GSE55662: Plasticity of transcriptional regulation under antibiotic stress

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
cueR Links RegulonDB EcoCyc	cueR	CueR transcriptional dual regulator

Promoter	Log-likelihood	Transcript	Gene	Gene Info
cueO Show fit	1.40		cueO Links RegulonDB EcoCyc Show fit	cuprous oxidase / multicopper oxidase with role in copper homeostasis
moaABCDE Show fit	0.29		moaE Links RegulonDB EcoCyc Show fit moaD Links RegulonDB EcoCyc Show fit moaC Links RegulonDB EcoCyc Show fit moaB Links RegulonDB EcoCyc Show fit moaA Links RegulonDB EcoCyc Show fit	molybdopterin synthase large subunit molybdopterin synthase small subunit cyclic pyranopterin monophosphate synthase MoaB protein GTP 3',8'-cyclase

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	1.3	GO:0010273	detoxification of copper ion(GO:0010273) detoxification of inorganic compound(GO:0061687)
0.1	0.3	GO:0046039	protein hexamerization(GO:0034214) GTP metabolic process(GO:0046039) prosthetic group metabolic process(GO:0051189)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.4	GO:0030288	outer membrane-bounded periplasmic space(GO:0030288)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	1.4	GO:0016722	oxidoreductase activity, acting on diphenols and related substances as donors(GO:0016679) oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682) oxidoreductase activity, oxidizing metal ions(GO:0016722)
0.0	0.3	GO:0016783	sulfurtransferase activity(GO:0016783)