mm9_v1_chr1_-_130488785_130488878	20.4222	AAGUGCU	Z80112|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	U59760|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	BC098322|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	AB000803|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	BC031665|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	Z80111|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	NM_009911|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	X99582|Cxcr4|12767|chemokine (C-X-C motif) receptor 4
mm9_v1_chr2_+_127161893_127161939	16.0492	AAGUGCU	AK088059|Dusp2|13537|dual specificity phosphatase 2	AK134067|Dusp2|13537|dual specificity phosphatase 2	NM_010090|Dusp2|13537|dual specificity phosphatase 2	BC048696|Dusp2|13537|dual specificity phosphatase 2	L11330|Dusp2|13537|dual specificity phosphatase 2
mm9_v1_chr2_+_179777187_179777250	13.6237	AAGUGCU	NM_178750|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	BC054730|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1	AK133944|Ss18l1|269397|synovial sarcoma translocation gene on chromosome 18-like 1
mm9_v1_chr10_+_96079634_96079769	13.1262	AAGUGCU	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chr12_+_72116953_72117066	12.5212	AAGUGCU	NM_001081195|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	BC025436|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	AK050594|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	AK087354|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	BC080780|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	BC058209|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)	AY116674|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr11_-_34597324_34597373	12.4134	AAGUGCU	AY027438|Dock2|94176|dedicator of cyto-kinesis 2	NM_033374|Dock2|94176|dedicator of cyto-kinesis 2
mm9_v1_chr4_+_135728188_135728308	12.1267	AAGUGCU	AK087452|E2f2|242705|E2F transcription factor 2	NM_177733|E2f2|242705|E2F transcription factor 2
mm9_v1_chr14_+_56223363_56223415	11.6248	AAGUGCU	BC012968|Irf9|16391|interferon regulatory factor 9	NM_001159418|Irf9|16391|interferon regulatory factor 9
mm9_v1_chr14_+_56222821_56222821	11.3972	AAGUGCU	NM_001159417|Irf9|16391|interferon regulatory factor 9	NM_008394|Irf9|16391|interferon regulatory factor 9
mm9_v1_chr3_-_30868320_30868353	11.179	AAGUGCU	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr13_+_41701584_41701584	11.0326	AAGUGCU	NM_001163572|Tmem170b|621976|transmembrane protein 170B
mm9_v1_chr8_-_73316331_73316346	10.9642	AAGUGCU	NM_199308|Mast3|546071|microtubule associated serine/threonine kinase 3	AK140821|Mast3|546071|microtubule associated serine/threonine kinase 3
mm9_v1_chr4_+_114732112_114732131	10.6678	AAGUGCU	AK144164|Tal1|21349|T-cell acute lymphocytic leukemia 1	M59764|Tal1|21349|T-cell acute lymphocytic leukemia 1	NM_011527|Tal1|21349|T-cell acute lymphocytic leukemia 1
mm9_v1_chr11_-_90252228_90252237	9.3108	AAGUGCU	NM_172563|Hlf|217082|hepatic leukemia factor
mm9_v1_chr12_+_85792371_85792472	9.00625	AAGUGCU	BC120496|Lin52|217708|lin-52 homolog (C. elegans)	BC137693|Lin52|217708|lin-52 homolog (C. elegans)	AK030923|Lin52|217708|lin-52 homolog (C. elegans)	NM_173756|Lin52|217708|lin-52 homolog (C. elegans)
mm9_v1_chr4_-_133443662_133443718	8.99495	AAGUGCU	BC049076|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	BC094470|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	M28489|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	AK148208|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	NM_009097|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1
mm9_v1_chr4_+_135841981_135841996	8.81942	AAGUGCU	AK053652|Zfp46|22704|zinc finger protein 46	NM_009557|Zfp46|22704|zinc finger protein 46	AK173240|Zfp46|22704|zinc finger protein 46
mm9_v1_chr2_-_131855722_131855755	8.76029	AAGUGCU	NM_175445|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr9_+_122026378_122026421	8.25726	AAGUGCU	NM_001164572|Snrk|20623|SNF related kinase	NM_133741|Snrk|20623|SNF related kinase
mm9_v1_chr17_+_26852581_26852657	8.13322	AAGUGCU	AK030092|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	NM_029870|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK044760|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK020796|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132423|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132454|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr9_-_44689356_44689381	8.01426	AAGUGCU	NM_001081049|Mll1|214162|myeloid/lymphoid or mixed-lineage leukemia 1
mm9_v1_chr11_-_86807216_86807263	7.36504	AAGUGCU	NM_001005341|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr1_+_179374783_179374796	7.30417	AAGUGCU	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr19_-_14672472_14672537	7.29451	AAGUGCU	AK017548|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	NM_011600|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr18_-_46358466_46358474	7.22711	AAGUGCU	NM_001170855|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr10_-_30522912_30522956	7.21869	AAGUGCU	NM_172495|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr17_+_25325344_25325353	7.16848	AAGUGCU	NM_001197024|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chr5_-_44617844_44617920	7.09966	AAGUGCU	NM_173764|Tapt1|231225|transmembrane anterior posterior transformation 1
mm9_v1_chr2_-_31939210_31939226	7.01213	AAGUGCU	AK079514|Fam78a|241303|family with sequence similarity 78, member A	NM_175511|Fam78a|241303|family with sequence similarity 78, member A	AK077626|Fam78a|241303|family with sequence similarity 78, member A
mm9_v1_chr1_-_69732373_69732533	6.93071	AAGUGCU	BC138606|Ikzf2|22779|IKAROS family zinc finger 2	BC138608|Ikzf2|22779|IKAROS family zinc finger 2	AK047925|Ikzf2|22779|IKAROS family zinc finger 2	AF044257|Ikzf2|22779|IKAROS family zinc finger 2	NM_011770|Ikzf2|22779|IKAROS family zinc finger 2
mm9_v1_chr5_+_37442095_37442154	6.86775	AAGUGCU	NM_178394|Jakmip1|76071|janus kinase and microtubule interacting protein 1	AK077298|Jakmip1|76071|janus kinase and microtubule interacting protein 1	AK143621|Jakmip1|76071|janus kinase and microtubule interacting protein 1
mm9_v1_chr11_-_70501586_70501625	6.72157	AAGUGCU	NM_001190376|Camta2|216874|calmodulin binding transcription activator 2	NM_001190378|Camta2|216874|calmodulin binding transcription activator 2	NM_001190379|Camta2|216874|calmodulin binding transcription activator 2	NM_178116|Camta2|216874|calmodulin binding transcription activator 2
mm9_v1_chr18_+_51277551_51277576	6.66339	AAGUGCU	BC132481|Prr16|71373|proline rich 16	NM_001081224|Prr16|71373|proline rich 16	AK081911|Prr16|71373|proline rich 16
mm9_v1_chr2_-_18919637_18919800	6.63428	AAGUGCU	AK040558|Pip4k2a|18718|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	BC011097|Pip4k2a|18718|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	AK012196|Pip4k2a|18718|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	NM_008845|Pip4k2a|18718|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm9_v1_chr16_-_23988680_23988725	6.52957	AAGUGCU	D38377|Bcl6|12053|B-cell leukemia/lymphoma 6	BC052315|Bcl6|12053|B-cell leukemia/lymphoma 6	NM_009744|Bcl6|12053|B-cell leukemia/lymphoma 6	AK039228|Bcl6|12053|B-cell leukemia/lymphoma 6	AK036975|Bcl6|12053|B-cell leukemia/lymphoma 6	AK151229|Bcl6|12053|B-cell leukemia/lymphoma 6
mm9_v1_chr10_+_40069113_40069226	6.41952	AAGUGCU	AK122421|Cdk19|78334|cyclin-dependent kinase 19	NM_001168304|Cdk19|78334|cyclin-dependent kinase 19	NM_198164|Cdk19|78334|cyclin-dependent kinase 19	AK053651|Cdk19|78334|cyclin-dependent kinase 19	BC137614|Cdk19|78334|cyclin-dependent kinase 19	BC144782|Cdk19|78334|cyclin-dependent kinase 19	BC080280|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr18_+_32322742_32322855	6.40336	AAGUGCU	AK036364|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	NM_011946|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK143367|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK050667|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	U43186|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2
mm9_v1_chr3_+_60305108_60305212	6.3956	AAGUGCU	AK162039|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK149405|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AB093240|Mbnl1|56758|muscleblind-like 1 (Drosophila)	NM_020007|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK088871|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK153848|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC060031|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC096600|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr5_-_64360058_64360140	6.39307	AAGUGCU	AK133845|Rell1|100532|RELT-like 1	AK159944|Rell1|100532|RELT-like 1	AK161061|Rell1|100532|RELT-like 1	BC031198|Rell1|100532|RELT-like 1	BC066137|Rell1|100532|RELT-like 1	BC066160|Rell1|100532|RELT-like 1	AK140108|Rell1|100532|RELT-like 1	NM_145923|Rell1|100532|RELT-like 1
mm9_v1_chr11_+_60351159_60351225	6.31403	AAGUGCU	NM_172943|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)
mm9_v1_chr6_-_90760116_90760132	6.20475	AAGUGCU	NM_001134384|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr6_-_90666474_90666531	6.08069	AAGUGCU	NM_001134383|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr13_-_112599181_112599204	6.01249	AAGUGCU	AB014614|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	AF117340|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	NM_011945|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1
mm9_v1_chr3_+_28162135_28162218	5.85852	AAGUGCU	BC050866|Tnik|665113|TRAF2 and NCK interacting kinase	BC050868|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163007|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163008|Tnik|665113|TRAF2 and NCK interacting kinase	NM_001163009|Tnik|665113|TRAF2 and NCK interacting kinase	NM_026910|Tnik|665113|TRAF2 and NCK interacting kinase	AK041777|Tnik|665113|TRAF2 and NCK interacting kinase	AK133568|Tnik|665113|TRAF2 and NCK interacting kinase	AK039113|Tnik|665113|TRAF2 and NCK interacting kinase
mm9_v1_chr5_-_138125817_138125859	5.85248	AAGUGCU	BC046788|Agfg2|231801|ArfGAP with FG repeats 2	NM_178162|Agfg2|231801|ArfGAP with FG repeats 2
mm9_v1_chr13_+_83643032_83643032	5.85083	AAGUGCU	NM_001170537|Mef2c|17260|myocyte enhancer factor 2C	NM_025282|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr6_-_116578970_116579010	5.81883	AAGUGCU	AK152681|Zfp422|67255|zinc finger protein 422	AK082970|Zfp422|67255|zinc finger protein 422	NM_026057|Zfp422|67255|zinc finger protein 422
mm9_v1_chr10_+_42398721_42398783	5.77523	AAGUGCU	AK044897|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AF533890|Ostm1|14628|osteopetrosis associated transmembrane protein 1	NM_172416|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK004546|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK050513|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK053664|Ostm1|14628|osteopetrosis associated transmembrane protein 1	BC057635|Ostm1|14628|osteopetrosis associated transmembrane protein 1
mm9_v1_chr17_-_51951378_51951378	5.68909	AAGUGCU	AK158518|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163630|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr9_+_59598963_59599005	5.67708	AAGUGCU	NM_173018|Myo9a|270163|myosin IXa	AK048681|Myo9a|270163|myosin IXa
mm9_v1_chr5_+_139856534_139856673	5.6585	AAGUGCU	AK155280|Gpr146|80290|G protein-coupled receptor 146	AK154478|Gpr146|80290|G protein-coupled receptor 146	AK046512|Gpr146|80290|G protein-coupled receptor 146	AK089232|Gpr146|80290|G protein-coupled receptor 146	AK154708|Gpr146|80290|G protein-coupled receptor 146	AK155876|Gpr146|80290|G protein-coupled receptor 146	NM_030258|Gpr146|80290|G protein-coupled receptor 146	BC003323|Gpr146|80290|G protein-coupled receptor 146	AK050034|Gpr146|80290|G protein-coupled receptor 146	AK087100|Gpr146|80290|G protein-coupled receptor 146	AK155212|Gpr146|80290|G protein-coupled receptor 146
mm9_v1_chr17_-_51971946_51971971	5.62472	AAGUGCU	AK088563|Satb1|20230|special AT-rich sequence binding protein 1	AK134040|Satb1|20230|special AT-rich sequence binding protein 1	U05252|Satb1|20230|special AT-rich sequence binding protein 1	AK037740|Satb1|20230|special AT-rich sequence binding protein 1	NM_009122|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr17_-_51965912_51965912	5.62149	AAGUGCU	NM_001163631|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr17_-_51972514_51972614	5.59049	AAGUGCU	BC011132|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163632|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr9_+_7764067_7764207	5.57229	AAGUGCU	NM_133739|Tmem123|71929|transmembrane protein 123	AK162610|Tmem123|71929|transmembrane protein 123	AK151044|Tmem123|71929|transmembrane protein 123	AK155767|Tmem123|71929|transmembrane protein 123	AK157001|Tmem123|71929|transmembrane protein 123	AK165671|Tmem123|71929|transmembrane protein 123	AK170823|Tmem123|71929|transmembrane protein 123	BC086319|Tmem123|71929|transmembrane protein 123	BC010292|Tmem123|71929|transmembrane protein 123	AK152180|Tmem123|71929|transmembrane protein 123	AK153539|Tmem123|71929|transmembrane protein 123	AK150361|Tmem123|71929|transmembrane protein 123	AK172352|Tmem123|71929|transmembrane protein 123	AK172553|Tmem123|71929|transmembrane protein 123	AK172701|Tmem123|71929|transmembrane protein 123	AK150365|Tmem123|71929|transmembrane protein 123	AK152423|Tmem123|71929|transmembrane protein 123	AK153122|Tmem123|71929|transmembrane protein 123	AK153378|Tmem123|71929|transmembrane protein 123	AK166444|Tmem123|71929|transmembrane protein 123
mm9_v1_chr11_+_97524725_97524725	5.56547	AAGUGCU	NM_139311|Mllt6|246198|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm9_v1_chr2_+_173485260_173485380	5.56474	AAGUGCU	AK147619|Rab22a|19334|RAB22A, member RAS oncogene family	AK150617|Rab22a|19334|RAB22A, member RAS oncogene family	AK146594|Rab22a|19334|RAB22A, member RAS oncogene family	NM_024436|Rab22a|19334|RAB22A, member RAS oncogene family	AK021398|Rab22a|19334|RAB22A, member RAS oncogene family	AK149200|Rab22a|19334|RAB22A, member RAS oncogene family	BC006596|Rab22a|19334|RAB22A, member RAS oncogene family	AK014407|Rab22a|19334|RAB22A, member RAS oncogene family	AK031667|Rab22a|19334|RAB22A, member RAS oncogene family
mm9_v1_chr17_+_25359526_25359671	5.55495	AAGUGCU	AK004898|Unkl|74154|unkempt-like (Drosophila)	NM_028789|Unkl|74154|unkempt-like (Drosophila)	BC150842|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chr9_-_123760992_123761028	5.52908	AAGUGCU	AK081259|Fyco1|17281|FYVE and coiled-coil domain containing 1	AK013060|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_001110253|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr17_-_31992708_31992780	5.5256	AAGUGCU	U11494|Sik1|17691|salt inducible kinase 1	AK141817|Sik1|17691|salt inducible kinase 1	NM_010831|Sik1|17691|salt inducible kinase 1	AK172427|Sik1|17691|salt inducible kinase 1
mm9_v1_chr4_-_128483355_128483429	5.50247	AAGUGCU	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr8_+_85387234_85387370	5.49819	AAGUGCU	AK032722|Rnf150|330812|ring finger protein 150	AK041412|Rnf150|330812|ring finger protein 150	NM_177378|Rnf150|330812|ring finger protein 150	AK220374|Rnf150|330812|ring finger protein 150
