Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT5G04410

Z-value: 0.83

Transcription factors associated with AT5G04410

Gene Symbol Gene ID Gene Info
AT5G04410
AT5G04410 NAC domain containing protein 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC2arTal_v1_Chr5_+_1243684_1243684-0.571.4e-03Click!

Activity profile of AT5G04410 motif

Sorted Z-values of AT5G04410 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_10255906 2.11 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
Chr1_-_29635931 1.95 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr3_+_5556710 1.80 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_3157501 1.71 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr1_-_6999839 1.69 AT1G20190.1
EXPA11
expansin 11
Chr1_-_4090857 1.66 AT1G12090.1
ELP
extensin-like protein
Chr1_-_6999523 1.57 AT1G20190.2
EXPA11
expansin 11
Chr4_-_7493080 1.56 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr4_-_176870 1.55 AT4G00400.1
GPAT8
glycerol-3-phosphate acyltransferase 8
Chr1_+_10371675 1.54 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_+_18291218 1.53 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
Chr3_-_977474 1.49 AT3G03820.1
SAUR29
SAUR-like auxin-responsive protein family
Chr2_-_15474717 1.49 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr1_-_59215 1.45 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr2_-_11727654 1.44 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
Chr5_-_5966785 1.41 AT5G18020.1
SAUR20
SAUR-like auxin-responsive protein family
Chr1_+_6409655 1.39 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
Chr3_+_18046144 1.38 AT3G48720.1
DCF
HXXXD-type acyl-transferase family protein
Chr1_+_10321011 1.33 AT1G29500.1
AT1G29500
SAUR-like auxin-responsive protein family
Chr4_+_2449434 1.33 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr5_+_4757856 1.28 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr5_+_19825078 1.27 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr5_+_4758921 1.26 AT5G14740.9
CA2
carbonic anhydrase 2
Chr3_+_247192 1.25 AT3G01670.2
AT3G01670.1
SEOa
sieve element occlusion protein
Chr4_-_12772438 1.25 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr1_+_6410947 1.24 AT1G18620.5
TRM3
LONGIFOLIA protein
Chr1_-_26711462 1.22 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
Chr1_+_6410033 1.22 AT1G18620.2
TRM3
LONGIFOLIA protein
Chr3_+_251868 1.22 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
Chr5_-_4171954 1.21 AT5G13140.1
AT5G13140
Pollen Ole e 1 allergen and extensin family protein
Chr5_-_18026077 1.20 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr5_+_5975780 1.18 AT5G18060.1
SAUR23
SAUR-like auxin-responsive protein family
Chr4_-_17606924 1.15 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr1_+_17918207 1.14 AT1G48480.1
RKL1
receptor-like kinase 1
Chr5_+_5968352 1.14 AT5G18030.1
AT5G18030
SAUR-like auxin-responsive protein family
Chr1_-_598657 1.11 AT1G02730.1
CSLD5
cellulose synthase-like D5
Chr5_-_5963405 1.11 AT5G18010.1
SAUR19
SAUR-like auxin-responsive protein family
Chr4_+_17243583 1.09 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr4_+_16810482 1.09 AT4G35350.2
AT4G35350.1
XCP1
xylem cysteine peptidase 1
Chr3_-_19595834 1.09 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr1_-_23487091 1.09 AT1G63310.1
AT1G63310
hypothetical protein
Chr1_+_7252111 1.09 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr3_-_4042075 1.08 AT3G12710.1
AT3G12710
DNA glycosylase superfamily protein
Chr2_+_17854557 1.08 AT2G42900.1
AT2G42900
Plant basic secretory protein (BSP) family protein
Chr3_-_7187521 1.08 AT3G20570.1
ENODL9
early nodulin-like protein 9
Chr1_-_464981 1.06 AT1G02335.1
GL22
germin-like protein subfamily 2 member 2 precursor
Chr2_+_19145218 1.05 AT2G46630.1
AT2G46630
serine/arginine repetitive matrix protein
Chr5_+_17937622 1.04 AT5G44530.3
AT5G44530.2
AT5G44530.1
AT5G44530
Subtilase family protein
Chr3_-_19467455 1.04 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr1_-_25049667 1.02 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr1_-_25049424 1.02 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr1_+_23911024 1.02 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr5_-_6842946 1.02 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr3_+_981072 1.02 AT3G03840.1
SAUR27
SAUR-like auxin-responsive protein family
Chr2_-_12173951 1.02 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr3_+_17228642 1.02 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr4_+_16397995 1.01 AT4G34260.1
FUC95A
1,2-alpha-L-fucosidase
Chr5_+_16468327 1.01 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr3_+_4956349 1.01 AT3G14760.1
AT3G14760
transmembrane protein
Chr1_+_10323636 1.01 AT1G29520.1
AT1G29520
AWPM-19-like family protein
Chr4_-_8307934 1.00 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr5_-_753657 1.00 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr1_-_27340044 0.99 AT1G72610.1
GER1
germin-like protein 1
Chr4_-_7857933 0.99 AT4G13500.1
AT4G13500
transmembrane protein
Chr1_-_10306587 0.99 AT1G29450.2
AT1G29450.1
AT1G29450
SAUR-like auxin-responsive protein family
Chr5_+_22038165 0.98 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
Chr4_+_8931617 0.97 AT4G15680.1
AT4G15680
Thioredoxin superfamily protein
Chr1_+_3031046 0.97 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_12785037 0.97 AT2G29980.2
FAD3
fatty acid desaturase 3
Chr1_+_5058583 0.96 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr2_-_12785190 0.96 AT2G29980.1
FAD3
fatty acid desaturase 3
Chr3_+_983057 0.95 AT3G03850.1
SAUR26
SAUR-like auxin-responsive protein family
Chr4_+_160643 0.95 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_+_12267808 0.95 AT1G33811.1
AT1G33811
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_3664187 0.95 AT1G10960.1
FD1
ferredoxin 1
Chr1_+_4001113 0.95 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
Chr5_-_19899301 0.94 AT5G49100.1
AT5G49100
vitellogenin-like protein
Chr5_-_17581275 0.94 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr1_-_30113489 0.94 AT1G80050.2
APT2
adenine phosphoribosyl transferase 2
Chr5_-_25898171 0.93 AT5G64770.1
RGF9
root meristem growth factor
Chr2_-_11599322 0.92 AT2G27140.1
AT2G27140
HSP20-like chaperones superfamily protein
Chr2_+_17592038 0.92 AT2G42220.1
AT2G42220
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr5_+_22530007 0.92 AT5G55620.1
AT5G55620
hypothetical protein
Chr3_-_8623214 0.92 AT3G23880.1
AT3G23880
F-box and associated interaction domains-containing protein
Chr2_-_18443405 0.92 AT2G44740.1
CYCP4%3B1
cyclin p4;1
Chr1_+_19454798 0.92 AT1G52230.1
PSAH2
photosystem I subunit H2
