hg18_v1_chr3_-_124650081_124650081	0.259351	UGUGCGU	NM_183357|ADCY5|111|adenylate cyclase 5
hg18_v1_chr17_-_35017691_35017707	0.253094	UGUGCGU	BC022481|NEUROD2|4761|neurogenic differentiation 2	NM_006160|NEUROD2|4761|neurogenic differentiation 2
hg18_v1_chr22_-_36153449_36153499	0.217898	UGUGCGU	NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg18_v1_chr17_-_72045218_72045376	0.210796	UGUGCGU	AJ315162|CYGB|114757|cytoglobin	AK098057|CYGB|114757|cytoglobin	BC029798|CYGB|114757|cytoglobin	AB057769|CYGB|114757|cytoglobin	CR604289|CYGB|114757|cytoglobin	CR626663|CYGB|114757|cytoglobin	NM_134268|CYGB|114757|cytoglobin
hg18_v1_chr18_+_53253775_53253952	0.209149	UGUGCGU	NM_004852|ONECUT2|9480|one cut homeobox 2	Y18198|ONECUT2|9480|one cut homeobox 2	BC108925|ONECUT2|9480|one cut homeobox 2	BC108926|ONECUT2|9480|one cut homeobox 2
hg18_v1_chr11_-_2116775_2116826	0.209068	UGUGCGU	BC053318|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	NM_000612|IGF2|3481|insulin-like growth factor 2 (somatomedin A)
hg18_v1_chr2_+_120820140_120820394	0.194191	UGUGCGU	BC030029|INHBB|3625|inhibin, beta B	NM_002193|INHBB|3625|inhibin, beta B	DQ890708|INHBB|3625|inhibin, beta B	M31682|INHBB|3625|inhibin, beta B	M13437|INHBB|3625|inhibin, beta B
hg18_v1_chr17_-_8809656_8809757	0.179125	UGUGCGU	AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5
hg18_v1_chr16_-_695719_695914	0.177003	UGUGCGU	BC036680|FBXL16|146330|F-box and leucine-rich repeat protein 16	NM_153350|FBXL16|146330|F-box and leucine-rich repeat protein 16
hg18_v1_chr11_-_2118916_2119159	0.168564	UGUGCGU	NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)
hg18_v1_chr9_+_128416542_128416623	0.163018	UGUGCGU	NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta	NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta	NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta	BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta	BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta	BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta	AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta	BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta	BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta
hg18_v1_chr19_-_2653738_2653746	0.142922	UGUGCGU	NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7
hg18_v1_chr3_-_50515857_50516071	0.13503	UGUGCGU	AJ251367|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	AJ251368|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	AB011130|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	BC152438|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001005505|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174051|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_006030|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	AF040709|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	AF042792|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2	AK310138|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2
hg18_v1_chr19_-_13478037_13478316	0.133448	UGUGCGU	AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
hg18_v1_chr12_+_56230110_56230318	0.125474	UGUGCGU	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg18_v1_chr10_+_102881050_102881287	0.118145	UGUGCGU	BC130530|TLX1|3195|T-cell leukemia homeobox 1	NM_001195517|TLX1|3195|T-cell leukemia homeobox 1	NM_005521|TLX1|3195|T-cell leukemia homeobox 1	S38742|TLX1|3195|T-cell leukemia homeobox 1	M75952|TLX1|3195|T-cell leukemia homeobox 1
hg18_v1_chr19_+_51492136_51492171	0.117298	UGUGCGU	NM_152795|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AF463492|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	BC026308|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AB118749|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AB295039|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AK027725|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	BC080551|HIF3A|64344|hypoxia inducible factor 3, alpha subunit
hg18_v1_chr1_-_181654124_181654359	0.11169	UGUGCGU	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2
hg18_v1_chr19_+_51493486_51493554	0.102338	UGUGCGU	AK297828|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AK304747|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	NM_022462|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AK021421|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AK021653|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AK024095|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	CR612598|HIF3A|64344|hypoxia inducible factor 3, alpha subunit