mm9_v1_chr6_-_28211600_28211600	5.49228	AAGUGCU	BC119236|Zfp800|627049|zinc finger protein 800	BC119262|Zfp800|627049|zinc finger protein 800	BC144761|Zfp800|627049|zinc finger protein 800	NM_001081678|Zfp800|627049|zinc finger protein 800
mm9_v1_chr11_+_70376359_70376411	5.48738	AAGUGCU	NM_001045959|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_001045964|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_016713|Mink1|50932|misshapen-like kinase 1 (zebrafish)	NM_176893|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB035697|Mink1|50932|misshapen-like kinase 1 (zebrafish)	AB041925|Mink1|50932|misshapen-like kinase 1 (zebrafish)
mm9_v1_chrX_-_48559008_48559019	5.3298	AAGUGCU	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chr6_+_92041408_92041534	5.30765	AAGUGCU	NM_011630|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2	AK157305|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2
mm9_v1_chr5_+_139865857_139865857	5.29882	AAGUGCU	AK137454|Gpr146|80290|G protein-coupled receptor 146	NM_001038703|Gpr146|80290|G protein-coupled receptor 146
mm9_v1_chrX_-_9046362_9046456	5.28387	AAGUGCU	U43384|Cybb|13058|cytochrome b-245, beta polypeptide	AK033570|Cybb|13058|cytochrome b-245, beta polypeptide	AK053920|Cybb|13058|cytochrome b-245, beta polypeptide	AK079926|Cybb|13058|cytochrome b-245, beta polypeptide	BC071229|Cybb|13058|cytochrome b-245, beta polypeptide	BC042838|Cybb|13058|cytochrome b-245, beta polypeptide	AK152257|Cybb|13058|cytochrome b-245, beta polypeptide	AK153154|Cybb|13058|cytochrome b-245, beta polypeptide	AK153259|Cybb|13058|cytochrome b-245, beta polypeptide	AK171526|Cybb|13058|cytochrome b-245, beta polypeptide	FJ168469|Cybb|13058|cytochrome b-245, beta polypeptide	AK154126|Cybb|13058|cytochrome b-245, beta polypeptide	NM_007807|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr12_-_109241423_109241623	5.23308	AAGUGCU	BC019503|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AF186019|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AK088219|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043551|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043553|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043583|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_001079883|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_021399|Bcl11b|58208|B-cell leukemia/lymphoma 11B
mm9_v1_chr7_-_71083734_71083823	5.17554	AAGUGCU	AJ245644|Klf13|50794|Kruppel-like factor 13	AJ275987|Klf13|50794|Kruppel-like factor 13	BC051557|Klf13|50794|Kruppel-like factor 13	AK155298|Klf13|50794|Kruppel-like factor 13	AF251796|Klf13|50794|Kruppel-like factor 13	NM_021366|Klf13|50794|Kruppel-like factor 13
mm9_v1_chr11_-_4494815_4494822	5.07766	AAGUGCU	NM_028860|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr16_-_92697567_92697590	5.05779	AAGUGCU	AK155262|Runx1|12394|runt related transcription factor 1	D26532|Runx1|12394|runt related transcription factor 1	NM_001111023|Runx1|12394|runt related transcription factor 1	NM_009821|Runx1|12394|runt related transcription factor 1
mm9_v1_chr1_+_132613903_132614127	5.02772	AAGUGCU	AK036938|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK036991|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	NM_178691|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	BC139034|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK044678|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	BC099948|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK053730|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm9_v1_chr16_+_55973916_55973970	4.99796	AAGUGCU	NM_173026|Zbtb11|271377|zinc finger and BTB domain containing 11
mm9_v1_chr12_-_119539909_119539930	4.99735	AAGUGCU	NM_001166385|Sp4|20688|trans-acting transcription factor 4	NM_009239|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr3_+_103718042_103718073	4.95877	AAGUGCU	AB101658|Rsbn1|229675|rosbin, round spermatid basic protein 1	NM_172684|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139213|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139215|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chr18_-_46372017_46372260	4.90176	AAGUGCU	AY251389|Trim36|28105|tripartite motif-containing 36	AB103063|Trim36|28105|tripartite motif-containing 36	BC058106|Trim36|28105|tripartite motif-containing 36	NM_178872|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr3_+_88769733_88769733	4.87355	AAGUGCU	NM_138679|Ash1l|192195|ash1 (absent, small, or homeotic)-like (Drosophila)
mm9_v1_chr15_+_100446018_100446129	4.82579	AAGUGCU	AK002595|Dazap2|23994|DAZ associated protein 2	AK145398|Dazap2|23994|DAZ associated protein 2	AK146970|Dazap2|23994|DAZ associated protein 2	L10906|Dazap2|23994|DAZ associated protein 2	AK088916|Dazap2|23994|DAZ associated protein 2	AK132139|Dazap2|23994|DAZ associated protein 2	AK137246|Dazap2|23994|DAZ associated protein 2	BC014808|Dazap2|23994|DAZ associated protein 2	NM_011873|Dazap2|23994|DAZ associated protein 2	BC083347|Dazap2|23994|DAZ associated protein 2	AF085348|Dazap2|23994|DAZ associated protein 2
mm9_v1_chr1_-_90598670_90598781	4.80456	AAGUGCU	AK080335|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080380|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080743|Arl4c|320982|ADP-ribosylation factor-like 4C	BC055769|Arl4c|320982|ADP-ribosylation factor-like 4C	NM_177305|Arl4c|320982|ADP-ribosylation factor-like 4C
mm9_v1_chr4_+_105988790_105988840	4.79754	AAGUGCU	NM_183225|Usp24|329908|ubiquitin specific peptidase 24	AK045043|Usp24|329908|ubiquitin specific peptidase 24
mm9_v1_chr11_-_5344795_5344912	4.73753	AAGUGCU	AK163639|Znrf3|407821|zinc and ring finger 3	NM_001080924|Znrf3|407821|zinc and ring finger 3
mm9_v1_chr14_-_46277816_46277821	4.7161	AAGUGCU	DQ272481|Ddhd1|114874|DDHD domain containing 1	DQ272482|Ddhd1|114874|DDHD domain containing 1	NM_001039106|Ddhd1|114874|DDHD domain containing 1	NM_001042719|Ddhd1|114874|DDHD domain containing 1	NM_176845|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr2_-_37286367_37286438	4.70991	AAGUGCU	BC032933|Zbtb6|241322|zinc finger and BTB domain containing 6	AK044125|Zbtb6|241322|zinc finger and BTB domain containing 6	AK050827|Zbtb6|241322|zinc finger and BTB domain containing 6	NM_146253|Zbtb6|241322|zinc finger and BTB domain containing 6
mm9_v1_chr6_-_83391623_83391671	4.69932	AAGUGCU	AK044758|Tet3|194388|tet oncogene family member 3	AK046543|Tet3|194388|tet oncogene family member 3	AK046552|Tet3|194388|tet oncogene family member 3	AK046553|Tet3|194388|tet oncogene family member 3	NM_183138|Tet3|194388|tet oncogene family member 3
mm9_v1_chr4_-_154010868_154010981	4.69086	AAGUGCU	AB078338|Prdm16|70673|PR domain containing 16	AK083829|Prdm16|70673|PR domain containing 16	BC053082|Prdm16|70673|PR domain containing 16	BC059838|Prdm16|70673|PR domain containing 16	NM_001177995|Prdm16|70673|PR domain containing 16	NM_027504|Prdm16|70673|PR domain containing 16
mm9_v1_chr13_-_54150991_54151026	4.69021	AAGUGCU	AK044723|Drd1a|13488|dopamine receptor D1A	NM_010076|Drd1a|13488|dopamine receptor D1A
mm9_v1_chr11_+_117515548_117515602	4.67979	AAGUGCU	NM_198022|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr11_-_69761489_69761691	4.66994	AAGUGCU	AB008453|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	M23383|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	BC014282|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK138832|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK164310|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK137607|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK160882|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	NM_009204|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4
mm9_v1_chr2_-_153067043_153067211	4.60726	AAGUGCU	BC037664|Plagl2|54711|pleiomorphic adenoma gene-like 2	BC078453|Plagl2|54711|pleiomorphic adenoma gene-like 2	NM_018807|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK040626|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK133833|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK141713|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK150243|Plagl2|54711|pleiomorphic adenoma gene-like 2	AK129087|Plagl2|54711|pleiomorphic adenoma gene-like 2
mm9_v1_chr8_+_3393005_3393067	4.54004	AAGUGCU	AK041423|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	NM_133962|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	BC060639|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	AK147923|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18
mm9_v1_chr13_+_112476313_112476385	4.53319	AAGUGCU	AK147427|Mier3|218613|mesoderm induction early response 1, family member 3	NM_172593|Mier3|218613|mesoderm induction early response 1, family member 3
mm9_v1_chr6_+_122770201_122770233	4.50367	AAGUGCU	AF253052|Foxj2|60611|forkhead box J2	NM_021899|Foxj2|60611|forkhead box J2	BC038069|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr17_-_43803963_43804162	4.46599	AAGUGCU	AK014394|Slc25a27|74011|solute carrier family 25, member 27	NM_028711|Slc25a27|74011|solute carrier family 25, member 27	BC138993|Slc25a27|74011|solute carrier family 25, member 27	BC138994|Slc25a27|74011|solute carrier family 25, member 27	AB106930|Slc25a27|74011|solute carrier family 25, member 27	AK021314|Slc25a27|74011|solute carrier family 25, member 27	AK043831|Slc25a27|74011|solute carrier family 25, member 27
mm9_v1_chr1_+_133904162_133904241	4.45779	AAGUGCU	NM_007923|Elk4|13714|ELK4, member of ETS oncogene family	AK156537|Elk4|13714|ELK4, member of ETS oncogene family
mm9_v1_chr6_+_91937103_91937154	4.40349	AAGUGCU	NM_172731|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5	BC145502|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5	BC150786|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5
mm9_v1_chr19_-_4397075_4397085	4.36365	AAGUGCU	AK037157|Kdm2a|225876|lysine (K)-specific demethylase 2A	AK161980|Kdm2a|225876|lysine (K)-specific demethylase 2A	NM_001001984|Kdm2a|225876|lysine (K)-specific demethylase 2A	AK155866|Kdm2a|225876|lysine (K)-specific demethylase 2A
mm9_v1_chr11_+_69579376_69579461	4.35812	AAGUGCU	AK163593|Zbtb4|75580|zinc finger and BTB domain containing 4	NM_029348|Zbtb4|75580|zinc finger and BTB domain containing 4	AK147212|Zbtb4|75580|zinc finger and BTB domain containing 4
mm9_v1_chr10_-_30375572_30375672	4.34332	AAGUGCU	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr6_-_39370351_39370385	4.31797	AAGUGCU	BC003329|Mkrn1|54484|makorin, ring finger protein, 1	AK077060|Mkrn1|54484|makorin, ring finger protein, 1	NM_018810|Mkrn1|54484|makorin, ring finger protein, 1	AF192785|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr1_+_179375951_179375951	4.28714	AAGUGCU	AF140224|Zfp238|30928|zinc finger protein 238	NM_013915|Zfp238|30928|zinc finger protein 238
mm9_v1_chr11_-_103128675_103128714	4.2671	AAGUGCU	BC107015|Map3k14|53859|mitogen-activated protein kinase kinase kinase 14	AK172518|Map3k14|53859|mitogen-activated protein kinase kinase kinase 14	AK036200|Map3k14|53859|mitogen-activated protein kinase kinase kinase 14	NM_016896|Map3k14|53859|mitogen-activated protein kinase kinase kinase 14
mm9_v1_chr2_+_127951773_127951787	4.19101	AAGUGCU	AK031285|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK037885|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK150464|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK152472|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK153542|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK162975|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_009754|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207680|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207681|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK082613|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	BC019556|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK011490|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK050192|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr1_+_66515003_66515020	4.18283	AAGUGCU	AK043914|Unc80|329178|unc-80 homolog (C. elegans)	FJ210934|Unc80|329178|unc-80 homolog (C. elegans)	NM_175510|Unc80|329178|unc-80 homolog (C. elegans)
mm9_v1_chr13_+_43493729_43493803	4.07352	AAGUGCU	NM_023554|Nol7|70078|nucleolar protein 7	AK008670|Nol7|70078|nucleolar protein 7	AK019972|Nol7|70078|nucleolar protein 7	AB041566|Nol7|70078|nucleolar protein 7	AK032963|Nol7|70078|nucleolar protein 7	BC130012|Nol7|70078|nucleolar protein 7	BC090637|Nol7|70078|nucleolar protein 7
mm9_v1_chr10_+_127896244_127896376	4.04228	AAGUGCU	NM_001114096|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001114097|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_198160|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC058720|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK089461|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK170530|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK146971|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC040363|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm9_v1_chr11_-_88922061_88922089	4.04043	AAGUGCU	AK147841|Dgke|56077|diacylglycerol kinase, epsilon	NM_019505|Dgke|56077|diacylglycerol kinase, epsilon
mm9_v1_chr16_-_32079317_32079415	3.99835	AAGUGCU	BC086650|Pak2|224105|p21 protein (Cdc42/Rac)-activated kinase 2	NM_177326|Pak2|224105|p21 protein (Cdc42/Rac)-activated kinase 2
mm9_v1_chr4_-_45024999_45025283	3.95955	AAGUGCU	AK160003|Zbtb5|230119|zinc finger and BTB domain containing 5	BC054551|Zbtb5|230119|zinc finger and BTB domain containing 5	AK031172|Zbtb5|230119|zinc finger and BTB domain containing 5	AY635051|Zbtb5|230119|zinc finger and BTB domain containing 5	BC057545|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163283|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_001163284|Zbtb5|230119|zinc finger and BTB domain containing 5	NM_173399|Zbtb5|230119|zinc finger and BTB domain containing 5
mm9_v1_chr4_-_44181148_44181210	3.9516	AAGUGCU	AK044324|Rnf38|73469|ring finger protein 38	NM_001038993|Rnf38|73469|ring finger protein 38	AK147608|Rnf38|73469|ring finger protein 38
mm9_v1_chr2_+_22924561_22924686	3.93867	AAGUGCU	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr5_-_25004598_25004626	3.90631	AAGUGCU	AK044828|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3	NM_001081383|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3	AK087368|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3
mm9_v1_chr19_-_47766512_47766583	3.90052	AAGUGCU	BC125031|Col17a1|12821|collagen, type XVII, alpha 1	BC125032|Col17a1|12821|collagen, type XVII, alpha 1	NM_007732|Col17a1|12821|collagen, type XVII, alpha 1	L08407|Col17a1|12821|collagen, type XVII, alpha 1
mm9_v1_chr17_+_27110101_27110235	3.86028	AAGUGCU	BC049933|Zbtb9|474156|zinc finger and BTB domain containing 9	NM_001005916|Zbtb9|474156|zinc finger and BTB domain containing 9	AK154850|Zbtb9|474156|zinc finger and BTB domain containing 9	AK030262|Zbtb9|474156|zinc finger and BTB domain containing 9
mm9_v1_chr13_-_8870975_8870975	3.73221	AAGUGCU	NM_001039388|Wdr37|207615|WD repeat domain 37
mm9_v1_chr3_+_58810899_58810899	3.71327	AAGUGCU	AK047743|Med12l|329650|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like	NM_177855|Med12l|329650|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm9_v1_chr8_+_23970006_23970020	3.70404	AAGUGCU	AK028058|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK082463|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001081149|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK039615|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK036885|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK054322|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK132474|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK143408|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3
mm9_v1_chr15_+_80541675_80541764	3.61896	AAGUGCU	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chrX_+_126284271_126284381	3.61175	AAGUGCU	AK153986|Diap2|54004|diaphanous homolog 2 (Drosophila)	NM_172493|Diap2|54004|diaphanous homolog 2 (Drosophila)	AK088648|Diap2|54004|diaphanous homolog 2 (Drosophila)	AY312280|Diap2|54004|diaphanous homolog 2 (Drosophila)	BC100759|Diap2|54004|diaphanous homolog 2 (Drosophila)
mm9_v1_chr13_-_8870231_8870293	3.60758	AAGUGCU	AK129254|Wdr37|207615|WD repeat domain 37	AK032582|Wdr37|207615|WD repeat domain 37	AK146209|Wdr37|207615|WD repeat domain 37	AK014128|Wdr37|207615|WD repeat domain 37	AK044740|Wdr37|207615|WD repeat domain 37	AK036203|Wdr37|207615|WD repeat domain 37	NM_001039389|Wdr37|207615|WD repeat domain 37	NM_172445|Wdr37|207615|WD repeat domain 37
mm9_v1_chr1_-_34899878_34899900	3.60683	AAGUGCU	AK220453|Fam168b|214469|family with sequence similarity 168, member B	NM_001160235|Fam168b|214469|family with sequence similarity 168, member B	NM_001160236|Fam168b|214469|family with sequence similarity 168, member B	NM_174997|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr2_+_32390780_32390878	3.60352	AAGUGCU	AK131145|Fam102a|98952|family with sequence similarity 102, member A	AK170536|Fam102a|98952|family with sequence similarity 102, member A	AK049032|Fam102a|98952|family with sequence similarity 102, member A	NM_153560|Fam102a|98952|family with sequence similarity 102, member A
mm9_v1_chr4_-_126145660_126145664	3.58108	AAGUGCU	BC129915|Eif2c1|236511|eukaryotic translation initiation factor 2C, 1	AB081471|Eif2c1|236511|eukaryotic translation initiation factor 2C, 1	BC129914|Eif2c1|236511|eukaryotic translation initiation factor 2C, 1	NM_153403|Eif2c1|236511|eukaryotic translation initiation factor 2C, 1
mm9_v1_chr4_-_131978279_131978374	3.56559	AAGUGCU	BC096033|Phactr4|100169|phosphatase and actin regulator 4	AK049209|Phactr4|100169|phosphatase and actin regulator 4	BC075672|Phactr4|100169|phosphatase and actin regulator 4	AK220496|Phactr4|100169|phosphatase and actin regulator 4	NM_001161797|Phactr4|100169|phosphatase and actin regulator 4	NM_175306|Phactr4|100169|phosphatase and actin regulator 4
mm9_v1_chr2_+_75670230_75670233	3.55622	AAGUGCU	AK031049|Agps|228061|alkylglycerone phosphate synthase	NM_172666|Agps|228061|alkylglycerone phosphate synthase
mm9_v1_chr9_+_57385317_57385465	3.55229	AAGUGCU	AK028365|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_001166364|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_175273|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC111883|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC112403|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene
mm9_v1_chr5_+_148242018_148242155	3.53392	AAGUGCU	NM_028291|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr19_+_40905768_40905801	3.52881	AAGUGCU	AK052506|Ccnj|240665|cyclin J	NM_172839|Ccnj|240665|cyclin J	AK157841|Ccnj|240665|cyclin J	BC120921|Ccnj|240665|cyclin J	BC120922|Ccnj|240665|cyclin J	BC117559|Ccnj|240665|cyclin J
mm9_v1_chr9_-_123760686_123760944	3.47678	AAGUGCU	AJ428065|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_148925|Fyco1|17281|FYVE and coiled-coil domain containing 1	BC053712|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr14_+_58691522_58691522	3.46541	AAGUGCU	AK158782|Fgf9|14180|fibroblast growth factor 9	NM_013518|Fgf9|14180|fibroblast growth factor 9
mm9_v1_chr2_-_33323966_33324113	3.46086	AAGUGCU	AK206442|Zbtb43|71834|zinc finger and BTB domain containing 43	AK212293|Zbtb43|71834|zinc finger and BTB domain containing 43	AK122277|Zbtb43|71834|zinc finger and BTB domain containing 43	AK005818|Zbtb43|71834|zinc finger and BTB domain containing 43	AK147806|Zbtb43|71834|zinc finger and BTB domain containing 43	BC043117|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_001025594|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_027947|Zbtb43|71834|zinc finger and BTB domain containing 43
mm9_v1_chr9_-_42280256_42280323	3.44097	AAGUGCU	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr14_+_49065971_49066097	3.42839	AAGUGCU	AK141246|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	NM_172600|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK032809|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK054494|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK040456|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK153648|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK038175|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene
mm9_v1_chr3_+_95462640_95462703	3.42147	AAGUGCU	NM_008562|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr7_-_74517624_74517743	3.41875	AAGUGCU	AK132678|Mef2a|17258|myocyte enhancer factor 2A	BC019116|Mef2a|17258|myocyte enhancer factor 2A	BC096598|Mef2a|17258|myocyte enhancer factor 2A	BC061128|Mef2a|17258|myocyte enhancer factor 2A	AK052385|Mef2a|17258|myocyte enhancer factor 2A	AK153751|Mef2a|17258|myocyte enhancer factor 2A	NM_001033713|Mef2a|17258|myocyte enhancer factor 2A
mm9_v1_chr14_+_104049453_104049469	3.41013	AAGUGCU	BC079866|Slain1|105439|SLAIN motif family, member 1	NM_198014|Slain1|105439|SLAIN motif family, member 1
mm9_v1_chr9_-_51976215_51976215	3.39943	AAGUGCU	NM_001162921|Zc3h12c|244871|zinc finger CCCH type containing 12C
mm9_v1_chr2_-_7317824_7317824	3.39856	AAGUGCU	AK160861|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110231|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr2_+_22923653_22923769	3.36871	AAGUGCU	NM_001102436|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_028793|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK050450|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC090641|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chrX_+_165233030_165233030	3.3484	AAGUGCU	AK164501|Arhgap6|11856|Rho GTPase activating protein 6	AK171677|Arhgap6|11856|Rho GTPase activating protein 6	NM_009707|Arhgap6|11856|Rho GTPase activating protein 6
mm9_v1_chr17_-_88464582_88464624	3.31723	AAGUGCU	BC117884|Fbxo11|225055|F-box protein 11	BC117885|Fbxo11|225055|F-box protein 11	BC128479|Fbxo11|225055|F-box protein 11	NM_001081034|Fbxo11|225055|F-box protein 11
mm9_v1_chr5_-_138705172_138705284	3.295	AAGUGCU	AK138960|BC037034|231807|cDNA sequence BC037034	AK046882|BC037034|231807|cDNA sequence BC037034	NM_153161|BC037034|231807|cDNA sequence BC037034
mm9_v1_chrX_-_152057864_152057869	3.20388	AAGUGCU	BC116313|Ptchd1|211612|patched domain containing 1	BC116312|Ptchd1|211612|patched domain containing 1	NM_001093750|Ptchd1|211612|patched domain containing 1
mm9_v1_chr11_+_95198329_95198359	3.17827	AAGUGCU	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr2_-_144096253_144096308	3.13477	AAGUGCU	AK007676|Snx5|69178|sorting nexin 5	AK029463|Snx5|69178|sorting nexin 5	NM_024225|Snx5|69178|sorting nexin 5
mm9_v1_chr2_-_104656852_104656885	3.09708	AAGUGCU	NM_001123327|Qser1|99003|glutamine and serine rich 1
mm9_v1_chrX_-_159326220_159326424	3.08594	AAGUGCU	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr9_-_62994774_62994817	3.04366	AAGUGCU	BC138063|Skor1|207667|SKI family transcriptional corepressor 1	AK049035|Skor1|207667|SKI family transcriptional corepressor 1	NM_172446|Skor1|207667|SKI family transcriptional corepressor 1	AK134840|Skor1|207667|SKI family transcriptional corepressor 1	AB185113|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163755|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163757|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr15_+_41662472_41662583	3.03033	AAGUGCU	NM_001130164|Oxr1|170719|oxidation resistance 1	AK014186|3110047M12Rik|73184|RIKEN cDNA 3110047M12 gene
mm9_v1_chr19_+_3767420_3767525	3.02755	AAGUGCU	AK083227|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167884|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167885|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167886|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167887|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167888|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167889|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_144871|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK087267|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm9_v1_chr2_+_118727248_118727453	3.02569	AAGUGCU	NM_001045523|Bahd1|228536|bromo adjacent homology domain containing 1	AK152597|Bahd1|228536|bromo adjacent homology domain containing 1
mm9_v1_chr7_+_104728398_104728430	3.01022	AAGUGCU	AK134242|Rsf1|233532|remodeling and spacing factor 1	NM_001081267|Rsf1|233532|remodeling and spacing factor 1	AK138087|Rsf1|233532|remodeling and spacing factor 1	AK146675|Rsf1|233532|remodeling and spacing factor 1	BC085127|Rsf1|233532|remodeling and spacing factor 1	AK146154|Rsf1|233532|remodeling and spacing factor 1	AK032853|Rsf1|233532|remodeling and spacing factor 1
mm9_v1_chr2_-_166888514_166888514	2.99265	AAGUGCU	AK147564|Znfx1|98999|zinc finger, NFX1-type containing 1	AK147652|Znfx1|98999|zinc finger, NFX1-type containing 1	NM_001033196|Znfx1|98999|zinc finger, NFX1-type containing 1
mm9_v1_chr2_+_4480799_4480871	2.99057	AAGUGCU	AK077327|Frmd4a|209630|FERM domain containing 4A	NM_001177844|Frmd4a|209630|FERM domain containing 4A	AK148414|Frmd4a|209630|FERM domain containing 4A	AK029073|Frmd4a|209630|FERM domain containing 4A	AK171532|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr11_-_51813857_51813993	2.98633	AAGUGCU	AK010432|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK161008|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	X96859|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	U57690|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK011363|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	BC132075|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	BC132077|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK152316|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK152645|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK153174|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK169229|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	AK147785|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)	NM_009458|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
mm9_v1_chr5_+_28643698_28643741	2.98205	AAGUGCU	NM_028234|Rbm33|381626|RNA binding motif protein 33	AK014289|Rbm33|381626|RNA binding motif protein 33
mm9_v1_chr11_-_70832737_70832807	2.95686	AAGUGCU	AF208064|Derl2|116891|Der1-like domain family, member 2	AK083632|Derl2|116891|Der1-like domain family, member 2	BC005682|Derl2|116891|Der1-like domain family, member 2	AK083725|Derl2|116891|Der1-like domain family, member 2	AK048627|Derl2|116891|Der1-like domain family, member 2	AK077659|Derl2|116891|Der1-like domain family, member 2	AK082564|Derl2|116891|Der1-like domain family, member 2	NM_033562|Derl2|116891|Der1-like domain family, member 2	AK090105|Derl2|116891|Der1-like domain family, member 2
mm9_v1_chr8_+_108583449_108583790	2.93446	AAGUGCU	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr12_-_80397239_80397289	2.92869	AAGUGCU	AK220333|Zfyve26|211978|zinc finger, FYVE domain containing 26	BC141359|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK132344|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK041668|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK135518|Zfyve26|211978|zinc finger, FYVE domain containing 26	NM_001008550|Zfyve26|211978|zinc finger, FYVE domain containing 26
mm9_v1_chr5_-_9161670_9161791	2.9243	AAGUGCU	AK046201|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK078015|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC060109|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK029147|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK031887|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC045141|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC010272|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	U70017|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK040107|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK145803|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK033208|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK039563|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK030508|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK160595|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	NM_001110327|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	NM_011806|Dmtf1|23857|cyclin D binding myb-like transcription factor 1
mm9_v1_chrX_+_50265390_50265552	2.91212	AAGUGCU	AK157045|Phf6|70998|PHD finger protein 6	AK012211|Phf6|70998|PHD finger protein 6	AK077803|Phf6|70998|PHD finger protein 6	AK163345|Phf6|70998|PHD finger protein 6	BC043127|Phf6|70998|PHD finger protein 6	NM_027642|Phf6|70998|PHD finger protein 6	AK141804|Phf6|70998|PHD finger protein 6	BC055330|Phf6|70998|PHD finger protein 6	AK122560|Phf6|70998|PHD finger protein 6	AK028498|Phf6|70998|PHD finger protein 6	AK038320|Phf6|70998|PHD finger protein 6	BC057374|Phf6|70998|PHD finger protein 6	AK192342|Phf6|70998|PHD finger protein 6	AK213676|Phf6|70998|PHD finger protein 6
mm9_v1_chr13_-_64254466_64254592	2.88907	AAGUGCU	BC119531|Zfp367|238673|zinc finger protein 367	BC119532|Zfp367|238673|zinc finger protein 367	AK033288|Zfp367|238673|zinc finger protein 367	NM_175494|Zfp367|238673|zinc finger protein 367	AK041331|Zfp367|238673|zinc finger protein 367	AK041361|Zfp367|238673|zinc finger protein 367	AK077686|Zfp367|238673|zinc finger protein 367
mm9_v1_chr14_+_37868015_37868020	2.8511	AAGUGCU	AK044631|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	NM_146245|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	BC032270|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
mm9_v1_chrX_+_90531783_90531984	2.84801	AAGUGCU	AB006103|Arx|11878|aristaless related homeobox	BC052033|Arx|11878|aristaless related homeobox	NM_007492|Arx|11878|aristaless related homeobox
mm9_v1_chr5_-_96590773_96590783	2.84562	AAGUGCU	AK030112|Cnot6l|231464|CCR4-NOT transcription complex, subunit 6-like	NM_178854|Cnot6l|231464|CCR4-NOT transcription complex, subunit 6-like
mm9_v1_chr19_+_40969176_40969231	2.82198	AAGUGCU	AK087532|E130314M14Rik|449522|RIKEN cDNA E130314M14 gene	AK041506|Zfp518a|72672|zinc finger protein 518A	NM_028319|Zfp518a|72672|zinc finger protein 518A
mm9_v1_chr16_-_4559511_4559853	2.78052	AAGUGCU	AK053091|Tcfap4|83383|transcription factor AP4	BC054777|Tcfap4|83383|transcription factor AP4	BC047270|Tcfap4|83383|transcription factor AP4	AF161262|Tcfap4|83383|transcription factor AP4	NM_031182|Tcfap4|83383|transcription factor AP4	AK166424|Tcfap4|83383|transcription factor AP4
mm9_v1_chr7_-_30290470_30290595	2.76172	AAGUGCU	AK171182|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3	AK154121|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3	NM_001081028|Sipa1l3|74206|signal-induced proliferation-associated 1 like 3
mm9_v1_chr6_-_113991945_113992108	2.71899	AAGUGCU	AK147240|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	DQ406821|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK147369|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK147501|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_009723|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr2_-_136213509_136213702	2.71239	AAGUGCU	AK163530|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK032593|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK079080|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK013814|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	BC099417|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK077967|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	NM_172858|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7
mm9_v1_chr9_+_121669121_121669172	2.6878	AAGUGCU	NM_001166644|Zfp651|270210|zinc finger protein 651
mm9_v1_chr2_+_4322020_4322021	2.68177	AAGUGCU	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr12_+_4082573_4082658	2.63633	AAGUGCU	NM_153082|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC051140|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	AK049300|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC042643|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr17_+_78599556_78599594	2.63354	AAGUGCU	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr2_-_157030236_157030281	2.62638	AAGUGCU	BC060124|Rbl1|19650|retinoblastoma-like 1 (p107)	U33320|Rbl1|19650|retinoblastoma-like 1 (p107)	AK156055|Rbl1|19650|retinoblastoma-like 1 (p107)	U27177|Rbl1|19650|retinoblastoma-like 1 (p107)	U27178|Rbl1|19650|retinoblastoma-like 1 (p107)	AK033402|Rbl1|19650|retinoblastoma-like 1 (p107)	AK147064|Rbl1|19650|retinoblastoma-like 1 (p107)	NM_001139516|Rbl1|19650|retinoblastoma-like 1 (p107)	NM_011249|Rbl1|19650|retinoblastoma-like 1 (p107)
mm9_v1_chr13_-_9764376_9764487	2.61657	AAGUGCU	BC022945|Zmynd11|66505|zinc finger, MYND domain containing 11	AK077732|Zmynd11|66505|zinc finger, MYND domain containing 11	NM_144516|Zmynd11|66505|zinc finger, MYND domain containing 11
mm9_v1_chr16_-_92826307_92826318	2.58988	AAGUGCU	AK165307|Runx1|12394|runt related transcription factor 1	AK145098|Runx1|12394|runt related transcription factor 1	NM_001111021|Runx1|12394|runt related transcription factor 1	NM_001111022|Runx1|12394|runt related transcription factor 1	AK040240|Runx1|12394|runt related transcription factor 1
mm9_v1_chr2_+_4073908_4073934	2.5892	AAGUGCU	NM_172475|Frmd4a|209630|FERM domain containing 4A	AK034706|Frmd4a|209630|FERM domain containing 4A	BC058672|Frmd4a|209630|FERM domain containing 4A	AK163887|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr2_+_49921978_49921983	2.58745	AAGUGCU	NM_177139|Lypd6|320343|LY6/PLAUR domain containing 6	AK053620|Lypd6|320343|LY6/PLAUR domain containing 6
mm9_v1_chr11_+_98657082_98657130	2.58531	AAGUGCU	BC058629|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	NM_028722|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	BC043039|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	AK053719|Msl1|74026|male-specific lethal 1 homolog (Drosophila)	BC055715|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chrX_+_165474542_165474656	2.56799	AAGUGCU	AK047827|Arhgap6|11856|Rho GTPase activating protein 6	NM_178754|Arhgap6|11856|Rho GTPase activating protein 6	AK077996|Arhgap6|11856|Rho GTPase activating protein 6	AK048507|Arhgap6|11856|Rho GTPase activating protein 6	AK048162|Arhgap6|11856|Rho GTPase activating protein 6	AK170575|Arhgap6|11856|Rho GTPase activating protein 6	AK079651|Arhgap6|11856|Rho GTPase activating protein 6	AK171337|Arhgap6|11856|Rho GTPase activating protein 6
mm9_v1_chr15_-_103170514_103170552	2.55686	AAGUGCU	AF118566|Zfp385a|29813|zinc finger protein 385A	NM_013866|Zfp385a|29813|zinc finger protein 385A	AK137748|Zfp385a|29813|zinc finger protein 385A
mm9_v1_chr13_-_117814322_117814345	2.55343	AAGUGCU	NM_001081009|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK155693|Parp8|52552|poly (ADP-ribose) polymerase family, member 8
mm9_v1_chr4_-_44180323_44180519	2.55079	AAGUGCU	BC062976|Rnf38|73469|ring finger protein 38	BC060730|Rnf38|73469|ring finger protein 38	NM_175201|Rnf38|73469|ring finger protein 38	AK006888|Rnf38|73469|ring finger protein 38
mm9_v1_chr5_-_37380147_37380223	2.52473	AAGUGCU	AJ011971|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AF084482|Wfs1|22393|Wolfram syndrome 1 homolog (human)	BC046988|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AK144561|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AK170180|Wfs1|22393|Wolfram syndrome 1 homolog (human)	AK145023|Wfs1|22393|Wolfram syndrome 1 homolog (human)	NM_011716|Wfs1|22393|Wolfram syndrome 1 homolog (human)
mm9_v1_chr16_-_98144201_98144247	2.49054	AAGUGCU	AK077731|C2cd2|207781|C2 calcium-dependent domain containing 2	BC043688|C2cd2|207781|C2 calcium-dependent domain containing 2	AK017896|C2cd2|207781|C2 calcium-dependent domain containing 2	AK143875|C2cd2|207781|C2 calcium-dependent domain containing 2	AK220454|C2cd2|207781|C2 calcium-dependent domain containing 2	AK086520|C2cd2|207781|C2 calcium-dependent domain containing 2	NM_174847|C2cd2|207781|C2 calcium-dependent domain containing 2
mm9_v1_chr9_-_62996767_62996767	2.48489	AAGUGCU	AK029916|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163758|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr6_-_116143380_116143517	2.48233	AAGUGCU	AK173022|Tmcc1|330401|transmembrane and coiled coil domains 1	NM_177412|Tmcc1|330401|transmembrane and coiled coil domains 1
mm9_v1_chr6_+_114593104_114593174	2.46489	AAGUGCU	AK007484|Atg7|74244|autophagy-related 7 (yeast)	NM_028835|Atg7|74244|autophagy-related 7 (yeast)	AK166023|Atg7|74244|autophagy-related 7 (yeast)	AK170769|Atg7|74244|autophagy-related 7 (yeast)	AK146992|Atg7|74244|autophagy-related 7 (yeast)	AK161133|Atg7|74244|autophagy-related 7 (yeast)	AK165653|Atg7|74244|autophagy-related 7 (yeast)	AK166074|Atg7|74244|autophagy-related 7 (yeast)	AK171968|Atg7|74244|autophagy-related 7 (yeast)	AK172272|Atg7|74244|autophagy-related 7 (yeast)	BC058597|Atg7|74244|autophagy-related 7 (yeast)
mm9_v1_chr12_-_73337707_73337756	2.4424	AAGUGCU	AK002997|Rtn1|104001|reticulon 1	NM_001007596|Rtn1|104001|reticulon 1
mm9_v1_chr5_-_144493077_144493148	2.43218	AAGUGCU	NM_029749|Usp42|76800|ubiquitin specific peptidase 42
mm9_v1_chr4_+_59818521_59818521	2.43045	AAGUGCU	AK147437|Snx30|209131|sorting nexin family member 30	NM_172468|Snx30|209131|sorting nexin family member 30
mm9_v1_chr12_+_54349663_54349663	2.38876	AAGUGCU	AF173871|Npas3|27386|neuronal PAS domain protein 3	BC120885|Npas3|27386|neuronal PAS domain protein 3	BC148199|Npas3|27386|neuronal PAS domain protein 3	NM_013780|Npas3|27386|neuronal PAS domain protein 3
mm9_v1_chr6_+_53989925_53989975	2.38788	AAGUGCU	AK030336|Chn2|69993|chimerin (chimaerin) 2	NM_001163640|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr13_+_14156038_14156092	2.33511	AAGUGCU	AK136105|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK041414|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_194262|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_198122|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK161669|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK031062|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)
mm9_v1_chr15_+_80629020_80629144	2.32839	AAGUGCU	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr9_-_119488133_119488133	2.31014	AAGUGCU	AK147254|Scn5a|20271|sodium channel, voltage-gated, type V, alpha	AK147517|Scn5a|20271|sodium channel, voltage-gated, type V, alpha	NM_021544|Scn5a|20271|sodium channel, voltage-gated, type V, alpha
mm9_v1_chr10_-_114238419_114238425	2.30199	AAGUGCU	BC032288|Trhde|237553|TRH-degrading enzyme	AK085724|Trhde|237553|TRH-degrading enzyme	NM_146241|Trhde|237553|TRH-degrading enzyme
mm9_v1_chr2_-_6805937_6806041	2.28615	AAGUGCU	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr10_+_13686174_13686209	2.26814	AAGUGCU	AK147244|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147348|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147655|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	NM_010437|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr2_-_35960774_35960927	2.22491	AAGUGCU	AK090339|Lhx6|16874|LIM homeobox protein 6	AJ000337|Lhx6|16874|LIM homeobox protein 6	AK140987|Lhx6|16874|LIM homeobox protein 6	NM_001083125|Lhx6|16874|LIM homeobox protein 6	NM_008500|Lhx6|16874|LIM homeobox protein 6
mm9_v1_chrX_-_45561726_45561881	2.21981	AAGUGCU	BC042618|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK035745|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK079248|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032252|Zdhhc9|208884|zinc finger, DHHC domain containing 9	AK032233|Zdhhc9|208884|zinc finger, DHHC domain containing 9	NM_172465|Zdhhc9|208884|zinc finger, DHHC domain containing 9
mm9_v1_chr7_+_129210684_129210770	2.1582	AAGUGCU	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr12_-_73509925_73510040	2.14353	AAGUGCU	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr11_+_87405628_87405720	2.12138	AAGUGCU	AF262986|Mtmr4|170749|myotubularin related protein 4	NM_133215|Mtmr4|170749|myotubularin related protein 4	BC058091|Mtmr4|170749|myotubularin related protein 4	BC058364|Mtmr4|170749|myotubularin related protein 4
mm9_v1_chr11_-_65083442_65083498	2.1129	AAGUGCU	AF384055|Myocd|214384|myocardin	AY303755|Myocd|214384|myocardin	NM_145136|Myocd|214384|myocardin	NM_146386|Myocd|214384|myocardin	AK142216|Myocd|214384|myocardin
mm9_v1_chr6_+_38501333_38501546	2.10763	AAGUGCU	AK046307|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK044839|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170848|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170849|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_138680|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK155264|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056383|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056354|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056970|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK166155|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK147889|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AF318301|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK038543|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK048581|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK053863|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK134191|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr3_+_114783882_114783882	2.10404	AAGUGCU	AF442824|Olfm3|229759|olfactomedin 3	NM_153157|Olfm3|229759|olfactomedin 3
mm9_v1_chr16_-_89818596_89818596	2.09517	AAGUGCU	AK136856|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145887|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr5_-_8997126_8997149	2.06671	AAGUGCU	BC006593|Crot|74114|carnitine O-octanoyltransferase	AK004567|Crot|74114|carnitine O-octanoyltransferase	NM_023733|Crot|74114|carnitine O-octanoyltransferase
mm9_v1_chr13_+_12658130_12658343	2.06655	AAGUGCU	AK160664|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC058721|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	NM_026184|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AK004981|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AK041951|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC111900|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC112426|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC145888|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC145890|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AF489856|Ero1lb|67475|ERO1-like beta (S. cerevisiae)
mm9_v1_chr11_+_77499638_77499656	2.06498	AAGUGCU	AK030113|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK160601|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	NM_001024205|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK170764|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK122494|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr2_-_156832762_156832889	2.06314	AAGUGCU	AK145373|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK017813|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC046807|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC025079|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK006246|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK017740|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	NM_025853|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK139887|Dsn1|66934|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr17_+_53723450_53723450	2.03823	AAGUGCU	AK030070|Kat2b|18519|K(lysine) acetyltransferase 2B	NM_001190846|Kat2b|18519|K(lysine) acetyltransferase 2B
mm9_v1_chr4_+_11083585_11083598	2.01974	AAGUGCU	AJ131776|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AY034611|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AY034612|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	NM_021897|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AK054214|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AK142321|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1
mm9_v1_chr6_+_140572056_140572226	2.00368	AAGUGCU	NM_001005605|Aebp2|11569|AE binding protein 2
mm9_v1_chr8_-_70498472_70498472	1.99929	AAGUGCU	AB220685|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_177698|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr17_+_53706283_53706299	1.98096	AAGUGCU	AK156290|Kat2b|18519|K(lysine) acetyltransferase 2B	NM_020005|Kat2b|18519|K(lysine) acetyltransferase 2B
mm9_v1_chr3_+_90058166_90058262	1.97305	AAGUGCU	NM_028881|Crtc2|74343|CREB regulated transcription coactivator 2	BC032183|Crtc2|74343|CREB regulated transcription coactivator 2	AK169944|Crtc2|74343|CREB regulated transcription coactivator 2	BC033300|Crtc2|74343|CREB regulated transcription coactivator 2	BC023831|Crtc2|74343|CREB regulated transcription coactivator 2	AK156192|Crtc2|74343|CREB regulated transcription coactivator 2	AK079382|Crtc2|74343|CREB regulated transcription coactivator 2	AK172084|Crtc2|74343|CREB regulated transcription coactivator 2	BC023091|Crtc2|74343|CREB regulated transcription coactivator 2
mm9_v1_chr5_-_46247789_46247790	1.96457	AAGUGCU	AB076078|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK042567|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_172153|Lcorl|209707|ligand dependent nuclear receptor corepressor-like
mm9_v1_chr8_+_47825098_47825208	1.95252	AAGUGCU	NM_008391|Irf2|16363|interferon regulatory factor 2	AK087926|Irf2|16363|interferon regulatory factor 2	AK155025|Irf2|16363|interferon regulatory factor 2	BC110666|Irf2|16363|interferon regulatory factor 2	BC006577|Irf2|16363|interferon regulatory factor 2	AK036652|Irf2|16363|interferon regulatory factor 2	J03168|Irf2|16363|interferon regulatory factor 2
mm9_v1_chr10_+_80599005_80599015	1.95216	AAGUGCU	BC024815|Zbtb7a|16969|zinc finger and BTB domain containing 7a	NM_010731|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr19_-_34821529_34821600	1.93927	AAGUGCU	AK028284|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	AK029076|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	NM_172838|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm9_v1_chr12_+_30213224_30213265	1.91672	AAGUGCU	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr8_-_92872139_92872206	1.9106	AAGUGCU	AK082602|Tox3|244579|TOX high mobility group box family member 3	NM_172913|Tox3|244579|TOX high mobility group box family member 3
mm9_v1_chr1_-_163806710_163806814	1.90414	AAGUGCU	BC138379|AI848100|226551|expressed sequence AI848100	AK171856|AI848100|226551|expressed sequence AI848100	NM_172645|AI848100|226551|expressed sequence AI848100
mm9_v1_chr8_-_36558514_36558598	1.89061	AAGUGCU	AK165026|Eri1|67276|exoribonuclease 1	BC046412|Eri1|67276|exoribonuclease 1	AK172005|Eri1|67276|exoribonuclease 1	AK144223|Eri1|67276|exoribonuclease 1	AK014041|Eri1|67276|exoribonuclease 1	AK014410|Eri1|67276|exoribonuclease 1	NM_026067|Eri1|67276|exoribonuclease 1
mm9_v1_chr5_+_8422837_8422987	1.85612	AAGUGCU	AK044260|Slc25a40|319653|solute carrier family 25, member 40	AK045863|Slc25a40|319653|solute carrier family 25, member 40	NM_178766|Slc25a40|319653|solute carrier family 25, member 40	AK044862|Slc25a40|319653|solute carrier family 25, member 40	AK136770|Slc25a40|319653|solute carrier family 25, member 40	AK163037|Slc25a40|319653|solute carrier family 25, member 40	AK088444|Slc25a40|319653|solute carrier family 25, member 40	AK079538|Slc25a40|319653|solute carrier family 25, member 40	AK084797|Slc25a40|319653|solute carrier family 25, member 40	BC083103|Slc25a40|319653|solute carrier family 25, member 40
mm9_v1_chr16_+_57549340_57549381	1.84119	AAGUGCU	AK019472|Filip1l|78749|filamin A interacting protein 1-like	NM_001177871|Filip1l|78749|filamin A interacting protein 1-like	AK132319|Filip1l|78749|filamin A interacting protein 1-like	BC024523|Filip1l|78749|filamin A interacting protein 1-like	BC062166|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chrX_+_157205944_157206093	1.82699	AAGUGCU	BC046422|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	NM_011302|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF084561|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF073780|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AJ011381|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)
mm9_v1_chr8_-_116372637_116372742	1.81105	AAGUGCU	AK035797|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK081122|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	NM_172466|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK053851|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm9_v1_chr9_-_62384846_62384857	1.80031	AAGUGCU	AK087414|Coro2b|235431|coronin, actin binding protein, 2B	NM_175484|Coro2b|235431|coronin, actin binding protein, 2B
mm9_v1_chr11_-_82704059_82704118	1.78448	AAGUGCU	AK036272|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB007040|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052828|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052829|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052830|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052831|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052832|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052833|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052834|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	BC049136|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AK147759|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AF034955|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	EU627687|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	EU627688|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	Y15570|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AK017835|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AK138553|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	NM_011235|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)
mm9_v1_chr5_+_98609872_98610052	1.77139	AAGUGCU	AK050852|Prdm8|77630|PR domain containing 8	NM_029947|Prdm8|77630|PR domain containing 8	AK036202|Prdm8|77630|PR domain containing 8	AK044713|Prdm8|77630|PR domain containing 8	BC141020|Prdm8|77630|PR domain containing 8
mm9_v1_chr6_-_113841356_113841375	1.7625	AAGUGCU	DQ406822|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK051287|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	BC075643|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_001036684|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr12_+_53800369_53800393	1.76196	AAGUGCU	AK147248|Akap6|238161|A kinase (PRKA) anchor protein 6	AK147371|Akap6|238161|A kinase (PRKA) anchor protein 6	NM_198111|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr5_-_46248719_46248778	1.74936	AAGUGCU	BC066151|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK041987|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK043498|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK154398|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK155421|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK083689|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK043845|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	BC138563|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_001163073|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_178142|Lcorl|209707|ligand dependent nuclear receptor corepressor-like
mm9_v1_chr5_-_21207158_21207169	1.72601	AAGUGCU	AK041194|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	AK080888|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D	NM_178728|Napepld|242864|N-acyl phosphatidylethanolamine phospholipase D
mm9_v1_chr5_+_31014229_31014273	1.72206	AAGUGCU	AK044866|Dpysl5|65254|dihydropyrimidinase-like 5	BC065054|Dpysl5|65254|dihydropyrimidinase-like 5	NM_023047|Dpysl5|65254|dihydropyrimidinase-like 5	BC103789|Dpysl5|65254|dihydropyrimidinase-like 5
mm9_v1_chr9_-_99469275_99469317	1.70203	AAGUGCU	BC038866|Armc8|74125|armadillo repeat containing 8	AK004793|Armc8|74125|armadillo repeat containing 8	NM_001166138|Armc8|74125|armadillo repeat containing 8	NM_028768|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr18_+_60685866_60685974	1.62405	AAGUGCU	AK162552|Dctn4|67665|dynactin 4	AK168484|Dctn4|67665|dynactin 4	AK160813|Dctn4|67665|dynactin 4	AK050896|Dctn4|67665|dynactin 4	AK019382|Dctn4|67665|dynactin 4	BC034725|Dctn4|67665|dynactin 4	NM_026302|Dctn4|67665|dynactin 4	AK141855|Dctn4|67665|dynactin 4	AK003238|Dctn4|67665|dynactin 4	AK089264|Dctn4|67665|dynactin 4	BC006677|Dctn4|67665|dynactin 4	AK177969|Dctn4|67665|dynactin 4	AK197489|Dctn4|67665|dynactin 4
mm9_v1_chr3_+_114606995_114607339	1.62088	AAGUGCU	AK049612|Olfm3|229759|olfactomedin 3	AK044605|Olfm3|229759|olfactomedin 3	AK045482|Olfm3|229759|olfactomedin 3	AK038569|Olfm3|229759|olfactomedin 3	AK079315|Olfm3|229759|olfactomedin 3	AK044325|Olfm3|229759|olfactomedin 3	AK137414|Olfm3|229759|olfactomedin 3	AF442825|Olfm3|229759|olfactomedin 3	NM_153458|Olfm3|229759|olfactomedin 3	BC112422|Olfm3|229759|olfactomedin 3	BC113129|Olfm3|229759|olfactomedin 3
mm9_v1_chr13_-_55431027_55431105	1.6174	AAGUGCU	U32394|Mxd3|17121|Max dimerization protein 3	AK138742|Mxd3|17121|Max dimerization protein 3	NM_016662|Mxd3|17121|Max dimerization protein 3	AK086190|Mxd3|17121|Max dimerization protein 3	BC051970|Mxd3|17121|Max dimerization protein 3	AK014516|Mxd3|17121|Max dimerization protein 3
mm9_v1_chr11_+_29273673_29273774	1.61107	AAGUGCU	AK051140|Ccdc88a|108686|coiled coil domain containing 88A	NM_176841|Ccdc88a|108686|coiled coil domain containing 88A
mm9_v1_chr4_-_151235861_151235879	1.60186	AAGUGCU	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr6_+_54222814_54222856	1.58808	AAGUGCU	BC051139|Chn2|69993|chimerin (chimaerin) 2	NM_023543|Chn2|69993|chimerin (chimaerin) 2	BC141060|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr4_+_6118247_6118251	1.55419	AAGUGCU	AK028268|Ubxn2b|68053|UBX domain protein 2B	AK018273|Ubxn2b|68053|UBX domain protein 2B	AK032332|Ubxn2b|68053|UBX domain protein 2B	BC076632|Ubxn2b|68053|UBX domain protein 2B	NM_026534|Ubxn2b|68053|UBX domain protein 2B
mm9_v1_chr2_+_164658367_164658483	1.55009	AAGUGCU	NM_001038492|Ctsa|19025|cathepsin A	NM_008906|Ctsa|19025|cathepsin A	AK019861|Ctsa|19025|cathepsin A	J05261|Ctsa|19025|cathepsin A
mm9_v1_chr3_+_116297899_116297929	1.54592	AAGUGCU	AK013338|Sass6|72776|spindle assembly 6 homolog (C. elegans)	BC050110|Sass6|72776|spindle assembly 6 homolog (C. elegans)	NM_028349|Sass6|72776|spindle assembly 6 homolog (C. elegans)	AK145076|Sass6|72776|spindle assembly 6 homolog (C. elegans)	AK165224|Sass6|72776|spindle assembly 6 homolog (C. elegans)
mm9_v1_chr6_+_120616386_120616438	1.54447	AAGUGCU	AK137536|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)	NM_001128151|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)
mm9_v1_chr10_+_127814144_127814228	1.52971	AAGUGCU	AK144017|Ankrd52|237615|ankyrin repeat domain 52	AK032429|Ankrd52|237615|ankyrin repeat domain 52	NM_172790|Ankrd52|237615|ankyrin repeat domain 52	AK090124|Ankrd52|237615|ankyrin repeat domain 52	AK035533|Ankrd52|237615|ankyrin repeat domain 52	BC117907|Ankrd52|237615|ankyrin repeat domain 52	BC117908|Ankrd52|237615|ankyrin repeat domain 52
mm9_v1_chr15_-_82742536_82742563	1.5238	AAGUGCU	BC138038|Tcf20|21411|transcription factor 20	BC171946|Tcf20|21411|transcription factor 20	AY007594|Tcf20|21411|transcription factor 20	NM_001114140|Tcf20|21411|transcription factor 20	NM_013836|Tcf20|21411|transcription factor 20
mm9_v1_chr4_-_53172748_53172872	1.52126	AAGUGCU	AK051920|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1	NM_013454|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr18_+_44540137_44540241	1.51683	AAGUGCU	AK153105|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_027490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK008609|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK017809|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK166560|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK010490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK152160|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153264|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153310|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)
mm9_v1_chr11_-_101087738_101087767	1.49983	AAGUGCU	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr2_-_150514717_150514872	1.48433	AAGUGCU	AF391758|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AY056825|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044393|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044687|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138456|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138460|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AF395732|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC057647|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	NM_054068|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)
mm9_v1_chr16_-_67621054_67621188	1.4646	AAGUGCU	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr6_-_85452851_85452987	1.42448	AAGUGCU	AK147681|Fbxo41|330369|F-box protein 41	AK147230|Fbxo41|330369|F-box protein 41	NM_001001160|Fbxo41|330369|F-box protein 41	BC070445|Fbxo41|330369|F-box protein 41
mm9_v1_chr10_-_129717244_129717295	1.40949	AAGUGCU	BC042639|Neurod4|11923|neurogenic differentiation 4	AK012183|Neurod4|11923|neurogenic differentiation 4	BC054391|Neurod4|11923|neurogenic differentiation 4	NM_007501|Neurod4|11923|neurogenic differentiation 4
mm9_v1_chr3_-_108003697_108003757	1.40487	AAGUGCU	AK087683|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC060107|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC137590|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_001081320|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_028061|Cyb561d1|72023|cytochrome b-561 domain containing 1	AK164441|Cyb561d1|72023|cytochrome b-561 domain containing 1
mm9_v1_chr10_-_66559568_66559740	1.40329	AAGUGCU	AY562231|Reep3|28193|receptor accessory protein 3	AK154559|Reep3|28193|receptor accessory protein 3	AK047728|Reep3|28193|receptor accessory protein 3	AK079649|Reep3|28193|receptor accessory protein 3	NM_178606|Reep3|28193|receptor accessory protein 3	BC004607|Reep3|28193|receptor accessory protein 3	AK008058|Reep3|28193|receptor accessory protein 3	AK012403|Reep3|28193|receptor accessory protein 3	AK005026|Reep3|28193|receptor accessory protein 3	AK028868|Reep3|28193|receptor accessory protein 3
mm9_v1_chr12_-_103151331_103151476	1.39754	AAGUGCU	AK077954|Trip11|109181|thyroid hormone receptor interactor 11	AK081763|Trip11|109181|thyroid hormone receptor interactor 11	AK014103|Trip11|109181|thyroid hormone receptor interactor 11	AK148294|Trip11|109181|thyroid hormone receptor interactor 11	AK012112|Trip11|109181|thyroid hormone receptor interactor 11	NM_028446|Trip11|109181|thyroid hormone receptor interactor 11	BC158098|Trip11|109181|thyroid hormone receptor interactor 11
mm9_v1_chr4_+_116393559_116393581	1.39611	AAGUGCU	AK047755|Tesk2|230661|testis-specific kinase 2	NM_146151|Tesk2|230661|testis-specific kinase 2	AK031814|Tesk2|230661|testis-specific kinase 2	AK053368|Tesk2|230661|testis-specific kinase 2	BC029766|Tesk2|230661|testis-specific kinase 2
mm9_v1_chr7_+_130114059_130114440	1.39364	AAGUGCU	NM_011247|Rbbp6|19647|retinoblastoma binding protein 6	NM_175023|Rbbp6|19647|retinoblastoma binding protein 6	AK081261|Rbbp6|19647|retinoblastoma binding protein 6	AK045635|Rbbp6|19647|retinoblastoma binding protein 6	BC025874|Rbbp6|19647|retinoblastoma binding protein 6
mm9_v1_chr16_-_89960987_89961071	1.39135	AAGUGCU	AK017465|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_009384|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	U05245|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr9_+_30838224_30838249	1.35814	AAGUGCU	AK036895|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_001115130|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_172765|Zbtb44|235132|zinc finger and BTB domain containing 44
mm9_v1_chr11_+_104469313_104469402	1.34681	AAGUGCU	BC125518|Itgb3|16416|integrin beta 3	BC125520|Itgb3|16416|integrin beta 3	NM_016780|Itgb3|16416|integrin beta 3	AK157958|Itgb3|16416|integrin beta 3	AF026509|Itgb3|16416|integrin beta 3	AY541673|Itgb3|16416|integrin beta 3	U83167|Itgb3|16416|integrin beta 3
mm9_v1_chr19_+_44637331_44637363	1.33722	AAGUGCU	AK154774|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	BC130013|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	NM_176958|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK084960|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK043636|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor	AK141867|Hif1an|319594|hypoxia-inducible factor 1, alpha subunit inhibitor
mm9_v1_chr5_-_143579060_143579087	1.3213	AAGUGCU	BC049818|Tnrc18|231861|trinucleotide repeat containing 18	NM_001122730|Tnrc18|231861|trinucleotide repeat containing 18	NM_178242|Tnrc18|231861|trinucleotide repeat containing 18
mm9_v1_chr19_-_12870612_12870615	1.32084	AAGUGCU	NM_053009|Zfp91|109910|zinc finger protein 91	AK147560|Zfp91|109910|zinc finger protein 91
mm9_v1_chr2_+_129418930_129419057	1.27815	AAGUGCU	NM_001177647|Sirpa|19261|signal-regulatory protein alpha	NM_007547|Sirpa|19261|signal-regulatory protein alpha	D87967|Sirpa|19261|signal-regulatory protein alpha	D87968|Sirpa|19261|signal-regulatory protein alpha	D85785|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr2_-_35959513_35959579	1.26872	AAGUGCU	BC065077|Lhx6|16874|LIM homeobox protein 6	AB031039|Lhx6|16874|LIM homeobox protein 6	AB031040|Lhx6|16874|LIM homeobox protein 6	NM_001083126|Lhx6|16874|LIM homeobox protein 6	NM_001083127|Lhx6|16874|LIM homeobox protein 6
mm9_v1_chr2_+_129418533_129418826	1.25338	AAGUGCU	AK159617|Sirpa|19261|signal-regulatory protein alpha	NM_001177646|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr1_-_137815600_137815702	1.24364	AAGUGCU	NM_019645|Pkp1|18772|plakophilin 1	Y07941|Pkp1|18772|plakophilin 1	BC139041|Pkp1|18772|plakophilin 1	BC139042|Pkp1|18772|plakophilin 1
mm9_v1_chr12_-_86680251_86680341	1.22533	AAGUGCU	BC117972|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	BC117971|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AJ489828|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AK173323|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	NM_145138|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9
mm9_v1_chr16_-_3872273_3872373	1.21646	AAGUGCU	AK016727|Zfp597|71063|zinc finger protein 597	NM_001033159|Zfp597|71063|zinc finger protein 597
mm9_v1_chr1_+_6204729_6204756	1.21645	AAGUGCU	AB050017|Rb1cc1|12421|RB1-inducible coiled-coil 1	AB070619|Rb1cc1|12421|RB1-inducible coiled-coil 1	NM_009826|Rb1cc1|12421|RB1-inducible coiled-coil 1	AK020027|Rb1cc1|12421|RB1-inducible coiled-coil 1
mm9_v1_chr7_+_107855215_107855319	1.20909	AAGUGCU	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr11_+_70658261_70658270	1.20288	AAGUGCU	AK134587|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	NM_019400|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr10_-_62342761_62342761	1.20013	AAGUGCU	GU079948|Tet1|52463|tet oncogene 1	NM_027384|Tet1|52463|tet oncogene 1
mm9_v1_chr11_-_103611082_103611134	1.19746	AAGUGCU	AF469004|Wnt9b|22412|wingless-type MMTV integration site 9B	AB073819|Wnt9b|22412|wingless-type MMTV integration site 9B	BC110482|Wnt9b|22412|wingless-type MMTV integration site 9B	AK052708|Wnt9b|22412|wingless-type MMTV integration site 9B	NM_011719|Wnt9b|22412|wingless-type MMTV integration site 9B
mm9_v1_chr19_-_19185685_19185685	1.18968	AAGUGCU	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr18_+_76401531_76401583	1.18436	AAGUGCU	BC021342|Smad2|17126|MAD homolog 2 (Drosophila)	AK007817|Smad2|17126|MAD homolog 2 (Drosophila)	NM_010754|Smad2|17126|MAD homolog 2 (Drosophila)
mm9_v1_chr7_-_105457979_105458055	1.18361	AAGUGCU	AK150629|Acer3|66190|alkaline ceramidase 3	AK080977|Acer3|66190|alkaline ceramidase 3	AK011668|Acer3|66190|alkaline ceramidase 3	NM_025408|Acer3|66190|alkaline ceramidase 3	AK004287|Acer3|66190|alkaline ceramidase 3	AK162403|Acer3|66190|alkaline ceramidase 3
mm9_v1_chr1_+_169619688_169619905	1.18359	AAGUGCU	AK044944|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	NM_033652|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	BC109167|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	BC109168|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	AF226662|Lmx1a|110648|LIM homeobox transcription factor 1 alpha
mm9_v1_chr8_-_82581887_82581932	1.17964	AAGUGCU	AF116865|Hhip|15245|Hedgehog-interacting protein	BC053012|Hhip|15245|Hedgehog-interacting protein	AK031539|Hhip|15245|Hedgehog-interacting protein	NM_020259|Hhip|15245|Hedgehog-interacting protein
mm9_v1_chr16_-_16560240_16560303	1.16916	AAGUGCU	BC145523|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AF402611|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	NM_139232|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AF402613|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	NM_139234|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AK034504|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4	AK134961|Fgd4|224014|FYVE, RhoGEF and PH domain containing 4
mm9_v1_chr7_+_114514258_114514338	1.16887	AAGUGCU	AK089115|Syt9|60510|synaptotagmin IX	NM_021889|Syt9|60510|synaptotagmin IX	AK156631|Syt9|60510|synaptotagmin IX	BC132495|Syt9|60510|synaptotagmin IX	BC137904|Syt9|60510|synaptotagmin IX	BC145024|Syt9|60510|synaptotagmin IX
mm9_v1_chr2_+_72314235_72314311	1.15241	AAGUGCU	AK028671|Cdca7|66953|cell division cycle associated 7	BC066169|Cdca7|66953|cell division cycle associated 7	AK011289|Cdca7|66953|cell division cycle associated 7	AK167734|Cdca7|66953|cell division cycle associated 7	NM_025866|Cdca7|66953|cell division cycle associated 7	AK153943|Cdca7|66953|cell division cycle associated 7	AK075882|Cdca7|66953|cell division cycle associated 7
mm9_v1_chr8_-_129117310_129117573	1.1249	AAGUGCU	NM_001164598|Irf2bp2|270110|interferon regulatory factor 2 binding protein 2
mm9_v1_chr6_+_86799460_86799754	1.12292	AAGUGCU	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr1_-_167390568_167390623	1.11233	AAGUGCU	NM_028759|Dcaf6|74106|DDB1 and CUL4 associated factor 6
mm9_v1_chr7_+_66484094_66484221	1.09672	AAGUGCU	AK029133|Ube3a|22215|ubiquitin protein ligase E3A	NM_173010|Ube3a|22215|ubiquitin protein ligase E3A	NM_001033962|Ube3a|22215|ubiquitin protein ligase E3A	NM_011668|Ube3a|22215|ubiquitin protein ligase E3A	BC131658|Ube3a|22215|ubiquitin protein ligase E3A	BC131659|Ube3a|22215|ubiquitin protein ligase E3A	AK083795|Ube3a|22215|ubiquitin protein ligase E3A	AK220549|Ube3a|22215|ubiquitin protein ligase E3A
mm9_v1_chr8_-_70342105_70342226	1.08986	AAGUGCU	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chrX_-_75829120_75829237	1.0794	AAGUGCU	BC032926|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_001164275|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK008151|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK083396|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK135895|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	AK161802|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1	NM_027322|Prrg1|546336|proline rich Gla (G-carboxyglutamic acid) 1
mm9_v1_chr15_+_6658368_6658402	1.07862	AAGUGCU	AK029196|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036149|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036492|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK082586|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK087858|Rictor|78757|RPTOR independent companion of MTOR, complex 2	NM_030168|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY540053|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120903|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120904|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK019537|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK054119|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY497009|Rictor|78757|RPTOR independent companion of MTOR, complex 2
mm9_v1_chr16_-_89974943_89974943	1.07809	AAGUGCU	AK147392|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145886|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr4_+_55362895_55362941	1.06871	AAGUGCU	NM_009011|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK084917|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK142280|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK150089|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK160880|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK163379|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK167582|Rad23b|19359|RAD23b homolog (S. cerevisiae)	BC027747|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK160890|Rad23b|19359|RAD23b homolog (S. cerevisiae)	AK160973|Rad23b|19359|RAD23b homolog (S. cerevisiae)
mm9_v1_chr4_+_135242371_135242456	1.06642	AAGUGCU	AK141338|Il28ra|242700|interleukin 28 receptor alpha	NM_174851|Il28ra|242700|interleukin 28 receptor alpha	BC057856|Il28ra|242700|interleukin 28 receptor alpha	AY184376|Il28ra|242700|interleukin 28 receptor alpha
mm9_v1_chrX_-_57657081_57657155	1.06361	AAGUGCU	AK143860|Atp11c|320940|ATPase, class VI, type 11C	BC106087|Atp11c|320940|ATPase, class VI, type 11C	AK079479|Atp11c|320940|ATPase, class VI, type 11C	AK043065|Atp11c|320940|ATPase, class VI, type 11C	AK039243|Atp11c|320940|ATPase, class VI, type 11C	NM_001001798|Atp11c|320940|ATPase, class VI, type 11C	NM_001037863|Atp11c|320940|ATPase, class VI, type 11C
mm9_v1_chr9_-_96789818_96789892	1.05884	AAGUGCU	AK164254|Acpl2|235534|acid phosphatase-like 2	AK083712|Acpl2|235534|acid phosphatase-like 2	BC023960|Acpl2|235534|acid phosphatase-like 2	BC036342|Acpl2|235534|acid phosphatase-like 2	NM_153420|Acpl2|235534|acid phosphatase-like 2	AK043758|Acpl2|235534|acid phosphatase-like 2	AK082059|Acpl2|235534|acid phosphatase-like 2	AK084605|Acpl2|235534|acid phosphatase-like 2	AK144699|Acpl2|235534|acid phosphatase-like 2	AK036973|Acpl2|235534|acid phosphatase-like 2
mm9_v1_chr2_+_151907264_151907264	1.04407	AAGUGCU	NM_001160410|Scrt2|545474|scratch homolog 2, zinc finger protein (Drosophila)
mm9_v1_chrX_-_45816308_45816348	1.03868	AAGUGCU	AK155709|Elf4|56501|E74-like factor 4 (ets domain transcription factor)	NM_019680|Elf4|56501|E74-like factor 4 (ets domain transcription factor)	AK084896|Elf4|56501|E74-like factor 4 (ets domain transcription factor)
mm9_v1_chr10_+_53316720_53316974	1.03598	AAGUGCU	AK010210|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	NM_025541|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK012376|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK031513|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK088618|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK007804|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC027628|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm9_v1_chr9_-_105397342_105397452	1.02509	AAGUGCU	AK032255|Atp2c1|235574|ATPase, Ca++-sequestering	AK028393|Atp2c1|235574|ATPase, Ca++-sequestering	BC043706|Atp2c1|235574|ATPase, Ca++-sequestering	AK159918|Atp2c1|235574|ATPase, Ca++-sequestering	AK163049|Atp2c1|235574|ATPase, Ca++-sequestering	BC043091|Atp2c1|235574|ATPase, Ca++-sequestering	AK052958|Atp2c1|235574|ATPase, Ca++-sequestering	NM_175025|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr11_+_59120429_59120467	1.0032	AAGUGCU	AK087490|Wnt9a|216795|wingless-type MMTV integration site 9A	NM_139298|Wnt9a|216795|wingless-type MMTV integration site 9A	BC066165|Wnt9a|216795|wingless-type MMTV integration site 9A	AB072311|Wnt9a|216795|wingless-type MMTV integration site 9A
mm9_v1_chr9_-_110379093_110379197	0.998779	AAGUGCU	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr10_+_69707965_69708068	0.993743	AAGUGCU	AK004684|Slc16a9|66859|solute carrier family 16 (monocarboxylic acid transporters), member 9	AK004556|Slc16a9|66859|solute carrier family 16 (monocarboxylic acid transporters), member 9	NM_025807|Slc16a9|66859|solute carrier family 16 (monocarboxylic acid transporters), member 9	BC055839|Slc16a9|66859|solute carrier family 16 (monocarboxylic acid transporters), member 9	BC034205|Slc16a9|66859|solute carrier family 16 (monocarboxylic acid transporters), member 9
mm9_v1_chr2_-_38920925_38921012	0.986949	AAGUGCU	BC043090|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	NM_029793|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK028516|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC024637|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	BC053068|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK002954|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK008972|Golga1|76899|golgi autoantigen, golgin subfamily a, 1	AK044987|Golga1|76899|golgi autoantigen, golgin subfamily a, 1
mm9_v1_chr9_+_107904919_107905018	0.974484	AAGUGCU	AK172921|Ip6k1|27399|inositol hexaphosphate kinase 1	AK037925|Ip6k1|27399|inositol hexaphosphate kinase 1	AK088872|Ip6k1|27399|inositol hexaphosphate kinase 1	BC053030|Ip6k1|27399|inositol hexaphosphate kinase 1	AK171310|Ip6k1|27399|inositol hexaphosphate kinase 1	AK166143|Ip6k1|27399|inositol hexaphosphate kinase 1	BC059006|Ip6k1|27399|inositol hexaphosphate kinase 1	NM_013785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chrX_+_136219520_136219539	0.97126	AAGUGCU	NM_001081499|Tbc1d8b|245638|TBC1 domain family, member 8B
mm9_v1_chr2_-_153355706_153355706	0.97042	AAGUGCU	AK147524|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001134300|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr6_+_38383918_38383949	0.956484	AAGUGCU	NM_177185|Ubn2|320538|ubinuclein 2	AK013733|Ubn2|320538|ubinuclein 2	BC051458|Ubn2|320538|ubinuclein 2
mm9_v1_chr14_-_65568677_65568719	0.954467	AAGUGCU	AK089782|Hmbox1|219150|homeobox containing 1	AK161592|Hmbox1|219150|homeobox containing 1	NM_177338|Hmbox1|219150|homeobox containing 1	BC051457|Hmbox1|219150|homeobox containing 1	AK052729|Hmbox1|219150|homeobox containing 1
mm9_v1_chr15_-_100416795_100416795	0.941026	AAGUGCU	BC059830|Pou6f1|19009|POU domain, class 6, transcription factor 1	NM_010127|Pou6f1|19009|POU domain, class 6, transcription factor 1
mm9_v1_chr2_-_119303348_119303443	0.938666	AAGUGCU	BC061495|Ino80|68142|INO80 homolog (S. cerevisiae)	AK040612|Ino80|68142|INO80 homolog (S. cerevisiae)	NM_026574|Ino80|68142|INO80 homolog (S. cerevisiae)
mm9_v1_chr14_-_67487226_67487503	0.925792	AAGUGCU	Y10339|Dpysl2|12934|dihydropyrimidinase-like 2	X87242|Dpysl2|12934|dihydropyrimidinase-like 2	BC062955|Dpysl2|12934|dihydropyrimidinase-like 2	NM_009955|Dpysl2|12934|dihydropyrimidinase-like 2
mm9_v1_chr2_+_119722957_119723040	0.921294	AAGUGCU	AK046252|Mga|29808|MAX gene associated	NM_001164274|Mga|29808|MAX gene associated	NM_013720|Mga|29808|MAX gene associated	AK162302|Mga|29808|MAX gene associated	AK032570|Mga|29808|MAX gene associated	AK012050|Mga|29808|MAX gene associated	AK139919|Mga|29808|MAX gene associated	AK172962|Mga|29808|MAX gene associated
mm9_v1_chr8_+_86479405_86479613	0.913193	AAGUGCU	AK134906|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK005646|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK077005|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	BC003428|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	NM_024184|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK077718|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK150818|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK151951|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK165322|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
mm9_v1_chr5_+_137960107_137960139	0.901866	AAGUGCU	AY176042|Gigyf1|57330|GRB10 interacting GYF protein 1	NM_031408|Gigyf1|57330|GRB10 interacting GYF protein 1	BC052875|Gigyf1|57330|GRB10 interacting GYF protein 1
mm9_v1_chr6_+_4853319_4853431	0.901	AAGUGCU	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr16_+_33380860_33381006	0.891084	AAGUGCU	NM_011749|Zfp148|22661|zinc finger protein 148	AF316548|Zfp148|22661|zinc finger protein 148	X98096|Zfp148|22661|zinc finger protein 148	BC026144|Zfp148|22661|zinc finger protein 148
mm9_v1_chr5_-_84846348_84846408	0.881171	AAGUGCU	BC057401|Epha5|13839|Eph receptor A5	AK133698|Epha5|13839|Eph receptor A5	AK034289|Epha5|13839|Eph receptor A5	AK049740|Epha5|13839|Eph receptor A5	NM_007937|Epha5|13839|Eph receptor A5
mm9_v1_chr13_-_77274698_77274775	0.858587	AAGUGCU	AK047775|Ankrd32|105377|ankyrin repeat domain 32	BC100362|Ankrd32|105377|ankyrin repeat domain 32	BC061188|Ankrd32|105377|ankyrin repeat domain 32	AK012253|Ankrd32|105377|ankyrin repeat domain 32	AK089501|Ankrd32|105377|ankyrin repeat domain 32	AK171473|Ankrd32|105377|ankyrin repeat domain 32	NM_134071|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr9_+_98856025_98856025	0.851191	AAGUGCU	BC137811|Foxl2|26927|forkhead box L2	BC137812|Foxl2|26927|forkhead box L2	NM_012020|Foxl2|26927|forkhead box L2
mm9_v1_chr10_+_93610663_93610767	0.84031	AAGUGCU	AK146891|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	NM_011629|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK053907|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC090662|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC094580|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK149374|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1
mm9_v1_chr2_-_44717141_44717141	0.839863	AAGUGCU	AK054272|Gtdc1|227835|glycosyltransferase-like domain containing 1	NM_172662|Gtdc1|227835|glycosyltransferase-like domain containing 1
mm9_v1_chr3_-_144233110_144233181	0.835532	AAGUGCU	AK165112|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	AK088698|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	NM_011828|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr4_-_3865501_3865606	0.831963	AAGUGCU	BC139283|Plag1|56711|pleiomorphic adenoma gene 1	BC139285|Plag1|56711|pleiomorphic adenoma gene 1	AY574219|Plag1|56711|pleiomorphic adenoma gene 1	AK044405|Plag1|56711|pleiomorphic adenoma gene 1	NM_019969|Plag1|56711|pleiomorphic adenoma gene 1
mm9_v1_chr4_+_107474842_107475017	0.822157	AAGUGCU	NM_001080926|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D85463|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC127061|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	AJ312058|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm9_v1_chr11_+_95275392_95275501	0.811441	AAGUGCU	NM_025287|Spop|20747|speckle-type POZ protein	AK168546|Spop|20747|speckle-type POZ protein	AK030746|Spop|20747|speckle-type POZ protein	AK132383|Spop|20747|speckle-type POZ protein	BC045205|Spop|20747|speckle-type POZ protein	AK004669|Spop|20747|speckle-type POZ protein	AK159482|Spop|20747|speckle-type POZ protein	AK028201|Spop|20747|speckle-type POZ protein	BC064809|Spop|20747|speckle-type POZ protein	AK168185|Spop|20747|speckle-type POZ protein	AK166581|Spop|20747|speckle-type POZ protein	AK160858|Spop|20747|speckle-type POZ protein
mm9_v1_chr15_-_12754300_12754424	0.802343	AAGUGCU	AK036721|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	BC119058|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	BC137759|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK144748|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK037867|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	BC028769|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	BC099607|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK081625|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK054133|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK171821|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK163412|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK035859|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK038561|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK078182|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK020074|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK152195|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	NM_001166360|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	NM_029998|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene	AK162187|6030458C11Rik|77877|RIKEN cDNA 6030458C11 gene
mm9_v1_chr2_-_127410404_127410441	0.787886	AAGUGCU	BC052876|Zfp661|72180|zinc finger protein 661	AK033122|Zfp661|72180|zinc finger protein 661	NM_001111029|Zfp661|72180|zinc finger protein 661	NM_028141|Zfp661|72180|zinc finger protein 661
mm9_v1_chr3_-_104667319_104667422	0.758911	AAGUGCU	AK161370|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1	NM_009797|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1
mm9_v1_chr5_-_124875921_124875965	0.744961	AAGUGCU	NM_001081203|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK077133|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK165852|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)
mm9_v1_chr18_-_68459958_68459986	0.734588	AAGUGCU	AK077093|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	NM_153794|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr1_-_43155380_43155481	0.733055	AAGUGCU	BC138866|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	BC138867|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	BC072608|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	NM_001013025|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1	AK051333|Tgfbrap1|73122|transforming growth factor, beta receptor associated protein 1
mm9_v1_chr8_+_63111621_63111675	0.732596	AAGUGCU	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr11_-_103273956_103274013	0.730119	AAGUGCU	BC053079|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	NM_183034|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK155357|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK157752|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr1_-_45982242_45982463	0.719411	AAGUGCU	AK008700|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF231120|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF215637|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF226613|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	BC003438|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK159855|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK144780|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK147137|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK159294|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK167608|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	NM_016917|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK033987|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1
mm9_v1_chr10_-_128142007_128142106	0.714914	AAGUGCU	AJ223732|Cdk2|12566|cyclin-dependent kinase 2	U63337|Cdk2|12566|cyclin-dependent kinase 2	AK148017|Cdk2|12566|cyclin-dependent kinase 2	AK042462|Cdk2|12566|cyclin-dependent kinase 2	AK151979|Cdk2|12566|cyclin-dependent kinase 2	AK153983|Cdk2|12566|cyclin-dependent kinase 2	AK154997|Cdk2|12566|cyclin-dependent kinase 2	AK036589|Cdk2|12566|cyclin-dependent kinase 2	AK152922|Cdk2|12566|cyclin-dependent kinase 2	BC005654|Cdk2|12566|cyclin-dependent kinase 2	BC026145|Cdk2|12566|cyclin-dependent kinase 2	AK146845|Cdk2|12566|cyclin-dependent kinase 2	NM_016756|Cdk2|12566|cyclin-dependent kinase 2	NM_183417|Cdk2|12566|cyclin-dependent kinase 2
mm9_v1_chr15_+_99803210_99803320	0.706491	AAGUGCU	NM_001024526|Larp4|207214|La ribonucleoprotein domain family, member 4	AK165392|Larp4|207214|La ribonucleoprotein domain family, member 4	AK172198|Larp4|207214|La ribonucleoprotein domain family, member 4	AK049756|Larp4|207214|La ribonucleoprotein domain family, member 4	BC075726|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr8_+_109394141_109394246	0.704102	AAGUGCU	NM_008217|Has3|15118|hyaluronan synthase 3	U86408|Has3|15118|hyaluronan synthase 3	BC138152|Has3|15118|hyaluronan synthase 3	BC138161|Has3|15118|hyaluronan synthase 3
mm9_v1_chr4_+_33118344_33118432	0.694937	AAGUGCU	AK160428|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	NM_019586|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1
mm9_v1_chr18_+_37170365_37170627	0.681139	AAGUGCU	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr2_-_153270059_153270214	0.661227	AAGUGCU	BC079552|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK157863|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK139459|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001001986|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr14_-_104242892_104242969	0.643997	AAGUGCU	U32329|Ednrb|13618|endothelin receptor type B	AK085165|Ednrb|13618|endothelin receptor type B	AK076426|Ednrb|13618|endothelin receptor type B	AK085532|Ednrb|13618|endothelin receptor type B	NM_007904|Ednrb|13618|endothelin receptor type B
mm9_v1_chr9_+_75161942_75162049	0.641868	AAGUGCU	AK169323|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK050564|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	AK148175|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	L34290|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5	NM_138719|Gnb5|14697|guanine nucleotide binding protein (G protein), beta 5
mm9_v1_chr1_+_106665395_106665416	0.635248	AAGUGCU	AK034475|Cdh20|23836|cadherin 20	NM_011800|Cdh20|23836|cadherin 20	BC119606|Cdh20|23836|cadherin 20	BC119607|Cdh20|23836|cadherin 20
mm9_v1_chr11_-_102758460_102758513	0.630654	AAGUGCU	BC139357|Gfap|14580|glial fibrillary acidic protein	BC139358|Gfap|14580|glial fibrillary acidic protein	NM_001131020|Gfap|14580|glial fibrillary acidic protein	NM_010277|Gfap|14580|glial fibrillary acidic protein
mm9_v1_chr8_-_70434808_70434844	0.629311	AAGUGCU	BC052365|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK161498|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_030263|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr16_-_18235102_18235235	0.61363	AAGUGCU	AY668947|Zdhhc8|27801|zinc finger, DHHC domain containing 8	AY894892|Zdhhc8|27801|zinc finger, DHHC domain containing 8	NM_172151|Zdhhc8|27801|zinc finger, DHHC domain containing 8
mm9_v1_chr1_-_63160764_63160840	0.61136	AAGUGCU	AK049468|Ino80d|227195|INO80 complex subunit D	NM_001081436|Ino80d|227195|INO80 complex subunit D	NM_001114609|Ino80d|227195|INO80 complex subunit D
mm9_v1_chr9_+_107242932_107243058	0.609326	AAGUGCU	AK043338|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	AK085251|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	AK032501|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	AK032358|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	NM_175486|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	BC115775|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene	BC116708|6430571L13Rik|235599|RIKEN cDNA 6430571L13 gene
mm9_v1_chr9_+_68501551_68501608	0.602992	AAGUGCU	AK086033|Rora|19883|RAR-related orphan receptor alpha	NM_013646|Rora|19883|RAR-related orphan receptor alpha	U53228|Rora|19883|RAR-related orphan receptor alpha
mm9_v1_chr5_-_124199380_124199422	0.57849	AAGUGCU	BC008229|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK012697|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK077854|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK166941|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK168476|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK017771|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005523|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005525|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_025438|Rsrc2|208606|arginine/serine-rich coiled-coil 2
mm9_v1_chr5_+_77694506_77694565	0.551807	AAGUGCU	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr7_-_36587975_36588025	0.550451	AAGUGCU	AK129283|Zfp507|668501|zinc finger protein 507	BC050041|Zfp507|668501|zinc finger protein 507	AK142141|Zfp507|668501|zinc finger protein 507	NM_177739|Zfp507|668501|zinc finger protein 507	AK172290|E130304I02Rik|78547|RIKEN cDNA E130304I02 gene
mm9_v1_chr5_+_138526303_138526341	0.542605	AAGUGCU	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr9_+_27598853_27598893	0.538596	AAGUGCU	BC076581|Opcml|330908|opioid binding protein/cell adhesion molecule-like	NM_177906|Opcml|330908|opioid binding protein/cell adhesion molecule-like	AK013792|Opcml|330908|opioid binding protein/cell adhesion molecule-like
mm9_v1_chr11_+_105898183_105898284	0.514896	AAGUGCU	AK047435|Dcaf7|71833|DDB1 and CUL4 associated factor 7	NM_027946|Dcaf7|71833|DDB1 and CUL4 associated factor 7	AK005902|Dcaf7|71833|DDB1 and CUL4 associated factor 7	AK154757|Dcaf7|71833|DDB1 and CUL4 associated factor 7	AK165674|Dcaf7|71833|DDB1 and CUL4 associated factor 7	AK080823|Dcaf7|71833|DDB1 and CUL4 associated factor 7	AK137813|Dcaf7|71833|DDB1 and CUL4 associated factor 7	BC048722|Dcaf7|71833|DDB1 and CUL4 associated factor 7	BC048165|Dcaf7|71833|DDB1 and CUL4 associated factor 7
mm9_v1_chr16_+_57353389_57353389	0.513008	AAGUGCU	AK146705|Filip1l|78749|filamin A interacting protein 1-like	NM_001040397|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr1_-_38954933_38955026	0.511857	AAGUGCU	BC056956|Chst10|98388|carbohydrate sulfotransferase 10	AK047378|Chst10|98388|carbohydrate sulfotransferase 10	NM_145142|Chst10|98388|carbohydrate sulfotransferase 10	AK050676|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chr2_+_25036276_25036300	0.504526	AAGUGCU	AY046077|Nrarp|67122|Notch-regulated ankyrin repeat protein	NM_025980|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC020293|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC048088|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr6_-_52859613_52859613	0.500109	AAGUGCU	BC048577|Jazf1|231986|JAZF zinc finger 1	NM_001168277|Jazf1|231986|JAZF zinc finger 1
mm9_v1_chr19_+_5689130_5689130	0.483719	AAGUGCU	BC095963|Map3k11|26403|mitogen-activated protein kinase kinase kinase 11	NM_022012|Map3k11|26403|mitogen-activated protein kinase kinase kinase 11
mm9_v1_chr11_-_34108053_34108088	0.480683	AAGUGCU	BC007475|Foxi1|14233|forkhead box I1	AK019994|Foxi1|14233|forkhead box I1	NM_023907|Foxi1|14233|forkhead box I1
mm9_v1_chr5_-_136020946_136020998	0.469063	AAGUGCU	AK147246|Hip1|215114|huntingtin interacting protein 1	AK147269|Hip1|215114|huntingtin interacting protein 1	AK166346|Hip1|215114|huntingtin interacting protein 1	AK011828|Hip1|215114|huntingtin interacting protein 1	BC017516|Hip1|215114|huntingtin interacting protein 1	AK087586|Hip1|215114|huntingtin interacting protein 1	NM_146001|Hip1|215114|huntingtin interacting protein 1
mm9_v1_chr11_-_77421308_77421363	0.46505	AAGUGCU	AK143530|Taok1|216965|TAO kinase 1	NM_144825|Taok1|216965|TAO kinase 1
mm9_v1_chr13_-_38726917_38726993	0.456741	AAGUGCU	AK075808|Muted|17828|muted	AK170614|Muted|17828|muted	AK039050|Muted|17828|muted	BC024720|Muted|17828|muted	AK147762|Muted|17828|muted	AK171537|Muted|17828|muted	AF426433|Muted|17828|muted	NM_139063|Muted|17828|muted
mm9_v1_chr16_+_91225794_91225820	0.445593	AAGUGCU	BC051967|Olig2|50913|oligodendrocyte transcription factor 2	NM_016967|Olig2|50913|oligodendrocyte transcription factor 2	AB038697|Olig2|50913|oligodendrocyte transcription factor 2	AK080615|Olig2|50913|oligodendrocyte transcription factor 2
mm9_v1_chr3_-_133207209_133207353	0.438698	AAGUGCU	AK155776|Tet2|214133|tet oncogene family member 2	DQ079067|Tet2|214133|tet oncogene family member 2	NM_001040400|Tet2|214133|tet oncogene family member 2
mm9_v1_chr15_+_41278949_41279049	0.426335	AAGUGCU	NM_001130166|Oxr1|170719|oxidation resistance 1	AK158703|Oxr1|170719|oxidation resistance 1
mm9_v1_chr5_-_67819037_67819037	0.425525	AAGUGCU	NM_001164806|Bend4|666938|BEN domain containing 4
mm9_v1_chr6_+_140571183_140571183	0.423799	AAGUGCU	AK029011|Aebp2|11569|AE binding protein 2	NM_178803|Aebp2|11569|AE binding protein 2
mm9_v1_chr13_-_97312427_97312533	0.410633	AAGUGCU	AB027563|Polk|27015|polymerase (DNA directed), kappa	AF163571|Polk|27015|polymerase (DNA directed), kappa	NM_012048|Polk|27015|polymerase (DNA directed), kappa	AK138299|Polk|27015|polymerase (DNA directed), kappa	BC052820|Polk|27015|polymerase (DNA directed), kappa	AK042272|Polk|27015|polymerase (DNA directed), kappa
mm9_v1_chr2_+_91297678_91297857	0.403942	AAGUGCU	NM_001145857|Lrp4|228357|low density lipoprotein receptor-related protein 4	NM_172668|Lrp4|228357|low density lipoprotein receptor-related protein 4	BC132240|Lrp4|228357|low density lipoprotein receptor-related protein 4	AF247637|Lrp4|228357|low density lipoprotein receptor-related protein 4
mm9_v1_chr11_+_74644411_74644428	0.384058	AAGUGCU	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr3_+_89856713_89856975	0.375003	AAGUGCU	NM_025762|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	NM_027500|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK034749|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150324|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150423|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150831|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151002|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151263|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK017833|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC018438|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK051238|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC027190|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK214769|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AY533135|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr6_-_41586378_41586413	0.36497	AAGUGCU	AK085123|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	AK168760|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	NM_022413|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6
mm9_v1_chr11_-_86621130_86621161	0.357633	AAGUGCU	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr12_+_82732188_82732357	0.357247	AAGUGCU	AK172918|Ttc9|69480|tetratricopeptide repeat domain 9	BC028891|Ttc9|69480|tetratricopeptide repeat domain 9	AK133456|Ttc9|69480|tetratricopeptide repeat domain 9	NM_001033149|Ttc9|69480|tetratricopeptide repeat domain 9	BC139242|Ttc9|69480|tetratricopeptide repeat domain 9	BC139244|Ttc9|69480|tetratricopeptide repeat domain 9
mm9_v1_chr9_-_112090150_112090479	0.343508	AAGUGCU	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr2_-_125549883_125549883	0.332648	AAGUGCU	AK036946|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4	NM_199022|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4
mm9_v1_chr4_-_147278927_147279021	0.319131	AAGUGCU	NM_133201|Mfn2|170731|mitofusin 2
mm9_v1_chr17_+_72131286_72131286	0.316113	AAGUGCU	BC035226|Clip4|78785|CAP-GLY domain containing linker protein family, member 4	NM_030179|Clip4|78785|CAP-GLY domain containing linker protein family, member 4
mm9_v1_chr6_+_21166108_21166108	0.304557	AAGUGCU	BC079667|Kcnd2|16508|potassium voltage-gated channel, Shal-related family, member 2	NM_019697|Kcnd2|16508|potassium voltage-gated channel, Shal-related family, member 2
mm9_v1_chr4_+_33295965_33295965	0.304218	AAGUGCU	AK046869|Srsf13b|272009|serine/arginine-rich splicing factor 13B	NM_177774|Srsf13b|272009|serine/arginine-rich splicing factor 13B
mm9_v1_chr18_-_10706693_10706710	0.290869	AAGUGCU	AF429302|Abhd3|106861|abhydrolase domain containing 3	BC026770|Abhd3|106861|abhydrolase domain containing 3	NM_134130|Abhd3|106861|abhydrolase domain containing 3	AK134676|Abhd3|106861|abhydrolase domain containing 3	AK144238|Abhd3|106861|abhydrolase domain containing 3
mm9_v1_chr2_-_39081799_39081884	0.282324	AAGUGCU	AK002764|Ppp6c|67857|protein phosphatase 6, catalytic subunit	AK009104|Ppp6c|67857|protein phosphatase 6, catalytic subunit	NM_024209|Ppp6c|67857|protein phosphatase 6, catalytic subunit	BC002223|Ppp6c|67857|protein phosphatase 6, catalytic subunit
mm9_v1_chr14_-_104243379_104243389	0.280842	AAGUGCU	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr6_-_12699189_12699252	0.279241	AAGUGCU	NM_001164805|Thsd7a|330267|thrombospondin, type I, domain containing 7A
mm9_v1_chr12_-_99972803_99972854	0.275183	AAGUGCU	D37801|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK013777|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK030456|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_011877|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr7_-_134028480_134028480	0.271353	AAGUGCU	NM_001163774|Taok2|381921|TAO kinase 2	NM_001163775|Taok2|381921|TAO kinase 2
mm9_v1_chr18_+_37303622_37303622	0.256501	AAGUGCU	AY013769|Pcdhac2|353237|protocadherin alpha subfamily C, 2	NM_001003672|Pcdhac2|353237|protocadherin alpha subfamily C, 2
mm9_v1_chr12_+_88288287_88288431	0.251751	AAGUGCU	NM_173735|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK165964|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK154476|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	BC026384|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK122546|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene	AK160643|2310044G17Rik|217732|RIKEN cDNA 2310044G17 gene
mm9_v1_chr2_-_104334610_104334646	0.236829	AAGUGCU	NM_001145824|Hipk3|15259|homeodomain interacting protein kinase 3	NM_010434|Hipk3|15259|homeodomain interacting protein kinase 3
mm9_v1_chr11_+_4157570_4157570	0.233823	AAGUGCU	NM_008501|Lif|16878|leukemia inhibitory factor
mm9_v1_chr16_-_37385024_37385045	0.232057	AAGUGCU	AK043658|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114611|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114612|Stxbp5l|207227|syntaxin binding protein 5-like	NM_001114613|Stxbp5l|207227|syntaxin binding protein 5-like	NM_172440|Stxbp5l|207227|syntaxin binding protein 5-like
mm9_v1_chr3_-_27052733_27052775	0.230253	AAGUGCU	AK040174|Ect2|13605|ect2 oncogene	BC045614|Ect2|13605|ect2 oncogene	BC025565|Ect2|13605|ect2 oncogene	BC032155|Ect2|13605|ect2 oncogene	BC023881|Ect2|13605|ect2 oncogene	AK157718|Ect2|13605|ect2 oncogene	L11316|Ect2|13605|ect2 oncogene	AK220452|Ect2|13605|ect2 oncogene	NM_001177625|Ect2|13605|ect2 oncogene	NM_007900|Ect2|13605|ect2 oncogene
mm9_v1_chr11_-_97436439_97436456	0.221902	AAGUGCU	AF040944|Srcin1|56013|SRC kinase signaling inhibitor 1	NM_018873|Srcin1|56013|SRC kinase signaling inhibitor 1	U59873|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chrX_+_99044723_99044723	0.214588	AAGUGCU	AK142977|Nhsl2|100042480|NHS-like 2	NM_001163610|Nhsl2|100042480|NHS-like 2
mm9_v1_chr18_+_37120093_37120209	0.210161	AAGUGCU	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr4_+_28740280_28740313	0.209886	AAGUGCU	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chr5_+_123157541_123157662	0.209775	AAGUGCU	NM_011026|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK150351|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK041904|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK163104|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162498|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC002099|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK162820|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	BC005597|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AK153427|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089751|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AF089752|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251459|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251460|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251461|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4	AJ251462|P2rx4|18438|purinergic receptor P2X, ligand-gated ion channel 4
mm9_v1_chr15_+_41620484_41620584	0.200668	AAGUGCU	NM_001130165|Oxr1|170719|oxidation resistance 1	BC089183|Oxr1|170719|oxidation resistance 1
mm9_v1_chr6_-_92133945_92134035	0.194657	AAGUGCU	AK131114|Mrps25|64658|mitochondrial ribosomal protein S25	AK013196|Mrps25|64658|mitochondrial ribosomal protein S25	AK004037|Mrps25|64658|mitochondrial ribosomal protein S25	BC022953|Mrps25|64658|mitochondrial ribosomal protein S25	NM_025578|Mrps25|64658|mitochondrial ribosomal protein S25
mm9_v1_chr11_+_102146273_102146324	0.186052	AAGUGCU	AK132118|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	NM_028076|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK157408|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	BC016187|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2	AK008158|Tmub2|72053|transmembrane and ubiquitin-like domain containing 2
mm9_v1_chr11_-_50105794_50105864	0.178976	AAGUGCU	AY442299|Maml1|103806|mastermind like 1 (Drosophila)	AK129088|Maml1|103806|mastermind like 1 (Drosophila)	NM_175334|Maml1|103806|mastermind like 1 (Drosophila)
mm9_v1_chrX_-_71330931_71331012	0.157337	AAGUGCU	AF158181|Mecp2|17257|methyl CpG binding protein 2	NM_010788|Mecp2|17257|methyl CpG binding protein 2	AK041453|Mecp2|17257|methyl CpG binding protein 2	BC027153|Mecp2|17257|methyl CpG binding protein 2	AK158664|Mecp2|17257|methyl CpG binding protein 2	NM_001081979|Mecp2|17257|methyl CpG binding protein 2
mm9_v1_chr7_-_54213800_54213896	0.156887	AAGUGCU	AK018394|Uevld|54122|UEV and lactate/malate dehyrogenase domains	AK155685|Uevld|54122|UEV and lactate/malate dehyrogenase domains	AK154536|Uevld|54122|UEV and lactate/malate dehyrogenase domains	U97571|Uevld|54122|UEV and lactate/malate dehyrogenase domains	NM_001040695|Uevld|54122|UEV and lactate/malate dehyrogenase domains	BC054796|Uevld|54122|UEV and lactate/malate dehyrogenase domains
mm9_v1_chr13_-_12199109_12199211	0.149531	AAGUGCU	BC043140|Ryr2|20191|ryanodine receptor 2, cardiac	BC059061|Ryr2|20191|ryanodine receptor 2, cardiac	NM_023868|Ryr2|20191|ryanodine receptor 2, cardiac
mm9_v1_chr15_-_50721552_50721725	0.145022	AAGUGCU	BC099962|Trps1|83925|trichorhinophalangeal syndrome I (human)	AF346836|Trps1|83925|trichorhinophalangeal syndrome I (human)	NM_032000|Trps1|83925|trichorhinophalangeal syndrome I (human)
mm9_v1_chr14_-_58364879_58364959	0.144806	AAGUGCU	AK164789|Lats2|50523|large tumor suppressor 2	BC053028|Lats2|50523|large tumor suppressor 2	AK029966|Lats2|50523|large tumor suppressor 2	AK029242|Lats2|50523|large tumor suppressor 2	AK029870|Lats2|50523|large tumor suppressor 2	AK163607|Lats2|50523|large tumor suppressor 2	BC024819|Lats2|50523|large tumor suppressor 2	AK081190|Lats2|50523|large tumor suppressor 2	NM_015771|Lats2|50523|large tumor suppressor 2
mm9_v1_chr7_-_72301384_72301483	0.132378	AAGUGCU	NM_183087|Fam189a1|70638|family with sequence similarity 189, member A1
mm9_v1_chr9_-_20189550_20189620	0.124616	AAGUGCU	AK006129|Zfp560|434377|zinc finger protein 560	AK012259|Zfp560|434377|zinc finger protein 560	AK009475|Zfp560|434377|zinc finger protein 560	AK009542|Zfp560|434377|zinc finger protein 560	AK010001|Zfp560|434377|zinc finger protein 560	BC141211|Zfp560|434377|zinc finger protein 560	AK141494|Zfp560|434377|zinc finger protein 560	NM_001004190|Zfp560|434377|zinc finger protein 560	AK012062|Zfp560|434377|zinc finger protein 560
mm9_v1_chr7_-_74790088_74790121	0.108493	AAGUGCU	AK004904|Lrrc28|67867|leucine rich repeat containing 28	AK008713|Lrrc28|67867|leucine rich repeat containing 28	AK159417|Lrrc28|67867|leucine rich repeat containing 28	AK050154|Lrrc28|67867|leucine rich repeat containing 28	AK077270|Lrrc28|67867|leucine rich repeat containing 28	NM_027413|Lrrc28|67867|leucine rich repeat containing 28	NM_175124|Lrrc28|67867|leucine rich repeat containing 28
mm9_v1_chr14_-_73109722_73109912	0.10588	AAGUGCU	AK089380|Fndc3a|319448|fibronectin type III domain containing 3A	AK032733|Fndc3a|319448|fibronectin type III domain containing 3A	AK164398|Fndc3a|319448|fibronectin type III domain containing 3A	AK048586|Fndc3a|319448|fibronectin type III domain containing 3A	DQ192036|Fndc3a|319448|fibronectin type III domain containing 3A	NM_207636|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr12_+_107022903_107023027	0.0945457	AAGUGCU	NM_011112|Papola|18789|poly (A) polymerase alpha	AK028940|Papola|18789|poly (A) polymerase alpha	AK090096|Papola|18789|poly (A) polymerase alpha	AK132704|Papola|18789|poly (A) polymerase alpha	AK134552|Papola|18789|poly (A) polymerase alpha	BC060128|Papola|18789|poly (A) polymerase alpha	U58134|Papola|18789|poly (A) polymerase alpha	U52197|Papola|18789|poly (A) polymerase alpha
mm9_v1_chr15_+_37162790_37162813	0.0919505	AAGUGCU	AK002633|Grhl2|252973|grainyhead-like 2 (Drosophila)	NM_026496|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr19_-_53465036_53465068	0.0832973	AAGUGCU	AK168575|Smndc1|76479|survival motor neuron domain containing 1	BC058779|Smndc1|76479|survival motor neuron domain containing 1	AK010395|Smndc1|76479|survival motor neuron domain containing 1	AK078834|Smndc1|76479|survival motor neuron domain containing 1	AK090047|Smndc1|76479|survival motor neuron domain containing 1	NM_172429|Smndc1|76479|survival motor neuron domain containing 1
mm9_v1_chrX_+_159198302_159198437	0.0774566	AAGUGCU	NM_009031|Rbbp7|245688|retinoblastoma binding protein 7	AK146439|Rbbp7|245688|retinoblastoma binding protein 7	AK147062|Rbbp7|245688|retinoblastoma binding protein 7	AK153913|Rbbp7|245688|retinoblastoma binding protein 7	AK148852|Rbbp7|245688|retinoblastoma binding protein 7	U35142|Rbbp7|245688|retinoblastoma binding protein 7	BC003785|Rbbp7|245688|retinoblastoma binding protein 7	AK076016|Rbbp7|245688|retinoblastoma binding protein 7	AK135779|Rbbp7|245688|retinoblastoma binding protein 7	AK135956|Rbbp7|245688|retinoblastoma binding protein 7	AK078349|Rbbp7|245688|retinoblastoma binding protein 7	AK082892|Rbbp7|245688|retinoblastoma binding protein 7	AK136110|Rbbp7|245688|retinoblastoma binding protein 7	AK145531|Rbbp7|245688|retinoblastoma binding protein 7	AK146014|Rbbp7|245688|retinoblastoma binding protein 7	AK146904|Rbbp7|245688|retinoblastoma binding protein 7	AK146967|Rbbp7|245688|retinoblastoma binding protein 7	AK160023|Rbbp7|245688|retinoblastoma binding protein 7	AK132101|Rbbp7|245688|retinoblastoma binding protein 7	AK145651|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr5_-_147032932_147033023	0.0706732	AAGUGCU	AY039004|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK049503|Rnf6|74132|ring finger protein (C3H2C3 type) 6	BC138545|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK004745|Rnf6|74132|ring finger protein (C3H2C3 type) 6	NM_028774|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chr1_-_182627107_182627164	0.0695872	AAGUGCU	AF201959|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AF135063|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AB221547|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AF154573|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	BC099876|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	BC099877|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	NM_013729|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)
mm9_v1_chr18_+_64414012_64414029	0.0556142	AAGUGCU	AK161482|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_009182|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK015874|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr11_+_35582969_35582996	0.0545851	AAGUGCU	AK039865|Pank3|211347|pantothenate kinase 3	NM_145962|Pank3|211347|pantothenate kinase 3
mm9_v1_chr17_+_27993426_27993458	0.0540926	AAGUGCU	AK089790|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK144200|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK220293|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	NM_001080769|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1
mm9_v1_chr14_-_79647102_79647173	0.031246	AAGUGCU	AK139686|Zfp957|105590|zinc finger protein 957	NM_001033215|Zfp957|105590|zinc finger protein 957
mm9_v1_chr3_-_35828995_35828995	0.0290282	AAGUGCU	AK139845|Dcun1d1|114893|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	NM_033623|Dcun1d1|114893|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
