Motif ID: LHX3,4.p2

Z-value: 1.614


Transcription factors associated with LHX3,4.p2:

Gene SymbolEntrez IDGene Name
LHX3 8022 LIM homeobox 3
LHX4 89884 LIM homeobox 4

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
LHX3chr9_-_139094886,
chr9_-_139096954
-0.155.8e-01Click!


Activity profile for motif LHX3,4.p2.

activity profile for motif LHX3,4.p2


Sorted Z-values histogram for motif LHX3,4.p2

Sorted Z-values for motif LHX3,4.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of LHX3,4.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_+_198608216 2.027 PTPRC
protein tyrosine phosphatase, receptor type, C
chr6_+_12717036 1.920 NM_001242648
NM_030948
PHACTR1

phosphatase and actin regulator 1

chr16_+_12058963 1.698 NM_001192
TNFRSF17
tumor necrosis factor receptor superfamily, member 17
chr10_+_91152321 1.610 NM_001548
IFIT1
interferon-induced protein with tetratricopeptide repeats 1
chr2_-_31352489 1.605 NM_001253827
GALNT14
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
chr1_-_197552304 1.591 DENND1B
DENN/MADD domain containing 1B
chr1_-_93342706 1.403 NM_001252271
FAM69A
family with sequence similarity 69, member A
chr14_-_106926393 1.245 IGHA1
IGHG1
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
chr3_-_57234279 1.230 NM_003865
HESX1
HESX homeobox 1
chr11_-_58343308 1.214 NM_004811
LPXN
leupaxin
chr7_-_25268057 1.186 NM_022150
NPVF
neuropeptide VF precursor
chr5_-_1882764 1.150 NM_016358
IRX4
iroquois homeobox 4
chr5_+_67586466 1.143 NM_181504
PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr20_-_6104056 1.096 NM_017671
FERMT1
fermitin family member 1
chr11_+_22689653 1.019 NM_177553
GAS2
growth arrest-specific 2
chrX_-_13835012 1.005 GPM6B
glycoprotein M6B
chr13_-_99910548 0.927 NM_001098200
NM_005292
GPR18

G protein-coupled receptor 18

chr1_+_198608136 0.880 NM_002838
NM_080921
NM_080923
PTPRC


protein tyrosine phosphatase, receptor type, C


chr6_-_29527701 0.877 NM_006398
UBD
ubiquitin D
chr1_+_198608244 0.851 PTPRC
protein tyrosine phosphatase, receptor type, C
chr2_-_158300517 0.842 NM_004288
CYTIP
cytohesin 1 interacting protein
chr2_-_175462428 0.838 WIPF1
WAS/WASL interacting protein family, member 1
chr8_-_110693233 0.813 NM_001099745
NM_001099746
SYBU

syntabulin (syntaxin-interacting)

chr12_-_102872329 0.809 NM_001111284
IGF1
insulin-like growth factor 1 (somatomedin C)
chr12_+_54410893 0.797 HOXC5
HOXC6
homeobox C5
homeobox C6
chr12_-_102512277 0.792 NM_024057
NUP37
nucleoporin 37kDa
chr5_-_88119604 0.789 NM_001193348
NM_001193349
MEF2C

myocyte enhancer factor 2C

chr8_-_110661007 0.782 NM_001099747
NM_001099748
NM_001099749
NM_001099750
NM_017786
SYBU




syntabulin (syntaxin-interacting)




chr12_-_102874299 0.776 IGF1
insulin-like growth factor 1 (somatomedin C)
chr5_+_67588395 0.771 NM_001242466
PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr17_-_40833840 0.760 NM_016602
CCR10
chemokine (C-C motif) receptor 10
chr7_+_23286420 0.754 GPNMB
glycoprotein (transmembrane) nmb
chr1_-_150738232 0.749 CTSS
cathepsin S
chr3_-_151034514 0.738 NM_023915
GPR87
G protein-coupled receptor 87
chr12_+_28410132 0.735 NM_018318
CCDC91
coiled-coil domain containing 91
chr7_-_37024664 0.732 NM_001039459
ELMO1
engulfment and cell motility 1
chr8_+_54764367 0.728 NM_170587
RGS20
regulator of G-protein signaling 20
chr7_+_23286384 0.727 GPNMB
glycoprotein (transmembrane) nmb
chr10_+_48255223 0.715 NM_001040084
NM_001098845
ANXA8L2
ANXA8
ANXA8L1
annexin A8-like 2
annexin A8
annexin A8-like 1
chr13_-_36050758 0.707 NM_005584
MAB21L1
mab-21-like 1 (C. elegans)
chr3_+_63953419 0.679 NM_001128149
ATXN7
ataxin 7
chr10_-_47173917 0.674 NM_001040084
NM_001098845
ANXA8L2
ANXA8
ANXA8L1
annexin A8-like 2
annexin A8
annexin A8-like 1
chr7_+_129015483 0.674 NM_001130722
AHCYL2
adenosylhomocysteinase-like 2
chr7_+_23286390 0.668 GPNMB
glycoprotein (transmembrane) nmb
chr7_+_23286386 0.668 GPNMB
glycoprotein (transmembrane) nmb
chr5_+_115898218 0.652


chr10_+_47746919 0.649 NM_001630
ANXA8L2
ANXA8
annexin A8-like 2
annexin A8
chrX_+_37639246 0.630 NM_000397
CYBB
cytochrome b-245, beta polypeptide
chr8_+_98703361 0.605 MTDH
metadherin
chr8_-_102803196 0.601 NCALD
neurocalcin delta
chr7_-_7758237 0.594 NM_002947
RPA3
replication protein A3, 14kDa
chrX_-_72434623 0.591 NAP1L2
nucleosome assembly protein 1-like 2
chr9_+_118916069 0.573 NM_002581
PAPPA
pregnancy-associated plasma protein A, pappalysin 1
chr1_-_150738292 0.572 NM_001199739
NM_004079
CTSS

cathepsin S

chr20_-_18477811 0.571 NM_006606
RBBP9
retinoblastoma binding protein 9
chr6_-_33041266 0.570 NM_033554
HLA-DPA1
major histocompatibility complex, class II, DP alpha 1
chrX_-_13835313 0.565 NM_001001995
NM_001001996
NM_005278
GPM6B


glycoprotein M6B


chr4_-_176733901 0.556 GPM6A
glycoprotein M6A
chr2_-_216003068 0.549 NM_173076
ABCA12
ATP-binding cassette, sub-family A (ABC1), member 12
chr3_-_126327397 0.548 NM_001039783
TXNRD3NB
thioredoxin reductase 3 neighbor
chr12_-_53600999 0.548 NM_000889
ITGB7
integrin, beta 7
chr12_-_53601051 0.542 ITGB7
integrin, beta 7
chr18_+_29027731 0.539 NM_001944
DSG3
desmoglein 3
chr14_+_67831484 0.531 EIF2S1
eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
chr3_-_141747434 0.523 NM_001178141
NM_001178142
NM_006286
TFDP2


transcription factor Dp-2 (E2F dimerization partner 2)


chrX_-_107682600 0.522 NM_001847
COL4A6
collagen, type IV, alpha 6
chr22_+_40297183 0.521 GRAP2
GRB2-related adaptor protein 2
chr1_-_114414245 0.521 NM_001193431
NM_012411
NM_015967
PTPN22


protein tyrosine phosphatase, non-receptor type 22 (lymphoid)


chrX_-_72434656 0.517 NAP1L2
nucleosome assembly protein 1-like 2
chrX_-_72434667 0.515 NM_021963
NAP1L2
nucleosome assembly protein 1-like 2
chr7_+_26400503 0.507 NM_001199837
SNX10
sorting nexin 10
chr11_-_115088628 0.500 CADM1
cell adhesion molecule 1
chr1_+_111413820 0.499 NM_001040033
CD53
CD53 molecule
chr8_-_102803178 0.496 NCALD
neurocalcin delta
chr7_+_77469446 0.486 NM_001127357
NM_001127359
NM_020432
PHTF2


putative homeodomain transcription factor 2


chr22_+_40297085 0.480 NM_004810
GRAP2
GRB2-related adaptor protein 2
chr12_-_102874373 0.479 NM_000618
NM_001111283
NM_001111285
IGF1


insulin-like growth factor 1 (somatomedin C)


chr14_-_106733392 0.476 IGHG1
IGHG3
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant gamma 3 (G3m marker)
chr1_+_168250277 0.469 NM_005149
TBX19
T-box 19
chr1_-_150738255 0.469 CTSS
cathepsin S
chr1_+_174844655 0.468 NM_001035230
RABGAP1L
RAB GTPase activating protein 1-like
chr4_-_176733413 0.467 GPM6A
glycoprotein M6A
chrX_-_13835187 0.467 GPM6B
glycoprotein M6B
chr12_+_8332789 0.459 FAM66C
family with sequence similarity 66, member C
chr8_-_80993009 0.453 NM_001025252
TPD52
tumor protein D52
chr2_+_162272800 0.440 TBR1
T-box, brain, 1
chr14_-_106471439 0.439 IGHA1
IGHG1
IGHM
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant mu
chr12_-_102874321 0.438 IGF1
insulin-like growth factor 1 (somatomedin C)
chrX_-_110655384 0.436 NM_178151
NM_001195553
NM_178152
NM_178153
DCX



doublecortin



chr3_+_178276487 0.425 NM_005832
KCNMB2
potassium large conductance calcium-activated channel, subfamily M, beta member 2
chr4_-_103245468 0.425 NM_001135148
SLC39A8
solute carrier family 39 (zinc transporter), member 8
chr4_-_57547845 0.423 NM_001145460
NM_032495
NM_139212
HOPX


HOP homeobox


chr18_+_21269528 0.421 NM_001127717
NM_198129
LAMA3

laminin, alpha 3

chrX_+_99839789 0.415 NM_022144
TNMD
tenomodulin
chr6_-_169654047 0.415 NM_003247
THBS2
thrombospondin 2
chr2_+_162272892 0.414 TBR1
T-box, brain, 1
chr3_+_98250742 0.413 NM_005290
GPR15
G protein-coupled receptor 15
chr12_-_53994783 0.403 NM_001130059
ATF7
activating transcription factor 7
chr12_+_54422193 0.403 NM_004503
HOXC6
homeobox C6
chr14_-_107013474 0.399 IGHA1
IGHG1
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
chrX_+_37639306 0.399 CYBB
cytochrome b-245, beta polypeptide
chr12_-_54653317 0.398 NM_001127322
CBX5
chromobox homolog 5
chr15_+_94899163 0.394 NM_001159644
MCTP2
multiple C2 domains, transmembrane 2
chr3_-_9291251 0.392 NM_001033117
NM_014850
SRGAP3

SLIT-ROBO Rho GTPase activating protein 3

chr20_-_52199635 0.391 NM_006526
ZNF217
zinc finger protein 217
chr11_-_102576444 0.377 NM_022122
MMP27
matrix metallopeptidase 27
chr12_-_102874340 0.377 IGF1
insulin-like growth factor 1 (somatomedin C)
chr3_-_141719188 0.377 NM_001178140
TFDP2
transcription factor Dp-2 (E2F dimerization partner 2)
chr15_+_81489218 0.373 NM_001172128
IL16
interleukin 16
chr6_-_22297729 0.373 NM_000948
PRL
prolactin
chr6_-_136788012 0.372 NM_001198615
MAP7
microtubule-associated protein 7
chr5_-_22853435 0.371 CDH12
cadherin 12, type 2 (N-cadherin 2)
chr10_+_35426709 0.365 NM_183011
NM_183012
CREM

cAMP responsive element modulator

chr16_+_86612114 0.362 NM_005250
FOXL1
forkhead box L1
chr14_+_102276279 0.360 PPP2R5C
protein phosphatase 2, regulatory subunit B', gamma
chr15_+_34261088 0.359 NM_012125
CHRM5
cholinergic receptor, muscarinic 5
chrX_+_24073071 0.357 EIF2S3
eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
chr12_-_54653369 0.356 NM_001127321
CBX5
chromobox homolog 5
chrX_+_70765479 0.354 OGT
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
chr2_-_122159140 0.354 CLASP1
cytoplasmic linker associated protein 1
chr2_+_68961912 0.353 NM_001007231
NM_001166277
ARHGAP25

Rho GTPase activating protein 25

chr12_-_102874158 0.351 IGF1
insulin-like growth factor 1 (somatomedin C)
chr1_+_100316530 0.350 NM_000646
AGL
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
chr8_-_29207795 0.347 NM_001394
DUSP4
dual specificity phosphatase 4
chr1_-_92952429 0.345 NM_005263
GFI1
growth factor independent 1 transcription repressor
chr6_-_87804773 0.345 NM_000735
NM_001252383
CGA

glycoprotein hormones, alpha polypeptide

chr20_-_7921068 0.339 NM_017545
HAO1
hydroxyacid oxidase (glycolate oxidase) 1
chr2_-_216946463 0.337 NM_018441
PECR
peroxisomal trans-2-enoyl-CoA reductase
chr7_+_23286277 0.336 NM_001005340
NM_002510
GPNMB

glycoprotein (transmembrane) nmb

chr3_+_130569368 0.335 NM_001199180
NM_001199181
NM_001199182
ATP2C1


ATPase, Ca++ transporting, type 2C, member 1


chr13_+_24463006 0.330 NM_001014442
C1QTNF9B-AS1
C1QTNF9B antisense RNA 1 (non-protein coding)
chr8_+_132991171 0.326 EFR3A
EFR3 homolog A (S. cerevisiae)
chr4_-_116034932 0.323 NM_022569
NDST4
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
chr8_-_102803438 0.321 NM_032041
NCALD
neurocalcin delta
chr3_-_79817058 0.317 NM_002941
ROBO1
roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr2_+_234637772 0.316 NM_019093
UGT1A3
UDP glucuronosyltransferase 1 family, polypeptide A3
chr2_+_162272619 0.315 NM_006593
TBR1
T-box, brain, 1
chr3_+_141043054 0.313 NM_001080412
ZBTB38
zinc finger and BTB domain containing 38
chrX_+_107288199 0.311 NM_001170553
NM_182607
VSIG1

V-set and immunoglobulin domain containing 1

chr12_-_26277807 0.307 NM_030762
BHLHE41
basic helix-loop-helix family, member e41
chr1_+_158801105 0.306 NM_002432
MNDA
myeloid cell nuclear differentiation antigen
chr6_+_73076431 0.301 NM_001168411
RIMS1
regulating synaptic membrane exocytosis 1
chr11_+_99426872 0.300 NM_175566
CNTN5
contactin 5
chr6_-_24877453 0.300 NM_015864
FAM65B
family with sequence similarity 65, member B
chr14_-_106539099 0.300 IGHA1
IGHG1
IGHG3
immunoglobulin heavy constant alpha 1
immunoglobulin heavy constant gamma 1 (G1m marker)
immunoglobulin heavy constant gamma 3 (G3m marker)
chr6_-_32908583 0.299 NM_002118
HLA-DMB
major histocompatibility complex, class II, DM beta
chr3_+_69812961 0.294 NM_006722
MITF
microphthalmia-associated transcription factor
chr4_-_76944585 0.292 NM_001565
CXCL10
chemokine (C-X-C motif) ligand 10
chr1_+_79115476 0.288 NM_006417
IFI44
interferon-induced protein 44
chr4_-_120243257 0.286 NM_000134
FABP2
fatty acid binding protein 2, intestinal
chr2_-_200213802 0.285 SATB2
SATB homeobox 2
chr10_+_18549583 0.284 NM_000724
CACNB2
calcium channel, voltage-dependent, beta 2 subunit
chr13_-_41593405 0.282 ELF1
E74-like factor 1 (ets domain transcription factor)
chr3_+_142342265 0.281 NM_002670
PLS1
plastin 1
chr3_-_124930192 0.277 NM_001195483
SLC12A8
solute carrier family 12 (potassium/chloride transporters), member 8
chr3_-_167191808 0.277 NM_006217
SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
chr3_-_119582422 0.274 GSK3B
glycogen synthase kinase 3 beta
chr3_-_105421044 0.274 CBLB
Cas-Br-M (murine) ecotropic retroviral transforming sequence b
chr12_+_25205488 0.274 LRMP
lymphoid-restricted membrane protein
chrX_+_24073060 0.273 NM_001415
EIF2S3
eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
chr8_-_57026540 0.272 NM_005372
MOS
v-mos Moloney murine sarcoma viral oncogene homolog
chr18_+_29769986 0.271 NM_005925
MEP1B
meprin A, beta
chr7_+_28452143 0.271 NM_182898
CREB5
cAMP responsive element binding protein 5
chr2_+_102979096 0.270 NM_003855
IL18R1
interleukin 18 receptor 1
chr1_+_159259503 0.268 NM_002001
FCER1A
Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
chr17_-_39092714 0.268 KRT23
keratin 23 (histone deacetylase inducible)
chr12_+_14538232 0.268 ATF7IP
activating transcription factor 7 interacting protein
chr4_+_88571453 0.267 NM_001079911
NM_004407
DMP1

dentin matrix acidic phosphoprotein 1

chr7_-_27166638 0.263 NM_153631
HOXA3
homeobox A3
chr7_+_90339146 0.263 CDK14
cyclin-dependent kinase 14
chrX_-_24690740 0.262 NM_001163264
PCYT1B
phosphate cytidylyltransferase 1, choline, beta
chr5_+_156696351 0.255 NM_014376
CYFIP2
cytoplasmic FMR1 interacting protein 2
chr12_-_46633551 0.254 SLC38A1
solute carrier family 38, member 1
chr14_+_102276125 0.254 NM_002719
NM_178586
NM_178587
PPP2R5C


protein phosphatase 2, regulatory subunit B', gamma


chr6_+_31583766 0.254 NM_032955
AIF1
allograft inflammatory factor 1
chr18_-_3845295 0.251 NM_001003809
NM_001242765
NM_001242766
DLGAP1


discs, large (Drosophila) homolog-associated protein 1


chr4_-_46911223 0.250 NM_130902
COX7B2
cytochrome c oxidase subunit VIIb2
chr9_-_112191105 0.249 NM_001145371
NM_001145372
PTPN3

protein tyrosine phosphatase, non-receptor type 3

chr7_+_96745904 0.247 NM_020186
ACN9
ACN9 homolog (S. cerevisiae)
chr12_-_10282680 0.242 NM_022570
NM_197947
NM_197948
NM_197949
NM_197950
NM_197954
CLEC7A





C-type lectin domain family 7, member A





chr8_+_22844918 0.236 NM_001160036
RHOBTB2
Rho-related BTB domain containing 2
chr3_-_12941547 0.235 IQSEC1
IQ motif and Sec7 domain 1
chr14_-_64194692 0.235 NM_030791
SGPP1
sphingosine-1-phosphate phosphatase 1
chr8_-_101315457 0.234 NM_015435
RNF19A
ring finger protein 19A
chr1_+_153003677 0.234 NM_003125
SPRR1B
small proline-rich protein 1B
chrX_+_49091926 0.234 NM_014008
CCDC22
coiled-coil domain containing 22
chr21_-_31538970 0.233 NM_012131
CLDN17
claudin 17
chr9_+_12693385 0.230 NM_000550
TYRP1
tyrosinase-related protein 1
chr2_-_191872322 0.229 STAT1
signal transducer and activator of transcription 1, 91kDa
chr5_+_59784004 0.228 PART1
prostate androgen-regulated transcript 1 (non-protein coding)
chr15_+_52201590 0.228 TMOD3
tropomodulin 3 (ubiquitous)
chr7_-_122839999 0.227 NM_022444
SLC13A1
solute carrier family 13 (sodium/sulfate symporters), member 1
chr3_+_119316694 0.226 NM_001206960
NM_001206961
NM_015900
PLA1A


phospholipase A1 member A


chrX_-_114252132 0.225 NM_000640
IL13RA2
interleukin 13 receptor, alpha 2
chrX_-_118726852 0.225 NM_001173488
NKRF
NFKB repressing factor
chr1_-_154578775 0.224 NM_001193495
ADAR
adenosine deaminase, RNA-specific
chr17_-_39093671 0.222 NM_015515
KRT23
keratin 23 (histone deacetylase inducible)
chr3_+_39424766 0.218 NM_017875
SLC25A38
solute carrier family 25, member 38
chr20_-_34025955 0.217 NM_000557
GDF5
growth differentiation factor 5
chr3_-_111314181 0.217 NM_024508
ZBED2
zinc finger, BED-type containing 2

Gene Ontology Analysis

Nothing significant found in process category.

Nothing significant found in compartment category.

Nothing significant found in function category.