Chr5_-_671687 0.92 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
Chr5_-_9242854 0.92 AT5G26330.1
AT5G26330
Cupredoxin superfamily protein
Chr2_+_15934244 0.91 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
Chr2_+_19191247 0.90 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr1_-_18405493 0.90 AT1G49730.3
AT1G49730.4
AT1G49730.2
AT1G49730.5
AT1G49730.1
AT1G49730
Protein kinase superfamily protein
Chr1_-_23137254 0.89 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_26538437 0.89 AT1G70410.2
BCA4
beta carbonic anhydrase 4
Chr1_+_1231452 0.89 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
Chr1_+_9259750 0.88 AT1G26770.2
EXPA10
expansin A10
Chr1_-_30114010 0.88 AT1G80050.1
APT2
adenine phosphoribosyl transferase 2
Chr5_+_18945543 0.88 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
Chr1_-_11872926 0.88 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
Chr5_+_3032375 0.88 AT5G09760.1
AT5G09760
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_18286321 0.87 AT2G44230.1
AT2G44230
hypothetical protein (DUF946)
Chr5_+_22808641 0.87 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr4_+_14215473 0.86 AT4G28780.1
AT4G28780
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_10475969 0.86 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
Chr5_+_3032019 0.86 AT5G09760.2
AT5G09760
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_23400715 0.85 AT5G57760.1
AT5G57760
hypothetical protein
Chr4_+_15819489 0.85 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr3_+_6266946 0.85 AT3G18280.2
AT3G18280.1
AT3G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_11128941 0.85 AT4G20760.2
AT4G20760.1
AT4G20760
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_-_15429113 0.85 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
Chr4_-_13398307 0.85 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr3_+_20780175 0.84 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
Chr5_+_6457026 0.84 AT5G19190.1
AT5G19190
hypothetical protein
Chr4_+_15583332 0.84 AT4G32280.1
AT4G32280.2
AT4G32280.3
IAA29
indole-3-acetic acid inducible 29
Chr1_-_26515188 0.84 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr5_-_8916856 0.84 AT5G25610.1
RD22
BURP domain-containing protein
Chr5_+_15742543 0.83 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr1_-_26537422 0.83 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
Chr5_+_24667873 0.83 AT5G61350.1
AT5G61350
Protein kinase superfamily protein
Chr1_-_5858446 0.83 AT1G17140.1
AT1G17140.2
ICR1
interactor of constitutive active rops 1
Chr2_-_13797237 0.83 AT2G32500.2
AT2G32500.1
AT2G32500
Stress responsive alpha-beta barrel domain protein
Chr1_+_9259432 0.83 AT1G26770.1
EXPA10
expansin A10
Chr1_-_21266368 0.83 AT1G56720.2
AT1G56720.4
AT1G56720
Protein kinase superfamily protein
Chr4_+_6327917 0.82 AT4G10150.1
AT4G10150
RING/U-box superfamily protein
Chr3_+_6752422 0.82 AT3G19480.1
AT3G19480
D-3-phosphoglycerate dehydrogenase
Chr1_+_20048434 0.82 AT1G53700.1
WAG1
WAG 1
Chr4_-_11504739 0.82 AT4G21650.1
AT4G21650
Subtilase family protein
Chr3_-_20806333 0.82 AT3G56060.1
AT3G56060
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr2_-_17161293 0.82 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
Chr5_+_24167996 0.81 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
Chr1_-_25833966 0.81 AT1G68780.1
AT1G68780
RNI-like superfamily protein
Chr3_+_8586359 0.81 AT3G23805.1
RALFL24
ralf-like 24
Chr3_-_5469594 0.81 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr1_-_22317070 0.81 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr3_-_219104 0.80 AT3G01550.2
AT3G01550.1
PPT2
phosphoenolpyruvate (pep)/phosphate translocator 2
Chr1_-_11740399 0.80 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
Chr5_+_21170048 0.80 AT5G52100.1
CRR1
Dihydrodipicolinate reductase, bacterial/plant
Chr5_+_24240810 0.79 AT5G60200.1
TMO6
TARGET OF MONOPTEROS 6
Chr4_+_16169048 0.79 AT4G33666.1
AT4G33666
hypothetical protein
Chr2_-_18914739 0.79 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr2_+_12014412 0.79 AT2G28190.1
CSD2
copper/zinc superoxide dismutase 2
Chr2_+_11550705 0.79 AT2G27060.1
AT2G27060.2
AT2G27060.3
AT2G27060
Leucine-rich repeat protein kinase family protein
Chr4_+_8470179 0.78 AT4G14750.2
AT4G14750.3
AT4G14750.1
IQD19
IQ-domain 19
Chr3_-_6882235 0.78 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr1_+_5489145 0.77 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
Chr3_-_9945861 0.77 AT3G26960.1
AT3G26960
Pollen Ole e 1 allergen and extensin family protein
Chr4_+_14192569 0.77 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
Chr2_-_7727404 0.77 AT2G17780.2
AT2G17780.4
AT2G17780.5
AT2G17780.8
AT2G17780.10
AT2G17780.9
AT2G17780.1
AT2G17780.6
AT2G17780.3
AT2G17780.7
MCA2
PLAC8 family protein
Chr4_+_5550404 0.77 AT4G08685.1
SAH7
Pollen Ole e 1 allergen and extensin family protein
Chr1_-_29485389 0.76 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
Chr5_+_463073 0.76 AT5G02260.1
EXPA9
expansin A9
Chr1_-_10308163 0.76 AT1G29460.1
AT1G29460.2
AT1G29460
SAUR-like auxin-responsive protein family
Chr2_-_7954680 0.76 AT2G18300.1
AT2G18300.3
AT2G18300.2
HBI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_-_1643174 0.76 AT3G05640.2
AT3G05640.1
AT3G05640.3
AT3G05640
Protein phosphatase 2C family protein
Chr4_+_493546 0.75 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
Chr5_-_6976036 0.75 AT5G20630.1
GER3
germin 3
Chr3_-_3277930 0.75 AT3G10520.1
HB2
hemoglobin 2
Chr3_-_22984566 0.75 AT3G62070.1
AT3G62070
hypothetical protein
Chr5_-_24955503 0.75 AT5G62140.1
AT5G62140
ATP-dependent Clp protease ATP-binding subunit
Chr5_-_24326827 0.75 AT5G60490.1
FLA12
FASCICLIN-like arabinogalactan-protein 12
Chr5_+_16151772 0.75 AT5G40380.3
AT5G40380.2
CRK42
cysteine-rich RLK (RECEPTOR-like protein kinase) 42
Chr2_+_15445294 0.75 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr4_-_407142 0.75 AT4G00950.1
MEE47
hypothetical protein (DUF688)
Chr3_+_6180621 0.74 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr1_+_5602786 0.74 AT1G16390.1
OCT3
organic cation/carnitine transporter 3
Chr4_+_18126057 0.74 AT4G38850.1
SAUR15
SAUR-like auxin-responsive protein family
Chr5_-_2099055 0.74 AT5G06790.1
AT5G06790
cotton fiber protein
Chr2_+_11856571 0.74 AT2G27820.1
PD1
prephenate dehydratase 1
Chr4_-_9157133 0.74 AT4G16155.1
AT4G16155
dihydrolipoamide dehydrogenase
Chr4_+_13693957 0.73 AT4G27360.1
AT4G27360
Dynein light chain type 1 family protein
Chr2_+_15818082 0.73 AT2G37720.1
TBL15
TRICHOME BIREFRINGENCE-LIKE 15
Chr3_+_8194606 0.73 AT3G23050.1
AT3G23050.3
AT3G23050.2
IAA7
indole-3-acetic acid 7
Chr1_+_18290942 0.73 AT1G49430.1
AT1G49430.2
LACS2
long-chain acyl-CoA synthetase 2
Chr5_+_18894378 0.73 AT5G46570.1
BSK2
BR-signaling kinase 2
Chr4_+_12220641 0.73 AT4G23400.1
PIP1%3B5
plasma membrane intrinsic protein 1;5
Chr4_-_14439723 0.72 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr4_+_8360996 0.72 AT4G14560.1
IAA1
indole-3-acetic acid inducible
Chr1_+_27670626 0.71 AT1G73600.1
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_188321 0.71 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr3_-_22859669 0.71 AT3G61750.2
AT3G61750.1
AT3G61750
Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein
Chr5_-_18371021 0.71 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr1_+_27669152 0.71 AT1G73600.2
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_21265895 0.70 AT1G56720.1
AT1G56720
Protein kinase superfamily protein
Chr1_+_24149208 0.70 AT1G65010.1
AT1G65010
WEB family protein (DUF827)
Chr1_+_6089460 0.70 AT1G17700.1
PRA1.F1
prenylated RAB acceptor 1.F1
Chr1_-_20803449 0.69 AT1G55670.1
PSAG
photosystem I subunit G
Chr5_+_24940203 0.69 AT5G62100.2
AT5G62100.4
AT5G62100.3
AT5G62100.5
AT5G62100.6
AT5G62100.1
BAG2
BCL-2-associated athanogene 2
Chr1_-_21266084 0.69 AT1G56720.3
AT1G56720
Protein kinase superfamily protein
Chr3_+_5676749 0.69 AT3G16660.2
AT3G16660.1
AT3G16660
Pollen Ole e 1 allergen and extensin family protein
Chr1_+_2047634 0.68 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr1_+_2047886 0.68 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr1_-_1169034 0.68 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr5_+_23077120 0.68 AT5G57030.1
LUT2
Lycopene beta/epsilon cyclase protein
Chr1_+_16870221 0.68 AT1G44575.1
NPQ4
Chlorophyll A-B binding family protein
Chr1_-_19101265 0.68 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr1_+_16871696 0.68 AT1G44575.2
NPQ4
Chlorophyll A-B binding family protein
Chr1_+_16871511 0.68 AT1G44575.3
NPQ4
Chlorophyll A-B binding family protein
Chr3_+_10505711 0.68 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
Chr2_-_12173679 0.68 AT2G28470.5
BGAL8
beta-galactosidase 8
Chr5_+_735867 0.68 AT5G03130.1
AT5G03130
hypothetical protein
Chr5_-_21337002 0.67 AT5G52570.2
AT5G52570.1
BETA-OHASE 2
beta-carotene hydroxylase 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G04410

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.1 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.4 3.9 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.4 2.9 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.3 1.0 GO:0042353 fucose biosynthetic process(GO:0042353)
0.3 1.3 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.3 1.0 GO:0071457 cellular response to ozone(GO:0071457)
0.3 1.2 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.3 4.8 GO:0015976 carbon utilization(GO:0015976)
0.3 2.0 GO:0090057 root radial pattern formation(GO:0090057)
0.3 2.3 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.3 1.8 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.2 0.7 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.2 2.2 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.2 1.2 GO:0006106 fumarate metabolic process(GO:0006106)
0.2 2.4 GO:0010088 phloem development(GO:0010088)
0.2 0.5 GO:0090603 sieve element differentiation(GO:0090603)
0.2 3.9 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.2 0.4 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 1.1 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.2 0.6 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.2 0.8 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.2 0.8 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.2 1.0 GO:0042549 photosystem II stabilization(GO:0042549)
0.2 0.8 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.2 0.8 GO:0015669 gas transport(GO:0015669)
0.2 0.6 GO:0035017 cuticle pattern formation(GO:0035017)
0.2 0.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 1.1 GO:0043481 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.2 0.5 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.2 0.7 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.2 1.6 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.2 1.1 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 0.6 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.2 6.2 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.2 2.6 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.2 0.6 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 1.5 GO:1990937 xylan acetylation(GO:1990937)
0.1 0.7 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.1 0.7 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 0.7 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 1.8 GO:0030307 positive regulation of cell growth(GO:0030307)
0.1 1.3 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.1 0.9 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 1.0 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.6 GO:0080003 thalianol metabolic process(GO:0080003)
0.1 0.8 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.7 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.7 GO:0042550 photosystem I stabilization(GO:0042550)
0.1 4.6 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.1 0.8 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 0.4 GO:0071258 cellular response to gravity(GO:0071258)
0.1 0.5 GO:0010480 microsporocyte differentiation(GO:0010480)
0.1 0.8 GO:0048629 trichome patterning(GO:0048629)
0.1 2.6 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.3 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.1 0.5 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 0.6 GO:0019419 sulfate reduction(GO:0019419)
0.1 2.6 GO:0071668 cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.1 1.0 GO:0052192 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 1.2 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.1 0.5 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 4.4 GO:0010025 wax biosynthetic process(GO:0010025)
0.1 1.0 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 0.4 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.1 1.2 GO:0009554 megasporogenesis(GO:0009554)
0.1 1.4 GO:0018904 ether metabolic process(GO:0018904)
0.1 0.3 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.1 0.4 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.1 0.9 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.5 GO:0045922 negative regulation of fatty acid metabolic process(GO:0045922)
0.1 0.5 GO:0010226 response to lithium ion(GO:0010226)
0.1 0.4 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 1.6 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.1 2.9 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 0.6 GO:0000719 photoreactive repair(GO:0000719)
0.1 0.6 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.3 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.1 0.9 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.2 GO:1901529 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.1 0.5 GO:0051320 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.7 GO:0006021 inositol biosynthetic process(GO:0006021)
0.1 0.2 GO:0010254 nectary development(GO:0010254)
0.1 5.1 GO:0007267 cell-cell signaling(GO:0007267)
0.1 0.4 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.1 0.6 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 1.6 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.1 0.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.1 2.0 GO:0045493 xylan catabolic process(GO:0045493)
0.1 0.8 GO:0030104 water homeostasis(GO:0030104)
0.1 0.4 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 7.7 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.1 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 1.3 GO:0030091 protein repair(GO:0030091)
0.1 0.3 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 0.3 GO:0001578 microtubule bundle formation(GO:0001578)
0.1 0.4 GO:0043692 monoterpene metabolic process(GO:0043692)
0.1 0.2 GO:0010110 regulation of photosynthesis, dark reaction(GO:0010110) cellular response to anoxia(GO:0071454) regulation of reductive pentose-phosphate cycle(GO:0080152) negative regulation of reductive pentose-phosphate cycle(GO:0080153)
0.1 0.2 GO:0030638 polyketide metabolic process(GO:0030638)
0.1 0.3 GO:0070509 calcium ion import(GO:0070509)
0.1 0.2 GO:0044036 cell wall macromolecule metabolic process(GO:0044036)
0.1 0.5 GO:0097502 mannosylation(GO:0097502)
0.1 1.1 GO:0000919 cell plate assembly(GO:0000919)
0.1 0.4 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 2.7 GO:0009958 positive gravitropism(GO:0009958)
0.1 0.5 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.1 0.2 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 0.9 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 0.9 GO:0032544 plastid translation(GO:0032544)
0.1 0.2 GO:0010446 response to alkaline pH(GO:0010446)
0.1 0.2 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.1 0.3 GO:0048479 style development(GO:0048479)
0.1 0.2 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 0.1 GO:0051480 regulation of cytosolic calcium ion concentration(GO:0051480)
0.1 0.4 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.1 0.5 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.1 1.2 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.1 4.3 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 0.2 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 2.2 GO:0006284 base-excision repair(GO:0006284)
0.1 0.6 GO:0043410 positive regulation of MAPK cascade(GO:0043410)
0.1 0.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.9 GO:0006898 receptor-mediated endocytosis(GO:0006898)
0.1 0.3 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.1 0.2 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.1 0.5 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 4.6 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.6 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.6 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.3 GO:0046208 spermine catabolic process(GO:0046208)
0.1 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.1 0.4 GO:0048446 petal morphogenesis(GO:0048446)
0.1 0.7 GO:0009641 shade avoidance(GO:0009641)
0.1 0.4 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 1.0 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.4 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 0.2 GO:0031055 chromatin remodeling at centromere(GO:0031055)
0.1 7.7 GO:0015979 photosynthesis(GO:0015979)
0.1 0.3 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 0.4 GO:1904961 quiescent center organization(GO:1904961)
0.1 0.8 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 1.4 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.1 0.2 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.1 0.2 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 1.4 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 1.1 GO:0015740 C4-dicarboxylate transport(GO:0015740)
0.1 0.8 GO:0010274 hydrotropism(GO:0010274)
0.1 0.7 GO:0051761 sesquiterpene metabolic process(GO:0051761) sesquiterpene biosynthetic process(GO:0051762)
0.1 0.3 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.6 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.1 0.3 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 1.6 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.1 0.7 GO:0007143 female meiotic division(GO:0007143)
0.1 0.4 GO:0080190 secondary growth(GO:0080117) lateral growth(GO:0080190)
0.1 0.4 GO:0046085 adenosine metabolic process(GO:0046085)
0.1 0.2 GO:0010045 response to nickel cation(GO:0010045)
0.1 0.2 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.3 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.7 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 0.3 GO:0010453 regulation of cell fate commitment(GO:0010453) regulation of cell fate specification(GO:0042659)
0.1 0.3 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.1 0.4 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.2 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.0 0.5 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.0 GO:0099515 cytoskeleton-dependent intracellular transport(GO:0030705) actin filament-based transport(GO:0099515)
0.0 0.5 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.1 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.1 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.0 0.4 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.1 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.0 0.3 GO:0010731 protein glutathionylation(GO:0010731)
0.0 0.1 GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process(GO:0046901)
0.0 0.3 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.2 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.4 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.2 GO:0006788 heme oxidation(GO:0006788)
0.0 0.9 GO:0010227 floral organ abscission(GO:0010227)
0.0 1.2 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.9 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.3 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.2 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.0 0.3 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.0 0.1 GO:0090143 nucleoid organization(GO:0090143)
0.0 0.5 GO:0045227 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.0 0.9 GO:0009638 phototropism(GO:0009638)
0.0 0.3 GO:0006552 leucine catabolic process(GO:0006552)
0.0 0.1 GO:0042539 hypotonic salinity response(GO:0042539)
0.0 0.2 GO:0006687 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.0 0.1 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.0 0.1 GO:0000494 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.0 2.3 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.0 0.8 GO:0050821 protein stabilization(GO:0050821)
0.0 0.3 GO:0043174 nucleoside salvage(GO:0043174)
0.0 0.4 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 0.5 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.2 GO:0010018 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.0 0.1 GO:0046622 positive regulation of organ growth(GO:0046622) positive regulation of developmental growth(GO:0048639)
0.0 0.4 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.3 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.2 GO:0015846 polyamine transport(GO:0015846)
0.0 0.4 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.2 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.3 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.2 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.0 0.2 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.3 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.4 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.2 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.0 0.3 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 1.1 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.4 GO:0009583 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.0 0.3 GO:0009704 de-etiolation(GO:0009704)
0.0 1.1 GO:0048825 cotyledon development(GO:0048825)
0.0 0.2 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.9 GO:0006935 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.5 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.5 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 1.3 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.6 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.3 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.2 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.5 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.7 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.8 GO:0010218 response to far red light(GO:0010218)
0.0 0.2 GO:0006821 chloride transport(GO:0006821)
0.0 0.2 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.0 0.2 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.0 0.5 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 0.2 GO:0009581 detection of external stimulus(GO:0009581) detection of abiotic stimulus(GO:0009582)
0.0 0.3 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.0 0.2 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.4 GO:0015693 magnesium ion transport(GO:0015693)
0.0 1.2 GO:0009566 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.4 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.3 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.1 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.0 0.4 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.1 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.4 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.0 0.2 GO:0070131 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.0 0.3 GO:0010152 pollen maturation(GO:0010152)
0.0 0.5 GO:0042335 cuticle development(GO:0042335)
0.0 0.2 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.5 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.3 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.0 0.2 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.2 GO:0042372 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
0.0 0.0 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.0 0.1 GO:0090548 response to ammonium ion(GO:0060359) response to nitrate starvation(GO:0090548)
0.0 0.3 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.1 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.3 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.0 0.2 GO:0042219 glutathione catabolic process(GO:0006751) cellular modified amino acid catabolic process(GO:0042219)
0.0 1.1 GO:0010410 hemicellulose metabolic process(GO:0010410)
0.0 0.1 GO:2000757 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.2 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.1 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.1 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.1 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.3 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.3 GO:0009688 abscisic acid biosynthetic process(GO:0009688) apocarotenoid biosynthetic process(GO:0043289) tertiary alcohol biosynthetic process(GO:1902645)
0.0 1.9 GO:0009860 pollen tube growth(GO:0009860)
0.0 0.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 1.0 GO:0006887 exocytosis(GO:0006887)
0.0 0.1 GO:0000710 meiotic mismatch repair(GO:0000710)
0.0 0.4 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 0.2 GO:1902099 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.0 0.5 GO:0071482 cellular response to light stimulus(GO:0071482)
0.0 0.3 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.0 0.9 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 0.1 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.0 0.2 GO:0009405 pathogenesis(GO:0009405)
0.0 1.2 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.6 GO:0006476 protein deacetylation(GO:0006476)
0.0 0.1 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.0 0.8 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.3 GO:0010927 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.1 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 1.5 GO:0018105 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.1 GO:0010231 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.0 0.2 GO:0009306 protein secretion(GO:0009306)
0.0 0.2 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.0 0.7 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.2 GO:0006298 mismatch repair(GO:0006298)
0.0 0.5 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.1 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.1 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.3 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.1 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.0 0.1 GO:0010332 response to gamma radiation(GO:0010332)
0.0 0.4 GO:0010311 lateral root formation(GO:0010311)
0.0 0.4 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 1.4 GO:0009658 chloroplast organization(GO:0009658)
0.0 0.2 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.2 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.5 GO:0022900 electron transport chain(GO:0022900)
0.0 0.2 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.3 GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032434) positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) regulation of proteasomal protein catabolic process(GO:0061136) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.3 GO:0032509 endosome transport via multivesicular body sorting pathway(GO:0032509)
0.0 0.1 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.2 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 5.1 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.4 1.9 GO:0005960 glycine cleavage complex(GO:0005960)
0.3 0.3 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 0.7 GO:0030093 chloroplast photosystem I(GO:0030093)
0.2 1.7 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 0.5 GO:0043673 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.2 0.7 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 0.5 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.2 2.7 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.4 GO:0009522 photosystem I(GO:0009522)
0.1 0.7 GO:0030286 dynein complex(GO:0030286)
0.1 0.7 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 1.5 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 1.8 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.1 7.1 GO:0031977 thylakoid lumen(GO:0031977)
0.1 1.6 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.6 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.8 GO:0010369 chromocenter(GO:0010369)
0.1 4.7 GO:0010287 plastoglobule(GO:0010287)
0.1 0.5 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.4 GO:0070505 extracellular matrix component(GO:0044420) pollen coat(GO:0070505)
0.1 1.5 GO:0016459 myosin complex(GO:0016459)
0.1 0.7 GO:0030139 endocytic vesicle(GO:0030139)
0.1 1.3 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 0.3 GO:0032044 DSIF complex(GO:0032044)
0.1 0.8 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.1 0.6 GO:0035618 root hair(GO:0035618) root hair tip(GO:0035619)
0.1 0.2 GO:0002178 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.1 0.4 GO:0071339 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.1 0.6 GO:0016272 prefoldin complex(GO:0016272)
0.1 0.2 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.5 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 0.2 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.1 0.5 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.1 0.2 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 0.8 GO:0031012 extracellular matrix(GO:0031012)
0.1 15.0 GO:0048046 apoplast(GO:0048046)
0.1 0.2 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.5 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.1 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.0 0.1 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.9 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.3 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.0 1.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.4 GO:0042555 MCM complex(GO:0042555)
0.0 0.4 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 3.3 GO:0005615 extracellular space(GO:0005615)
0.0 0.4 GO:0045298 tubulin complex(GO:0045298)
0.0 0.1 GO:0009501 amyloplast(GO:0009501)
0.0 0.6 GO:0000145 exocyst(GO:0000145)
0.0 8.5 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.2 GO:0032153 cell division site(GO:0032153)
0.0 0.3 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 4.2 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.1 GO:0005905 clathrin-coated pit(GO:0005905)
0.0 0.2 GO:0043073 germ cell nucleus(GO:0043073)
0.0 0.2 GO:0031379 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.3 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.1 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 9.1 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.9 GO:0090406 pollen tube(GO:0090406)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.1 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.0 0.4 GO:0045177 apical part of cell(GO:0045177)
0.0 1.5 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.6 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.3 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.7 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 26.6 GO:0005576 extracellular region(GO:0005576)
0.0 1.1 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0051738 xanthophyll binding(GO:0051738)
0.5 1.8 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.4 4.0 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.4 1.7 GO:0050162 oxalate oxidase activity(GO:0050162)
0.4 1.1 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.3 2.0 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.3 1.0 GO:0004560 alpha-L-fucosidase activity(GO:0004560)
0.3 1.0 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.3 1.0 GO:0010242 oxygen evolving activity(GO:0010242)
0.3 2.4 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.3 1.8 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.3 2.2 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.3 1.9 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.3 0.8 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.3 1.1 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.3 6.0 GO:0016168 chlorophyll binding(GO:0016168)
0.3 0.8 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.3 1.0 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.3 0.8 GO:0005344 oxygen transporter activity(GO:0005344)
0.2 0.7 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 0.5 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.2 1.2 GO:0004333 fumarate hydratase activity(GO:0004333)
0.2 0.7 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.2 0.7 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.2 2.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 0.7 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.2 1.9 GO:0009922 fatty acid elongase activity(GO:0009922)
0.2 2.4 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.2 2.1 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.2 2.0 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 0.7 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.2 1.4 GO:0008083 growth factor activity(GO:0008083)
0.2 1.4 GO:0042299 lupeol synthase activity(GO:0042299)
0.2 0.5 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.2 0.7 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.2 1.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 0.7 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.2 0.7 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.2 0.7 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.2 0.8 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 0.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.2 0.8 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.2 2.1 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.2 0.6 GO:0009973 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.2 4.8 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 0.4 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.7 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.7 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 0.6 GO:0019156 isoamylase activity(GO:0019156)
0.1 2.9 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.9 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 3.1 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 3.5 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 2.5 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 1.2 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.1 0.8 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.4 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.1 0.8 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.9 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.8 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 0.7 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.6 GO:0022842 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 0.5 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.1 1.3 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.1 1.2 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 0.6 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 0.3 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.9 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.5 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.1 0.8 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 1.3 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 2.1 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 2.7 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.5 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 0.6 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 0.6 GO:0003913 DNA photolyase activity(GO:0003913)
0.1 0.4 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.5 GO:0008430 selenium binding(GO:0008430)
0.1 0.3 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 1.1 GO:0016161 beta-amylase activity(GO:0016161)
0.1 1.1 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.6 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.1 0.7 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 0.3 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.1 0.5 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.3 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 1.0 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 1.2 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.3 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.1 1.1 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.2 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 0.5 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.5 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.2 GO:0035671 enone reductase activity(GO:0035671)
0.1 0.3 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.4 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.2 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 1.1 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 4.7 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 0.5 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.1 0.2 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.1 0.3 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.5 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.4 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 0.3 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.2 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
0.1 0.3 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.2 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 4.5 GO:0003777 microtubule motor activity(GO:0003777)
0.1 1.1 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 4.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.7 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 1.7 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.2 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 0.5 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.2 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 0.7 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.2 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 0.3 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 1.5 GO:0008810 cellulase activity(GO:0008810)
0.1 0.4 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.5 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 1.6 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 0.1 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.2 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.1 1.1 GO:0010333 terpene synthase activity(GO:0010333)
0.1 2.1 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.6 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 1.6 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 1.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.9 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.3 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.4 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.0 0.1 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.0 1.6 GO:0005179 hormone activity(GO:0005179)
0.0 0.8 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.4 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 0.3 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.2 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.0 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 1.1 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.0 0.2 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.5 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.0 0.2 GO:0004348 glucosylceramidase activity(GO:0004348)
0.0 0.1 GO:0004156 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.0 0.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.0 0.1 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.0 0.1 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 1.6 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.4 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.2 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.5 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.3 GO:0015037 peptide disulfide oxidoreductase activity(GO:0015037) glutathione disulfide oxidoreductase activity(GO:0015038)
