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GSE58827: Dynamics of the Mouse Liver

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Results for Rxrb

Z-value: 0.49

Motif logo

Transcription factors associated with Rxrb

Gene Symbol Gene ID Gene Info
ENSMUSG00000039656.10 retinoid X receptor beta

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Rxrbmm10_v2_chr17_+_34031787_34031821-0.564.3e-04Click!

Activity profile of Rxrb motif

Sorted Z-values of Rxrb motif

Promoter Log-likelihood Transcript Gene Gene Info
chr14_+_52824340 2.46 ENSMUST00000103648.2
T cell receptor alpha variable 11D
chr2_+_102706356 2.17 ENSMUST00000123759.1
ENSMUST00000111212.1
ENSMUST00000005220.4
solute carrier family 1 (glial high affinity glutamate transporter), member 2
chr1_+_167618246 2.12 ENSMUST00000111380.1
retinoid X receptor gamma
chr12_-_113260217 1.63 ENSMUST00000178282.1
immunoglobulin heavy constant alpha
chr3_-_89393629 1.55 ENSMUST00000124783.1
ENSMUST00000126027.1
zinc finger and BTB domain containing 7B
chr8_-_67910911 1.42 ENSMUST00000093468.5
pleckstrin and Sec7 domain containing 3
chr1_-_180193653 1.42 ENSMUST00000159914.1
aarF domain containing kinase 3
chr2_+_72054598 1.39 ENSMUST00000028525.5
Rap guanine nucleotide exchange factor (GEF) 4
chr12_+_33314375 1.38 ENSMUST00000155386.1
ataxin 7-like 1
chr1_-_140183404 1.21 ENSMUST00000066859.6
ENSMUST00000111976.2
complement component factor h
chr15_+_76268076 1.17 ENSMUST00000074173.3
spermatogenesis and centriole associated 1
chr17_+_24878724 1.17 ENSMUST00000050714.6
insulin-like growth factor binding protein, acid labile subunit
chr1_-_140183283 1.15 ENSMUST00000111977.1
complement component factor h
chr14_-_118052235 1.12 ENSMUST00000022725.2
dopachrome tautomerase
chr7_-_141434402 1.06 ENSMUST00000136354.1
solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr7_-_141434532 0.98 ENSMUST00000133021.1
ENSMUST00000106007.3
ENSMUST00000150026.1
ENSMUST00000133206.2
solute carrier family 25 (mitochondrial carrier, glutamate), member 22
chr4_+_43632185 0.98 ENSMUST00000107874.2
natriuretic peptide receptor 2
chr7_-_105600103 0.89 ENSMUST00000033185.8
hemopexin
chr6_-_124863877 0.88 ENSMUST00000046893.7
G protein-coupled receptor 162
chr5_-_116422858 0.86 ENSMUST00000036991.4
heat shock protein 8
chr11_+_75193783 0.85 ENSMUST00000102514.3
reticulon 4 receptor-like 1
chr11_-_3722189 0.85 ENSMUST00000102950.3
ENSMUST00000101632.3
oxysterol binding protein 2
chr8_+_76899772 0.85 ENSMUST00000109913.2
nuclear receptor subfamily 3, group C, member 2
chr1_-_157108632 0.81 ENSMUST00000118207.1
ENSMUST00000027884.6
ENSMUST00000121911.1
testis expressed 35
chrX_-_100412587 0.81 ENSMUST00000033567.8
acyl-CoA wax alcohol acyltransferase 2
chr14_-_16243309 0.80 ENSMUST00000112625.1
3-oxoacyl-ACP synthase, mitochondrial
chr11_+_79660532 0.76 ENSMUST00000155381.1
RAB11 family interacting protein 4 (class II)
chr14_-_47189406 0.72 ENSMUST00000089959.6
GTP cyclohydrolase 1
chr16_+_31663841 0.72 ENSMUST00000115201.1
discs, large homolog 1 (Drosophila)
chr10_+_93641041 0.71 ENSMUST00000020204.4
netrin 4
chr4_+_136143497 0.67 ENSMUST00000008016.2
inhibitor of DNA binding 3
chr6_+_147531392 0.66 ENSMUST00000111614.2
coiled-coil domain containing 91
chr7_-_126922887 0.66 ENSMUST00000134134.1
ENSMUST00000119781.1
ENSMUST00000121612.2
transmembrane protein 219
chr16_-_23520579 0.64 ENSMUST00000089883.5
mannan-binding lectin serine peptidase 1
chr10_+_61720592 0.63 ENSMUST00000080099.5
apoptosis-inducing factor, mitochondrion-associated 2
chr11_-_50325599 0.62 ENSMUST00000179865.1
ENSMUST00000020637.8
calnexin
chr6_+_129533183 0.61 ENSMUST00000032264.6
gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
chr14_-_21741476 0.59 ENSMUST00000184703.1
ENSMUST00000183698.1
ENSMUST00000119866.2
dual specificity phosphatase 13
chr9_-_106891870 0.59 ENSMUST00000160503.1
ENSMUST00000159620.2
ENSMUST00000160978.1
mesencephalic astrocyte-derived neurotrophic factor
chrX_+_73716712 0.57 ENSMUST00000114461.2
ATP-binding cassette, sub-family D (ALD), member 1
chr16_+_31663935 0.56 ENSMUST00000100001.3
ENSMUST00000064477.7
discs, large homolog 1 (Drosophila)
chr6_+_90302083 0.56 ENSMUST00000167550.2
cDNA sequence BC048671
chr5_+_119834663 0.55 ENSMUST00000018407.6
T-box 5
chr12_+_33314277 0.52 ENSMUST00000133549.1
ataxin 7-like 1
chrX_+_73716577 0.50 ENSMUST00000002084.7
ATP-binding cassette, sub-family D (ALD), member 1
chrX_+_101376359 0.50 ENSMUST00000119080.1
gap junction protein, beta 1
chr4_-_20778852 0.49 ENSMUST00000102998.3
Na+/K+ transporting ATPase interacting 3
chr10_-_17947997 0.49 ENSMUST00000037879.6
headcase homolog (Drosophila)
chr16_+_24721842 0.48 ENSMUST00000115314.2
LIM domain containing preferred translocation partner in lipoma
chr2_-_6212979 0.48 ENSMUST00000114941.1
enoyl Coenzyme A hydratase domain containing 3
chr6_-_29380426 0.47 ENSMUST00000147483.2
opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr2_-_6213033 0.46 ENSMUST00000042658.2
enoyl Coenzyme A hydratase domain containing 3
chr5_+_72914554 0.45 ENSMUST00000143829.1
SLAIN motif family, member 2
chr16_-_30388530 0.45 ENSMUST00000100013.2
ENSMUST00000061350.6
ATPase type 13A3
chr5_+_91139591 0.45 ENSMUST00000031325.4
amphiregulin
chr3_-_94786430 0.44 ENSMUST00000107272.1
cingulin
chr8_+_105708270 0.44 ENSMUST00000013302.5
RIKEN cDNA 4933405L10 gene
chr9_+_55208925 0.44 ENSMUST00000034859.8
F-box protein 22
chr5_-_74702891 0.42 ENSMUST00000117388.1
ligand of numb-protein X 1
chr17_-_27820445 0.41 ENSMUST00000114859.1
DNA segment, Chr 17, Wayne State University 92, expressed
chr7_-_31055594 0.41 ENSMUST00000039909.6
FXYD domain-containing ion transport regulator 1
chr16_+_10545390 0.41 ENSMUST00000115827.1
ENSMUST00000038145.6
ENSMUST00000150894.1
C-type lectin domain family 16, member A
chr3_+_90062781 0.40 ENSMUST00000029551.2
RIKEN cDNA 1700094D03 gene
chr6_-_113531575 0.40 ENSMUST00000032425.5
ER membrane protein complex subunit 3
chr12_-_98737405 0.40 ENSMUST00000170188.1
protein tyrosine phosphatase, non-receptor type 21
chr17_-_27820534 0.40 ENSMUST00000075076.4
ENSMUST00000114863.2
DNA segment, Chr 17, Wayne State University 92, expressed
chr6_-_124965403 0.39 ENSMUST00000129446.1
ENSMUST00000032220.8
COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)
chr5_-_123666682 0.39 ENSMUST00000149410.1
CAP-GLY domain containing linker protein 1
chr11_-_53430779 0.37 ENSMUST00000061326.4
ENSMUST00000109021.3
ubiquinol-cytochrome c reductase, complex III subunit VII
chr11_+_40733639 0.37 ENSMUST00000020578.4
NudC domain containing 2
chr5_-_24995748 0.36 ENSMUST00000076306.5
protein kinase, AMP-activated, gamma 2 non-catalytic subunit
chr11_+_101070012 0.36 ENSMUST00000001802.9
alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
chr12_-_111712946 0.36 ENSMUST00000160825.1
ENSMUST00000162953.1
BCL2-associated athanogene 5
chr1_+_84839833 0.36 ENSMUST00000097672.3
F-box protein 36
chr3_-_94786469 0.35 ENSMUST00000107273.1
cingulin
chr19_+_42052228 0.35 ENSMUST00000164518.2
RIKEN cDNA 4933411K16 gene
chr14_+_21500879 0.34 ENSMUST00000182964.1
K(lysine) acetyltransferase 6B
chr16_+_10545339 0.34 ENSMUST00000066345.7
ENSMUST00000115824.3
ENSMUST00000155633.1
C-type lectin domain family 16, member A
chr10_-_128821576 0.34 ENSMUST00000026409.3
ORM1-like 2 (S. cerevisiae)
chr6_-_124965248 0.34 ENSMUST00000129976.1
COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)
chr11_-_97629685 0.34 ENSMUST00000052281.4
RIKEN cDNA E130012A19 gene
chr6_-_124965207 0.34 ENSMUST00000148485.1
COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)
chr6_+_22288221 0.33 ENSMUST00000128245.1
ENSMUST00000031681.3
ENSMUST00000148639.1
wingless-related MMTV integration site 16
chr13_+_46669517 0.33 ENSMUST00000099547.3
expressed sequence C78339
chr5_+_121795034 0.32 ENSMUST00000162327.1
ataxin 2
chr1_-_191164815 0.32 ENSMUST00000171798.1
family with sequence similarity 71, member A
chr15_-_82354280 0.32 ENSMUST00000023085.5
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)
chr2_-_122313644 0.32 ENSMUST00000147788.1
ENSMUST00000154412.1
ENSMUST00000110537.1
ENSMUST00000148417.1
dual oxidase maturation factor 1
chr9_-_50659780 0.32 ENSMUST00000034567.3
dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
chr19_-_37176055 0.31 ENSMUST00000142973.1
ENSMUST00000154376.1
cytoplasmic polyadenylation element binding protein 3
chr12_+_119945957 0.31 ENSMUST00000058644.8
transmembrane protein 196
chr11_-_99620432 0.31 ENSMUST00000073853.2
predicted gene 11562
chr17_+_28177339 0.30 ENSMUST00000073534.2
ENSMUST00000002318.1
zinc finger protein 523
chr6_-_88446491 0.30 ENSMUST00000165242.1
eukaryotic elongation factor, selenocysteine-tRNA-specific
chr15_-_101562889 0.29 ENSMUST00000023714.4
RIKEN cDNA 4732456N10 gene
chr7_+_45514581 0.29 ENSMUST00000151506.1
ENSMUST00000085331.5
ENSMUST00000126061.1
tubby-like protein 2
chr6_-_29380513 0.29 ENSMUST00000080428.6
opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
chr19_+_11770415 0.28 ENSMUST00000167199.1
mitochondrial ribosomal protein L16
chr11_+_40733936 0.27 ENSMUST00000127382.1
NudC domain containing 2
chr7_-_120095177 0.27 ENSMUST00000046993.3
dynein, axonemal, heavy chain 3
chr12_+_108792946 0.27 ENSMUST00000021692.7
YY1 transcription factor
chr7_+_138846579 0.27 ENSMUST00000155672.1
protein phosphatase 2, regulatory subunit B, delta isoform
chr4_-_139968026 0.26 ENSMUST00000105031.2
kelch domain containing 7A
chr7_-_35802968 0.25 ENSMUST00000061586.4
zinc finger protein 507
chr6_-_124965485 0.25 ENSMUST00000112439.2
COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)
chr18_-_80713062 0.25 ENSMUST00000170905.1
ENSMUST00000078049.4
nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
chr4_+_57845240 0.24 ENSMUST00000102903.1
ENSMUST00000107598.3
A kinase (PRKA) anchor protein 2
chr5_+_72914264 0.24 ENSMUST00000144843.1
SLAIN motif family, member 2
chr2_+_173659834 0.24 ENSMUST00000109110.3
RAB22A, member RAS oncogene family
chr11_-_106973090 0.23 ENSMUST00000150366.1
predicted gene 11707
chr15_+_38219203 0.23 ENSMUST00000081966.4
outer dense fiber of sperm tails 1
chr12_-_111712909 0.23 ENSMUST00000160576.1
BCL2-associated athanogene 5
chr7_-_4778141 0.22 ENSMUST00000094892.5
interleukin 11
chr17_-_67632707 0.21 ENSMUST00000097290.2
leucine rich repeat containing 30
chr1_+_160044374 0.21 ENSMUST00000163892.1
RIKEN cDNA 4930523C07 gene
chr4_-_58912678 0.21 ENSMUST00000144512.1
ENSMUST00000102889.3
ENSMUST00000055822.8
expressed sequence AI314180
chr19_-_6980420 0.21 ENSMUST00000070878.8
ENSMUST00000177752.1
FK506 binding protein 2
chr1_+_6487231 0.21 ENSMUST00000140079.1
ENSMUST00000131494.1
suppression of tumorigenicity 18
chr7_+_102229999 0.20 ENSMUST00000120119.1
post-GPI attachment to proteins 2
chr16_-_10790902 0.20 ENSMUST00000050864.5
protamine 3
chr7_-_4771262 0.20 ENSMUST00000108580.2
family with sequence similarity 71, member E2
chr16_-_44333135 0.20 ENSMUST00000047446.6
SID1 transmembrane family, member 1
chr5_+_3803160 0.19 ENSMUST00000171023.1
ENSMUST00000080085.4
KRIT1, ankyrin repeat containing
chr3_-_89773221 0.19 ENSMUST00000038450.1
RIKEN cDNA 4632404H12 gene
chr7_-_4771279 0.19 ENSMUST00000174409.1
family with sequence similarity 71, member E2
chr1_-_9631092 0.18 ENSMUST00000115480.1
RIKEN cDNA 2610203C22 gene
chr4_-_45532470 0.17 ENSMUST00000147448.1
src homology 2 domain-containing transforming protein B
chr7_+_138846335 0.17 ENSMUST00000041097.6
protein phosphatase 2, regulatory subunit B, delta isoform
chr6_+_96115249 0.17 ENSMUST00000075080.5
family with sequence similarity 19, member A1
chr12_-_111713185 0.17 ENSMUST00000054636.6
BCL2-associated athanogene 5
chr11_+_104186327 0.17 ENSMUST00000107000.1
ENSMUST00000059448.7
signal peptide peptidase 2C
chr1_+_160044564 0.17 ENSMUST00000168359.1
RIKEN cDNA 4930523C07 gene
chr2_-_119662756 0.16 ENSMUST00000028768.1
ENSMUST00000110801.1
ENSMUST00000110802.1
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
chr4_-_20778527 0.16 ENSMUST00000119374.1
Na+/K+ transporting ATPase interacting 3
chr5_+_25516061 0.16 ENSMUST00000045016.7
chaperonin containing TCP1, subunit 8 (theta)-like 1
chr1_+_131688766 0.16 ENSMUST00000129905.1
RIKEN cDNA 5430435G22 gene
chr4_+_150997081 0.16 ENSMUST00000030803.1
urotensin 2
chr12_+_86241848 0.16 ENSMUST00000071106.4
G patch domain containing 2 like
chr12_+_111713255 0.15 ENSMUST00000040519.5
ENSMUST00000160366.1
ENSMUST00000163220.2
ENSMUST00000162316.1
apoptogenic, mitochondrial 1
chr13_-_54688246 0.15 ENSMUST00000122935.1
ENSMUST00000128257.1
ring finger protein 44
chr7_-_104129792 0.14 ENSMUST00000053743.4
RIKEN cDNA 4931431F19 gene
chr2_-_151092350 0.14 ENSMUST00000109890.1
predicted gene 14151
chr13_+_55209776 0.14 ENSMUST00000099490.2
nuclear receptor-binding SET-domain protein 1
chr1_-_171531660 0.13 ENSMUST00000168184.1
intelectin 1 (galactofuranose binding)
chrX_-_23365044 0.13 ENSMUST00000115313.1
kelch-like 13
chr3_+_98160812 0.13 ENSMUST00000050342.3
a disintegrin and metallopeptidase domain 30
chr17_+_28575718 0.13 ENSMUST00000080780.6
lipoma HMGIC fusion partner-like 5
chr11_+_117484368 0.13 ENSMUST00000092394.3
predicted gene 11733
chr8_+_109493982 0.12 ENSMUST00000034162.6
polyamine modulated factor 1 binding protein 1
chrX_+_86191764 0.12 ENSMUST00000026036.4
nuclear receptor subfamily 0, group B, member 1
chr6_+_90269106 0.12 ENSMUST00000058039.2
vomeronasal 1 receptor 54
chr13_-_55415166 0.11 ENSMUST00000054146.3
profilin 3
chr2_-_6721606 0.11 ENSMUST00000150624.2
ENSMUST00000142941.1
ENSMUST00000100429.4
ENSMUST00000182879.1
CUGBP, Elav-like family member 2
chr16_-_44332925 0.11 ENSMUST00000136381.1
SID1 transmembrane family, member 1
chr9_-_77251871 0.11 ENSMUST00000183955.1
muscular LMNA-interacting protein
chr2_+_173659760 0.10 ENSMUST00000029024.3
RAB22A, member RAS oncogene family
chr18_+_57142782 0.10 ENSMUST00000139892.1
multiple EGF-like-domains 10
chr13_-_54688264 0.10 ENSMUST00000150626.1
ENSMUST00000134177.1
ring finger protein 44
chr2_+_121449362 0.10 ENSMUST00000110615.1
ENSMUST00000099475.5
small EDRK-rich factor 2
chr1_+_86022105 0.10 ENSMUST00000131151.2
spermatogenesis associated 3
chr4_+_42969945 0.09 ENSMUST00000030163.5
RIKEN cDNA 1700022I11 gene
chr3_+_94837533 0.09 ENSMUST00000107270.2
pogo transposable element with ZNF domain
chr6_+_71543900 0.08 ENSMUST00000065364.2
charged multivesicular body protein 3
chr10_+_80148263 0.08 ENSMUST00000099492.3
ENSMUST00000042057.5
midnolin
chr2_+_118900377 0.08 ENSMUST00000151162.1
bromo adjacent homology domain containing 1
chr2_-_119477613 0.08 ENSMUST00000110808.1
ENSMUST00000049920.7
INO80 homolog (S. cerevisiae)
chr15_+_92161343 0.08 ENSMUST00000068378.5
contactin 1
chr4_+_148000722 0.07 ENSMUST00000103230.4
natriuretic peptide type A
chr6_+_71543797 0.07 ENSMUST00000059462.5
charged multivesicular body protein 3
chr11_-_95699143 0.07 ENSMUST00000062249.2
predicted gene 9796
chr2_-_153871076 0.07 ENSMUST00000028982.4
Sad1 and UNC84 domain containing 5
chr1_+_175698586 0.07 ENSMUST00000171939.1
ENSMUST00000094288.4
WD repeat domain 64
chr9_-_77251829 0.05 ENSMUST00000184322.1
ENSMUST00000184316.1
muscular LMNA-interacting protein
chr6_+_119236507 0.04 ENSMUST00000037434.6
calcium channel, voltage-dependent, alpha 2/delta subunit 4
chr1_+_86021959 0.04 ENSMUST00000159876.1
ENSMUST00000135440.1
spermatogenesis associated 3
chr17_-_75551838 0.04 ENSMUST00000112507.3
family with sequence similarity 98, member A
chr10_+_81136223 0.04 ENSMUST00000048128.8
zinc finger and BTB domain containing 7a
chr7_+_19212521 0.03 ENSMUST00000060225.4
G protein-coupled receptor 4
chr15_+_78430086 0.02 ENSMUST00000162808.1
potassium channel tetramerisation domain containing 17
chrX_-_112406779 0.02 ENSMUST00000026601.2
spermidine/spermine N1-acetyl transferase-like 1
chr11_+_97315716 0.01 ENSMUST00000019026.3
ENSMUST00000132168.1
mitochondrial ribosomal protein L45
chr7_-_134364859 0.01 ENSMUST00000172947.1
DNA segment, Chr 7, ERATO Doi 443, expressed
chrX_+_99042581 0.01 ENSMUST00000036606.7
START domain containing 8
chr1_+_131688670 0.00 ENSMUST00000064679.2
ENSMUST00000064664.3
ENSMUST00000136247.1
RIKEN cDNA 5430435G22 gene

Network of associatons between targets according to the STRING database.

First level regulatory network of Rxrb

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.5 GO:0043376 regulation of CD8-positive, alpha-beta T cell differentiation(GO:0043376)
0.4 1.1 GO:0006583 melanin biosynthetic process from tyrosine(GO:0006583)
0.4 1.1 GO:0015910 peroxisomal long-chain fatty acid import(GO:0015910)
0.3 1.4 GO:1904457 positive regulation of neuronal action potential(GO:1904457)
0.3 1.3 GO:1903760 regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization(GO:1903760)
0.3 2.2 GO:0070779 D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779)
0.3 0.8 GO:0031959 mineralocorticoid receptor signaling pathway(GO:0031959)
0.3 2.4 GO:0045919 positive regulation of cytolysis(GO:0045919)
0.2 0.6 GO:0002014 vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure(GO:0002014)
0.2 0.5 GO:0003218 cardiac left ventricle formation(GO:0003218)
0.2 0.7 GO:0014916 regulation of lung blood pressure(GO:0014916)
0.2 0.9 GO:0015886 heme transport(GO:0015886)
0.1 0.7 GO:1901097 negative regulation of autophagosome maturation(GO:1901097)
0.1 0.7 GO:0035426 extracellular matrix-cell signaling(GO:0035426)
0.1 0.8 GO:0010025 wax biosynthetic process(GO:0010025) wax metabolic process(GO:0010166)
0.1 0.8 GO:0051790 short-chain fatty acid biosynthetic process(GO:0051790)
0.1 1.2 GO:1900194 negative regulation of oocyte maturation(GO:1900194)
0.1 0.3 GO:1900060 negative regulation of ceramide biosynthetic process(GO:1900060)
0.1 0.4 GO:0060598 dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis(GO:0060598)
0.1 0.3 GO:1900247 cytoplasmic translational elongation(GO:0002182) regulation of cytoplasmic translational elongation(GO:1900247) negative regulation of cytoplasmic translational elongation(GO:1900248)
0.1 0.4 GO:0044861 protein transport into plasma membrane raft(GO:0044861)
0.1 0.8 GO:0070314 G1 to G0 transition(GO:0070314)
0.1 0.8 GO:0061084 negative regulation of protein refolding(GO:0061084)
0.1 0.3 GO:0071707 immunoglobulin heavy chain V-D-J recombination(GO:0071707)
0.1 2.0 GO:0015813 L-glutamate transport(GO:0015813)
0.1 0.3 GO:0097494 regulation of vesicle size(GO:0097494)
0.1 0.2 GO:0060854 patterning of lymph vessels(GO:0060854)
0.1 0.7 GO:0090160 Golgi to lysosome transport(GO:0090160)
0.1 1.3 GO:0000338 protein deneddylation(GO:0000338)
0.1 0.8 GO:0018298 protein-chromophore linkage(GO:0018298)
0.1 0.4 GO:1903275 positive regulation of sodium ion export(GO:1903275) positive regulation of sodium ion export from cell(GO:1903278)
0.1 0.3 GO:0090403 oxidative stress-induced premature senescence(GO:0090403)
0.1 0.6 GO:0001867 complement activation, lectin pathway(GO:0001867)
0.1 0.9 GO:0048681 negative regulation of axon regeneration(GO:0048681)
0.1 0.4 GO:0021539 subthalamus development(GO:0021539)
0.1 0.2 GO:0046005 positive regulation of circadian sleep/wake cycle, REM sleep(GO:0046005)
0.1 2.1 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.1 0.2 GO:0061763 multivesicular body-lysosome fusion(GO:0061763)
0.1 0.6 GO:0006995 cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562)
0.0 0.4 GO:0034975 protein folding in endoplasmic reticulum(GO:0034975)
0.0 1.4 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.5 GO:0015868 purine ribonucleotide transport(GO:0015868)
0.0 0.3 GO:0061732 mitochondrial acetyl-CoA biosynthetic process from pyruvate(GO:0061732)
0.0 1.7 GO:0006910 phagocytosis, recognition(GO:0006910)
0.0 0.3 GO:0006451 selenocysteine incorporation(GO:0001514) translational readthrough(GO:0006451)
0.0 0.3 GO:0033227 dsRNA transport(GO:0033227)
0.0 0.3 GO:2000609 regulation of thyroid hormone generation(GO:2000609)
0.0 0.4 GO:0048742 regulation of skeletal muscle fiber development(GO:0048742)
0.0 0.1 GO:1903764 regulation of potassium ion export across plasma membrane(GO:1903764)
0.0 0.4 GO:0070262 peptidyl-serine dephosphorylation(GO:0070262)
0.0 0.1 GO:0009624 response to nematode(GO:0009624)
0.0 0.7 GO:0007020 microtubule nucleation(GO:0007020)
0.0 0.1 GO:0000414 regulation of histone H3-K36 methylation(GO:0000414)
0.0 0.4 GO:0046548 retinal rod cell development(GO:0046548)
0.0 0.7 GO:0030903 notochord development(GO:0030903)
0.0 0.3 GO:0036159 inner dynein arm assembly(GO:0036159)
0.0 0.3 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.8 GO:0070830 bicellular tight junction assembly(GO:0070830)
0.0 0.1 GO:0033132 negative regulation of glucokinase activity(GO:0033132) negative regulation of hexokinase activity(GO:1903300)
0.0 0.2 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.2 GO:0034393 positive regulation of smooth muscle cell apoptotic process(GO:0034393)
0.0 0.1 GO:0035902 response to immobilization stress(GO:0035902)
0.0 1.0 GO:0061077 chaperone-mediated protein folding(GO:0061077)
0.0 0.2 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.0 0.0 GO:0072144 glomerular mesangial cell differentiation(GO:0072008) glomerular mesangial cell development(GO:0072144)
0.0 0.2 GO:0070102 interleukin-6-mediated signaling pathway(GO:0070102)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 GO:0044316 cone cell pedicle(GO:0044316)
0.2 0.7 GO:0036019 endolysosome(GO:0036019)
0.2 1.3 GO:0097025 MPP7-DLG1-LIN7 complex(GO:0097025)
0.1 1.2 GO:0042567 insulin-like growth factor ternary complex(GO:0042567)
0.1 0.3 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 1.6 GO:0042571 immunoglobulin complex, circulating(GO:0042571)
0.1 0.3 GO:0035339 SPOTS complex(GO:0035339)
0.1 0.6 GO:0044233 ER-mitochondrion membrane contact site(GO:0044233)
0.1 0.4 GO:0044352 pinosome(GO:0044352) macropinosome(GO:0044354)
0.1 2.2 GO:0030673 axolemma(GO:0030673)
0.0 2.2 GO:0032154 cleavage furrow(GO:0032154) cell surface furrow(GO:0097610)
0.0 1.0 GO:0008074 guanylate cyclase complex, soluble(GO:0008074)
0.0 0.4 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750)
0.0 1.1 GO:0005779 integral component of peroxisomal membrane(GO:0005779)
0.0 1.1 GO:0042470 melanosome(GO:0042470) pigment granule(GO:0048770)
0.0 0.4 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.2 GO:0071556 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553)
0.0 0.8 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.6 GO:0000421 autophagosome membrane(GO:0000421)
0.0 1.2 GO:0097440 apical dendrite(GO:0097440)
0.0 1.2 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.3 GO:0036156 inner dynein arm(GO:0036156)
0.0 3.3 GO:0072562 blood microparticle(GO:0072562)
0.0 0.3 GO:0031011 Ino80 complex(GO:0031011)
0.0 0.5 GO:0005922 connexon complex(GO:0005922)
0.0 0.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.2 GO:0001520 outer dense fiber(GO:0001520)
0.0 0.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.2 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.4 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.2 GO:0005832 chaperonin-containing T-complex(GO:0005832)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.2 GO:0015501 glutamate:sodium symporter activity(GO:0015501)
0.3 2.4 GO:0001851 complement component C3b binding(GO:0001851)
0.3 2.0 GO:0005314 high-affinity glutamate transmembrane transporter activity(GO:0005314)
0.3 0.8 GO:0017082 mineralocorticoid receptor activity(GO:0017082)
0.3 0.8 GO:0050252 retinol O-fatty-acyltransferase activity(GO:0050252)
0.2 0.9 GO:0015232 heme transporter activity(GO:0015232)
0.2 1.3 GO:0097016 L27 domain binding(GO:0097016)
0.2 2.1 GO:0004886 9-cis retinoic acid receptor activity(GO:0004886)
0.2 0.8 GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity(GO:0004315)
0.2 1.0 GO:0016941 natriuretic peptide receptor activity(GO:0016941)
0.2 1.1 GO:0005324 long-chain fatty acid transporter activity(GO:0005324)
0.1 0.6 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.1 0.7 GO:0019238 cyclohydrolase activity(GO:0019238)
0.1 0.8 GO:0008020 G-protein coupled photoreceptor activity(GO:0008020)
0.1 0.9 GO:0035374 chondroitin sulfate binding(GO:0035374)
0.1 0.2 GO:0001225 RNA polymerase II transcription coactivator binding(GO:0001225)
0.1 0.8 GO:0030306 ADP-ribosylation factor binding(GO:0030306)
0.1 1.6 GO:0034987 immunoglobulin receptor binding(GO:0034987)
0.1 0.3 GO:0034603 pyruvate dehydrogenase activity(GO:0004738) pyruvate dehydrogenase [NAD(P)+] activity(GO:0034603) pyruvate dehydrogenase (NAD+) activity(GO:0034604)
0.1 1.1 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.1 0.3 GO:0051033 nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.1 0.4 GO:0008607 phosphorylase kinase regulator activity(GO:0008607)
0.0 0.4 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 1.4 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.6 GO:0030957 Tat protein binding(GO:0030957)
0.0 0.3 GO:0035368 selenocysteine insertion sequence binding(GO:0035368)
0.0 1.2 GO:0005520 insulin-like growth factor binding(GO:0005520)
0.0 1.2 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.5 GO:0005243 gap junction channel activity(GO:0005243)
0.0 1.4 GO:0030552 cAMP binding(GO:0030552)
0.0 0.1 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 0.6 GO:0034185 apolipoprotein binding(GO:0034185)
0.0 0.3 GO:0050692 DBD domain binding(GO:0050692)
0.0 0.3 GO:0035925 mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.0 0.4 GO:0015929 hexosaminidase activity(GO:0015929)
0.0 0.4 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.1 GO:0001849 complement component C1q binding(GO:0001849)
0.0 0.4 GO:0000217 DNA secondary structure binding(GO:0000217)
0.0 0.9 GO:0015485 cholesterol binding(GO:0015485)
0.0 0.7 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.1 GO:0070492 oligosaccharide binding(GO:0070492)
0.0 0.4 GO:0005154 epidermal growth factor receptor binding(GO:0005154)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 2.1 PID RXR VDR PATHWAY RXR and RAR heterodimerization with other nuclear receptor
0.0 0.4 PID ERBB NETWORK PATHWAY ErbB receptor signaling network
0.0 1.3 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.7 NABA BASEMENT MEMBRANES Genes encoding structural components of basement membranes
0.0 0.4 PID LIS1 PATHWAY Lissencephaly gene (LIS1) in neuronal migration and development
0.0 0.5 PID ECADHERIN STABILIZATION PATHWAY Stabilization and expansion of the E-cadherin adherens junction

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.4 REACTOME REGULATION OF COMPLEMENT CASCADE Genes involved in Regulation of Complement cascade
0.1 0.8 REACTOME OPSINS Genes involved in Opsins
0.1 0.6 REACTOME CREATION OF C4 AND C2 ACTIVATORS Genes involved in Creation of C4 and C2 activators
0.1 1.3 REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS Genes involved in Ionotropic activity of Kainate Receptors
0.1 1.2 REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs)
0.1 0.6 REACTOME CALNEXIN CALRETICULIN CYCLE Genes involved in Calnexin/calreticulin cycle
0.0 1.1 REACTOME ALPHA LINOLENIC ACID ALA METABOLISM Genes involved in alpha-linolenic acid (ALA) metabolism
0.0 0.7 REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
0.0 3.1 REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY Genes involved in Nuclear Receptor transcription pathway
0.0 2.2 REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS Genes involved in Amino acid and oligopeptide SLC transporters
0.0 1.4 REACTOME INTEGRIN ALPHAIIB BETA3 SIGNALING Genes involved in Integrin alphaIIb beta3 signaling
0.0 0.5 REACTOME GAP JUNCTION ASSEMBLY Genes involved in Gap junction assembly
0.0 0.3 REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex
0.0 0.4 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.0 0.6 REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.0 0.4 REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)