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avrg: GSE58827: Dynamics of the Mouse Liver

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Results for AUGUGCC

Z-value: 0.23

Motif logo

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miRNA associated with seed AUGUGCC

NamemiRBASE accession
mmu-miR-455-5p
MIMAT0003485
mmu-miR-5129-3p
MIMAT0022987

Activity profile of AUGUGCC motif

Sorted Z-values of AUGUGCC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_75046639 0.15 ENSMUST00000152855.1
Nhej1
nonhomologous end-joining factor 1
chr1_+_160906372 0.14 ENSMUST00000161609.1
Rc3h1
RING CCCH (C3H) domains 1
chr10_-_45470201 0.13 ENSMUST00000079390.6
Lin28b
lin-28 homolog B (C. elegans)
chr14_-_61439831 0.12 ENSMUST00000022496.7
Kpna3
karyopherin (importin) alpha 3
chr17_-_74294834 0.12 ENSMUST00000078459.6
Memo1
mediator of cell motility 1
chr4_+_13743424 0.10 ENSMUST00000006761.3
Runx1t1
runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr11_+_79993062 0.10 ENSMUST00000017692.8
ENSMUST00000163272.1
Suz12
suppressor of zeste 12 homolog (Drosophila)
chr18_-_77565050 0.09 ENSMUST00000182153.1
ENSMUST00000182146.1
ENSMUST00000026494.7
ENSMUST00000182024.1
Rnf165
ring finger protein 165
chr5_+_124540695 0.09 ENSMUST00000060226.4
Tmed2
transmembrane emp24 domain trafficking protein 2
chr11_-_95842409 0.09 ENSMUST00000059026.3
Abi3
ABI gene family, member 3
chr18_+_6765171 0.09 ENSMUST00000097680.5
Rab18
RAB18, member RAS oncogene family
chr15_+_80711292 0.09 ENSMUST00000067689.7
Tnrc6b
trinucleotide repeat containing 6b
chr19_+_21272276 0.08 ENSMUST00000025659.4
Zfand5
zinc finger, AN1-type domain 5
chr14_-_121379206 0.07 ENSMUST00000079817.7
Stk24
serine/threonine kinase 24
chr13_+_106947104 0.07 ENSMUST00000022203.8
Dimt1
DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
chr9_-_103364970 0.07 ENSMUST00000116517.2
Cdv3
carnitine deficiency-associated gene expressed in ventricle 3
chr5_+_65537209 0.07 ENSMUST00000142407.1
Ube2k
ubiquitin-conjugating enzyme E2K
chr3_+_103279293 0.06 ENSMUST00000029444.6
ENSMUST00000106860.1
Trim33
tripartite motif-containing 33
chr11_-_117969176 0.06 ENSMUST00000054002.3
Socs3
suppressor of cytokine signaling 3
chr5_+_108065742 0.06 ENSMUST00000081567.4
ENSMUST00000170319.1
ENSMUST00000112626.1
Mtf2
metal response element binding transcription factor 2
chr7_-_34654342 0.06 ENSMUST00000108069.1
Kctd15
potassium channel tetramerisation domain containing 15
chr13_-_81710937 0.05 ENSMUST00000161920.1
ENSMUST00000048993.5
Polr3g
polymerase (RNA) III (DNA directed) polypeptide G
chr11_-_50238451 0.05 ENSMUST00000101265.2
Ltc4s
leukotriene C4 synthase
chrX_+_18162575 0.05 ENSMUST00000044484.6
ENSMUST00000052368.8
Kdm6a
lysine (K)-specific demethylase 6A
chr13_-_100833369 0.05 ENSMUST00000067246.4
Slc30a5
solute carrier family 30 (zinc transporter), member 5
chr15_+_79670856 0.05 ENSMUST00000023062.3
Tomm22
translocase of outer mitochondrial membrane 22 homolog (yeast)
chr7_+_110018301 0.05 ENSMUST00000084731.3
Ipo7
importin 7
chr10_+_34483400 0.05 ENSMUST00000019913.7
ENSMUST00000170771.1
Frk
fyn-related kinase
chr13_+_93308006 0.05 ENSMUST00000079086.6
Homer1
homer homolog 1 (Drosophila)
chr16_-_30388530 0.05 ENSMUST00000100013.2
ENSMUST00000061350.6
Atp13a3
ATPase type 13A3
chr16_+_49855618 0.05 ENSMUST00000084838.6
Cd47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
chr18_+_67933257 0.04 ENSMUST00000063775.3
Ldlrad4
low density lipoprotein receptor class A domain containing 4
chr3_-_58525867 0.04 ENSMUST00000029385.7
Serp1
stress-associated endoplasmic reticulum protein 1
chr8_+_76899772 0.04 ENSMUST00000109913.2
Nr3c2
nuclear receptor subfamily 3, group C, member 2
chr8_+_46739745 0.04 ENSMUST00000034041.7
Irf2
interferon regulatory factor 2
chr11_-_86807624 0.04 ENSMUST00000018569.7
Dhx40
DEAH (Asp-Glu-Ala-His) box polypeptide 40
chrX_+_13071500 0.04 ENSMUST00000089302.4
Usp9x
ubiquitin specific peptidase 9, X chromosome
chr9_+_72532214 0.04 ENSMUST00000163401.2
ENSMUST00000093820.3
Rfx7
regulatory factor X, 7
chr2_-_57114970 0.04 ENSMUST00000028166.2
Nr4a2
nuclear receptor subfamily 4, group A, member 2
chrX_+_13280970 0.04 ENSMUST00000000804.6
Ddx3x
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
chr5_+_14514918 0.04 ENSMUST00000030691.10
ENSMUST00000182407.1
Pclo
piccolo (presynaptic cytomatrix protein)
chrX_+_66649318 0.04 ENSMUST00000166241.1
Slitrk2
SLIT and NTRK-like family, member 2
chr5_-_145140238 0.04 ENSMUST00000031627.8
Pdap1
PDGFA associated protein 1
chr3_+_22076644 0.04 ENSMUST00000063988.8
Tbl1xr1
transducin (beta)-like 1X-linked receptor 1
chr11_-_102185202 0.04 ENSMUST00000107156.2
Lsm12
LSM12 homolog (S. cerevisiae)
chr5_-_67427794 0.03 ENSMUST00000169190.1
Bend4
BEN domain containing 4
chr5_+_122850186 0.03 ENSMUST00000031434.6
Rnf34
ring finger protein 34
chr5_+_67260565 0.03 ENSMUST00000037918.5
ENSMUST00000162543.1
Tmem33
transmembrane protein 33
chr2_+_54436317 0.03 ENSMUST00000112636.1
ENSMUST00000112635.1
ENSMUST00000112634.1
Galnt13
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13
chr6_+_134920401 0.03 ENSMUST00000067327.4
ENSMUST00000003115.6
Cdkn1b
cyclin-dependent kinase inhibitor 1B
chr9_-_70503718 0.03 ENSMUST00000034739.5
Rnf111
ring finger 111
chr17_-_35838259 0.03 ENSMUST00000001566.8
Tubb5
tubulin, beta 5 class I
chr13_-_51567084 0.03 ENSMUST00000021898.5
Shc3
src homology 2 domain-containing transforming protein C3
chr2_-_69586021 0.03 ENSMUST00000100051.2
ENSMUST00000092551.4
ENSMUST00000080953.5
Lrp2
low density lipoprotein receptor-related protein 2
chr6_-_119417479 0.03 ENSMUST00000032272.6
Adipor2
adiponectin receptor 2
chr3_+_158036662 0.03 ENSMUST00000072080.3
Lrrc40
leucine rich repeat containing 40
chr8_-_57653023 0.03 ENSMUST00000034021.5
Galnt7
UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
chr18_+_38418946 0.02 ENSMUST00000025293.3
Ndfip1
Nedd4 family interacting protein 1
chr9_-_66593106 0.02 ENSMUST00000127569.1
Usp3
ubiquitin specific peptidase 3
chr8_-_104443001 0.02 ENSMUST00000041769.6
Dync1li2
dynein, cytoplasmic 1 light intermediate chain 2
chr11_+_75630974 0.02 ENSMUST00000006286.2
Inpp5k
inositol polyphosphate 5-phosphatase K
chr14_+_111675113 0.02 ENSMUST00000042767.7
Slitrk5
SLIT and NTRK-like family, member 5
chr3_-_9833653 0.02 ENSMUST00000161949.1
Pag1
phosphoprotein associated with glycosphingolipid microdomains 1
chr4_+_15881255 0.02 ENSMUST00000029876.1
Calb1
calbindin 1
chr9_+_57910974 0.02 ENSMUST00000163329.1
Ubl7
ubiquitin-like 7 (bone marrow stromal cell-derived)
chr19_+_53140430 0.02 ENSMUST00000111741.2
Add3
adducin 3 (gamma)
chr11_+_69991061 0.02 ENSMUST00000018711.8
Gabarap
gamma-aminobutyric acid receptor associated protein
chr19_+_23723279 0.02 ENSMUST00000067077.1
Gm9938
predicted gene 9938
chr11_-_94321957 0.02 ENSMUST00000166312.1
ENSMUST00000107821.2
ENSMUST00000021226.7
ENSMUST00000107820.1
Luc7l3
LUC7-like 3 (S. cerevisiae)
chr2_-_60125651 0.02 ENSMUST00000112550.1
Baz2b
bromodomain adjacent to zinc finger domain, 2B
chr5_+_129941949 0.01 ENSMUST00000051758.7
ENSMUST00000073945.4
Vkorc1l1
vitamin K epoxide reductase complex, subunit 1-like 1
chr18_+_34777008 0.01 ENSMUST00000043775.7
Kdm3b
KDM3B lysine (K)-specific demethylase 3B
chr1_+_43445736 0.01 ENSMUST00000086421.5
ENSMUST00000114744.1
Nck2
non-catalytic region of tyrosine kinase adaptor protein 2
chr5_+_135187251 0.01 ENSMUST00000002825.5
Baz1b
bromodomain adjacent to zinc finger domain, 1B
chr7_+_35586232 0.01 ENSMUST00000040844.9
Ankrd27
ankyrin repeat domain 27 (VPS9 domain)
chr11_-_82890541 0.01 ENSMUST00000092844.6
ENSMUST00000021033.9
ENSMUST00000018985.8
Rad51d
RAD51 homolog D
chr2_+_156613664 0.01 ENSMUST00000169464.2
ENSMUST00000109567.3
Dlgap4
discs, large homolog-associated protein 4 (Drosophila)
chr7_+_112023469 0.01 ENSMUST00000106653.2
Usp47
ubiquitin specific peptidase 47
chr11_-_23895208 0.01 ENSMUST00000102863.2
ENSMUST00000020513.3
Papolg
poly(A) polymerase gamma
chr14_+_12284198 0.01 ENSMUST00000112669.3
ENSMUST00000163392.1
3830406C13Rik
RIKEN cDNA 3830406C13 gene
chr9_-_115310421 0.01 ENSMUST00000035010.8
Stt3b
STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
chr7_-_71351485 0.01 ENSMUST00000094315.2
Gm10295
predicted gene 10295
chr4_-_34882919 0.01 ENSMUST00000098163.2
ENSMUST00000047950.5
Zfp292
zinc finger protein 292
chr2_-_64097994 0.01 ENSMUST00000131615.2
Fign
fidgetin
chr1_+_66468364 0.01 ENSMUST00000061620.9
Unc80
unc-80 homolog (C. elegans)
chr2_-_63184253 0.01 ENSMUST00000075052.3
ENSMUST00000112454.1
Kcnh7
potassium voltage-gated channel, subfamily H (eag-related), member 7
chr17_-_64331817 0.01 ENSMUST00000172733.1
ENSMUST00000172818.1
Pja2
praja 2, RING-H2 motif containing
chr15_+_4375462 0.01 ENSMUST00000061925.4
Plcxd3
phosphatidylinositol-specific phospholipase C, X domain containing 3
chr8_+_111536492 0.01 ENSMUST00000168428.1
ENSMUST00000171182.1
Znrf1
zinc and ring finger 1
chr8_-_78436640 0.00 ENSMUST00000034115.3
Pou4f2
POU domain, class 4, transcription factor 2
chr7_-_109083284 0.00 ENSMUST00000120876.1
ENSMUST00000055993.6
Ric3
resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
chr13_-_17805093 0.00 ENSMUST00000042365.7
Cdk13
cyclin-dependent kinase 13
chr11_-_71019233 0.00 ENSMUST00000108523.3
ENSMUST00000143850.1
Derl2
Der1-like domain family, member 2
chr11_-_96777492 0.00 ENSMUST00000127375.1
ENSMUST00000021246.2
ENSMUST00000107661.3
Snx11
sorting nexin 11
chr4_+_97777606 0.00 ENSMUST00000075448.6
ENSMUST00000092532.6
Nfia
nuclear factor I/A
chr2_-_130840091 0.00 ENSMUST00000044766.8
ENSMUST00000138990.1
ENSMUST00000120316.1
ENSMUST00000110243.1
4930402H24Rik
RIKEN cDNA 4930402H24 gene

Network of associatons between targets according to the STRING database.

First level regulatory network of AUGUGCC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0031959 mineralocorticoid receptor signaling pathway(GO:0031959)
0.0 0.1 GO:0010587 miRNA catabolic process(GO:0010587)
0.0 0.0 GO:0051866 general adaptation syndrome(GO:0051866)
0.0 0.0 GO:0098928 presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
0.0 0.1 GO:0061470 T follicular helper cell differentiation(GO:0061470)
0.0 0.1 GO:0061086 negative regulation of histone H3-K27 methylation(GO:0061086)
0.0 0.0 GO:0021698 cerebellar cortex structural organization(GO:0021698)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.0 GO:0044317 rod spherule(GO:0044317)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0008988 rRNA (adenine-N6-)-methyltransferase activity(GO:0008988)
0.0 0.0 GO:0017082 mineralocorticoid receptor activity(GO:0017082)
0.0 0.1 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.0 0.1 GO:0004464 leukotriene-C4 synthase activity(GO:0004464)