rtcR	3.99546	Sigma54	rtcR|rtcR|rtcR|RtcR DNA-binding transcriptional activator
dcuD	3.49091	Sigma54	dcuD|dcuD|dcuD|putative transport protein, C4-dicarboxylate uptake C family
nac	3.01817	Sigma54	nac|nac|nac|Nac DNA-binding transcriptional dual regulator
ygfK-ssnA	2.78716	Sigma54	ygfK|ygfK|ygfK|predicted oxidoreductase, Fe-S subunit	ssnA|ssnA|ssnA|predicted chlorohydrolase/aminohydrolase
glnK-amtB	2.68215	Sigma54	glnK|glnK|glnK|nitrogen regulatory protein GlnK	amtB|amtB|amtB|ammonia / ammonium transporter
zraP	2.57251	Sigma54	zraP|zraP|zraP|zinc responsive, periplasmic protein with chaperone activity
hyfABCDEFGHIJR-focB	2.21756	Sigma54	hyfJ|hyfJ|hyfJ|hydrogenase 4 component J, putative protein processing element	hyfI|hyfI|hyfI|hydrogenase 4, small subunit	hyfH|hyfH|hyfH|hydrogenase 4, component H	hyfC|hyfC|hyfC|hydrogenase 4, component C	hyfB|hyfB|hyfB|hydrogenase 4, component B	hyfA|hyfA|hyfA|hydrogenase 4, component A	hyfG|hyfG|hyfG|hydrogenase 4, large subunit	hyfF|hyfF|hyfF|hydrogenase 4, component F	hyfE|hyfE|hyfE|hydrogenase 4, component E	hyfD|hyfD|hyfD|hydrogenase 4, component D	hyfR|hyfR|hyfR|HyfR DNA-binding transcriptional activator	focB|focB|focB|FocB formate FNT transporter
hycABCDEFGHI	2.19551	Sigma54	hycD|hycD|hycD|hydrogenase 3, membrane subunit	hycE|hycE|hycE|hydrogenase 3, large subunit	hycF|hycF|hycF|formate hydrogenlyase complex iron-sulfur protein	hycG|hycG|hycG|hydrogenase 3 and formate hydrogenlyase complex, HycG subunit	hycA|hycA|hycA|regulator of the transcriptional regulator FhlA	hycB|hycB|hycB|hydrogenase 3, Fe-S subunit	hycC|hycC|hycC|hydrogenase 3, membrane subunit	hycH|hycH|hycH|protein required for maturation of hydrogenase 3	hycI|hycI|hycI|hydrogenase 3 maturation protease
yhdWXYZ	2.0492	Sigma54	yhdZ|yhdZ|yhdZ|putative transport protein, ABC superfamily - periplasmic binding protein	yhdY|yhdY|yhdY|putative transport protein, ABC superfamily - membrane component	yhdX|yhdX|yhdX|putative transport protein, ABC superfamily - ATP-binding component	yhdW|yhdW|yhdW|putative transport protein, ABC superfamily - membrane component
rtcBA	1.61867	Sigma54	rtcB|rtcB|rtcB|RNA-splicing ligase RtcB	rtcA|rtcA|rtcA|RNA 3'-terminal phosphate cyclase
atoDAEB	1.36945	Sigma54	atoB|atoB|atoB|acetyl-CoA acetyltransferase	atoA|atoA|atoA|acetyl-CoA:acetoacetyl-CoA transferase, &beta; subunit	atoD|atoD|atoD|acetyl-CoA:acetoacetyl-CoA transferase, &alpha; subunit	atoE|atoE|atoE|predicted short chain fatty acid transporter
xdhABC	1.31093	Sigma54	xdhA|xdhA|xdhA|xanthine dehydrogenase subunit	xdhB|xdhB|xdhB|xanthine dehydrogenase subunit, FAD-binding domain	xdhC|xdhC|xdhC|xanthine dehydrogenase, Fe-S subunit
chaC	1.26215	Sigma54	chaC|chaC|chaC|predicted glutathione-specific gamma-glutamylcyclotransferase
potFGHI	1.00648	Sigma54	potI|potI|potI|putrescine ABC transporter - membrane subunit	potH|potH|potH|putrescine ABC transporter - membrane subunit	potG|potG|potG|putrescine ABC transporter - ATP binding subunit	potF|potF|potF|putrescine ABC transporter - periplasmic binding protein
yahE	0.980695	Sigma54	yahE|yahE|yahE|predicted protein
pspG	0.95575	Sigma54	pspG|pspG|pspG|phage shock protein G
yhjC	0.888448	Sigma54	yhjC|yhjC|yhjC|predicted DNA-binding transcriptional regulator
acrD	0.871365	Sigma54	acrD|acrD|acrD|AcrAD-TolC multidrug efflux pump - permease subunit
aslB	0.861759	Sigma54	aslB|aslB|aslB|predicted anaerobic sulfatase maturation enzyme
radD	0.79973	Sigma54	radD|radD|radD|predicted ATP-dependent helicase; implicated in DNA repair
argT-hisJQMP	0.793048	Sigma54	hisM|hisM|hisM|lysine/arginine/ornithine ABC transporter / histidine ABC transporter - membrane subunit	hisP|hisP|hisP|lysine / arginine / ornithine ABC transporter / histidine ABC transporter - ATP binding subunit	argT|argT|argT|lysine / arginine / ornithine ABC transporter - periplasmic binding protein	hisQ|hisQ|hisQ|lysine / arginine / ornithine ABC transporter / histidine ABC transporter - membrane subunit	hisJ|hisJ|hisJ|histidine ABC transporter - periplasmic binding protein
actP	0.758938	Sigma54	actP|actP|actP|acetate / glycolate : cation symporter
ddpXABCDF	0.710628	Sigma54	ddpX|ddpX|ddpX|D-Ala-D-Ala dipeptidase	ddpD|ddpD|ddpD|YddP	ddpF|ddpF|ddpF|YddO	ddpA|ddpA|ddpA|YddS	ddpB|ddpB|ddpB|YddR	ddpC|ddpC|ddpC|YddQ
norVW	0.674267	Sigma54	norW|norW|norW|NADH:flavorubredoxin reductase	norV|norV|norV|flavorubredoxin
puuP	0.586018	Sigma54	puuP|puuP|puuP|putrescine:H<sup>+</sup> symporter PuuP
crl	0.356283	Sigma54	crl|crl|crl|RNA polymerase holoenzyme assembly factor Crl
hydN-hypF	0.344045	Sigma54	hypF|hypF|hypF|hydrogenase maturation protein, carbamoyltransferase	hydN|hydN|hydN|putative electron transport protein HydN
rutABCDEFG	0.243258	Sigma54	rutC|rutC|rutC|predicted aminoacrylate peracid reductase	rutB|rutB|rutB|peroxyureidoacrylate / ureidoacrylate amido hydrolase	rutA|rutA|rutA|pyrimidine oxygenase	rutG|rutG|rutG|uracil:H<sup>+</sup> symporter RutG	rutF|rutF|rutF|flavin reductase	rutE|rutE|rutE|predicted malonic semialdehyde reductase	rutD|rutD|rutD|predicted aminoacrylate hydrolase
astCADBE	0.192041	Sigma54	astA|astA|astA|arginine succinyltransferase	astB|astB|astB|succinylarginine dihydrolase	astC|astC|astC|succinylornithine transaminase	astD|astD|astD|aldehyde dehydrogenase	astE|astE|astE|succinylglutamate desuccinylase
glnALG	0.0023788	Sigma54	glnL|glnL|glnL|NtrB	glnA|glnA|glnA|glutamine synthetase	glnG|glnG|glnG|NtrC transcriptional dual regulator
