAGUGU	CR594472|IL17RA|23765|interleukin 17 receptor A	NM_014339|IL17RA|23765|interleukin 17 receptor A
hg18_v1_chr11_-_77577288_77577321	0.0159997	CCAGUGU	AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21	BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21	NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21	AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21
hg18_v1_chr7_+_101860958_101861006	0.015935	CCAGUGU	NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2	NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2
hg18_v1_chr17_-_53420595_53420639	0.0158528	CCAGUGU	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr5_-_107034484_107034494	0.0155716	CCAGUGU	AK308672|EFNA5|1946|ephrin-A5	NM_001962|EFNA5|1946|ephrin-A5	U26403|EFNA5|1946|ephrin-A5
hg18_v1_chr3_-_198960964_198960964	0.0153358	CCAGUGU	NM_001145642|KIAA0226|9711|KIAA0226
hg18_v1_chr1_+_40929828_40929890	0.0139142	CCAGUGU	NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma	NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma	NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma	NM_014223|NFYC|4802|nuclear transcription factor Y, gamma
hg18_v1_chr12_+_52060191_52060324	0.0136787	CCAGUGU	BC062539|SP1|6667|Sp1 transcription factor	NM_138473|SP1|6667|Sp1 transcription factor	AF255682|SP1|6667|Sp1 transcription factor	AJ272134|SP1|6667|Sp1 transcription factor
hg18_v1_chr8_-_33450172_33450205	0.0135685	CCAGUGU	AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)	NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
hg18_v1_chr10_-_43223226_43223304	0.0129208	CCAGUGU	BC016736|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	NM_001098206|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chr1_-_148868178_148868234	0.0128737	CCAGUGU	AK290064|ENSA|2029|endosulfine alpha	NM_207045|ENSA|2029|endosulfine alpha	NM_207046|ENSA|2029|endosulfine alpha	NM_207047|ENSA|2029|endosulfine alpha
hg18_v1_chr19_-_63353956_63353965	0.0128317	CCAGUGU	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg18_v1_chr17_-_53439655_53439705	0.0120686	CCAGUGU	NM_001078166|SRSF1|6426|serine/arginine-rich splicing factor 1	NM_006924|SRSF1|6426|serine/arginine-rich splicing factor 1
hg18_v1_chr2_-_25048276_25048466	0.0117877	CCAGUGU	AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27
hg18_v1_chr10_-_89613173_89613173	0.0116551	CCAGUGU	EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor	NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor
hg18_v1_chr7_+_107007657_107007657	0.0113266	CCAGUGU	NM_018844|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr2_+_108702338_108702402	0.0106497	CCAGUGU	D42063|RANBP2|5903|RAN binding protein 2	NM_006267|RANBP2|5903|RAN binding protein 2
hg18_v1_chr2_+_190981257_190981360	0.0105557	CCAGUGU	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr6_-_36412562_36412644	0.0102409	CCAGUGU	BC140873|C6orf222|389384|chromosome 6 open reading frame 222	BX648558|C6orf222|389384|chromosome 6 open reading frame 222	NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222
hg18_v1_chr8_-_96030719_96030948	0.0101001	CCAGUGU	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg18_v1_chr16_+_4322225_4322280	0.00999243	CCAGUGU	AF325914|GLIS2|84662|GLIS family zinc finger 2	NM_032575|GLIS2|84662|GLIS family zinc finger 2
hg18_v1_chr14_-_54948290_54948328	0.00997057	CCAGUGU	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)
hg18_v1_chr9_-_93225961_93226045	0.00981193	CCAGUGU	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated
hg18_v1_chr8_+_42248008_42248137	0.00973443	CCAGUGU	BC090865|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	AF080158|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	AK298241|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	NM_001190721|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	AB209090|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	BC108694|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	AK290952|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	BC144080|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	BX648165|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
hg18_v1_chr18_-_16945763_16945809	0.00931128	CCAGUGU	AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1	NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1
hg18_v1_chr19_+_7505037_7505127	0.00851267	CCAGUGU	NM_006702|PNPLA6|10908|patatin-like phospholipase domain containing 6	BC050553|PNPLA6|10908|patatin-like phospholipase domain containing 6	AK302462|PNPLA6|10908|patatin-like phospholipase domain containing 6	NM_001166112|PNPLA6|10908|patatin-like phospholipase domain containing 6
hg18_v1_chr9_-_139473606_139473641	0.00845533	CCAGUGU	AY255128|NELF|26012|nasal embryonic LHRH factor	AY255129|NELF|26012|nasal embryonic LHRH factor	AY255130|NELF|26012|nasal embryonic LHRH factor	AY255131|NELF|26012|nasal embryonic LHRH factor	AY255132|NELF|26012|nasal embryonic LHRH factor	NM_001130969|NELF|26012|nasal embryonic LHRH factor	NM_001130970|NELF|26012|nasal embryonic LHRH factor	NM_001130971|NELF|26012|nasal embryonic LHRH factor	NM_001178064|NELF|26012|nasal embryonic LHRH factor	NM_015537|NELF|26012|nasal embryonic LHRH factor
hg18_v1_chr16_+_69115189_69115214	0.00805509	CCAGUGU	NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa	AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa
hg18_v1_chr1_-_89303478_89303630	0.00798768	CCAGUGU	AK291783|GBP1|2633|guanylate binding protein 1, interferon-inducible, 67kDa	M55542|GBP1|2633|guanylate binding protein 1, interferon-inducible, 67kDa	AK298032|GBP1|2633|guanylate binding protein 1, interferon-inducible, 67kDa	AK303893|GBP1|2633|guanylate binding protein 1, interferon-inducible, 67kDa	AB208912|GBP1|2633|guanylate binding protein 1, interferon-inducible, 67kDa	BC002666|GBP1|2633|guanylate binding protein 1, interferon-inducible, 67kDa	NM_002053|GBP1|2633|guanylate binding protein 1, interferon-inducible, 67kDa
hg18_v1_chr2_-_70382633_70382774	0.00755734	CCAGUGU	CR614789|FAM136A|84908|family with sequence similarity 136, member A	CR626290|FAM136A|84908|family with sequence similarity 136, member A	AM393139|FAM136A|84908|family with sequence similarity 136, member A	CR621809|FAM136A|84908|family with sequence similarity 136, member A	CR603527|FAM136A|84908|family with sequence similarity 136, member A	AK225148|FAM136A|84908|family with sequence similarity 136, member A	BC026293|FAM136A|84908|family with sequence similarity 136, member A	AL833147|FAM136A|84908|family with sequence similarity 136, member A	CR599147|FAM136A|84908|family with sequence similarity 136, member A	BC014975|FAM136A|84908|family with sequence similarity 136, member A	CR596266|FAM136A|84908|family with sequence similarity 136, member A	CR623290|FAM136A|84908|family with sequence similarity 136, member A	AK225151|FAM136A|84908|family with sequence similarity 136, member A	AK309543|FAM136A|84908|family with sequence similarity 136, member A	AK315877|FAM136A|84908|family with sequence similarity 136, member A	CR595145|FAM136A|84908|family with sequence similarity 136, member A	AK027574|FAM136A|84908|family with sequence similarity 136, member A	CR612968|FAM136A|84908|family with sequence similarity 136, member A	NM_032822|FAM136A|84908|family with sequence similarity 136, member A
hg18_v1_chr20_-_4930133_4930188	0.00698264	CCAGUGU	D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2
hg18_v1_chr6_-_79844658_79844894	0.00633023	CCAGUGU	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr19_-_13925192_13925203	0.00600313	CCAGUGU	AK027100|PODNL1|79883|podocan-like 1	AK298489|PODNL1|79883|podocan-like 1	NM_001146254|PODNL1|79883|podocan-like 1	NM_001146255|PODNL1|79883|podocan-like 1
hg18_v1_chr1_-_203985963_203985994	0.00595767	CCAGUGU	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr5_+_140996700_140996742	0.00516648	CCAGUGU	AK054889|RELL2|285613|RELT-like 2	NM_001130029|RELL2|285613|RELT-like 2	NM_173828|RELL2|285613|RELT-like 2
hg18_v1_chr12_-_14847634_14847671	0.00475147	CCAGUGU	CR607984|WBP11|51729|WW domain binding protein 11	AB029309|WBP11|51729|WW domain binding protein 11	BC023532|WBP11|51729|WW domain binding protein 11	BC001621|WBP11|51729|WW domain binding protein 11	NM_016312|WBP11|51729|WW domain binding protein 11
hg18_v1_chr5_+_78567604_78567690	0.00415104	CCAGUGU	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg18_v1_chr12_-_30721410_30721444	0.00412239	CCAGUGU	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr1_-_78217360_78217366	0.00360454	CCAGUGU	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr13_+_95127393_95127398	0.00352788	CCAGUGU	AK292947|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3	NM_006260|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3
hg18_v1_chr1_+_160002693_160002731	0.00330696	CCAGUGU	AB015856|ATF6|22926|activating transcription factor 6	NM_007348|ATF6|22926|activating transcription factor 6
hg18_v1_chr12_-_52179462_52179761	0.0030456	CCAGUGU	AK094195|MAP3K12|7786|mitogen-activated protein kinase kinase kinase 12	U07358|MAP3K12|7786|mitogen-activated protein kinase kinase kinase 12	BC050050|MAP3K12|7786|mitogen-activated protein kinase kinase kinase 12	NM_001193511|MAP3K12|7786|mitogen-activated protein kinase kinase kinase 12	NM_006301|MAP3K12|7786|mitogen-activated protein kinase kinase kinase 12
hg18_v1_chr19_-_16544188_16544205	0.00294011	CCAGUGU	BC062562|SLC35E1|79939|solute carrier family 35, member E1	NM_024881|SLC35E1|79939|solute carrier family 35, member E1
hg18_v1_chr7_+_77307382_77307508	0.00243412	CCAGUGU	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg18_v1_chrX_-_119578747_119578844	0.000922077	CCAGUGU	BX537787|CUL4B|8450|cullin 4B	BX647096|CUL4B|8450|cullin 4B	CR936722|CUL4B|8450|cullin 4B	NM_001079872|CUL4B|8450|cullin 4B
hg18_v1_chr12_-_25295091_25295326	0.000916164	CCAGUGU	AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
hg18_v1_chr1_+_144595224_144595224	0.000613479	CCAGUGU	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C
hg18_v1_chr1_-_23999744_23999915	0.000320299	CCAGUGU	BC056880|GALE|2582|UDP-galactose-4-epimerase	BC001273|GALE|2582|UDP-galactose-4-epimerase	BC050685|GALE|2582|UDP-galactose-4-epimerase	CR592211|GALE|2582|UDP-galactose-4-epimerase	CR596991|GALE|2582|UDP-galactose-4-epimerase	AK096127|GALE|2582|UDP-galactose-4-epimerase	CR601378|GALE|2582|UDP-galactose-4-epimerase	AK307354|GALE|2582|UDP-galactose-4-epimerase	CR611350|GALE|2582|UDP-galactose-4-epimerase	AK057302|GALE|2582|UDP-galactose-4-epimerase	CR592671|GALE|2582|UDP-galactose-4-epimerase	CR616589|GALE|2582|UDP-galactose-4-epimerase	NM_001008216|GALE|2582|UDP-galactose-4-epimerase
hg18_v1_chr19_+_50041232_50041333	6.41396e-05	CCAGUGU	NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)
hg18_v1_chr4_+_24923490_24923601	1.52371e-05	CCAGUGU	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4
