Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT5G13790

Z-value: 5.40

Transcription factors associated with AT5G13790

Gene Symbol Gene ID Gene Info
AT5G13790
AT5G13790 AGAMOUS-like 15

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AGL15arTal_v1_Chr5_-_4450864_4450958-0.451.7e-02Click!

Activity profile of AT5G13790 motif

Sorted Z-values of AT5G13790 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_25765718 20.24 AT1G68620.1
AT1G68620
alpha/beta-Hydrolases superfamily protein
Chr2_+_18641563 20.10 AT2G45210.1
SAUR36
SAUR-like auxin-responsive protein family
Chr3_+_5234457 18.86 AT3G15500.1
NAC3
NAC domain containing protein 3
Chr4_+_7156150 18.41 AT4G11910.1
AT4G11910
STAY-GREEN-like protein
Chr4_+_15828228 18.37 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr1_+_10892445 17.87 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
Chr2_+_19375985 17.39 AT2G47190.1
MYB2
myb domain protein 2
Chr1_-_20385380 17.02 AT1G54570.1
PES1
Esterase/lipase/thioesterase family protein
Chr5_-_2176446 16.58 AT5G07010.1
ST2A
sulfotransferase 2A
Chr4_+_6491017 16.36 AT4G10500.1
AT4G10500
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_-_19698482 15.77 AT1G52890.1
NAC019
NAC domain containing protein 19
Chr3_+_9892791 15.63 AT3G26840.1
PES2
Esterase/lipase/thioesterase family protein
Chr3_+_19239305 15.63 AT3G51860.1
AT3G51860.2
CAX3
cation exchanger 3
Chr5_-_4183354 15.46 AT5G13170.1
SAG29
senescence-associated gene 29
Chr4_-_12018492 15.21 AT4G22920.1
NYE1
non-yellowing 1
Chr4_-_12018643 15.15 AT4G22920.2
NYE1
non-yellowing 1
Chr3_+_4603885 15.05 AT3G13950.1
AT3G13950
ankyrin
Chr2_-_19166949 14.78 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
Chr5_+_24958125 14.64 AT5G62150.1
AT5G62150
peptidoglycan-binding LysM domain-containing protein
Chr1_-_21235292 14.51 AT1G56650.1
PAP1
production of anthocyanin pigment 1
Chr2_-_11295918 14.46 AT2G26560.1
PLA2A
phospholipase A 2A
Chr3_-_1055196 14.46 AT3G04060.1
NAC046
NAC domain containing protein 46
Chr5_-_25089603 14.41 AT5G62480.3
AT5G62480.2
AT5G62480.1
GSTU9
glutathione S-transferase tau 9
Chr1_-_1996355 14.36 AT1G06520.1
GPAT1
glycerol-3-phosphate acyltransferase 1
Chr1_+_5389952 14.34 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
Chr4_-_15991536 14.33 AT4G33150.1
AT4G33150.2
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr4_+_13653579 14.24 AT4G27260.1
WES1
Auxin-responsive GH3 family protein
Chr4_-_16344818 14.08 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
Chr3_+_22216540 14.05 AT3G60140.2
AT3G60140.1
DIN2
Glycosyl hydrolase superfamily protein
Chr4_+_13959872 14.01 AT4G28085.1
AT4G28085.2
AT4G28085
transmembrane protein
Chr1_+_26122080 13.94 AT1G69490.1
NAP
NAC-like, activated by AP3/PI
Chr5_+_5995479 13.79 AT5G18130.2
AT5G18130
transmembrane protein
Chr3_+_19089026 13.74 AT3G51440.1
AT3G51440
Calcium-dependent phosphotriesterase superfamily protein
Chr5_+_5995323 13.71 AT5G18130.1
AT5G18130
transmembrane protein
Chr3_+_23289243 13.44 AT3G63010.1
GID1B
alpha/beta-Hydrolases superfamily protein
Chr4_-_17494279 13.36 AT4G37150.1
MES9
methyl esterase 9
Chr4_-_2234689 13.31 AT4G04490.1
CRK36
cysteine-rich RLK (RECEPTOR-like protein kinase) 36
Chr1_+_21652988 13.31 AT1G58340.1
ZF14
MATE efflux family protein
Chr2_-_15419391 13.25 AT2G36780.1
AT2G36780
UDP-Glycosyltransferase superfamily protein
Chr3_-_18375784 13.19 AT3G49580.3
AT3G49580.2
LSU1
response to low sulfur 1
Chr4_-_6718550 13.10 AT4G10960.1
UGE5
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Chr4_+_17579618 13.06 AT4G37390.1
BRU6
Auxin-responsive GH3 family protein
Chr5_+_1672070 12.97 AT5G05600.1
AT5G05600.2
AT5G05600
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_-_16347364 12.82 AT4G34135.1
AT4G34135.2
UGT73B2
UDP-glucosyltransferase 73B2
Chr4_+_15462350 12.80 AT4G31970.1
CYP82C2
cytochrome P450, family 82, subfamily C, polypeptide 2
Chr1_+_23072222 12.80 AT1G62370.1
AT1G62370
RING/U-box superfamily protein
Chr1_-_26338818 12.79 AT1G69930.1
GSTU11
glutathione S-transferase TAU 11
Chr4_-_15988441 12.75 AT4G33150.3
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr1_+_3288087 12.75 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
Chr2_-_19315241 12.64 AT2G47000.7
AT2G47000.1
AT2G47000.2
AT2G47000.4
AT2G47000.3
ABCB4
ATP binding cassette subfamily B4
Chr1_-_9848015 12.53 AT1G28190.1
AT1G28190
hypothetical protein
Chr5_+_2938193 12.50 AT5G09440.1
EXL4
EXORDIUM like 4
Chr3_-_9595283 12.45 AT3G26210.1
CYP71B23
cytochrome P450, family 71, subfamily B, polypeptide 23
Chr1_+_24763941 12.38 AT1G66390.1
MYB90
myb domain protein 90
Chr1_+_1469541 12.33 AT1G05100.1
MAPKKK18
mitogen-activated protein kinase kinase kinase 18
Chr1_+_6100964 12.32 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr4_-_15991202 12.31 AT4G33150.4
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr5_+_4271730 12.29 AT5G13330.1
Rap2.6L
related to AP2 6l
Chr4_-_9393650 12.29 AT4G16690.1
MES16
methyl esterase 16
Chr5_-_2652535 12.29 AT5G08240.1
AT5G08240
transmembrane protein
Chr3_+_995217 12.26 AT3G03870.1
AT3G03870
transmembrane protein
Chr3_+_995062 12.24 AT3G03870.2
AT3G03870
transmembrane protein
Chr4_+_7304323 12.18 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
Chr4_-_15903523 12.16 AT4G32940.1
GAMMA-VPE
gamma vacuolar processing enzyme
Chr4_+_7303985 12.08 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
Chr3_+_9887917 11.99 AT3G26830.1
PAD3
Cytochrome P450 superfamily protein
Chr2_+_18577500 11.97 AT2G45040.1
AT2G45040
Matrixin family protein
Chr5_-_552827 11.95 AT5G02490.1
Hsp70-2
Heat shock protein 70 (Hsp 70) family protein
Chr3_-_18375940 11.95 AT3G49580.1
LSU1
response to low sulfur 1
Chr1_-_5645443 11.91 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr1_+_8164959 11.87 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr3_-_10047453 11.80 AT3G27210.1
AT3G27210
hypothetical protein
Chr4_-_12345652 11.76 AT4G23700.2
CHX17
cation/H+ exchanger 17
Chr2_-_19291632 11.73 AT2G46950.2
AT2G46950.1
CYP709B2
cytochrome P450, family 709, subfamily B, polypeptide 2
Chr1_-_3756998 11.64 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr5_+_21853348 11.55 AT5G53820.1
AT5G53820
Late embryogenesis abundant protein (LEA) family protein
Chr1_+_12917070 11.51 AT1G35230.1
AGP5
arabinogalactan protein 5
Chr3_-_21293158 11.51 AT3G57520.2
AT3G57520.3
AT3G57520.1
SIP2
seed imbibition 2
Chr1_+_2867203 11.51 AT1G08920.1
AT1G08920.2
AT1G08920.3
ESL1
ERD (early response to dehydration) six-like 1
Chr4_+_11655562 11.49 AT4G21980.1
AT4G21980.2
APG8A
Ubiquitin-like superfamily protein
Chr4_-_12346051 11.47 AT4G23700.1
CHX17
cation/H+ exchanger 17
Chr4_+_10818128 11.43 AT4G19970.1
AT4G19970
nucleotide-diphospho-sugar transferase family protein
Chr1_-_17706460 11.43 AT1G48000.1
MYB112
myb domain protein 112
Chr2_-_12905338 11.40 AT2G30250.1
WRKY25
WRKY DNA-binding protein 25
Chr1_-_28991385 11.30 AT1G77145.2
AT1G77145.1
AT1G77145
transmembrane protein, putative (DUF506)
Chr3_+_21380648 11.28 AT3G57680.1
AT3G57680.2
AT3G57680
Peptidase S41 family protein
Chr2_-_275002 11.26 AT2G01610.1
AT2G01610
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_28291698 11.25 AT1G75390.1
AT1G75390.2
bZIP44
basic leucine-zipper 44
Chr2_+_17640546 11.17 AT2G42360.1
AT2G42360
RING/U-box superfamily protein
Chr1_+_8164782 11.12 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr5_+_20764096 11.12 AT5G51070.1
ERD1
Clp ATPase
Chr5_-_1508927 11.07 AT5G05110.1
AT5G05110
Cystatin/monellin family protein
Chr5_-_1580875 11.02 AT5G05340.1
PRX52
Peroxidase superfamily protein
Chr1_-_28318362 10.99 AT1G75450.1
AT1G75450.2
CKX5
cytokinin oxidase 5
Chr3_+_296024 10.89 AT3G01830.2
AT3G01830.1
AT3G01830
Calcium-binding EF-hand family protein
Chr1_-_4740842 10.89 AT1G13830.2
AT1G13830
Carbohydrate-binding X8 domain superfamily protein
Chr2_+_13677986 10.84 AT2G32210.3
AT2G32210.2
AT2G32210.1
AT2G32210
cysteine-rich/transmembrane domain A-like protein
Chr4_-_14820595 10.83 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr5_-_5759817 10.82 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr1_+_28740540 10.71 AT1G76590.1
AT1G76590
PLATZ transcription factor family protein
Chr1_-_2346862 10.69 AT1G07620.3
AT1G07620.2
AT1G07620.1
ATOBGM
GTP-binding protein Obg/CgtA
Chr1_-_6101983 10.67 AT1G17744.1
AT1G17744
hypothetical protein
Chr3_-_350010 10.66 AT3G02040.1
SRG3
senescence-related gene 3
Chr3_-_2651101 10.65 AT3G08720.4
AT3G08720.3
AT3G08720.2
AT3G08720.1
S6K2
serine/threonine protein kinase 2
Chr1_+_8540838 10.55 AT1G24145.1
AT1G24145
transmembrane protein
Chr1_-_5129523 10.51 AT1G14870.2
PCR2
PLANT CADMIUM RESISTANCE 2
Chr3_-_20361560 10.46 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
Chr5_-_4454703 10.43 AT5G13800.4
AT5G13800.3
AT5G13800.1
AT5G13800.2
PPH
pheophytinase
Chr2_+_14031998 10.40 AT2G33080.1
RLP28
receptor like protein 28
Chr4_+_17631500 10.35 AT4G37520.1
AT4G37520.2
AT4G37520
Peroxidase superfamily protein
Chr2_-_15092353 10.30 AT2G35940.3
AT2G35940.1
BLH1
BEL1-like homeodomain 1
Chr1_-_7086873 10.27 AT1G20440.1
COR47
cold-regulated 47
Chr2_-_19315013 10.26 AT2G47000.5
AT2G47000.6
ABCB4
ATP binding cassette subfamily B4
Chr3_+_815550 10.25 AT3G03440.1
AT3G03440
ARM repeat superfamily protein
Chr5_-_18721744 10.24 AT5G46180.1
DELTA-OAT
ornithine-delta-aminotransferase
Chr3_+_18919327 10.20 AT3G50910.1
AT3G50910
netrin receptor DCC
Chr2_-_15092178 10.19 AT2G35940.2
BLH1
BEL1-like homeodomain 1
Chr5_-_8547822 10.19 AT5G24870.2
AT5G24870.1
AT5G24870
RING/U-box superfamily protein
Chr1_+_6508797 10.15 AT1G18860.1
WRKY61
WRKY DNA-binding protein 61
Chr5_-_2081685 10.14 AT5G06730.1
AT5G06730
Peroxidase superfamily protein
Chr1_-_4741189 10.12 AT1G13830.1
AT1G13830
Carbohydrate-binding X8 domain superfamily protein
Chr3_+_6093990 10.12 AT3G17810.1
PYD1
pyrimidine 1
Chr1_-_2282828 10.11 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr4_-_16942060 10.09 AT4G35750.1
AT4G35750
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr1_+_11774484 10.07 AT1G32560.1
AtLEA4-1
Late embryogenesis abundant protein, group 1 protein
Chr5_-_25813620 10.06 AT5G64570.3
AT5G64570.2
AT5G64570.1
XYL4
beta-D-xylosidase 4
Chr4_-_17467109 10.05 AT4G37070.1
AT4G37070.4
AT4G37070.3
AT4G37070.2
PLP1
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Chr3_-_19165322 10.03 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
Chr5_+_4461554 10.03 AT5G13820.2
TBP1
telomeric DNA binding protein 1
Chr1_-_2305031 9.99 AT1G07500.1
AT1G07500
hypothetical protein
Chr5_+_23584789 9.95 AT5G58350.1
WNK4
with no lysine (K) kinase 4
Chr1_-_5129731 9.93 AT1G14870.1
PCR2
PLANT CADMIUM RESISTANCE 2
Chr5_+_206432 9.91 AT5G01520.2
AT5G01520.1
AIRP2
RING/U-box superfamily protein
Chr2_+_19136019 9.90 AT2G46600.1
AT2G46600
Calcium-binding EF-hand family protein
Chr3_+_21381599 9.89 AT3G57680.3
AT3G57680
Peptidase S41 family protein
Chr5_+_2355759 9.86 AT5G07440.2
AT5G07440.1
GDH2
glutamate dehydrogenase 2
Chr5_+_23003909 9.85 AT5G56870.1
BGAL4
beta-galactosidase 4
Chr1_-_29914967 9.82 AT1G79520.1
AT1G79520.4
AT1G79520.3
AT1G79520
Cation efflux family protein
Chr5_-_23452864 9.79 AT5G57910.2
AT5G57910.1
AT5G57910
ribosomal RNA small subunit methyltransferase G
Chr1_+_28655208 9.77 AT1G76390.2
AT1G76390.1
PUB43
ARM repeat superfamily protein
Chr3_-_84901 9.76 AT3G01270.1
AT3G01270
Pectate lyase family protein
Chr3_+_20736508 9.75 AT3G55880.1
AT3G55880.3
AT3G55880.2
AT3G55880.4
SUE4
Alpha/beta hydrolase related protein
Chr1_+_26938369 9.69 AT1G71520.1
AT1G71520
Integrase-type DNA-binding superfamily protein
Chr5_-_8547423 9.63 AT5G24870.3
AT5G24870
RING/U-box superfamily protein
Chr5_+_15883179 9.59 AT5G39670.1
AT5G39670
Calcium-binding EF-hand family protein
Chr5_+_4460840 9.49 AT5G13820.1
TBP1
telomeric DNA binding protein 1
Chr1_+_3945584 9.48 AT1G11700.1
AT1G11700
senescence regulator (Protein of unknown function, DUF584)
Chr1_-_24001593 9.46 AT1G64610.2
AT1G64610
Transducin/WD40 repeat-like superfamily protein
Chr3_+_5243432 9.44 AT3G15510.1
NAC2
NAC domain containing protein 2
Chr5_+_2355962 9.43 AT5G07440.3
GDH2
glutamate dehydrogenase 2
Chr3_+_17692666 9.38 AT3G47950.1
HA4
H[+]-ATPase 4
Chr4_+_13236253 9.27 AT4G26120.2
AT4G26120
Ankyrin repeat family protein / BTB/POZ domain-containing protein
Chr1_+_7493213 9.21 AT1G21400.3
AT1G21400.2
AT1G21400.5
AT1G21400.4
AT1G21400.6
AT1G21400.1
AT1G21400
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
Chr1_-_29914615 9.20 AT1G79520.2
AT1G79520
Cation efflux family protein
Chr3_-_17976774 9.19 AT3G48520.1
CYP94B3
cytochrome P450, family 94, subfamily B, polypeptide 3
Chr5_+_4517694 9.18 AT5G14000.1
AT5G14000.2
AT5G14000.3
NAC084
NAC domain containing protein 84
Chr4_+_13236448 9.18 AT4G26120.1
AT4G26120
Ankyrin repeat family protein / BTB/POZ domain-containing protein
Chr1_+_4915491 9.17 AT1G14370.1
APK2A
protein kinase 2A
Chr3_-_1678968 9.13 AT3G05690.2
AT3G05690.1
NF-YA2
nuclear factor Y, subunit A2
Chr3_+_17692853 9.13 AT3G47950.2
HA4
H[+]-ATPase 4
Chr4_-_17559104 9.12 AT4G37310.1
CYP81H1
cytochrome P450, family 81, subfamily H, polypeptide 1
Chr1_-_24002058 9.09 AT1G64610.1
AT1G64610
Transducin/WD40 repeat-like superfamily protein
Chr5_+_25908247 9.05 AT5G64810.1
WRKY51
WRKY DNA-binding protein 51
Chr1_-_19761496 9.05 AT1G53030.1
AT1G53030
Cytochrome C oxidase copper chaperone (COX17)
Chr5_+_23346876 9.03 AT5G57655.1
AT5G57655
xylose isomerase family protein
Chr1_+_2442570 9.01 AT1G07900.1
LBD1
LOB domain-containing protein 1
Chr5_+_23346675 9.00 AT5G57655.2
AT5G57655
xylose isomerase family protein
Chr1_+_12890404 8.96 AT1G35190.1
AT1G35190.2
AT1G35190
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_+_10826735 8.93 AT2G25440.1
RLP20
receptor like protein 20
Chr3_-_6086203 8.92 AT3G17770.1
AT3G17770
Dihydroxyacetone kinase
Chr4_+_15230008 8.91 AT4G31380.1
FLP1
flowering-promoting factor-like protein
Chr5_-_10213598 8.88 AT5G28237.1
AT5G28237.2
AT5G28237
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr4_-_10714745 8.88 AT4G19700.1
RING
SBP (S-ribonuclease binding protein) family protein
Chr2_-_16068615 8.87 AT2G38340.1
DREB19
Integrase-type DNA-binding superfamily protein
Chr1_+_19199351 8.87 AT1G51760.1
IAR3
peptidase M20/M25/M40 family protein
Chr1_-_1257893 8.85 AT1G04580.1
AO4
aldehyde oxidase 4
Chr1_-_10014256 8.84 AT1G28480.1
GRX480
Thioredoxin superfamily protein
Chr1_-_26058105 8.84 AT1G69310.4
AT1G69310.3
WRKY57
WRKY DNA-binding protein 57
Chr1_+_21207537 8.83 AT1G56600.1
GolS2
galactinol synthase 2
Chr5_+_25322975 8.82 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr2_-_14051400 8.79 AT2G33150.1
PKT3
peroxisomal 3-ketoacyl-CoA thiolase 3
Chr2_-_16368570 8.75 AT2G39210.1
AT2G39210
Major facilitator superfamily protein
Chr5_-_2529421 8.75 AT5G07920.1
AT5G07920.3
AT5G07920.2
DGK1
diacylglycerol kinase1
Chr5_+_9480702 8.74 AT5G26940.3
AT5G26940.1
AT5G26940.2
DPD1
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr4_+_15383633 8.73 AT4G31800.2
WRKY18
WRKY DNA-binding protein 18
Chr1_-_21468505 8.72 AT1G58030.1
CAT2
cationic amino acid transporter 2
Chr1_-_19993334 8.66 AT1G53580.2
AT1G53580.1
GLY3
glyoxalase II 3
Chr1_+_5090809 8.63 AT1G14780.1
AT1G14780
MAC/Perforin domain-containing protein
Chr5_+_1551298 8.61 AT5G05230.1
AT5G05230
RING/U-box superfamily protein
Chr1_+_5171181 8.61 AT1G15010.1
AT1G15010
mediator of RNA polymerase II transcription subunit
Chr1_-_167842 8.58 AT1G01453.2
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr1_-_8537780 8.55 AT1G24140.1
AT1G24140
Matrixin family protein
Chr5_+_21534473 8.55 AT5G53120.6
AT5G53120.1
AT5G53120.2
SPDS3
spermidine synthase 3
Chr3_-_3386533 8.54 AT3G10815.1
AT3G10815
RING/U-box superfamily protein
Chr1_-_17817406 8.53 AT1G48260.1
AT1G48260.2
AT1G48260.5
AT1G48260.4
CIPK17
CBL-interacting protein kinase 17
Chr5_+_6212773 8.52 AT5G18640.2
AT5G18640.1
AT5G18640.3
AT5G18640.4
AT5G18640.5
AT5G18640
alpha/beta-Hydrolases superfamily protein
Chr4_+_15383197 8.51 AT4G31800.3
WRKY18
WRKY DNA-binding protein 18
Chr3_-_22915393 8.48 AT3G61890.1
HB-12
homeobox 12
Chr3_-_9313599 8.46 AT3G25610.1
AT3G25610
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr3_-_6676520 8.45 AT3G19270.1
AT3G19270.2
CYP707A4
cytochrome P450, family 707, subfamily A, polypeptide 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G13790

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
8.2 32.6 GO:0033306 phytol metabolic process(GO:0033306)
7.6 30.3 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
6.1 18.4 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
5.7 90.9 GO:1900057 positive regulation of leaf senescence(GO:1900057)
5.3 26.3 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
4.9 34.2 GO:0006597 spermine biosynthetic process(GO:0006597)
4.6 22.9 GO:0060919 auxin influx(GO:0060919)
4.4 31.0 GO:0010438 cellular response to sulfur starvation(GO:0010438)
4.3 8.7 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
4.3 17.3 GO:0006527 arginine catabolic process(GO:0006527)
4.2 12.7 GO:0032491 detection of molecule of fungal origin(GO:0032491)
4.2 8.5 GO:0008300 isoprenoid catabolic process(GO:0008300)
4.1 12.2 GO:1902347 response to strigolactone(GO:1902347)
4.0 16.1 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
4.0 12.0 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
3.9 15.6 GO:0010351 lithium ion transport(GO:0010351)
3.9 19.4 GO:0072708 response to sorbitol(GO:0072708)
3.9 27.2 GO:0009745 sucrose mediated signaling(GO:0009745)
3.8 11.5 GO:0033530 raffinose metabolic process(GO:0033530)
3.7 11.1 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
3.6 18.0 GO:0019323 pentose catabolic process(GO:0019323)
3.5 10.6 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
3.5 10.4 GO:0010124 phenylacetate catabolic process(GO:0010124)
3.4 10.1 GO:0006212 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
3.3 20.1 GO:0006624 vacuolar protein processing(GO:0006624)
3.2 9.7 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
3.1 9.4 GO:0009945 radial axis specification(GO:0009945)
3.1 6.2 GO:0035865 cellular response to potassium ion(GO:0035865)
2.9 8.6 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
2.7 10.9 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
2.7 8.1 GO:0090213 regulation of radial pattern formation(GO:0090213)
2.7 8.1 GO:0016540 protein autoprocessing(GO:0016540)
2.7 37.8 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
