talA-tktB	1.94677	Sigma38	talA|talA|talA|transaldolase A	tktB|tktB|tktB|transketolase II
otsBA	1.00896	Sigma38	otsA|otsA|otsA|trehalose-6-phosphate synthase	otsB|otsB|otsB|trehalose-6-phosphate phosphatase
tktB	0.965054	Sigma38	tktB|tktB|tktB|transketolase II
ycgZ-ymgA-ariR-ymgC	0.92782	Sigma38	ariR|ariR|ariR|regulator of acid resistance, influenced by indole	ymgC|ymgC|ymgC|protein involved in biofilm formation	ymgA|ymgA|ymgA|protein involved in biofilm formation	ycgZ|ycgZ|ycgZ|predicted protein
ybiI	0.926153	Sigma38	ybiI|ybiI|ybiI|conserved protein
gadBC	0.921063	Sigma38	gadB|gadB|gadB|glutamate decarboxylase B subunit	gadC|gadC|gadC|glutamic acid:4-aminobutyrate antiporter
yhjG	0.87935	Sigma38	yhjG|yhjG|yhjG|predicted outer membrane biogenesis protein
osmF-yehYXW	0.868499	Sigma38	osmF|osmF|osmF|glycine betaine ABC transporter - periplasmic binding protein	yehW|yehW|yehW|glycine betaine ABC transporter - putative membrane subunit	yehX|yehX|yehX|glycine betaine ABC transporter - putative ATP binding subunit	yehY|yehY|yehY|glycine betaine ABC transporter - putative membrane subunit
ybgA-phr	0.74116	Sigma38	ybgA|ybgA|ybgA|conserved protein	phr|phr|phr|deoxyribodipyrimidine photolyase (photoreactivation)
yciGFE	0.718403	Sigma38	yciG|yciG|yciG|predicted protein	yciF|yciF|yciF|conserved protein	yciE|yciE|yciE|conserved protein
puuCBE	0.698574	Sigma38	puuB|puuB|puuB|&gamma;-glutamylputrescine oxidase	puuC|puuC|puuC|&gamma;-glutamyl-&gamma;-aminobutyraldehyde dehydrogenase	puuE|puuE|puuE|4-aminobutyrate aminotransferase
poxB	0.684061	Sigma38	poxB|poxB|poxB|pyruvate oxidase
puuAP	0.658462	Sigma38	puuP|puuP|puuP|putrescine:H<sup>+</sup> symporter PuuP	puuA|puuA|puuA|glutamate-putrescine ligase
yiaG	0.64014	Sigma38	yiaG|yiaG|yiaG|predicted transcriptional regulator
proP	0.634738	Sigma38	proP|proP|proP|osmolyte:H<sup>+</sup> symporter ProP
yjiY	0.613179	Sigma38	yjiY|yjiY|yjiY|inner membrane protein - predicted transporter
otsA	0.596738	Sigma38	otsA|otsA|otsA|trehalose-6-phosphate synthase
gabDTP	0.595219	Sigma38	gabD|gabD|gabD|succinate-semialdehyde dehydrogenase (NADP<sup>+</sup>)	gabT|gabT|gabT|4-aminobutyrate aminotransferase	gabP|gabP|gabP|4-aminobutyrate:H<sup>+</sup> symporter
acnA	0.551403	Sigma38	acnA|acnA|acnA|aconitate hydratase 1
gadAX	0.531049	Sigma38	gadX|gadX|gadX|GadX DNA-binding transcriptional dual regulator	gadA|gadA|gadA|glutamate decarboxylase A subunit
ecnB	0.526691	Sigma38	ecnB|ecnB|ecnB|bacteriolytic entericidin B lipoprotein
kbp	0.516822	Sigma38	kbp|kbp|kbp|K<sup>+</sup> binding protein
yciG	0.508361	Sigma38	yciG|yciG|yciG|predicted protein
cbpAM	0.482474	Sigma38	cbpM|cbpM|cbpM|chaperone modulator protein CbpM	cbpA|cbpA|cbpA|chaperone with DnaK; curved DNA-binding protein
hchA	0.470731	Sigma38	hchA|hchA|hchA|amino acid deglycase Hsp31
csgDEFG	0.467083	Sigma38	csgG|csgG|csgG|curli secretion channel	csgF|csgF|csgF|curli assembly component	csgE|csgE|csgE|curli transport specificity factor	csgD|csgD|csgD|CsgD DNA-binding transcriptional dual regulator
tam	0.437796	Sigma38	tam|tam|tam|<i>trans</i>-aconitate 2-methyltransferase
hofMNOP	0.431856	Sigma38	hofM|hofM|hofM|protein involved in utilization of DNA as a carbon source	hofO|hofO|hofO|protein involved in utilization of DNA as a carbon source	hofN|hofN|hofN|protein involved in utilization of DNA as a carbon source	hofP|hofP|hofP|protein involved in utilization of DNA as a carbon source
csiD-lhgO-gabDTP	0.427881	Sigma38	gabD|gabD|gabD|succinate-semialdehyde dehydrogenase (NADP<sup>+</sup>)	lhgO|lhgO|lhgO|L-2-hydroxyglutarate oxidase	gabP|gabP|gabP|4-aminobutyrate:H<sup>+</sup> symporter	csiD|csiD|csiD|predicted protein	gabT|gabT|gabT|4-aminobutyrate aminotransferase
sdsN	0.423638	Sigma38	sdsN|sdsN|sdsN|YecC3'
yffOP	0.419118	Sigma38	yffO|yffO|yffO|CPZ-55 prophage; predicted protein	yffP|yffP|yffP|CPZ-55 prophage; predicted protein
ydbK-ompN	0.401833	Sigma38	ydbK|ydbK|ydbK|pyruvate:flavodoxin oxidoreductase	ompN|ompN|ompN|outer membrane pore protein N, non-specific
lsrACDBFG-tam	0.39717	Sigma38	lsrA|lsrA|lsrA|AI-2 ABC transporter - ATP binding subunit	lsrC|lsrC|lsrC|Autoinducer-2 ABC transporter - membrane subunit	lsrB|lsrB|lsrB|autoinducer-2 ABC transporter - periplasmic binding protein	lsrD|lsrD|lsrD|Autoinducer-2 ABC transporter - membrane subunit	lsrG|lsrG|lsrG|phospho-AI-2 isomerase	lsrF|lsrF|lsrF|3-hydroxy-2,4-pentadione 5-phosphate thiolase	tam|tam|tam|<i>trans</i>-aconitate 2-methyltransferase
gadE	0.389852	Sigma38	gadE|gadE|gadE|GadE DNA-binding transcriptional activator
yeiL	0.380948	Sigma38	yeiL|yeiL|yeiL|YeiL DNA-binding transcriptional activator
dkgB	0.37772	Sigma38	dkgB|dkgB|dkgB|methylglyoxal reductase/4-nitrobenzaldehyde reductase/2,5-diketo-D-gluconate reductase
msyB	0.375713	Sigma38	msyB|msyB|msyB|acidic protein that suppresses heat sensitivity of a <i>secY</i> mutant
blc	0.362223	Sigma38	blc|blc|blc|outer membrane lipoprotein (lipocalin)
ydbD	0.325591	Sigma38	ydbD|ydbD|ydbD|protein involved in detoxification of methylglyoxal
yhiM	0.310799	Sigma38	yhiM|yhiM|yhiM|inner membrane protein with a role in acid resistance
katE	0.302042	Sigma38	katE|katE|katE|catalase II
gpmM-envC-yibQ	0.281381	Sigma38	envC|envC|envC|EnvC divisome associated factor, activator of peptidoglycan hydrolases	yibQ|yibQ|yibQ|putative nucleoside (IDP) diphosphatase	gpmM|gpmM|gpmM|2,3-bisphosphoglycerate-independent phosphoglycerate mutase
yihG	0.27566	Sigma38	yihG|yihG|yihG|predicted endonuclease
yadV-htrE	0.274876	Sigma38	htrE|htrE|htrE|putative outer membrane usher protein	yadV|yadV|yadV|probable pilin chaperone similar to PapD
ydcSTUV-patD	0.270206	Sigma38	patD|patD|patD|&gamma;-aminobutyraldehyde dehydrogenase	ydcV|ydcV|ydcV|putative transport protein, ABC family - membrane component	ydcT|ydcT|ydcT|putative transport protein, ABC superfamily - ATP binding component	ydcU|ydcU|ydcU|putative transport protein, ABC superfamily - membrane component	ydcS|ydcS|ydcS|putative transport protein, ABC superfamily - periplasmic binding protein / polyhydroxybutyrate synthase
speC	0.249766	Sigma38	speC|speC|speC|ornithine decarboxylase, biosynthetic
yhfG-fic-pabA	0.243281	Sigma38	fic|fic|fic|stationary-phase protein	pabA|pabA|pabA|aminodeoxychorismate synthase component 2	yhfG|yhfG|yhfG|predicted protein
aldB	0.226346	Sigma38	aldB|aldB|aldB|acetaldehyde dehydrogenase
puuDRCBE	0.22213	Sigma38	puuR|puuR|puuR|PuuR DNA-binding transcriptional repressor	puuC|puuC|puuC|&gamma;-glutamyl-&gamma;-aminobutyraldehyde dehydrogenase	puuB|puuB|puuB|&gamma;-glutamylputrescine oxidase	puuD|puuD|puuD|&gamma;-glutamyl-&gamma;-aminobutyrate hydrolase	puuE|puuE|puuE|4-aminobutyrate aminotransferase
dhaR	0.209312	Sigma38	dhaR|dhaR|dhaR|DhaR DNA-binding transcriptional dual regulator
ryjA	0.194939	Sigma38	ryjA|ryjA|ryjA|RyjA
treA	0.158615	Sigma38	treA|treA|treA|periplasmic trehalase
osmB	0.153085	Sigma38	osmB|osmB|osmB|OsmB osmotically inducible lipoprotein
narU	0.15134	Sigma38	narU|narU|narU|nitrate / nitrite transporter NarU
treF	0.14807	Sigma38	treF|treF|treF|cytoplasmic trehalase
rsd	0.144496	Sigma38	rsd|rsd|rsd|regulator of &sigma;<sup>70</sup> (&sigma;<sup>D</sup>), stationary phase protein
asr	0.14061	Sigma38	asr|asr|asr|acid shock protein
mpl	0.104751	Sigma38	mpl|mpl|mpl|UDP-N-acetylmuramate:L-alanyl-&gamma;-D-glutamyl-<i>meso</i>-diaminoheptanedioate-D-alanine ligase/UDP-N-acetylmuramate:L-alanyl-&gamma;-D-glutamyl-<i>meso</i>-diaminopimelate ligase
dkgA	0.101632	Sigma38	dkgA|dkgA|dkgA|methylglyoxal reductase/isobutyraldehyde reductase/&beta;-keto ester reductase/2,5-diketo-D-gluconate reductase
ytfK	0.0899708	Sigma38	ytfK|ytfK|ytfK|conserved protein
iraD	0.089106	Sigma38	iraD|iraD|iraD|inhibitor of &sigma;<sup>S</sup> proteolysis
hdfR	0.0875967	Sigma38	hdfR|hdfR|hdfR|HdfR DNA-binding transcriptional dual regulator
dgcC	0.0784436	Sigma38	dgcC|dgcC|dgcC|diguanylate cyclase
alkA	0.0740235	Sigma38	alkA|alkA|alkA|3-methyl-adenine DNA glycosylase II, inducible
rssB	0.0697212	Sigma38	rssB|rssB|rssB|regulator of RpoS
gadX	0.0688198	Sigma38	gadX|gadX|gadX|GadX DNA-binding transcriptional dual regulator
osmC	0.0651335	Sigma38	osmC|osmC|osmC|osmotically inducible peroxiredoxin
pykF	0.0561191	Sigma38	pykF|pykF|pykF|pyruvate kinase I
bolA	0.0512693	Sigma38	bolA|bolA|bolA|BolA DNA-binding transcriptional dual regulator
yddG	0.0488399	Sigma38	yddG|yddG|yddG|aromatic amino acid exporter
patA	0.0277232	Sigma38	patA|patA|patA|putrescine aminotransferase
sra	0.0232218	Sigma38	sra|sra|sra|30S ribosomal subunit protein S22
ydhYVWXUT	0.0216349	Sigma38	ydhY|ydhY|ydhY|predicted 4Fe-4S ferredoxin-type protein	ydhX|ydhX|ydhX|predicted 4Fe-4S ferredoxin-type protein	ydhW|ydhW|ydhW|predicted protein	ydhV|ydhV|ydhV|predicted oxidoreductase	ydhU|ydhU|ydhU|predicted cytochrome	ydhT|ydhT|ydhT|conserved protein
pcnB-folK	0.0208418	Sigma38	pcnB|pcnB|pcnB|poly(A) polymerase I	folK|folK|folK|6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