hg18_v1_chr15_-_91433165_91433550	0.0995148	UGUGCGU	AM392685|RGMA|56963|RGM domain family, member A	BC146682|RGMA|56963|RGM domain family, member A	AK074980|RGMA|56963|RGM domain family, member A	BC140838|RGMA|56963|RGM domain family, member A	BC151132|RGMA|56963|RGM domain family, member A	AL136826|RGMA|56963|RGM domain family, member A	AK074910|RGMA|56963|RGM domain family, member A	NM_020211|RGMA|56963|RGM domain family, member A
hg18_v1_chr8_-_145530639_145530750	0.0988945	UGUGCGU	AY014996|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)	NM_031309|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)
hg18_v1_chr12_+_111980044_111980102	0.0980084	UGUGCGU	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)	BC048216|DTX1|1840|deltex homolog 1 (Drosophila)
hg18_v1_chr11_-_2127368_2127408	0.0896209	UGUGCGU	DQ104203|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	NM_001007139|IGF2|3481|insulin-like growth factor 2 (somatomedin A)
hg18_v1_chr17_-_76064842_76065003	0.0875735	UGUGCGU	EU831771|NPTX1|4884|neuronal pentraxin I	EU831849|NPTX1|4884|neuronal pentraxin I	BC089441|NPTX1|4884|neuronal pentraxin I	U61849|NPTX1|4884|neuronal pentraxin I	AK127335|NPTX1|4884|neuronal pentraxin I	NM_002522|NPTX1|4884|neuronal pentraxin I
hg18_v1_chr3_-_13089547_13089649	0.0816435	UGUGCGU	AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1	NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1
hg18_v1_chr5_+_176170041_176170282	0.075153	UGUGCGU	AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)	NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)	BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)
hg18_v1_chr10_+_11246934_11247016	0.0695194	UGUGCGU	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr1_+_153317887_153318041	0.0672589	UGUGCGU	BC017722|EFNA3|1944|ephrin-A3	NM_004952|EFNA3|1944|ephrin-A3	CR607482|EFNA3|1944|ephrin-A3	BC110406|EFNA3|1944|ephrin-A3	U14187|EFNA3|1944|ephrin-A3	AK296030|EFNA3|1944|ephrin-A3	AK316248|EFNA3|1944|ephrin-A3	L37360|EFNA3|1944|ephrin-A3	DQ891668|EFNA3|1944|ephrin-A3	DQ894854|EFNA3|1944|ephrin-A3
hg18_v1_chr4_+_72423633_72423829	0.065606	UGUGCGU	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr15_-_91417362_91417392	0.0603355	UGUGCGU	AK074966|RGMA|56963|RGM domain family, member A	BC015886|RGMA|56963|RGM domain family, member A	NM_001166286|RGMA|56963|RGM domain family, member A
hg18_v1_chr20_-_3166834_3166834	0.058856	UGUGCGU	AK296508|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11	NM_001174090|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11
hg18_v1_chr1_+_237858995_237858995	0.0556098	UGUGCGU	AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3	NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3
hg18_v1_chr20_-_3166345_3166372	0.0555534	UGUGCGU	BC110540|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11	BC110541|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11	AF336127|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11	NM_032034|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11
hg18_v1_chr13_+_112392355_112392806	0.0437978	UGUGCGU	NM_015205|ATP11A|23250|ATPase, class VI, type 11A	NM_032189|ATP11A|23250|ATPase, class VI, type 11A
hg18_v1_chr10_-_11614279_11614279	0.0433093	UGUGCGU	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr2_+_172658453_172658711	0.0411525	UGUGCGU	AY257976|DLX1|1745|distal-less homeobox 1	NM_001038493|DLX1|1745|distal-less homeobox 1	NM_178120|DLX1|1745|distal-less homeobox 1	AK290503|DLX1|1745|distal-less homeobox 1	AK095266|DLX1|1745|distal-less homeobox 1	BC036189|DLX1|1745|distal-less homeobox 1	BC013010|DLX1|1745|distal-less homeobox 1	AK308842|DLX1|1745|distal-less homeobox 1	BC053351|DLX1|1745|distal-less homeobox 1	EU176288|DLX1|1745|distal-less homeobox 1	EU176603|DLX1|1745|distal-less homeobox 1
hg18_v1_chr19_+_54776398_54776441	0.0409693	UGUGCGU	NM_000951|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2	BC026032|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2
hg18_v1_chr11_-_47502115_47502115	0.0396603	UGUGCGU	AB210019|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172639|CELF1|10658|CUGBP, Elav-like family member 1
hg18_v1_chrX_-_152749190_152749215	0.035424	UGUGCGU	AB103478|PDZD4|57595|PDZ domain containing 4	NM_032512|PDZD4|57595|PDZ domain containing 4	AK127016|PDZD4|57595|PDZ domain containing 4
hg18_v1_chr15_-_91432755_91432755	0.0325958	UGUGCGU	NM_001166287|RGMA|56963|RGM domain family, member A
hg18_v1_chr17_-_8756524_8756558	0.0314244	UGUGCGU	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5
hg18_v1_chr15_-_91417895_91417942	0.0310818	UGUGCGU	AK309814|RGMA|56963|RGM domain family, member A	AK125204|RGMA|56963|RGM domain family, member A	NM_001166288|RGMA|56963|RGM domain family, member A	NM_001166289|RGMA|56963|RGM domain family, member A
hg18_v1_chr3_+_11288975_11289037	0.0267527	UGUGCGU	NM_001136031|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)	NM_001144912|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)	NM_006395|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)
hg18_v1_chr2_-_239987557_239987613	0.02639	UGUGCGU	AB006626|HDAC4|9759|histone deacetylase 4	NM_006037|HDAC4|9759|histone deacetylase 4
hg18_v1_chr13_+_112808102_112808187	0.0227308	UGUGCGU	AK310779|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	AK298404|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	NM_000131|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	NM_019616|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	BC130468|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	M13232|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	AK311682|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	EU557239|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	AK311565|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)
hg18_v1_chr22_+_19651446_19651553	0.0181075	UGUGCGU	NM_001146288|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3	AK094844|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3	AK295581|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3	AK316042|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3
hg18_v1_chr22_+_19649417_19649453	0.0173135	UGUGCGU	NM_001018060|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3	NM_144704|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3	AK055035|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3	BC032485|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3
hg18_v1_chr4_+_996251_996279	0.0163829	UGUGCGU	AJ277437|FGFRL1|53834|fibroblast growth factor receptor-like 1	NM_021923|FGFRL1|53834|fibroblast growth factor receptor-like 1	DQ892417|FGFRL1|53834|fibroblast growth factor receptor-like 1	DQ895631|FGFRL1|53834|fibroblast growth factor receptor-like 1	AK225486|FGFRL1|53834|fibroblast growth factor receptor-like 1
hg18_v1_chr1_-_52228880_52229023	0.0158196	UGUGCGU	M28214|RAB3B|5865|RAB3B, member RAS oncogene family	BC005035|RAB3B|5865|RAB3B, member RAS oncogene family	AK291653|RAB3B|5865|RAB3B, member RAS oncogene family	NM_002867|RAB3B|5865|RAB3B, member RAS oncogene family
hg18_v1_chr10_+_11087259_11087268	0.0144336	UGUGCGU	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr11_-_58736897_58737069	0.00967919	UGUGCGU	BC104997|MPEG1|219972|macrophage expressed 1	BC112230|MPEG1|219972|macrophage expressed 1	AK097881|MPEG1|219972|macrophage expressed 1	AK074166|MPEG1|219972|macrophage expressed 1	NM_001039396|MPEG1|219972|macrophage expressed 1
hg18_v1_chr3_-_57653634_57653924	0.00752886	UGUGCGU	AK074156|FAM116A|201627|family with sequence similarity 116, member A	BC040291|FAM116A|201627|family with sequence similarity 116, member A	NM_152678|FAM116A|201627|family with sequence similarity 116, member A
hg18_v1_chr15_-_91418095_91418219	0.00749588	UGUGCGU	AK299363|RGMA|56963|RGM domain family, member A	NM_001166283|RGMA|56963|RGM domain family, member A
hg18_v1_chr15_-_73535176_73535176	0.00704425	UGUGCGU	AL832463|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)	NM_001145357|SIN3A|25942|SIN3 homolog A, transcription regulator (yeast)
hg18_v1_chr17_+_13913443_13913565	0.00610217	UGUGCGU	NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg18_v1_chr9_+_130839033_130839073	0.00518681	UGUGCGU	AK303036|FAM73B|84895|family with sequence similarity 73, member B	BC009114|FAM73B|84895|family with sequence similarity 73, member B	NM_032809|FAM73B|84895|family with sequence similarity 73, member B
hg18_v1_chr9_+_96176638_96176671	0.00476408	UGUGCGU	NM_032558|HIATL1|84641|hippocampus abundant transcript-like 1
hg18_v1_chr9_+_130684601_130684601	0.00367324	UGUGCGU	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr19_+_51498695_51498764	0.00305117	UGUGCGU	AK314680|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	NM_152794|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	AB054067|HIF3A|64344|hypoxia inducible factor 3, alpha subunit
hg18_v1_chr4_+_72271218_72271956	0.00159685	UGUGCGU	AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr2_-_44440358_44440391	0.000303866	UGUGCGU	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