2.7 10.7 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) glycerophospholipid catabolic process(GO:0046475) cellular trivalent inorganic anion homeostasis(GO:0072502)
2.7 13.3 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
2.6 23.7 GO:0050691 regulation of defense response to virus by host(GO:0050691)
2.6 41.5 GO:0015996 chlorophyll catabolic process(GO:0015996)
2.6 7.8 GO:0035606 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
2.6 7.7 GO:0042908 xenobiotic transport(GO:0042908)
2.6 12.8 GO:0006564 L-serine biosynthetic process(GO:0006564)
2.5 7.6 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
2.5 7.5 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
2.5 14.9 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
2.4 7.2 GO:1901379 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
2.4 7.2 GO:0046521 sphingoid catabolic process(GO:0046521)
2.4 11.8 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
2.4 28.3 GO:0010555 response to mannitol(GO:0010555)
2.3 14.0 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
2.3 9.2 GO:0048480 stigma development(GO:0048480)
2.3 6.8 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
2.2 17.9 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
2.2 6.7 GO:0019320 hexose catabolic process(GO:0019320)
2.2 8.8 GO:0046373 L-arabinose metabolic process(GO:0046373)
2.2 13.0 GO:0070212 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
2.2 6.5 GO:0009107 lipoate biosynthetic process(GO:0009107)
2.1 2.1 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
2.1 14.8 GO:0019405 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
2.1 6.2 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
2.0 8.2 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
2.0 6.1 GO:0002188 translation reinitiation(GO:0002188)
1.9 5.7 GO:0010269 response to selenium ion(GO:0010269)
1.9 22.7 GO:0015749 monosaccharide transport(GO:0015749)
1.9 22.7 GO:0048317 seed morphogenesis(GO:0048317)
1.8 7.4 GO:0000256 allantoin catabolic process(GO:0000256)
1.8 11.0 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
1.8 16.3 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
1.8 5.4 GO:0010045 response to nickel cation(GO:0010045)
1.8 5.4 GO:0018065 protein-cofactor linkage(GO:0018065)
1.8 5.3 GO:0032196 transposition(GO:0032196)
1.8 10.5 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
1.7 1.7 GO:0042178 xenobiotic catabolic process(GO:0042178)
1.7 8.6 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
1.7 12.0 GO:0009268 response to pH(GO:0009268)
1.6 6.6 GO:0055073 cadmium ion homeostasis(GO:0055073)
1.6 4.8 GO:0043171 peptide catabolic process(GO:0043171)
1.6 8.0 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
1.6 4.8 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
1.6 4.8 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
1.6 12.6 GO:0010508 positive regulation of autophagy(GO:0010508)
1.6 4.7 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
1.6 6.3 GO:0043092 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938) L-alpha-amino acid transmembrane transport(GO:1902475)
1.6 4.7 GO:0048281 inflorescence morphogenesis(GO:0048281)
1.5 12.1 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
1.5 4.5 GO:0017145 stem cell division(GO:0017145)
1.5 16.5 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
1.5 10.5 GO:0060866 leaf abscission(GO:0060866)
1.5 14.9 GO:0006308 DNA catabolic process(GO:0006308)
1.5 11.9 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
1.5 5.9 GO:0019433 triglyceride catabolic process(GO:0019433)
1.5 45.6 GO:0006012 galactose metabolic process(GO:0006012)
1.5 4.4 GO:0009663 plasmodesma organization(GO:0009663)
1.4 27.5 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
1.4 4.3 GO:0046203 spermidine catabolic process(GO:0046203)
1.4 57.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
1.4 8.6 GO:0048863 stem cell differentiation(GO:0048863)
1.4 8.6 GO:0003400 regulation of COPII vesicle coating(GO:0003400) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
1.4 2.8 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
1.4 4.2 GO:0071485 cellular response to absence of light(GO:0071485)
1.4 5.5 GO:0051865 protein autoubiquitination(GO:0051865)
1.4 6.8 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
1.4 2.7 GO:0015807 L-amino acid transport(GO:0015807)
1.4 6.8 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
1.4 5.4 GO:0080168 abscisic acid transport(GO:0080168)
1.3 4.0 GO:0010219 regulation of vernalization response(GO:0010219)
1.3 10.6 GO:0009410 response to xenobiotic stimulus(GO:0009410)
1.3 5.2 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
1.3 23.5 GO:0019374 galactolipid metabolic process(GO:0019374)
1.3 2.6 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
1.3 2.6 GO:1902583 multi-organism intracellular transport(GO:1902583)
1.3 16.6 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
1.3 7.6 GO:0043617 cellular response to sucrose starvation(GO:0043617)
1.3 6.3 GO:0071277 cellular response to calcium ion(GO:0071277)
1.3 5.0 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
1.2 23.6 GO:0006826 iron ion transport(GO:0006826)
1.2 6.1 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
1.2 3.6 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
1.2 3.6 GO:0009727 detection of ethylene stimulus(GO:0009727)
1.2 6.1 GO:0048587 regulation of short-day photoperiodism, flowering(GO:0048587)
1.2 3.6 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
1.2 21.7 GO:0009065 glutamine family amino acid catabolic process(GO:0009065)
1.2 8.4 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
1.2 8.4 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
1.2 13.1 GO:0006825 copper ion transport(GO:0006825)
1.2 4.7 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
1.2 11.9 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
1.2 8.2 GO:0009099 valine biosynthetic process(GO:0009099)
1.2 10.5 GO:0051410 detoxification of nitrogen compound(GO:0051410)
1.2 6.9 GO:0045739 positive regulation of DNA repair(GO:0045739)
1.1 3.4 GO:0050688 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
1.1 4.5 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
1.1 11.3 GO:0010262 somatic embryogenesis(GO:0010262)
1.1 8.8 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
1.1 5.5 GO:0006878 cellular copper ion homeostasis(GO:0006878)
1.1 7.7 GO:0048363 mucilage pectin metabolic process(GO:0048363)
1.1 26.6 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
1.0 6.2 GO:1900458 negative regulation of brassinosteroid mediated signaling pathway(GO:1900458)
1.0 15.5 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
1.0 6.2 GO:0070199 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
1.0 4.1 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
1.0 4.1 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
1.0 3.0 GO:0051604 protein maturation(GO:0051604)
1.0 3.0 GO:0034308 primary alcohol metabolic process(GO:0034308)
1.0 13.2 GO:0031053 primary miRNA processing(GO:0031053)
1.0 12.1 GO:0044804 nucleophagy(GO:0044804)
1.0 8.0 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
1.0 12.1 GO:1902074 response to salt(GO:1902074)
1.0 7.9 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.9 2.8 GO:0006750 glutathione biosynthetic process(GO:0006750) nonribosomal peptide biosynthetic process(GO:0019184)
0.9 4.7 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.9 2.8 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.9 2.8 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.9 35.9 GO:0034620 cellular response to unfolded protein(GO:0034620)
0.9 9.1 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.9 5.5 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.9 14.5 GO:0015770 sucrose transport(GO:0015770)
0.9 2.7 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.9 2.7 GO:0010353 response to trehalose(GO:0010353)
0.9 3.6 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.9 21.4 GO:0031348 negative regulation of defense response(GO:0031348)
0.9 1.8 GO:0002082 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.9 7.0 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.9 46.3 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.9 16.6 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.9 2.6 GO:0000494 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.9 7.7 GO:0042357 thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357)
0.8 9.3 GO:0045116 protein neddylation(GO:0045116)
0.8 17.6 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.8 32.4 GO:0006749 glutathione metabolic process(GO:0006749)
0.8 29.8 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.8 4.9 GO:0002683 negative regulation of immune system process(GO:0002683) negative regulation of immune response(GO:0050777)
0.8 5.7 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.8 13.0 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.8 5.6 GO:0051014 actin filament severing(GO:0051014)
0.8 3.2 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.8 4.8 GO:0048530 fruit morphogenesis(GO:0048530)
0.8 1.6 GO:0033120 positive regulation of RNA splicing(GO:0033120)
0.8 14.1 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.8 3.9 GO:0048446 petal morphogenesis(GO:0048446)
0.8 10.9 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.8 6.2 GO:1900618 regulation of shoot system morphogenesis(GO:1900618)
0.8 4.6 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.8 7.0 GO:0010230 alternative respiration(GO:0010230)
0.8 2.3 GO:0010507 negative regulation of autophagy(GO:0010507)
0.8 11.5 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.8 3.8 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.8 3.8 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.8 13.5 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.8 2.3 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.7 14.2 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.7 3.0 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.7 149.4 GO:0071456 cellular response to hypoxia(GO:0071456)
0.7 3.6 GO:0090421 embryonic meristem initiation(GO:0090421)
0.7 4.3 GO:0006567 threonine catabolic process(GO:0006567)
0.7 3.6 GO:0046622 positive regulation of organ growth(GO:0046622)
0.7 7.2 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.7 5.0 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.7 2.8 GO:1990428 miRNA transport(GO:1990428)
0.7 6.3 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.7 13.7 GO:0009395 phospholipid catabolic process(GO:0009395)
0.7 6.2 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.7 2.0 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.7 3.4 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.7 11.5 GO:0006914 autophagy(GO:0006914)
0.7 3.4 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.7 18.1 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.7 8.0 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.7 2.6 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.7 2.6 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.7 6.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.7 2.0 GO:0072388 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.7 2.6 GO:0080093 regulation of photorespiration(GO:0080093)
0.6 4.5 GO:0090548 response to nitrate starvation(GO:0090548)
0.6 22.4 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.6 1.9 GO:0030656 regulation of vitamin metabolic process(GO:0030656) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.6 4.4 GO:0055070 copper ion homeostasis(GO:0055070)
0.6 1.3 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.6 4.9 GO:0006379 mRNA cleavage(GO:0006379)
0.6 25.6 GO:0010286 heat acclimation(GO:0010286)
0.6 1.2 GO:0015744 succinate transport(GO:0015744)
0.6 2.4 GO:1902408 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.6 9.1 GO:0043248 proteasome assembly(GO:0043248)
0.6 2.4 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.6 13.8 GO:0050826 response to freezing(GO:0050826)
0.6 3.0 GO:0051601 exocyst localization(GO:0051601)
0.6 3.5 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.6 2.3 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.6 4.1 GO:0015691 cadmium ion transport(GO:0015691)
0.6 1.7 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.6 37.0 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.6 1.1 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.6 2.3 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.6 9.6 GO:0090333 regulation of stomatal closure(GO:0090333)
0.6 2.2 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.6 3.9 GO:0007584 response to nutrient(GO:0007584)
0.6 63.8 GO:0007568 aging(GO:0007568)
0.6 3.9 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.5 22.5 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.5 4.4 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.5 4.9 GO:0006491 N-glycan processing(GO:0006491)
0.5 3.2 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.5 11.8 GO:0009269 response to desiccation(GO:0009269)
0.5 5.9 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.5 2.1 GO:0009118 regulation of nucleoside metabolic process(GO:0009118) regulation of coenzyme metabolic process(GO:0051196)
0.5 2.1 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.5 6.8 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.5 5.2 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.5 6.8 GO:0005987 sucrose catabolic process(GO:0005987)
0.5 3.6 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.5 17.1 GO:0002239 response to oomycetes(GO:0002239)
0.5 6.2 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.5 1.0 GO:0060964 regulation of gene silencing by miRNA(GO:0060964)
0.5 7.7 GO:0030010 establishment of cell polarity(GO:0030010)
0.5 9.2 GO:0007602 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.5 5.6 GO:0071331 cellular response to monosaccharide stimulus(GO:0071326) cellular response to hexose stimulus(GO:0071331) cellular response to glucose stimulus(GO:0071333)
0.5 5.1 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.5 4.0 GO:0044375 regulation of peroxisome size(GO:0044375)
0.5 5.5 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.5 23.0 GO:0034605 cellular response to heat(GO:0034605)
0.5 4.4 GO:0000478 endonucleolytic cleavage involved in rRNA processing(GO:0000478)
0.5 2.9 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.5 3.4 GO:0010155 regulation of proton transport(GO:0010155)
0.5 2.9 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.5 8.7 GO:0046688 response to copper ion(GO:0046688)
0.5 14.4 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.5 1.9 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.5 0.9 GO:0019400 glycerol metabolic process(GO:0006071) alditol metabolic process(GO:0019400)
0.5 10.7 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.5 2.3 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.4 2.2 GO:0010390 histone monoubiquitination(GO:0010390)
0.4 2.7 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.4 12.7 GO:0071804 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.4 5.2 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.4 3.4 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.4 6.0 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.4 2.5 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.4 3.4 GO:0005513 detection of calcium ion(GO:0005513)
0.4 1.7 GO:0035494 SNARE complex disassembly(GO:0035494)
0.4 1.7 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.4 5.3 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.4 4.9 GO:0015693 magnesium ion transport(GO:0015693)
0.4 15.4 GO:1901420 negative regulation of response to alcohol(GO:1901420)
0.4 13.8 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.4 1.6 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.4 3.5 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.4 1.6 GO:0030259 lipid glycosylation(GO:0030259)
0.4 4.7 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.4 1.9 GO:1990641 response to iron ion starvation(GO:1990641)
0.4 14.5 GO:0000723 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.4 2.3 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.4 5.3 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.4 1.9 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.4 1.9 GO:0019419 sulfate reduction(GO:0019419)
0.4 13.5 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.4 4.5 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.4 4.9 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.4 1.9 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.4 3.3 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.4 7.0 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.4 8.5 GO:0007030 Golgi organization(GO:0007030)
0.4 1.4 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.4 5.1 GO:0010440 stomatal lineage progression(GO:0010440)
0.4 2.5 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.4 6.7 GO:0051260 protein homooligomerization(GO:0051260)
0.3 19.2 GO:0048767 root hair elongation(GO:0048767)
0.3 4.5 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.3 3.5 GO:0010048 vernalization response(GO:0010048)
0.3 8.3 GO:0032786 positive regulation of DNA-templated transcription, elongation(GO:0032786)
0.3 31.3 GO:0000209 protein polyubiquitination(GO:0000209)
0.3 4.1 GO:0009901 anther dehiscence(GO:0009901)
0.3 12.0 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.3 23.9 GO:0009738 abscisic acid-activated signaling pathway(GO:0009738)
0.3 0.7 GO:0009061 anaerobic respiration(GO:0009061)
0.3 1.3 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.3 9.2 GO:0010043 response to zinc ion(GO:0010043)
0.3 8.1 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.3 3.2 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.3 2.5 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.3 2.2 GO:0016584 nucleosome positioning(GO:0016584)
0.3 1.2 GO:0046048 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.3 3.0 GO:0010193 response to ozone(GO:0010193)
0.3 0.9 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.3 7.9 GO:0072329 monocarboxylic acid catabolic process(GO:0072329)
0.3 2.3 GO:0016575 histone deacetylation(GO:0016575)
0.3 1.7 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.3 3.1 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.3 1.4 GO:0010044 response to aluminum ion(GO:0010044)
0.3 13.8 GO:0006338 chromatin remodeling(GO:0006338)
0.3 2.7 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.3 5.3 GO:0042594 response to starvation(GO:0042594)
0.3 1.0 GO:0046352 oligosaccharide catabolic process(GO:0009313) disaccharide catabolic process(GO:0046352)
0.3 1.8 GO:0016925 protein sumoylation(GO:0016925)
0.3 1.5 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.2 3.5 GO:0007031 peroxisome organization(GO:0007031)
0.2 2.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.2 6.0 GO:0051170 nuclear import(GO:0051170)
0.2 3.8 GO:0034030 coenzyme A biosynthetic process(GO:0015937) nucleoside bisphosphate biosynthetic process(GO:0033866) ribonucleoside bisphosphate biosynthetic process(GO:0034030) purine nucleoside bisphosphate biosynthetic process(GO:0034033)
0.2 3.3 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.2 2.8 GO:0006573 valine metabolic process(GO:0006573) valine catabolic process(GO:0006574)
0.2 0.7 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.2 1.2 GO:0009306 protein secretion(GO:0009306)
0.2 4.6 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.2 6.6 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.2 1.8 GO:0042182 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.2 13.0 GO:0050684 regulation of mRNA processing(GO:0050684) regulation of mRNA metabolic process(GO:1903311)
0.2 2.6 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.2 3.4 GO:1900674 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.2 5.9 GO:0030048 actin filament-based movement(GO:0030048)
0.2 58.4 GO:0016192 vesicle-mediated transport(GO:0016192)
0.2 0.6 GO:0097298 regulation of nucleus size(GO:0097298)
0.2 1.0 GO:0015868 ADP transport(GO:0015866) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) AMP transport(GO:0080121)
0.2 12.6 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.2 4.2 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.2 2.4 GO:0006108 malate metabolic process(GO:0006108)
0.2 3.6 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.2 2.1 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231) flavin-containing compound biosynthetic process(GO:0042727)
0.2 4.6 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.2 5.5 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.2 1.2 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.2 9.3 GO:0006818 hydrogen transport(GO:0006818) proton transport(GO:0015992)
0.2 1.4 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380)
0.2 1.0 GO:0030307 positive regulation of cell growth(GO:0030307)
0.2 1.7 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.2 1.3 GO:0043967 histone H4 acetylation(GO:0043967)
0.2 3.9 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.2 2.0 GO:0031647 regulation of protein stability(GO:0031647)
0.2 2.8 GO:0030042 actin filament depolymerization(GO:0030042)
0.2 8.3 GO:0009615 response to virus(GO:0009615)
0.2 0.3 GO:0010433 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.2 16.7 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.1 0.3 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.1 2.1 GO:0006465 signal peptide processing(GO:0006465)
0.1 12.4 GO:0010200 response to chitin(GO:0010200)
0.1 1.6 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 4.9 GO:0090305 nucleic acid phosphodiester bond hydrolysis(GO:0090305)
0.1 4.6 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.1 2.7 GO:0009910 negative regulation of flower development(GO:0009910)
0.1 6.7 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.1 2.6 GO:0002097 tRNA wobble base modification(GO:0002097)
0.1 5.3 GO:0009631 cold acclimation(GO:0009631)
0.1 3.1 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.1 1.2 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.1 0.8 GO:0048586 negative regulation of long-day photoperiodism, flowering(GO:0048579) regulation of long-day photoperiodism, flowering(GO:0048586)
0.1 0.6 GO:0019079 viral life cycle(GO:0019058) viral genome replication(GO:0019079)
0.1 0.2 GO:0019695 choline metabolic process(GO:0019695)
0.1 2.3 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 1.6 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 14.2 GO:0006470 protein dephosphorylation(GO:0006470)
0.1 0.1 GO:0006883 cellular sodium ion homeostasis(GO:0006883)
0.1 3.0 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.1 2.4 GO:0034250 positive regulation of cellular amide metabolic process(GO:0034250) positive regulation of translation(GO:0045727)
0.1 0.9 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.8 GO:0044818 negative regulation of G2/M transition of mitotic cell cycle(GO:0010972) mitotic DNA replication checkpoint(GO:0033314) mitotic G2/M transition checkpoint(GO:0044818) negative regulation of cell cycle G2/M phase transition(GO:1902750)
0.1 3.6 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.1 0.4 GO:0006687 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 3.0 GO:0010311 lateral root formation(GO:0010311)
0.1 22.8 GO:0016567 protein ubiquitination(GO:0016567)
0.1 17.2 GO:0006979 response to oxidative stress(GO:0006979)
0.1 20.0 GO:0051603 proteolysis involved in cellular protein catabolic process(GO:0051603)
0.1 3.6 GO:0009808 lignin metabolic process(GO:0009808)
0.1 1.4 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 0.8 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 1.2 GO:0010091 trichome branching(GO:0010091)
0.1 12.8 GO:0006508 proteolysis(GO:0006508)
0.1 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 1.4 GO:0019674 NAD metabolic process(GO:0019674)
0.1 2.0 GO:0009846 pollen germination(GO:0009846)
0.1 0.9 GO:0046417 chorismate metabolic process(GO:0046417)
0.1 2.1 GO:0009690 cytokinin metabolic process(GO:0009690)
0.1 1.3 GO:0009251 glucan catabolic process(GO:0009251)
0.1 0.8 GO:0009299 mRNA transcription(GO:0009299)
0.1 8.7 GO:0006397 mRNA processing(GO:0006397)
0.1 0.7 GO:0071900 regulation of protein serine/threonine kinase activity(GO:0071900)
0.1 1.1 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 1.1 GO:0009627 systemic acquired resistance(GO:0009627)
0.0 4.0 GO:0009611 response to wounding(GO:0009611)
0.0 0.5 GO:0051028 mRNA export from nucleus(GO:0006406) mRNA transport(GO:0051028) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.0 0.3 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.5 GO:0016042 lipid catabolic process(GO:0016042)
0.0 0.9 GO:0031347 regulation of defense response(GO:0031347)
0.0 2.7 GO:0040029 regulation of gene expression, epigenetic(GO:0040029)
0.0 0.6 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.5 GO:0060548 negative regulation of cell death(GO:0060548)
0.0 0.2 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.1 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.1 GO:0006282 regulation of DNA repair(GO:0006282)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
3.8 11.5 GO:0005775 vacuolar lumen(GO:0005775)
3.5 21.2 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
3.1 9.4 GO:0005674 transcription factor TFIIF complex(GO:0005674)
3.1 58.8 GO:0016602 CCAAT-binding factor complex(GO:0016602)
2.5 14.9 GO:0030062 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
2.2 6.6 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
2.0 22.4 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
2.0 5.9 GO:0009514 glyoxysome(GO:0009514)
1.8 12.8 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
1.8 12.8 GO:0016363 nuclear matrix(GO:0016363)
1.6 6.3 GO:0043625 delta DNA polymerase complex(GO:0043625)
1.5 7.6 GO:0035861 site of double-strand break(GO:0035861)
1.5 13.3 GO:0017119 Golgi transport complex(GO:0017119)
1.5 5.8 GO:0031356 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
1.4 11.2 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
1.4 8.3 GO:0017053 transcriptional repressor complex(GO:0017053)
1.2 3.6 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
1.2 6.0 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
1.1 9.9 GO:0010445 nuclear dicing body(GO:0010445)
1.0 3.1 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
1.0 10.7 GO:0030904 retromer complex(GO:0030904)
1.0 7.6 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.9 38.8 GO:0009504 cell plate(GO:0009504)
0.9 3.6 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.9 3.5 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.8 8.8 GO:0043189 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.8 19.5 GO:0000781 chromosome, telomeric region(GO:0000781)
0.8 4.5 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.7 5.2 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.7 2.8 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.7 3.5 GO:0034657 GID complex(GO:0034657)
0.7 34.8 GO:0005770 late endosome(GO:0005770)
0.7 8.9 GO:0030131 clathrin adaptor complex(GO:0030131)
0.7 10.5 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.6 5.8 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.6 14.4 GO:0035097 histone methyltransferase complex(GO:0035097)
0.6 2.4 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.6 15.4 GO:0044463 cell projection part(GO:0044463)
0.6 7.9 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.6 17.0 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.6 3.3 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.6 3.3 GO:0000796 condensin complex(GO:0000796)
0.5 5.4 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.5 8.5 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.5 2.6 GO:0005677 chromatin silencing complex(GO:0005677)
0.5 12.9 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.5 8.0 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.5 6.9 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.5 1.5 GO:0032301 MutSalpha complex(GO:0032301)
0.5 6.6 GO:0005769 early endosome(GO:0005769)
0.5 3.8 GO:0030127 COPII vesicle coat(GO:0030127)
0.5 2.3 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.5 8.9 GO:0031970 organelle envelope lumen(GO:0031970)
0.5 1.4 GO:0031897 Tic complex(GO:0031897)
0.5 3.7 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.5 2.7 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.4 13.0 GO:0000139 Golgi membrane(GO:0000139)
0.4 11.0 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.4 3.3 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.4 28.3 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.4 1.6 GO:0001673 male germ cell nucleus(GO:0001673)
0.4 2.0 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.4 2.0 GO:0030141 secretory granule(GO:0030141)
0.4 6.1 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.4 34.0 GO:0016604 nuclear body(GO:0016604)
0.4 4.4 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.4 3.1 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.4 129.7 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.4 17.9 GO:0010008 endosome membrane(GO:0010008)
0.4 8.1 GO:0031012 extracellular matrix(GO:0031012)
0.4 3.3 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.4 1.8 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.4 0.7 GO:0070993 translation preinitiation complex(GO:0070993)
0.4 1.4 GO:0043614 multi-eIF complex(GO:0043614)
0.3 15.4 GO:0016592 mediator complex(GO:0016592)
0.3 1.4 GO:0005640 nuclear outer membrane(GO:0005640)
0.3 2.4 GO:0030014 CCR4-NOT complex(GO:0030014)
0.3 2.0 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.3 1.0 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.3 3.6 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.3 2.3 GO:0031298 replication fork protection complex(GO:0031298)
0.3 2.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.3 2.6 GO:0005884 actin filament(GO:0005884)
0.3 29.4 GO:0005887 integral component of plasma membrane(GO:0005887)
0.3 37.8 GO:0033647 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.3 36.8 GO:0000790 nuclear chromatin(GO:0000790)
0.3 7.0 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.3 2.1 GO:0005787 signal peptidase complex(GO:0005787)
0.3 0.9 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.3 3.4 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.3 25.6 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.3 3.1 GO:0005839 proteasome core complex(GO:0005839) proteasome core complex, beta-subunit complex(GO:0019774)
0.2 4.7 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.2 69.4 GO:0005774 vacuolar membrane(GO:0005774)
0.2 0.7 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.2 4.0 GO:0005753 mitochondrial proton-transporting ATP synthase complex(GO:0005753)
0.2 6.4 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.2 12.0 GO:0090406 pollen tube(GO:0090406)
0.2 5.6 GO:0005764 lysosome(GO:0005764)
0.2 4.5 GO:0008023 transcription elongation factor complex(GO:0008023)
0.2 8.4 GO:0005797 Golgi medial cisterna(GO:0005797)
0.2 14.4 GO:0015629 actin cytoskeleton(GO:0015629)
0.2 0.6 GO:0005652 nuclear lamina(GO:0005652)
0.2 4.7 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.2 2.4 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.2 6.8 GO:0000137 Golgi cis cisterna(GO:0000137)
0.2 4.9 GO:0000145 exocyst(GO:0000145)
0.2 1.6 GO:0072546 ER membrane protein complex(GO:0072546)
0.2 1.9 GO:0008180 COP9 signalosome(GO:0008180)
0.1 2.7 GO:0032993 protein-DNA complex(GO:0032993)
0.1 16.7 GO:0005768 endosome(GO:0005768)
0.1 3.6 GO:0044452 nucleolar part(GO:0044452)
0.1 2.0 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.8 GO:0030117 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.1 6.4 GO:0000785 chromatin(GO:0000785)
0.1 2.1 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.1 11.8 GO:0005654 nucleoplasm(GO:0005654)
0.1 4.5 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 3.6 GO:0031201 SNARE complex(GO:0031201)
0.1 923.2 GO:0005634 nucleus(GO:0005634)
0.1 0.7 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 2.1 GO:0005795 Golgi stack(GO:0005795)
0.1 1.9 GO:0005811 lipid particle(GO:0005811)
0.1 0.5 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.6 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 2.5 GO:0005789 endoplasmic reticulum membrane(GO:0005789)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
6.6 19.8 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
6.4 31.8 GO:0016768 spermine synthase activity(GO:0016768)
6.3 6.3 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
5.6 16.8 GO:0019776 Atg8 ligase activity(GO:0019776)
4.7 14.1 GO:0010331 gibberellin binding(GO:0010331)
4.0 15.9 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
3.9 27.3 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
3.8 11.5 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
3.8 15.1 GO:0004385 guanylate kinase activity(GO:0004385)
3.7 11.1 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
3.5 10.6 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
3.3 13.0 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
3.2 28.9 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
3.1 18.8 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
3.0 15.0 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
3.0 9.0 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
3.0 14.9 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
2.7 10.9 GO:0019172 glyoxalase III activity(GO:0019172)
2.7 8.1 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
2.7 10.8 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
2.7 2.7 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
2.6 15.6 GO:0015369 calcium:proton antiporter activity(GO:0015369)
2.6 7.8 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
2.6 15.5 GO:0016531 copper chaperone activity(GO:0016531)
2.6 7.7 GO:0030975 thiamine diphosphokinase activity(GO:0004788) thiamine binding(GO:0030975)
2.6 10.3 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
2.6 7.7 GO:0008936 nicotinamidase activity(GO:0008936)
2.5 7.6 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
2.5 15.3 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
2.5 20.3 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
2.5 7.6 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
2.5 7.5 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
2.5 19.8 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
2.4 7.3 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
2.3 16.4 GO:0047893 flavonol 3-O-glucosyltransferase activity(GO:0047893) daphnetin 3-O-glucosyltransferase activity(GO:0102360)
2.3 6.9 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
2.3 32.0 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
2.3 16.0 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
2.3 20.3 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
2.2 9.0 GO:0032791 lead ion binding(GO:0032791)
2.2 8.9 GO:0036218 dTTP diphosphatase activity(GO:0036218)
2.2 6.5 GO:0016992 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
2.1 12.7 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
2.1 8.3 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
2.0 14.2 GO:0008022 protein C-terminus binding(GO:0008022)
2.0 14.1 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
2.0 16.1 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
2.0 14.0 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
2.0 8.0 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
2.0 19.9 GO:0047372 acylglycerol lipase activity(GO:0047372)
1.9 5.7 GO:0019788 NEDD8 transferase activity(GO:0019788)
1.9 13.3 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
1.8 5.4 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
1.8 14.4 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
1.8 7.0 GO:0008301 DNA binding, bending(GO:0008301)
1.7 5.2 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
1.7 26.1 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
1.7 5.2 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
1.7 12.0 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
1.7 5.1 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
1.7 18.6 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
1.7 24.9 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
1.6 4.9 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
1.6 14.7 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
1.6 11.0 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
1.6 60.5 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
1.5 7.7 GO:0043225 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
1.5 4.6 GO:0052744 phosphatidylinositol monophosphate phosphatase activity(GO:0052744)
1.5 7.5 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
1.5 19.3 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
1.5 7.4 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
1.5 8.8 GO:0050302 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
1.5 5.9 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
1.5 7.4 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
1.5 7.3 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
1.4 5.8 GO:0031516 far-red light photoreceptor activity(GO:0031516)
1.4 4.3 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
1.4 5.7 GO:0052743 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
1.4 2.8 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
1.4 4.1 GO:0004359 glutaminase activity(GO:0004359)
1.3 9.1 GO:0004834 tryptophan synthase activity(GO:0004834)
1.3 3.9 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
1.3 11.3 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
1.2 4.8 GO:0070006 metalloaminopeptidase activity(GO:0070006)
1.2 21.7 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
1.2 2.4 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
1.2 9.3 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
1.2 3.5 GO:0000823 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
1.1 19.4 GO:0016157 sucrose synthase activity(GO:0016157)
1.1 3.3 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
1.1 10.9 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
1.1 5.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
1.1 20.1 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
1.1 7.4 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
1.1 7.4 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
1.0 5.1 GO:0030371 translation repressor activity(GO:0030371)
1.0 4.0 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
1.0 13.2 GO:0002020 protease binding(GO:0002020)
1.0 11.1 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
1.0 6.0 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
1.0 8.0 GO:0004143 diacylglycerol kinase activity(GO:0004143)
1.0 13.1 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
1.0 22.8 GO:0097602 cullin family protein binding(GO:0097602)
1.0 3.0 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
1.0 5.8 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
1.0 3.8 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
1.0 4.8 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.9 2.8 GO:0047912 galacturonokinase activity(GO:0047912)
0.9 8.5 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.9 6.6 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.9 4.7 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.9 6.5 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.9 5.5 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.9 2.7 GO:0032131 alkylated DNA binding(GO:0032131)
0.9 2.7 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.9 13.1 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.9 7.0 GO:0009916 alternative oxidase activity(GO:0009916)
0.9 5.2 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.9 4.3 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.9 4.3 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.9 2.6 GO:1990259 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.9 4.3 GO:0004594 pantothenate kinase activity(GO:0004594)
0.9 3.4 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.8 106.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.8 11.5 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.8 2.4 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.8 8.0 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.8 3.2 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.8 4.0 GO:0004049 anthranilate synthase activity(GO:0004049)
0.8 9.3 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.8 12.3 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.8 6.1 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.8 8.3 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.8 8.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.7 14.2 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.7 10.4 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.7 4.5 GO:0046923 ER retention sequence binding(GO:0046923)
0.7 2.9 GO:0051980 iron chelate transmembrane transporter activity(GO:0015603) iron-nicotianamine transmembrane transporter activity(GO:0051980)
0.7 3.6 GO:1902936 phosphatidylinositol bisphosphate binding(GO:1902936)
0.7 3.6 GO:0047780 citrate dehydratase activity(GO:0047780)
0.7 11.5 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.7 2.8 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.7 3.5 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.7 2.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.7 26.0 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.7 2.8 GO:0047517 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)
0.7 6.3 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.7 13.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.7 8.3 GO:0003996 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.7 10.0 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.7 2.0 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.7 3.3 GO:0034511 U3 snoRNA binding(GO:0034511)
0.6 34.2 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.6 16.8 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.6 6.4 GO:0035198 miRNA binding(GO:0035198)
0.6 8.3 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.6 2.5 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.6 2.5 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.6 5.7 GO:0004017 adenylate kinase activity(GO:0004017)
0.6 3.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.6 6.9 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.6 1.9 GO:0047443 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.6 2.5 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.6 28.7 GO:0017137 Rab GTPase binding(GO:0017137)
0.6 3.6 GO:0003933 GTP cyclohydrolase activity(GO:0003933)
0.6 25.3 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.6 1.8 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.6 8.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.6 42.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.6 2.3 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.6 8.6 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.6 11.3 GO:0019902 phosphatase binding(GO:0019902)
0.6 17.3 GO:0031593 polyubiquitin binding(GO:0031593)
0.6 8.8 GO:0035064 methylated histone binding(GO:0035064)
0.5 2.7 GO:0004325 ferrochelatase activity(GO:0004325)
0.5 1.6 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.5 2.1 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.5 1.6 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.5 16.5 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.5 10.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.5 21.4 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.5 2.0 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.5 1.5 GO:0032405 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.5 5.8 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.5 6.7 GO:0051117 ATPase binding(GO:0051117)
0.5 13.8 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.5 28.6 GO:0004364 glutathione transferase activity(GO:0004364)
0.5 3.3 GO:0001671 ATPase activator activity(GO:0001671)
0.5 11.3 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.5 1.9 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.5 8.9 GO:0008134 transcription factor binding(GO:0008134)
0.5 4.7 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.5 4.6 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.5 5.5 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.5 4.1 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.5 2.7 GO:0030527 structural constituent of chromatin(GO:0030527)
0.5 5.4 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.4 9.0 GO:0030276 clathrin binding(GO:0030276)
0.4 5.8 GO:0051879 Hsp90 protein binding(GO:0051879)
0.4 3.1 GO:0010011 auxin binding(GO:0010011)
0.4 8.4 GO:0016844 strictosidine synthase activity(GO:0016844)
0.4 0.9 GO:0004106 chorismate mutase activity(GO:0004106)
0.4 16.6 GO:0004707 MAP kinase activity(GO:0004707)
0.4 5.2 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.4 2.4 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.4 5.9 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.4 3.9 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.4 3.1 GO:0070300 phosphatidic acid binding(GO:0070300)
0.4 3.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.4 4.5 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.4 3.3 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.4 14.0 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.4 4.0 GO:0016161 beta-amylase activity(GO:0016161)
0.4 124.2 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.4 20.0 GO:0010857 calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.4 1.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.4 3.2 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.4 8.7 GO:0008143 poly(A) binding(GO:0008143)
0.4 3.6 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.4 2.1 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.3 4.9 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.3 1.4 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.3 1.7 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.3 3.7 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.3 38.1 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.3 1.0 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.3 26.4 GO:0004601 peroxidase activity(GO:0004601)
0.3 2.3 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.3 17.4 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.3 11.5 GO:0016597 amino acid binding(GO:0016597)
0.3 10.4 GO:0003713 transcription coactivator activity(GO:0003713)
0.3 41.0 GO:0003779 actin binding(GO:0003779)
0.3 2.2 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.3 4.6 GO:0004629 phospholipase C activity(GO:0004629)
0.3 4.3 GO:0017025 TBP-class protein binding(GO:0017025)
0.3 1.2 GO:0033862 UMP kinase activity(GO:0033862)
0.3 1.2 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.3 2.1 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.3 1.8 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.3 4.7 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.3 0.9 GO:0004177 aminopeptidase activity(GO:0004177)
0.3 3.5 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.3 9.0 GO:0043130 ubiquitin binding(GO:0043130)
0.3 0.9 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.3 1.7 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.3 3.7 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.3 1.1 GO:0097617 annealing activity(GO:0097617)
0.3 0.8 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.3 9.3 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.3 16.4 GO:0008237 metallopeptidase activity(GO:0008237)
0.3 1.9 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.3 33.5 GO:0003682 chromatin binding(GO:0003682)
0.3 2.2 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.3 1.3 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.3 3.1 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.3 2.1 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.3 15.9 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.2 0.7 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.2 6.7 GO:0050897 cobalt ion binding(GO:0050897)
0.2 204.9 GO:0043565 sequence-specific DNA binding(GO:0043565)
0.2 1.2 GO:0000702 oxidized base lesion DNA N-glycosylase activity(GO:0000702)
0.2 3.3 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.2 2.8 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.2 19.1 GO:0016667 oxidoreductase activity, acting on a sulfur group of donors(GO:0016667)
0.2 79.9 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.2 2.3 GO:0008097 5S rRNA binding(GO:0008097)
0.2 7.4 GO:0003714 transcription corepressor activity(GO:0003714)
0.2 6.4 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.2 9.0 GO:0030145 manganese ion binding(GO:0030145)
0.2 6.6 GO:0016838 carbon-oxygen lyase activity, acting on phosphates(GO:0016838)
0.2 2.0 GO:0008536 Ran GTPase binding(GO:0008536)
0.2 7.8 GO:0046915 transition metal ion transmembrane transporter activity(GO:0046915)
0.2 3.8 GO:0005543 phospholipid binding(GO:0005543)
0.2 2.3 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.2 5.6 GO:0050661 NADP binding(GO:0050661)
0.2 0.8 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.2 1.3 GO:0004849 uridine kinase activity(GO:0004849)
0.2 0.9 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.2 2.7 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.2 3.1 GO:0008066 glutamate receptor activity(GO:0008066)
0.2 1.7 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.2 4.0 GO:0042562 hormone binding(GO:0042562)
0.2 2.3 GO:0031369 translation initiation factor binding(GO:0031369)
0.2 1.8 GO:0045735 nutrient reservoir activity(GO:0045735)
0.2 2.9 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.2 2.4 GO:0015248 sterol transporter activity(GO:0015248)
0.2 4.3 GO:0042393 histone binding(GO:0042393)
0.2 4.7 GO:0005319 lipid transporter activity(GO:0005319)
0.2 7.4 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 2.8 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 2.0 GO:0019905 syntaxin binding(GO:0019905)
0.1 3.5 GO:0005096 GTPase activator activity(GO:0005096)
0.1 7.7 GO:0005484 SNAP receptor activity(GO:0005484)
0.1 9.6 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.1 6.3 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 5.2 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.1 4.2 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.1 2.0 GO:0003725 double-stranded RNA binding(GO:0003725)
0.1 20.1 GO:0043531 ADP binding(GO:0043531)
0.1 0.4 GO:0035671 enone reductase activity(GO:0035671)
0.1 29.7 GO:0004497 monooxygenase activity(GO:0004497)
0.1 1.3 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.4 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.1 0.4 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.9 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 2.6 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 3.1 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.1 2.0 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 0.8 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.1 2.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.3 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.1 1.1 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 0.4 GO:0004348 glucosylceramidase activity(GO:0004348)
0.1 7.1 GO:0051082 unfolded protein binding(GO:0051082)
0.1 1.0 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 4.3 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.1 0.4 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 0.9 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 1.4 GO:0017069 snRNA binding(GO:0017069)
0.1 1.7 GO:0019888 phosphatase regulator activity(GO:0019208) protein phosphatase regulator activity(GO:0019888)
0.1 0.2 GO:0004424 imidazoleglycerol-phosphate dehydratase activity(GO:0004424)
0.1 0.9 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 4.8 GO:0016298 lipase activity(GO:0016298)
0.1 1.4 GO:0010181 FMN binding(GO:0010181)
0.0 2.9 GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds(GO:0016810)
0.0 0.7 GO:0016018 drug binding(GO:0008144) cyclosporin A binding(GO:0016018)
0.0 0.6 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 5.1 GO:0020037 heme binding(GO:0020037)
0.0 5.6 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.2 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.3 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.5 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.5 GO:0004721 phosphoprotein phosphatase activity(GO:0004721)
0.0 0.5 GO:0051287 NAD binding(GO:0051287)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 12.2 PID CIRCADIAN PATHWAY Circadian rhythm pathway
1.5 7.7 PID S1P S1P1 PATHWAY S1P1 pathway
1.5 7.7 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.9 2.6 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.8 7.8 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.7 4.0 PID MTOR 4PATHWAY mTOR signaling pathway
0.5 4.8 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.5 1.4 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.4 2.2 PID PLK1 PATHWAY PLK1 signaling events
0.3 3.4 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.3 1.3 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II
0.2 0.7 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.2 0.7 PID FCER1 PATHWAY Fc-epsilon receptor I signaling in mast cells
0.1 0.5 PID HIF1A PATHWAY Hypoxic and oxygen homeostasis regulation of HIF-1-alpha

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
3.1 12.2 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
3.0 33.3 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
2.0 12.0 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
1.6 4.8 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
1.1 4.4 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS Genes involved in Synthesis of bile acids and bile salts
1.1 6.3 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.9 3.6 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.8 3.4 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.6 0.6 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.6 1.9 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.6 1.7 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.4 1.2 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.3 3.2 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.3 2.9 REACTOME G ALPHA I SIGNALLING EVENTS Genes involved in G alpha (i) signalling events
0.2 0.7 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.2 0.6 REACTOME MTORC1 MEDIATED SIGNALLING Genes involved in mTORC1-mediated signalling
0.2 0.5 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 1.8 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 1.7 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport