Project

avrg: GSE58827: Dynamics of the Mouse Liver

Navigation
Downloads

Results for UAAGACU

Z-value: 0.28

Motif logo

miRNA associated with seed UAAGACU

NamemiRBASE accession
MIMAT0003482

Activity profile of UAAGACU motif

Sorted Z-values of UAAGACU motif

Promoter Log-likelihood Transcript Gene Gene Info
chr10_-_45470201 0.56 ENSMUST00000079390.6
lin-28 homolog B (C. elegans)
chr11_+_44617310 0.48 ENSMUST00000081265.5
ENSMUST00000101326.3
ENSMUST00000109268.1
early B cell factor 1
chr14_-_31577318 0.43 ENSMUST00000112027.2
collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
chr12_+_32378692 0.32 ENSMUST00000172332.2
coiled-coil domain containing 71 like
chr4_+_17853451 0.30 ENSMUST00000029881.3
matrix metallopeptidase 16
chr5_+_67607873 0.29 ENSMUST00000087241.5
shisa homolog 3 (Xenopus laevis)
chr3_-_116424007 0.28 ENSMUST00000090464.4
CDC14 cell division cycle 14A
chr14_+_69029289 0.24 ENSMUST00000014957.8
stanniocalcin 1
chr17_-_6655939 0.23 ENSMUST00000179554.1
dynein light chain Tctex-type 1F
chr17_-_51832666 0.23 ENSMUST00000144331.1
special AT-rich sequence binding protein 1
chr5_+_108065742 0.22 ENSMUST00000081567.4
ENSMUST00000170319.1
ENSMUST00000112626.1
metal response element binding transcription factor 2
chr16_-_15594507 0.22 ENSMUST00000115776.1
ENSMUST00000115777.3
ubiquitin-conjugating enzyme E2 variant 2
chr16_-_76373827 0.21 ENSMUST00000121927.1
nuclear receptor interacting protein 1
chr1_-_97661950 0.21 ENSMUST00000053033.7
ENSMUST00000149927.1
DNA segment, Chr 1, ERATO Doi 622, expressed
chr11_+_44518959 0.20 ENSMUST00000019333.3
ring finger protein 145
chr2_+_122028544 0.20 ENSMUST00000028668.7
eukaryotic translation initiation factor 3, subunit J1
chr5_+_123343834 0.20 ENSMUST00000120593.1
B cell CLL/lymphoma 7A
chr17_-_6317474 0.20 ENSMUST00000169415.1
dynein light chain Tctex-type 1A
chr18_+_53176345 0.19 ENSMUST00000037850.5
sorting nexin 2
chr7_-_116038734 0.18 ENSMUST00000166877.1
SRY-box containing gene 6
chr12_-_69681795 0.18 ENSMUST00000183277.1
ENSMUST00000035773.7
son of sevenless homolog 2 (Drosophila)
chr5_-_5266038 0.18 ENSMUST00000115451.1
ENSMUST00000115452.1
ENSMUST00000131392.1
cyclin-dependent kinase 14
chr10_-_23349887 0.17 ENSMUST00000074366.6
ENSMUST00000092665.4
eyes absent 4 homolog (Drosophila)
chr2_-_6884975 0.17 ENSMUST00000114924.3
ENSMUST00000170438.1
ENSMUST00000114934.4
CUGBP, Elav-like family member 2
chr19_+_21778325 0.16 ENSMUST00000096194.2
ENSMUST00000025663.6
transmembrane protein 2
chr11_+_97415527 0.16 ENSMUST00000121799.1
Rho GTPase activating protein 23
chr14_-_20546512 0.16 ENSMUST00000022355.4
ENSMUST00000161445.1
ENSMUST00000159027.1
protein phosphatase 3, catalytic subunit, beta isoform
chr17_+_6601671 0.15 ENSMUST00000092966.4
dynein light chain Tctex-type 1C
chr1_-_21961581 0.15 ENSMUST00000029667.6
ENSMUST00000173058.1
ENSMUST00000173404.1
potassium voltage-gated channel, subfamily Q, member 5
chr13_-_111490111 0.14 ENSMUST00000047627.7
GC-rich promoter binding protein 1
chr1_-_119837613 0.14 ENSMUST00000064091.5
protein tyrosine phosphatase, non-receptor type 4
chr11_+_68691906 0.14 ENSMUST00000102611.3
myosin, heavy polypeptide 10, non-muscle
chr11_-_6475992 0.14 ENSMUST00000179343.1
purine rich element binding protein B
chr1_+_74506044 0.13 ENSMUST00000087215.5
rcd1 (required for cell differentiation) homolog 1 (S. pombe)
chr6_-_39206782 0.13 ENSMUST00000002305.8
jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
chr16_-_63864114 0.12 ENSMUST00000064405.6
Eph receptor A3
chr4_-_56865135 0.12 ENSMUST00000107612.2
ENSMUST00000045142.8
catenin (cadherin associated protein), alpha-like 1
chr11_-_86357570 0.12 ENSMUST00000043624.8
mediator complex subunit 13
chr18_+_34220978 0.11 ENSMUST00000079362.5
ENSMUST00000115781.3
adenomatosis polyposis coli
chr3_-_122984404 0.11 ENSMUST00000090379.2
ubiquitin specific peptidase 53
chr14_-_105176860 0.11 ENSMUST00000163545.1
RNA binding motif protein 26
chr6_-_54566484 0.11 ENSMUST00000019268.4
secernin 1
chr12_-_91590009 0.10 ENSMUST00000021345.6
general transcription factor II A, 1
chr7_-_66689589 0.10 ENSMUST00000124899.1
ankyrin repeat and SOCS box-containing 7
chr4_+_141147911 0.09 ENSMUST00000030757.9
F-box protein 42
chr4_-_41314877 0.09 ENSMUST00000030145.8
DDB1 and CUL4 associated factor 12
chr9_+_32696005 0.09 ENSMUST00000034534.6
ENSMUST00000050797.7
ENSMUST00000184887.1
E26 avian leukemia oncogene 1, 5' domain
chr19_-_14597983 0.09 ENSMUST00000052011.7
transducin-like enhancer of split 4, homolog of Drosophila E(spl)
chr6_-_100287441 0.08 ENSMUST00000101118.2
RING1 and YY1 binding protein
chr17_+_29549783 0.08 ENSMUST00000048677.7
TBC1 domain family, member 22B
chr2_+_74691090 0.08 ENSMUST00000061745.3
homeobox D10
chr9_-_72111827 0.08 ENSMUST00000183404.1
ENSMUST00000184783.1
transcription factor 12
chr2_+_74711911 0.08 ENSMUST00000111983.2
homeobox D3
chr6_-_99666762 0.06 ENSMUST00000032151.2
eukaryotic translation initiation factor 4E member 3
chr10_-_115315546 0.06 ENSMUST00000020343.7
RAB21, member RAS oncogene family
chr4_-_139131058 0.06 ENSMUST00000143971.1
mitochondrial inner membrane organizing system 1
chr2_-_125782834 0.06 ENSMUST00000053699.6
SECIS binding protein 2-like
chr2_-_37647199 0.06 ENSMUST00000028279.3
spermatid perinuclear RNA binding protein
chr1_+_82586942 0.05 ENSMUST00000113457.2
collagen, type IV, alpha 3
chr17_+_29093763 0.05 ENSMUST00000023829.6
cyclin-dependent kinase inhibitor 1A (P21)
chr15_-_93275151 0.05 ENSMUST00000057896.4
ENSMUST00000049484.6
glucoside xylosyltransferase 1
chr13_-_107890059 0.05 ENSMUST00000105097.2
zinc finger SWIM-type containing 6
chr3_-_79567679 0.05 ENSMUST00000076136.4
folliculin interacting protein 2
chr11_+_54438188 0.05 ENSMUST00000046835.7
folliculin interacting protein 1
chr10_+_95940663 0.04 ENSMUST00000053484.6
early endosome antigen 1
chr11_-_19018956 0.04 ENSMUST00000068264.7
ENSMUST00000144988.1
ENSMUST00000185131.1
Meis homeobox 1
chr8_+_117257019 0.04 ENSMUST00000166750.1
c-Maf inducing protein
chr6_+_38433913 0.03 ENSMUST00000160583.1
ubinuclein 2
chr6_+_77242644 0.02 ENSMUST00000159616.1
leucine rich repeat transmembrane neuronal 1
chr3_+_89520152 0.02 ENSMUST00000000811.7
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
chr7_-_111082997 0.01 ENSMUST00000161051.1
ENSMUST00000160132.1
ENSMUST00000106666.3
ENSMUST00000162415.1
eukaryotic translation initiation factor 4, gamma 2
chr8_+_90828820 0.01 ENSMUST00000109614.2
ENSMUST00000048665.6
chromodomain helicase DNA binding protein 9
chr11_-_82829024 0.01 ENSMUST00000021036.6
ENSMUST00000074515.4
ENSMUST00000103218.2
ring finger and FYVE like domain containing protein
chr4_+_123904832 0.00 ENSMUST00000030400.7
c-myc binding protein
chr4_-_126429501 0.00 ENSMUST00000069097.6
argonaute RISC catalytic subunit 3
chr9_+_72532214 0.00 ENSMUST00000163401.2
ENSMUST00000093820.3
regulatory factor X, 7
chr9_-_64737623 0.00 ENSMUST00000169058.1
RAB11a, member RAS oncogene family

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACU

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0042275 error-free postreplication DNA repair(GO:0042275)
0.1 0.4 GO:0008582 regulation of synaptic growth at neuromuscular junction(GO:0008582)
0.1 0.6 GO:0010587 miRNA catabolic process(GO:0010587)
0.1 0.2 GO:0001543 ovarian follicle rupture(GO:0001543)
0.0 0.1 GO:0070650 actin filament bundle distribution(GO:0070650)
0.0 0.1 GO:0097155 fasciculation of sensory neuron axon(GO:0097155)
0.0 0.5 GO:0035988 chondrocyte proliferation(GO:0035988)
0.0 0.2 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 0.2 GO:2000973 regulation of pro-B cell differentiation(GO:2000973)
0.0 0.3 GO:0051256 mitotic spindle midzone assembly(GO:0051256)
0.0 0.2 GO:0010764 negative regulation of fibroblast migration(GO:0010764)
0.0 0.2 GO:0016576 histone dephosphorylation(GO:0016576)
0.0 0.2 GO:0030214 hyaluronan catabolic process(GO:0030214)
0.0 0.2 GO:0001915 negative regulation of T cell mediated cytotoxicity(GO:0001915)
0.0 0.1 GO:2000211 regulation of glutamate metabolic process(GO:2000211)
0.0 0.2 GO:0034498 early endosome to Golgi transport(GO:0034498)
0.0 0.2 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.1 GO:0030578 PML body organization(GO:0030578)
0.0 0.1 GO:0021615 glossopharyngeal nerve morphogenesis(GO:0021615)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0031372 UBC13-MMS2 complex(GO:0031372)
0.1 0.2 GO:0030905 retromer, tubulation complex(GO:0030905)
0.0 0.2 GO:0000308 cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308)
0.0 0.2 GO:0005955 calcineurin complex(GO:0005955)
0.0 0.1 GO:0097513 myosin II filament(GO:0097513)
0.0 0.1 GO:0070557 PCNA-p21 complex(GO:0070557)
0.0 0.1 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.6 GO:0005868 cytoplasmic dynein complex(GO:0005868)
0.0 0.1 GO:0098559 cytoplasmic side of early endosome membrane(GO:0098559)
0.0 0.1 GO:0034750 Scrib-APC-beta-catenin complex(GO:0034750)
0.0 0.2 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:1990460 leptin receptor binding(GO:1990460)
0.0 0.2 GO:0033192 calmodulin-dependent protein phosphatase activity(GO:0033192)
0.0 0.1 GO:0032422 purine-rich negative regulatory element binding(GO:0032422)
0.0 0.5 GO:0070742 C2H2 zinc finger domain binding(GO:0070742)
0.0 0.1 GO:0004726 non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0 0.2 GO:0004415 hyalurononglucosaminidase activity(GO:0004415)
0.0 0.1 GO:0019912 cyclin-dependent protein kinase activating kinase activity(GO:0019912)
0.0 0.1 GO:0042030 ATPase inhibitor activity(GO:0042030)
0.0 0.1 GO:0005004 GPI-linked ephrin receptor activity(GO:0005004)
0.0 0.3 GO:0070006 metalloaminopeptidase activity(GO:0070006)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.0 0.2 REACTOME ACTIVATION OF RAC Genes involved in Activation of Rac
0.0 0.3 REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX Genes involved in Degradation of the extracellular matrix