GSE67402: E.coli regulatory changes under long-term starvation
Gene Symbol | Gene ID | Gene Info |
---|---|---|
allR
|
allR | AllR DNA-binding transcriptional repressor |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
allA | 34.37 |
allA
|
ureidoglycolate lyase |
|
allS | 30.78 |
allS
|
AllS transcriptional activator |
|
gcl-hyi-glxR-ybbW-allB-ybbY-glxK | 24.87 |
allB
glxK
hyi
gcl
glxR
ybbY
ybbW
|
allantoinase glycerate kinase II hydroxypyruvate isomerase glyoxylate carboligase tartronate semialdehyde reductase 2 putative transport protein, nucleobase:cation symporter-2 (NCS2) family putative transporter, nucleobase:cation symporter-1 (NCS1) family |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
8.3 | 24.9 | GO:0006145 | purine nucleobase catabolic process(GO:0006145) |
0.5 | 30.8 | GO:0045893 | positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 24.9 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
11.5 | 34.4 | GO:0016842 | amidine-lyase activity(GO:0016842) |
6.2 | 24.9 | GO:0015205 | nucleobase transmembrane transporter activity(GO:0015205) oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor(GO:0016662) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812) |
0.5 | 30.8 | GO:0043565 | sequence-specific DNA binding(GO:0043565) |