0.0 0.3 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.5 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.2 GO:0019904 protein domain specific binding(GO:0019904)
0.0 0.9 GO:0004568 chitinase activity(GO:0004568)
0.0 0.1 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.0 0.2 GO:0009884 cytokinin receptor activity(GO:0009884)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.4 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 1.2 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.9 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.2 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.2 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.0 0.1 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.0 3.4 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.1 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.0 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.1 GO:0004488 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.0 1.0 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.3 GO:0019158 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.2 GO:0004310 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 0.1 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.4 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.9 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.1 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.0 0.2 GO:0097177 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.2 GO:0004645 phosphorylase activity(GO:0004645)
0.0 0.5 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0052853 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.0 0.3 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.1 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.0 0.1 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.2 GO:0032029 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.2 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.5 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.1 GO:0017022 myosin binding(GO:0017022)
0.0 0.1 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.1 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.9 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.4 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 0.1 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.1 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.0 0.4 GO:0070628 proteasome binding(GO:0070628)
0.0 1.4 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.2 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.2 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 1.0 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.1 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.0 0.4 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.2 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 0.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 1.4 GO:0043621 protein self-association(GO:0043621)
0.0 0.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 1.0 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 6.6 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 0.2 GO:0010011 auxin binding(GO:0010011)
0.0 1.3 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.7 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.2 GO:0004096 catalase activity(GO:0004096)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.1 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.0 0.5 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 0.1 GO:0008061 chitin binding(GO:0008061)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.1 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.0 0.8 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.1 GO:0003909 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.2 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.0 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.0 0.7 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.1 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.0 GO:0005046 KDEL sequence binding(GO:0005046)
0.0 0.1 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.1 GO:0050113 inositol oxygenase activity(GO:0050113)
0.0 0.2 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.1 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.0 0.3 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.3 GO:0031386 protein tag(GO:0031386)
0.0 0.3 GO:0010181 FMN binding(GO:0010181)
0.0 0.1 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.0 0.1 GO:0015505 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.0 0.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.2 GO:0016844 strictosidine synthase activity(GO:0016844)
0.0 0.1 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.1 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 0.1 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 PID IL12 2PATHWAY IL12-mediated signaling events
0.2 0.7 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.1 0.8 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.2 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.2 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.0 0.4 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.3 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.0 0.1 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.0 0.1 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.0 0.1 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.0 0.1 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.0 0.1 PID BARD1 PATHWAY BARD1 signaling events
0.0 0.0 PID PI3KCI PATHWAY Class I PI3K signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.5 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.2 0.7 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.1 0.7 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.1 0.7 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.1 0.3 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.2 REACTOME NUCLEOTIDE BINDING DOMAIN LEUCINE RICH REPEAT CONTAINING RECEPTOR NLR SIGNALING PATHWAYS Genes involved in Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways
0.1 0.2 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.4 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.2 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.0 0.1 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.0 0.6 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.0 0.3 REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX Genes involved in Activation of the pre-replicative complex
0.0 0.1 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.2 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.2 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.0 0.1 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport