hg18_v1_chr18_+_13208777_13208794	1.21081	UGCAUUG	NM_181481|C18orf1|753|chromosome 18 open reading frame 1	NM_181482|C18orf1|753|chromosome 18 open reading frame 1	BC030199|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr22_-_27405708_27405879	1.14582	UGCAUUG	NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28
hg18_v1_chr5_-_59225377_59225377	1.07515	UGCAUUG	NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr1_-_29321599_29321599	1.03893	UGCAUUG	BC110336|TMEM200B|399474|transmembrane protein 200B	NM_001171868|TMEM200B|399474|transmembrane protein 200B
hg18_v1_chr1_-_119333701_119333701	0.991056	UGCAUUG	AK127536|TBX15|6913|T-box 15	NM_152380|TBX15|6913|T-box 15
hg18_v1_chr7_+_154943466_154943584	0.87347	UGCAUUG	BC104970|EN2|2020|engrailed homeobox 2	BC104972|EN2|2020|engrailed homeobox 2	NM_001427|EN2|2020|engrailed homeobox 2
hg18_v1_chr18_+_53253775_53253952	0.858506	UGCAUUG	NM_004852|ONECUT2|9480|one cut homeobox 2	Y18198|ONECUT2|9480|one cut homeobox 2	BC108925|ONECUT2|9480|one cut homeobox 2	BC108926|ONECUT2|9480|one cut homeobox 2
hg18_v1_chr1_-_29322993_29323007	0.834218	UGCAUUG	BC064375|TMEM200B|399474|transmembrane protein 200B	BC082989|TMEM200B|399474|transmembrane protein 200B	NM_001003682|TMEM200B|399474|transmembrane protein 200B
hg18_v1_chr12_+_2032649_2032861	0.820972	UGCAUUG	NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit
hg18_v1_chr7_+_94377145_94377145	0.808644	UGCAUUG	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A
hg18_v1_chr20_+_44091219_44091241	0.765551	UGCAUUG	NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5	AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5
hg18_v1_chr12_+_52665196_52665310	0.764721	UGCAUUG	AK313759|HOXC10|3226|homeobox C10	NM_017409|HOXC10|3226|homeobox C10	BC001293|HOXC10|3226|homeobox C10	CR622939|HOXC10|3226|homeobox C10	AF255675|HOXC10|3226|homeobox C10	BT009921|HOXC10|3226|homeobox C10
hg18_v1_chr9_-_106730256_106730346	0.761699	UGCAUUG	AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1
hg18_v1_chr18_+_13601664_13601664	0.738115	UGCAUUG	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr3_-_193609531_193609544	0.709814	UGCAUUG	AK125307|FGF12|2257|fibroblast growth factor 12	NM_021032|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr11_-_44288188_44288316	0.575801	UGCAUUG	AB058691|ALX4|60529|ALX homeobox 4	AJ404888|ALX4|60529|ALX homeobox 4	AF294629|ALX4|60529|ALX homeobox 4	NM_021926|ALX4|60529|ALX homeobox 4	AK092346|ALX4|60529|ALX homeobox 4
hg18_v1_chr7_-_19123787_19123819	0.575762	UGCAUUG	BC036704|TWIST1|7291|twist homolog 1 (Drosophila)	NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)
hg18_v1_chr8_+_104582151_104582151	0.538359	UGCAUUG	AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2	NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr14_+_91859904_91859954	0.523574	UGCAUUG	NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg18_v1_chr1_-_215377718_215377719	0.520562	UGCAUUG	CR749497|ESRRG|2104|estrogen-related receptor gamma	BX647076|ESRRG|2104|estrogen-related receptor gamma	NM_001134285|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr21_-_38955487_38955573	0.517302	UGCAUUG	AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr12_+_50271283_50271286	0.512003	UGCAUUG	AB027567|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	NM_014191|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg18_v1_chr15_+_83160914_83160914	0.494884	UGCAUUG	AY044449|ALPK3|57538|alpha-kinase 3	NM_020778|ALPK3|57538|alpha-kinase 3
hg18_v1_chr21_+_32167175_32168008	0.491807	UGCAUUG	AJ271722|HUNK|30811|hormonally up-regulated Neu-associated kinase	NM_014586|HUNK|30811|hormonally up-regulated Neu-associated kinase
hg18_v1_chr7_-_126679540_126679663	0.490588	UGCAUUG	AK315203|GRM8|2918|glutamate receptor, metabotropic 8	NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8
hg18_v1_chr7_+_28418668_28418668	0.478606	UGCAUUG	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr7_+_105390892_105390977	0.469074	UGCAUUG	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg18_v1_chr4_-_138673078_138673107	0.467767	UGCAUUG	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg18_v1_chr4_+_82171142_82171191	0.448475	UGCAUUG	M22491|BMP3|651|bone morphogenetic protein 3	NM_001201|BMP3|651|bone morphogenetic protein 3	BC096269|BMP3|651|bone morphogenetic protein 3	BC096270|BMP3|651|bone morphogenetic protein 3	BC096271|BMP3|651|bone morphogenetic protein 3	BC117514|BMP3|651|bone morphogenetic protein 3
hg18_v1_chr6_+_101953581_101953671	0.4385	UGCAUUG	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2
hg18_v1_chr16_-_49742008_49742008	0.437118	UGCAUUG	AK307835|SALL1|6299|sal-like 1 (Drosophila)	NM_001127892|SALL1|6299|sal-like 1 (Drosophila)
hg18_v1_chr1_+_66772393_66772552	0.433366	UGCAUUG	AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1
hg18_v1_chr6_+_69401660_69402585	0.433331	UGCAUUG	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3	AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3	AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3
hg18_v1_chr5_-_58370693_58371578	0.433052	UGCAUUG	U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr15_-_53822468_53822569	0.422412	UGCAUUG	AY630258|PRTG|283659|protogenin	NM_173814|PRTG|283659|protogenin
hg18_v1_chr14_+_54291255_54291300	0.422203	UGCAUUG	NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A	BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A
hg18_v1_chr8_+_77756061_77756069	0.42117	UGCAUUG	AK131408|ZFHX4|79776|zinc finger homeobox 4	NM_024721|ZFHX4|79776|zinc finger homeobox 4
hg18_v1_chr15_-_75711743_75711765	0.409407	UGCAUUG	AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1	AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1	BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1	NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1
hg18_v1_chr5_-_58688428_58688572	0.408321	UGCAUUG	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr5_-_158459276_158459365	0.401866	UGCAUUG	BC041178|EBF1|1879|early B-cell factor 1	AK289712|EBF1|1879|early B-cell factor 1	BC038805|EBF1|1879|early B-cell factor 1	NM_024007|EBF1|1879|early B-cell factor 1
hg18_v1_chr15_-_62854749_62854850	0.386326	UGCAUUG	BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2	BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2	AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2	NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2	AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2
hg18_v1_chr8_+_118019618_118019663	0.38003	UGCAUUG	BC140924|C8orf85|441376|chromosome 8 open reading frame 85	BC142621|C8orf85|441376|chromosome 8 open reading frame 85	NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85	AB181519|C8orf85|441376|chromosome 8 open reading frame 85
hg18_v1_chrX_-_23955223_23955223	0.376081	UGCAUUG	AK057298|KLHL15|80311|kelch-like 15 (Drosophila)	NM_030624|KLHL15|80311|kelch-like 15 (Drosophila)
hg18_v1_chr13_-_71339313_71339558	0.37076	UGCAUUG	AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)	AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)	NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)	NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)	NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)
hg18_v1_chr9_-_103540682_103540763	0.369598	UGCAUUG	AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
hg18_v1_chr7_+_28441758_28441758	0.368512	UGCAUUG	L05911|CREB5|9586|cAMP responsive element binding protein 5	NM_004904|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr16_-_49742651_49743175	0.365378	UGCAUUG	BC113881|SALL1|6299|sal-like 1 (Drosophila)	BC113906|SALL1|6299|sal-like 1 (Drosophila)	BC131548|SALL1|6299|sal-like 1 (Drosophila)	Y18265|SALL1|6299|sal-like 1 (Drosophila)	AK295103|SALL1|6299|sal-like 1 (Drosophila)	NM_002968|SALL1|6299|sal-like 1 (Drosophila)
hg18_v1_chr1_-_214963279_214963429	0.359349	UGCAUUG	AF117255|ESRRG|2104|estrogen-related receptor gamma	BC008218|ESRRG|2104|estrogen-related receptor gamma	AY388456|ESRRG|2104|estrogen-related receptor gamma	AK291647|ESRRG|2104|estrogen-related receptor gamma	AB020639|ESRRG|2104|estrogen-related receptor gamma	AK290945|ESRRG|2104|estrogen-related receptor gamma	BC064700|ESRRG|2104|estrogen-related receptor gamma	NM_001438|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr5_-_58918031_58918081	0.358979	UGCAUUG	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr8_+_102573837_102573845	0.354858	UGCAUUG	NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)	AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)
hg18_v1_chr18_+_13610866_13610866	0.345645	UGCAUUG	AF009426|C18orf1|753|chromosome 18 open reading frame 1	AF009427|C18orf1|753|chromosome 18 open reading frame 1	NM_004338|C18orf1|753|chromosome 18 open reading frame 1	NM_181483|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr3_-_193928038_193928081	0.342833	UGCAUUG	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr12_+_50342814_50342868	0.333689	UGCAUUG	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg18_v1_chr5_+_60663842_60663869	0.324327	UGCAUUG	NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6
hg18_v1_chr17_+_73511843_73511912	0.323268	UGCAUUG	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg18_v1_chr1_-_94475840_94475894	0.313547	UGCAUUG	BC067839|ARHGAP29|9411|Rho GTPase activating protein 29	NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29
hg18_v1_chr14_+_54104383_54104389	0.307316	UGCAUUG	AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A	BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A	BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A	NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A	NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A
hg18_v1_chr3_-_117647053_117647074	0.303532	UGCAUUG	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr16_-_695719_695914	0.303293	UGCAUUG	BC036680|FBXL16|146330|F-box and leucine-rich repeat protein 16	NM_153350|FBXL16|146330|F-box and leucine-rich repeat protein 16
hg18_v1_chr5_-_37875538_37875538	0.301429	UGCAUUG	AF053748|GDNF|2668|glial cell derived neurotrophic factor	NM_000514|GDNF|2668|glial cell derived neurotrophic factor
hg18_v1_chr3_-_8786263_8786306	0.300453	UGCAUUG	NM_000916|OXTR|5021|oxytocin receptor
hg18_v1_chr18_-_55515623_55515638	0.298649	UGCAUUG	NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1
hg18_v1_chrX_+_147389825_147389935	0.29781	UGCAUUG	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2	NM_001169123|AFF2|2334|AF4/FMR2 family, member 2	NM_001169124|AFF2|2334|AF4/FMR2 family, member 2	NM_001169125|AFF2|2334|AF4/FMR2 family, member 2	NM_002025|AFF2|2334|AF4/FMR2 family, member 2	U48436|AFF2|2334|AF4/FMR2 family, member 2	L76569|AFF2|2334|AF4/FMR2 family, member 2
hg18_v1_chr11_-_88420687_88420887	0.291165	UGCAUUG	AY608336|GRM5|2915|glutamate receptor, metabotropic 5	D28538|GRM5|2915|glutamate receptor, metabotropic 5	D28539|GRM5|2915|glutamate receptor, metabotropic 5	NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5
hg18_v1_chrX_+_147608302_147608306	0.290588	UGCAUUG	AK301927|AFF2|2334|AF4/FMR2 family, member 2	NM_001170628|AFF2|2334|AF4/FMR2 family, member 2
hg18_v1_chr14_+_91859289_91859289	0.285722	UGCAUUG	AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg18_v1_chr12_+_26017954_26017954	0.279617	UGCAUUG	AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr15_-_58671929_58672036	0.278212	UGCAUUG	L14611|RORA|6095|RAR-related orphan receptor A	BC100987|RORA|6095|RAR-related orphan receptor A	BC100988|RORA|6095|RAR-related orphan receptor A	BC100989|RORA|6095|RAR-related orphan receptor A	BC100990|RORA|6095|RAR-related orphan receptor A	CR591459|RORA|6095|RAR-related orphan receptor A	NM_134262|RORA|6095|RAR-related orphan receptor A	CR611772|RORA|6095|RAR-related orphan receptor A
hg18_v1_chrX_+_46967360_46967360	0.277467	UGCAUUG	AK301832|CDK16|5127|cyclin-dependent kinase 16	NM_001170460|CDK16|5127|cyclin-dependent kinase 16
hg18_v1_chr4_-_45820686_45820854	0.272864	UGCAUUG	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1
hg18_v1_chr5_-_59100194_59100231	0.272677	UGCAUUG	NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr4_+_41057507_41057592	0.272288	UGCAUUG	CR933645|LIMCH1|22998|LIM and calponin homology domains 1	CR936664|LIMCH1|22998|LIM and calponin homology domains 1	AB029025|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112717|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112718|LIMCH1|22998|LIM and calponin homology domains 1	NM_014988|LIMCH1|22998|LIM and calponin homology domains 1	CR936658|LIMCH1|22998|LIM and calponin homology domains 1	CR936601|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr7_+_43118721_43118782	0.271228	UGCAUUG	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg18_v1_chr17_+_8865547_8865838	0.27047	UGCAUUG	NM_004822|NTN1|9423|netrin 1	U75586|NTN1|9423|netrin 1
hg18_v1_chr12_-_103055924_103056169	0.268474	UGCAUUG	CR616440|NFYB|4801|nuclear transcription factor Y, beta	X59710|NFYB|4801|nuclear transcription factor Y, beta	BC007035|NFYB|4801|nuclear transcription factor Y, beta	AK291934|NFYB|4801|nuclear transcription factor Y, beta	BC005316|NFYB|4801|nuclear transcription factor Y, beta	BC005317|NFYB|4801|nuclear transcription factor Y, beta	AK311706|NFYB|4801|nuclear transcription factor Y, beta	NM_006166|NFYB|4801|nuclear transcription factor Y, beta
hg18_v1_chr5_-_37871685_37871685	0.265171	UGCAUUG	AJ001897|GDNF|2668|glial cell derived neurotrophic factor	AJ001898|GDNF|2668|glial cell derived neurotrophic factor	NM_001190468|GDNF|2668|glial cell derived neurotrophic factor	NM_001190469|GDNF|2668|glial cell derived neurotrophic factor
hg18_v1_chr1_+_179719338_179719338	0.264494	UGCAUUG	L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg18_v1_chr15_+_77511912_77511916	0.256226	UGCAUUG	AB028947|KIAA1024|23251|KIAA1024	NM_015206|KIAA1024|23251|KIAA1024	BC152466|KIAA1024|23251|KIAA1024
hg18_v1_chr4_+_41309668_41309684	0.254508	UGCAUUG	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr5_-_58607673_58607701	0.252677	UGCAUUG	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr15_+_89444185_89444242	0.250525	UGCAUUG	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr11_-_88436463_88436463	0.24976	UGCAUUG	AK291362|GRM5|2915|glutamate receptor, metabotropic 5	NM_000842|GRM5|2915|glutamate receptor, metabotropic 5
hg18_v1_chr16_+_25610847_25610847	0.24355	UGCAUUG	AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4	NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4
hg18_v1_chr12_-_47735373_47735373	0.241091	UGCAUUG	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2
hg18_v1_chr10_+_101078784_101078845	0.238256	UGCAUUG	NM_020348|CNNM1|26507|cyclin M1
hg18_v1_chr7_-_105106844_105106844	0.234047	UGCAUUG	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr18_-_46062051_46062170	0.231546	UGCAUUG	AK225889|MBD1|4152|methyl-CpG binding domain protein 1	AK300759|MBD1|4152|methyl-CpG binding domain protein 1	AK291519|MBD1|4152|methyl-CpG binding domain protein 1	NM_002384|MBD1|4152|methyl-CpG binding domain protein 1	NM_015844|MBD1|4152|methyl-CpG binding domain protein 1	NM_015845|MBD1|4152|methyl-CpG binding domain protein 1	NM_015846|MBD1|4152|methyl-CpG binding domain protein 1	NM_015847|MBD1|4152|methyl-CpG binding domain protein 1
hg18_v1_chr9_+_111582317_111582556	0.230393	UGCAUUG	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_053016|PALM2|114299|paralemmin 2	NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ312216|PALM2|114299|paralemmin 2	AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough
hg18_v1_chr7_-_127458231_127458313	0.227694	UGCAUUG	BC111561|LRRC4|64101|leucine rich repeat containing 4	BC111745|LRRC4|64101|leucine rich repeat containing 4	AF196976|LRRC4|64101|leucine rich repeat containing 4	AJ297858|LRRC4|64101|leucine rich repeat containing 4	NM_022143|LRRC4|64101|leucine rich repeat containing 4	AK172751|LRRC4|64101|leucine rich repeat containing 4	AK314047|LRRC4|64101|leucine rich repeat containing 4
hg18_v1_chr12_+_52618815_52618957	0.226841	UGCAUUG	CR611726|HOXC13|3229|homeobox C13	AF255676|HOXC13|3229|homeobox C13	NM_017410|HOXC13|3229|homeobox C13	BC090850|HOXC13|3229|homeobox C13	AF263466|HOXC13|3229|homeobox C13	BC002754|HOXC13|3229|homeobox C13	BT009908|HOXC13|3229|homeobox C13
hg18_v1_chr4_+_39734902_39734952	0.224715	UGCAUUG	AK001542|N4BP2|55728|NEDD4 binding protein 2	NM_018177|N4BP2|55728|NEDD4 binding protein 2	AB371584|N4BP2|55728|NEDD4 binding protein 2
hg18_v1_chrX_-_128805400_128805619	0.223205	UGCAUUG	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr5_+_153550463_153550639	0.222363	UGCAUUG	BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)
hg18_v1_chr8_+_104900591_104900911	0.222344	UGCAUUG	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr1_+_26609819_26609857	0.221992	UGCAUUG	BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)	NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)
hg18_v1_chr11_+_18676913_18676931	0.22045	UGCAUUG	CR595902|TMEM86A|144110|transmembrane protein 86A	BC035692|TMEM86A|144110|transmembrane protein 86A	NM_153347|TMEM86A|144110|transmembrane protein 86A
hg18_v1_chr10_+_50557689_50557737	0.219438	UGCAUUG	NM_001042427|C10orf53|282966|chromosome 10 open reading frame 53	NM_182554|C10orf53|282966|chromosome 10 open reading frame 53	AK091773|C10orf53|282966|chromosome 10 open reading frame 53	BC028127|C10orf53|282966|chromosome 10 open reading frame 53
hg18_v1_chr5_-_58331515_58331515	0.217798	UGCAUUG	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr19_+_12966970_12967835	0.217657	UGCAUUG	NM_002501|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BT019732|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg18_v1_chr2_-_51113040_51113177	0.215704	UGCAUUG	EF539882|NRXN1|9378|neurexin 1	AK124726|NRXN1|9378|neurexin 1	NM_001135659|NRXN1|9378|neurexin 1	NM_004801|NRXN1|9378|neurexin 1
hg18_v1_chr3_+_176059763_176059805	0.213945	UGCAUUG	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg18_v1_chr3_+_157491469_157491539	0.202687	UGCAUUG	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg18_v1_chr7_-_139123906_139124843	0.201982	UGCAUUG	AF208291|HIPK2|28996|homeodomain interacting protein kinase 2	AF326592|HIPK2|28996|homeodomain interacting protein kinase 2	NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2	NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2
hg18_v1_chr7_-_71440143_71440338	0.198634	UGCAUUG	NM_001017440|CALN1|83698|calneuron 1
hg18_v1_chr3_+_36396948_36397164	0.198544	UGCAUUG	AK313493|STAC|6769|SH3 and cysteine rich domain	BC020221|STAC|6769|SH3 and cysteine rich domain	AK299160|STAC|6769|SH3 and cysteine rich domain	AK302697|STAC|6769|SH3 and cysteine rich domain	D86640|STAC|6769|SH3 and cysteine rich domain	NM_003149|STAC|6769|SH3 and cysteine rich domain	DQ892180|STAC|6769|SH3 and cysteine rich domain	DQ895374|STAC|6769|SH3 and cysteine rich domain	DQ895375|STAC|6769|SH3 and cysteine rich domain	AK310425|STAC|6769|SH3 and cysteine rich domain
hg18_v1_chr4_+_134289893_134289919	0.197774	UGCAUUG	AB037821|PCDH10|57575|protocadherin 10	AY013874|PCDH10|57575|protocadherin 10	NM_020815|PCDH10|57575|protocadherin 10	NM_032961|PCDH10|57575|protocadherin 10
hg18_v1_chr15_-_91433165_91433550	0.195951	UGCAUUG	AM392685|RGMA|56963|RGM domain family, member A	BC146682|RGMA|56963|RGM domain family, member A	AK074980|RGMA|56963|RGM domain family, member A	BC140838|RGMA|56963|RGM domain family, member A	BC151132|RGMA|56963|RGM domain family, member A	AL136826|RGMA|56963|RGM domain family, member A	AK074910|RGMA|56963|RGM domain family, member A	NM_020211|RGMA|56963|RGM domain family, member A
hg18_v1_chr14_-_98807574_98807712	0.195168	UGCAUUG	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)
hg18_v1_chr8_-_93184629_93184633	0.190766	UGCAUUG	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr5_-_37871349_37871349	0.189715	UGCAUUG	AJ001899|GDNF|2668|glial cell derived neurotrophic factor	NM_199231|GDNF|2668|glial cell derived neurotrophic factor
hg18_v1_chrX_-_73751185_73751194	0.186911	UGCAUUG	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chr17_-_959007_959111	0.18582	UGCAUUG	AK295191|ABR|29|active BCR-related gene	NM_001092|ABR|29|active BCR-related gene	BC036807|ABR|29|active BCR-related gene
hg18_v1_chr12_+_26096757_26096763	0.183167	UGCAUUG	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr10_+_35575958_35575958	0.182777	UGCAUUG	AF429969|CCNY|219771|cyclin Y	AK057280|CCNY|219771|cyclin Y	NM_181698|CCNY|219771|cyclin Y
hg18_v1_chr15_-_91417362_91417392	0.178704	UGCAUUG	AK074966|RGMA|56963|RGM domain family, member A	BC015886|RGMA|56963|RGM domain family, member A	NM_001166286|RGMA|56963|RGM domain family, member A
hg18_v1_chr20_-_61907299_61907299	0.178573	UGCAUUG	AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46	NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46
hg18_v1_chr6_-_91063181_91063284	0.177439	UGCAUUG	AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr10_+_11099860_11099932	0.176731	UGCAUUG	AK314087|CELF2|10659|CUGBP, Elav-like family member 2	NM_006561|CELF2|10659|CUGBP, Elav-like family member 2	BC036391|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr4_-_86106567_86106567	0.173366	UGCAUUG	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg18_v1_chr12_-_88270375_88270505	0.172991	UGCAUUG	CR593797|DUSP6|1848|dual specificity phosphatase 6	BC037236|DUSP6|1848|dual specificity phosphatase 6	AK091753|DUSP6|1848|dual specificity phosphatase 6	AB189400|DUSP6|1848|dual specificity phosphatase 6	NM_001946|DUSP6|1848|dual specificity phosphatase 6	NM_022652|DUSP6|1848|dual specificity phosphatase 6
hg18_v1_chr6_+_50894397_50894591	0.172108	UGCAUUG	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg18_v1_chr3_-_64186151_64186170	0.171293	UGCAUUG	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)	AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)	NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)
hg18_v1_chr6_-_91063301_91063365	0.168699	UGCAUUG	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr4_+_54790020_54790054	0.167439	UGCAUUG	NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg18_v1_chr1_+_100776280_100776315	0.164952	UGCAUUG	AB042410|GPR88|54112|G protein-coupled receptor 88	BC036775|GPR88|54112|G protein-coupled receptor 88	NM_022049|GPR88|54112|G protein-coupled receptor 88
hg18_v1_chr17_+_78630793_78630870	0.163553	UGCAUUG	BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like	NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like	BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like	BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like
hg18_v1_chr1_-_198645788_198645846	0.158744	UGCAUUG	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg18_v1_chr21_+_36993860_36993890	0.157961	UGCAUUG	NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)	NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)	BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)
hg18_v1_chr10_-_52315436_52315446	0.15635	UGCAUUG	BC054873|A1CF|29974|APOBEC1 complementation factor	AK000324|A1CF|29974|APOBEC1 complementation factor	NM_001198818|A1CF|29974|APOBEC1 complementation factor	NM_001198819|A1CF|29974|APOBEC1 complementation factor	NM_001198820|A1CF|29974|APOBEC1 complementation factor	NM_014576|A1CF|29974|APOBEC1 complementation factor	NM_138932|A1CF|29974|APOBEC1 complementation factor	NM_138933|A1CF|29974|APOBEC1 complementation factor
hg18_v1_chr9_+_129870268_129870340	0.150509	UGCAUUG	AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr15_+_89444433_89444548	0.149113	UGCAUUG	NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B	BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr14_+_93710401_93710554	0.146751	UGCAUUG	NM_020958|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4	NM_058237|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4	BC002650|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4	BC068491|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4	AB046842|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4
hg18_v1_chr15_-_91432755_91432755	0.144775	UGCAUUG	NM_001166287|RGMA|56963|RGM domain family, member A
hg18_v1_chr9_+_111850698_111850763	0.144681	UGCAUUG	BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2	BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2	NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2	NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2
hg18_v1_chrX_-_79951838_79951888	0.143403	UGCAUUG	BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3	AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3	NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3
hg18_v1_chrX_-_48713194_48713196	0.142923	UGCAUUG	BC045659|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1	NM_004979|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1
hg18_v1_chr10_+_75174125_75174149	0.141626	UGCAUUG	AK303085|SEC24C|9632|SEC24 family, member C (S. cerevisiae)	AK298598|SEC24C|9632|SEC24 family, member C (S. cerevisiae)	NM_004922|SEC24C|9632|SEC24 family, member C (S. cerevisiae)	NM_198597|SEC24C|9632|SEC24 family, member C (S. cerevisiae)	AK316451|SEC24C|9632|SEC24 family, member C (S. cerevisiae)	BC018928|SEC24C|9632|SEC24 family, member C (S. cerevisiae)
hg18_v1_chr14_+_91858677_91858677	0.141598	UGCAUUG	AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg18_v1_chr1_+_61319976_61320121	0.140843	UGCAUUG	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg18_v1_chr12_+_68150332_68150487	0.138164	UGCAUUG	NM_001042555|FRS2|10818|fibroblast growth factor receptor substrate 2	NM_006654|FRS2|10818|fibroblast growth factor receptor substrate 2	BC021562|FRS2|10818|fibroblast growth factor receptor substrate 2	AK312477|FRS2|10818|fibroblast growth factor receptor substrate 2
hg18_v1_chr10_-_118491971_118492166	0.135182	UGCAUUG	AB007877|HSPA12A|259217|heat shock 70kDa protein 12A	NM_025015|HSPA12A|259217|heat shock 70kDa protein 12A
hg18_v1_chr8_+_106400322_106400322	0.134227	UGCAUUG	AF119334|ZFPM2|23414|zinc finger protein, multitype 2	BC109222|ZFPM2|23414|zinc finger protein, multitype 2	BC109223|ZFPM2|23414|zinc finger protein, multitype 2	NM_012082|ZFPM2|23414|zinc finger protein, multitype 2
hg18_v1_chr1_+_117950029_117950189	0.132563	UGCAUUG	NM_017709|FAM46C|54855|family with sequence similarity 46, member C
hg18_v1_chr15_-_91417895_91417942	0.131786	UGCAUUG	AK309814|RGMA|56963|RGM domain family, member A	AK125204|RGMA|56963|RGM domain family, member A	NM_001166288|RGMA|56963|RGM domain family, member A	NM_001166289|RGMA|56963|RGM domain family, member A
hg18_v1_chr9_-_88751923_88751923	0.131215	UGCAUUG	L13698|GAS1|2619|growth arrest-specific 1	NM_002048|GAS1|2619|growth arrest-specific 1
hg18_v1_chr2_+_101680594_101680974	0.131132	UGCAUUG	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr20_+_34206070_34206089	0.129222	UGCAUUG	NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1	AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1
hg18_v1_chr8_-_4839670_4839735	0.125969	UGCAUUG	AF333704|CSMD1|64478|CUB and Sushi multiple domains 1	NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1
hg18_v1_chr16_+_2527952_2527986	0.122448	UGCAUUG	NM_002613|PDPK1|5170|3-phosphoinositide dependent protein kinase-1	NM_031268|PDPK1|5170|3-phosphoinositide dependent protein kinase-1
hg18_v1_chr10_-_61570665_61570779	0.119213	UGCAUUG	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr3_+_38181972_38182118	0.11811	UGCAUUG	AB017642|OXSR1|9943|oxidative-stress responsive 1	NM_005109|OXSR1|9943|oxidative-stress responsive 1	BC008726|OXSR1|9943|oxidative-stress responsive 1
hg18_v1_chr18_-_44729700_44729700	0.116834	UGCAUUG	AK301535|SMAD7|4092|SMAD family member 7	NM_001190822|SMAD7|4092|SMAD family member 7
hg18_v1_chr1_-_152422322_152422348	0.114937	UGCAUUG	AK298678|TPM3|7170|tropomyosin 3	NM_001043351|TPM3|7170|tropomyosin 3	NM_001043352|TPM3|7170|tropomyosin 3	NM_001043353|TPM3|7170|tropomyosin 3	NM_153649|TPM3|7170|tropomyosin 3
hg18_v1_chr6_+_144040751_144040989	0.113748	UGCAUUG	AK298263|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2	NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2	CR749345|PHACTR2|9749|phosphatase and actin regulator 2	AK297799|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr4_+_88939725_88939765	0.113158	UGCAUUG	NM_004967|IBSP|3381|integrin-binding sialoprotein	J05213|IBSP|3381|integrin-binding sialoprotein
hg18_v1_chr4_+_152549776_152549847	0.112736	UGCAUUG	NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1
hg18_v1_chr7_+_138566770_138566770	0.109895	UGCAUUG	NM_173569|UBN2|254048|ubinuclein 2
hg18_v1_chr17_-_77824849_77824890	0.109617	UGCAUUG	BC003558|CSNK1D|1453|casein kinase 1, delta	BC015775|CSNK1D|1453|casein kinase 1, delta	NM_001893|CSNK1D|1453|casein kinase 1, delta	NM_139062|CSNK1D|1453|casein kinase 1, delta	AK291758|CSNK1D|1453|casein kinase 1, delta	AK295638|CSNK1D|1453|casein kinase 1, delta	AK303365|CSNK1D|1453|casein kinase 1, delta
hg18_v1_chr10_+_11087259_11087268	0.107265	UGCAUUG	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr17_+_38430773_38430932	0.106554	UGCAUUG	AK290199|RND2|8153|Rho family GTPase 2	NM_005440|RND2|8153|Rho family GTPase 2	BC094842|RND2|8153|Rho family GTPase 2	BC104986|RND2|8153|Rho family GTPase 2	BC104990|RND2|8153|Rho family GTPase 2	AF498968|RND2|8153|Rho family GTPase 2	BT019394|RND2|8153|Rho family GTPase 2	X95456|RND2|8153|Rho family GTPase 2	BC018096|RND2|8153|Rho family GTPase 2	AB209778|RND2|8153|Rho family GTPase 2
hg18_v1_chr12_+_64504408_64504540	0.104471	UGCAUUG	AY601861|HMGA2|8091|high mobility group AT-hook 2	AY601862|HMGA2|8091|high mobility group AT-hook 2	AY601863|HMGA2|8091|high mobility group AT-hook 2	AY601864|HMGA2|8091|high mobility group AT-hook 2	AY601865|HMGA2|8091|high mobility group AT-hook 2	AY601866|HMGA2|8091|high mobility group AT-hook 2	AY601867|HMGA2|8091|high mobility group AT-hook 2	NM_003483|HMGA2|8091|high mobility group AT-hook 2	NM_003484|HMGA2|8091|high mobility group AT-hook 2	U28749|HMGA2|8091|high mobility group AT-hook 2	Z31595|HMGA2|8091|high mobility group AT-hook 2
hg18_v1_chr17_-_59932872_59932947	0.102337	UGCAUUG	NM_004396|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
hg18_v1_chr1_-_225572419_225572928	0.101045	UGCAUUG	NM_003607|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)	NM_014826|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)	U59305|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)
hg18_v1_chr7_+_28305464_28305464	0.10084	UGCAUUG	L05913|CREB5|9586|cAMP responsive element binding protein 5	NM_182899|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr7_+_20621769_20621876	0.100261	UGCAUUG	AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg18_v1_chr17_-_17681034_17681064	0.0993425	UGCAUUG	BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1	NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1	NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1
hg18_v1_chr18_-_17434655_17434698	0.0975509	UGCAUUG	NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)	AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)
hg18_v1_chr3_-_143201878_143201918	0.0972414	UGCAUUG	AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chrX_-_19598912_19599042	0.0971788	UGCAUUG	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1	NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr7_-_71515295_71515295	0.0943908	UGCAUUG	NM_031468|CALN1|83698|calneuron 1
hg18_v1_chr12_+_970613_970814	0.0934035	UGCAUUG	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1
hg18_v1_chr8_-_93177057_93177057	0.0923734	UGCAUUG	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr21_-_43671355_43671492	0.0916889	UGCAUUG	AB047786|SIK1|150094|salt-inducible kinase 1	NM_173354|SIK1|150094|salt-inducible kinase 1	BC038504|SIK1|150094|salt-inducible kinase 1
hg18_v1_chr7_+_86812864_86812997	0.0912192	UGCAUUG	NM_001143935|CROT|54677|carnitine O-octanoyltransferase	NM_021151|CROT|54677|carnitine O-octanoyltransferase	AK127901|CROT|54677|carnitine O-octanoyltransferase	AK313487|CROT|54677|carnitine O-octanoyltransferase	BC051874|CROT|54677|carnitine O-octanoyltransferase	BC039004|CROT|54677|carnitine O-octanoyltransferase	BC012483|CROT|54677|carnitine O-octanoyltransferase	BC019226|CROT|54677|carnitine O-octanoyltransferase	AF073770|CROT|54677|carnitine O-octanoyltransferase	AF168793|CROT|54677|carnitine O-octanoyltransferase
hg18_v1_chr13_-_35603513_35603520	0.0910957	UGCAUUG	NM_004734|DCLK1|9201|doublecortin-like kinase 1
hg18_v1_chr2_-_180319013_180319013	0.0891021	UGCAUUG	AK096822|ZNF385B|151126|zinc finger protein 385B	NM_001113397|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr18_-_43711452_43711522	0.0879116	UGCAUUG	NM_001003652|SMAD2|4087|SMAD family member 2	NM_001135937|SMAD2|4087|SMAD family member 2
hg18_v1_chr1_-_240754620_240754620	0.0868948	UGCAUUG	AK098092|PLD5|200150|phospholipase D family, member 5	NM_152666|PLD5|200150|phospholipase D family, member 5
hg18_v1_chrX_+_46962997_46963105	0.08671	UGCAUUG	NM_006201|CDK16|5127|cyclin-dependent kinase 16	AK096881|CDK16|5127|cyclin-dependent kinase 16	AK303849|CDK16|5127|cyclin-dependent kinase 16	BC006190|CDK16|5127|cyclin-dependent kinase 16	CR620813|CDK16|5127|cyclin-dependent kinase 16	AK290145|CDK16|5127|cyclin-dependent kinase 16
hg18_v1_chrX_+_134306337_134306444	0.0845804	UGCAUUG	AY927530|ZNF449|203523|zinc finger protein 449	NM_152695|ZNF449|203523|zinc finger protein 449	AK314344|ZNF449|203523|zinc finger protein 449	AK074194|ZNF449|203523|zinc finger protein 449	AL833407|ZNF449|203523|zinc finger protein 449	AY280801|ZNF449|203523|zinc finger protein 449	BC060768|ZNF449|203523|zinc finger protein 449	BC065938|ZNF449|203523|zinc finger protein 449	AL833109|ZNF449|203523|zinc finger protein 449
hg18_v1_chr8_+_8897723_8897828	0.0828446	UGCAUUG	NM_153332|ERI1|90459|exoribonuclease 1	AL137679|ERI1|90459|exoribonuclease 1
hg18_v1_chr2_-_180434345_180434476	0.0827945	UGCAUUG	NM_152520|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr7_+_94374862_94374943	0.081461	UGCAUUG	NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory (inhibitor) subunit 9A
hg18_v1_chr13_-_109236897_109236922	0.0803287	UGCAUUG	NM_003749|IRS2|8660|insulin receptor substrate 2	AF073310|IRS2|8660|insulin receptor substrate 2
hg18_v1_chr7_-_105304159_105304283	0.0797223	UGCAUUG	AK095475|ATXN7L1|222255|ataxin 7-like 1	AK097574|ATXN7L1|222255|ataxin 7-like 1	BC030616|ATXN7L1|222255|ataxin 7-like 1	NM_020725|ATXN7L1|222255|ataxin 7-like 1	NM_152749|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr3_+_85090721_85090917	0.0795524	UGCAUUG	BC105999|CADM2|253559|cell adhesion molecule 2	NM_001167674|CADM2|253559|cell adhesion molecule 2	NM_001167675|CADM2|253559|cell adhesion molecule 2	AK295885|CADM2|253559|cell adhesion molecule 2	AL834270|CADM2|253559|cell adhesion molecule 2
hg18_v1_chr5_-_160907702_160907718	0.0771159	UGCAUUG	BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	CR621869|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2
hg18_v1_chr11_+_122214415_122214464	0.0758559	UGCAUUG	BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule	AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule	AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule	NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule
hg18_v1_chr4_+_30330963_30331231	0.075539	UGCAUUG	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032456|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg18_v1_chr10_-_93992982_93993017	0.0750641	UGCAUUG	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3
hg18_v1_chrX_+_46962370_46962737	0.0734189	UGCAUUG	NM_033018|CDK16|5127|cyclin-dependent kinase 16	BC001048|CDK16|5127|cyclin-dependent kinase 16	BC015607|CDK16|5127|cyclin-dependent kinase 16
hg18_v1_chr2_-_222145240_222145269	0.073152	UGCAUUG	BC026327|EPHA4|2043|EPH receptor A4	L36645|EPHA4|2043|EPH receptor A4	BC105000|EPHA4|2043|EPH receptor A4	BC105002|EPHA4|2043|EPH receptor A4	NM_004438|EPHA4|2043|EPH receptor A4	AK300772|EPHA4|2043|EPH receptor A4	AK225181|EPHA4|2043|EPH receptor A4	AK312380|EPHA4|2043|EPH receptor A4
hg18_v1_chr7_+_20653490_20653742	0.0730398	UGCAUUG	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	CR595059|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg18_v1_chr5_+_31229549_31229589	0.0725849	UGCAUUG	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chr10_+_96152175_96152177	0.0725457	UGCAUUG	NM_015188|TBC1D12|23232|TBC1 domain family, member 12
hg18_v1_chr12_+_62524778_62524849	0.071519	UGCAUUG	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr14_-_59001804_59001814	0.0706638	UGCAUUG	BC032831|GPR135|64582|G protein-coupled receptor 135	NM_022571|GPR135|64582|G protein-coupled receptor 135
hg18_v1_chr18_+_42007984_42008001	0.0701554	UGCAUUG	NM_001008239|C18orf25|147339|chromosome 18 open reading frame 25	NM_145055|C18orf25|147339|chromosome 18 open reading frame 25	AK292981|C18orf25|147339|chromosome 18 open reading frame 25
hg18_v1_chr1_-_85515174_85515174	0.0700596	UGCAUUG	NM_003921|BCL10|8915|B-cell CLL/lymphoma 10
hg18_v1_chr15_-_91418095_91418219	0.0693423	UGCAUUG	AK299363|RGMA|56963|RGM domain family, member A	NM_001166283|RGMA|56963|RGM domain family, member A
hg18_v1_chrX_-_19727828_19727839	0.0693169	UGCAUUG	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1
hg18_v1_chr4_+_89115825_89115843	0.0691784	UGCAUUG	NM_000582|SPP1|6696|secreted phosphoprotein 1	NM_001040058|SPP1|6696|secreted phosphoprotein 1	NM_001040060|SPP1|6696|secreted phosphoprotein 1	BC093033|SPP1|6696|secreted phosphoprotein 1	CR602900|SPP1|6696|secreted phosphoprotein 1
hg18_v1_chr7_+_87095640_87095866	0.0632278	UGCAUUG	AK055233|RUNDC3B|154661|RUN domain containing 3B	NM_001134405|RUNDC3B|154661|RUN domain containing 3B	NM_001134406|RUNDC3B|154661|RUN domain containing 3B	NM_138290|RUNDC3B|154661|RUN domain containing 3B	BC022520|RUNDC3B|154661|RUN domain containing 3B	AK293607|RUNDC3B|154661|RUN domain containing 3B	AK294039|RUNDC3B|154661|RUN domain containing 3B
hg18_v1_chr3_+_179759181_179759311	0.0629536	UGCAUUG	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr11_+_109469296_109469385	0.0579767	UGCAUUG	NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C	AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C
hg18_v1_chr8_-_93099040_93099083	0.0567726	UGCAUUG	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr3_+_43707362_43707488	0.0554754	UGCAUUG	NM_016006|ABHD5|51099|abhydrolase domain containing 5	BC021958|ABHD5|51099|abhydrolase domain containing 5	AK313811|ABHD5|51099|abhydrolase domain containing 5	AF151816|ABHD5|51099|abhydrolase domain containing 5	DQ891175|ABHD5|51099|abhydrolase domain containing 5	DQ894357|ABHD5|51099|abhydrolase domain containing 5
hg18_v1_chr6_+_143971009_143971102	0.0538988	UGCAUUG	NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2	NM_014721|PHACTR2|9749|phosphatase and actin regulator 2	AK300221|PHACTR2|9749|phosphatase and actin regulator 2	AB014580|PHACTR2|9749|phosphatase and actin regulator 2	BC152416|PHACTR2|9749|phosphatase and actin regulator 2	BC150630|PHACTR2|9749|phosphatase and actin regulator 2
hg18_v1_chr5_+_138116972_138117015	0.0536376	UGCAUUG	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr3_-_143350898_143351131	0.0516991	UGCAUUG	AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	CR597951|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr8_-_93181091_93181091	0.0516974	UGCAUUG	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr11_+_69165018_69165056	0.0513668	UGCAUUG	NM_053056|CCND1|595|cyclin D1
hg18_v1_chr5_+_52812236_52812378	0.0504942	UGCAUUG	NM_006350|FST|10468|follistatin	NM_013409|FST|10468|follistatin	AB451330|FST|10468|follistatin	AB451474|FST|10468|follistatin	CR541813|FST|10468|follistatin	DQ893433|FST|10468|follistatin	DQ896745|FST|10468|follistatin
hg18_v1_chr8_-_93176618_93176665	0.0501975	UGCAUUG	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr14_-_77244073_77244138	0.0489159	UGCAUUG	BC015024|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)	X91992|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)	DQ890543|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)	DQ893703|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)	CR604550|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)	BC025787|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)	NM_006020|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)	BX537699|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)
hg18_v1_chr3_-_64648370_64648404	0.0484925	UGCAUUG	AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9
hg18_v1_chr3_-_44992604_44992687	0.04764	UGCAUUG	BC015467|ZDHHC3|51304|zinc finger, DHHC-type containing 3	AF247703|ZDHHC3|51304|zinc finger, DHHC-type containing 3	NM_001135179|ZDHHC3|51304|zinc finger, DHHC-type containing 3	NM_016598|ZDHHC3|51304|zinc finger, DHHC-type containing 3
hg18_v1_chr2_-_180135559_180135559	0.0475827	UGCAUUG	AK057999|ZNF385B|151126|zinc finger protein 385B	NM_001113398|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chrX_-_102828238_102828401	0.0465688	UGCAUUG	BC056899|MORF4L2|9643|mortality factor 4 like 2	AF167174|MORF4L2|9643|mortality factor 4 like 2	AF100620|MORF4L2|9643|mortality factor 4 like 2	D14812|MORF4L2|9643|mortality factor 4 like 2	CR609555|MORF4L2|9643|mortality factor 4 like 2	AB050778|MORF4L2|9643|mortality factor 4 like 2	CR592635|MORF4L2|9643|mortality factor 4 like 2	CR599214|MORF4L2|9643|mortality factor 4 like 2	CR591672|MORF4L2|9643|mortality factor 4 like 2	CR591939|MORF4L2|9643|mortality factor 4 like 2	CR602458|MORF4L2|9643|mortality factor 4 like 2	CR604767|MORF4L2|9643|mortality factor 4 like 2	CR605347|MORF4L2|9643|mortality factor 4 like 2	CR606859|MORF4L2|9643|mortality factor 4 like 2	CR614320|MORF4L2|9643|mortality factor 4 like 2	CR614948|MORF4L2|9643|mortality factor 4 like 2	CR623503|MORF4L2|9643|mortality factor 4 like 2	CR596284|MORF4L2|9643|mortality factor 4 like 2	CR599203|MORF4L2|9643|mortality factor 4 like 2	CR599829|MORF4L2|9643|mortality factor 4 like 2	CR600428|MORF4L2|9643|mortality factor 4 like 2	CR621359|MORF4L2|9643|mortality factor 4 like 2	CR621622|MORF4L2|9643|mortality factor 4 like 2	CR605193|MORF4L2|9643|mortality factor 4 like 2	CR620070|MORF4L2|9643|mortality factor 4 like 2	CR626356|MORF4L2|9643|mortality factor 4 like 2	AK126115|MORF4L2|9643|mortality factor 4 like 2	AK223504|MORF4L2|9643|mortality factor 4 like 2	BC093013|MORF4L2|9643|mortality factor 4 like 2	CR614933|MORF4L2|9643|mortality factor 4 like 2	NM_001142418|MORF4L2|9643|mortality factor 4 like 2	NM_001142423|MORF4L2|9643|mortality factor 4 like 2	NM_001142424|MORF4L2|9643|mortality factor 4 like 2	NM_001142425|MORF4L2|9643|mortality factor 4 like 2	NM_001142426|MORF4L2|9643|mortality factor 4 like 2	NM_001142429|MORF4L2|9643|mortality factor 4 like 2	NM_001142430|MORF4L2|9643|mortality factor 4 like 2	NM_012286|MORF4L2|9643|mortality factor 4 like 2
hg18_v1_chr7_+_28692122_28692294	0.0438062	UGCAUUG	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr5_+_134237325_134237358	0.0424748	UGCAUUG	AK056512|TXNDC15|79770|thioredoxin domain containing 15	NM_024715|TXNDC15|79770|thioredoxin domain containing 15
hg18_v1_chr5_+_155686333_155686344	0.0422014	UGCAUUG	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg18_v1_chr11_-_102468113_102468153	0.0419701	UGCAUUG	AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
hg18_v1_chrX_-_128804972_128805241	0.0397133	UGCAUUG	AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9	BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9	AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9	NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9
hg18_v1_chr22_-_26645214_26645315	0.0394115	UGCAUUG	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta	D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta	AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta	CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta	NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta
hg18_v1_chr1_-_215329569_215329600	0.0383045	UGCAUUG	AF058291|ESRRG|2104|estrogen-related receptor gamma	AK298851|ESRRG|2104|estrogen-related receptor gamma	AK291028|ESRRG|2104|estrogen-related receptor gamma	NM_206594|ESRRG|2104|estrogen-related receptor gamma	NM_206595|ESRRG|2104|estrogen-related receptor gamma	BX649009|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr8_-_116750277_116750401	0.0381556	UGCAUUG	BC125020|TRPS1|7227|trichorhinophalangeal syndrome I	AK309357|TRPS1|7227|trichorhinophalangeal syndrome I	NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I
hg18_v1_chr5_+_172415891_172416089	0.037826	UGCAUUG	BX647768|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41	NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41	NM_153607|C5orf41|153222|chromosome 5 open reading frame 41	AK300043|C5orf41|153222|chromosome 5 open reading frame 41	AY139008|C5orf41|153222|chromosome 5 open reading frame 41	BC041709|C5orf41|153222|chromosome 5 open reading frame 41	AY174896|C5orf41|153222|chromosome 5 open reading frame 41	AK124117|C5orf41|153222|chromosome 5 open reading frame 41	BX647573|C5orf41|153222|chromosome 5 open reading frame 41	AK291677|C5orf41|153222|chromosome 5 open reading frame 41
hg18_v1_chrX_-_102829621_102829741	0.034123	UGCAUUG	CR623631|MORF4L2|9643|mortality factor 4 like 2	CR618186|MORF4L2|9643|mortality factor 4 like 2	AK302083|MORF4L2|9643|mortality factor 4 like 2	AK056012|MORF4L2|9643|mortality factor 4 like 2	CR604083|MORF4L2|9643|mortality factor 4 like 2	NM_001142419|MORF4L2|9643|mortality factor 4 like 2	NM_001142420|MORF4L2|9643|mortality factor 4 like 2	NM_001142421|MORF4L2|9643|mortality factor 4 like 2	NM_001142422|MORF4L2|9643|mortality factor 4 like 2	NM_001142427|MORF4L2|9643|mortality factor 4 like 2	NM_001142428|MORF4L2|9643|mortality factor 4 like 2	NM_001142431|MORF4L2|9643|mortality factor 4 like 2	NM_001142432|MORF4L2|9643|mortality factor 4 like 2
hg18_v1_chr6_-_56615544_56615652	0.0311427	UGCAUUG	AF400226|DST|667|dystonin	AF400227|DST|667|dystonin	M69225|DST|667|dystonin	BC065536|DST|667|dystonin	L11690|DST|667|dystonin	NM_001723|DST|667|dystonin	NM_015548|DST|667|dystonin
hg18_v1_chr2_-_160469512_160469560	0.0305552	UGCAUUG	NM_001198759|LY75-CD302|100526664|LY75-CD302 read-through transcript	NM_001198760|LY75-CD302|100526664|LY75-CD302 read-through transcript	NM_002349|LY75|4065|lymphocyte antigen 75
hg18_v1_chr2_-_50428395_50428457	0.0300882	UGCAUUG	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg18_v1_chr21_-_38792173_38792297	0.0282758	UGCAUUG	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg18_v1_chr1_+_10193267_10193449	0.0277827	UGCAUUG	AK308121|KIF1B|23095|kinesin family member 1B	NM_015074|KIF1B|23095|kinesin family member 1B	NM_183416|KIF1B|23095|kinesin family member 1B	AF257176|KIF1B|23095|kinesin family member 1B	AY139835|KIF1B|23095|kinesin family member 1B
hg18_v1_chr1_+_40929828_40929890	0.0274795	UGCAUUG	NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma	NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma	NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma	NM_014223|NFYC|4802|nuclear transcription factor Y, gamma
hg18_v1_chrX_+_122821217_122822029	0.0264037	UGCAUUG	AK313883|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg18_v1_chr19_-_60664860_60664875	0.0261473	UGCAUUG	NM_001136201|ISOC2|79763|isochorismatase domain containing 2	NM_001136202|ISOC2|79763|isochorismatase domain containing 2	NM_024710|ISOC2|79763|isochorismatase domain containing 2
hg18_v1_chr11_+_64646275_64646377	0.0252858	UGCAUUG	NM_004927|MRPL49|740|mitochondrial ribosomal protein L49	CR600382|MRPL49|740|mitochondrial ribosomal protein L49	AK129986|MRPL49|740|mitochondrial ribosomal protein L49	AK311821|MRPL49|740|mitochondrial ribosomal protein L49	AK129795|MRPL49|740|mitochondrial ribosomal protein L49	CR625371|MRPL49|740|mitochondrial ribosomal protein L49
hg18_v1_chr10_-_98336783_98336844	0.0252534	UGCAUUG	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3	BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3	BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3	BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3	NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr22_-_40346788_40346977	0.0240827	UGCAUUG	CR456458|PPPDE2|27351|PPPDE peptidase domain containing 2	NM_015704|PPPDE2|27351|PPPDE peptidase domain containing 2	BC093956|PPPDE2|27351|PPPDE peptidase domain containing 2	BC112179|PPPDE2|27351|PPPDE peptidase domain containing 2	BC171724|PPPDE2|27351|PPPDE peptidase domain containing 2	CR605886|PPPDE2|27351|PPPDE peptidase domain containing 2	AF038183|PPPDE2|27351|PPPDE peptidase domain containing 2	CR605156|PPPDE2|27351|PPPDE peptidase domain containing 2
hg18_v1_chr16_+_84204424_84204485	0.0233264	UGCAUUG	NM_014615|KIAA0182|23199|KIAA0182	D80004|KIAA0182|23199|KIAA0182
hg18_v1_chr10_+_16518947_16519036	0.0220888	UGCAUUG	AK314910|PTER|9317|phosphotriesterase related	BC015092|PTER|9317|phosphotriesterase related	NM_001001484|PTER|9317|phosphotriesterase related	NM_030664|PTER|9317|phosphotriesterase related	BC050411|PTER|9317|phosphotriesterase related	BX648556|PTER|9317|phosphotriesterase related	AK095486|PTER|9317|phosphotriesterase related	AF212237|PTER|9317|phosphotriesterase related
hg18_v1_chr3_+_174598937_174598937	0.022082	UGCAUUG	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg18_v1_chr4_-_103967784_103967859	0.0203752	UGCAUUG	CR619029|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC066917|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	CR608063|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181887|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_181891|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	CR620503|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AL833414|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
hg18_v1_chr19_+_46416938_46416964	0.0202714	UGCAUUG	NM_001699|AXL|558|AXL receptor tyrosine kinase	NM_021913|AXL|558|AXL receptor tyrosine kinase
hg18_v1_chr12_+_26003218_26003319	0.0201653	UGCAUUG	NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr15_-_21483503_21483548	0.0198652	UGCAUUG	U35139|NDN|4692|necdin homolog (mouse)	CR591182|NDN|4692|necdin homolog (mouse)	CR601504|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	CR618894|NDN|4692|necdin homolog (mouse)	CR590044|NDN|4692|necdin homolog (mouse)	CR595233|NDN|4692|necdin homolog (mouse)	CR595786|NDN|4692|necdin homolog (mouse)	CR599213|NDN|4692|necdin homolog (mouse)	CR590944|NDN|4692|necdin homolog (mouse)	CR593341|NDN|4692|necdin homolog (mouse)	CR596254|NDN|4692|necdin homolog (mouse)	CR596560|NDN|4692|necdin homolog (mouse)	CR597888|NDN|4692|necdin homolog (mouse)	CR598564|NDN|4692|necdin homolog (mouse)	CR609537|NDN|4692|necdin homolog (mouse)	CR609863|NDN|4692|necdin homolog (mouse)	CR611314|NDN|4692|necdin homolog (mouse)	CR616323|NDN|4692|necdin homolog (mouse)	CR619220|NDN|4692|necdin homolog (mouse)	CR619365|NDN|4692|necdin homolog (mouse)	CR622500|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)	CR614412|NDN|4692|necdin homolog (mouse)
hg18_v1_chr3_-_15773061_15773101	0.0186004	UGCAUUG	AY367056|ANKRD28|23243|ankyrin repeat domain 28	NM_001195099|ANKRD28|23243|ankyrin repeat domain 28	BC035170|ANKRD28|23243|ankyrin repeat domain 28	BC048975|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr11_+_113815317_113815546	0.0180497	UGCAUUG	NM_015523|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AF151872|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AL110239|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK312042|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC143701|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC105024|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC105026|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK223200|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC107887|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC003502|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC066947|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AM392652|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	CR533500|REXO2|25996|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
hg18_v1_chr3_-_161766055_161766110	0.0165882	UGCAUUG	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg18_v1_chr3_-_15081810_15081827	0.0162001	UGCAUUG	NM_022497|MRPS25|64432|mitochondrial ribosomal protein S25	AK298791|MRPS25|64432|mitochondrial ribosomal protein S25
hg18_v1_chr6_-_108386102_108386176	0.0155847	UGCAUUG	NM_007214|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr1_+_40930233_40930276	0.0145568	UGCAUUG	NM_001142590|NFYC|4802|nuclear transcription factor Y, gamma	AK127677|NFYC|4802|nuclear transcription factor Y, gamma
hg18_v1_chr15_-_66285427_66285514	0.0142089	UGCAUUG	CR598967|CALML4|91860|calmodulin-like 4	BX640817|CALML4|91860|calmodulin-like 4	NM_001031733|CALML4|91860|calmodulin-like 4	NM_033429|CALML4|91860|calmodulin-like 4
hg18_v1_chr3_-_143230124_143230196	0.0137795	UGCAUUG	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr2_+_166137091_166137100	0.0136411	UGCAUUG	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr17_-_24645289_24645293	0.0101055	UGCAUUG	AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2
hg18_v1_chr12_+_63958689_63958895	0.00920748	UGCAUUG	NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3	NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3	NM_198080|MSRB3|253827|methionine sulfoxide reductase B3	AK316365|MSRB3|253827|methionine sulfoxide reductase B3	AK293084|MSRB3|253827|methionine sulfoxide reductase B3	AK299065|MSRB3|253827|methionine sulfoxide reductase B3	AY358229|MSRB3|253827|methionine sulfoxide reductase B3	BX648776|MSRB3|253827|methionine sulfoxide reductase B3	AL833622|MSRB3|253827|methionine sulfoxide reductase B3	BC040053|MSRB3|253827|methionine sulfoxide reductase B3
hg18_v1_chr1_+_110328830_110328839	0.00920467	UGCAUUG	AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1	NM_006621|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr9_+_36026900_36026994	0.00752749	UGCAUUG	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	CR593801|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg18_v1_chr10_-_61819493_61819493	0.00544005	UGCAUUG	NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chrX_+_84145487_84145560	0.00542204	UGCAUUG	AK130506|APOOL|139322|apolipoprotein O-like	NM_198450|APOOL|139322|apolipoprotein O-like	AY358193|APOOL|139322|apolipoprotein O-like	BC107096|APOOL|139322|apolipoprotein O-like	CR749250|APOOL|139322|apolipoprotein O-like
hg18_v1_chr17_-_35911340_35911404	0.00475413	UGCAUUG	AF417488|TNS4|84951|tensin 4	AF370421|TNS4|84951|tensin 4	NM_032865|TNS4|84951|tensin 4
hg18_v1_chr18_-_72336133_72336154	0.0041995	UGCAUUG	D86975|ZNF516|9658|zinc finger protein 516	NM_014643|ZNF516|9658|zinc finger protein 516
hg18_v1_chr15_-_59308770_59308809	0.00399979	UGCAUUG	NM_134261|RORA|6095|RAR-related orphan receptor A	U04897|RORA|6095|RAR-related orphan receptor A
hg18_v1_chr13_-_51922731_51922806	0.00301965	UGCAUUG	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg18_v1_chr10_-_75304225_75304426	0.000788367	UGCAUUG	L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	CR618627|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	CR613060|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma
