Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT5G41315

Z-value: 0.51

Transcription factors associated with AT5G41315

Gene Symbol Gene ID Gene Info
AT5G41315
AT5G41315 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GL3arTal_v1_Chr5_+_16529090_16529090-0.633.1e-04Click!

Activity profile of AT5G41315 motif

Sorted Z-values of AT5G41315 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_197974 2.47 AT3G01500.1
CA1
carbonic anhydrase 1
Chr3_-_198160 2.44 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_198664 2.41 AT3G01500.3
CA1
carbonic anhydrase 1
Chr3_-_197564 2.35 AT3G01500.4
CA1
carbonic anhydrase 1
Chr5_+_8863224 2.03 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr5_-_7738535 1.68 AT5G23060.2
AT5G23060.1
CaS
calcium sensing receptor
Chr5_-_25373904 1.63 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr1_-_28419635 1.63 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
Chr3_-_5469594 1.56 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr1_+_13208683 1.54 AT1G35680.1
RPL21C
Ribosomal protein L21
Chr5_-_17581275 1.52 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr2_-_15137012 1.48 AT2G36050.1
OFP15
ovate family protein 15
Chr4_-_18428412 1.47 AT4G39710.2
AT4G39710.3
AT4G39710.1
PnsL4
FK506-binding protein 16-2
Chr5_+_18528267 1.40 AT5G45670.1
AT5G45670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_18417568 1.30 AT3G49670.1
BAM2
Leucine-rich receptor-like protein kinase family protein
Chr2_+_11550705 1.27 AT2G27060.1
AT2G27060.2
AT2G27060.3
AT2G27060
Leucine-rich repeat protein kinase family protein
Chr2_-_14322082 1.22 AT2G33850.1
AT2G33850
E6-like protein
Chr1_+_27452748 1.18 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr2_+_18417243 1.17 AT2G44640.1
AT2G44640
TRIGALACTOSYLDIACYLGLYCEROL-like protein
Chr5_+_4535367 1.16 AT5G14060.1
AT5G14060.2
AT5G14060.3
CARAB-AK-LYS
Aspartate kinase family protein
Chr1_+_6460598 1.11 AT1G18730.3
AT1G18730.2
AT1G18730.4
PnsB4
NDH dependent flow 6
Chr4_+_14566183 1.11 AT4G29740.3
AT4G29740.2
AT4G29740.1
CKX4
cytokinin oxidase 4
Chr5_-_26845294 1.10 AT5G67280.1
RLK
receptor-like kinase
Chr2_+_15117015 1.08 AT2G36000.2
AT2G36000.1
EMB3114
Mitochondrial transcription termination factor family protein
Chr3_-_23089357 1.05 AT3G62390.2
AT3G62390.1
TBL6
TRICHOME BIREFRINGENCE-LIKE 6
Chr4_-_18068293 1.02 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr4_-_18067873 1.01 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr5_-_22232949 0.97 AT5G54720.1
AT5G54720
Ankyrin repeat family protein
Chr5_-_26555781 0.97 AT5G66530.1
AT5G66530.2
AT5G66530.3
AT5G66530
Galactose mutarotase-like superfamily protein
Chr4_+_13992210 0.96 AT4G28220.2
AT4G28220.1
NDB1
NAD(P)H dehydrogenase B1
Chr1_+_6460844 0.93 AT1G18730.5
PnsB4
NDH dependent flow 6
Chr1_-_25714807 0.92 AT1G68530.2
KCS6
3-ketoacyl-CoA synthase 6
Chr1_-_25715024 0.91 AT1G68530.1
KCS6
3-ketoacyl-CoA synthase 6
Chr1_+_6460403 0.90 AT1G18730.1
PnsB4
NDH dependent flow 6
Chr2_+_19492867 0.90 AT2G47500.1
AT2G47500.2
AT2G47500
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein
Chr5_+_6138717 0.89 AT5G18500.3
AT5G18500.4
AT5G18500.5
AT5G18500
Protein kinase superfamily protein
Chr1_-_28453820 0.88 AT1G75780.1
TUB1
tubulin beta-1 chain
Chr5_+_23903872 0.87 AT5G59250.1
AT5G59250
Major facilitator superfamily protein
Chr3_-_7434743 0.86 AT3G21190.1
MSR1
O-fucosyltransferase family protein
Chr5_-_18776735 0.86 AT5G46290.2
AT5G46290.3
AT5G46290.1
KASI
3-ketoacyl-acyl carrier protein synthase I
Chr5_+_6138242 0.84 AT5G18500.1
AT5G18500.2
AT5G18500
Protein kinase superfamily protein
Chr1_+_5361865 0.83 AT1G15570.1
CYCA2%3B3
CYCLIN A2;3
Chr3_-_5812690 0.81 AT3G17040.2
AT3G17040.4
AT3G17040.3
AT3G17040.1
HCF107
high chlorophyll fluorescent 107
Chr1_+_17065858 0.81 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr1_+_17065111 0.79 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr5_-_26555447 0.77 AT5G66530.4
AT5G66530
Galactose mutarotase-like superfamily protein
Chr4_+_15779911 0.76 AT4G32710.1
PERK14
Protein kinase superfamily protein
Chr3_-_3782954 0.75 AT3G11945.2
AT3G11945.1
HST
homogentisate prenyltransferase
Chr3_-_1958304 0.74 AT3G06430.1
PPR2
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_26884203 0.74 AT5G67385.3
AT5G67385.1
AT5G67385.5
AT5G67385.4
AT5G67385
Phototropic-responsive NPH3 family protein
Chr1_+_3611490 0.73 AT1G10850.1
AT1G10850
Leucine-rich repeat protein kinase family protein
Chr5_+_21988457 0.72 AT5G54180.1
PTAC15
plastid transcriptionally active 15
Chr3_-_19861097 0.72 AT3G53560.1
AT3G53560.2
AT3G53560
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_6138927 0.71 AT5G18500.6
AT5G18500
Protein kinase superfamily protein
Chr2_-_18873972 0.70 AT2G45850.3
AT2G45850.1
AT2G45850
AT hook motif DNA-binding family protein
Chr3_+_22607099 0.70 AT3G61080.1
AT3G61080.2
AT3G61080
Protein kinase superfamily protein
Chr5_-_26899736 0.69 AT5G67411.1
AT5G67411
GRAS family transcription factor
Chr1_-_9024081 0.68 AT1G26100.1
AT1G26100
Cytochrome b561/ferric reductase transmembrane protein family
Chr3_+_18340934 0.68 AT3G49470.1
AT3G49470.2
NACA2
nascent polypeptide-associated complex subunit alpha-like protein 2
Chr5_+_26883663 0.67 AT5G67385.2
AT5G67385
Phototropic-responsive NPH3 family protein
Chr3_+_19188844 0.66 AT3G51740.1
IMK2
inflorescence meristem receptor-like kinase 2
Chr2_-_18873684 0.66 AT2G45850.2
AT2G45850
AT hook motif DNA-binding family protein
Chr4_+_148958 0.66 AT4G00340.2
RLK4
receptor-like protein kinase 4
Chr4_+_148612 0.65 AT4G00340.1
RLK4
receptor-like protein kinase 4
Chr2_+_9354842 0.65 AT2G21960.1
AT2G21960
transmembrane protein
Chr1_+_9515114 0.65 AT1G27400.1
AT1G27400
Ribosomal protein L22p/L17e family protein
Chr1_+_2642072 0.65 AT1G08390.1
AT1G08390.2
AT1G08390
recQ-mediated instability-like protein
Chr3_+_6632637 0.64 AT3G19180.1
AT3G19180.2
PARC6
plastid division protein
Chr2_+_19534473 0.63 AT2G47630.1
AT2G47630.2
AT2G47630
alpha/beta-Hydrolases superfamily protein
Chr4_+_13515432 0.63 AT4G26900.1
AT-HF
HIS HF
Chr2_+_17044932 0.63 AT2G40840.1
DPE2
disproportionating enzyme 2
Chr1_+_25719958 0.62 AT1G68540.1
TKPR2
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_9854322 0.62 AT4G17700.1
AT4G17700
hypothetical protein
Chr1_-_17973303 0.61 AT1G48610.2
AT1G48610.1
AT1G48610
AT hook motif-containing protein
Chr4_-_16154722 0.61 AT4G33625.2
AT4G33625.3
AT4G33625.1
AT4G33625
vacuole protein
Chr2_+_19535143 0.61 AT2G47630.3
AT2G47630
alpha/beta-Hydrolases superfamily protein
Chr5_+_280674 0.59 AT5G01740.1
AT5G01740
Nuclear transport factor 2 (NTF2) family protein
Chr2_-_9460908 0.59 AT2G22250.1
AT2G22250.2
AT2G22250.3
AAT
aspartate aminotransferase
Chr3_-_3119391 0.59 AT3G10113.1
AT3G10113
Homeodomain-like superfamily protein
Chr1_+_29741728 0.59 AT1G79060.1
AT1G79060
TPRXL
Chr5_-_3249911 0.58 AT5G10330.7
AT5G10330.6
AT5G10330.2
AT5G10330.8
HPA1
histidinol phosphate aminotransferase 1
Chr1_-_19476234 0.58 AT1G52300.1
AT1G52300
Zinc-binding ribosomal protein family protein
Chr3_+_484256 0.57 AT3G02370.1
AT3G02370.4
AT3G02370.2
AT3G02370.3
AT3G02370
tRNA-splicing endonuclease subunit
Chr3_+_5061681 0.57 AT3G15030.2
AT3G15030.3
AT3G15030.4
AT3G15030.1
TCP4
TCP family transcription factor 4
Chr4_+_13844059 0.56 AT4G27760.1
FEY
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_24901882 0.55 AT1G66760.2
AT1G66760.1
AT1G66760.4
AT1G66760.3
AT1G66760
MATE efflux family protein
Chr3_-_22316611 0.55 AT3G60370.1
AT3G60370.2
AT3G60370
