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GSE58827: Dynamics of the Mouse Liver

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Results for Bsx

Z-value: 0.58

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Transcription factors associated with Bsx

Gene Symbol Gene ID Gene Info
Bsx
ENSMUSG00000054360.3 brain specific homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Bsxmm10_v2_chr9_+_40873981_408741270.231.8e-01Click!

Activity profile of Bsx motif

Sorted Z-values of Bsx motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr7_-_119459266 3.74 ENSMUST00000033255.5
Gp2
glycoprotein 2 (zymogen granule membrane)
chr11_+_58640394 2.44 ENSMUST00000075084.4
Trim58
tripartite motif-containing 58
chr5_-_137072254 2.17 ENSMUST00000077523.3
ENSMUST00000041388.4
Serpine1
serine (or cysteine) peptidase inhibitor, clade E, member 1
chr1_+_40439767 1.91 ENSMUST00000173514.1
Il1rl1
interleukin 1 receptor-like 1
chr2_-_113829069 1.84 ENSMUST00000024005.7
Scg5
secretogranin V
chr3_-_116253467 1.47 ENSMUST00000090473.5
Gpr88
G-protein coupled receptor 88
chr17_-_47833169 1.08 ENSMUST00000131971.1
ENSMUST00000129360.1
ENSMUST00000113280.1
ENSMUST00000132125.1
Mdfi
MyoD family inhibitor
chr2_-_32387760 1.06 ENSMUST00000050785.8
Lcn2
lipocalin 2
chr1_+_40439627 1.02 ENSMUST00000097772.3
Il1rl1
interleukin 1 receptor-like 1
chr17_-_47833256 1.02 ENSMUST00000152455.1
ENSMUST00000035375.7
Mdfi
MyoD family inhibitor
chr19_-_56389877 0.95 ENSMUST00000166203.1
ENSMUST00000167239.1
ENSMUST00000040711.8
ENSMUST00000095947.4
ENSMUST00000073536.6
Nrap
nebulin-related anchoring protein
chr4_-_115133977 0.87 ENSMUST00000051400.7
Cyp4x1
cytochrome P450, family 4, subfamily x, polypeptide 1
chr6_+_29694204 0.87 ENSMUST00000046750.7
ENSMUST00000115250.3
Tspan33
tetraspanin 33
chr13_-_23745511 0.84 ENSMUST00000091752.2
Hist1h3c
histone cluster 1, H3c
chr3_-_15575065 0.83 ENSMUST00000091319.4
Sirpb1b
signal-regulatory protein beta 1B
chr16_+_52031549 0.78 ENSMUST00000114471.1
Cblb
Casitas B-lineage lymphoma b
chr11_-_98053415 0.69 ENSMUST00000017544.2
Stac2
SH3 and cysteine rich domain 2
chr2_+_69219971 0.68 ENSMUST00000005364.5
ENSMUST00000112317.2
G6pc2
glucose-6-phosphatase, catalytic, 2
chr12_+_35992900 0.64 ENSMUST00000020898.5
Agr2
anterior gradient 2
chr17_+_34039437 0.63 ENSMUST00000131134.1
ENSMUST00000087497.4
ENSMUST00000114255.1
ENSMUST00000114252.1
Col11a2
collagen, type XI, alpha 2
chr8_+_57511833 0.62 ENSMUST00000067925.6
Hmgb2
high mobility group box 2
chr17_-_31277327 0.60 ENSMUST00000024832.7
Rsph1
radial spoke head 1 homolog (Chlamydomonas)
chr19_+_4594312 0.55 ENSMUST00000113825.2
Pcx
pyruvate carboxylase
chr9_-_95750335 0.54 ENSMUST00000053785.3
Trpc1
transient receptor potential cation channel, subfamily C, member 1
chr6_-_50456085 0.52 ENSMUST00000146341.1
ENSMUST00000071728.4
Osbpl3
oxysterol binding protein-like 3
chr4_-_41464816 0.52 ENSMUST00000108055.2
ENSMUST00000154535.1
ENSMUST00000030148.5
Kif24
kinesin family member 24
chr15_+_92597104 0.46 ENSMUST00000035399.8
Pdzrn4
PDZ domain containing RING finger 4
chr7_+_35802593 0.45 ENSMUST00000052454.2
E130304I02Rik
RIKEN cDNA E130304I02 gene
chr2_-_110362985 0.45 ENSMUST00000099626.3
Fibin
fin bud initiation factor homolog (zebrafish)
chr1_+_130731963 0.44 ENSMUST00000039323.6
AA986860
expressed sequence AA986860
chr7_+_3645267 0.43 ENSMUST00000038913.9
Cnot3
CCR4-NOT transcription complex, subunit 3
chr2_+_92375306 0.43 ENSMUST00000028650.8
Pex16
peroxisomal biogenesis factor 16
chr5_+_136987019 0.42 ENSMUST00000004968.4
Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
chr3_-_15848419 0.42 ENSMUST00000108354.1
ENSMUST00000108349.1
ENSMUST00000108352.2
ENSMUST00000108350.1
ENSMUST00000050623.4
Sirpb1c
signal-regulatory protein beta 1C
chr2_-_120154600 0.41 ENSMUST00000028755.7
Ehd4
EH-domain containing 4
chr2_+_110721587 0.40 ENSMUST00000111017.2
Muc15
mucin 15
chr6_-_124779686 0.40 ENSMUST00000147669.1
ENSMUST00000128697.1
ENSMUST00000032218.3
ENSMUST00000112475.2
Lrrc23
leucine rich repeat containing 23
chr17_+_24886643 0.40 ENSMUST00000117890.1
ENSMUST00000168265.1
ENSMUST00000120943.1
ENSMUST00000068508.6
ENSMUST00000119829.1
Spsb3
splA/ryanodine receptor domain and SOCS box containing 3
chr8_-_77517898 0.39 ENSMUST00000076316.4
Arhgap10
Rho GTPase activating protein 10
chr5_-_103977404 0.37 ENSMUST00000112803.2
Hsd17b13
hydroxysteroid (17-beta) dehydrogenase 13
chr5_-_103977326 0.36 ENSMUST00000120320.1
Hsd17b13
hydroxysteroid (17-beta) dehydrogenase 13
chr2_+_110721340 0.33 ENSMUST00000111016.2
Muc15
mucin 15
chr19_-_55241236 0.33 ENSMUST00000069183.6
Gucy2g
guanylate cyclase 2g
chr18_+_77332394 0.33 ENSMUST00000148341.1
Loxhd1
lipoxygenase homology domains 1
chr5_-_103977360 0.32 ENSMUST00000048118.8
Hsd17b13
hydroxysteroid (17-beta) dehydrogenase 13
chr6_+_72097561 0.30 ENSMUST00000069994.4
ENSMUST00000114112.1
St3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5
chr14_-_108914237 0.28 ENSMUST00000100322.2
Slitrk1
SLIT and NTRK-like family, member 1
chr2_+_85979312 0.28 ENSMUST00000170610.1
Olfr1030
olfactory receptor 1030
chr17_-_24886304 0.27 ENSMUST00000044252.5
Nubp2
nucleotide binding protein 2
chr2_+_116067213 0.26 ENSMUST00000152412.1
G630016G05Rik
RIKEN cDNA G630016G05 gene
chrX_+_56786527 0.24 ENSMUST00000144600.1
Fhl1
four and a half LIM domains 1
chr5_+_33335540 0.23 ENSMUST00000114449.3
Maea
macrophage erythroblast attacher
chr5_+_103425181 0.22 ENSMUST00000048957.9
Ptpn13
protein tyrosine phosphatase, non-receptor type 13
chr15_-_8710409 0.22 ENSMUST00000157065.1
Slc1a3
solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr11_+_90883320 0.21 ENSMUST00000142163.1
ENSMUST00000132218.1
4930405D11Rik
RIKEN cDNA 4930405D11 gene
chr2_+_3114220 0.21 ENSMUST00000072955.5
Fam171a1
family with sequence similarity 171, member A1
chr5_+_134932351 0.20 ENSMUST00000047196.7
ENSMUST00000111221.2
ENSMUST00000111219.1
ENSMUST00000068617.5
ENSMUST00000111218.1
ENSMUST00000136246.1
Wbscr27
Williams Beuren syndrome chromosome region 27 (human)
chr12_+_72441852 0.19 ENSMUST00000162159.1
Lrrc9
leucine rich repeat containing 9
chr5_-_136986829 0.19 ENSMUST00000034953.7
ENSMUST00000085941.5
Znhit1
zinc finger, HIT domain containing 1
chr12_-_112802646 0.17 ENSMUST00000124526.1
Ahnak2
AHNAK nucleoprotein 2
chr5_-_122989260 0.17 ENSMUST00000118027.1
Kdm2b
lysine (K)-specific demethylase 2B
chr5_+_144100387 0.16 ENSMUST00000041804.7
Lmtk2
lemur tyrosine kinase 2
chr10_-_53699343 0.15 ENSMUST00000163761.1
Fam184a
family with sequence similarity 184, member A
chr2_+_36230426 0.15 ENSMUST00000062069.5
Ptgs1
prostaglandin-endoperoxide synthase 1
chr7_+_101896340 0.13 ENSMUST00000035395.7
ENSMUST00000106973.1
ENSMUST00000144207.1
Anapc15
anaphase prompoting complex C subunit 15
chr5_+_138187485 0.13 ENSMUST00000110934.2
Cnpy4
canopy 4 homolog (zebrafish)
chr2_-_67194695 0.13 ENSMUST00000147939.1
Gm13598
predicted gene 13598
chr11_-_70646972 0.12 ENSMUST00000014750.8
Slc25a11
solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11
chr7_+_25077205 0.12 ENSMUST00000179556.1
ENSMUST00000053410.9
Zfp574
zinc finger protein 574
chr13_+_21716385 0.12 ENSMUST00000070124.3
Hist1h2ai
histone cluster 1, H2ai
chr11_+_116843278 0.11 ENSMUST00000106370.3
Mettl23
methyltransferase like 23
chrX_+_13632769 0.11 ENSMUST00000096492.3
Gpr34
G protein-coupled receptor 34
chr6_+_63255971 0.10 ENSMUST00000159561.1
ENSMUST00000095852.3
Grid2
glutamate receptor, ionotropic, delta 2
chr3_+_55782500 0.09 ENSMUST00000075422.4
Mab21l1
mab-21-like 1 (C. elegans)
chr12_-_55014329 0.09 ENSMUST00000172875.1
Baz1a
bromodomain adjacent to zinc finger domain 1A
chr12_+_72441933 0.09 ENSMUST00000161284.1
Lrrc9
leucine rich repeat containing 9
chr1_+_171214013 0.08 ENSMUST00000111328.1
Nr1i3
nuclear receptor subfamily 1, group I, member 3
chr6_-_34317442 0.08 ENSMUST00000154655.1
ENSMUST00000102980.4
Akr1b3
aldo-keto reductase family 1, member B3 (aldose reductase)
chr7_+_101896817 0.07 ENSMUST00000143835.1
Anapc15
anaphase prompoting complex C subunit 15
chr16_+_34690548 0.07 ENSMUST00000023532.6
Ccdc14
coiled-coil domain containing 14
chr4_-_110286581 0.06 ENSMUST00000138972.1
Elavl4
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
chrY_-_41644045 0.06 ENSMUST00000180058.1
Gm21729
predicted gene, 21729
chr13_-_105054895 0.05 ENSMUST00000063551.5
Rgs7bp
regulator of G-protein signalling 7 binding protein
chr16_-_63864114 0.05 ENSMUST00000064405.6
Epha3
Eph receptor A3
chr5_-_138187177 0.05 ENSMUST00000110937.1
ENSMUST00000139276.1
ENSMUST00000048698.7
ENSMUST00000123415.1
Taf6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr3_+_54361103 0.04 ENSMUST00000107985.3
ENSMUST00000117373.1
ENSMUST00000073012.6
ENSMUST00000081564.6
Postn
periostin, osteoblast specific factor
chr7_+_103979176 0.04 ENSMUST00000098185.1
Olfr635
olfactory receptor 635
chr2_-_116067391 0.04 ENSMUST00000140185.1
2700033N17Rik
RIKEN cDNA 2700033N17 gene
chr3_-_15426427 0.03 ENSMUST00000099201.3
Sirpb1a
signal-regulatory protein beta 1A
chr6_+_57002300 0.03 ENSMUST00000079669.4
Vmn1r6
vomeronasal 1 receptor 6
chr1_-_163725123 0.03 ENSMUST00000159679.1
Mettl11b
methyltransferase like 11B
chr4_+_62525369 0.02 ENSMUST00000062145.1
4933430I17Rik
RIKEN cDNA 4933430I17 gene
chr4_-_91376433 0.02 ENSMUST00000107109.2
ENSMUST00000107111.2
ENSMUST00000107120.1
Elavl2
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
chrY_+_43953619 0.02 ENSMUST00000179551.1
Gm21241
predicted gene, 21241
chr17_+_71781947 0.02 ENSMUST00000024854.7
Clip4
CAP-GLY domain containing linker protein family, member 4
chr3_+_59952185 0.01 ENSMUST00000094227.3
Gm9696
predicted gene 9696
chrY_+_52781462 0.01 ENSMUST00000178673.1
Gm21258
predicted gene, 21258
chr12_+_38780284 0.01 ENSMUST00000162563.1
ENSMUST00000161164.1
ENSMUST00000160996.1
Etv1
ets variant gene 1
chrY_+_29351845 0.01 ENSMUST00000180071.1
Gm21853
predicted gene, 21853
chr15_+_98092569 0.01 ENSMUST00000163507.1
Pfkm
phosphofructokinase, muscle
chr15_+_78926720 0.00 ENSMUST00000089377.5
Lgals1
lectin, galactose binding, soluble 1
chr19_+_11965817 0.00 ENSMUST00000025590.9
Osbp
oxysterol binding protein

Network of associatons between targets according to the STRING database.

First level regulatory network of Bsx

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 3.7 GO:0002386 immune response in mucosal-associated lymphoid tissue(GO:0002386)
0.7 2.2 GO:2000097 regulation of smooth muscle cell-matrix adhesion(GO:2000097)
0.4 1.5 GO:0061743 motor learning(GO:0061743)
0.3 2.9 GO:0002826 negative regulation of T-helper 1 type immune response(GO:0002826)
0.2 0.5 GO:0019074 viral genome packaging(GO:0019072) viral RNA genome packaging(GO:0019074)
0.2 0.6 GO:1903896 positive regulation of IRE1-mediated unfolded protein response(GO:1903896)
0.2 0.8 GO:0002669 positive regulation of T cell anergy(GO:0002669) positive regulation of lymphocyte anergy(GO:0002913)
0.2 1.1 GO:1901678 iron coordination entity transport(GO:1901678)
0.1 0.4 GO:0046947 hydroxylysine metabolic process(GO:0046946) hydroxylysine biosynthetic process(GO:0046947)
0.1 0.6 GO:0060023 soft palate development(GO:0060023)
0.1 0.6 GO:0045654 positive regulation of megakaryocyte differentiation(GO:0045654)
0.1 2.1 GO:0060707 trophoblast giant cell differentiation(GO:0060707)
0.1 0.4 GO:0016557 peroxisome membrane biogenesis(GO:0016557)
0.1 1.8 GO:0016486 peptide hormone processing(GO:0016486)
0.0 0.0 GO:1904207 regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.0 0.5 GO:0046541 saliva secretion(GO:0046541)
0.0 0.2 GO:0021993 initiation of neural tube closure(GO:0021993)
0.0 0.7 GO:0051156 glucose 6-phosphate metabolic process(GO:0051156)
0.0 0.1 GO:0035589 G-protein coupled purinergic nucleotide receptor signaling pathway(GO:0035589)
0.0 0.1 GO:0006059 hexitol metabolic process(GO:0006059)
0.0 0.2 GO:0043353 enucleate erythrocyte differentiation(GO:0043353)
0.0 0.1 GO:0035633 cyclooxygenase pathway(GO:0019371) maintenance of blood-brain barrier(GO:0035633)
0.0 0.2 GO:0070317 negative regulation of G0 to G1 transition(GO:0070317)
0.0 0.1 GO:0043490 malate-aspartate shuttle(GO:0043490)
0.0 0.1 GO:0097155 fasciculation of sensory neuron axon(GO:0097155)
0.0 0.2 GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) regulation of mitotic spindle checkpoint(GO:1903504)
0.0 0.3 GO:0016226 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.2 GO:0033572 transferrin transport(GO:0033572)
0.0 0.4 GO:0006907 pinocytosis(GO:0006907)
0.0 0.4 GO:0001829 trophectodermal cell differentiation(GO:0001829)
0.0 0.2 GO:0001778 plasma membrane repair(GO:0001778)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.2 GO:0042583 chromaffin granule(GO:0042583)
0.1 1.0 GO:0005927 muscle tendon junction(GO:0005927)
0.1 0.9 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)
0.1 0.2 GO:0034657 GID complex(GO:0034657)
0.1 0.4 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 0.6 GO:0072687 meiotic spindle(GO:0072687)
0.0 0.1 GO:0008623 CHRAC(GO:0008623)
0.0 0.5 GO:0097038 perinuclear endoplasmic reticulum(GO:0097038)
0.0 0.1 GO:0097454 Schwann cell microvillus(GO:0097454)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 3.4 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.7 GO:0043034 costamere(GO:0043034)
0.0 0.4 GO:0005779 integral component of peroxisomal membrane(GO:0005779)
0.0 0.3 GO:0008074 guanylate cyclase complex, soluble(GO:0008074)
0.0 1.1 GO:0005811 lipid particle(GO:0005811)
0.0 0.8 GO:0000786 nucleosome(GO:0000786)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 2.9 GO:0002113 interleukin-33 binding(GO:0002113)
0.2 0.7 GO:0050309 glucose-6-phosphatase activity(GO:0004346) sugar-terminal-phosphatase activity(GO:0050309)
0.1 0.4 GO:0008475 procollagen-lysine 5-dioxygenase activity(GO:0008475)
0.1 0.6 GO:0050786 RAGE receptor binding(GO:0050786)
0.1 0.5 GO:0009374 biotin binding(GO:0009374)
0.1 0.6 GO:0002162 dystroglycan binding(GO:0002162)
0.1 1.0 GO:0017166 vinculin binding(GO:0017166)
0.0 0.5 GO:0015279 store-operated calcium channel activity(GO:0015279)
0.0 0.1 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 3.7 GO:0003823 antigen binding(GO:0003823)
0.0 0.9 GO:0070330 aromatase activity(GO:0070330)
0.0 3.2 GO:0002020 protease binding(GO:0002020)
0.0 0.8 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 1.6 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.1 GO:0015501 glutamate:sodium symporter activity(GO:0015501)
0.0 0.6 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.0 0.3 GO:0004383 guanylate cyclase activity(GO:0004383)
0.0 0.8 GO:0001784 phosphotyrosine binding(GO:0001784)
0.0 0.2 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 2.2 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.8 PID CD40 PATHWAY CD40/CD40L signaling
0.0 0.6 NABA COLLAGENS Genes encoding collagen proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.2 REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
0.0 0.6 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.7 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.0 0.8 REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers
0.0 0.8 REACTOME RNA POL I PROMOTER OPENING Genes involved in RNA Polymerase I Promoter Opening
0.0 0.4 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.0 1.0 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.0 0.7 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport