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GSE130291:vernalization in Arabidopsis thaliana

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Results for AT2G02820

Z-value: 2.09

Transcription factors associated with AT2G02820

Gene Symbol Gene ID Gene Info
AT2G02820 myb domain protein 88

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB88arTal_v1_Chr2_-_807756_8078950.544.7e-02Click!

Activity profile of AT2G02820 motif

Sorted Z-values of AT2G02820 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_17712290 2.27 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
cold-regulated 15a
Chr3_+_4104463 2.16 AT3G12900.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_21240717 2.16 AT5G52310.1
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Chr1_-_5765798 1.95 AT1G16850.1
transmembrane protein
Chr1_-_10164452 1.80 AT1G29090.1
Cysteine proteinases superfamily protein
Chr3_-_20576249 1.63 AT3G55500.1
expansin A16
Chr3_+_22935510 1.60 AT3G61930.1
hypothetical protein
Chr1_-_7089606 1.56 AT1G20450.1
AT1G20450.2
Dehydrin family protein
Chr3_-_20142763 1.53 AT3G54400.1
Eukaryotic aspartyl protease family protein
Chr4_-_18472048 1.52 AT4G39800.1
myo-inositol-1-phosphate synthase 1
Chr1_-_7086873 1.51 AT1G20440.1
cold-regulated 47
Chr5_+_22388782 1.48 AT5G55180.2
O-Glycosyl hydrolases family 17 protein
Chr5_+_22388521 1.46 AT5G55180.1
O-Glycosyl hydrolases family 17 protein
Chr5_-_4620551 1.40 AT5G14330.1
transmembrane protein
Chr2_+_15106940 1.38 AT2G35960.1
NDR1/HIN1-like 12
Chr3_+_20612693 1.34 AT3G55580.1
Regulator of chromosome condensation (RCC1) family protein
Chr1_-_3167924 1.33 AT1G09780.1
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
Chr4_+_12827856 1.32 AT4G24960.1
AT4G24960.3
AT4G24960.2
HVA22 homologue D
Chr1_-_1248826 1.31 AT1G04570.2
AT1G04570.1
Major facilitator superfamily protein
Chr1_-_598657 1.31 AT1G02730.1
cellulose synthase-like D5
Chr5_-_7054281 1.27 AT5G20830.3
sucrose synthase 1
Chr2_+_11723398 1.26 AT2G27402.2
plastid transcriptionally active protein
Chr5_-_7054713 1.25 AT5G20830.1
sucrose synthase 1
Chr5_+_3347381 1.23 AT5G10580.3
AT5G10580.4
AT5G10580.1
AT5G10580.2
plant/protein (Protein of unknown function, DUF599)
Chr5_-_7055398 1.23 AT5G20830.2
sucrose synthase 1
Chr4_-_13001948 1.20 AT4G25433.1
peptidoglycan-binding LysM domain-containing protein
Chr2_-_12343443 1.19 AT2G28780.1
P-hydroxybenzoic acid efflux pump subunit
Chr4_-_13761603 1.19 AT4G27560.1
UDP-Glycosyltransferase superfamily protein
Chr5_-_1459039 1.19 AT5G04950.1
nicotianamine synthase 1
Chr5_+_3536189 1.19 AT5G11110.1
sucrose phosphate synthase 2F
Chr4_-_9607402 1.17 AT4G17090.1
chloroplast beta-amylase
Chr3_+_8172479 1.17 AT3G23000.1
CBL-interacting protein kinase 7
Chr2_+_9592956 1.17 AT2G22590.1
UDP-Glycosyltransferase superfamily protein
Chr3_-_5845220 1.16 AT3G17130.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr2_+_11401118 1.15 AT2G26760.1
Cyclin B1;4
Chr4_-_9844290 1.15 AT4G17680.3
AT4G17680.2
AT4G17680.1
SBP (S-ribonuclease binding protein) family protein
Chr1_-_10664570 1.14 AT1G30280.2
AT1G30280.3
AT1G30280.1
Chaperone DnaJ-domain superfamily protein
Chr2_+_11722770 1.13 AT2G27402.1
plastid transcriptionally active protein
Chr5_+_21069495 1.12 AT5G51830.2
pfkB-like carbohydrate kinase family protein
Chr2_-_7153430 1.11 AT2G16500.1
arginine decarboxylase 1
Chr1_-_29239484 1.11 AT1G77760.1
nitrate reductase 1
Chr5_-_19563832 1.10 AT5G48250.1
B-box type zinc finger protein with CCT domain-containing protein
Chr5_-_23301689 1.10 AT5G57530.1
xyloglucan endotransglucosylase/hydrolase 12
Chr5_+_21069110 1.10 AT5G51830.1
pfkB-like carbohydrate kinase family protein
Chr3_-_8589754 1.09 AT3G23810.1
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr2_+_10662190 1.09 AT2G25060.1
early nodulin-like protein 14
Chr4_-_13752103 1.08 AT4G27520.1
early nodulin-like protein 2
Chr1_+_2524023 1.07 AT1G08090.1
nitrate transporter 2:1
Chr4_-_13317640 1.06 AT4G26320.1
arabinogalactan protein 13
Chr2_+_9841842 1.05 AT2G23120.1
Late embryogenesis abundant protein, group 6
Chr5_-_5310951 1.04 AT5G16250.1
transmembrane protein
Chr4_-_16046937 1.04 AT4G33270.1
Transducin family protein / WD-40 repeat family protein
Chr2_-_12415661 1.04 AT2G28900.1
outer plastid envelope protein 16-1
Chr5_-_7820760 1.02 AT5G23220.1
nicotinamidase 3
Chr3_+_9396272 1.02 AT3G25730.1
ethylene response DNA binding factor 3
Chr5_-_2365605 1.02 AT5G07475.1
Cupredoxin superfamily protein
Chr3_-_2905931 1.02 AT3G09440.4
AT3G09440.2
AT3G09440.1
Heat shock protein 70 (Hsp 70) family protein
Chr5_+_4370692 1.01 AT5G13580.1
ABC-2 type transporter family protein
Chr2_-_9538963 1.01 AT2G22470.1
arabinogalactan protein 2
Chr3_-_2905729 1.00 AT3G09440.3
Heat shock protein 70 (Hsp 70) family protein
Chr5_-_16667171 1.00 AT5G41670.2
AT5G41670.3
6-phosphogluconate dehydrogenase family protein
Chr4_-_993039 1.00 AT4G02270.1
root hair specific 13
Chr4_+_596397 0.99 AT4G01440.3
AT4G01440.2
AT4G01440.1
AT4G01440.4
nodulin MtN21 /EamA-like transporter family protein
Chr3_-_19747114 0.99 AT3G53260.1
phenylalanine ammonia-lyase 2
Chr2_+_9248525 0.99 AT2G21620.1
AT2G21620.2
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr5_-_16667390 0.98 AT5G41670.1
AT5G41670.4
6-phosphogluconate dehydrogenase family protein
Chr3_+_5585872 0.98 AT3G16440.2
AT3G16440.1
myrosinase-binding protein-like protein-300B
Chr5_+_18537239 0.98 AT5G45700.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr2_+_9293261 0.98 AT2G21790.1
ribonucleotide reductase 1
Chr5_-_1861656 0.97 AT5G06150.2
AT5G06150.1
Cyclin family protein
Chr3_-_21097481 0.97 AT3G57010.1
Calcium-dependent phosphotriesterase superfamily protein
Chr1_+_25701770 0.96 AT1G68500.1
hypothetical protein
Chr1_+_3093644 0.96 AT1G09560.1
germin-like protein 5
Chr3_-_4095112 0.95 AT3G12870.1
transmembrane protein
Chr3_+_17268700 0.95 AT3G46900.1
copper transporter 2
Chr3_-_8807460 0.95 AT3G24300.1
ammonium transporter 1;3
Chr5_-_7654835 0.94 AT5G22890.1
C2H2 and C2HC zinc fingers superfamily protein
Chr1_+_4342209 0.93 AT1G12740.1
AT1G12740.2
AT1G12740.3
AT1G12740.4
cytochrome P450, family 87, subfamily A, polypeptide 2
Chr1_+_7404328 0.93 AT1G21140.1
Vacuolar iron transporter (VIT) family protein
Chr2_+_13107909 0.92 AT2G30766.2
hypothetical protein
Chr4_+_8646150 0.92 AT4G15160.2
AT4G15160.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_7316789 0.92 AT2G16890.3
AT2G16890.2
AT2G16890.1
AT2G16890.4
UDP-Glycosyltransferase superfamily protein
Chr4_-_1046993 0.91 AT4G02380.2
AT4G02380.1
AT4G02380.3
senescence-associated gene 21
Chr5_-_26120581 0.91 AT5G65360.1
Histone superfamily protein
Chr3_-_22501239 0.90 AT3G60900.1
FASCICLIN-like arabinogalactan-protein 10
Chr3_-_2569700 0.90 AT3G08040.2
AT3G08040.1
MATE efflux family protein
Chr1_+_28829243 0.90 AT1G76800.1
Vacuolar iron transporter (VIT) family protein
Chr1_+_30180907 0.90 AT1G80270.2
AT1G80270.3
AT1G80270.4
AT1G80270.1
AT1G80270.5
PENTATRICOPEPTIDE REPEAT 596
Chr3_+_19037140 0.90 AT3G51280.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_8189220 0.90 AT1G23090.4
AT1G23090.1
AT1G23090.3
AT1G23090.2
sulfate transporter 91
Chr2_-_9049404 0.90 AT2G21100.1
AT2G21100.2
Disease resistance-responsive (dirigent-like protein) family protein
Chr2_+_13107583 0.90 AT2G30766.1
hypothetical protein
Chr1_+_18305445 0.90 AT1G49450.1
Transducin/WD40 repeat-like superfamily protein
Chr1_+_218834 0.89 AT1G01600.1
cytochrome P450, family 86, subfamily A, polypeptide 4
Chr1_+_24257216 0.89 AT1G65310.1
xyloglucan endotransglucosylase/hydrolase 17
Chr1_+_27538190 0.89 AT1G73220.1
organic cation/carnitine transporter1
Chr5_+_21771811 0.88 AT5G53590.1
SAUR-like auxin-responsive protein family
Chr2_-_19638678 0.88 AT2G47990.1
transducin family protein / WD-40 repeat family protein
Chr2_-_17562947 0.87 AT2G42110.1
hypothetical protein
Chr1_+_24257054 0.87 AT1G65310.2
xyloglucan endotransglucosylase/hydrolase 17
Chr5_+_23693259 0.86 AT5G58620.1
zinc finger (CCCH-type) family protein
Chr3_+_18487411 0.86 AT3G49845.2
cysteine-rich TM module stress tolerance protein
Chr4_-_8307934 0.86 AT4G14440.1
3-hydroxyacyl-CoA dehydratase 1
Chr5_+_332330 0.86 AT5G01850.2
AT5G01850.1
Protein kinase superfamily protein
Chr5_-_23281271 0.85 AT5G57480.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_16285229 0.85 AT4G33980.1
hypothetical protein
Chr2_+_11012499 0.85 AT2G25810.1
tonoplast intrinsic protein 4;1
Chr3_-_19213709 0.85 AT3G51800.2
AT3G51800.1
AT3G51800.3
metallopeptidase M24 family protein
Chr2_+_17367492 0.85 AT2G41660.1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr1_-_10127098 0.85 AT1G29025.1
Calcium-binding EF-hand family protein
Chr3_-_1652149 0.84 AT3G05660.1
receptor like protein 33
Chr5_-_3172701 0.84 AT5G10130.1
Pollen Ole e 1 allergen and extensin family protein
Chr4_-_16732923 0.84 AT4G35160.1
O-methyltransferase family protein
Chr3_-_21798303 0.84 AT3G58990.1
isopropylmalate isomerase 1
Chr2_+_8940833 0.84 AT2G20750.2
AT2G20750.1
expansin B1
Chr4_-_16285059 0.83 AT4G33980.2
hypothetical protein
Chr5_+_2866222 0.83 AT5G09220.1
amino acid permease 2
Chr3_+_1593668 0.83 AT3G05500.2
Rubber elongation factor protein (REF)
Chr5_-_25646845 0.82 AT5G64080.2
AT5G64080.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_23195917 0.82 AT3G62700.1
multidrug resistance-associated protein 10
Chr3_-_19139423 0.82 AT3G51600.1
lipid transfer protein 5
Chr2_+_7703805 0.82 AT2G17730.1
AT2G17730.2
NEP-interacting protein 2
Chr5_+_26476166 0.82 AT5G66280.1
GDP-D-mannose 4,6-dehydratase 1
Chr3_+_1024144 0.81 AT3G03960.1
TCP-1/cpn60 chaperonin family protein
Chr3_+_1727151 0.81 AT3G05800.1
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1
Chr5_-_10092686 0.81 AT5G28080.7
AT5G28080.1
AT5G28080.6
AT5G28080.2
AT5G28080.5
AT5G28080.3
AT5G28080.4
AT5G28080.8
Protein kinase superfamily protein
Chr1_+_25508639 0.81 AT1G68050.1
flavin-binding, kelch repeat, f box 1
Chr3_-_9981620 0.81 AT3G27060.1
Ferritin/ribonucleotide reductase-like family protein
Chr3_+_1593182 0.81 AT3G05500.1
Rubber elongation factor protein (REF)
Chr3_-_22881775 0.81 AT3G61820.1
Eukaryotic aspartyl protease family protein
Chr1_+_116784 0.80 AT1G01300.1
Eukaryotic aspartyl protease family protein
Chr3_+_7275645 0.80 AT3G20810.1
AT3G20810.4
AT3G20810.2
AT3G20810.5
AT3G20810.3
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_22514415 0.80 AT3G60930.1

Chr4_-_16080721 0.80 AT4G33400.1
Vacuolar import/degradation, Vid27-related protein
Chr3_-_19821505 0.80 AT3G53460.1
AT3G53460.2
AT3G53460.3
AT3G53460.4
chloroplast RNA-binding protein 29
Chr5_-_5609589 0.80 AT5G17050.1
UDP-glucosyl transferase 78D2
Chr2_-_4007044 0.80 AT2G10410.1

Chr2_+_7513128 0.79 AT2G17280.2
AT2G17280.1
Phosphoglycerate mutase family protein
Chr1_-_6241510 0.79 AT1G18140.1
laccase 1
Chr5_+_26743279 0.79 AT5G66985.1
hypothetical protein
Chr1_-_6735024 0.78 AT1G19450.1
Major facilitator superfamily protein
Chr2_-_18744322 0.78 AT2G45470.1
FASCICLIN-like arabinogalactan protein 8
Chr4_-_9250343 0.77 AT4G16370.1
oligopeptide transporter
Chr5_-_6547127 0.77 AT5G19410.1
AT5G19410.2
ABC-2 type transporter family protein
Chr1_-_4845847 0.77 AT1G14170.2
AT1G14170.1
AT1G14170.3
RNA-binding KH domain-containing protein
Chr3_+_18487130 0.77 AT3G49845.1
cysteine-rich TM module stress tolerance protein
Chr5_+_25721733 0.77 AT5G64310.1
arabinogalactan protein 1
Chr1_+_23448812 0.77 AT1G63220.1
AT1G63220.2
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_19888328 0.76 AT1G53310.3
AT1G53310.1
AT1G53310.2
phosphoenolpyruvate carboxylase 1
Chr1_-_12617032 0.76 AT1G34510.1
Peroxidase superfamily protein
Chr2_-_12355480 0.76 AT2G28790.1
AT2G28790.2
Pathogenesis-related thaumatin superfamily protein
Chr4_+_17639 0.75 AT4G00050.1
AT4G00050.3
AT4G00050.2
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_+_22337791 0.75 AT3G60440.1
AT3G60440.2
Phosphoglycerate mutase family protein
Chr5_-_7385833 0.75 AT5G22310.1
trichohyalin-like protein
Chr2_-_15481377 0.75 AT2G36880.2
AT2G36880.1
methionine adenosyltransferase 3
Chr1_-_20368511 0.75 AT1G54540.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_+_11926446 0.75 AT2G28000.1
chaperonin-60alpha
Chr2_-_7757875 0.75 AT2G17840.2
AT2G17840.1
Senescence/dehydration-associated protein-like protein
Chr5_+_1461786 0.74 AT5G04960.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_4710483 0.74 AT3G14190.2
AT3G14190.1
hypothetical protein
Chr5_+_2560328 0.74 AT5G07990.1
Cytochrome P450 superfamily protein
Chr5_-_9000345 0.74 AT5G25820.1
Exostosin family protein
Chr1_+_3919237 0.74 AT1G11655.1
hypothetical protein
Chr1_-_17266724 0.74 AT1G46768.3
AT1G46768.2
AT1G46768.1
related to AP2 1
Chr5_+_20436180 0.74 AT5G50200.3
AT5G50200.2
nitrate transmembrane transporter
Chr4_-_17293925 0.73 AT4G36680.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_3728726 0.73 AT5G11590.1
Integrase-type DNA-binding superfamily protein
Chr1_-_27998821 0.73 AT1G74500.1
activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1
Chr5_-_8358546 0.73 AT5G24470.1
two-component response regulator-like protein
Chr3_+_5535124 0.73 AT3G16330.1
Avr9/Cf-9 rapidly elicited protein
Chr3_-_3627273 0.73 AT3G11520.2
AT3G11520.1
CYCLIN B1;3
Chr3_+_22514027 0.73 AT3G60930.2

Chr1_-_156011 0.72 AT1G01420.1
UDP-glucosyl transferase 72B3
Chr5_-_4915976 0.72 AT5G15150.1
homeobox 3
Chr3_-_4834015 0.72 AT3G14440.1
nine-cis-epoxycarotenoid dioxygenase 3
Chr3_+_2022433 0.72 AT3G06530.2
AT3G06530.3
AT3G06530.4
AT3G06530.1
AT3G06530.5
ARM repeat superfamily protein
Chr1_+_26315787 0.72 AT1G69870.1
nitrate transporter 1.7
Chr4_+_597187 0.72 AT4G01440.5
nodulin MtN21 /EamA-like transporter family protein
Chr5_+_20949291 0.72 AT5G51570.1
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr3_+_8603212 0.72 AT3G23820.1
UDP-D-glucuronate 4-epimerase 6
Chr1_-_8501542 0.71 AT1G24020.1
MLP-like protein 423
Chr4_+_18525246 0.71 AT4G39950.1
cytochrome P450, family 79, subfamily B, polypeptide 2
Chr2_+_15339122 0.71 AT2G36580.1
Pyruvate kinase family protein
Chr5_+_21020014 0.71 AT5G51750.1
subtilase 1.3
Chr5_-_16592381 0.71 AT5G41460.1
transferring glycosyl group transferase (DUF604)
Chr2_-_19667192 0.71 AT2G48080.1
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Chr1_+_10991478 0.71 AT1G30870.1
Peroxidase superfamily protein
Chr2_-_12646057 0.71 AT2G29550.1
tubulin beta-7 chain
Chr2_+_10244745 0.71 AT2G24100.1
ATP-dependent DNA helicase
Chr4_-_13123354 0.71 AT4G25790.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr5_+_22312976 0.71 AT5G54970.1
hypothetical protein
Chr2_-_1167115 0.71 AT2G03820.1
nonsense-mediated mRNA decay NMD3 family protein
Chr5_+_20436426 0.71 AT5G50200.1
nitrate transmembrane transporter
Chr1_-_29203418 0.70 AT1G77690.1
like AUX1 3
Chr5_-_556623 0.70 AT5G02500.1
heat shock cognate protein 70-1
Chr5_-_556442 0.70 AT5G02500.2
heat shock cognate protein 70-1
Chr1_-_156178 0.70 AT1G01420.2
UDP-glucosyl transferase 72B3
Chr4_+_18525042 0.70 AT4G39950.2
cytochrome P450, family 79, subfamily B, polypeptide 2
Chr1_+_19711179 0.70 AT1G52930.1
Ribosomal RNA processing Brix domain protein
Chr3_-_5727664 0.70 AT3G16810.1
pumilio 24

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G02820

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.8 GO:0072708 response to sorbitol(GO:0072708)
0.5 1.5 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.5 0.5 GO:0042353 fucose biosynthetic process(GO:0042353)
0.4 1.3 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.4 0.4 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.4 1.5 GO:0006527 arginine catabolic process(GO:0006527)
0.4 1.4 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.4 3.5 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.3 3.1 GO:0009819 drought recovery(GO:0009819)
0.3 1.0 GO:0090547 response to low humidity(GO:0090547)
0.3 1.3 GO:0010507 negative regulation of autophagy(GO:0010507)
0.3 1.6 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.3 1.5 GO:0010376 stomatal complex formation(GO:0010376)
0.3 0.9 GO:0015696 ammonium transport(GO:0015696)
0.3 1.4 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.3 0.9 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.3 1.1 GO:0071836 nectar secretion(GO:0071836)
0.3 0.8 GO:1902534 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.3 1.7 GO:0097576 vacuole fusion(GO:0097576)
0.3 0.8 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.3 0.8 GO:0043132 NAD transport(GO:0043132)
0.3 1.0 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.3 1.0 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.2 1.2 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 0.9 GO:0000023 maltose metabolic process(GO:0000023)
0.2 1.1 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.2 0.9 GO:0007032 endosome organization(GO:0007032)
0.2 2.0 GO:0071249 cellular response to nitrate(GO:0071249)
0.2 6.9 GO:0042026 protein refolding(GO:0042026)
0.2 1.5 GO:0019320 hexose catabolic process(GO:0019320)
0.2 0.9 GO:0019477 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.2 0.7 GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.2 0.6 GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.2 1.0 GO:1902407 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.2 0.8 GO:0009264 deoxyribonucleotide catabolic process(GO:0009264)
0.2 1.2 GO:0010338 leaf formation(GO:0010338)
0.2 1.2 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.2 0.6 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.2 1.0 GO:0060919 auxin influx(GO:0060919)
0.2 0.6 GO:0071763 nuclear membrane organization(GO:0071763)
0.2 0.8 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 0.2 GO:0009745 sucrose mediated signaling(GO:0009745)
0.2 0.6 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
0.2 0.6 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.2 0.6 GO:0019632 shikimate metabolic process(GO:0019632)
0.2 0.6 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.2 0.6 GO:2000653 regulation of genetic imprinting(GO:2000653)
0.2 0.4 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.2 0.5 GO:0071258 cellular response to gravity(GO:0071258)
0.2 0.5 GO:0009660 amyloplast organization(GO:0009660)
0.2 0.4 GO:0030641 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.2 3.0 GO:1902074 response to salt(GO:1902074)
0.2 0.7 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 1.7 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.2 1.2 GO:0015800 acidic amino acid transport(GO:0015800)
0.2 0.7 GO:0051211 anisotropic cell growth(GO:0051211)
0.2 1.4 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.2 0.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 0.5 GO:0019184 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.2 0.5 GO:0045835 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.2 0.5 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.2 1.6 GO:0009088 threonine biosynthetic process(GO:0009088)
0.2 0.8 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 0.5 GO:0019695 choline metabolic process(GO:0019695)
0.2 1.4 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.2 0.3 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.2 0.6 GO:0042256 mature ribosome assembly(GO:0042256)
0.2 0.5 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.1 0.3 GO:0035865 cellular response to potassium ion(GO:0035865)
0.1 0.7 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.1 0.6 GO:0016139 glycoside catabolic process(GO:0016139)
0.1 0.7 GO:0006106 fumarate metabolic process(GO:0006106)
0.1 0.9 GO:0009303 rRNA transcription(GO:0009303)
0.1 0.4 GO:0042908 xenobiotic transport(GO:0042908)
0.1 1.1 GO:0006611 protein export from nucleus(GO:0006611)
0.1 0.8 GO:0048439 flower morphogenesis(GO:0048439)
0.1 0.4 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.1 0.5 GO:0052746 inositol phosphorylation(GO:0052746)
0.1 0.4 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.1 0.4 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.1 0.4 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.1 0.5 GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.1 0.3 GO:0045332 phospholipid translocation(GO:0045332)
0.1 0.5 GO:0015692 lead ion transport(GO:0015692)
0.1 0.5 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.1 0.4 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 1.9 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.6 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.1 1.5 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.1 0.4 GO:0032414 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.1 0.6 GO:0009262 deoxyribonucleotide metabolic process(GO:0009262) deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 0.6 GO:0045793 positive regulation of cell size(GO:0045793)
0.1 1.2 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 1.6 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.5 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.1 0.4 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424)
0.1 0.2 GO:0033530 raffinose metabolic process(GO:0033530)
0.1 0.4 GO:0031848 protection from non-homologous end joining at telomere(GO:0031848)
0.1 0.4 GO:0016540 protein autoprocessing(GO:0016540)
0.1 0.6 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.7 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 0.8 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.1 1.0 GO:0046473 phosphatidic acid metabolic process(GO:0046473)
0.1 1.9 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.1 1.2 GO:0010088 phloem development(GO:0010088)
0.1 0.8 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.9 GO:0006183 GTP biosynthetic process(GO:0006183)
0.1 0.4 GO:0060236 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.1 1.5 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.3 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.1 1.3 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.1 0.5 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.1 0.3 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.1 1.1 GO:0099587 inorganic cation import into cell(GO:0098659) inorganic ion import into cell(GO:0099587)
0.1 0.6 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 0.7 GO:0051775 response to redox state(GO:0051775)
0.1 0.4 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.4 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.1 0.9 GO:0016045 detection of bacterium(GO:0016045)
0.1 1.2 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.3 GO:0051512 positive regulation of unidimensional cell growth(GO:0051512)
0.1 0.3 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.1 0.3 GO:2000011 regulation of adaxial/abaxial pattern formation(GO:2000011)
0.1 0.3 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.4 GO:0015700 arsenite transport(GO:0015700)
0.1 0.3 GO:0010617 circadian regulation of calcium ion oscillation(GO:0010617)
0.1 0.3 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.4 GO:1904356 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.1 0.3 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 0.5 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.8 GO:0040001 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 0.5 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 0.4 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.6 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.9 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 1.3 GO:0006102 isocitrate metabolic process(GO:0006102)
0.1 0.5 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.4 GO:0019377 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 0.8 GO:0019856 pyrimidine nucleobase biosynthetic process(GO:0019856)
0.1 1.3 GO:0010167 response to nitrate(GO:0010167)
0.1 1.4 GO:0000919 cell plate assembly(GO:0000919)
0.1 0.4 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.2 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.1 0.2 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.1 0.4 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.8 GO:0046084 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.1 0.4 GO:0033306 phytol metabolic process(GO:0033306)
0.1 1.1 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.1 0.4 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.3 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 0.3 GO:0009663 plasmodesma organization(GO:0009663)
0.1 0.7 GO:0043489 RNA stabilization(GO:0043489)
0.1 3.6 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.4 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 0.3 GO:0048480 stigma development(GO:0048480)
0.1 0.3 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.1 0.3 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.1 0.5 GO:0010071 root meristem specification(GO:0010071)
0.1 0.3 GO:0055047 generative cell mitosis(GO:0055047)
0.1 0.6 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.1 0.5 GO:0015691 cadmium ion transport(GO:0015691)
0.1 0.2 GO:0070207 protein homotrimerization(GO:0070207)
0.1 0.6 GO:0051418 interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)
0.1 0.8 GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000466)
0.1 1.1 GO:0052543 callose deposition in cell wall(GO:0052543)
0.1 0.6 GO:1900911 regulation of ethylene biosynthetic process(GO:0010364) regulation of sulfur amino acid metabolic process(GO:0031335) regulation of olefin metabolic process(GO:1900908) regulation of olefin biosynthetic process(GO:1900911)
0.1 0.2 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 1.0 GO:0006265 DNA topological change(GO:0006265)
0.1 0.8 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.2 GO:0010359 regulation of anion channel activity(GO:0010359)
0.1 0.2 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336)
0.1 0.3 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.1 0.2 GO:0006212 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859) uracil metabolic process(GO:0019860)
0.1 1.4 GO:1901071 glucosamine-containing compound metabolic process(GO:1901071)
0.1 2.0 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.4 GO:0000965 mitochondrial RNA 3'-end processing(GO:0000965)
0.1 0.3 GO:0007349 cellularization(GO:0007349)
0.1 0.2 GO:0090058 metaxylem development(GO:0090058)
0.1 0.7 GO:0006278 RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.1 0.7 GO:0005513 detection of calcium ion(GO:0005513)
0.1 1.0 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.4 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.1 0.9 GO:0060321 acceptance of pollen(GO:0060321)
0.1 0.4 GO:0042981 apoptotic process(GO:0006915) regulation of apoptotic process(GO:0042981) negative regulation of apoptotic process(GO:0043066)
0.1 0.2 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.1 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.1 0.4 GO:0016572 histone phosphorylation(GO:0016572)
0.1 3.8 GO:0009631 cold acclimation(GO:0009631)
0.1 1.2 GO:0019430 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.1 0.3 GO:0018206 peptidyl-methionine modification(GO:0018206)
0.1 0.7 GO:0006450 regulation of translational fidelity(GO:0006450)
0.1 0.1 GO:0071732 cellular response to nitric oxide(GO:0071732)
0.1 0.6 GO:0046785 microtubule polymerization(GO:0046785)
0.1 0.5 GO:0000338 protein deneddylation(GO:0000338)
0.1 0.7 GO:0071173 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.1 0.9 GO:0008214 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.1 0.3 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.3 GO:0007142 male meiosis II(GO:0007142)
0.1 0.8 GO:0051050 positive regulation of transport(GO:0051050)
0.1 0.3 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.3 GO:0000012 single strand break repair(GO:0000012)
0.1 0.1 GO:0010266 response to vitamin B1(GO:0010266)
0.1 0.3 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 1.2 GO:1904029 regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) regulation of cyclin-dependent protein kinase activity(GO:1904029)
0.1 0.3 GO:0071313 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.1 0.4 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.3 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.1 0.3 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.1 0.4 GO:0043101 purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.1 0.2 GO:0080058 protein deglutathionylation(GO:0080058)
0.1 0.6 GO:0010315 auxin efflux(GO:0010315)
0.1 0.9 GO:0010274 hydrotropism(GO:0010274)
0.1 0.6 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.1 3.4 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 1.1 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 1.4 GO:0048768 root hair cell tip growth(GO:0048768)
0.1 0.6 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.1 0.6 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.1 GO:0080171 lytic vacuole organization(GO:0080171)
0.1 0.1 GO:1902806 regulation of cell cycle G1/S phase transition(GO:1902806)
0.1 0.1 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 0.2 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.6 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 2.8 GO:0010075 regulation of meristem growth(GO:0010075)
0.1 0.2 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.2 GO:0048863 stem cell differentiation(GO:0048863)
0.1 0.8 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 0.9 GO:0006826 iron ion transport(GO:0006826)
0.1 0.6 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.1 0.5 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.7 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.1 0.6 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.1 1.7 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 0.3 GO:0009650 UV protection(GO:0009650)
0.1 0.1 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.1 0.9 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.1 0.6 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.1 0.4 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.9 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 6.5 GO:0006457 protein folding(GO:0006457)
0.0 1.5 GO:0010345 suberin biosynthetic process(GO:0010345)
0.0 0.4 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.0 0.1 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.0 1.7 GO:0022904 respiratory electron transport chain(GO:0022904)
0.0 0.2 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.8 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.7 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.1 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.9 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.3 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 2.7 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.4 GO:0048766 root hair initiation(GO:0048766)
0.0 0.2 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.1 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.0 0.5 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.0 0.2 GO:0080003 thalianol metabolic process(GO:0080003)
0.0 0.2 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.0 1.3 GO:0051170 nuclear import(GO:0051170)
0.0 0.9 GO:0009638 phototropism(GO:0009638)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.2 GO:0045828 positive regulation of isoprenoid metabolic process(GO:0045828)
0.0 0.3 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.0 0.3 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.0 0.1 GO:0071494 cellular response to UV-C(GO:0071494)
0.0 0.3 GO:0010098 suspensor development(GO:0010098)
0.0 0.4 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.4 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 1.1 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.4 GO:0070131 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.7 GO:0080022 primary root development(GO:0080022)
0.0 0.2 GO:0090059 protoxylem development(GO:0090059)
0.0 0.2 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.0 0.9 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 0.6 GO:0009704 de-etiolation(GO:0009704)
0.0 1.4 GO:0035195 gene silencing by miRNA(GO:0035195)
0.0 0.3 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.0 1.5 GO:0006413 translational initiation(GO:0006413)
0.0 0.5 GO:0032544 plastid translation(GO:0032544)
0.0 0.5 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.2 GO:0006788 heme oxidation(GO:0006788)
0.0 0.3 GO:0010117 photoprotection(GO:0010117)
0.0 1.0 GO:0000911 cytokinesis by cell plate formation(GO:0000911)
0.0 0.4 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.3 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.0 2.4 GO:0010054 trichoblast differentiation(GO:0010054)
0.0 0.3 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 0.1 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.0 0.2 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.0 1.1 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.1 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.0 0.2 GO:0045116 protein neddylation(GO:0045116)
0.0 0.5 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 2.5 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.2 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.3 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.3 GO:1901992 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of chromosome segregation(GO:0051984) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of cell cycle phase transition(GO:1901989) positive regulation of mitotic cell cycle phase transition(GO:1901992) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 2.9 GO:0006869 lipid transport(GO:0006869)
0.0 0.1 GO:0010148 transpiration(GO:0010148)
0.0 0.2 GO:0010390 histone monoubiquitination(GO:0010390)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 0.2 GO:0051952 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.0 0.2 GO:0034765 regulation of transmembrane transport(GO:0034762) regulation of ion transmembrane transport(GO:0034765)
0.0 0.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.3 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.0 0.7 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.0 0.1 GO:0010226 response to lithium ion(GO:0010226)
0.0 0.0 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.0 0.1 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.0 0.3 GO:0009827 plant-type cell wall modification(GO:0009827)
0.0 0.1 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.0 0.1 GO:0042350 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.0 0.4 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.1 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.0 0.3 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.0 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0 0.3 GO:0031396 regulation of protein ubiquitination(GO:0031396)
0.0 0.2 GO:0008535 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 1.7 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.2 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.0 0.6 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.1 GO:0007050 cell cycle arrest(GO:0007050)
0.0 0.1 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.0 1.2 GO:0006897 endocytosis(GO:0006897)
0.0 0.4 GO:0000373 Group II intron splicing(GO:0000373)
0.0 1.8 GO:0016579 protein deubiquitination(GO:0016579)
0.0 2.4 GO:0080167 response to karrikin(GO:0080167)
0.0 0.1 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.4 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.4 GO:0006301 postreplication repair(GO:0006301)
0.0 0.2 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.1 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531)
0.0 0.6 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.3 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.5 GO:0010091 trichome branching(GO:0010091)
0.0 0.0 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.0 0.3 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.7 GO:0048825 cotyledon development(GO:0048825)
0.0 0.2 GO:0046889 positive regulation of lipid biosynthetic process(GO:0046889)
0.0 1.2 GO:0034605 cellular response to heat(GO:0034605)
0.0 1.0 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.1 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.2 GO:1902222 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.0 0.1 GO:0000730 DNA recombinase assembly(GO:0000730)
0.0 0.3 GO:0006596 polyamine biosynthetic process(GO:0006596)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.1 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.0 0.3 GO:0000038 very long-chain fatty acid metabolic process(GO:0000038)
0.0 0.2 GO:0034614 cellular response to reactive oxygen species(GO:0034614)
0.0 0.3 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.0 0.2 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 0.3 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 0.2 GO:0000103 sulfate assimilation(GO:0000103)
0.0 0.2 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.0 0.3 GO:0060627 regulation of vesicle-mediated transport(GO:0060627)
0.0 0.3 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.4 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.0 1.7 GO:0007005 mitochondrion organization(GO:0007005)
0.0 0.4 GO:0006862 nucleotide transport(GO:0006862)
0.0 5.5 GO:0006412 translation(GO:0006412)
0.0 0.1 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 0.2 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.2 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.2 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.2 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.0 0.2 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.1 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 0.1 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.2 GO:0006275 regulation of DNA replication(GO:0006275)
0.0 0.0 GO:0090603 sieve element differentiation(GO:0090603)
0.0 0.1 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.1 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.2 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.1 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.8 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0048455 stamen formation(GO:0048455)
0.0 0.1 GO:0006089 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.1 GO:0080190 lateral growth(GO:0080190)
0.0 0.1 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.4 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.0 0.2 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.3 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.0 0.2 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.7 GO:0010941 regulation of cell death(GO:0010941)
0.0 0.1 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.0 0.1 GO:0008361 regulation of cell size(GO:0008361)
0.0 0.0 GO:0009099 valine biosynthetic process(GO:0009099)
0.0 0.3 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 0.7 GO:0071383 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) cellular response to steroid hormone stimulus(GO:0071383)
0.0 0.1 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.8 GO:0006364 rRNA processing(GO:0006364)
0.0 0.7 GO:0042545 cell wall modification(GO:0042545)
0.0 0.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.0 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.0 0.4 GO:0042176 regulation of protein catabolic process(GO:0042176)
0.0 0.2 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.2 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.0 GO:0045995 regulation of embryonic development(GO:0045995)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.2 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.3 0.9 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.3 0.9 GO:0009925 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.3 3.2 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.3 2.0 GO:0016363 nuclear matrix(GO:0016363)
0.3 1.0 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 0.7 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.2 1.1 GO:0034515 proteasome storage granule(GO:0034515)
0.2 1.1 GO:0031597 cytosolic proteasome complex(GO:0031597)
0.2 1.5 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.2 1.0 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.2 1.3 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.2 1.8 GO:0042555 MCM complex(GO:0042555)
0.2 0.7 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.2 1.0 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.2 1.6 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.2 1.0 GO:0009346 citrate lyase complex(GO:0009346)
0.2 0.8 GO:0009897 external side of plasma membrane(GO:0009897)
0.2 1.4 GO:0000930 gamma-tubulin complex(GO:0000930)
0.2 0.6 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 0.4 GO:0005785 signal recognition particle receptor complex(GO:0005785)
0.1 1.2 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.9 GO:0090395 plant cell papilla(GO:0090395)
0.1 1.6 GO:0045298 tubulin complex(GO:0045298)
0.1 0.3 GO:0045254 pyruvate dehydrogenase complex(GO:0045254)
0.1 0.4 GO:0030874 nucleolar chromatin(GO:0030874)
0.1 3.0 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.8 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 0.7 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 0.9 GO:0055037 recycling endosome(GO:0055037)
0.1 1.3 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.4 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 0.4 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.1 0.5 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.1 1.3 GO:0005876 spindle microtubule(GO:0005876)
0.1 0.2 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 0.7 GO:0030897 HOPS complex(GO:0030897)
0.1 0.6 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.1 1.0 GO:0008180 COP9 signalosome(GO:0008180)
0.1 1.1 GO:0000974 Prp19 complex(GO:0000974)
0.1 0.4 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.3 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 0.5 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.9 GO:0035861 site of double-strand break(GO:0035861)
0.1 0.3 GO:0009547 plastid ribosome(GO:0009547)
0.1 0.3 GO:0010330 cellulose synthase complex(GO:0010330)
0.1 0.7 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.6 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.3 GO:0018444 translation release factor complex(GO:0018444)
0.1 1.4 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 1.0 GO:0072686 mitotic spindle(GO:0072686)
0.1 1.2 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 1.2 GO:0070461 SAGA-type complex(GO:0070461)
0.1 0.2 GO:0005846 nuclear cap binding complex(GO:0005846)
0.1 0.3 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.2 GO:0019866 organelle inner membrane(GO:0019866)
0.1 0.2 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.1 0.5 GO:0035619 root hair tip(GO:0035619)
0.1 0.1 GO:0031897 Tic complex(GO:0031897)
0.1 1.4 GO:0009574 preprophase band(GO:0009574)
0.1 0.2 GO:0005682 U5 snRNP(GO:0005682)
0.1 1.1 GO:0005769 early endosome(GO:0005769)
0.1 0.4 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.1 0.3 GO:0010007 magnesium chelatase complex(GO:0010007)
0.1 1.1 GO:0030119 AP-type membrane coat adaptor complex(GO:0030119)
0.1 0.3 GO:0034715 pICln-Sm protein complex(GO:0034715) SMN-Sm protein complex(GO:0034719)
0.1 10.0 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.8 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.1 0.2 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 0.2 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 0.3 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 0.5 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.3 GO:0071013 catalytic step 2 spliceosome(GO:0071013)
0.1 0.2 GO:0097344 Rix1 complex(GO:0097344)
0.1 0.5 GO:0000776 kinetochore(GO:0000776)
0.1 0.9 GO:0045275 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.1 1.2 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.1 0.5 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 0.2 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.5 GO:0005844 polysome(GO:0005844)
0.1 1.3 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.1 0.5 GO:0016272 prefoldin complex(GO:0016272)
0.1 25.7 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 1.6 GO:0005643 nuclear pore(GO:0005643)
0.1 0.3 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 4.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.6 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.0 1.2 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.2 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.0 0.5 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 1.0 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 0.9 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.3 GO:0000796 condensin complex(GO:0000796)
0.0 0.2 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 1.4 GO:0009504 cell plate(GO:0009504)
0.0 1.7 GO:0005635 nuclear envelope(GO:0005635)
0.0 5.4 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.3 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.5 GO:0030686 90S preribosome(GO:0030686)
0.0 0.3 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 2.1 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.2 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 2.4 GO:0000502 proteasome complex(GO:0000502)
0.0 2.2 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.5 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.0 1.6 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.2 GO:0035061 interchromatin granule(GO:0035061)
0.0 0.5 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.4 GO:0030118 clathrin coat(GO:0030118) clathrin vesicle coat(GO:0030125) clathrin-coated vesicle membrane(GO:0030665)
0.0 0.2 GO:0044450 microtubule organizing center part(GO:0044450)
0.0 0.9 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.8 GO:0005871 kinesin complex(GO:0005871)
0.0 0.3 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.0 0.1 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 2.3 GO:0044445 cytosolic part(GO:0044445)
0.0 0.4 GO:0009986 cell surface(GO:0009986)
0.0 2.7 GO:0031969 chloroplast membrane(GO:0031969)
0.0 0.7 GO:0031350 intrinsic component of plastid membrane(GO:0031350) integral component of plastid membrane(GO:0031351)
0.0 0.5 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.2 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 4.6 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.5 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 2.6 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.1 GO:0000243 commitment complex(GO:0000243)
0.0 0.2 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 7.1 GO:0005730 nucleolus(GO:0005730)
0.0 0.8 GO:0099503 secretory vesicle(GO:0099503)
0.0 3.4 GO:0005740 mitochondrial envelope(GO:0005740)
0.0 0.3 GO:0017119 Golgi transport complex(GO:0017119)
0.0 14.8 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.5 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.3 GO:0005819 spindle(GO:0005819)
0.0 0.2 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.0 2.2 GO:0048046 apoplast(GO:0048046)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.3 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.2 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.3 GO:0055028 cortical microtubule(GO:0055028)
0.0 0.1 GO:0005775 vacuolar lumen(GO:0005775)
0.0 0.9 GO:0005770 late endosome(GO:0005770)
0.0 5.3 GO:0005774 vacuolar membrane(GO:0005774)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 2.3 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.1 GO:0005884 actin filament(GO:0005884)
0.0 3.8 GO:0009506 cell-cell junction(GO:0005911) plasmodesma(GO:0009506) cell junction(GO:0030054) symplast(GO:0055044)
0.0 9.4 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.9 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 0.5 GO:0016592 mediator complex(GO:0016592)
0.0 0.0 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 0.1 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.1 GO:0090544 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.0 0.1 GO:0009522 photosystem I(GO:0009522)
0.0 3.1 GO:0005773 vacuole(GO:0005773)
0.0 25.6 GO:0005886 plasma membrane(GO:0005886)
0.0 0.1 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.4 GO:0030532 small nuclear ribonucleoprotein complex(GO:0030532)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.8 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.5 1.4 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.5 1.4 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.4 1.5 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.4 1.5 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.4 1.1 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.4 1.1 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.4 2.9 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.3 0.3 GO:0005034 osmosensor activity(GO:0005034)
0.3 4.0 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.3 1.0 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.3 4.7 GO:0016157 sucrose synthase activity(GO:0016157)
0.3 0.9 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.3 1.2 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.3 0.9 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.3 1.5 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.3 0.9 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.3 3.6 GO:0002020 protease binding(GO:0002020)
0.3 1.0 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.3 1.0 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.3 1.0 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.2 1.0 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.2 0.9 GO:0019172 glyoxalase III activity(GO:0019172)
0.2 1.2 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.2 0.7 GO:0008936 nicotinamidase activity(GO:0008936)
0.2 0.2 GO:0000406 double-strand/single-strand DNA junction binding(GO:0000406)
0.2 1.8 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.2 0.7 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.2 0.7 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.2 0.9 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.2 1.1 GO:0003680 AT DNA binding(GO:0003680)
0.2 0.7 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.2 0.6 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.2 0.9 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 2.4 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.2 1.0 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.2 0.6 GO:0009374 biotin binding(GO:0009374)
0.2 1.4 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.2 0.6 GO:0004488 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.2 0.8 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 0.8 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.2 0.5 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.2 1.1 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.2 0.5 GO:0070678 preprotein binding(GO:0070678)
0.2 1.4 GO:0008026 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 0.5 GO:0005046 KDEL sequence binding(GO:0005046)
0.2 1.7 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.2 1.0 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 0.7 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 1.0 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 0.5 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.2 0.8 GO:0034511 U3 snoRNA binding(GO:0034511)
0.2 2.4 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.2 0.5 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.2 0.8 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 0.5 GO:0008517 folic acid transporter activity(GO:0008517)
0.2 1.2 GO:0001653 peptide receptor activity(GO:0001653)
0.2 0.5 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.1 1.0 GO:0004738 pyruvate dehydrogenase activity(GO:0004738)
0.1 0.4 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.1 0.7 GO:0004333 fumarate hydratase activity(GO:0004333)
0.1 0.7 GO:0016768 spermine synthase activity(GO:0016768)
0.1 0.4 GO:0051738 xanthophyll binding(GO:0051738)
0.1 0.6 GO:0070182 DNA polymerase binding(GO:0070182)
0.1 0.4 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.1 0.6 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.8 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.1 1.2 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.4 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.1 0.4 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 1.4 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.4 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 0.4 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.1 0.4 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 0.5 GO:0070628 proteasome binding(GO:0070628)
0.1 0.6 GO:0030371 translation repressor activity(GO:0030371)
0.1 1.0 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 0.4 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.1 2.3 GO:0005504 fatty acid binding(GO:0005504)
0.1 0.4 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.8 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.6 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.8 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.5 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 1.9 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 0.4 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.1 0.3 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.1 0.3 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.1 2.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.5 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.8 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.1 0.3 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.1 0.5 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.6 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
0.1 0.2 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.1 0.6 GO:0008199 ferric iron binding(GO:0008199)
0.1 1.0 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.1 1.3 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.6 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 0.4 GO:0004348 glucosylceramidase activity(GO:0004348)
0.1 0.9 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.4 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 1.8 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 9.0 GO:0051082 unfolded protein binding(GO:0051082)
0.1 0.3 GO:0046422 violaxanthin de-epoxidase activity(GO:0046422)
0.1 0.4 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 0.3 GO:0015180 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.1 0.5 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.1 0.4 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 0.5 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.1 0.4 GO:0035175 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.1 0.8 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 2.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.4 GO:0051740 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 0.4 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 0.8 GO:0004845 uracil phosphoribosyltransferase activity(GO:0004845)
0.1 1.7 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.3 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.1 1.1 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.1 0.6 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 0.1 GO:0031409 pigment binding(GO:0031409)
0.1 0.7 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.1 1.2 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 1.4 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 0.5 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 1.1 GO:0070403 NAD+ binding(GO:0070403)
0.1 1.5 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.9 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.7 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 1.9 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.1 0.2 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 0.6 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1 1.1 GO:0019210 kinase inhibitor activity(GO:0019210)
0.1 0.1 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.1 1.2 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 2.2 GO:0048029 monosaccharide binding(GO:0048029)
0.1 0.2 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.1 1.6 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.9 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.3 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.1 0.2 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 1.1 GO:0030515 snoRNA binding(GO:0030515)
0.1 1.0 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.3 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.1 GO:0052736 beta-glucanase activity(GO:0052736)
0.1 0.3 GO:0030295 kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.1 0.4 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.4 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 0.4 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 0.5 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1 0.3 GO:0080161 auxin influx transmembrane transporter activity(GO:0010328) auxin transmembrane transporter activity(GO:0080161)
0.1 0.2 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.7 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.7 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 0.3 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.1 0.4 GO:0046592 polyamine oxidase activity(GO:0046592)
0.1 0.7 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.3 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.6 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 0.5 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.6 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.7 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.2 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.2 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.1 0.2 GO:0015556 C4-dicarboxylate transmembrane transporter activity(GO:0015556)
0.1 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.2 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.1 0.6 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 0.2 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 1.2 GO:0043424 protein histidine kinase binding(GO:0043424)
0.1 0.3 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.1 0.9 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.4 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.1 0.4 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.2 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.2 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.1 0.3 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 2.4 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.1 0.2 GO:0052594 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.1 0.3 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0047780 citrate dehydratase activity(GO:0047780)
0.0 0.9 GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769)
0.0 0.5 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.1 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.0 0.2 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.1 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.0 0.9 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.4 GO:0045182 translation regulator activity(GO:0045182)
0.0 0.2 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.0 2.8 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.2 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 0.6 GO:0051117 ATPase binding(GO:0051117)
0.0 0.3 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 2.4 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.3 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.0 0.3 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.3 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.0 0.4 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.3 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.0 0.5 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 0.9 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.4 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.2 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.0 0.2 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.2 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.0 1.1 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 0.2 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.0 4.6 GO:0009055 electron carrier activity(GO:0009055)
0.0 1.2 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 1.5 GO:0015216 purine nucleotide transmembrane transporter activity(GO:0015216)
0.0 0.4 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.3 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 9.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.3 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.3 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.0 0.3 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 1.1 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.1 GO:0004560 alpha-L-fucosidase activity(GO:0004560) fucosidase activity(GO:0015928)
0.0 0.1 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.0 0.3 GO:0043495 protein anchor(GO:0043495)
0.0 0.3 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 1.3 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.2 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.3 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 1.1 GO:0016597 amino acid binding(GO:0016597)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.6 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 1.7 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 5.1 GO:0003924 GTPase activity(GO:0003924)
0.0 0.1 GO:0008187 poly-pyrimidine tract binding(GO:0008187)
0.0 0.3 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions(GO:0016722) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.1 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.1 GO:0030332 cyclin binding(GO:0030332)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.4 GO:0016411 acylglycerol O-acyltransferase activity(GO:0016411)
0.0 2.0 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.3 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.0 0.1 GO:0008909 isochorismate synthase activity(GO:0008909) intramolecular transferase activity, transferring hydroxy groups(GO:0050486)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.2 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.1 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.0 0.3 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.0 0.2 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.1 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.3 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.4 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.0 1.9 GO:0003777 microtubule motor activity(GO:0003777)
0.0 2.0 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.5 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.0 0.1 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.0 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.0 0.4 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.1 GO:0019843 rRNA binding(GO:0019843)
0.0 0.3 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.1 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.0 0.3 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.6 GO:0032934 sterol binding(GO:0032934)
0.0 1.3 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.6 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0005496 steroid binding(GO:0005496)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 1.0 GO:0043621 protein self-association(GO:0043621)
0.0 0.1 GO:0070140 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific endopeptidase activity(GO:0070139) SUMO-specific isopeptidase activity(GO:0070140)
0.0 0.4 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.8 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 0.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.3 GO:0003996 acyl-CoA ligase activity(GO:0003996) long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.0 1.4 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.1 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.2 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.0 0.3 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.5 GO:0004568 chitinase activity(GO:0004568)
0.0 0.3 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.1 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.5 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.1 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.9 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.1 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.1 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.0 0.8 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.6 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.1 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.0 0.6 GO:0043130 ubiquitin binding(GO:0043130)
0.0 2.0 GO:0042626 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 0.5 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.0 0.0 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.1 GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity(GO:0050362) L-tryptophan aminotransferase activity(GO:0070529)
0.0 0.1 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.0 0.1 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.0 0.0 GO:0004072 aspartate kinase activity(GO:0004072)
0.0 0.1 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.1 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.2 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 0.2 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.0 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.0 0.3 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.2 GO:0030276 clathrin binding(GO:0030276)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.9 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.1 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.0 0.2 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.0 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 0.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 2.2 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.7 GO:0005198 structural molecule activity(GO:0005198)
0.0 0.0 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.1 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.1 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.0 0.4 GO:0016876 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 0.1 GO:0004834 tryptophan synthase activity(GO:0004834)
0.0 0.4 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.0 0.1 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.0 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.2 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.0 0.2 GO:0015399 primary active transmembrane transporter activity(GO:0015399) P-P-bond-hydrolysis-driven transmembrane transporter activity(GO:0015405)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.2 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.3 0.3 PID IL4 2PATHWAY IL4-mediated signaling events
0.2 1.5 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.2 0.6 PID MYC PATHWAY C-MYC pathway
0.1 0.8 PID PLK1 PATHWAY PLK1 signaling events
0.1 0.1 PID EPHA2 FWD PATHWAY EPHA2 forward signaling
0.1 0.3 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.1 0.2 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.1 0.3 SIG CHEMOTAXIS Genes related to chemotaxis
0.1 0.4 PID S1P S1P1 PATHWAY S1P1 pathway
0.1 0.6 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.3 PID NOTCH PATHWAY Notch signaling pathway
0.1 0.3 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 0.3 PID IFNG PATHWAY IFN-gamma pathway
0.1 0.3 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.5 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.4 PID ATR PATHWAY ATR signaling pathway
0.0 0.2 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.2 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.0 0.2 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.0 0.1 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.0 0.3 PID E2F PATHWAY E2F transcription factor network
0.0 0.3 PID CXCR4 PATHWAY CXCR4-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.2 0.9 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.2 0.8 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.2 0.6 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.2 1.3 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 0.5 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.7 REACTOME SIGNALING BY NOTCH1 Genes involved in Signaling by NOTCH1
0.1 0.1 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.1 0.5 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.1 0.6 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 0.3 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.1 0.3 REACTOME SIGNALING BY NOTCH Genes involved in Signaling by NOTCH
0.1 0.5 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.3 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 1.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.4 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.6 REACTOME HEMOSTASIS Genes involved in Hemostasis
0.1 0.5 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.1 1.7 REACTOME TRANSLATION Genes involved in Translation
0.0 0.3 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.2 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.0 0.5 REACTOME LAGGING STRAND SYNTHESIS Genes involved in Lagging Strand Synthesis
0.0 1.0 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.2 REACTOME G ALPHA I SIGNALLING EVENTS Genes involved in G alpha (i) signalling events
0.0 0.0 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis