Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT1G75080

Z-value: 0.92

Transcription factors associated with AT1G75080

Gene Symbol Gene ID Gene Info
AT1G75080 Brassinosteroid signaling positive regulator (BZR1) family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BZR1arTal_v1_Chr1_+_28185504_28185504-0.893.6e-10Click!

Activity profile of AT1G75080 motif

Sorted Z-values of AT1G75080 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_3157501 6.66 AT1G09750.1
Eukaryotic aspartyl protease family protein
Chr5_-_25343369 5.37 AT5G63180.1
Pectin lyase-like superfamily protein
Chr3_+_23345754 4.47 AT3G63200.1
PATATIN-like protein 9
Chr3_-_4744263 4.26 AT3G14240.1
Subtilase family protein
Chr2_-_15137012 4.23 AT2G36050.1
ovate family protein 15
Chr5_+_7502427 4.12 AT5G22580.1
Stress responsive A/B Barrel Domain-containing protein
Chr1_+_25401514 4.01 AT1G67750.1
Pectate lyase family protein
Chr5_-_2185972 3.87 AT5G07030.1
Eukaryotic aspartyl protease family protein
Chr1_-_84864 3.86 AT1G01190.1
AT1G01190.2
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr1_+_5058583 3.72 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
purple acid phosphatase 3
Chr5_-_18371021 3.65 AT5G45340.2
AT5G45340.1
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr1_+_310169 3.54 AT1G01900.1
subtilase family protein
Chr4_-_15059846 3.48 AT4G30950.1
fatty acid desaturase 6
Chr1_+_28428671 3.46 AT1G75710.1
C2H2-like zinc finger protein
Chr2_-_16908152 3.31 AT2G40475.1
hypothetical protein
Chr4_-_18165740 3.28 AT4G38970.2
fructose-bisphosphate aldolase 2
Chr4_-_18166008 3.28 AT4G38970.1
fructose-bisphosphate aldolase 2
Chr3_-_6436046 3.27 AT3G18710.1
plant U-box 29
Chr1_+_23911024 3.26 AT1G64390.1
glycosyl hydrolase 9C2
Chr3_-_2130451 3.20 AT3G06750.1
hydroxyproline-rich glycoprotein family protein
Chr4_+_4886962 3.16 AT4G08040.1
1-aminocyclopropane-1-carboxylate synthase 11
Chr1_-_28603932 3.14 AT1G76240.1
DUF241 domain protein (DUF241)
Chr4_+_9780224 3.08 AT4G17560.1
Ribosomal protein L19 family protein
Chr1_-_19052582 3.07 AT1G51400.1
Photosystem II 5 kD protein
Chr5_-_26501955 3.05 AT5G66330.1
Leucine-rich repeat (LRR) family protein
Chr3_+_20780175 3.01 AT3G55990.1
trichome birefringence-like protein (DUF828)
Chr3_+_11252807 3.01 AT3G29320.1
Glycosyl transferase, family 35
Chr3_+_8194606 2.84 AT3G23050.1
AT3G23050.3
AT3G23050.2
indole-3-acetic acid 7
Chr1_+_23144385 2.80 AT1G62520.1
sulfated surface-like glycoprotein
Chr5_-_4299264 2.77 AT5G13400.1
Major facilitator superfamily protein
Chr3_-_22972239 2.76 AT3G62020.2
AT3G62020.1
germin-like protein 10
Chr4_-_14872267 2.74 AT4G30410.1
AT4G30410.2
sequence-specific DNA binding transcription factor
Chr2_+_17527167 2.71 AT2G41990.1
late embryogenesis abundant protein
Chr1_+_568558 2.56 AT1G02650.2
AT1G02650.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_23137254 2.53 AT1G62510.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_16569051 2.53 AT3G45230.1
hydroxyproline-rich glycoprotein family protein
Chr5_-_3709403 2.52 AT5G11550.1
ARM repeat superfamily protein
Chr3_-_17658353 2.48 AT3G47860.1
chloroplastic lipocalin
Chr4_+_11880080 2.46 AT4G22560.1
sulfated surface-like glycoprotein
Chr1_-_21418115 2.43 AT1G57820.1
AT1G57820.3
Zinc finger (C3HC4-type RING finger) family protein
Chr5_-_19404147 2.42 AT5G47920.1
transcription elongation factor
Chr1_+_4934120 2.41 AT1G14430.1
glyoxal oxidase-related protein
Chr1_-_28159317 2.40 AT1G74970.1
ribosomal protein S9
Chr5_-_24640639 2.27 AT5G61270.3
AT5G61270.1
AT5G61270.2
phytochrome-interacting factor7
Chr2_+_539898 2.22 AT2G02130.1
low-molecular-weight cysteine-rich 68
Chr5_+_7168106 2.20 AT5G21100.1
Plant L-ascorbate oxidase
Chr4_-_12068538 2.18 AT4G23020.2
AT4G23020.1
hypothetical protein
Chr2_+_8063023 2.14 AT2G18570.1
UDP-Glycosyltransferase superfamily protein
Chr2_+_19109513 2.12 AT2G46535.1
hypothetical protein
Chr1_+_4159227 2.09 AT1G12250.1
AT1G12250.3
AT1G12250.2
Pentapeptide repeat-containing protein
Chr3_-_17138259 2.09 AT3G46550.1
Fasciclin-like arabinogalactan family protein
Chr3_-_18883033 2.05 AT3G50800.1
hypothetical protein
Chr3_-_5153642 2.05 AT3G15310.1

Chr3_-_21805335 2.05 AT3G59010.1
pectin methylesterase 61
Chr5_+_568425 2.04 AT5G02540.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_8059106 2.03 AT2G18560.1
UDP-Glycosyltransferase superfamily protein
Chr1_+_564018 2.02 AT1G02640.1
beta-xylosidase 2
Chr1_-_21417937 2.00 AT1G57820.2
Zinc finger (C3HC4-type RING finger) family protein
Chr4_+_8360996 1.99 AT4G14560.1
indole-3-acetic acid inducible
Chr1_-_23812725 1.98 AT1G64150.1
Uncharacterized protein family (UPF0016)
Chr3_-_23344801 1.96 AT3G63190.1
ribosome recycling factor, chloroplast precursor
Chr5_+_26573964 1.95 AT5G66590.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr2_-_8983814 1.93 AT2G20875.1
epidermal patterning factor 1
Chr4_+_11941001 1.92 AT4G22730.2
AT4G22730.1
Leucine-rich repeat protein kinase family protein
Chr4_-_17242030 1.88 AT4G36530.1
AT4G36530.2
alpha/beta-Hydrolases superfamily protein
Chr5_-_17635915 1.87 AT5G43870.1
AT5G43870.2
auxin canalization protein (DUF828)
Chr1_+_18542061 1.85 AT1G50040.1
formin-like protein, putative (DUF1005)
Chr2_+_15860627 1.84 AT2G37880.1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr4_-_2118617 1.81 AT4G04330.1
Chaperonin-like RbcX protein
Chr4_+_13120824 1.81 AT4G25780.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr2_-_15725022 1.80 AT2G37450.2
AT2G37450.3
AT2G37450.1
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_11290360 1.78 AT2G26540.1
AT2G26540.2
AT2G26540.3
uroporphyrinogen-III synthase family protein
Chr3_-_1643174 1.78 AT3G05640.2
AT3G05640.1
AT3G05640.3
Protein phosphatase 2C family protein
Chr5_+_3157980 1.76 AT5G10100.2
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_19658124 1.75 AT3G53010.1
carbohydrate esterase, putative (DUF303)
Chr4_-_18472048 1.74 AT4G39800.1
myo-inositol-1-phosphate synthase 1
Chr2_+_16273897 1.68 AT2G38970.1
Zinc finger (C3HC4-type RING finger) family protein
Chr1_+_6679281 1.66 AT1G19320.1
Pathogenesis-related thaumatin superfamily protein
Chr5_-_2874849 1.65 AT5G09240.2
AT5G09240.1
AT5G09240.3
ssDNA-binding transcriptional regulator
Chr5_-_21154395 1.65 AT5G52060.1
BCL-2-associated athanogene 1
Chr5_-_1078304 1.64 AT5G03995.1
hypothetical protein
Chr3_-_22984566 1.64 AT3G62070.1
hypothetical protein
Chr3_-_23195917 1.63 AT3G62700.1
multidrug resistance-associated protein 10
Chr1_-_7332100 1.61 AT1G20990.1
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_6224405 1.61 AT1G18090.1
AT1G18090.2
5'-3' exonuclease family protein
Chr5_+_20993424 1.61 AT5G51670.1
AT5G51670.2
hypothetical protein (DUF668)
Chr3_-_18817405 1.61 AT3G50660.1
AT3G50660.2
Cytochrome P450 superfamily protein
Chr5_+_3047011 1.55 AT5G09805.1
inflorescence deficient in abscission (IDA)-like 3
Chr4_-_2482447 1.55 AT4G04890.1
protodermal factor 2
Chr3_+_4403355 1.54 AT3G13510.1
carboxyl-terminal peptidase, putative (DUF239)
Chr3_+_5547492 1.53 AT3G16350.1
Homeodomain-like superfamily protein
Chr4_+_17691687 1.51 AT4G37650.1
GRAS family transcription factor
Chr1_-_8763410 1.51 AT1G24764.1
AT1G24764.2
AT1G24764.3
microtubule-associated proteins 70-2
Chr2_+_8900360 1.51 AT2G20635.1
protein kinase and Mad3-BUB1-I domain-containing protein
Chr4_-_2481590 1.50 AT4G04890.2
protodermal factor 2
Chr4_-_6796398 1.47 AT4G11140.1
cytokinin response factor 1
Chr3_-_18666691 1.46 AT3G50340.1
hypothetical protein
Chr5_-_7520253 1.45 AT5G22620.2
AT5G22620.1
AT5G22620.4
AT5G22620.5
AT5G22620.6
AT5G22620.3
phosphoglycerate/bisphosphoglycerate mutase family protein
Chr5_-_442187 1.43 AT5G02220.1
cyclin-dependent kinase inhibitor
Chr4_-_13663371 1.43 AT4G27270.2
AT4G27270.1
AT4G27270.3
Quinone reductase family protein
Chr2_-_19407098 1.43 AT2G47260.1
WRKY DNA-binding protein 23
Chr1_-_10505166 1.41 AT1G29980.2
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Chr3_+_5644593 1.41 AT3G16570.1
AT3G16570.2
AT3G16570.3
rapid alkalinization factor 23
Chr1_-_24529313 1.39 AT1G65920.2
AT1G65920.1
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
Chr1_-_5165139 1.39 AT1G14970.2
AT1G14970.1
AT1G14970.3
O-fucosyltransferase family protein
Chr1_+_25861094 1.39 AT1G68810.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_13662672 1.38 AT4G27270.4
Quinone reductase family protein
Chr1_+_4474684 1.37 AT1G13130.1
Cellulase (glycosyl hydrolase family 5) protein
Chr4_-_9715648 1.37 AT4G17390.1
Ribosomal protein L23/L15e family protein
Chr1_+_12472868 1.36 AT1G34245.1
Putative membrane lipoprotein
Chr4_-_17530589 1.35 AT4G37250.1
Leucine-rich repeat protein kinase family protein
Chr5_-_20861403 1.34 AT5G51330.2
SWITCH1
Chr5_-_23409452 1.34 AT5G57785.2
hypothetical protein
Chr5_+_19174589 1.34 AT5G47225.1

Chr1_+_6331398 1.33 AT1G18400.2
AT1G18400.1
BR enhanced expression 1
Chr5_-_20861711 1.32 AT5G51330.1
SWITCH1
Chr2_+_15856528 1.32 AT2G37860.3
AT2G37860.4
AT2G37860.1
AT2G37860.2
reticulata-like protein, putative (DUF3411)
Chr4_-_8165214 1.32 AT4G14150.1
phragmoplast-associated kinesin-related protein 1
Chr1_+_761261 1.31 AT1G03160.3
AT1G03160.1
AT1G03160.2
AT1G03160.4
FZO-like protein
Chr1_+_21950503 1.31 AT1G59725.1
DNAJ heat shock family protein
Chr1_-_10506189 1.31 AT1G29980.1
choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Chr3_+_10389482 1.29 AT3G27970.1
Exonuclease family protein
Chr1_-_7989217 1.28 AT1G22600.1
Late embryogenesis abundant protein (LEA) family protein
Chr2_-_14965438 1.28 AT2G35620.1
AT2G35620.3
AT2G35620.2
Leucine-rich repeat protein kinase family protein
Chr3_-_19731519 1.28 AT3G53232.1
ROTUNDIFOLIA like 1
Chr3_+_21238223 1.26 AT3G57400.1
transmembrane protein
Chr1_-_3440359 1.26 AT1G10460.1
germin-like protein 7
Chr1_-_19795544 1.25 AT1G53130.1
Stigma-specific Stig1 family protein
Chr1_+_1748259 1.25 AT1G05810.2
Rab GTPase-like A5A protein
Chr4_+_16118830 1.24 AT4G33520.2
AT4G33520.1
AT4G33520.3
AT4G33520.4
P-type ATP-ase 1
Chr2_+_16534175 1.24 AT2G39670.1
AT2G39670.2
Radical SAM superfamily protein
Chr2_+_18314188 1.23 AT2G44340.1
VQ motif-containing protein
Chr2_+_14003128 1.23 AT2G32990.1
glycosyl hydrolase 9B8
Chr5_-_9005941 1.22 AT5G25830.1
GATA transcription factor 12
Chr3_+_919362 1.22 AT3G03710.1
polyribonucleotide nucleotidyltransferase
Chr2_-_17981309 1.21 AT2G43255.2
AT2G43255.1
O-acyltransferase WSD1-like protein
Chr1_+_1748443 1.20 AT1G05810.1
Rab GTPase-like A5A protein
Chr2_+_18582697 1.19 AT2G45050.1
GATA transcription factor 2
Chr1_-_1637914 1.19 AT1G05530.1
UDP-glucosyl transferase 75B2
Chr3_+_5433526 1.17 AT3G16010.1
Pentatricopeptide repeat (PPR-like) superfamily protein
Chr1_-_25678468 1.16 AT1G68470.1
Exostosin family protein
Chr3_+_8761419 1.16 AT3G24220.1
nine-cis-epoxycarotenoid dioxygenase 6
Chr3_-_18566834 1.15 AT3G50070.1
CYCLIN D3;3
Chr1_-_17035105 1.14 AT1G45063.1
AT1G45063.2
copper ion binding / electron carrier protein
Chr2_+_18981911 1.13 AT2G46225.3
AT2G46225.2
AT2G46225.1
ABI-1-like 1
Chr4_+_15009471 1.13 AT4G30825.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_22275484 1.13 AT1G60460.3
AT1G60460.1
AT1G60460.2
hypothetical protein
Chr1_-_20668817 1.13 AT1G55360.1
tRNA-splicing ligase (DUF239)
Chr5_+_25850509 1.13 AT5G64667.1
inflorescence deficient in abscission (IDA)-like 2
Chr1_+_28180057 1.12 AT1G75050.1
Pathogenesis-related thaumatin superfamily protein
Chr2_+_18591628 1.12 AT2G45080.1
cyclin p3;1
Chr5_-_26366002 1.12 AT5G65920.2
AT5G65920.1
ARM repeat superfamily protein
Chr5_-_23409715 1.11 AT5G57785.1
hypothetical protein
Chr1_-_26723978 1.11 AT1G70880.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr3_-_23429231 1.11 AT3G63450.4
AT3G63450.7
AT3G63450.1
AT3G63450.6
AT3G63450.3
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_23368369 1.11 AT1G63030.2
AT1G63030.1
Integrase-type DNA-binding superfamily protein
Chr1_-_25710989 1.10 AT1G68520.1
B-box type zinc finger protein with CCT domain-containing protein
Chr3_+_22379740 1.10 AT3G60550.1
cyclin p3;2
Chr2_-_9906032 1.10 AT2G23290.1
myb domain protein 70
Chr3_+_9546259 1.09 AT3G26120.1
terminal EAR1-like 1
Chr1_-_4208951 1.09 AT1G12370.3
AT1G12370.1
AT1G12370.2
photolyase 1
Chr2_-_17213179 1.09 AT2G41290.1
strictosidine synthase-like 2
Chr5_-_8494679 1.09 AT5G24750.1
UDP-Glycosyltransferase superfamily protein
Chr5_-_1558486 1.08 AT5G05250.1
hypothetical protein
Chr5_+_20729431 1.08 AT5G50950.2
FUMARASE 2
Chr4_-_11648644 1.08 AT4G21960.1
Peroxidase superfamily protein
Chr3_+_6227341 1.08 AT3G18170.2
Glycosyltransferase family 61 protein
Chr5_+_20729612 1.08 AT5G50950.4
AT5G50950.1
FUMARASE 2
Chr1_-_20559103 1.08 AT1G55100.1

Chr1_-_21063047 1.07 AT1G56250.1
phloem protein 2-B14
Chr1_-_4281131 1.07 AT1G12570.1
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr1_+_22277249 1.06 AT1G60460.5
hypothetical protein
Chr3_-_18283194 1.06 AT3G49307.1
Expressed protein
Chr1_+_23004499 1.06 AT1G62270.1
F-box and associated interaction domains-containing protein
Chr1_+_22276593 1.06 AT1G60460.4
hypothetical protein
Chr4_-_9555865 1.06 AT4G16970.1
Protein kinase superfamily protein
Chr1_-_18430497 1.05 AT1G49780.1
plant U-box 26
Chr4_-_5401591 1.04 AT4G08490.1

Chr3_+_10445841 1.04 AT3G28060.1
Nodulin MtN21 /EamA-like transporter family protein
Chr5_-_827502 1.04 AT5G03370.1
acylphosphatase family
Chr5_-_5271860 1.04 AT5G16140.2
AT5G16140.1
Peptidyl-tRNA hydrolase family protein
Chr2_-_14965207 1.03 AT2G35620.4
Leucine-rich repeat protein kinase family protein
Chr4_-_16211426 1.02 AT4G33800.2
AT4G33800.1
hypothetical protein
Chr2_+_16704063 1.02 AT2G40004.1
transmembrane protein
Chr1_-_5501856 1.01 AT1G16022.1
transmembrane protein
Chr5_+_20730565 1.01 AT5G50950.3
FUMARASE 2
Chr5_+_21286735 1.01 AT5G52440.1
Bacterial sec-independent translocation protein mttA/Hcf106
Chr1_-_17238185 1.01 AT1G46480.1
AT1G46480.2
WUSCHEL related homeobox 4
Chr5_-_21651626 1.00 AT5G53370.1
AT5G53370.2
pectin methylesterase PCR fragment F
Chr5_-_1894124 1.00 AT5G06250.2
AT5G06250.1
AT5G06250.3
AT5G06250.4
AT5G06250.5
AP2/B3-like transcriptional factor family protein
Chr3_-_12666444 1.00 AT3G31023.1

Chr4_+_1256144 0.99 AT4G02810.1
FANTASTIC four-like protein (DUF3049)
Chr3_-_3620064 0.99 AT3G11490.1
rac GTPase activating protein
Chr2_+_16055289 0.99 AT2G38320.2
AT2G38320.1
TRICHOME BIREFRINGENCE-LIKE 34
Chr4_+_9128900 0.98 AT4G16140.1
proline-rich family protein
Chr1_+_28750872 0.98 AT1G76610.1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr1_+_9312936 0.98 AT1G26870.1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr3_+_21426285 0.98 AT3G57860.1
UV-B-insensitive 4-like protein
Chr4_-_17334355 0.98 AT4G36780.1
BES1/BZR1 homolog 2
Chr1_+_176141 0.98 AT1G01480.2
1-amino-cyclopropane-1-carboxylate synthase 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G75080

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 4.4 GO:0090309 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.7 2.2 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.6 3.2 GO:0006106 fumarate metabolic process(GO:0006106)
0.6 3.7 GO:0016107 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.6 3.0 GO:0005980 glycogen catabolic process(GO:0005980)
0.6 1.7 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.5 2.1 GO:0045827 negative regulation of isoprenoid metabolic process(GO:0045827)
0.5 2.5 GO:1901562 response to paraquat(GO:1901562)
0.4 1.7 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.4 1.9 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.4 1.5 GO:0009660 amyloplast organization(GO:0009660)
0.4 4.4 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.4 6.6 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.3 1.7 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.3 1.0 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.3 1.3 GO:1902446 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.3 1.0 GO:0017145 stem cell division(GO:0017145)
0.3 1.0 GO:0031397 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.3 1.0 GO:0036292 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.3 3.5 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.3 1.2 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.3 0.9 GO:0010541 acropetal auxin transport(GO:0010541)
0.3 1.3 GO:0000914 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) phragmoplast microtubule organization(GO:0080175) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.3 1.3 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.3 2.6 GO:0010358 leaf shaping(GO:0010358)
0.3 1.3 GO:0015074 nucleotide-excision repair, DNA gap filling(GO:0006297) DNA integration(GO:0015074)
0.3 3.3 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.3 2.0 GO:0031222 arabinan catabolic process(GO:0031222)
0.3 1.5 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.2 2.4 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.2 1.4 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 2.7 GO:0045144 female meiotic division(GO:0007143) meiotic sister chromatid segregation(GO:0045144) meiotic sister chromatid cohesion(GO:0051177)
0.2 1.1 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.2 1.5 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.2 3.0 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 2.8 GO:0010274 hydrotropism(GO:0010274)
0.2 0.8 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.2 1.0 GO:0019419 sulfate reduction(GO:0019419)
0.2 0.6 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.2 0.2 GO:0048654 anther morphogenesis(GO:0048654) anther wall tapetum morphogenesis(GO:0048655)
0.2 2.8 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.2 1.1 GO:0000719 photoreactive repair(GO:0000719) UV protection(GO:0009650)
0.2 1.2 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.2 1.6 GO:0009799 specification of symmetry(GO:0009799)
0.2 0.7 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.2 1.3 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.2 2.4 GO:0010161 red light signaling pathway(GO:0010161)
0.2 0.5 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 1.1 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 2.3 GO:0009704 de-etiolation(GO:0009704)
0.2 2.0 GO:0032544 plastid translation(GO:0032544)
0.1 13.1 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.6 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.1 0.4 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 1.0 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.4 GO:0010254 nectary development(GO:0010254)
0.1 4.8 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.4 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 0.7 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 2.7 GO:0010227 floral organ abscission(GO:0010227)
0.1 0.4 GO:0050891 response to humidity(GO:0009270) regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.1 1.8 GO:0046501 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.1 0.1 GO:0043181 vacuolar sequestering(GO:0043181)
0.1 0.9 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.6 GO:1904961 quiescent center organization(GO:1904961)
0.1 2.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 0.4 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.1 1.2 GO:0070475 rRNA base methylation(GO:0070475)
0.1 3.1 GO:0010193 response to ozone(GO:0010193)
0.1 4.3 GO:0016485 protein processing(GO:0016485)
0.1 0.6 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.1 1.7 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.1 1.1 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.1 2.2 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.1 0.7 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.6 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.1 0.3 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 2.1 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 0.9 GO:0051026 chiasma assembly(GO:0051026)
0.1 0.8 GO:0034063 stress granule assembly(GO:0034063)
0.1 0.2 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 1.2 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 1.6 GO:0045927 positive regulation of growth(GO:0045927)
0.1 3.1 GO:0061077 chaperone-mediated protein folding(GO:0061077)
0.1 2.2 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.1 0.6 GO:0071484 cellular response to light intensity(GO:0071484)
0.1 0.5 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.1 0.6 GO:0015749 monosaccharide transport(GO:0015749)
0.1 0.6 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.7 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.0 1.4 GO:0045926 negative regulation of growth(GO:0045926)
0.0 1.9 GO:0048825 cotyledon development(GO:0048825)
0.0 1.1 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 0.7 GO:0001709 cell fate determination(GO:0001709)
0.0 0.6 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.0 0.7 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.6 GO:0071514 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.0 0.5 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.6 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.3 GO:0008300 isoprenoid catabolic process(GO:0008300) carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.0 1.1 GO:0030838 positive regulation of actin filament polymerization(GO:0030838) actin nucleation(GO:0045010)
0.0 0.6 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.6 GO:0019852 L-ascorbic acid metabolic process(GO:0019852)
0.0 0.3 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 1.4 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.7 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.3 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.2 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.7 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.2 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.0 2.2 GO:0080167 response to karrikin(GO:0080167)
0.0 0.4 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.0 1.9 GO:0009630 gravitropism(GO:0009630)
0.0 0.5 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 0.2 GO:0098781 ncRNA transcription(GO:0098781)
0.0 0.6 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.7 GO:0009851 auxin biosynthetic process(GO:0009851)
0.0 0.8 GO:0022611 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.0 0.4 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.0 1.1 GO:0007267 cell-cell signaling(GO:0007267)
0.0 1.5 GO:0009627 systemic acquired resistance(GO:0009627)
0.0 0.6 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.8 GO:0042127 regulation of cell proliferation(GO:0042127)
0.0 1.0 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.3 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 1.3 GO:0009648 photoperiodism(GO:0009648)
0.0 0.8 GO:0010119 regulation of stomatal movement(GO:0010119)
0.0 0.1 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.0 0.1 GO:0030834 regulation of actin filament depolymerization(GO:0030834)
0.0 0.6 GO:0048767 root hair elongation(GO:0048767)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 4.6 GO:0010369 chromocenter(GO:0010369)
0.4 2.1 GO:0009897 external side of plasma membrane(GO:0009897)
0.3 1.0 GO:0033281 TAT protein transport complex(GO:0033281)
0.3 1.3 GO:0032807 DNA ligase IV complex(GO:0032807)
0.3 3.0 GO:0016272 prefoldin complex(GO:0016272)
0.3 2.4 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.3 1.5 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.2 3.5 GO:0031012 extracellular matrix(GO:0031012)
0.1 3.2 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.1 0.8 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 1.1 GO:0031209 SCAR complex(GO:0031209)
0.1 6.6 GO:0010287 plastoglobule(GO:0010287)
0.1 0.3 GO:0000172 ribonuclease MRP complex(GO:0000172) nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 1.3 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 0.5 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 0.6 GO:0048226 Casparian strip(GO:0048226)
0.1 1.3 GO:0005871 kinesin complex(GO:0005871)
0.0 1.3 GO:0005686 U2 snRNP(GO:0005686)
0.0 2.9 GO:0016607 nuclear speck(GO:0016607)
0.0 2.5 GO:0031977 thylakoid lumen(GO:0031977)
0.0 11.4 GO:0048046 apoplast(GO:0048046)
0.0 0.9 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.4 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 1.0 GO:0043596 nuclear replication fork(GO:0043596)
0.0 0.5 GO:0045273 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.0 7.1 GO:0031225 anchored component of membrane(GO:0031225)
0.0 2.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 21.1 GO:0044434 chloroplast part(GO:0044434)
0.0 2.7 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.6 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 0.1 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 1.1 GO:0009505 plant-type cell wall(GO:0009505)
0.0 30.9 GO:0005576 extracellular region(GO:0005576)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 1.1 GO:0005874 microtubule(GO:0005874)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.5 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.8 3.0 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.7 3.7 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.6 3.2 GO:0004333 fumarate hydratase activity(GO:0004333)
0.5 4.8 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.5 2.0 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.5 6.6 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.5 3.2 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.4 4.9 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.4 1.7 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.4 3.3 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.4 9.8 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.3 3.7 GO:0008199 ferric iron binding(GO:0008199)
0.3 1.0 GO:0036310 annealing helicase activity(GO:0036310)
0.3 2.8 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.3 1.5 GO:0003680 AT DNA binding(GO:0003680)
0.3 1.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.2 1.2 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.2 2.2 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.2 1.6 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.2 2.0 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.2 1.3 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.2 1.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.2 4.8 GO:0008810 cellulase activity(GO:0008810)
0.2 1.9 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.2 0.8 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.2 2.0 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.2 4.9 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.2 1.4 GO:0008131 primary amine oxidase activity(GO:0008131)
0.1 1.7 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 1.0 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 2.7 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 2.5 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 1.3 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 4.3 GO:0045735 nutrient reservoir activity(GO:0045735)
0.1 0.6 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.9 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 1.3 GO:2001070 starch binding(GO:2001070)
0.1 0.7 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 2.1 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 0.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 1.2 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.1 1.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.4 GO:0070704 sterol desaturase activity(GO:0070704)
0.1 1.2 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.1 3.9 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.1 4.6 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 7.5 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.5 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.6 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.1 1.5 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 2.1 GO:0005179 hormone activity(GO:0005179)
0.1 0.7 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.6 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 1.9 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.6 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.3 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.0 2.1 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.4 GO:0001653 peptide receptor activity(GO:0001653)
0.0 1.3 GO:0051087 chaperone binding(GO:0051087)
0.0 1.5 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.9 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.8 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 1.3 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 0.3 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.5 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.6 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 1.4 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 8.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.6 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.2 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 1.0 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 1.2 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.3 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 1.1 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.4 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.4 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.6 GO:0032934 sterol binding(GO:0032934)
0.0 0.2 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 1.9 GO:0009055 electron carrier activity(GO:0009055)
0.0 6.2 GO:0020037 heme binding(GO:0020037)
0.0 0.2 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.1 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.4 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 0.6 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 3.0 GO:0003924 GTPase activity(GO:0003924)
0.0 0.1 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0 0.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.7 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.2 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.4 GO:0008171 O-methyltransferase activity(GO:0008171)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.8 PID AP1 PATHWAY AP-1 transcription factor network
0.2 0.5 PID PI3KCI PATHWAY Class I PI3K signaling events
0.1 1.4 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.0 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.7 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 2.4 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 0.5 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production