hg18_v1_chr18_+_53253775_53253952	4.75056	UGUGCUU	NM_004852|ONECUT2|9480|one cut homeobox 2	Y18198|ONECUT2|9480|one cut homeobox 2	BC108925|ONECUT2|9480|one cut homeobox 2	BC108926|ONECUT2|9480|one cut homeobox 2
hg18_v1_chr2_+_5750229_5750303	4.72352	UGUGCUU	U23752|SOX11|6664|SRY (sex determining region Y)-box 11	AB028641|SOX11|6664|SRY (sex determining region Y)-box 11	NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11	BC025789|SOX11|6664|SRY (sex determining region Y)-box 11
hg18_v1_chr14_-_47213906_47213906	4.51059	UGUGCUU	AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr18_-_6404900_6404931	4.18779	UGUGCUU	BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)	NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)
hg18_v1_chr10_-_7493418_7493462	4.12331	UGUGCUU	BC144327|SFMBT2|57713|Scm-like with four mbt domains 2	AK090887|SFMBT2|57713|Scm-like with four mbt domains 2	NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2
hg18_v1_chr17_+_11085464_11085464	4.03644	UGUGCUU	NM_001173461|SHISA6|388336|shisa homolog 6 (Xenopus laevis)	NM_001173462|SHISA6|388336|shisa homolog 6 (Xenopus laevis)	NM_207386|SHISA6|388336|shisa homolog 6 (Xenopus laevis)
hg18_v1_chr16_-_60627536_60627536	4.01283	UGUGCUU	AB035305|CDH8|1006|cadherin 8, type 2	NM_001796|CDH8|1006|cadherin 8, type 2
hg18_v1_chr4_-_66218247_66218247	3.9421	UGUGCUU	AK307826|EPHA5|2044|EPH receptor A5	NM_004439|EPHA5|2044|EPH receptor A5	NM_182472|EPHA5|2044|EPH receptor A5
hg18_v1_chr18_-_42590989_42591129	3.84979	UGUGCUU	AK094273|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	NM_013305|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	AK056270|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
hg18_v1_chr10_-_7491204_7491308	3.80034	UGUGCUU	AB046837|SFMBT2|57713|Scm-like with four mbt domains 2	BC152430|SFMBT2|57713|Scm-like with four mbt domains 2	NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2
hg18_v1_chr12_+_20413445_20413485	3.72252	UGUGCUU	BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited
hg18_v1_chr10_-_118021532_118021808	3.66682	UGUGCUU	DQ892210|GFRA1|2674|GDNF family receptor alpha 1	DQ895406|GFRA1|2674|GDNF family receptor alpha 1	AF042080|GFRA1|2674|GDNF family receptor alpha 1	U95847|GFRA1|2674|GDNF family receptor alpha 1	U97144|GFRA1|2674|GDNF family receptor alpha 1	BC014962|GFRA1|2674|GDNF family receptor alpha 1	NM_145793|GFRA1|2674|GDNF family receptor alpha 1
hg18_v1_chr3_-_193609531_193609544	3.45813	UGUGCUU	AK125307|FGF12|2257|fibroblast growth factor 12	NM_021032|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr10_+_115793795_115793804	3.453	UGUGCUU	NM_000684|ADRB1|153|adrenergic, beta-1-, receptor	J03019|ADRB1|153|adrenergic, beta-1-, receptor
hg18_v1_chr14_+_91859904_91859954	3.36122	UGUGCUU	NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg18_v1_chr18_+_65219114_65219306	3.34993	UGUGCUU	NM_152721|DOK6|220164|docking protein 6	AY599248|DOK6|220164|docking protein 6	BC096744|DOK6|220164|docking protein 6
hg18_v1_chr11_-_35397675_35397683	3.34714	UGUGCUU	NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg18_v1_chr18_-_11138760_11138760	3.34068	UGUGCUU	NM_022068|FAM38B|63895|family with sequence similarity 38, member B
hg18_v1_chr11_-_100959868_100959868	3.20178	UGUGCUU	AJ006276|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6	NM_004621|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6
hg18_v1_chr12_+_76749199_76749327	3.18609	UGUGCUU	NM_014903|NAV3|89795|neuron navigator 3	AJ488201|NAV3|89795|neuron navigator 3
hg18_v1_chr6_-_94185780_94186028	3.17858	UGUGCUU	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg18_v1_chr12_+_4889309_4889333	3.1446	UGUGCUU	NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)
hg18_v1_chr10_-_118022965_118023151	3.13203	UGUGCUU	AF038421|GFRA1|2674|GDNF family receptor alpha 1	NM_005264|GFRA1|2674|GDNF family receptor alpha 1
hg18_v1_chr4_+_158361185_158361484	3.10935	UGUGCUU	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg18_v1_chr7_-_103417198_103417266	3.07804	UGUGCUU	NM_005045|RELN|5649|reelin	NM_173054|RELN|5649|reelin	U79716|RELN|5649|reelin	AK293863|RELN|5649|reelin
hg18_v1_chr2_+_154436670_154436711	3.04839	UGUGCUU	NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)	AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)
hg18_v1_chr5_-_160907702_160907718	3.03666	UGUGCUU	BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	CR621869|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2
hg18_v1_chr1_-_21868380_21868460	3.00077	UGUGCUU	AB007943|RAP1GAP|5909|RAP1 GTPase activating protein	M64788|RAP1GAP|5909|RAP1 GTPase activating protein	NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein	NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein
hg18_v1_chr18_+_13208777_13208794	2.98829	UGUGCUU	NM_181481|C18orf1|753|chromosome 18 open reading frame 1	NM_181482|C18orf1|753|chromosome 18 open reading frame 1	BC030199|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr6_+_72979234_72979316	2.89982	UGUGCUU	AK294868|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168407|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168408|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK311105|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK295001|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr2_-_200044233_200044233	2.88713	UGUGCUU	AK291463|SATB2|23314|SATB homeobox 2	NM_015265|SATB2|23314|SATB homeobox 2
hg18_v1_chr10_-_131652007_131652080	2.86984	UGUGCUU	AL832828|EBF3|253738|early B-cell factor 3	BC126130|EBF3|253738|early B-cell factor 3	BC130479|EBF3|253738|early B-cell factor 3	NM_001005463|EBF3|253738|early B-cell factor 3
hg18_v1_chr3_+_125786195_125786241	2.86339	UGUGCUU	NM_007064|KALRN|8997|kalirin, RhoGEF kinase	BC058015|KALRN|8997|kalirin, RhoGEF kinase	AB011422|KALRN|8997|kalirin, RhoGEF kinase
hg18_v1_chr4_-_108176901_108176902	2.85352	UGUGCUU	NM_014421|DKK2|27123|dickkopf homolog 2 (Xenopus laevis)	AF177395|DKK2|27123|dickkopf homolog 2 (Xenopus laevis)
hg18_v1_chr7_+_153380673_153380709	2.8512	UGUGCUU	M96859|DPP6|1804|dipeptidyl-peptidase 6	NM_130797|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr14_+_91859289_91859289	2.84052	UGUGCUU	AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg18_v1_chr3_+_213535_213649	2.81262	UGUGCUU	AF002246|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg18_v1_chr19_-_2672337_2672411	2.80045	UGUGCUU	BC030660|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	NM_145173|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1
hg18_v1_chr3_-_79899748_79899748	2.78844	UGUGCUU	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg18_v1_chr3_+_11009419_11009423	2.76729	UGUGCUU	NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
hg18_v1_chr7_+_50314801_50314998	2.72515	UGUGCUU	BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)
hg18_v1_chr5_-_41546384_41546486	2.71104	UGUGCUU	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg18_v1_chr11_-_35398077_35398185	2.69297	UGUGCUU	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg18_v1_chr15_+_72208751_72208767	2.6556	UGUGCUU	AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2
hg18_v1_chr2_+_95326753_95326913	2.64638	UGUGCUU	NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin
hg18_v1_chr17_+_50697319_50697343	2.63486	UGUGCUU	NM_002126|HLF|3131|hepatic leukemia factor
hg18_v1_chr10_-_118022707_118022785	2.5962	UGUGCUU	AK292886|GFRA1|2674|GDNF family receptor alpha 1	NM_001145453|GFRA1|2674|GDNF family receptor alpha 1
hg18_v1_chr8_-_114518194_114518417	2.58901	UGUGCUU	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3	AY210419|CSMD3|114788|CUB and Sushi multiple domains 3	BC140003|CSMD3|114788|CUB and Sushi multiple domains 3	AB114604|CSMD3|114788|CUB and Sushi multiple domains 3	NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3	NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3
hg18_v1_chr5_-_76970264_76970277	2.5804	UGUGCUU	BC001800|OTP|23440|orthopedia homeobox	NM_032109|OTP|23440|orthopedia homeobox
hg18_v1_chr5_-_11956964_11957109	2.52458	UGUGCUU	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg18_v1_chr6_+_72653369_72653379	2.51492	UGUGCUU	BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1	BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr11_-_70185559_70185573	2.49576	UGUGCUU	AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr1_-_21850874_21850994	2.48342	UGUGCUU	BC054490|RAP1GAP|5909|RAP1 GTPase activating protein	NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein
hg18_v1_chr1_-_148155986_148156070	2.47817	UGUGCUU	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg18_v1_chrX_-_74062005_74062044	2.47366	UGUGCUU	AK307471|KIAA2022|340533|KIAA2022	NM_001008537|KIAA2022|340533|KIAA2022	AB095942|KIAA2022|340533|KIAA2022	BC152557|KIAA2022|340533|KIAA2022
hg18_v1_chr15_+_72209795_72209969	2.45256	UGUGCUU	NM_020851|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	AK290467|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	AK092297|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2
hg18_v1_chr6_+_118335381_118335386	2.44784	UGUGCUU	BC028615|SLC35F1|222553|solute carrier family 35, member F1	NM_001029858|SLC35F1|222553|solute carrier family 35, member F1	BC114925|SLC35F1|222553|solute carrier family 35, member F1
hg18_v1_chr18_+_13601664_13601664	2.42761	UGUGCUU	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1	NM_001003675|C18orf1|753|chromosome 18 open reading frame 1
hg18_v1_chr2_-_73350103_73350265	2.42533	UGUGCUU	AB075820|FBXO41|150726|F-box protein 41	NM_001080410|FBXO41|150726|F-box protein 41
hg18_v1_chr1_-_37272295_37272430	2.38906	UGUGCUU	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3	U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3	AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3	NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3
hg18_v1_chr1_-_188713324_188713393	2.38267	UGUGCUU	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg18_v1_chr2_-_200038055_200038075	2.37229	UGUGCUU	AB209376|SATB2|23314|SATB homeobox 2	NM_001172517|SATB2|23314|SATB homeobox 2
hg18_v1_chr16_-_67039874_67040091	2.33632	UGUGCUU	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg18_v1_chr10_-_128884411_128884411	2.33063	UGUGCUU	AK127465|FAM196A|642938|family with sequence similarity 196, member A	NM_001039762|FAM196A|642938|family with sequence similarity 196, member A
hg18_v1_chr15_+_30797466_30797633	2.32438	UGUGCUU	AK095741|GREM1|26585|gremlin 1	AK095890|GREM1|26585|gremlin 1	AK095972|GREM1|26585|gremlin 1	AK312265|GREM1|26585|gremlin 1	NM_001191322|GREM1|26585|gremlin 1	NM_001191323|GREM1|26585|gremlin 1	NM_013372|GREM1|26585|gremlin 1	AY232290|GREM1|26585|gremlin 1	AF110137|GREM1|26585|gremlin 1	BC093778|GREM1|26585|gremlin 1	BC101611|GREM1|26585|gremlin 1
hg18_v1_chr3_+_3816079_3816120	2.32179	UGUGCUU	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1
hg18_v1_chr11_-_106394039_106394557	2.30186	UGUGCUU	BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2	BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2	BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2	NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2	X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2	Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2
hg18_v1_chr13_-_52320774_52320779	2.28269	UGUGCUU	AF061573|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8
hg18_v1_chr16_-_51138306_51138306	2.26526	UGUGCUU	NM_001080430|TOX3|27324|TOX high mobility group box family member 3
hg18_v1_chr8_-_41873401_41873534	2.24547	UGUGCUU	AB209418|ANK1|286|ankyrin 1, erythrocytic	NM_001142446|ANK1|286|ankyrin 1, erythrocytic
hg18_v1_chr7_-_78920806_78920825	2.23205	UGUGCUU	AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2	NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg18_v1_chr8_-_15140162_15140162	2.23143	UGUGCUU	NM_139167|SGCZ|137868|sarcoglycan, zeta
hg18_v1_chr10_+_102495327_102495457	2.23111	UGUGCUU	L25597|PAX2|5076|paired box 2	M89470|PAX2|5076|paired box 2	NM_000278|PAX2|5076|paired box 2	NM_003987|PAX2|5076|paired box 2	NM_003988|PAX2|5076|paired box 2	NM_003989|PAX2|5076|paired box 2	NM_003990|PAX2|5076|paired box 2
hg18_v1_chr12_+_93066370_93066900	2.22568	UGUGCUU	AF030339|PLXNC1|10154|plexin C1	NM_005761|PLXNC1|10154|plexin C1	BC029934|PLXNC1|10154|plexin C1
hg18_v1_chr20_-_4752067_4752321	2.21749	UGUGCUU	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr11_-_84312085_84312112	2.18895	UGUGCUU	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)	AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr19_-_14177980_14178116	2.18284	UGUGCUU	AF307079|LPHN1|22859|latrophilin 1	AB020628|LPHN1|22859|latrophilin 1	NM_001008701|LPHN1|22859|latrophilin 1	NM_014921|LPHN1|22859|latrophilin 1
hg18_v1_chr5_-_115938305_115938522	2.17518	UGUGCUU	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg18_v1_chr20_-_42872295_42872325	2.15679	UGUGCUU	AK126807|RIMS4|140730|regulating synaptic membrane exocytosis 4	BC104191|RIMS4|140730|regulating synaptic membrane exocytosis 4	BC104190|RIMS4|140730|regulating synaptic membrane exocytosis 4	BC112985|RIMS4|140730|regulating synaptic membrane exocytosis 4	AY326954|RIMS4|140730|regulating synaptic membrane exocytosis 4	NM_182970|RIMS4|140730|regulating synaptic membrane exocytosis 4
hg18_v1_chr2_-_50428395_50428457	2.14863	UGUGCUU	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg18_v1_chr19_+_11510578_11510740	2.09704	UGUGCUU	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	CR620483|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle	CR615873|CNN1|1264|calponin 1, basic, smooth muscle
hg18_v1_chr16_-_2186465_2186523	2.09648	UGUGCUU	NM_020764|CASKIN1|57524|CASK interacting protein 1	AF451977|CASKIN1|57524|CASK interacting protein 1
hg18_v1_chr17_-_34015631_34015814	2.07867	UGUGCUU	AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1	NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1
hg18_v1_chr22_-_37878394_37878632	2.06334	UGUGCUU	DQ064603|CBX7|23492|chromobox homolog 7	EU446785|CBX7|23492|chromobox homolog 7	BC051773|CBX7|23492|chromobox homolog 7	NM_175709|CBX7|23492|chromobox homolog 7
hg18_v1_chr20_-_41251878_41251970	2.06053	UGUGCUU	AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T	BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T	AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T	NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T	NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T
hg18_v1_chrX_+_12066505_12066518	2.04645	UGUGCUU	AB002314|FRMPD4|9758|FERM and PDZ domain containing 4	NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4	AK289694|FRMPD4|9758|FERM and PDZ domain containing 4
hg18_v1_chr19_+_19183763_19183837	2.04177	UGUGCUU	NM_004386|NCAN|1463|neurocan	AB210004|NCAN|1463|neurocan
hg18_v1_chr6_+_72983183_72983183	2.00369	UGUGCUU	AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr15_+_72209642_72209642	1.99051	UGUGCUU	NM_001130138|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2
hg18_v1_chr6_+_72982865_72982865	1.96912	UGUGCUU	AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr1_+_41022066_41022270	1.96622	UGUGCUU	AF105202|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4	NM_004700|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4	NM_172163|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4
hg18_v1_chr15_+_72209039_72209052	1.96444	UGUGCUU	NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2
hg18_v1_chr5_+_76542461_76542631	1.95711	UGUGCUU	AF079529|PDE8B|8622|phosphodiesterase 8B	AY129948|PDE8B|8622|phosphodiesterase 8B	AY129949|PDE8B|8622|phosphodiesterase 8B	NM_001029851|PDE8B|8622|phosphodiesterase 8B	NM_001029852|PDE8B|8622|phosphodiesterase 8B	NM_001029853|PDE8B|8622|phosphodiesterase 8B	NM_001029854|PDE8B|8622|phosphodiesterase 8B	NM_003719|PDE8B|8622|phosphodiesterase 8B	AB085824|PDE8B|8622|phosphodiesterase 8B	AB085825|PDE8B|8622|phosphodiesterase 8B	AB085826|PDE8B|8622|phosphodiesterase 8B	AB085827|PDE8B|8622|phosphodiesterase 8B	AL831924|PDE8B|8622|phosphodiesterase 8B
hg18_v1_chr17_+_14145051_14145290	1.95107	UGUGCUU	AK023723|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	BC063301|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	AF105377|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	NM_006041|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	BC069664|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	BC069725|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
hg18_v1_chr11_-_83071084_83071115	1.93173	UGUGCUU	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)	CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr6_+_146390474_146390610	1.92758	UGUGCUU	AK308550|GRM1|2911|glutamate receptor, metabotropic 1	NM_000838|GRM1|2911|glutamate receptor, metabotropic 1	NM_001114329|GRM1|2911|glutamate receptor, metabotropic 1	L76631|GRM1|2911|glutamate receptor, metabotropic 1
hg18_v1_chr6_+_96570565_96570612	1.9182	UGUGCUU	NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg18_v1_chr4_-_154929657_154929692	1.90452	UGUGCUU	BC008666|SFRP2|6423|secreted frizzled-related protein 2	AK075372|SFRP2|6423|secreted frizzled-related protein 2	AK093922|SFRP2|6423|secreted frizzled-related protein 2	AF311912|SFRP2|6423|secreted frizzled-related protein 2	NM_003013|SFRP2|6423|secreted frizzled-related protein 2
hg18_v1_chr18_+_48120539_48120539	1.89097	UGUGCUU	NM_005215|DCC|1630|deleted in colorectal carcinoma
hg18_v1_chr15_+_77511912_77511916	1.88972	UGUGCUU	AB028947|KIAA1024|23251|KIAA1024	NM_015206|KIAA1024|23251|KIAA1024	BC152466|KIAA1024|23251|KIAA1024
hg18_v1_chr5_+_139155569_139155612	1.88415	UGUGCUU	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2	NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2	BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2
hg18_v1_chr3_-_186353421_186353563	1.88243	UGUGCUU	NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70
hg18_v1_chr17_-_43862480_43862594	1.87054	UGUGCUU	Y11215|SKAP1|8631|src kinase associated phosphoprotein 1	BC047870|SKAP1|8631|src kinase associated phosphoprotein 1	AK290818|SKAP1|8631|src kinase associated phosphoprotein 1	NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1	NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1
hg18_v1_chrX_-_64171317_64171407	1.85046	UGUGCUU	AK022807|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178032|ZC4H2|55906|zinc finger, C4H2 domain containing
hg18_v1_chr19_+_38804694_38804856	1.83671	UGUGCUU	NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	CR622600|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
hg18_v1_chr2_-_51113040_51113177	1.83295	UGUGCUU	EF539882|NRXN1|9378|neurexin 1	AK124726|NRXN1|9378|neurexin 1	NM_001135659|NRXN1|9378|neurexin 1	NM_004801|NRXN1|9378|neurexin 1
hg18_v1_chr4_+_2031036_2031036	1.83098	UGUGCUU	NM_178557|NAT8L|339983|N-acetyltransferase 8-like (GCN5-related, putative)
hg18_v1_chr2_+_176689737_176689807	1.80773	UGUGCUU	NM_002148|HOXD10|3236|homeobox D10	BC069619|HOXD10|3236|homeobox D10	BC074760|HOXD10|3236|homeobox D10	X59373|HOXD10|3236|homeobox D10	EU446483|HOXD10|3236|homeobox D10
hg18_v1_chr7_+_153215316_153215351	1.80676	UGUGCUU	BX647966|DPP6|1804|dipeptidyl-peptidase 6	NM_001039350|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr3_+_77171938_77172003	1.77442	UGUGCUU	DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)	NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)
hg18_v1_chr2_-_213111525_213111596	1.77354	UGUGCUU	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg18_v1_chr11_-_45264193_45264459	1.7669	UGUGCUU	AK308841|SYT13|57586|synaptotagmin XIII	AM393283|SYT13|57586|synaptotagmin XIII	CR592126|SYT13|57586|synaptotagmin XIII	BC093830|SYT13|57586|synaptotagmin XIII	AK291009|SYT13|57586|synaptotagmin XIII	BC093832|SYT13|57586|synaptotagmin XIII	AL512743|SYT13|57586|synaptotagmin XIII	AB037848|SYT13|57586|synaptotagmin XIII	NM_020826|SYT13|57586|synaptotagmin XIII
hg18_v1_chr11_-_8147111_8147168	1.76661	UGUGCUU	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg18_v1_chr4_-_10068055_10068162	1.76273	UGUGCUU	CR605217|ZNF518B|85460|zinc finger protein 518B	BC067880|ZNF518B|85460|zinc finger protein 518B	BC040874|ZNF518B|85460|zinc finger protein 518B	NM_053042|ZNF518B|85460|zinc finger protein 518B
hg18_v1_chrX_+_51091822_51091822	1.75787	UGUGCUU	AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10	NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10
hg18_v1_chr7_-_36991189_36991189	1.75462	UGUGCUU	BC064635|ELMO1|9844|engulfment and cell motility 1	NM_001039459|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr14_+_91858677_91858677	1.74938	UGUGCUU	AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg18_v1_chr11_+_104986009_104986190	1.7448	UGUGCUU	NM_000829|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4	NM_001077243|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4	NM_001077244|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4	BC045546|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4	BC142654|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4	BC150209|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4	BC035610|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4
hg18_v1_chr11_+_108798047_108798060	1.74354	UGUGCUU	AK303693|C11orf87|399947|chromosome 11 open reading frame 87	NM_207645|C11orf87|399947|chromosome 11 open reading frame 87
hg18_v1_chr2_-_144994349_144994434	1.7435	UGUGCUU	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2	AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2	BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2	NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2
hg18_v1_chr21_+_18539016_18539050	1.74255	UGUGCUU	AF257472|CHODL|140578|chondrolectin	NM_024944|CHODL|140578|chondrolectin	AY358608|CHODL|140578|chondrolectin	BC009418|CHODL|140578|chondrolectin
hg18_v1_chr15_-_71448657_71448657	1.71682	UGUGCUU	AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg18_v1_chr16_-_51139214_51139214	1.68047	UGUGCUU	AK299202|TOX3|27324|TOX high mobility group box family member 3	NM_001146188|TOX3|27324|TOX high mobility group box family member 3
hg18_v1_chr8_-_93177057_93177057	1.65757	UGUGCUU	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr12_-_16650697_16650731	1.6434	UGUGCUU	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	CR598247|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr20_-_604822_604822	1.63629	UGUGCUU	AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)	NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)
hg18_v1_chr13_+_34414390_34414527	1.62727	UGUGCUU	NM_015678|NBEA|26960|neurobeachin	AF467288|NBEA|26960|neurobeachin
hg18_v1_chr7_-_71440143_71440338	1.62007	UGUGCUU	NM_001017440|CALN1|83698|calneuron 1
hg18_v1_chr13_+_77170470_77170470	1.60499	UGUGCUU	NM_001040153|SLAIN1|122060|SLAIN motif family, member 1
hg18_v1_chr11_-_77730573_77730573	1.59227	UGUGCUU	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg18_v1_chr9_-_90983501_90983559	1.58883	UGUGCUU	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg18_v1_chr6_+_69401660_69402585	1.56953	UGUGCUU	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3	AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3	AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3
hg18_v1_chr13_+_77213295_77213519	1.56295	UGUGCUU	NM_144595|SLAIN1|122060|SLAIN motif family, member 1	AL834203|SLAIN1|122060|SLAIN motif family, member 1	AK289600|SLAIN1|122060|SLAIN motif family, member 1	BC045177|SLAIN1|122060|SLAIN motif family, member 1	AK289714|SLAIN1|122060|SLAIN motif family, member 1	AK295423|SLAIN1|122060|SLAIN motif family, member 1
hg18_v1_chrX_-_83329562_83329695	1.55016	UGUGCUU	CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg18_v1_chr18_-_33399997_33399997	1.54108	UGUGCUU	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4	NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4	NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4	NM_020180|CELF4|56853|CUGBP, Elav-like family member 4
hg18_v1_chr18_-_24011349_24011442	1.54004	UGUGCUU	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr1_-_199259447_199259462	1.51955	UGUGCUU	AB007918|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg18_v1_chr11_+_65815940_65815961	1.51295	UGUGCUU	NM_153266|TMEM151A|256472|transmembrane protein 151A
hg18_v1_chr11_+_8059267_8059484	1.51165	UGUGCUU	NM_177972|TUB|7275|tubby homolog (mouse)	U54644|TUB|7275|tubby homolog (mouse)
hg18_v1_chr10_+_118990573_118990708	1.51003	UGUGCUU	NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2	BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2
hg18_v1_chr3_+_49566901_49566940	1.50789	UGUGCUU	AF052224|BSN|8927|bassoon (presynaptic cytomatrix protein)	NM_003458|BSN|8927|bassoon (presynaptic cytomatrix protein)
hg18_v1_chr19_-_60646041_60646041	1.50206	UGUGCUU	NM_001145176|SHISA7|729956|shisa homolog 7 (Xenopus laevis)
hg18_v1_chr22_+_24290738_24290860	1.49835	UGUGCUU	CR617875|ADRBK2|157|adrenergic, beta, receptor kinase 2	BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2	NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2
hg18_v1_chr1_+_110494654_110494661	1.46172	UGUGCUU	NM_001010898|SLC6A17|388662|solute carrier family 6, member 17	AK289982|SLC6A17|388662|solute carrier family 6, member 17
hg18_v1_chr1_+_145479805_145479946	1.45807	UGUGCUU	NM_004326|BCL9|607|B-cell CLL/lymphoma 9	Y13620|BCL9|607|B-cell CLL/lymphoma 9
hg18_v1_chr9_+_137733851_137733879	1.44426	UGUGCUU	AK127272|KCNT1|57582|potassium channel, subfamily T, member 1	NM_020822|KCNT1|57582|potassium channel, subfamily T, member 1	AB037843|KCNT1|57582|potassium channel, subfamily T, member 1	BC136618|KCNT1|57582|potassium channel, subfamily T, member 1	BC144304|KCNT1|57582|potassium channel, subfamily T, member 1	BC171770|KCNT1|57582|potassium channel, subfamily T, member 1
hg18_v1_chr1_+_99502435_99502641	1.43387	UGUGCUU	AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4
hg18_v1_chr8_-_70909754_70909852	1.43296	UGUGCUU	AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr2_+_190723216_190723216	1.4262	UGUGCUU	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr1_-_153109349_153109391	1.42351	UGUGCUU	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr1_+_229365296_229365338	1.40667	UGUGCUU	AK126782|TRIM67|440730|tripartite motif containing 67	NM_001004342|TRIM67|440730|tripartite motif containing 67	AY253917|TRIM67|440730|tripartite motif containing 67
hg18_v1_chr6_+_73388291_73388291	1.39836	UGUGCUU	NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5	NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5	NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5	NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5	NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5
hg18_v1_chr10_+_52504239_52504355	1.39364	UGUGCUU	NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I	AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I	EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I	BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I	Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I	BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I	GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I	GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg18_v1_chr9_+_111442888_111442892	1.38405	UGUGCUU	BC039306|PALM2|114299|paralemmin 2	NM_001037293|PALM2|114299|paralemmin 2	AK095003|PALM2|114299|paralemmin 2
hg18_v1_chr8_-_145530639_145530750	1.3759	UGUGCUU	AY014996|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)	NM_031309|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)
hg18_v1_chr3_-_193928038_193928081	1.37528	UGUGCUU	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr1_-_119333701_119333701	1.36941	UGUGCUU	AK127536|TBX15|6913|T-box 15	NM_152380|TBX15|6913|T-box 15
hg18_v1_chr11_+_91724909_91724909	1.36926	UGUGCUU	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg18_v1_chr11_+_74629597_74629597	1.35686	UGUGCUU	NM_001195528|LOC441617|441617|hypothetical LOC441617
hg18_v1_chr17_+_32368611_32368611	1.35282	UGUGCUU	NM_005568|LHX1|3975|LIM homeobox 1
hg18_v1_chr12_-_23993830_23993908	1.33995	UGUGCUU	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr4_-_164473107_164473208	1.33422	UGUGCUU	BC071720|NPY1R|4886|neuropeptide Y receptor Y1	M88461|NPY1R|4886|neuropeptide Y receptor Y1	AK296624|NPY1R|4886|neuropeptide Y receptor Y1	BC036657|NPY1R|4886|neuropeptide Y receptor Y1	NM_000909|NPY1R|4886|neuropeptide Y receptor Y1	AK298282|NPY1R|4886|neuropeptide Y receptor Y1	AK312578|NPY1R|4886|neuropeptide Y receptor Y1
hg18_v1_chr5_-_35266550_35266550	1.30334	UGUGCUU	NM_000949|PRLR|5618|prolactin receptor
hg18_v1_chr7_+_97199206_97199370	1.29998	UGUGCUU	NM_003182|TAC1|6863|tachykinin, precursor 1	NM_013996|TAC1|6863|tachykinin, precursor 1	NM_013997|TAC1|6863|tachykinin, precursor 1	NM_013998|TAC1|6863|tachykinin, precursor 1	U37529|TAC1|6863|tachykinin, precursor 1	AK222957|TAC1|6863|tachykinin, precursor 1	BC018047|TAC1|6863|tachykinin, precursor 1	X54469|TAC1|6863|tachykinin, precursor 1
hg18_v1_chr15_-_24570010_24570027	1.29986	UGUGCUU	AK315311|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_021912|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg18_v1_chr5_-_158459276_158459365	1.2945	UGUGCUU	BC041178|EBF1|1879|early B-cell factor 1	AK289712|EBF1|1879|early B-cell factor 1	BC038805|EBF1|1879|early B-cell factor 1	NM_024007|EBF1|1879|early B-cell factor 1
hg18_v1_chr16_+_57056265_57056265	1.28298	UGUGCUU	NM_022910|NDRG4|65009|NDRG family member 4
hg18_v1_chr8_-_93176618_93176665	1.24481	UGUGCUU	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr3_-_53055078_53055128	1.24416	UGUGCUU	AK313965|SFMBT1|51460|Scm-like with four mbt domains 1	NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1	NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1
hg18_v1_chr19_-_17660005_17660191	1.24312	UGUGCUU	AB028955|UNC13A|23025|unc-13 homolog A (C. elegans)	NM_001080421|UNC13A|23025|unc-13 homolog A (C. elegans)
hg18_v1_chr14_-_73296643_73296793	1.23672	UGUGCUU	AK127785|C14orf43|91748|chromosome 14 open reading frame 43	NM_194278|C14orf43|91748|chromosome 14 open reading frame 43
hg18_v1_chr8_-_93184629_93184633	1.22713	UGUGCUU	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr2_-_152663748_152663838	1.22696	UGUGCUU	AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr2_+_120820140_120820394	1.2244	UGUGCUU	BC030029|INHBB|3625|inhibin, beta B	NM_002193|INHBB|3625|inhibin, beta B	DQ890708|INHBB|3625|inhibin, beta B	M31682|INHBB|3625|inhibin, beta B	M13437|INHBB|3625|inhibin, beta B
hg18_v1_chr13_-_99422163_99422178	1.2074	UGUGCUU	AF378304|ZIC5|85416|Zic family member 5 (odd-paired homolog, Drosophila)	NM_033132|ZIC5|85416|Zic family member 5 (odd-paired homolog, Drosophila)
hg18_v1_chr2_-_200030944_200031068	1.20682	UGUGCUU	AK056638|SATB2|23314|SATB homeobox 2	NM_001172509|SATB2|23314|SATB homeobox 2
hg18_v1_chr6_+_101953581_101953671	1.20049	UGUGCUU	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2
hg18_v1_chr14_-_56346849_56346936	1.19708	UGUGCUU	AK314271|OTX2|5015|orthodenticle homeobox 2	BC032579|OTX2|5015|orthodenticle homeobox 2	NM_021728|OTX2|5015|orthodenticle homeobox 2
hg18_v1_chr13_-_35603513_35603520	1.188	UGUGCUU	NM_004734|DCLK1|9201|doublecortin-like kinase 1
hg18_v1_chr12_+_70952729_70952813	1.18198	UGUGCUU	AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme
hg18_v1_chr12_-_16652202_16652290	1.17279	UGUGCUU	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr12_-_24946495_24946588	1.17096	UGUGCUU	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr11_+_22316242_22316242	1.1694	UGUGCUU	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg18_v1_chr10_+_52420936_52420957	1.16578	UGUGCUU	AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg18_v1_chr5_-_88215034_88215049	1.15545	UGUGCUU	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr2_+_231437745_231437864	1.15252	UGUGCUU	NM_001012514|ITM2C|81618|integral membrane protein 2C	NM_001012516|ITM2C|81618|integral membrane protein 2C	NM_030926|ITM2C|81618|integral membrane protein 2C
hg18_v1_chr3_+_23961739_23961899	1.14752	UGUGCUU	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr8_-_93181091_93181091	1.10379	UGUGCUU	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr15_-_24569309_24569330	1.10346	UGUGCUU	NM_000814|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg18_v1_chr11_-_31796061_31796086	1.10298	UGUGCUU	AK314470|PAX6|5080|paired box 6	NM_001127612|PAX6|5080|paired box 6
hg18_v1_chr9_-_92444886_92444992	1.10224	UGUGCUU	BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2
hg18_v1_chr1_-_177378801_177378846	1.1021	UGUGCUU	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chrX_+_56606686_56606866	1.09814	UGUGCUU	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg18_v1_chr7_-_11838260_11838369	1.08685	UGUGCUU	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr11_-_16380967_16380988	1.08366	UGUGCUU	AL136780|SOX6|55553|SRY (sex determining region Y)-box 6	AK310506|SOX6|55553|SRY (sex determining region Y)-box 6	BC047064|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6	NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr13_+_95541093_95541093	1.07985	UGUGCUU	AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3	NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3
hg18_v1_chr12_-_69600780_69600850	1.06954	UGUGCUU	D64053|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_002849|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr7_+_140420500_140420500	1.06698	UGUGCUU	NM_001195278|LOC100131199|100131199|transmembrane protein 178-like
hg18_v1_chr3_+_85090721_85090917	1.05958	UGUGCUU	BC105999|CADM2|253559|cell adhesion molecule 2	NM_001167674|CADM2|253559|cell adhesion molecule 2	NM_001167675|CADM2|253559|cell adhesion molecule 2	AK295885|CADM2|253559|cell adhesion molecule 2	AL834270|CADM2|253559|cell adhesion molecule 2
hg18_v1_chr19_-_45888259_45888407	1.04179	UGUGCUU	BC016160|NUMBL|9253|numb homolog (Drosophila)-like	BC144583|NUMBL|9253|numb homolog (Drosophila)-like	AK289398|NUMBL|9253|numb homolog (Drosophila)-like	NM_004756|NUMBL|9253|numb homolog (Drosophila)-like
hg18_v1_chr14_-_56342097_56342097	1.03763	UGUGCUU	NM_172337|OTX2|5015|orthodenticle homeobox 2
hg18_v1_chr8_-_133562185_133562334	1.0321	UGUGCUU	NM_004519|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3
hg18_v1_chr19_-_43412152_43412160	1.02915	UGUGCUU	BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1	CR604718|DPF1|8193|D4, zinc and double PHD fingers family 1	NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1
hg18_v1_chr3_-_181237210_181237631	1.02726	UGUGCUU	AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like	NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like	AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like	AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like	AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like	AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like	BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like
hg18_v1_chr17_-_77478835_77478893	1.00996	UGUGCUU	AF059195|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)	NM_002359|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)
hg18_v1_chr8_+_38704860_38704860	0.979413	UGUGCUU	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr14_+_74964672_74964860	0.972325	UGUGCUU	NM_001135048|JDP2|122953|Jun dimerization protein 2	BC068196|JDP2|122953|Jun dimerization protein 2	NM_130469|JDP2|122953|Jun dimerization protein 2
hg18_v1_chr8_-_25958291_25958308	0.971634	UGUGCUU	NM_022659|EBF2|64641|early B-cell factor 2
hg18_v1_chrX_-_110542040_110542115	0.967707	UGUGCUU	AF040254|DCX|1641|doublecortin	AF040255|DCX|1641|doublecortin	BC027925|DCX|1641|doublecortin	AK290455|DCX|1641|doublecortin	AK299822|DCX|1641|doublecortin	NM_178151|DCX|1641|doublecortin	NM_001195553|DCX|1641|doublecortin	NM_178152|DCX|1641|doublecortin	NM_178153|DCX|1641|doublecortin
hg18_v1_chr7_+_119700924_119700957	0.965451	UGUGCUU	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2
hg18_v1_chr4_+_55218663_55219119	0.957647	UGUGCUU	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg18_v1_chr16_+_57055494_57055494	0.955612	UGUGCUU	NM_001130487|NDRG4|65009|NDRG family member 4
hg18_v1_chr8_+_38763878_38763881	0.934382	UGUGCUU	AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg18_v1_chr14_+_74968589_74968589	0.934215	UGUGCUU	BC051303|JDP2|122953|Jun dimerization protein 2	NM_001135049|JDP2|122953|Jun dimerization protein 2
hg18_v1_chr11_-_10671608_10671704	0.929044	UGUGCUU	AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog	AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog	BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr11_-_83661878_83661970	0.927129	UGUGCUU	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr22_+_23532135_23532285	0.917182	UGUGCUU	NM_001039948|SGSM1|129049|small G protein signaling modulator 1	NM_001098497|SGSM1|129049|small G protein signaling modulator 1	NM_001098498|SGSM1|129049|small G protein signaling modulator 1	NM_133454|SGSM1|129049|small G protein signaling modulator 1	AB275761|SGSM1|129049|small G protein signaling modulator 1	BC036915|SGSM1|129049|small G protein signaling modulator 1
hg18_v1_chr18_-_39111243_39111612	0.898935	UGUGCUU	EU176218|SYT4|6860|synaptotagmin IV	AK299652|SYT4|6860|synaptotagmin IV	AF299075|SYT4|6860|synaptotagmin IV	AK299593|SYT4|6860|synaptotagmin IV	AK297275|SYT4|6860|synaptotagmin IV	BC036538|SYT4|6860|synaptotagmin IV	AB037763|SYT4|6860|synaptotagmin IV	AK291154|SYT4|6860|synaptotagmin IV	AK293791|SYT4|6860|synaptotagmin IV	AK297379|SYT4|6860|synaptotagmin IV	AK311335|SYT4|6860|synaptotagmin IV	NM_020783|SYT4|6860|synaptotagmin IV
hg18_v1_chr11_-_118740069_118740116	0.898175	UGUGCUU	AF440755|USP2|9099|ubiquitin specific peptidase 2	NM_171997|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr4_-_123092358_123092358	0.896324	UGUGCUU	AY865574|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3	NM_001130698|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3
hg18_v1_chr12_+_77781903_77781903	0.896323	UGUGCUU	AK094616|SYT1|6857|synaptotagmin I	NM_001135805|SYT1|6857|synaptotagmin I
hg18_v1_chr8_-_93144366_93144366	0.892871	UGUGCUU	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr14_+_78815406_78815508	0.891155	UGUGCUU	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg18_v1_chrX_-_152749190_152749215	0.887333	UGUGCUU	AB103478|PDZD4|57595|PDZ domain containing 4	NM_032512|PDZD4|57595|PDZ domain containing 4	AK127016|PDZD4|57595|PDZ domain containing 4
hg18_v1_chr1_+_213323182_213323284	0.881522	UGUGCUU	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2	NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2	AK294780|KCNK2|3776|potassium channel, subfamily K, member 2	AK291483|KCNK2|3776|potassium channel, subfamily K, member 2	BC143586|KCNK2|3776|potassium channel, subfamily K, member 2	BC101693|KCNK2|3776|potassium channel, subfamily K, member 2	BC101695|KCNK2|3776|potassium channel, subfamily K, member 2	AF004711|KCNK2|3776|potassium channel, subfamily K, member 2	EF165334|KCNK2|3776|potassium channel, subfamily K, member 2	AF171068|KCNK2|3776|potassium channel, subfamily K, member 2	BC069462|KCNK2|3776|potassium channel, subfamily K, member 2	EF165335|KCNK2|3776|potassium channel, subfamily K, member 2
hg18_v1_chr10_+_42892506_42892712	0.878209	UGUGCUU	NM_020630|RET|5979|ret proto-oncogene	NM_020975|RET|5979|ret proto-oncogene	BC003072|RET|5979|ret proto-oncogene	BC004257|RET|5979|ret proto-oncogene	X15262|RET|5979|ret proto-oncogene	AK291807|RET|5979|ret proto-oncogene	Y12528|RET|5979|ret proto-oncogene
hg18_v1_chr4_+_8322358_8322593	0.874892	UGUGCUU	NM_053044|HTRA3|94031|HtrA serine peptidase 3	AY040094|HTRA3|94031|HtrA serine peptidase 3	BC034390|HTRA3|94031|HtrA serine peptidase 3	BC035717|HTRA3|94031|HtrA serine peptidase 3	CR604057|HTRA3|94031|HtrA serine peptidase 3	AY280665|HTRA3|94031|HtrA serine peptidase 3	AY280666|HTRA3|94031|HtrA serine peptidase 3	DQ891188|HTRA3|94031|HtrA serine peptidase 3	DQ894371|HTRA3|94031|HtrA serine peptidase 3
hg18_v1_chr12_-_37585602_37585699	0.873253	UGUGCUU	AM392913|CPNE8|144402|copine VIII	AY177785|CPNE8|144402|copine VIII	CR610762|CPNE8|144402|copine VIII	BC048260|CPNE8|144402|copine VIII	BC068040|CPNE8|144402|copine VIII	AK307908|CPNE8|144402|copine VIII	BC110577|CPNE8|144402|copine VIII	BC110578|CPNE8|144402|copine VIII	NM_153634|CPNE8|144402|copine VIII	BX538055|CPNE8|144402|copine VIII
hg18_v1_chr7_-_37454933_37455054	0.871021	UGUGCUU	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr3_+_152287365_152287370	0.866845	UGUGCUU	AF399708|MED12L|116931|mediator complex subunit 12-like	NM_053002|MED12L|116931|mediator complex subunit 12-like	BC144559|MED12L|116931|mediator complex subunit 12-like
hg18_v1_chr2_+_190710730_190710730	0.862175	UGUGCUU	NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chrX_+_16874651_16875056	0.856037	UGUGCUU	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2	NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2	AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2	AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2
hg18_v1_chr8_-_41641881_41641960	0.833916	UGUGCUU	AK223578|ANK1|286|ankyrin 1, erythrocytic	AK129864|ANK1|286|ankyrin 1, erythrocytic	BC007930|ANK1|286|ankyrin 1, erythrocytic	BC030957|ANK1|286|ankyrin 1, erythrocytic	BC014467|ANK1|286|ankyrin 1, erythrocytic	NM_001142445|ANK1|286|ankyrin 1, erythrocytic	NM_020478|ANK1|286|ankyrin 1, erythrocytic	NM_020480|ANK1|286|ankyrin 1, erythrocytic
hg18_v1_chr8_-_19504285_19504335	0.814631	UGUGCUU	BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1	NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1
hg18_v1_chr4_+_54790020_54790054	0.808694	UGUGCUU	NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg18_v1_chr22_+_38296703_38296703	0.804173	UGUGCUU	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg18_v1_chr6_-_167195647_167195790	0.801617	UGUGCUU	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr3_-_100103142_100103222	0.800506	UGUGCUU	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2
hg18_v1_chr11_-_133786935_133787127	0.800248	UGUGCUU	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg18_v1_chr8_-_70907957_70907957	0.795738	UGUGCUU	BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chrX_-_73751185_73751194	0.792858	UGUGCUU	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting	NM_183353|RLIM|51132|ring finger protein, LIM domain interacting
hg18_v1_chrX_+_49718954_49719016	0.776137	UGUGCUU	NM_000084|CLCN5|1184|chloride channel 5	AK308089|CLCN5|1184|chloride channel 5	AK290940|CLCN5|1184|chloride channel 5
hg18_v1_chr4_-_168392307_168392323	0.766933	UGUGCUU	AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg18_v1_chr11_+_8016755_8016755	0.763118	UGUGCUU	NM_003320|TUB|7275|tubby homolog (mouse)	U82467|TUB|7275|tubby homolog (mouse)
hg18_v1_chr5_-_88155360_88155499	0.761931	UGUGCUU	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr16_-_88604029_88604119	0.75918	UGUGCUU	BC000700|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_024043|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	AK090965|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg18_v1_chrX_-_109570113_109570116	0.757559	UGUGCUU	AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg18_v1_chr12_-_24947233_24947275	0.745767	UGUGCUU	AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr17_-_30414789_30414871	0.740869	UGUGCUU	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg18_v1_chrX_-_48713194_48713196	0.729753	UGUGCUU	BC045659|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1	NM_004979|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1
hg18_v1_chr11_+_63205444_63205801	0.717448	UGUGCUU	NM_006054|RTN3|10313|reticulon 3	NM_201428|RTN3|10313|reticulon 3	NM_201429|RTN3|10313|reticulon 3	NM_201430|RTN3|10313|reticulon 3	CR614599|RTN3|10313|reticulon 3	AY427821|RTN3|10313|reticulon 3	AY750848|RTN3|10313|reticulon 3	AK309766|RTN3|10313|reticulon 3	CR606090|RTN3|10313|reticulon 3	AK075412|RTN3|10313|reticulon 3	AK297533|RTN3|10313|reticulon 3	AK304100|RTN3|10313|reticulon 3	AK307811|RTN3|10313|reticulon 3	BC011394|RTN3|10313|reticulon 3	AK295534|RTN3|10313|reticulon 3	AK308083|RTN3|10313|reticulon 3	CR609229|RTN3|10313|reticulon 3	CR614083|RTN3|10313|reticulon 3	CR619650|RTN3|10313|reticulon 3	BC022993|RTN3|10313|reticulon 3	AB209771|RTN3|10313|reticulon 3	AF059524|RTN3|10313|reticulon 3	AK222898|RTN3|10313|reticulon 3	CR607815|RTN3|10313|reticulon 3	CR624616|RTN3|10313|reticulon 3	AF119297|RTN3|10313|reticulon 3	CR592349|RTN3|10313|reticulon 3	CR601675|RTN3|10313|reticulon 3	CR609823|RTN3|10313|reticulon 3	BC100822|RTN3|10313|reticulon 3	BC100823|RTN3|10313|reticulon 3	BC118550|RTN3|10313|reticulon 3	BC118628|RTN3|10313|reticulon 3	AK295758|RTN3|10313|reticulon 3	BC010556|RTN3|10313|reticulon 3	BC105982|RTN3|10313|reticulon 3	BC000634|RTN3|10313|reticulon 3	AK295361|RTN3|10313|reticulon 3	BC105981|RTN3|10313|reticulon 3	AK297529|RTN3|10313|reticulon 3	CR602829|RTN3|10313|reticulon 3	AK127079|RTN3|10313|reticulon 3
hg18_v1_chr3_+_129124591_129124593	0.712242	UGUGCUU	NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12
hg18_v1_chr19_-_37857897_37857957	0.7063	UGUGCUU	BC050529|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)	AF447882|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)	AL136784|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)	AK054561|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)	BC045605|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)	NM_032139|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)
hg18_v1_chr5_-_100266769_100266886	0.706278	UGUGCUU	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr3_-_24511180_24511316	0.704647	UGUGCUU	GQ919288|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286469|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286468|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286465|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286471|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286467|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	NM_001128176|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AY286466|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	AK096628|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	M26747|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	NM_000461|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	NM_001128177|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	X04707|THRB|7068|thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)
hg18_v1_chrX_+_106030049_106030049	0.700539	UGUGCUU	AF177340|CLDN2|9075|claudin 2	NM_001171092|CLDN2|9075|claudin 2
hg18_v1_chr1_-_153098811_153098961	0.699503	UGUGCUU	CR595038|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chrX_-_109447970_109448035	0.697396	UGUGCUU	BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg18_v1_chr11_-_73149705_73149886	0.697227	UGUGCUU	BC034996|RAB6A|5870|RAB6A, member RAS oncogene family	BC003617|RAB6A|5870|RAB6A, member RAS oncogene family	AK309311|RAB6A|5870|RAB6A, member RAS oncogene family	AK223551|RAB6A|5870|RAB6A, member RAS oncogene family	AK289748|RAB6A|5870|RAB6A, member RAS oncogene family	BC096818|RAB6A|5870|RAB6A, member RAS oncogene family	AK057157|RAB6A|5870|RAB6A, member RAS oncogene family	BC068486|RAB6A|5870|RAB6A, member RAS oncogene family	NM_002869|RAB6A|5870|RAB6A, member RAS oncogene family	NM_198896|RAB6A|5870|RAB6A, member RAS oncogene family
hg18_v1_chr15_+_73074882_73075038	0.694502	UGUGCUU	AK126940|SCAMP5|192683|secretory carrier membrane protein 5	NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5	NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5	NM_138967|SCAMP5|192683|secretory carrier membrane protein 5	AK056438|SCAMP5|192683|secretory carrier membrane protein 5	AL834226|SCAMP5|192683|secretory carrier membrane protein 5	AK301505|SCAMP5|192683|secretory carrier membrane protein 5	AF495715|SCAMP5|192683|secretory carrier membrane protein 5	AK127480|SCAMP5|192683|secretory carrier membrane protein 5	CR936761|SCAMP5|192683|secretory carrier membrane protein 5
hg18_v1_chr1_+_60053050_60053431	0.687282	UGUGCUU	AK292314|HOOK1|51361|hook homolog 1 (Drosophila)	BC011621|HOOK1|51361|hook homolog 1 (Drosophila)	NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)	AF044923|HOOK1|51361|hook homolog 1 (Drosophila)	BC107857|HOOK1|51361|hook homolog 1 (Drosophila)	DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)	DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)	AK097735|HOOK1|51361|hook homolog 1 (Drosophila)
hg18_v1_chr22_+_45401321_45401359	0.68676	UGUGCUU	CR456470|GRAMD4|23151|GRAM domain containing 4	NM_015124|GRAMD4|23151|GRAM domain containing 4	BC129837|GRAMD4|23151|GRAM domain containing 4
hg18_v1_chr3_-_125192888_125192888	0.682815	UGUGCUU	AF303889|ROPN1|54763|rhophilin associated tail protein 1	NM_017578|ROPN1|54763|rhophilin associated tail protein 1
hg18_v1_chr3_+_125296217_125296374	0.680584	UGUGCUU	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg18_v1_chr5_+_68549317_68549370	0.676547	UGUGCUU	NM_033281|MRPS36|92259|mitochondrial ribosomal protein S36	BC015966|MRPS36|92259|mitochondrial ribosomal protein S36
hg18_v1_chr1_-_195436258_195436294	0.664251	UGUGCUU	BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41	BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41	AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41	AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41	NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41
hg18_v1_chr2_-_158162271_158162371	0.660135	UGUGCUU	AF525679|ACVR1C|130399|activin A receptor, type IC	NM_001111031|ACVR1C|130399|activin A receptor, type IC
hg18_v1_chr18_+_2645885_2645943	0.656599	UGUGCUU	BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1	NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1
hg18_v1_chr14_+_74964261_74964528	0.654919	UGUGCUU	NM_001135047|JDP2|122953|Jun dimerization protein 2
hg18_v1_chr17_-_4216563_4216751	0.650276	UGUGCUU	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	CR623407|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)
hg18_v1_chr1_+_211190476_211190605	0.649794	UGUGCUU	AK290973|VASH2|79805|vasohibin 2	NM_001136474|VASH2|79805|vasohibin 2	NM_001136475|VASH2|79805|vasohibin 2	NM_024749|VASH2|79805|vasohibin 2	AK022567|VASH2|79805|vasohibin 2	AK096605|VASH2|79805|vasohibin 2	BC053836|VASH2|79805|vasohibin 2	BC051856|VASH2|79805|vasohibin 2	BC028194|VASH2|79805|vasohibin 2
hg18_v1_chr3_+_50259329_50259360	0.640717	UGUGCUU	NM_001166425|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	AK302330|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg18_v1_chr8_+_28615062_28615077	0.637403	UGUGCUU	AF001690|EXTL3|2137|exostoses (multiple)-like 3	AB007042|EXTL3|2137|exostoses (multiple)-like 3	AF083551|EXTL3|2137|exostoses (multiple)-like 3	NM_001440|EXTL3|2137|exostoses (multiple)-like 3
hg18_v1_chr13_+_27610379_27610953	0.635276	UGUGCUU	AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)	NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg18_v1_chr7_+_145444385_145444385	0.631264	UGUGCUU	NM_014141|CNTNAP2|26047|contactin associated protein-like 2
hg18_v1_chr21_-_26867138_26867473	0.6304	UGUGCUU	AY061853|CYYR1|116159|cysteine/tyrosine-rich 1	AF401639|CYYR1|116159|cysteine/tyrosine-rich 1	AK223576|CYYR1|116159|cysteine/tyrosine-rich 1	AK313231|CYYR1|116159|cysteine/tyrosine-rich 1	BC036761|CYYR1|116159|cysteine/tyrosine-rich 1	AL833200|CYYR1|116159|cysteine/tyrosine-rich 1	NM_052954|CYYR1|116159|cysteine/tyrosine-rich 1	AK054581|CYYR1|116159|cysteine/tyrosine-rich 1	AK304124|CYYR1|116159|cysteine/tyrosine-rich 1
hg18_v1_chr12_-_69434598_69434637	0.629217	UGUGCUU	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	CR625935|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chrX_+_117364055_117364332	0.628106	UGUGCUU	NM_001184965|WDR44|54521|WD repeat domain 44	NM_001184966|WDR44|54521|WD repeat domain 44	NM_019045|WDR44|54521|WD repeat domain 44	AK127556|WDR44|54521|WD repeat domain 44	BX537578|WDR44|54521|WD repeat domain 44	AL833605|WDR44|54521|WD repeat domain 44	BX538087|WDR44|54521|WD repeat domain 44	AK299711|WDR44|54521|WD repeat domain 44	BC028697|WDR44|54521|WD repeat domain 44	BX648150|WDR44|54521|WD repeat domain 44
hg18_v1_chrX_-_116991728_116991787	0.625464	UGUGCUU	AK125356|KLHL13|90293|kelch-like 13 (Drosophila)	NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr16_+_67778441_67778618	0.623573	UGUGCUU	BC031058|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	AF243385|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	NM_006750|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	U40572|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	BC048215|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	EU831451|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)	EU831538|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg18_v1_chr1_+_22762575_22762712	0.622603	UGUGCUU	BC072417|EPHA8|2046|EPH receptor A8	NM_001006943|EPHA8|2046|EPH receptor A8	NM_020526|EPHA8|2046|EPH receptor A8	CR614037|EPHA8|2046|EPH receptor A8	BC038796|EPHA8|2046|EPH receptor A8
hg18_v1_chr4_+_52403922_52404165	0.621751	UGUGCUU	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg18_v1_chr5_-_175989930_175990194	0.617569	UGUGCUU	S69965|SNCB|6620|synuclein, beta	BC002902|SNCB|6620|synuclein, beta	CR594995|SNCB|6620|synuclein, beta	NM_001001502|SNCB|6620|synuclein, beta	NM_003085|SNCB|6620|synuclein, beta
hg18_v1_chr16_+_57055049_57055113	0.613163	UGUGCUU	NM_020465|NDRG4|65009|NDRG family member 4
hg18_v1_chrX_-_20194629_20194674	0.611834	UGUGCUU	AB102662|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	L07599|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	BC096301|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	BC096302|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	BC096303|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	NM_004586|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	U08316|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	AK313932|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg18_v1_chr3_-_171382213_171382232	0.611178	UGUGCUU	AK022791|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	BC022325|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	AK300151|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	BC070164|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	AK304411|PHC3|80012|polyhomeotic homolog 3 (Drosophila)	NM_024947|PHC3|80012|polyhomeotic homolog 3 (Drosophila)
hg18_v1_chrX_-_64112993_64113155	0.609521	UGUGCUU	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	CR614211|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg18_v1_chr22_+_20101661_20101692	0.595986	UGUGCUU	AB028943|HIC2|23119|hypermethylated in cancer 2	NM_015094|HIC2|23119|hypermethylated in cancer 2
hg18_v1_chr11_-_70613455_70613455	0.595505	UGUGCUU	AB208025|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	NM_012309|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr1_-_40903897_40903950	0.588678	UGUGCUU	CR619233|RIMS3|9783|regulating synaptic membrane exocytosis 3	D87074|RIMS3|9783|regulating synaptic membrane exocytosis 3	NM_014747|RIMS3|9783|regulating synaptic membrane exocytosis 3
hg18_v1_chr15_+_76343540_76343659	0.583842	UGUGCUU	BC021720|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	NM_018602|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	AK098079|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	CR599385|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	BX648710|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4
hg18_v1_chr15_-_24513004_24513004	0.582169	UGUGCUU	AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg18_v1_chr15_+_89444185_89444242	0.58083	UGUGCUU	NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B	AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr22_-_43784093_43784244	0.57574	UGUGCUU	CU012999|PHF21B|112885|PHD finger protein 21B	CU013287|PHF21B|112885|PHD finger protein 21B	CR456448|PHF21B|112885|PHD finger protein 21B	BC012187|PHF21B|112885|PHD finger protein 21B	NM_138415|PHF21B|112885|PHD finger protein 21B
hg18_v1_chr3_-_56477404_56477430	0.570537	UGUGCUU	BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2	BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2	AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2	NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2
hg18_v1_chrX_+_16714452_16714607	0.570109	UGUGCUU	NM_001168683|TXLNG|55787|taxilin gamma	NM_018360|TXLNG|55787|taxilin gamma	AK002071|TXLNG|55787|taxilin gamma	BC101572|TXLNG|55787|taxilin gamma	BC101576|TXLNG|55787|taxilin gamma	AY739713|TXLNG|55787|taxilin gamma
hg18_v1_chr11_+_110978309_110978578	0.564384	UGUGCUU	NM_015191|SIK2|23235|salt-inducible kinase 2	AK291233|SIK2|23235|salt-inducible kinase 2	AL136764|SIK2|23235|salt-inducible kinase 2	AB018324|SIK2|23235|salt-inducible kinase 2	AB096248|SIK2|23235|salt-inducible kinase 2	AK000396|SIK2|23235|salt-inducible kinase 2	BC113459|SIK2|23235|salt-inducible kinase 2	BC117183|SIK2|23235|salt-inducible kinase 2	AB084424|SIK2|23235|salt-inducible kinase 2
hg18_v1_chrX_+_71318250_71318351	0.555294	UGUGCUU	NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg18_v1_chr17_+_54763689_54763911	0.554361	UGUGCUU	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)	BC132884|YPEL2|388403|yippee-like 2 (Drosophila)	BC132886|YPEL2|388403|yippee-like 2 (Drosophila)	AK097253|YPEL2|388403|yippee-like 2 (Drosophila)	AB098736|YPEL2|388403|yippee-like 2 (Drosophila)
hg18_v1_chrX_-_74660024_74660061	0.551487	UGUGCUU	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr21_+_26029128_26029158	0.550951	UGUGCUU	NM_001197297|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr7_+_45580606_45580649	0.550175	UGUGCUU	AF497515|ADCY1|107|adenylate cyclase 1 (brain)	NM_021116|ADCY1|107|adenylate cyclase 1 (brain)
hg18_v1_chr4_-_177160566_177160641	0.549645	UGUGCUU	NM_005277|GPM6A|2823|glycoprotein M6A	NM_201592|GPM6A|2823|glycoprotein M6A
hg18_v1_chr11_-_30558495_30558615	0.549283	UGUGCUU	NM_001584|MPPED2|744|metallophosphoesterase domain containing 2	U57911|MPPED2|744|metallophosphoesterase domain containing 2
hg18_v1_chr4_+_115739006_115739059	0.547022	UGUGCUU	AK127970|UGT8|7368|UDP glycosyltransferase 8	NM_001128174|UGT8|7368|UDP glycosyltransferase 8
hg18_v1_chrX_+_106050261_106050385	0.545678	UGUGCUU	NM_020384|CLDN2|9075|claudin 2	BC071747|CLDN2|9075|claudin 2	AK075405|CLDN2|9075|claudin 2	AK075371|CLDN2|9075|claudin 2
hg18_v1_chr20_+_17155617_17155630	0.538292	UGUGCUU	NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg18_v1_chr15_-_24425329_24425417	0.530306	UGUGCUU	AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg18_v1_chr11_-_31789431_31789459	0.529404	UGUGCUU	AB209177|PAX6|5080|paired box 6	BX640762|PAX6|5080|paired box 6	NM_000280|PAX6|5080|paired box 6	NM_001604|PAX6|5080|paired box 6
hg18_v1_chr15_-_50758100_50758247	0.529029	UGUGCUU	AB037791|KIAA1370|56204|KIAA1370	AK292917|KIAA1370|56204|KIAA1370	NM_019600|KIAA1370|56204|KIAA1370	BC040548|KIAA1370|56204|KIAA1370	AK308049|KIAA1370|56204|KIAA1370
hg18_v1_chr1_+_209586328_209586328	0.528899	UGUGCUU	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chr1_-_233880676_233880676	0.525272	UGUGCUU	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4
hg18_v1_chr1_+_109892708_109892738	0.523911	UGUGCUU	NM_006496|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg18_v1_chr7_-_131911808_131911862	0.520464	UGUGCUU	NM_001105543|PLXNA4|91584|plexin A4	NM_020911|PLXNA4|91584|plexin A4
hg18_v1_chr17_+_72692889_72692889	0.520323	UGUGCUU	AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)
hg18_v1_chr14_+_102128844_102128985	0.519323	UGUGCUU	AF155595|RCOR1|23186|REST corepressor 1	NM_015156|RCOR1|23186|REST corepressor 1
hg18_v1_chr4_-_78959532_78959605	0.518441	UGUGCUU	AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like	AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like	AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like	NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like
hg18_v1_chrX_+_56275510_56275761	0.518055	UGUGCUU	NM_007250|KLF8|11279|Kruppel-like factor 8	BC063276|KLF8|11279|Kruppel-like factor 8	AK296156|KLF8|11279|Kruppel-like factor 8	NM_001159296|KLF8|11279|Kruppel-like factor 8	BX641066|KLF8|11279|Kruppel-like factor 8
hg18_v1_chr8_+_26206648_26206648	0.514821	UGUGCUU	AK303981|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	NM_001177591|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha
hg18_v1_chr11_+_93157042_93157101	0.514758	UGUGCUU	NM_004268|MED17|9440|mediator complex subunit 17	AK001674|MED17|9440|mediator complex subunit 17	AK022156|MED17|9440|mediator complex subunit 17	AK299702|MED17|9440|mediator complex subunit 17
hg18_v1_chr6_+_99389300_99389303	0.513974	UGUGCUU	AK095588|POU3F2|5454|POU class 3 homeobox 2	NM_005604|POU3F2|5454|POU class 3 homeobox 2
hg18_v1_chr3_-_102878301_102878720	0.513113	UGUGCUU	BC111700|ZBTB11|27107|zinc finger and BTB domain containing 11	U69274|ZBTB11|27107|zinc finger and BTB domain containing 11	BC028062|ZBTB11|27107|zinc finger and BTB domain containing 11	AK312859|ZBTB11|27107|zinc finger and BTB domain containing 11	NM_014415|ZBTB11|27107|zinc finger and BTB domain containing 11
hg18_v1_chr2_+_238200922_238201274	0.508792	UGUGCUU	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg18_v1_chr12_+_4788602_4788750	0.508315	UGUGCUU	NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6	X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6
hg18_v1_chr22_+_22996749_22996932	0.50732	UGUGCUU	NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like	NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like	AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like	AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like	AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like	BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like	BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like
hg18_v1_chr11_-_126375895_126375975	0.505401	UGUGCUU	AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)
hg18_v1_chr15_+_76343956_76344043	0.500158	UGUGCUU	AK096616|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	NM_001130182|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4
hg18_v1_chr12_-_368689_369037	0.499468	UGUGCUU	AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A	AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A	AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A	BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A	BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A	NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A	BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A
hg18_v1_chr2_-_135193011_135193041	0.497982	UGUGCUU	BC026170|TMEM163|81615|transmembrane protein 163	NM_030923|TMEM163|81615|transmembrane protein 163
hg18_v1_chr3_+_63238854_63239061	0.497243	UGUGCUU	NM_001130003|SYNPR|132204|synaptoporin	AK309017|SYNPR|132204|synaptoporin	CR936762|SYNPR|132204|synaptoporin	AK293628|SYNPR|132204|synaptoporin
hg18_v1_chr16_+_54782751_54782754	0.494099	UGUGCUU	NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O	NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg18_v1_chr9_+_34948171_34948191	0.493444	UGUGCUU	BC041169|KIAA1045|23349|KIAA1045	NM_015297|KIAA1045|23349|KIAA1045
hg18_v1_chr3_+_129253816_129253938	0.48356	UGUGCUU	AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg18_v1_chr13_+_108079570_108079571	0.480977	UGUGCUU	AB290159|MYO16|23026|myosin XVI	AK127806|MYO16|23026|myosin XVI	NM_001198950|MYO16|23026|myosin XVI
hg18_v1_chr6_+_64339869_64339881	0.480326	UGUGCUU	BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr12_-_54901946_54902039	0.479766	UGUGCUU	BC024284|RNF41|10193|ring finger protein 41	CR623486|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41
hg18_v1_chr12_+_77782579_77782633	0.467638	UGUGCUU	AK126908|SYT1|6857|synaptotagmin I	NM_005639|SYT1|6857|synaptotagmin I
hg18_v1_chr1_-_102235377_102235380	0.462362	UGUGCUU	NM_058170|OLFM3|118427|olfactomedin 3
hg18_v1_chr9_-_34366831_34367036	0.460237	UGUGCUU	BC070098|KIAA1161|57462|KIAA1161	NM_020702|KIAA1161|57462|KIAA1161
hg18_v1_chr14_-_50632171_50632171	0.455622	UGUGCUU	NM_015163|TRIM9|114088|tripartite motif containing 9	NM_052978|TRIM9|114088|tripartite motif containing 9
hg18_v1_chr4_-_6525217_6525252	0.452279	UGUGCUU	NM_020416|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma
hg18_v1_chrX_+_105932536_105932739	0.449738	UGUGCUU	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)
hg18_v1_chr3_-_121295663_121296019	0.448452	UGUGCUU	BC012760|GSK3B|2932|glycogen synthase kinase 3 beta	NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta	NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr5_+_7449030_7449507	0.446466	UGUGCUU	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)	AF410885|ADCY2|108|adenylate cyclase 2 (brain)	AK127036|ADCY2|108|adenylate cyclase 2 (brain)	BC111743|ADCY2|108|adenylate cyclase 2 (brain)	AK304041|ADCY2|108|adenylate cyclase 2 (brain)
hg18_v1_chr2_-_65447370_65447434	0.446433	UGUGCUU	NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2
hg18_v1_chr15_-_70385709_70385709	0.444028	UGUGCUU	AK294382|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6
hg18_v1_chr6_+_111515473_111515503	0.437626	UGUGCUU	AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)	NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)	BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)
hg18_v1_chr15_+_38520594_38520716	0.434735	UGUGCUU	BC022782|BAHD1|22893|bromo adjacent homology domain containing 1	NM_014952|BAHD1|22893|bromo adjacent homology domain containing 1
hg18_v1_chr17_-_3740785_3740785	0.433634	UGUGCUU	AF425301|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha	NM_172206|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg18_v1_chr4_+_41631862_41632073	0.433062	UGUGCUU	NM_018126|TMEM33|55161|transmembrane protein 33	CR609993|TMEM33|55161|transmembrane protein 33	AK023062|TMEM33|55161|transmembrane protein 33	AK001387|TMEM33|55161|transmembrane protein 33	AK094190|TMEM33|55161|transmembrane protein 33	AK308501|TMEM33|55161|transmembrane protein 33	AY659966|TMEM33|55161|transmembrane protein 33	CR592529|TMEM33|55161|transmembrane protein 33
hg18_v1_chr17_-_59817722_59817742	0.432189	UGUGCUU	BC022512|PECAM1|5175|platelet/endothelial cell adhesion molecule	BC051822|PECAM1|5175|platelet/endothelial cell adhesion molecule	NM_000442|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr11_-_93774223_93774237	0.430188	UGUGCUU	AK315161|GPR83|10888|G protein-coupled receptor 83	NM_016540|GPR83|10888|G protein-coupled receptor 83
hg18_v1_chr22_+_38075703_38075999	0.428988	UGUGCUU	NM_004711|SYNGR1|9145|synaptogyrin 1	NM_145731|SYNGR1|9145|synaptogyrin 1	BC000731|SYNGR1|9145|synaptogyrin 1	CR594457|SYNGR1|9145|synaptogyrin 1	AK295863|SYNGR1|9145|synaptogyrin 1	CR592136|SYNGR1|9145|synaptogyrin 1	CR456590|SYNGR1|9145|synaptogyrin 1	AK289507|SYNGR1|9145|synaptogyrin 1	CU013190|SYNGR1|9145|synaptogyrin 1	CU013478|SYNGR1|9145|synaptogyrin 1	AJ002304|SYNGR1|9145|synaptogyrin 1	AJ002305|SYNGR1|9145|synaptogyrin 1	BT007135|SYNGR1|9145|synaptogyrin 1
hg18_v1_chr19_+_3175700_3175708	0.428812	UGUGCUU	BC028101|CELF5|60680|CUGBP, Elav-like family member 5	NM_021938|CELF5|60680|CUGBP, Elav-like family member 5	AB209067|CELF5|60680|CUGBP, Elav-like family member 5	NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5
hg18_v1_chr12_-_108989882_108989882	0.422308	UGUGCUU	AK097461|C12orf76|400073|chromosome 12 open reading frame 76	NM_207435|C12orf76|400073|chromosome 12 open reading frame 76
hg18_v1_chr1_-_152422322_152422348	0.417685	UGUGCUU	AK298678|TPM3|7170|tropomyosin 3	NM_001043351|TPM3|7170|tropomyosin 3	NM_001043352|TPM3|7170|tropomyosin 3	NM_001043353|TPM3|7170|tropomyosin 3	NM_153649|TPM3|7170|tropomyosin 3
hg18_v1_chrX_+_106048245_106048245	0.416814	UGUGCUU	AK312515|CLDN2|9075|claudin 2	NM_001171095|CLDN2|9075|claudin 2
hg18_v1_chr7_+_106472243_106472636	0.415513	UGUGCUU	BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta	AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta
hg18_v1_chr3_+_124403463_124403498	0.415318	UGUGCUU	NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)	AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)	AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
hg18_v1_chrX_+_108665665_108665676	0.412251	UGUGCUU	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr15_+_89444433_89444548	0.412209	UGUGCUU	NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B	BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B
hg18_v1_chr6_+_97117144_97117237	0.410495	UGUGCUU	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg18_v1_chr11_-_44288188_44288316	0.409091	UGUGCUU	AB058691|ALX4|60529|ALX homeobox 4	AJ404888|ALX4|60529|ALX homeobox 4	AF294629|ALX4|60529|ALX homeobox 4	NM_021926|ALX4|60529|ALX homeobox 4	AK092346|ALX4|60529|ALX homeobox 4
hg18_v1_chr11_-_77806500_77806549	0.405966	UGUGCUU	NM_080491|GAB2|9846|GRB2-associated binding protein 2
hg18_v1_chr17_-_59932872_59932947	0.405916	UGUGCUU	NM_004396|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
hg18_v1_chr15_-_48198697_48198819	0.401822	UGUGCUU	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg18_v1_chr7_-_44891471_44891517	0.400336	UGUGCUU	AY039216|PURB|5814|purine-rich element binding protein B	NM_033224|PURB|5814|purine-rich element binding protein B	BC101735|PURB|5814|purine-rich element binding protein B	BC101737|PURB|5814|purine-rich element binding protein B
hg18_v1_chrX_-_129230434_129230620	0.399651	UGUGCUU	AK000102|ZNF280C|55609|zinc finger protein 280C	AL834333|ZNF280C|55609|zinc finger protein 280C	AL133204|ZNF280C|55609|zinc finger protein 280C	AK290373|ZNF280C|55609|zinc finger protein 280C	BC051728|ZNF280C|55609|zinc finger protein 280C	NM_017666|ZNF280C|55609|zinc finger protein 280C
hg18_v1_chr3_+_57517013_57517092	0.399107	UGUGCUU	NM_177966|PDE12|201626|phosphodiesterase 12	AK300374|PDE12|201626|phosphodiesterase 12	BC034978|PDE12|201626|phosphodiesterase 12	BX647169|PDE12|201626|phosphodiesterase 12	AK074423|PDE12|201626|phosphodiesterase 12	AB115695|PDE12|201626|phosphodiesterase 12
hg18_v1_chr7_+_44762311_44762373	0.395524	UGUGCUU	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg18_v1_chr7_+_128257698_128257718	0.388338	UGUGCUU	AB371585|FLNC|2318|filamin C, gamma	AF146692|FLNC|2318|filamin C, gamma	NM_001127487|FLNC|2318|filamin C, gamma	NM_001458|FLNC|2318|filamin C, gamma
hg18_v1_chr11_-_17147863_17147929	0.388294	UGUGCUU	Y13367|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide	BC113658|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide	NM_002645|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide
hg18_v1_chr11_-_16387001_16387005	0.381753	UGUGCUU	BC037866|SOX6|55553|SRY (sex determining region Y)-box 6	NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr5_-_83052606_83052775	0.378565	UGUGCUU	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1	X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1
hg18_v1_chr2_-_98591337_98591449	0.37774	UGUGCUU	CR590322|C2orf64|493753|chromosome 2 open reading frame 64	BC047722|C2orf64|493753|chromosome 2 open reading frame 64	NM_001008215|C2orf64|493753|chromosome 2 open reading frame 64	AK131034|C2orf64|493753|chromosome 2 open reading frame 64
hg18_v1_chrX_-_138617994_138618046	0.374896	UGUGCUU	AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence	AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence
hg18_v1_chr20_-_1921451_1921451	0.373034	UGUGCUU	AK289618|PDYN|5173|prodynorphin	NM_001190892|PDYN|5173|prodynorphin
hg18_v1_chr15_+_62578671_62578671	0.372845	UGUGCUU	NM_015042|ZNF609|23060|zinc finger protein 609
hg18_v1_chr1_-_233879617_233879994	0.370937	UGUGCUU	CR607248|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	CR593666|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	CR592582|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4
hg18_v1_chr2_-_70848354_70848354	0.361524	UGUGCUU	BC065525|ADD2|119|adducin 2 (beta)	NM_001185054|ADD2|119|adducin 2 (beta)
hg18_v1_chr20_+_57942213_57942213	0.36001	UGUGCUU	AK125073|C20orf177|63939|chromosome 20 open reading frame 177	NM_001190826|C20orf177|63939|chromosome 20 open reading frame 177
hg18_v1_chr17_-_43533760_43533881	0.359847	UGUGCUU	U35451|CBX1|10951|chromobox homolog 1	BC002609|CBX1|10951|chromobox homolog 1	AK312615|CBX1|10951|chromobox homolog 1	NM_001127228|CBX1|10951|chromobox homolog 1
hg18_v1_chr22_-_43784444_43784472	0.359768	UGUGCUU	AK092243|PHF21B|112885|PHD finger protein 21B	NM_001135862|PHF21B|112885|PHD finger protein 21B
hg18_v1_chr16_+_22733307_22733397	0.359251	UGUGCUU	AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	CR620513|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
hg18_v1_chr3_-_172109119_172109187	0.358346	UGUGCUU	AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2	AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2	AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2	AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2	NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2
hg18_v1_chr1_+_204797079_204797117	0.355892	UGUGCUU	NM_182665|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5	AF445801|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5
hg18_v1_chr18_+_72665103_72665103	0.354148	UGUGCUU	AF085243|ZNF236|7776|zinc finger protein 236	AF085244|ZNF236|7776|zinc finger protein 236	NM_007345|ZNF236|7776|zinc finger protein 236
hg18_v1_chr21_+_26029193_26029199	0.353302	UGUGCUU	NM_002040|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa
hg18_v1_chr8_-_114458557_114458557	0.351962	UGUGCUU	AB114605|CSMD3|114788|CUB and Sushi multiple domains 3	NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3
hg18_v1_chr8_-_33576907_33577026	0.351037	UGUGCUU	CR591909|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR621684|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR604644|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)	AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)	AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)	BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)	NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR609273|DUSP26|78986|dual specificity phosphatase 26 (putative)	CR616533|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr14_+_96038451_96038473	0.350464	UGUGCUU	AK302406|PAPOLA|10914|poly(A) polymerase alpha	BC036014|PAPOLA|10914|poly(A) polymerase alpha	NM_032632|PAPOLA|10914|poly(A) polymerase alpha
hg18_v1_chr7_+_138566770_138566770	0.3471	UGUGCUU	NM_173569|UBN2|254048|ubinuclein 2
hg18_v1_chr1_+_65386359_65386514	0.345147	UGUGCUU	NM_013410|AK4|205|adenylate kinase 4	AK025926|AK4|205|adenylate kinase 4	AK313611|AK4|205|adenylate kinase 4	X60673|AK4|205|adenylate kinase 4
hg18_v1_chrX_-_131401319_131401398	0.332502	UGUGCUU	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr5_+_14717764_14717788	0.330581	UGUGCUU	NM_138348|FAM105B|90268|family with sequence similarity 105, member B
hg18_v1_chr4_-_90197140_90197345	0.330407	UGUGCUU	BC063126|FAM13A|10144|family with sequence similarity 13, member A	BC041029|FAM13A|10144|family with sequence similarity 13, member A	CR610852|FAM13A|10144|family with sequence similarity 13, member A	BC053569|FAM13A|10144|family with sequence similarity 13, member A	BX647410|FAM13A|10144|family with sequence similarity 13, member A	CR615111|FAM13A|10144|family with sequence similarity 13, member A	NM_014883|FAM13A|10144|family with sequence similarity 13, member A
hg18_v1_chr12_+_103221590_103221726	0.328515	UGUGCUU	AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3	BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3	NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3
hg18_v1_chrX_+_47305459_47305564	0.327633	UGUGCUU	NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog
hg18_v1_chr1_+_35811557_35811557	0.325921	UGUGCUU	AY326454|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)	BC041175|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)	NM_178548|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
hg18_v1_chr3_+_47299333_47299532	0.323997	UGUGCUU	NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)	AK023765|KLHL18|23276|kelch-like 18 (Drosophila)	AK291477|KLHL18|23276|kelch-like 18 (Drosophila)	AK295292|KLHL18|23276|kelch-like 18 (Drosophila)	BX537953|KLHL18|23276|kelch-like 18 (Drosophila)	BC015962|KLHL18|23276|kelch-like 18 (Drosophila)	AM393269|KLHL18|23276|kelch-like 18 (Drosophila)	AM393767|KLHL18|23276|kelch-like 18 (Drosophila)	BC032620|KLHL18|23276|kelch-like 18 (Drosophila)
hg18_v1_chr20_-_30534848_30535004	0.323099	UGUGCUU	AK056286|C20orf112|140688|chromosome 20 open reading frame 112	NM_080616|C20orf112|140688|chromosome 20 open reading frame 112	CR621375|C20orf112|140688|chromosome 20 open reading frame 112
hg18_v1_chr20_-_1922393_1922393	0.323083	UGUGCUU	NM_001190900|PDYN|5173|prodynorphin
hg18_v1_chr12_-_52960168_52960181	0.322052	UGUGCUU	NM_012117|CBX5|23468|chromobox homolog 5
hg18_v1_chr17_-_24645289_24645293	0.3199	UGUGCUU	AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2
hg18_v1_chrX_-_138552517_138552665	0.319259	UGUGCUU	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg18_v1_chr20_+_2792688_2792879	0.316481	UGUGCUU	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg18_v1_chr1_+_93317374_93317469	0.315435	UGUGCUU	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	CR599562|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	CR594521|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg18_v1_chr16_-_66397965_66398055	0.313683	UGUGCUU	BC121176|RANBP10|57610|RAN binding protein 10	BC121177|RANBP10|57610|RAN binding protein 10	AY337313|RANBP10|57610|RAN binding protein 10	NM_020850|RANBP10|57610|RAN binding protein 10
hg18_v1_chr20_-_1922701_1922890	0.313483	UGUGCUU	AK316076|PDYN|5173|prodynorphin	BC026334|PDYN|5173|prodynorphin	NM_001190899|PDYN|5173|prodynorphin	NM_001190898|PDYN|5173|prodynorphin	NM_024411|PDYN|5173|prodynorphin
hg18_v1_chr10_+_12150927_12150958	0.312708	UGUGCUU	NM_018706|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1
hg18_v1_chr10_-_97190885_97190926	0.308481	UGUGCUU	AM393082|SORBS1|10580|sorbin and SH3 domain containing 1	NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1	NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1	NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1	NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1	NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1
hg18_v1_chr12_-_52939584_52939599	0.305872	UGUGCUU	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg18_v1_chr11_+_66643311_66643319	0.302824	UGUGCUU	BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A	NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A
hg18_v1_chrX_-_15783015_15783033	0.302565	UGUGCUU	NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr7_+_128166581_128166630	0.298223	UGUGCUU	HM002604|CALU|813|calumenin	HM002605|CALU|813|calumenin	HM002606|CALU|813|calumenin	HM002607|CALU|813|calumenin	HM002609|CALU|813|calumenin	HM002610|CALU|813|calumenin	HM002611|CALU|813|calumenin	HM002613|CALU|813|calumenin	HM002615|CALU|813|calumenin	HM002616|CALU|813|calumenin	NM_001130674|CALU|813|calumenin	NM_001219|CALU|813|calumenin
hg18_v1_chr17_+_41217391_41217408	0.297849	UGUGCUU	NM_001145146|CRHR1|1394|corticotropin releasing hormone receptor 1	NM_001145147|CRHR1|1394|corticotropin releasing hormone receptor 1	NM_001145148|CRHR1|1394|corticotropin releasing hormone receptor 1	NM_004382|CRHR1|1394|corticotropin releasing hormone receptor 1
hg18_v1_chr2_-_40593074_40593078	0.292509	UGUGCUU	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1
hg18_v1_chr1_+_153513810_153514192	0.29048	UGUGCUU	AK299333|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3	BC111364|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3	AF488550|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3	NM_020897|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3	AK055840|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3	AB040968|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3
hg18_v1_chr13_+_108046500_108046530	0.289777	UGUGCUU	AB020672|MYO16|23026|myosin XVI	BC146791|MYO16|23026|myosin XVI	NM_015011|MYO16|23026|myosin XVI	AL834447|MYO16|23026|myosin XVI
hg18_v1_chr17_+_39619826_39619943	0.288069	UGUGCUU	AK294198|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AK096631|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_001076674|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_024107|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR622157|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AY358780|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC063489|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR623781|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC004306|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR591425|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	CR611525|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg18_v1_chr3_+_38181972_38182118	0.287822	UGUGCUU	AB017642|OXSR1|9943|oxidative-stress responsive 1	NM_005109|OXSR1|9943|oxidative-stress responsive 1	BC008726|OXSR1|9943|oxidative-stress responsive 1
hg18_v1_chr1_-_6243621_6243719	0.2858	UGUGCUU	BC068275|GPR153|387509|G protein-coupled receptor 153	NM_207370|GPR153|387509|G protein-coupled receptor 153
hg18_v1_chr9_+_130913048_130913064	0.28378	UGUGCUU	NM_021131|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4	BC002545|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4	BC011605|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4
hg18_v1_chr8_-_53484753_53484994	0.283444	UGUGCUU	AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)	NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg18_v1_chr5_-_32348826_32348954	0.277425	UGUGCUU	AK000483|MTMR12|54545|myotubularin related protein 12	NM_001040446|MTMR12|54545|myotubularin related protein 12
hg18_v1_chr18_+_75256702_75256901	0.272347	UGUGCUU	NM_006162|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_172388|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_172390|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	U80917|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg18_v1_chr5_-_127901633_127901848	0.271517	UGUGCUU	NM_001999|FBN2|2201|fibrillin 2	AF193046|FBN2|2201|fibrillin 2	CR612828|FBN2|2201|fibrillin 2
hg18_v1_chrX_+_9714465_9714495	0.271481	UGUGCUU	NM_001649|SHROOM2|357|shroom family member 2	X83543|SHROOM2|357|shroom family member 2
hg18_v1_chr6_-_107542328_107542328	0.268978	UGUGCUU	BC131628|BEND3|57673|BEN domain containing 3	NM_001080450|BEND3|57673|BEN domain containing 3
hg18_v1_chr20_+_43425153_43425310	0.266645	UGUGCUU	NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR605916|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR616955|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR596680|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR623457|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR607560|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR623013|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 read-through transcript	AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	CR624106|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg18_v1_chr7_+_23603495_23603585	0.263779	UGUGCUU	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg18_v1_chr8_-_40874485_40874503	0.263388	UGUGCUU	BC019598|ZMAT4|79698|zinc finger, matrin-type 4	AK023904|ZMAT4|79698|zinc finger, matrin-type 4	NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4	NM_024645|ZMAT4|79698|zinc finger, matrin-type 4
hg18_v1_chr11_+_20365651_20365733	0.259617	UGUGCUU	NM_001145166|PRMT3|10196|protein arginine methyltransferase 3	NM_001145167|PRMT3|10196|protein arginine methyltransferase 3	NM_005788|PRMT3|10196|protein arginine methyltransferase 3	BC064831|PRMT3|10196|protein arginine methyltransferase 3	BC019339|PRMT3|10196|protein arginine methyltransferase 3	AK129984|PRMT3|10196|protein arginine methyltransferase 3
hg18_v1_chr3_+_40403676_40403754	0.25598	UGUGCUU	NM_001248|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3	AF034840|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3	AF039917|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3	AK313322|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3
hg18_v1_chrX_+_115481774_115481817	0.253308	UGUGCUU	AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14
hg18_v1_chr15_-_70399301_70399340	0.253171	UGUGCUU	AF425606|CELF6|60677|CUGBP, Elav-like family member 6	NM_001172684|CELF6|60677|CUGBP, Elav-like family member 6
hg18_v1_chr20_+_2851852_2851911	0.250739	UGUGCUU	NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg18_v1_chr15_+_72694387_72694387	0.249601	UGUGCUU	AK091692|CLK3|1198|CDC-like kinase 3	NM_001130028|CLK3|1198|CDC-like kinase 3
hg18_v1_chr7_-_129379947_129380027	0.248946	UGUGCUU	BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)	NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)	NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)
hg18_v1_chr1_+_65385799_65386100	0.248281	UGUGCUU	NM_203464|AK4|205|adenylate kinase 4	BC146653|AK4|205|adenylate kinase 4	BC016180|AK4|205|adenylate kinase 4	AK309057|AK4|205|adenylate kinase 4	BC066944|AK4|205|adenylate kinase 4	NM_001005353|AK4|205|adenylate kinase 4
hg18_v1_chr2_-_152663454_152663498	0.244116	UGUGCUU	AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr8_-_70908130_70908178	0.240944	UGUGCUU	CR596526|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1
hg18_v1_chr11_-_74914066_74914246	0.239941	UGUGCUU	BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5	NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5
hg18_v1_chrX_-_10605726_10605787	0.238923	UGUGCUU	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr22_-_39545197_39545350	0.238782	UGUGCUU	CU013178|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	CU013466|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	DQ893138|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	DQ896422|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	CR624010|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	CR612075|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	AK298215|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	AK300553|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	CR456577|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	BC012998|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	BX647991|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	CR610082|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	AK292924|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	BC005957|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	BC024741|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	BC039064|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	Y12860|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	NM_006358|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17	CR598344|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
hg18_v1_chr3_-_88190737_88190930	0.236236	UGUGCUU	BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1	AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1	NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1	NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1
hg18_v1_chr12_-_98072602_98072806	0.235492	UGUGCUU	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	CR602042|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg18_v1_chr7_-_122627235_122627260	0.232007	UGUGCUU	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg18_v1_chr7_+_5196300_5196411	0.228638	UGUGCUU	AL080155|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	NM_001033518|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	NM_001033519|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	NM_015610|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	NM_016003|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	AK024279|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	BC007596|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	AK023041|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	CR590803|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2
hg18_v1_chr1_+_36121382_36121399	0.228392	UGUGCUU	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr14_+_93562436_93562476	0.227773	UGUGCUU	BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2
hg18_v1_chr7_+_5220342_5220494	0.225703	UGUGCUU	BC016912|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	AF151808|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	NM_001033520|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	AY691426|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2
hg18_v1_chr11_+_56705796_56705954	0.225019	UGUGCUU	AK127591|LRRC55|219527|leucine rich repeat containing 55	NM_001005210|LRRC55|219527|leucine rich repeat containing 55	BC136737|LRRC55|219527|leucine rich repeat containing 55	BC136739|LRRC55|219527|leucine rich repeat containing 55	BC150572|LRRC55|219527|leucine rich repeat containing 55
hg18_v1_chr2_-_21120420_21120449	0.224211	UGUGCUU	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)	NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)	X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)	X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr2_-_20390601_20390627	0.222438	UGUGCUU	D87078|PUM2|23369|pumilio homolog 2 (Drosophila)	AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)	NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)	BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)	BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)	BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)	BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr15_-_66285427_66285514	0.220902	UGUGCUU	CR598967|CALML4|91860|calmodulin-like 4	BX640817|CALML4|91860|calmodulin-like 4	NM_001031733|CALML4|91860|calmodulin-like 4	NM_033429|CALML4|91860|calmodulin-like 4
hg18_v1_chrX_-_117003310_117003403	0.219885	UGUGCUU	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr12_-_23628774_23628812	0.2159	UGUGCUU	NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5	AK098610|SOX5|6660|SRY (sex determining region Y)-box 5	AK223536|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr12_+_22669275_22669345	0.214316	UGUGCUU	AF207600|ETNK1|55500|ethanolamine kinase 1	BC066907|ETNK1|55500|ethanolamine kinase 1	NM_001039481|ETNK1|55500|ethanolamine kinase 1	NM_018638|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chr17_-_36403910_36403963	0.213849	UGUGCUU	AJ406933|KRTAP3-3|85293|keratin associated protein 3-3	BC069099|KRTAP3-3|85293|keratin associated protein 3-3	BC069448|KRTAP3-3|85293|keratin associated protein 3-3	NM_033185|KRTAP3-3|85293|keratin associated protein 3-3	BC093845|KRTAP3-3|85293|keratin associated protein 3-3	BC093847|KRTAP3-3|85293|keratin associated protein 3-3
hg18_v1_chr9_-_36391149_36391201	0.213413	UGUGCUU	NM_194330|RNF38|152006|ring finger protein 38
hg18_v1_chr2_-_127817143_127817274	0.210337	UGUGCUU	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2
hg18_v1_chr12_-_107775462_107775640	0.208743	UGUGCUU	BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)	NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)	CR623842|SSH1|54434|slingshot homolog 1 (Drosophila)
hg18_v1_chr4_-_71924477_71924525	0.208704	UGUGCUU	NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1	AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1
hg18_v1_chr1_-_32600430_32600430	0.208587	UGUGCUU	NM_001167676|LOC100128071|100128071|hypothetical LOC100128071
hg18_v1_chr11_+_73559964_73560019	0.203888	UGUGCUU	BC003046|PPME1|51400|protein phosphatase methylesterase 1	BC050705|PPME1|51400|protein phosphatase methylesterase 1	AK225647|PPME1|51400|protein phosphatase methylesterase 1	AF157028|PPME1|51400|protein phosphatase methylesterase 1	NM_016147|PPME1|51400|protein phosphatase methylesterase 1	AK001381|PPME1|51400|protein phosphatase methylesterase 1
hg18_v1_chr10_-_97311084_97311174	0.203832	UGUGCUU	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1	BC152463|SORBS1|10580|sorbin and SH3 domain containing 1	AK022468|SORBS1|10580|sorbin and SH3 domain containing 1	AK300407|SORBS1|10580|sorbin and SH3 domain containing 1	AK304753|SORBS1|10580|sorbin and SH3 domain containing 1	AL117472|SORBS1|10580|sorbin and SH3 domain containing 1	AM260536|SORBS1|10580|sorbin and SH3 domain containing 1	NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1	NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1
hg18_v1_chr3_+_63403792_63403887	0.20355	UGUGCUU	NM_144642|SYNPR|132204|synaptoporin	AK315958|SYNPR|132204|synaptoporin	AK312465|SYNPR|132204|synaptoporin
hg18_v1_chr3_+_122794859_122794953	0.203493	UGUGCUU	NM_016298|FBXO40|51725|F-box protein 40	AK314400|FBXO40|51725|F-box protein 40	AF204674|FBXO40|51725|F-box protein 40
hg18_v1_chr13_+_75092570_75092570	0.201778	UGUGCUU	AF330045|LMO7|4008|LIM domain 7	NM_005358|LMO7|4008|LIM domain 7
hg18_v1_chr17_-_53920699_53920797	0.200727	UGUGCUU	BC115385|HSF5|124535|heat shock transcription factor family member 5	BC115386|HSF5|124535|heat shock transcription factor family member 5	BC033017|HSF5|124535|heat shock transcription factor family member 5	BC033020|HSF5|124535|heat shock transcription factor family member 5	NM_001080439|HSF5|124535|heat shock transcription factor family member 5
hg18_v1_chr1_-_214663360_214663360	0.200055	UGUGCUU	AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)	AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)	NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)	NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)
hg18_v1_chr12_+_131577229_131577229	0.198475	UGUGCUU	NM_001142641|FBRSL1|57666|fibrosin-like 1
hg18_v1_chr9_+_130913413_130913437	0.198005	UGUGCUU	NM_178000|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4	NM_178001|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4	NM_178003|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4	AK302043|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4
hg18_v1_chr4_-_47966570_47966615	0.197256	UGUGCUU	BC101711|TEC|7006|tec protein tyrosine kinase	BC101713|TEC|7006|tec protein tyrosine kinase	BC143487|TEC|7006|tec protein tyrosine kinase	NM_003215|TEC|7006|tec protein tyrosine kinase
hg18_v1_chr10_-_62373828_62374089	0.197083	UGUGCUU	BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1	AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1	BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1	NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1	AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1
hg18_v1_chr12_-_44670632_44670753	0.196242	UGUGCUU	NM_004719|SCAF11|9169|SR-related CTD-associated factor 11
hg18_v1_chr14_+_77939845_77939845	0.193549	UGUGCUU	AB018286|NRXN3|9369|neurexin 3	BC152457|NRXN3|9369|neurexin 3	NM_004796|NRXN3|9369|neurexin 3
hg18_v1_chrX_-_53466335_53466404	0.189765	UGUGCUU	BC080185|SMC1A|8243|structural maintenance of chromosomes 1A	BC112127|SMC1A|8243|structural maintenance of chromosomes 1A	BC171726|SMC1A|8243|structural maintenance of chromosomes 1A	NM_006306|SMC1A|8243|structural maintenance of chromosomes 1A	AK291921|SMC1A|8243|structural maintenance of chromosomes 1A
hg18_v1_chr7_+_99864348_99864348	0.188177	UGUGCUU	NM_001194990|MEPCE|56257|methylphosphate capping enzyme	NM_001194991|MEPCE|56257|methylphosphate capping enzyme	NM_001194992|MEPCE|56257|methylphosphate capping enzyme
hg18_v1_chr7_-_17946627_17946678	0.18809	UGUGCUU	AL353943|SNX13|23161|sorting nexin 13	AK315135|SNX13|23161|sorting nexin 13	AK294582|SNX13|23161|sorting nexin 13	NM_015132|SNX13|23161|sorting nexin 13
hg18_v1_chr14_+_74418345_74418411	0.187876	UGUGCUU	NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	CR600036|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
hg18_v1_chr3_+_156280129_156280157	0.186634	UGUGCUU	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr7_+_113842284_113842382	0.186622	UGUGCUU	AY144615|FOXP2|93986|forkhead box P2	BC018016|FOXP2|93986|forkhead box P2	NM_001172766|FOXP2|93986|forkhead box P2	NM_014491|FOXP2|93986|forkhead box P2	NM_148898|FOXP2|93986|forkhead box P2	NM_148900|FOXP2|93986|forkhead box P2
hg18_v1_chr5_-_74843561_74843561	0.184396	UGUGCUU	NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
hg18_v1_chr15_+_57517564_57517721	0.184202	UGUGCUU	BC022537|FAM81A|145773|family with sequence similarity 81, member A	NM_152450|FAM81A|145773|family with sequence similarity 81, member A	AK299220|FAM81A|145773|family with sequence similarity 81, member A	AK307975|FAM81A|145773|family with sequence similarity 81, member A
hg18_v1_chr11_-_47502115_47502115	0.183189	UGUGCUU	AB210019|CELF1|10658|CUGBP, Elav-like family member 1	NM_001172639|CELF1|10658|CUGBP, Elav-like family member 1
hg18_v1_chr16_-_88613287_88613514	0.181653	UGUGCUU	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	CR594535|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg18_v1_chr11_-_10672079_10672110	0.181248	UGUGCUU	NM_001100163|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_130385|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr5_+_126140213_126140216	0.180625	UGUGCUU	NM_005573|LMNB1|4001|lamin B1	BC052951|LMNB1|4001|lamin B1
hg18_v1_chr15_-_70399551_70399578	0.17891	UGUGCUU	NM_052840|CELF6|60677|CUGBP, Elav-like family member 6
hg18_v1_chr11_+_118582184_118582203	0.17748	UGUGCUU	X57110|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence	NM_005188|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence
hg18_v1_chr3_+_58266994_58267027	0.177278	UGUGCUU	NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit	NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit
hg18_v1_chr5_+_126140718_126140743	0.176689	UGUGCUU	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg18_v1_chr1_-_67292616_67292667	0.176538	UGUGCUU	AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr7_-_105540210_105540292	0.174799	UGUGCUU	EU831812|SYPL1|6856|synaptophysin-like 1	EU831889|SYPL1|6856|synaptophysin-like 1	BC061887|SYPL1|6856|synaptophysin-like 1	S72481|SYPL1|6856|synaptophysin-like 1	X68194|SYPL1|6856|synaptophysin-like 1	AK292230|SYPL1|6856|synaptophysin-like 1	NM_006754|SYPL1|6856|synaptophysin-like 1
hg18_v1_chr9_-_88159143_88159244	0.174766	UGUGCUU	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6	AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6	CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6	BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6	NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6
hg18_v1_chr22_+_16973399_16973527	0.171595	UGUGCUU	AK056947|TUBA8|51807|tubulin, alpha 8	NM_001193414|TUBA8|51807|tubulin, alpha 8	NM_018943|TUBA8|51807|tubulin, alpha 8
hg18_v1_chr17_+_1129706_1129722	0.167959	UGUGCUU	AB090231|TUSC5|286753|tumor suppressor candidate 5	NM_172367|TUSC5|286753|tumor suppressor candidate 5	BC142615|TUSC5|286753|tumor suppressor candidate 5
hg18_v1_chr15_+_76345577_76345614	0.167519	UGUGCUU	BC031044|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	NM_001130183|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4
hg18_v1_chr15_+_48988156_48988283	0.166825	UGUGCUU	AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit	CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit
hg18_v1_chr8_-_56848423_56848479	0.164415	UGUGCUU	AK308247|TMEM68|137695|transmembrane protein 68	AK056932|TMEM68|137695|transmembrane protein 68	NM_152417|TMEM68|137695|transmembrane protein 68	BC020835|TMEM68|137695|transmembrane protein 68	BC071636|TMEM68|137695|transmembrane protein 68
hg18_v1_chr3_-_157755603_157755671	0.163089	UGUGCUU	CR597465|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg18_v1_chr1_+_242882972_242882976	0.162964	UGUGCUU	NM_016076|PPPDE1|51029|PPPDE peptidase domain containing 1
hg18_v1_chr2_-_64734544_64734559	0.162767	UGUGCUU	D50917|SERTAD2|9792|SERTA domain containing 2	NM_014755|SERTAD2|9792|SERTA domain containing 2	AK311117|SERTAD2|9792|SERTA domain containing 2
hg18_v1_chr11_-_111247415_111247516	0.160781	UGUGCUU	DQ892761|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	DQ896006|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AM393011|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AM393178|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AL136927|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	BC009255|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AF395532|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	CR605278|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AK308025|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AK225261|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AK298811|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	AK025498|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_001077690|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_024740|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)
hg18_v1_chrX_+_133334965_133335121	0.160372	UGUGCUU	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr17_+_39620099_39620107	0.160144	UGUGCUU	AL833899|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_177441|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg18_v1_chr7_-_1562272_1562591	0.15835	UGUGCUU	AK126312|TMEM184A|202915|transmembrane protein 184A	CR625853|TMEM184A|202915|transmembrane protein 184A	BC026694|TMEM184A|202915|transmembrane protein 184A	AK172850|TMEM184A|202915|transmembrane protein 184A	AK313249|TMEM184A|202915|transmembrane protein 184A	AK075043|TMEM184A|202915|transmembrane protein 184A	NM_001097620|TMEM184A|202915|transmembrane protein 184A
hg18_v1_chr3_+_133619193_133619242	0.156861	UGUGCUU	AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13
hg18_v1_chr10_-_21226536_21226536	0.156465	UGUGCUU	NM_006393|NEBL|10529|nebulette	Y16241|NEBL|10529|nebulette
hg18_v1_chr3_+_156280772_156280883	0.156046	UGUGCUU	NM_007289|MME|4311|membrane metallo-endopeptidase	BC101632|MME|4311|membrane metallo-endopeptidase	BC143465|MME|4311|membrane metallo-endopeptidase	BC101658|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr17_+_41327449_41327541	0.155893	UGUGCUU	NM_001123066|MAPT|4137|microtubule-associated protein tau	NM_001123067|MAPT|4137|microtubule-associated protein tau	NM_005910|MAPT|4137|microtubule-associated protein tau	NM_016834|MAPT|4137|microtubule-associated protein tau	NM_016835|MAPT|4137|microtubule-associated protein tau	NM_016841|MAPT|4137|microtubule-associated protein tau
hg18_v1_chr17_+_12509931_12509938	0.153846	UGUGCUU	NM_001146312|MYOCD|93649|myocardin	NM_153604|MYOCD|93649|myocardin	AY764180|MYOCD|93649|myocardin
hg18_v1_chrX_-_110541029_110541029	0.149355	UGUGCUU	AJ003112|DCX|1641|doublecortin	NM_000555|DCX|1641|doublecortin
hg18_v1_chr20_+_43423990_43423990	0.147949	UGUGCUU	NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg18_v1_chrX_-_131375217_131375316	0.146743	UGUGCUU	AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)	AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr3_-_151746970_151747117	0.145871	UGUGCUU	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg18_v1_chrX_+_24621984_24621988	0.145812	UGUGCUU	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit	X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit
hg18_v1_chr3_+_156280604_156280646	0.14541	UGUGCUU	NM_007288|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr6_-_5952631_5952762	0.141763	UGUGCUU	BC042019|NRN1|51299|neuritin 1	NM_016588|NRN1|51299|neuritin 1
hg18_v1_chr6_-_3390197_3390216	0.14131	UGUGCUU	BC128580|SLC22A23|63027|solute carrier family 22, member 23	BC128581|SLC22A23|63027|solute carrier family 22, member 23	BC038748|SLC22A23|63027|solute carrier family 22, member 23	NM_021945|SLC22A23|63027|solute carrier family 22, member 23
hg18_v1_chr2_-_157890400_157890661	0.14025	UGUGCUU	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg18_v1_chr14_+_49429474_49429487	0.135451	UGUGCUU	NM_001663|ARF6|382|ADP-ribosylation factor 6
hg18_v1_chr8_-_30789865_30789922	0.135154	UGUGCUU	CR624064|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme	NM_001009552|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme
hg18_v1_chr3_-_116348780_116348829	0.134791	UGUGCUU	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20	BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20	BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr12_+_77963563_77963602	0.134299	UGUGCUU	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg18_v1_chr10_+_76541351_76541495	0.133779	UGUGCUU	BC080593|SAMD8|142891|sterile alpha motif domain containing 8	NM_001174156|SAMD8|142891|sterile alpha motif domain containing 8	NM_144660|SAMD8|142891|sterile alpha motif domain containing 8	AK057811|SAMD8|142891|sterile alpha motif domain containing 8
hg18_v1_chr1_-_153213483_153213582	0.133568	UGUGCUU	AK315842|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	AK292143|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	NM_001130041|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	NM_003029|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1
hg18_v1_chr17_-_3743085_3743099	0.130911	UGUGCUU	AL136576|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha	NM_032294|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha	NM_172207|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg18_v1_chrX_+_40829802_40829831	0.12922	UGUGCUU	NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked	NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked
hg18_v1_chr2_+_208102860_208102916	0.128672	UGUGCUU	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	CR621261|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr11_+_58668827_58668884	0.128405	UGUGCUU	NM_022074|FAM111A|63901|family with sequence similarity 111, member A	NM_198847|FAM111A|63901|family with sequence similarity 111, member A	AK291453|FAM111A|63901|family with sequence similarity 111, member A	BC071759|FAM111A|63901|family with sequence similarity 111, member A	AK092061|FAM111A|63901|family with sequence similarity 111, member A
hg18_v1_chr14_-_72995032_72995056	0.126845	UGUGCUU	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr11_-_10630408_10630498	0.126683	UGUGCUU	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr12_-_117295095_117295132	0.126591	UGUGCUU	NM_016281|TAOK3|51347|TAO kinase 3
hg18_v1_chr8_-_57286412_57286419	0.126291	UGUGCUU	AK296933|PLAG1|5324|pleiomorphic adenoma gene 1	AK313663|PLAG1|5324|pleiomorphic adenoma gene 1	NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1	NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1	NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1
hg18_v1_chr3_+_10265169_10265182	0.125805	UGUGCUU	NM_014760|TATDN2|9797|TatD DNase domain containing 2
hg18_v1_chr11_+_61204392_61204523	0.125058	UGUGCUU	BC150176|DAGLA|747|diacylglycerol lipase, alpha	BC150195|DAGLA|747|diacylglycerol lipase, alpha	AB014559|DAGLA|747|diacylglycerol lipase, alpha	BC152453|DAGLA|747|diacylglycerol lipase, alpha	NM_006133|DAGLA|747|diacylglycerol lipase, alpha
hg18_v1_chr4_+_115762971_115762971	0.123518	UGUGCUU	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg18_v1_chrX_+_119621771_119621862	0.12248	UGUGCUU	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr11_+_58666749_58667024	0.1218	UGUGCUU	AK092237|FAM111A|63901|family with sequence similarity 111, member A	NM_001142519|FAM111A|63901|family with sequence similarity 111, member A	NM_001142520|FAM111A|63901|family with sequence similarity 111, member A	NM_001142521|FAM111A|63901|family with sequence similarity 111, member A
hg18_v1_chr12_-_22378833_22379061	0.12159	UGUGCUU	BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
hg18_v1_chr10_-_59697636_59697699	0.121006	UGUGCUU	BC016612|IPMK|253430|inositol polyphosphate multikinase	BC065709|IPMK|253430|inositol polyphosphate multikinase	NM_152230|IPMK|253430|inositol polyphosphate multikinase
hg18_v1_chr5_+_138705416_138705443	0.119678	UGUGCUU	NM_016480|PAIP2|51247|poly(A) binding protein interacting protein 2	AK314672|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr5_+_143530588_143530629	0.119074	UGUGCUU	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16	CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16	NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16
hg18_v1_chr21_+_43903803_43903969	0.118689	UGUGCUU	BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)
hg18_v1_chr4_-_40212670_40212760	0.11837	UGUGCUU	AK000280|RBM47|54502|RNA binding motif protein 47	NM_019027|RBM47|54502|RNA binding motif protein 47
hg18_v1_chr2_+_165860528_165860528	0.118128	UGUGCUU	NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr10_+_96152175_96152177	0.118011	UGUGCUU	NM_015188|TBC1D12|23232|TBC1 domain family, member 12
hg18_v1_chrX_+_49573952_49574021	0.116992	UGUGCUU	AK092049|CLCN5|1184|chloride channel 5	NM_001127898|CLCN5|1184|chloride channel 5	NM_001127899|CLCN5|1184|chloride channel 5	AK056560|CLCN5|1184|chloride channel 5
hg18_v1_chrX_+_68752635_68752685	0.116569	UGUGCUU	AF040628|EDA|1896|ectodysplasin A	AF060999|EDA|1896|ectodysplasin A	AF061189|EDA|1896|ectodysplasin A	AF061190|EDA|1896|ectodysplasin A	AF061191|EDA|1896|ectodysplasin A	AF061192|EDA|1896|ectodysplasin A	AF061193|EDA|1896|ectodysplasin A	AF061194|EDA|1896|ectodysplasin A	NM_001005609|EDA|1896|ectodysplasin A	NM_001005610|EDA|1896|ectodysplasin A	NM_001005612|EDA|1896|ectodysplasin A	NM_001005613|EDA|1896|ectodysplasin A	NM_001399|EDA|1896|ectodysplasin A	U59228|EDA|1896|ectodysplasin A	BC126143|EDA|1896|ectodysplasin A	BC144049|EDA|1896|ectodysplasin A	BC144051|EDA|1896|ectodysplasin A
hg18_v1_chr12_+_21545965_21546006	0.115049	UGUGCUU	NM_016072|GOLT1B|51026|golgi transport 1B	AK311331|GOLT1B|51026|golgi transport 1B	AF068292|GOLT1B|51026|golgi transport 1B	AK309736|GOLT1B|51026|golgi transport 1B
hg18_v1_chr11_+_58103151_58103167	0.114677	UGUGCUU	BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)	NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)	NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)
hg18_v1_chr20_+_39199542_39199662	0.111003	UGUGCUU	NM_002660|PLCG1|5335|phospholipase C, gamma 1	NM_182811|PLCG1|5335|phospholipase C, gamma 1	BC136466|PLCG1|5335|phospholipase C, gamma 1	BC144136|PLCG1|5335|phospholipase C, gamma 1	M34667|PLCG1|5335|phospholipase C, gamma 1
hg18_v1_chr19_-_4351470_4351637	0.110992	UGUGCUU	BC001270|SH3GL1|6455|SH3-domain GRB2-like 1	NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1	AK315450|SH3GL1|6455|SH3-domain GRB2-like 1	BC098565|SH3GL1|6455|SH3-domain GRB2-like 1	AK299166|SH3GL1|6455|SH3-domain GRB2-like 1
hg18_v1_chr5_+_155686333_155686344	0.110971	UGUGCUU	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg18_v1_chr22_+_43938389_43938482	0.106157	UGUGCUU	NM_007172|NUP50|10762|nucleoporin 50kDa
hg18_v1_chr4_-_17632456_17632672	0.105457	UGUGCUU	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like	BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like	AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like	NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like	NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like
hg18_v1_chr10_-_105208634_105208637	0.105117	UGUGCUU	BC036193|CALHM1|255022|calcium homeostasis modulator 1	BC036208|CALHM1|255022|calcium homeostasis modulator 1	NM_001001412|CALHM1|255022|calcium homeostasis modulator 1
hg18_v1_chr14_+_68935133_68935164	0.103377	UGUGCUU	AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9	NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9	AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9
hg18_v1_chr13_-_48916144_48916221	0.101686	UGUGCUU	AY211923|CAB39L|81617|calcium binding protein 39-like	AY288977|CAB39L|81617|calcium binding protein 39-like	BX647518|CAB39L|81617|calcium binding protein 39-like	NM_001079670|CAB39L|81617|calcium binding protein 39-like
hg18_v1_chr7_-_105539954_105540007	0.0987371	UGUGCUU	BC020938|SYPL1|6856|synaptophysin-like 1	BC016835|SYPL1|6856|synaptophysin-like 1	NM_182715|SYPL1|6856|synaptophysin-like 1
hg18_v1_chrX_-_19898302_19898302	0.098085	UGUGCUU	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg18_v1_chr6_-_100069966_100070015	0.0976996	UGUGCUU	CR614890|USP45|85015|ubiquitin specific peptidase 45	NM_001080481|USP45|85015|ubiquitin specific peptidase 45	AK310643|USP45|85015|ubiquitin specific peptidase 45
hg18_v1_chr1_-_114156429_114156620	0.0969279	UGUGCUU	AK002082|RSBN1|54665|round spermatid basic protein 1	BC026155|RSBN1|54665|round spermatid basic protein 1	NM_018364|RSBN1|54665|round spermatid basic protein 1	AK292552|RSBN1|54665|round spermatid basic protein 1
hg18_v1_chr13_+_41744255_41744316	0.0963443	UGUGCUU	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11	NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11
hg18_v1_chrX_-_133876914_133876962	0.0962877	UGUGCUU	AK316570|MOSPD1|56180|motile sperm domain containing 1	AF086333|MOSPD1|56180|motile sperm domain containing 1	AK307196|MOSPD1|56180|motile sperm domain containing 1	BC005700|MOSPD1|56180|motile sperm domain containing 1	AK299074|MOSPD1|56180|motile sperm domain containing 1	AL137163|MOSPD1|56180|motile sperm domain containing 1	NM_019556|MOSPD1|56180|motile sperm domain containing 1
hg18_v1_chr10_-_104463947_104464228	0.0958814	UGUGCUU	U07151|ARL3|403|ADP-ribosylation factor-like 3	BC009841|ARL3|403|ADP-ribosylation factor-like 3	AK312525|ARL3|403|ADP-ribosylation factor-like 3	NM_004311|ARL3|403|ADP-ribosylation factor-like 3
hg18_v1_chr12_-_110521743_110521862	0.0941763	UGUGCUU	BC111757|ATXN2|6311|ataxin 2	BC114546|ATXN2|6311|ataxin 2	NM_002973|ATXN2|6311|ataxin 2	U70323|ATXN2|6311|ataxin 2
hg18_v1_chr6_-_11152340_11152793	0.0935449	UGUGCUU	AK000341|ELOVL2|54898|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	BC060809|ELOVL2|54898|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	BC050278|ELOVL2|54898|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	NM_017770|ELOVL2|54898|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
hg18_v1_chr19_+_16083434_16083514	0.0932327	UGUGCUU	AK025165|RAB8A|4218|RAB8A, member RAS oncogene family	NM_005370|RAB8A|4218|RAB8A, member RAS oncogene family
hg18_v1_chr1_-_67668686_67668724	0.093189	UGUGCUU	NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1	NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1	NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1	NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1
hg18_v1_chr3_+_88270951_88270951	0.0927087	UGUGCUU	AF543494|ZNF654|55279|zinc finger protein 654	NM_018293|ZNF654|55279|zinc finger protein 654
hg18_v1_chr18_+_70314315_70314561	0.0918488	UGUGCUU	NM_018235|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chrX_+_119622570_119622611	0.0909476	UGUGCUU	NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1	AK294834|MCTS1|28985|malignant T cell amplified sequence 1
hg18_v1_chr5_-_132327162_132327254	0.0903406	UGUGCUU	AF197927|AFF4|27125|AF4/FMR2 family, member 4	AK055638|AFF4|27125|AF4/FMR2 family, member 4	BC040454|AFF4|27125|AF4/FMR2 family, member 4	BC100287|AFF4|27125|AF4/FMR2 family, member 4	AB209547|AFF4|27125|AF4/FMR2 family, member 4	AK307407|AFF4|27125|AF4/FMR2 family, member 4	NM_014423|AFF4|27125|AF4/FMR2 family, member 4
hg18_v1_chr1_-_154737130_154737155	0.0884243	UGUGCUU	BC054520|MEF2D|4209|myocyte enhancer factor 2D	NM_005920|MEF2D|4209|myocyte enhancer factor 2D	AK308641|MEF2D|4209|myocyte enhancer factor 2D
hg18_v1_chr3_+_142143329_142143586	0.0873704	UGUGCUU	NM_001104647|SLC25A36|55186|solute carrier family 25, member 36	NM_018155|SLC25A36|55186|solute carrier family 25, member 36	AK001480|SLC25A36|55186|solute carrier family 25, member 36	AL136803|SLC25A36|55186|solute carrier family 25, member 36	BC014064|SLC25A36|55186|solute carrier family 25, member 36	BC019859|SLC25A36|55186|solute carrier family 25, member 36	BC036272|SLC25A36|55186|solute carrier family 25, member 36	AK296785|SLC25A36|55186|solute carrier family 25, member 36	EU831411|SLC25A36|55186|solute carrier family 25, member 36	EU831504|SLC25A36|55186|solute carrier family 25, member 36
hg18_v1_chr1_-_35097232_35097256	0.0861227	UGUGCUU	NM_001164824|C1orf212|113444|chromosome 1 open reading frame 212	BC034598|C1orf212|113444|chromosome 1 open reading frame 212
hg18_v1_chr3_+_50248649_50248650	0.0848408	UGUGCUU	NM_002070|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg18_v1_chr12_-_120220493_120220493	0.0829428	UGUGCUU	AF287630|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF287631|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_006549|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_153499|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_153500|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_172214|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_172215|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_172216|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg18_v1_chr1_-_118273728_118273824	0.0829316	UGUGCUU	AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2	BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2	CR601966|GDAP2|54834|ganglioside induced differentiation associated protein 2	NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2	NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2
hg18_v1_chrX_+_46656543_46657215	0.0822829	UGUGCUU	AK291220|PHF16|9767|PHD finger protein 16	NM_001077445|PHF16|9767|PHD finger protein 16	D86969|PHF16|9767|PHD finger protein 16	NM_014735|PHF16|9767|PHD finger protein 16	BC113880|PHF16|9767|PHD finger protein 16	BC114487|PHF16|9767|PHD finger protein 16	AF127774|PHF16|9767|PHD finger protein 16
hg18_v1_chr14_+_54588066_54588121	0.0812733	UGUGCUU	CR610161|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like	NM_144578|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like	AK315501|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like
hg18_v1_chr7_-_92301147_92301166	0.0810137	UGUGCUU	BC052264|CDK6|1021|cyclin-dependent kinase 6	NM_001259|CDK6|1021|cyclin-dependent kinase 6
hg18_v1_chr7_-_112515068_112515084	0.0798996	UGUGCUU	NM_001146265|GPR85|54329|G protein-coupled receptor 85	NM_018970|GPR85|54329|G protein-coupled receptor 85
hg18_v1_chr1_-_160648429_160648551	0.0795699	UGUGCUU	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg18_v1_chr3_-_126721739_126721748	0.0775752	UGUGCUU	NM_003794|SNX4|8723|sorting nexin 4
hg18_v1_chr3_-_14558591_14558591	0.07713	UGUGCUU	NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2
hg18_v1_chrX_-_119487183_119487261	0.0762612	UGUGCUU	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2	S79873|LAMP2|3920|lysosomal-associated membrane protein 2	U36336|LAMP2|3920|lysosomal-associated membrane protein 2	X77196|LAMP2|3920|lysosomal-associated membrane protein 2	AK295038|LAMP2|3920|lysosomal-associated membrane protein 2	NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2	NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2	NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr12_+_120840829_120840900	0.0760671	UGUGCUU	NM_001178003|WDR66|144406|WD repeat domain 66	NM_144668|WDR66|144406|WD repeat domain 66	BC028421|WDR66|144406|WD repeat domain 66	BC036233|WDR66|144406|WD repeat domain 66
hg18_v1_chr12_-_107516022_107516053	0.0749101	UGUGCUU	AY358389|TMEM119|338773|transmembrane protein 119	NM_181724|TMEM119|338773|transmembrane protein 119
hg18_v1_chr4_-_1692776_1692883	0.0737694	UGUGCUU	BC126370|TMEM129|92305|transmembrane protein 129	BC009331|TMEM129|92305|transmembrane protein 129	BC018921|TMEM129|92305|transmembrane protein 129	NM_001127266|TMEM129|92305|transmembrane protein 129	NM_138385|TMEM129|92305|transmembrane protein 129
hg18_v1_chr17_+_23686674_23686986	0.0735795	UGUGCUU	NM_021137|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	CR621421|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	BC003694|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK300584|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK312387|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	CR608286|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	BC001643|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	BC001949|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	CR590463|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	CR621837|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	M80783|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg18_v1_chr5_-_74843204_74843247	0.0712527	UGUGCUU	AK091851|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein	AK292087|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein	NM_005713|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein	NM_031361|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
hg18_v1_chr17_-_60483346_60483381	0.0705339	UGUGCUU	AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg18_v1_chr1_-_155834357_155834493	0.0703049	UGUGCUU	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg18_v1_chr14_+_89933055_89933098	0.0691403	UGUGCUU	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg18_v1_chr12_-_24993548_24993659	0.0690799	UGUGCUU	AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg18_v1_chr11_+_118525508_118525508	0.0672616	UGUGCUU	AK289830|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4	NM_001142505|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4
hg18_v1_chr11_-_8942531_8942572	0.0672611	UGUGCUU	AY359069|TMEM9B|56674|TMEM9 domain family, member B	CR609980|TMEM9B|56674|TMEM9 domain family, member B	CR610059|TMEM9B|56674|TMEM9 domain family, member B	CR605470|TMEM9B|56674|TMEM9 domain family, member B	NM_020644|TMEM9B|56674|TMEM9 domain family, member B
hg18_v1_chr2_+_135392857_135392877	0.0662018	UGUGCUU	AK294889|CCNT2|905|cyclin T2	AF048731|CCNT2|905|cyclin T2	NM_001241|CCNT2|905|cyclin T2	NM_058241|CCNT2|905|cyclin T2	AK292913|CCNT2|905|cyclin T2	BC114366|CCNT2|905|cyclin T2
hg18_v1_chr7_+_87401368_87401670	0.0661792	UGUGCUU	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg18_v1_chr2_-_86704470_86704518	0.0658876	UGUGCUU	NM_001198951|RNF103|7844|ring finger protein 103	NM_001198952|RNF103|7844|ring finger protein 103	NM_005667|RNF103|7844|ring finger protein 103
hg18_v1_chrX_-_10504852_10504957	0.0658025	UGUGCUU	AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr1_-_153209625_153209872	0.0650248	UGUGCUU	AB451255|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	AB451379|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	AK225332|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	BX647136|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	U73377|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	BC011813|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	BC017283|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	AK296786|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	AK096169|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	BC033925|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	BX647149|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	NM_001130040|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	NM_183001|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1
hg18_v1_chr3_+_156280338_156280398	0.0647095	UGUGCUU	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr12_-_30740072_30740195	0.0640889	UGUGCUU	NM_006390|IPO8|10526|importin 8
hg18_v1_chr4_-_176971175_176971175	0.0635244	UGUGCUU	BC032904|GPM6A|2823|glycoprotein M6A	NM_201591|GPM6A|2823|glycoprotein M6A
hg18_v1_chr7_+_99865189_99865333	0.0627244	UGUGCUU	BC016396|MEPCE|56257|methylphosphate capping enzyme	NM_019606|MEPCE|56257|methylphosphate capping enzyme
hg18_v1_chr1_+_151897768_151897816	0.0624696	UGUGCUU	NM_012437|SNAPIN|23557|SNAP-associated protein	AK024555|SNAPIN|23557|SNAP-associated protein
hg18_v1_chr7_-_123175947_123176473	0.0610001	UGUGCUU	AM295156|WASL|8976|Wiskott-Aldrich syndrome-like	BC013776|WASL|8976|Wiskott-Aldrich syndrome-like	AK289795|WASL|8976|Wiskott-Aldrich syndrome-like	D88460|WASL|8976|Wiskott-Aldrich syndrome-like	CR749438|WASL|8976|Wiskott-Aldrich syndrome-like	BC028602|WASL|8976|Wiskott-Aldrich syndrome-like	BC052955|WASL|8976|Wiskott-Aldrich syndrome-like	NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like
hg18_v1_chr14_-_56805367_56805390	0.0606501	UGUGCUU	NM_006544|EXOC5|10640|exocyst complex component 5	AK312523|EXOC5|10640|exocyst complex component 5
hg18_v1_chr9_-_71564675_71564758	0.0594075	UGUGCUU	AL832683|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1	BC053622|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1	NM_001099666|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1
hg18_v1_chr11_-_118757574_118757645	0.0587803	UGUGCUU	AK057225|USP2|9099|ubiquitin specific peptidase 2	BC041366|USP2|9099|ubiquitin specific peptidase 2	NM_004205|USP2|9099|ubiquitin specific peptidase 2
hg18_v1_chr2_-_25328452_25328968	0.0585824	UGUGCUU	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha
hg18_v1_chr8_-_102033510_102033532	0.0574241	UGUGCUU	NM_145690|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg18_v1_chr12_-_69317441_69317486	0.0545317	UGUGCUU	AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr12_-_15833617_15833776	0.0530316	UGUGCUU	AK304860|EPS8|2059|epidermal growth factor receptor pathway substrate 8	NM_004447|EPS8|2059|epidermal growth factor receptor pathway substrate 8
hg18_v1_chr5_-_133996362_133996431	0.0482119	UGUGCUU	BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	CR601141|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	CR618910|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	CR618571|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)	NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)
hg18_v1_chr21_+_34367678_34367745	0.0461654	UGUGCUU	AY061855|MRPS6|64968|mitochondrial ribosomal protein S6	NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6	NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg18_v1_chr7_+_56099410_56099460	0.045441	UGUGCUU	NM_001042469|SUMF2|25870|sulfatase modifying factor 2	NM_001042470|SUMF2|25870|sulfatase modifying factor 2	NM_001130069|SUMF2|25870|sulfatase modifying factor 2	NM_001146333|SUMF2|25870|sulfatase modifying factor 2	NM_015411|SUMF2|25870|sulfatase modifying factor 2	AK075477|SUMF2|25870|sulfatase modifying factor 2	AK300488|SUMF2|25870|sulfatase modifying factor 2	BC111092|SUMF2|25870|sulfatase modifying factor 2
hg18_v1_chr5_-_137396677_137396702	0.0447259	UGUGCUU	NM_001101800|FAM13B|51306|family with sequence similarity 13, member B	NM_001101801|FAM13B|51306|family with sequence similarity 13, member B	NM_016603|FAM13B|51306|family with sequence similarity 13, member B
hg18_v1_chr12_+_32151351_32151530	0.0417884	UGUGCUU	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg18_v1_chr6_+_31234093_31234316	0.0416634	UGUGCUU	NM_001077511|TCF19|6941|transcription factor 19	NM_007109|TCF19|6941|transcription factor 19	BX647174|TCF19|6941|transcription factor 19	BC044632|TCF19|6941|transcription factor 19
hg18_v1_chrX_-_151749915_151749959	0.0416362	UGUGCUU	CR593366|CETN2|1069|centrin, EF-hand protein, 2	AK311940|CETN2|1069|centrin, EF-hand protein, 2	BC013873|CETN2|1069|centrin, EF-hand protein, 2	BC005334|CETN2|1069|centrin, EF-hand protein, 2	NM_004344|CETN2|1069|centrin, EF-hand protein, 2	X72964|CETN2|1069|centrin, EF-hand protein, 2
hg18_v1_chrX_-_131451675_131451753	0.0411454	UGUGCUU	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr14_-_33489708_33490092	0.0409385	UGUGCUU	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)	BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)	BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)	BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)	BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)	BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)	CR620175|EGLN3|112399|egl nine homolog 3 (C. elegans)	CR611178|EGLN3|112399|egl nine homolog 3 (C. elegans)	AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)	AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)	AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)	AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)	NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)	CR591195|EGLN3|112399|egl nine homolog 3 (C. elegans)	CR592368|EGLN3|112399|egl nine homolog 3 (C. elegans)	CR608810|EGLN3|112399|egl nine homolog 3 (C. elegans)	CR613124|EGLN3|112399|egl nine homolog 3 (C. elegans)	CR623500|EGLN3|112399|egl nine homolog 3 (C. elegans)
hg18_v1_chr8_+_144751216_144751217	0.0405139	UGUGCUU	NM_032862|TIGD5|84948|tigger transposable element derived 5	AK223583|TIGD5|84948|tigger transposable element derived 5
hg18_v1_chr11_-_102468113_102468153	0.0402361	UGUGCUU	AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
hg18_v1_chr3_+_198079105_198079153	0.0390794	UGUGCUU	AK302305|SENP5|205564|SUMO1/sentrin specific peptidase 5	NM_152699|SENP5|205564|SUMO1/sentrin specific peptidase 5	AK313764|SENP5|205564|SUMO1/sentrin specific peptidase 5
hg18_v1_chr11_-_118167108_118167181	0.0386389	UGUGCUU	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr11_+_93501708_93501779	0.0380175	UGUGCUU	BC016931|PANX1|24145|pannexin 1	NM_015368|PANX1|24145|pannexin 1	AF398509|PANX1|24145|pannexin 1	AK313074|PANX1|24145|pannexin 1
hg18_v1_chr3_-_66633534_66633551	0.0361732	UGUGCUU	AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1
hg18_v1_chr2_+_165804157_165804200	0.0350871	UGUGCUU	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr5_-_54639158_54639279	0.0349874	UGUGCUU	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg18_v1_chr3_+_70068440_70068563	0.0348452	UGUGCUU	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr9_+_111582317_111582556	0.0348335	UGUGCUU	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	NM_053016|PALM2|114299|paralemmin 2	NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	AJ312216|PALM2|114299|paralemmin 2	AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough
hg18_v1_chr12_-_52939636_52939640	0.0319006	UGUGCUU	NM_001127321|CBX5|23468|chromobox homolog 5
hg18_v1_chr17_+_33761234_33761544	0.0316472	UGUGCUU	NM_014598|SOCS7|30837|suppressor of cytokine signaling 7	BC121030|SOCS7|30837|suppressor of cytokine signaling 7	BC121031|SOCS7|30837|suppressor of cytokine signaling 7	BC128607|SOCS7|30837|suppressor of cytokine signaling 7
hg18_v1_chr9_-_98368913_98369023	0.0306913	UGUGCUU	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr14_-_51605695_51605775	0.0289733	UGUGCUU	NM_007361|NID2|22795|nidogen 2 (osteonidogen)
hg18_v1_chr15_+_56850681_56850717	0.0287435	UGUGCUU	AL833610|FAM63B|54629|family with sequence similarity 63, member B	NM_001040450|FAM63B|54629|family with sequence similarity 63, member B	NM_001040453|FAM63B|54629|family with sequence similarity 63, member B
hg18_v1_chr5_-_156705250_156705306	0.0279703	UGUGCUU	AK289701|FNDC9|408263|fibronectin type III domain containing 9	BC022570|FNDC9|408263|fibronectin type III domain containing 9	NM_001001343|FNDC9|408263|fibronectin type III domain containing 9
hg18_v1_chr3_+_168936125_168936242	0.0272805	UGUGCUU	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1	AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1	BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1	NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1	CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1	Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1
hg18_v1_chr22_-_40941254_40941388	0.027251	UGUGCUU	NM_005650|TCF20|6942|transcription factor 20 (AR1)	NM_181492|TCF20|6942|transcription factor 20 (AR1)
hg18_v1_chr5_-_131375148_131375247	0.0258941	UGUGCUU	AB020644|ACSL6|23305|acyl-CoA synthetase long-chain family member 6	AK294291|ACSL6|23305|acyl-CoA synthetase long-chain family member 6	NM_001009185|ACSL6|23305|acyl-CoA synthetase long-chain family member 6	NM_015256|ACSL6|23305|acyl-CoA synthetase long-chain family member 6
hg18_v1_chr2_+_238265519_238265573	0.0247903	UGUGCUU	BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1
hg18_v1_chr11_-_111247190_111247267	0.0230614	UGUGCUU	NM_001077691|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_001077692|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)
hg18_v1_chrX_-_85189194_85189221	0.0229151	UGUGCUU	AK299323|CHM|1121|choroideremia (Rab escort protein 1)	BC032237|CHM|1121|choroideremia (Rab escort protein 1)	BC130494|CHM|1121|choroideremia (Rab escort protein 1)	BC130496|CHM|1121|choroideremia (Rab escort protein 1)	AK291160|CHM|1121|choroideremia (Rab escort protein 1)	AK312443|CHM|1121|choroideremia (Rab escort protein 1)	NM_000390|CHM|1121|choroideremia (Rab escort protein 1)	NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)	X78121|CHM|1121|choroideremia (Rab escort protein 1)
hg18_v1_chr9_-_26995649_26995690	0.0228097	UGUGCUU	BC126156|LRRC19|64922|leucine rich repeat containing 19	BC136298|LRRC19|64922|leucine rich repeat containing 19	AK222987|LRRC19|64922|leucine rich repeat containing 19	AK024955|LRRC19|64922|leucine rich repeat containing 19	BC056252|LRRC19|64922|leucine rich repeat containing 19	NM_022901|LRRC19|64922|leucine rich repeat containing 19
hg18_v1_chr5_-_171366481_171366481	0.0224821	UGUGCUU	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11	NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11	NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11	NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11
hg18_v1_chr12_-_65359148_65359191	0.0222582	UGUGCUU	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr13_-_98428244_98428338	0.0214681	UGUGCUU	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg18_v1_chr8_+_55691179_55691232	0.0213419	UGUGCUU	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)	DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)
hg18_v1_chrX_-_10761729_10761729	0.0205619	UGUGCUU	NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr20_-_39428911_39428911	0.0204839	UGUGCUU	AB089149|EMILIN3|90187|elastin microfibril interfacer 3	NM_052846|EMILIN3|90187|elastin microfibril interfacer 3
hg18_v1_chr10_+_102662315_102662315	0.0189964	UGUGCUU	AF460991|FAM178A|55719|family with sequence similarity 178, member A	AF460992|FAM178A|55719|family with sequence similarity 178, member A	NM_001136123|FAM178A|55719|family with sequence similarity 178, member A	NM_018121|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chr1_+_154386358_154386433	0.018636	UGUGCUU	NM_001193301|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	AY358531|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg18_v1_chr11_+_119712827_119712827	0.0183593	UGUGCUU	BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12
hg18_v1_chr12_+_12761085_12761702	0.0182586	UGUGCUU	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg18_v1_chr15_+_46410908_46411004	0.0179366	UGUGCUU	NM_001025248|DUT|1854|deoxyuridine triphosphatase	NM_001025249|DUT|1854|deoxyuridine triphosphatase	AK000629|DUT|1854|deoxyuridine triphosphatase	BC070339|DUT|1854|deoxyuridine triphosphatase	BC110377|DUT|1854|deoxyuridine triphosphatase	AK298464|DUT|1854|deoxyuridine triphosphatase	U90223|DUT|1854|deoxyuridine triphosphatase	CR613093|DUT|1854|deoxyuridine triphosphatase
hg18_v1_chr1_-_45249603_45249619	0.0173133	UGUGCUU	AK301124|HECTD3|79654|HECT domain containing 3	NM_024602|HECTD3|79654|HECT domain containing 3
hg18_v1_chr18_+_70317802_70317802	0.0170346	UGUGCUU	NM_001168499|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg18_v1_chr15_+_49831030_49831200	0.0163064	UGUGCUU	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg18_v1_chr8_-_124123772_124123828	0.0158541	UGUGCUU	NM_001134671|DERL1|79139|Der1-like domain family, member 1	NM_024295|DERL1|79139|Der1-like domain family, member 1
hg18_v1_chr11_-_76862197_76862764	0.0147067	UGUGCUU	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1
hg18_v1_chr4_+_148621518_148621533	0.0141253	UGUGCUU	NM_001166055|EDNRA|1909|endothelin receptor type A	NM_001957|EDNRA|1909|endothelin receptor type A	AK315931|EDNRA|1909|endothelin receptor type A
hg18_v1_chr11_-_2970153_2970198	0.0128765	UGUGCUU	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg18_v1_chr15_-_38420414_38420459	0.0125081	UGUGCUU	AK125329|C15orf52|388115|chromosome 15 open reading frame 52	NM_207380|C15orf52|388115|chromosome 15 open reading frame 52
hg18_v1_chr19_-_60461732_60461849	0.012274	UGUGCUU	NM_014931|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1
hg18_v1_chr8_+_96215118_96215124	0.0121861	UGUGCUU	NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg18_v1_chr2_+_165858586_165858586	0.0117887	UGUGCUU	NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr19_-_19175064_19175237	0.0115733	UGUGCUU	AY101377|NR2C2AP|126382|nuclear receptor 2C2-associated protein	CR594611|NR2C2AP|126382|nuclear receptor 2C2-associated protein	AK301426|NR2C2AP|126382|nuclear receptor 2C2-associated protein	BC057837|NR2C2AP|126382|nuclear receptor 2C2-associated protein	NM_176880|NR2C2AP|126382|nuclear receptor 2C2-associated protein
hg18_v1_chr9_-_34448477_34448577	0.0115497	UGUGCUU	AK299882|C9orf25|203259|chromosome 9 open reading frame 25	AK096350|C9orf25|203259|chromosome 9 open reading frame 25	AK123887|C9orf25|203259|chromosome 9 open reading frame 25	AK294054|C9orf25|203259|chromosome 9 open reading frame 25	BC041009|C9orf25|203259|chromosome 9 open reading frame 25	NM_001184940|C9orf25|203259|chromosome 9 open reading frame 25	NM_001184941|C9orf25|203259|chromosome 9 open reading frame 25	NM_001184942|C9orf25|203259|chromosome 9 open reading frame 25	NM_001184943|C9orf25|203259|chromosome 9 open reading frame 25	NM_001184944|C9orf25|203259|chromosome 9 open reading frame 25	NM_001184945|C9orf25|203259|chromosome 9 open reading frame 25	NM_147202|C9orf25|203259|chromosome 9 open reading frame 25
hg18_v1_chr21_+_44169706_44169706	0.0110959	UGUGCUU	AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3
hg18_v1_chr8_+_22280703_22280730	0.00945372	UGUGCUU	NM_001128431|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14	NM_001135154|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14	NM_015359|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14
hg18_v1_chrX_+_64625339_64625430	0.00804293	UGUGCUU	BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B	NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B	BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B
hg18_v1_chr17_-_38427957_38428002	0.00714009	UGUGCUU	AK290460|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)	NM_006373|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)
hg18_v1_chr7_+_882704_882755	0.00697605	UGUGCUU	NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)
hg18_v1_chr17_-_69151821_69151821	0.00592389	UGUGCUU	NM_001144952|SDK2|54549|sidekick homolog 2 (chicken)
hg18_v1_chr8_-_119703361_119703416	0.00450577	UGUGCUU	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12	NM_207506|SAMD12|401474|sterile alpha motif domain containing 12	AK311704|SAMD12|401474|sterile alpha motif domain containing 12
hg18_v1_chr15_+_42616557_42616580	0.00412039	UGUGCUU	NM_003758|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J
hg18_v1_chr1_+_40278841_40278887	0.00334384	UGUGCUU	NM_001105530|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)	NM_006367|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)
hg18_v1_chr14_-_98807574_98807712	0.00213498	UGUGCUU	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)
