Motif ID: NRF1.p2

Z-value: 4.836


Transcription factors associated with NRF1.p2:

Gene SymbolEntrez IDGene Name
Nrf1 18181 nuclear respiratory factor 1

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Nrf1chr6_+_300263200.721.1e-30Click!


Activity profile for motif NRF1.p2.

activity profile for motif NRF1.p2


Sorted Z-values histogram for motif NRF1.p2

Sorted Z-values for motif NRF1.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of NRF1.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr16_-_90727466 36.566 NM_025642
2610039C10Rik
RIKEN cDNA 2610039C10 gene
chr7_-_4610551 35.360 NM_172894
Ppp6r1
protein phosphatase 6, regulatory subunit 1
chr11_-_33063024 34.747 NM_008722
Npm1
nucleophosmin 1
chr11_-_69734838 33.796 NM_001166589
NM_001166591
NM_181582
Eif5a


eukaryotic translation initiation factor 5A


chr7_-_4610179 33.369 Ppp6r1
protein phosphatase 6, regulatory subunit 1
chr7_+_52071622 31.665 NM_001171024
NM_053074
Nup62-il4i1
Nup62
Nup62-Il4i1 protein
nucleoporin 62
chr7_+_52071438 31.536 Nup62
nucleoporin 62
chr5_-_138227400 30.204 Mepce
methylphosphate capping enzyme
chr8_+_125091889 29.943 NM_026014
Cdt1
chromatin licensing and DNA replication factor 1
chr2_-_172195998 29.767 NM_011497
Aurka
aurora kinase A
chr11_-_40546863 29.705 NM_013552
Hmmr
hyaluronan mediated motility receptor (RHAMM)
chr17_-_24388262 29.492 NM_007634
Ccnf
cyclin F
chr8_+_125091925 29.437 Cdt1
chromatin licensing and DNA replication factor 1
chr6_+_66485368 28.241 NM_019499
Mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast)
chr11_+_40547368 27.147 Nudcd2
NudC domain containing 2
chr11_+_97177029 26.553 NM_025927
Mrpl45
mitochondrial ribosomal protein L45
chr4_+_55362949 26.449 Rad23b
RAD23b homolog (S. cerevisiae)
chr5_+_107393340 26.382 NM_009863
Cdc7
cell division cycle 7 (S. cerevisiae)
chr11_-_34647110 26.323 NM_027411
Ccdc99
coiled-coil domain containing 99
chr15_+_84753875 26.291 Nup50
nucleoporin 50
chr13_-_68720969 25.974 NM_172480
Mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
chr19_-_7315495 25.761 NM_027643
Naa40
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
chr17_-_53828596 25.572 NM_028232
Sgol1
shugoshin-like 1 (S. pombe)
chr11_-_69735459 24.338 NM_001166593
Eif5a
eukaryotic translation initiation factor 5A
chr10_-_80261226 24.265 NM_023900
Plekhj1
pleckstrin homology domain containing, family J member 1
chr17_+_35031503 24.055 NM_198886
Zbtb12
zinc finger and BTB domain containing 12
chr11_+_100981384 23.775 NM_134024
Tubg1
tubulin, gamma 1
chr5_-_121902350 23.361 NM_026129
Erp29
endoplasmic reticulum protein 29
chr11_+_40547143 23.329 NM_026023
Nudcd2
NudC domain containing 2
chr6_-_126889539 22.898 NM_009013
Rad51ap1
RAD51 associated protein 1
chr15_+_84753817 22.672 NM_016714
Nup50
nucleoporin 50
chr2_-_126959605 21.991 NM_144818
Ncaph
non-SMC condensin I complex, subunit H
chr15_-_51823257 21.927 NM_009009
Rad21
RAD21 homolog (S. pombe)
chr15_+_103070840 21.459 NM_001039129
NM_010447
Hnrnpa1

heterogeneous nuclear ribonucleoprotein A1

chr15_-_102501463 21.184 NM_026468
Atp5g2
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
chr17_+_35118956 21.139 NM_030597
Lsm2
LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
chr10_+_127669118 20.993 NM_001136082
NM_001164080
NM_001164081
Timeless


timeless homolog (Drosophila)


chr13_-_14705281 20.873 NM_029271
Mrpl32
mitochondrial ribosomal protein L32
chr11_+_3190334 20.798 NM_019574
Patz1
POZ (BTB) and AT hook containing zinc finger 1
chr5_-_138227888 20.669 NM_144913
Mepce
methylphosphate capping enzyme
chr6_-_86683191 20.471 Gmcl1
germ cell-less homolog 1 (Drosophila)
chr10_+_127669154 20.451 Timeless
timeless homolog (Drosophila)
chr1_-_167932735 20.228 NM_011137
NM_198932
Pou2f1

POU domain, class 2, transcription factor 1

chr4_+_140703968 20.029 Fbxo42
F-box protein 42
chr17_+_35118792 19.998 NM_001110101
Lsm2
LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
chr3_+_40603872 19.842 NM_011495
Plk4
polo-like kinase 4 (Drosophila)
chr11_-_69734709 19.827 NM_001166595
Eif5a
eukaryotic translation initiation factor 5A
chr3_+_79433000 19.759 NM_029482
4930579G24Rik
RIKEN cDNA 4930579G24 gene
chr11_-_11708917 19.729 NM_001163359
NM_001163360
NM_021891
Fignl1


fidgetin-like 1


chr6_+_83028608 19.637 Pcgf1
polycomb group ring finger 1
chr6_-_86683330 19.527 NM_011818
Gmcl1
germ cell-less homolog 1 (Drosophila)
chr10_+_79727708 19.262 NM_001122604
NM_001122605
NM_133188
Dazap1


DAZ associated protein 1


chr18_-_70632130 19.123 NM_172967
4930503L19Rik
RIKEN cDNA 4930503L19 gene
chr19_-_5964187 18.708 NM_001164057
NM_008893
Pola2

polymerase (DNA directed), alpha 2

chr2_-_169956719 18.437 NM_001033299
Zfp217
zinc finger protein 217
chr5_+_33361386 18.166 NM_011738
Ywhah
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
chr6_+_83028337 18.004 NM_197992
Pcgf1
polycomb group ring finger 1
chr5_-_137943570 17.989 NM_028753
Pop7
processing of precursor 7, ribonuclease P family, (S. cerevisiae)
chr2_-_156832762 17.917 NM_025853
Dsn1
DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)
chr5_-_77738960 17.736 NM_019836
2610024G14Rik
RIKEN cDNA 2610024G14 gene
chr17_-_23810808 17.512 Thoc6
THO complex 6 homolog (Drosophila)
chr19_+_5490454 17.299 NM_007687
Cfl1
cofilin 1, non-muscle
chr17_+_56812647 17.226 NM_027933
Ranbp3
RAN binding protein 3
chr13_-_22134795 17.157 NM_178186
Hist1h2ag
Hist1h2ai
histone cluster 1, H2ag
histone cluster 1, H2ai
chr17_-_23810736 17.056 NM_001008425
Thoc6
THO complex 6 homolog (Drosophila)
chr4_-_131901576 17.032 NM_001197082
NM_133878
Rcc1

regulator of chromosome condensation 1

chr12_+_79962662 17.000 Eif2s1
eukaryotic translation initiation factor 2, subunit 1 alpha
chr12_+_101122706 16.946 NM_028354
Tdp1
tyrosyl-DNA phosphodiesterase 1
chr7_+_31017305 16.926 Polr2i
polymerase (RNA) II (DNA directed) polypeptide I
chr17_+_35035898 16.792 NM_145830
Ehmt2
euchromatic histone lysine N-methyltransferase 2
chr16_+_18498805 16.767 NM_001081682
Gnb1l
guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr16_+_10412017 16.669 NM_011955
Nubp1
nucleotide binding protein 1
chr1_-_193399412 16.323 NM_029766
Dtl
denticleless homolog (Drosophila)
chr7_+_13610047 16.276 Trim28
tripartite motif-containing 28
chr10_+_79144868 16.250 NM_177613
Cdc34
cell division cycle 34 homolog (S. cerevisiae)
chr6_+_42214999 16.105 NM_007610
Casp2
caspase 2
chr2_-_128769687 15.961 NM_020594
Zc3h8
zinc finger CCCH type containing 8
chr18_-_70632157 15.909 4930503L19Rik
RIKEN cDNA 4930503L19 gene
chr15_-_51823107 15.828 Rad21
RAD21 homolog (S. pombe)
chr11_+_77796215 15.517 NM_174852
Phf12
PHD finger protein 12
chrX_+_7455387 15.486 NM_138606
Pim2
proviral integration site 2
chr3_-_89222140 15.329 NM_016904
Cks1b
CDC28 protein kinase 1b
chr9_+_21420612 15.177 NM_001174078
NM_001174079
NM_011417
Smarca4


SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4


chr5_-_136410488 15.143 NM_018871
Ywhag
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
chr15_+_78744862 15.126 Pdxp
pyridoxal (pyridoxine, vitamin B6) phosphatase
chr10_-_80260968 15.114 Plekhj1
pleckstrin homology domain containing, family J member 1
chr2_+_120393393 15.090 NM_001177792
NM_001177793
NM_009222
Snap23


synaptosomal-associated protein 23


chr17_-_75951137 15.059 NM_133747
Fam98a
family with sequence similarity 98, member A
chr11_+_86358491 15.056 NM_001199045
NM_001199046
NM_001199047
NM_019756
Tubd1



tubulin, delta 1



chr11_-_34647016 15.042 Ccdc99
coiled-coil domain containing 99
chr2_+_172825687 15.008 Rae1
RAE1 RNA export 1 homolog (S. pombe)
chr10_-_116661519 14.928 NM_026570
Yeats4
YEATS domain containing 4
chr4_+_55362895 14.859 NM_009011
Rad23b
RAD23b homolog (S. cerevisiae)
chr2_-_174298383 14.784 Slmo2
slowmo homolog 2 (Drosophila)
chr5_+_33361571 14.756 Ywhah
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
chr15_-_94373918 14.676 NM_172437
Pus7l
pseudouridylate synthase 7 homolog (S. cerevisiae)-like
chr2_+_172825651 14.446 Rae1
RAE1 RNA export 1 homolog (S. pombe)
chr4_+_140703847 14.321 Fbxo42
F-box protein 42
chr16_+_18498963 14.300 NM_023120
Gnb1l
guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr10_-_126959446 14.281 NM_028230
Shmt2
serine hydroxymethyltransferase 2 (mitochondrial)
chr8_+_13338741 14.238 Tfdp1
transcription factor Dp 1
chr10_+_58786043 14.236 NM_011030
P4ha1
procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
chr7_-_134160552 14.155 2900092E17Rik
RIKEN cDNA 2900092E17 gene
chr6_+_113554785 14.012 6720456B07Rik
RIKEN cDNA 6720456B07 gene
chr8_-_109948891 13.931 NM_026277
Nob1
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
chr7_+_133792793 13.833 NM_029339
Ccdc101
coiled-coil domain containing 101
chr10_-_59465798 13.716 Anapc16
anaphase promoting complex subunit 16
chr8_-_86781160 13.693 NM_026423
Mri1
methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)
chr11_-_70468130 13.595 NM_011072
Pfn1
profilin 1
chr19_+_8797973 13.555 Snhg1
small nucleolar RNA host gene (non-protein coding) 1
chr5_-_122821971 13.509 NM_026883
1500011H22Rik
RIKEN cDNA 1500011H22 gene
chr14_+_70945119 13.495 Reep4
receptor accessory protein 4
chr10_-_79862025 13.482 Mbd3
methyl-CpG binding domain protein 3
chr8_-_82235601 13.439 NM_015751
Abce1
ATP-binding cassette, sub-family E (OABP), member 1
chr13_-_23663006 13.385 NM_178187
Hist1h2ae
histone cluster 1, H2ae
chr17_-_48548973 13.289 NM_001110832
NM_010913
Nfya

nuclear transcription factor-Y alpha

chr7_-_134160864 13.253 NM_030240
2900092E17Rik
RIKEN cDNA 2900092E17 gene
chr11_+_69794546 13.248 NM_026017
Ctdnep1
CTD nuclear envelope phosphatase 1
chr3_-_36470904 13.095 NM_009828
Ccna2
cyclin A2
chr7_+_87439301 13.076 NM_145150
Prc1
protein regulator of cytokinesis 1
chr10_-_80841099 13.069 NM_019757
Fzr1
fizzy/cell division cycle 20 related 1 (Drosophila)
chr13_-_23775827 13.013 NM_178189
Hist1h2ac
histone cluster 1, H2ac
chr8_+_34842513 13.005 NM_026584
Gtf2e2
general transcription factor II E, polypeptide 2 (beta subunit)
chr15_+_78744802 12.996 Pdxp
pyridoxal (pyridoxine, vitamin B6) phosphatase
chr15_-_11329374 12.990 Tars
threonyl-tRNA synthetase
chr1_+_55145132 12.947 Hspe1
heat shock protein 1 (chaperonin 10)
chr7_-_52722144 12.920 NM_007527
Bax
BCL2-associated X protein
chr10_-_59465725 12.803 Anapc16
anaphase promoting complex subunit 16
chr3_-_68848657 12.797 NM_025863
Trim59
tripartite motif-containing 59
chr9_-_21092394 12.791 NM_145416
Kri1
KRI1 homolog (S. cerevisiae)
chr13_+_73604668 12.791 Lpcat1
lysophosphatidylcholine acyltransferase 1
chr15_-_11329310 12.776 Tars
threonyl-tRNA synthetase
chr11_-_72951771 12.769 NM_010353
Gsg2
germ cell-specific gene 2
chr10_+_74674793 12.754 NM_153406
Specc1l
sperm antigen with calponin homology and coiled-coil domains 1-like
chr15_-_11329385 12.740 NM_033074
Tars
threonyl-tRNA synthetase
chr11_-_70468061 12.704 Pfn1
profilin 1
chr17_-_6317399 12.683 NM_001166629
Dynlt1c
Dynlt1a
dynein light chain Tctex-type 1C
dynein light chain Tctex-type 1A
chr15_-_11329379 12.661 Tars
threonyl-tRNA synthetase
chr3_-_36470845 12.630 Ccna2
cyclin A2
chr18_+_80403593 12.529 NM_001042408
Txnl4a
thioredoxin-like 4A
chr5_+_33361479 12.495 Ywhah
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
chr14_+_102053172 12.491 NM_016723
Uchl3
ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
chr10_-_126959397 12.489 Shmt2
serine hydroxymethyltransferase 2 (mitochondrial)
chr3_-_68848588 12.467 Trim59
tripartite motif-containing 59
chr7_+_29595894 12.453 NM_177301
Hnrnpl
heterogeneous nuclear ribonucleoprotein L
chrX_+_130842622 12.398 Cenpi
centromere protein I
chr3_+_88101037 12.365 NM_009836
Cct3
chaperonin containing Tcp1, subunit 3 (gamma)
chr18_+_44540137 12.351 NM_027490
Dcp2
DCP2 decapping enzyme homolog (S. cerevisiae)
chrX_+_130842701 12.314 NM_145924
Cenpi
centromere protein I
chr8_-_23704176 12.193 NM_001198998
NM_011696
Vdac3

voltage-dependent anion channel 3

chr8_+_90661746 12.183 NM_172757
Heatr3
HEAT repeat containing 3
chr14_-_47896531 12.137 NM_172598
Wdhd1
WD repeat and HMG-box DNA binding protein 1
chr19_+_8894752 12.119 Hnrnpul2
heterogeneous nuclear ribonucleoprotein U-like 2
chr13_+_21902235 12.100 NM_178185
NM_001177544
Hist1h2ah
Hist1h2ap
Hist1h2ai
Hist1h2ao
histone cluster 1, H2ah
histone cluster 1, H2ap
histone cluster 1, H2ai
histone cluster 1, H2ao
chr1_-_55144687 12.091 NM_010477
Hspd1
heat shock protein 1 (chaperonin)
chr9_-_57493393 12.085 Csk
c-src tyrosine kinase
chr11_+_57917712 12.082 Cnot8
CCR4-NOT transcription complex, subunit 8
chr8_-_122082604 12.032 NM_001167910
NM_019709
Mbtps1

membrane-bound transcription factor peptidase, site 1

chr1_-_55144637 12.006 Hspd1
heat shock protein 1 (chaperonin)
chr8_-_72758275 11.979 NM_133972
Armc6
armadillo repeat containing 6
chr12_-_111934448 11.903 Hsp90aa1
heat shock protein 90, alpha (cytosolic), class A member 1
chr14_+_32150060 11.881 Capn7
calpain 7
chr5_-_122822329 11.873 1500011H22Rik
RIKEN cDNA 1500011H22 gene
chr14_-_47896464 11.867 Wdhd1
WD repeat and HMG-box DNA binding protein 1
chr5_-_136410216 11.804 Ywhag
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
chr8_-_72758007 11.789 Armc6
armadillo repeat containing 6
chr13_-_22127419 11.768 NM_175659
Hist1h2ah
histone cluster 1, H2ah
chr3_-_36470882 11.768 Ccna2
cyclin A2
chr5_-_145726643 11.765 NM_001038627
NM_029438
Smurf1

SMAD specific E3 ubiquitin protein ligase 1

chr13_+_51740804 11.758 Cks2
CDC28 protein kinase regulatory subunit 2
chr13_+_51740600 11.753 NM_025415
Cks2
CDC28 protein kinase regulatory subunit 2
chr7_+_13609719 11.671 Trim28
tripartite motif-containing 28
chr4_-_120242805 11.608 NM_016748
Ctps
cytidine 5'-triphosphate synthase
chr6_-_83267540 11.575 NM_008638
Mthfd2
methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
chr5_+_122822505 11.534 NM_024216
Gpn3
GPN-loop GTPase 3
chr15_-_64143929 11.460 Asap1
ArfGAP with SH# domain, ankyrin repeat and PH domain1
chr9_-_53056152 11.414 NM_029936
Ddx10
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
chr18_+_6765174 11.412 NM_181070
Rab18
RAB18, member RAS oncogene family
chr5_+_125343060 11.404 NM_001081750
Zfp664
zinc finger protein 664
chr10_-_117147722 11.376 Mdm2
transformed mouse 3T3 cell double minute 2
chr7_-_29766721 11.348 NM_028659
Eif3k
eukaryotic translation initiation factor 3, subunit K
chr7_+_25332168 11.254 NM_009532
Xrcc1
X-ray repair complementing defective repair in Chinese hamster cells 1
chr18_-_74367362 11.226 Ska1
spindle and kinetochore associated complex subunit 1
chr17_-_71876150 11.205 NM_023294
Ndc80
NDC80 homolog, kinetochore complex component (S. cerevisiae)
chr3_+_68808879 11.159 NM_133786
Smc4
structural maintenance of chromosomes 4
chr7_-_134160841 11.153 2900092E17Rik
RIKEN cDNA 2900092E17 gene
chr17_-_71876127 11.146 Ndc80
NDC80 homolog, kinetochore complex component (S. cerevisiae)
chr3_-_35831775 11.111 Dcun1d1
DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
chr2_+_172196161 11.087 Cstf1
cleavage stimulation factor, 3' pre-RNA, subunit 1
chr7_-_16973112 11.080 NM_019748
Sae1
SUMO1 activating enzyme subunit 1
chr1_-_46910333 11.057 NM_172653
Slc39a10
solute carrier family 39 (zinc transporter), member 10
chr11_+_118884275 11.052 NM_007623
Cbx2
chromobox homolog 2 (Drosophila Pc class)
chr6_+_92041408 11.043 NM_011630
Nr2c2
nuclear receptor subfamily 2, group C, member 2
chr1_+_136859153 11.040 NM_026024
Ube2t
ubiquitin-conjugating enzyme E2T (putative)
chr18_+_80403581 11.019 NM_178604
Txnl4a
thioredoxin-like 4A
chr2_-_174298441 10.996 NM_025531
Slmo2
slowmo homolog 2 (Drosophila)
chr8_+_34842810 10.979 NM_001167922
Gtf2e2
general transcription factor II E, polypeptide 2 (beta subunit)
chr11_-_86071041 10.974 NM_027421
Ints2
integrator complex subunit 2
chr1_+_74552600 10.967 NM_021383
Rqcd1
rcd1 (required for cell differentiation) homolog 1 (S. pombe)
chr10_+_21015762 10.910 NM_001042593
NM_001145209
NM_019702
Hbs1l


Hbs1-like (S. cerevisiae)



Gene Ontology Analysis

Gene overrepresentation in process category:

Enrichment   P-value GO Accession GO Term
1.82 7.78e-83 GO:0044260 cellular macromolecule metabolic process
1.60 1.14e-69 GO:0044237 cellular metabolic process
1.69 1.33e-67 GO:0043170 macromolecule metabolic process
2.05 2.38e-65 GO:0090304 nucleic acid metabolic process
1.92 2.35e-62 GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.82 6.63e-57 GO:0034641 cellular nitrogen compound metabolic process
2.00 1.54e-55 GO:0010467 gene expression
1.52 1.20e-53 GO:0044238 primary metabolic process
1.78 3.29e-53 GO:0006807 nitrogen compound metabolic process
1.46 6.92e-52 GO:0008152 metabolic process
2.01 5.20e-51 GO:0016070 RNA metabolic process
1.83 3.69e-36 GO:0034645 cellular macromolecule biosynthetic process
1.82 3.12e-35 GO:0009059 macromolecule biosynthetic process
1.66 2.30e-31 GO:0044249 cellular biosynthetic process
2.83 8.56e-30 GO:0006396 RNA processing
1.63 8.80e-30 GO:0009058 biosynthetic process
1.76 2.99e-27 GO:0044267 cellular protein metabolic process
1.63 6.46e-24 GO:0010468 regulation of gene expression
1.65 6.65e-24 GO:2000112 regulation of cellular macromolecule biosynthetic process
1.69 3.59e-23 GO:0071841 cellular component organization or biogenesis at cellular level
2.24 1.55e-22 GO:0007049 cell cycle
1.63 1.65e-22 GO:0010556 regulation of macromolecule biosynthetic process
1.87 2.10e-21 GO:0006996 organelle organization
1.50 1.60e-20 GO:0060255 regulation of macromolecule metabolic process
1.58 2.55e-20 GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.63 2.86e-20 GO:0051252 regulation of RNA metabolic process
1.57 3.29e-20 GO:0051171 regulation of nitrogen compound metabolic process
1.74 8.86e-20 GO:0032774 RNA biosynthetic process
1.48 1.33e-19 GO:0031323 regulation of cellular metabolic process
1.74 1.36e-19 GO:0006351 transcription, DNA-dependent
2.52 3.31e-19 GO:0006259 DNA metabolic process
1.56 6.06e-19 GO:0031326 regulation of cellular biosynthetic process
1.55 6.61e-19 GO:0009889 regulation of biosynthetic process
1.43 7.83e-19 GO:0019222 regulation of metabolic process
1.61 1.72e-18 GO:0006355 regulation of transcription, DNA-dependent
1.47 2.26e-18 GO:0080090 regulation of primary metabolic process
1.17 1.28e-17 GO:0009987 cellular process
1.54 1.61e-17 GO:0019538 protein metabolic process
3.01 1.77e-17 GO:0008380 RNA splicing
2.54 4.91e-17 GO:0022403 cell cycle phase
1.62 5.00e-17 GO:0071842 cellular component organization at cellular level
2.72 5.39e-17 GO:0016071 mRNA metabolic process
1.50 9.88e-17 GO:0071840 cellular component organization or biogenesis
2.28 1.65e-16 GO:0022402 cell cycle process
2.79 6.32e-15 GO:0006281 DNA repair
1.65 6.88e-15 GO:0043412 macromolecule modification
2.31 9.95e-15 GO:0051276 chromosome organization
2.59 6.01e-14 GO:0051301 cell division
2.44 7.67e-14 GO:0006974 response to DNA damage stimulus
2.44 3.36e-13 GO:0000278 mitotic cell cycle
2.53 4.39e-13 GO:0000279 M phase
2.69 5.82e-13 GO:0006412 translation
1.61 3.42e-12 GO:0006464 protein modification process
1.44 4.41e-12 GO:0016043 cellular component organization
2.62 4.72e-12 GO:0006397 mRNA processing
2.72 1.18e-10 GO:0034660 ncRNA metabolic process
2.71 2.11e-10 GO:0000087 M phase of mitotic cell cycle
2.84 4.30e-10 GO:0071843 cellular component biogenesis at cellular level
1.94 4.41e-10 GO:0033554 cellular response to stress
2.69 8.41e-10 GO:0000280 nuclear division
2.69 8.41e-10 GO:0007067 mitosis
2.83 1.97e-09 GO:0022613 ribonucleoprotein complex biogenesis
2.33 2.55e-09 GO:0016568 chromatin modification
2.14 3.91e-09 GO:0044265 cellular macromolecule catabolic process
2.58 5.73e-09 GO:0048285 organelle fission
2.19 1.17e-08 GO:0006325 chromatin organization
2.77 1.30e-08 GO:0034470 ncRNA processing
1.68 2.10e-08 GO:0008104 protein localization
1.68 4.52e-08 GO:0010605 negative regulation of macromolecule metabolic process
1.67 4.57e-08 GO:0051641 cellular localization
3.09 5.42e-08 GO:0042254 ribosome biogenesis
1.99 6.22e-08 GO:0009057 macromolecule catabolic process
1.66 9.80e-08 GO:0044085 cellular component biogenesis
1.85 2.39e-07 GO:0046907 intracellular transport
1.58 3.94e-07 GO:0033036 macromolecule localization
1.60 1.11e-06 GO:0009892 negative regulation of metabolic process
3.32 1.12e-06 GO:0006364 rRNA processing
1.68 1.21e-06 GO:0051649 establishment of localization in cell
2.77 2.49e-06 GO:0051169 nuclear transport
3.22 2.80e-06 GO:0016072 rRNA metabolic process
2.28 4.27e-06 GO:0010608 posttranscriptional regulation of gene expression
2.76 4.45e-06 GO:0006913 nucleocytoplasmic transport
2.48 5.75e-06 GO:0016570 histone modification
3.38 8.89e-06 GO:0006403 RNA localization
2.44 1.01e-05 GO:0016569 covalent chromatin modification
2.32 1.39e-05 GO:0010564 regulation of cell cycle process
1.58 1.47e-05 GO:0031324 negative regulation of cellular metabolic process
3.38 1.62e-05 GO:0050657 nucleic acid transport
3.38 1.62e-05 GO:0050658 RNA transport
3.38 1.62e-05 GO:0051236 establishment of RNA localization
4.20 2.14e-05 GO:0006368 transcription elongation from RNA polymerase II promoter
2.47 2.99e-05 GO:0006730 one-carbon metabolic process
1.49 3.10e-05 GO:0010604 positive regulation of macromolecule metabolic process
1.63 3.71e-05 GO:0045184 establishment of protein localization
1.59 4.25e-05 GO:0051173 positive regulation of nitrogen compound metabolic process
1.48 4.80e-05 GO:0031325 positive regulation of cellular metabolic process
1.69 4.85e-05 GO:0010629 negative regulation of gene expression
3.08 5.37e-05 GO:0015931 nucleobase, nucleoside, nucleotide and nucleic acid transport
1.63 5.84e-05 GO:0015031 protein transport
2.78 5.84e-05 GO:0032259 methylation
2.93 6.17e-05 GO:0071156 regulation of cell cycle arrest
3.82 6.70e-05 GO:0006402 mRNA catabolic process
1.67 7.18e-05 GO:2000113 negative regulation of cellular macromolecule biosynthetic process
1.83 7.91e-05 GO:0051726 regulation of cell cycle
3.94 7.95e-05 GO:0006354 transcription elongation, DNA-dependent
1.59 8.78e-05 GO:0045935 positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2.88 1.02e-04 GO:0007059 chromosome segregation
1.65 1.05e-04 GO:0010558 negative regulation of macromolecule biosynthetic process
1.57 1.21e-04 GO:0010557 positive regulation of macromolecule biosynthetic process
1.62 1.21e-04 GO:0051254 positive regulation of RNA metabolic process
3.47 1.28e-04 GO:0006302 double-strand break repair
1.66 1.29e-04 GO:0045934 negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3.36 1.35e-04 GO:0051028 mRNA transport
2.87 1.85e-04 GO:0018205 peptidyl-lysine modification
2.87 1.85e-04 GO:0043414 macromolecule methylation
1.44 2.05e-04 GO:0009893 positive regulation of metabolic process
4.04 2.47e-04 GO:0000956 nuclear-transcribed mRNA catabolic process
1.98 2.52e-04 GO:0070647 protein modification by small protein conjugation or removal
1.64 2.94e-04 GO:0051172 negative regulation of nitrogen compound metabolic process
2.50 4.56e-04 GO:0006417 regulation of translation
2.01 5.12e-04 GO:0018193 peptidyl-amino acid modification
1.59 5.41e-04 GO:0045893 positive regulation of transcription, DNA-dependent
3.22 6.26e-04 GO:0006401 RNA catabolic process
1.59 6.43e-04 GO:0031327 negative regulation of cellular biosynthetic process
1.52 6.48e-04 GO:0031328 positive regulation of cellular biosynthetic process
1.77 6.94e-04 GO:0070727 cellular macromolecule localization
1.56 6.95e-04 GO:0010628 positive regulation of gene expression
1.58 7.30e-04 GO:0009890 negative regulation of biosynthetic process
2.86 8.52e-04 GO:0000075 cell cycle checkpoint
1.65 8.95e-04 GO:0051253 negative regulation of RNA metabolic process
3.60 9.84e-04 GO:0051168 nuclear export
1.76 1.04e-03 GO:0034613 cellular protein localization
1.50 1.10e-03 GO:0006357 regulation of transcription from RNA polymerase II promoter
1.50 1.25e-03 GO:0009891 positive regulation of biosynthetic process
2.49 1.65e-03 GO:0006366 transcription from RNA polymerase II promoter
1.62 2.68e-03 GO:0045892 negative regulation of transcription, DNA-dependent
8.45 2.72e-03 GO:0006303 double-strand break repair via nonhomologous end joining
4.02 3.19e-03 GO:0000819 sister chromatid segregation
2.59 3.20e-03 GO:0006399 tRNA metabolic process
1.31 3.56e-03 GO:0048523 negative regulation of cellular process
2.73 3.96e-03 GO:0043543 protein acylation
1.63 4.41e-03 GO:0071844 cellular component assembly at cellular level
7.02 4.78e-03 GO:0000726 non-recombinational repair
4.09 5.63e-03 GO:0000070 mitotic sister chromatid segregation
2.26 6.53e-03 GO:0006260 DNA replication
2.85 7.14e-03 GO:0006473 protein acetylation
2.98 8.54e-03 GO:0006352 transcription initiation, DNA-dependent
2.53 1.22e-02 GO:0006310 DNA recombination
1.89 1.31e-02 GO:0006511 ubiquitin-dependent protein catabolic process
1.82 1.31e-02 GO:0030163 protein catabolic process
1.87 1.48e-02 GO:0043632 modification-dependent macromolecule catabolic process
1.27 1.74e-02 GO:0048519 negative regulation of biological process
1.26 1.83e-02 GO:0048522 positive regulation of cellular process
2.86 1.83e-02 GO:0006475 internal protein amino acid acetylation
2.86 1.83e-02 GO:0018393 internal peptidyl-lysine acetylation
2.22 1.86e-02 GO:0031396 regulation of protein ubiquitination
2.08 2.09e-02 GO:0007346 regulation of mitotic cell cycle
1.89 2.27e-02 GO:0032446 protein modification by small protein conjugation
2.82 2.34e-02 GO:0006479 protein methylation
2.82 2.34e-02 GO:0008213 protein alkylation
2.82 2.34e-02 GO:0018394 peptidyl-lysine acetylation
3.92 2.34e-02 GO:0006405 RNA export from nucleus
2.60 2.43e-02 GO:0006414 translational elongation
1.83 2.54e-02 GO:0044257 cellular protein catabolic process
1.85 2.55e-02 GO:0019941 modification-dependent protein catabolic process
1.83 3.15e-02 GO:0051603 proteolysis involved in cellular protein catabolic process
1.24 3.31e-02 GO:0048518 positive regulation of biological process
6.76 3.38e-02 GO:0071044 histone mRNA catabolic process
1.45 3.70e-02 GO:0022607 cellular component assembly
2.80 4.23e-02 GO:0016573 histone acetylation

Gene overrepresentation in compartment category:

Enrichment   P-value GO Accession GO Term
1.43 6.36e-102 GO:0005622 intracellular
1.87 7.41e-102 GO:0005634 nucleus
1.57 3.11e-99 GO:0043231 intracellular membrane-bounded organelle
1.43 5.40e-99 GO:0044424 intracellular part
1.56 6.45e-99 GO:0043227 membrane-bounded organelle
1.51 1.06e-97 GO:0043229 intracellular organelle
1.50 5.19e-97 GO:0043226 organelle
2.30 9.78e-61 GO:0044428 nuclear part
1.75 4.41e-59 GO:0044446 intracellular organelle part
1.73 4.57e-58 GO:0044422 organelle part
2.18 4.21e-49 GO:0031974 membrane-enclosed lumen
2.30 9.60e-49 GO:0031981 nuclear lumen
2.19 2.13e-48 GO:0070013 intracellular organelle lumen
2.19 3.43e-48 GO:0043233 organelle lumen
1.72 4.75e-42 GO:0032991 macromolecular complex
2.37 6.78e-36 GO:0005654 nucleoplasm
1.32 1.03e-29 GO:0005737 cytoplasm
1.63 2.80e-26 GO:0043234 protein complex
1.67 1.74e-24 GO:0043228 non-membrane-bounded organelle
1.67 1.74e-24 GO:0043232 intracellular non-membrane-bounded organelle
1.13 5.73e-22 GO:0005623 cell
1.13 5.73e-22 GO:0044464 cell part
2.59 2.32e-21 GO:0030529 ribonucleoprotein complex
2.30 3.60e-21 GO:0044451 nucleoplasm part
2.46 2.43e-17 GO:0005694 chromosome
2.45 9.98e-16 GO:0044427 chromosomal part
2.35 4.58e-12 GO:0005730 nucleolus
1.27 1.99e-11 GO:0044444 cytoplasmic part
1.59 1.06e-10 GO:0005829 cytosol
2.53 2.96e-08 GO:0000785 chromatin
2.93 6.15e-08 GO:0000775 chromosome, centromeric region
2.61 9.36e-08 GO:0044454 nuclear chromosome part
2.47 1.62e-07 GO:0000228 nuclear chromosome
3.83 5.23e-07 GO:0000792 heterochromatin
2.99 7.67e-07 GO:0005819 spindle
2.57 9.10e-07 GO:0005840 ribosome
2.99 1.16e-05 GO:0000790 nuclear chromatin
3.41 1.70e-05 GO:0016591 DNA-directed RNA polymerase II, holoenzyme
2.59 2.90e-05 GO:0005681 spliceosomal complex
1.71 3.69e-05 GO:0015630 microtubule cytoskeleton
3.44 1.03e-04 GO:0034708 methyltransferase complex
3.44 1.03e-04 GO:0035097 histone methyltransferase complex
4.00 1.16e-04 GO:0000922 spindle pole
1.40 1.19e-04 GO:0005739 mitochondrion
3.02 1.35e-04 GO:0071013 catalytic step 2 spliceosome
2.43 2.44e-04 GO:0016604 nuclear body
4.14 3.58e-04 GO:0015934 large ribosomal subunit
3.17 4.90e-04 GO:0000123 histone acetyltransferase complex
2.81 6.17e-04 GO:0000776 kinetochore
1.84 1.85e-03 GO:0005667 transcription factor complex
4.83 1.41e-02 GO:0000428 DNA-directed RNA polymerase complex
4.83 1.41e-02 GO:0055029 nuclear DNA-directed RNA polymerase complex
1.97 1.68e-02 GO:0005635 nuclear envelope
1.93 1.76e-02 GO:0005813 centrosome
1.44 1.97e-02 GO:0012505 endomembrane system
4.57 2.43e-02 GO:0030880 RNA polymerase complex
2.50 2.88e-02 GO:0016585 chromatin remodeling complex
5.63 3.22e-02 GO:0005665 DNA-directed RNA polymerase II, core complex
8.04 3.34e-02 GO:0070419 nonhomologous end joining complex
3.30 3.50e-02 GO:0005720 nuclear heterochromatin
4.02 3.57e-02 GO:0044452 nucleolar part
1.83 3.92e-02 GO:0005815 microtubule organizing center
3.07 4.59e-02 GO:0005643 nuclear pore

Gene overrepresentation in function category:

Enrichment   P-value GO Accession GO Term
1.93 3.93e-50 GO:0003676 nucleic acid binding
2.56 2.44e-31 GO:0003723 RNA binding
1.24 6.88e-31 GO:0005488 binding
1.68 6.88e-22 GO:0000166 nucleotide binding
1.75 1.23e-21 GO:0003677 DNA binding
1.30 3.85e-13 GO:0003824 catalytic activity
1.27 1.34e-11 GO:0005515 protein binding
1.55 2.82e-11 GO:0035639 purine ribonucleoside triphosphate binding
1.54 5.54e-11 GO:0017076 purine nucleotide binding
1.54 5.90e-11 GO:0032555 purine ribonucleotide binding
1.53 6.33e-11 GO:0032553 ribonucleotide binding
1.57 1.32e-09 GO:0005524 ATP binding
1.56 1.41e-09 GO:0030554 adenyl nucleotide binding
1.56 1.49e-09 GO:0032559 adenyl ribonucleotide binding
1.68 3.77e-08 GO:0030528 transcription regulator activity
1.45 2.28e-07 GO:0016740 transferase activity
2.00 4.62e-07 GO:0016874 ligase activity
1.50 1.32e-06 GO:0008270 zinc ion binding
1.59 3.62e-06 GO:0016772 transferase activity, transferring phosphorus-containing groups
1.97 5.63e-05 GO:0016564 transcription repressor activity
2.24 6.62e-05 GO:0003682 chromatin binding
1.55 1.40e-04 GO:0019899 enzyme binding
1.38 1.93e-04 GO:0046914 transition metal ion binding
1.91 4.03e-04 GO:0008134 transcription factor binding
2.67 4.14e-04 GO:0016779 nucleotidyltransferase activity
1.97 1.22e-03 GO:0016879 ligase activity, forming carbon-nitrogen bonds
2.04 4.03e-03 GO:0043566 structure-specific DNA binding
2.39 4.48e-03 GO:0003735 structural constituent of ribosome
2.30 5.14e-03 GO:0004386 helicase activity
2.17 5.85e-03 GO:0008168 methyltransferase activity
1.53 6.69e-03 GO:0016462 pyrophosphatase activity
1.53 8.19e-03 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
1.52 8.76e-03 GO:0016817 hydrolase activity, acting on acid anhydrides
3.10 1.04e-02 GO:0008276 protein methyltransferase activity
2.11 1.05e-02 GO:0016741 transferase activity, transferring one-carbon groups
2.49 1.34e-02 GO:0008135 translation factor activity, nucleic acid binding
1.51 2.07e-02 GO:0017111 nucleoside-triphosphatase activity
1.45 2.80e-02 GO:0001071 nucleic acid binding transcription factor activity
1.45 2.80e-02 GO:0003700 sequence-specific DNA binding transcription factor activity
1.84 2.87e-02 GO:0003712 transcription cofactor activity
1.81 3.15e-02 GO:0019901 protein kinase binding
1.83 3.20e-02 GO:0000989 transcription factor binding transcription factor activity
1.86 3.21e-02 GO:0016881 acid-amino acid ligase activity
3.62 3.33e-02 GO:0034061 DNA polymerase activity
1.54 3.48e-02 GO:0019904 protein domain specific binding
2.57 3.92e-02 GO:0042393 histone binding
1.81 4.38e-02 GO:0000988 protein binding transcription factor activity
1.77 4.64e-02 GO:0016887 ATPase activity
8.04 4.71e-02 GO:0008327 methyl-CpG binding