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GSE67402: E.coli regulatory changes under long-term starvation

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Results for HdfR

Z-value: 1.07

Transcription factors associated with HdfR

Gene Symbol Gene ID Gene Info
hdfR HdfR DNA-binding transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
hdfR0.821.9e-07Click!

Activity profile of HdfR motif

Sorted Z-values of HdfR motif

Network of associatons between targets according to the STRING database.

Promoter Score Transcript Gene Gene Info
gltBDF 29.80 glutamate synthase, large subunit
glutamate synthase, small subunit
periplasmic protein
flhDC 28.71 FlhC transcriptional dual regulator
FlhD transcriptional dual regulator

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
9.9 29.8 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.1 28.7 GO:0097659 transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 29.8 GO:0030288 outer membrane-bounded periplasmic space(GO:0030288)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
5.0 29.8 GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638)