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Chr5_+_1319074 0.54 AT5G04590.1
SIR
sulfite reductase
Chr2_-_8730525 0.53 AT2G20240.1
TRM17
GPI-anchored adhesin-like protein, putative (DUF3741)
Chr1_+_29210496 0.53 AT1G77720.1
PPK1
putative protein kinase 1
Chr1_-_27541952 0.53 AT1G73230.1
AT1G73230
Nascent polypeptide-associated complex NAC
Chr2_+_11178064 0.52 AT2G26260.1
AT2G26260.2
3BETAHSD/D2
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
Chr4_-_16116383 0.52 AT4G33500.1
AT4G33500
Protein phosphatase 2C family protein
Chr5_-_3250648 0.51 AT5G10330.4
AT5G10330.5
AT5G10330.3
HPA1
histidinol phosphate aminotransferase 1
Chr3_+_5344989 0.51 AT3G15800.1
AT3G15800
Glycosyl hydrolase superfamily protein
Chr3_+_8941066 0.50 AT3G24520.1
HSFC1
heat shock transcription factor C1
Chr2_+_868359 0.50 AT2G02980.1
OTP85
Pentatricopeptide repeat (PPR) superfamily protein
Chr3_+_22470519 0.49 AT3G60810.1
AT3G60810.2
AT3G60810
DUF1499 family protein
Chr1_-_26354613 0.49 AT1G69970.2
CLE26
CLAVATA3/ESR-RELATED 26
Chr3_+_9122197 0.49 AT3G25030.4
AT3G25030.1
AT3G25030.2
AT3G25030
RING/U-box superfamily protein
Chr1_-_28117405 0.48 AT1G74840.2
AT1G74840.1
AT1G74840
Homeodomain-like superfamily protein
Chr1_+_25720172 0.48 AT1G68540.2
TKPR2
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_17515042 0.48 AT4G37220.1
AT4G37220
Cold acclimation protein WCOR413 family
Chr5_-_26842104 0.48 AT5G67270.1
EB1C
end binding protein 1C
Chr1_+_3639835 0.46 AT1G10910.2
AT1G10910.1
EMB3103
Pentatricopeptide repeat (PPR) superfamily protein
Chr5_-_22230500 0.46 AT5G54710.1
AT5G54710
Ankyrin repeat family protein
Chr1_-_3103677 0.46 AT1G09575.2
AT1G09575
calcium uniporter-like protein (DUF607)
Chr5_-_22230663 0.46 AT5G54710.2
AT5G54710
Ankyrin repeat family protein
Chr3_+_5566367 0.46 AT3G16400.2
NSP1
nitrile specifier protein 1
Chr3_+_5566083 0.46 AT3G16400.1
NSP1
nitrile specifier protein 1
Chr4_+_2417800 0.45 AT4G04750.3
AT4G04750.2
AT4G04750.1
AT4G04750
Major facilitator superfamily protein
Chr1_+_3849201 0.45 AT1G11440.1
AT1G11440
hypothetical protein
Chr2_-_8240018 0.45 AT2G18990.1
TXND9
thioredoxin-like/ATP-binding protein
Chr5_-_17877658 0.45 AT5G44370.1
PHT4%3B6
phosphate transporter 4;6
Chr1_-_22512271 0.44 AT1G61100.1
AT1G61100.2
AT1G61100
disease resistance protein (TIR class)
Chr1_-_3137684 0.43 AT1G09690.1
AT1G09690
Translation protein SH3-like family protein
Chr5_-_900298 0.42 AT5G03555.1
NCS1
permease, cytosine/purines, uracil, thiamine, allantoin family protein
Chr1_-_29993724 0.42 AT1G79700.1
AT1G79700.3
AT1G79700.2
WRI4
Integrase-type DNA-binding superfamily protein
Chr2_+_17922019 0.42 AT2G43110.1
AT2G43110.2
AT2G43110
U3 containing 90S pre-ribosomal complex subunit
Chr1_-_22368714 0.41 AT1G60770.1
AT1G60770
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_27780855 0.41 AT1G73875.1
AT1G73875
DNAse I-like superfamily protein
Chr4_+_16118830 0.41 AT4G33520.2
AT4G33520.1
AT4G33520.3
AT4G33520.4
PAA1
P-type ATP-ase 1
Chr1_+_91342 0.41 AT1G01220.4
AT1G01220.1
AT1G01220.3
AT1G01220.2
AT1G01220.6
AT1G01220.5
FKGP
L-fucokinase/GDP-L-fucose pyrophosphorylase
Chr4_-_13383641 0.40 AT4G26500.1
CPSUFE
chloroplast sulfur E
Chr2_+_9488413 0.40 AT2G22330.2
AT2G22330.1
CYP79B3
cytochrome P450, family 79, subfamily B, polypeptide 3
Chr1_-_3103176 0.40 AT1G09575.1
AT1G09575
calcium uniporter-like protein (DUF607)
Chr3_+_1086516 0.40 AT3G04140.1
AT3G04140
Ankyrin repeat family protein
Chr5_+_7741792 0.39 AT5G23070.1
TK1b
Thymidine kinase
Chr5_+_454777 0.39 AT5G02250.1
EMB2730
Ribonuclease II/R family protein
Chr2_-_12702443 0.39 AT2G29720.1
CTF2B
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_+_5494228 0.38 AT5G16720.1
AT5G16720
caldesmon-like protein (Protein of unknown function, DUF593)
Chr1_-_26807183 0.38 AT1G71060.1
AT1G71060
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_+_9874907 0.38 AT2G23180.1
CYP96A1
cytochrome P450, family 96, subfamily A, polypeptide 1
Chr5_-_24574387 0.38 AT5G61070.1
HDA18
histone deacetylase of the RPD3/HDA1 superfamily 18
Chr4_+_17516424 0.37 AT4G37230.1
AT4G37230
Photosystem II manganese-stabilising protein (PsbO) family
Chr5_-_5642623 0.37 AT5G17160.1
AT5G17160
aspartic/glutamic acid-rich protein
Chr1_+_7029629 0.36 AT1G20300.1
AT1G20300
Pentatricopeptide repeat (PPR) superfamily protein
Chr1_-_2751620 0.36 AT1G08640.1
CJD1
Chloroplast J-like domain 1
Chr4_+_9771297 0.35 AT4G17520.1
AT4G17520
Hyaluronan / mRNA binding family
Chr4_+_8309384 0.35 AT4G14450.1
AT4G14450
hypothetical protein
Chr1_+_27781006 0.35 AT1G73875.2
AT1G73875.3
AT1G73875
DNAse I-like superfamily protein
Chr1_+_91642 0.35 AT1G01220.7
AT1G01220.8
FKGP
L-fucokinase/GDP-L-fucose pyrophosphorylase
Chr3_-_1970946 0.34 AT3G06435.2
AT3G06435
Expressed protein
Chr3_+_9124270 0.34 AT3G25040.1
ERD2B
endoplasmic reticulum retention defective 2B
Chr5_-_277641 0.34 AT5G01730.9
AT5G01730.3
AT5G01730.8
AT5G01730.10
AT5G01730.4
AT5G01730.11
SCAR4
SCAR family protein 4
Chr2_-_7685176 0.34 AT2G17695.2
AT2G17695.1
AT2G17695.3
AT2G17695
outer envelope protein
Chr4_+_18432659 0.34 AT4G39730.1
PLAT1
Lipase/lipooxygenase, PLAT/LH2 family protein
Chr2_-_11145103 0.34 AT2G26180.1
IQD6
IQ-domain 6
Chr5_-_26425448 0.34 AT5G66080.1
AT5G66080
Protein phosphatase 2C family protein
Chr1_+_26545189 0.33 AT1G70430.2
AT1G70430.3
AT1G70430.1
AT1G70430.4
AT1G70430
Protein kinase superfamily protein
Chr3_+_2044352 0.33 AT3G06560.1
PAPS3
poly(A) polymerase 3
Chr1_+_28449905 0.33 AT1G75770.1
AT1G75770
hypothetical protein
Chr5_+_16394462 0.33 AT5G40910.2
AT5G40910.4
AT5G40910.5
AT5G40910.3
AT5G40910.6
AT5G40910.1
AT5G40910.7
AT5G40910
Disease resistance protein (TIR-NBS-LRR class) family
Chr4_-_15317135 0.33 AT4G31600.2
AT4G31600.1
UTr7
UDP-N-acetylglucosamine (UAA) transporter family
Chr5_-_3250964 0.32 AT5G10330.1
HPA1
histidinol phosphate aminotransferase 1
Chr1_-_5858446 0.32 AT1G17140.1
AT1G17140.2
ICR1
interactor of constitutive active rops 1
Chr1_-_29993058 0.32 AT1G79700.4
WRI4
Integrase-type DNA-binding superfamily protein
Chr2_-_12722463 0.32 AT2G29790.2
AT2G29790.3
AT2G29790.1
AT2G29790
maternally expressed family protein
Chr3_+_17527507 0.32 AT3G47570.1
AT3G47570
Leucine-rich repeat protein kinase family protein
Chr2_-_15641773 0.32 AT2G37240.1
AT2G37240
Thioredoxin superfamily protein
Chr5_+_16529455 0.31 AT5G41315.1
GL3
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_7911843 0.31 AT1G22410.1
AT1G22410
Class-II DAHP synthetase family protein
Chr5_-_26898016 0.31 AT5G67410.1
AT5G67410
transcriptional regulator of RNA polII, SAGA, subunit
Chr3_-_1970784 0.31 AT3G06435.1
AT3G06435
Expressed protein
Chr5_-_277886 0.31 AT5G01730.1
AT5G01730.2
AT5G01730.7
SCAR4
SCAR family protein 4
Chr5_-_26343546 0.31 AT5G65830.1
RLP57
receptor like protein 57
Chr5_-_26341789 0.30 AT5G65820.1
AT5G65820
Pentatricopeptide repeat (PPR) superfamily protein
Chr1_-_28448646 0.30 AT1G75760.3
AT1G75760.1
AT1G75760.2
AT1G75760
ER lumen protein retaining receptor family protein
Chr1_+_7554671 0.30 AT1G21560.2
AT1G21560.3
AT1G21560.6
AT1G21560.4
AT1G21560.5
AT1G21560.1
AT1G21560
hypothetical protein
Chr5_+_16395507 0.30 AT5G40910.9
AT5G40910
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_19371135 0.29 AT3G52230.1
AT3G52230
hypothetical protein
Chr5_+_20317405 0.29 AT5G49945.1
AT5G49945
hypothetical protein (DUF1682)
Chr2_-_5656518 0.29 AT2G13570.1
NF-YB7
nuclear factor Y, subunit B7
Chr5_-_24096532 0.29 AT5G59800.1
MBD7
methyl-CPG-binding domain 7
Chr5_-_26424653 0.29 AT5G66080.2
AT5G66080
Protein phosphatase 2C family protein
Chr3_+_9120859 0.29 AT3G25030.3
AT3G25030
RING/U-box superfamily protein
Chr4_-_13690478 0.29 AT4G27340.2
AT4G27340.3
AT4G27340.1
AT4G27340
Met-10+ like family protein
Chr1_-_3637250 0.29 AT1G10900.3
AT1G10900.2
AT1G10900.1
AT1G10900
Phosphatidylinositol-4-phosphate 5-kinase family protein
Chr5_-_26897679 0.29 AT5G67410.2
AT5G67410
transcriptional regulator of RNA polII, SAGA, subunit
Chr4_+_1321758 0.29 AT4G02990.1
AT4G02990.2
BSM
Mitochondrial transcription termination factor family protein
Chr1_+_28423896 0.28 AT1G75700.1
HVA22G
HVA22-like protein G
Chr1_+_28423495 0.28 AT1G75700.2
AT1G75700.3
HVA22G
HVA22-like protein G
Chr1_-_11909049 0.28 AT1G32860.1
AT1G32860
Glycosyl hydrolase superfamily protein
Chr2_-_7821379 0.28 AT2G17970.10
AT2G17970.6
AT2G17970.7
AT2G17970.5
AT2G17970.8
AT2G17970.4
AT2G17970.1
AT2G17970.9
AT2G17970.2
AT2G17970.3
AT2G17970
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_4391671 0.28 AT1G12890.1
AT1G12890
Integrase-type DNA-binding superfamily protein
Chr3_-_8936279 0.28 AT3G24515.1
AT3G24515.2
AT3G24515.4
AT3G24515.3
UBC37
ubiquitin-conjugating enzyme 37
Chr1_-_88409 0.27 AT1G01200.1
RABA3
RAB GTPase homolog A3
Chr3_+_19474945 0.27 AT3G52525.1
OFP6
ovate family protein 6
Chr5_+_24003888 0.27 AT5G59570.1
AT5G59570.2
BOA
Homeodomain-like superfamily protein
Chr3_+_18998182 0.27 AT3G51140.2
AT3G51140
DnaJ (DUF3353)
Chr5_+_16395162 0.27 AT5G40910.8
AT5G40910
Disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_10076809 0.27 AT3G27280.1
AT3G27280.2
PHB4
prohibitin 4
Chr5_+_5229513 0.27 AT5G16020.1
GEX3
gamete-expressed 3
Chr5_+_16529090 0.27 AT5G41315.2
AT5G41315.3
GL3
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_12972685 0.26 AT4G25370.1
AT4G25370
Double Clp-N motif protein
Chr1_-_6418690 0.26 AT1G18640.3
AT1G18640.2
PSP
3-phosphoserine phosphatase
Chr5_+_17857325 0.26 AT5G44330.1
AT5G44330
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_+_17695496 0.26 AT4G37660.1
AT4G37660
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Chr4_+_8475101 0.26 AT4G14760.3
AT4G14760.1
NET1B
kinase interacting (KIP1-like) family protein
Chr4_-_3762441 0.26 AT4G06632.1
AT4G06632

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G41315

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 9.7 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.3 1.7 GO:0071277 cellular response to calcium ion(GO:0071277)
0.3 1.3 GO:0010480 microsporocyte differentiation(GO:0010480)
0.3 1.6 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.2 0.7 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.2 1.2 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 0.8 GO:1990428 miRNA transport(GO:1990428)
0.2 1.1 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 0.5 GO:0051447 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.2 1.2 GO:0051127 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 0.6 GO:0000023 maltose metabolic process(GO:0000023)
0.1 2.9 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.9 GO:0097502 mannosylation(GO:0097502)
0.1 2.0 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.5 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 1.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 0.3 GO:0015786 UDP-glucose transport(GO:0015786)
0.1 0.8 GO:0042350 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.1 0.5 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.7 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.3 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 0.6 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.4 GO:0030856 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.1 0.9 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.9 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.4 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 1.2 GO:0032365 intracellular lipid transport(GO:0032365)
0.1 0.4 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.4 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 0.4 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.1 0.6 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.1 0.2 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.1 0.4 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 1.4 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.7 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.1 1.0 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.8 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.0 1.8 GO:0042335 cuticle development(GO:0042335)
0.0 0.6 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.5 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.3 GO:0009303 rRNA transcription(GO:0009303)
0.0 0.2 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.2 GO:1901465 positive regulation of tetrapyrrole biosynthetic process(GO:1901465)
0.0 0.5 GO:0032409 regulation of transporter activity(GO:0032409)
0.0 0.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.5 GO:0010207 photosystem II assembly(GO:0010207)
0.0 1.9 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 1.2 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.5 GO:0009750 response to fructose(GO:0009750)
0.0 0.1 GO:0019499 cyanide metabolic process(GO:0019499)
0.0 0.2 GO:0046451 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 1.2 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.3 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.2 GO:0030308 positive regulation of mitochondrion organization(GO:0010822) negative regulation of cell growth(GO:0030308)
0.0 0.1 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 1.0 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.3 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.4 GO:0080167 response to karrikin(GO:0080167)
0.0 0.2 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.1 GO:0010444 G1/S transition of mitotic cell cycle(GO:0000082) guard mother cell cytokinesis(GO:0010235) guard mother cell differentiation(GO:0010444) meiotic cytokinesis(GO:0033206)
0.0 0.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.7 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 0.1 GO:0016120 carotene biosynthetic process(GO:0016120)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 10.2 GO:0010319 stromule(GO:0010319)
0.2 1.0 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.2 1.6 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 2.9 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 1.2 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 0.5 GO:0035371 microtubule plus-end(GO:0035371)
0.1 0.6 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 0.9 GO:0031209 SCAR complex(GO:0031209)
0.0 0.6 GO:0000124 SAGA complex(GO:0000124)
0.0 2.0 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.4 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.7 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.3 GO:0010369 chromocenter(GO:0010369)
0.0 0.1 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.0 0.4 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.4 GO:0000776 kinetochore(GO:0000776)
0.0 4.7 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0005801 cis-Golgi network(GO:0005801)
0.0 2.6 GO:0042170 plastid membrane(GO:0042170)
0.0 8.1 GO:0009532 plastid stroma(GO:0009532)
0.0 0.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.3 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 5.8 GO:0009579 thylakoid(GO:0009579)
0.0 0.2 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 1.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.4 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.3 1.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.3 9.7 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 0.8 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.2 0.7 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.2 1.2 GO:0004072 aspartate kinase activity(GO:0004072)
0.2 0.6 GO:0004359 glutaminase activity(GO:0004359)
0.2 0.6 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134) heteropolysaccharide binding(GO:0010297)
0.2 0.6 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 1.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.2 1.2 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 0.5 GO:0051010 microtubule plus-end binding(GO:0051010)
0.2 1.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.2 1.7 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.4 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.1 0.5 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 0.4 GO:0010242 oxygen evolving activity(GO:0010242)
0.1 1.3 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.3 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 0.2 GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.1 0.4 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 1.8 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.6 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.8 GO:0070568 guanylyltransferase activity(GO:0070568)
0.1 0.3 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 0.3 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 1.6 GO:0008810 cellulase activity(GO:0008810)
0.1 1.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.3 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.2 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 0.6 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.2 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.0 1.0 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.4 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.3 GO:0004096 catalase activity(GO:0004096)
0.0 0.5 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 2.0 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.2 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.0 0.2 GO:0005536 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.3 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 0.4 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 1.5 GO:0043621 protein self-association(GO:0043621)
0.0 0.8 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.1 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.0 0.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.8 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.9 GO:0019843 rRNA binding(GO:0019843)
0.0 0.0 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.0 0.2 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.6 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.3 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 1.0 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.4 GO:0015205 nucleobase transmembrane transporter activity(GO:0015205)
0.0 2.9 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.6 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.5 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.1 GO:0016859 cis-trans isomerase activity(GO:0016859)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 9.7 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.4 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.1 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 9.7 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 0.3 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC