mm9_v1_chr18_+_67293403_67293479	6.98237	AUGACAC	AK032407|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	AY179169|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	NM_010307|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm9_v1_chr4_-_126430511_126430686	6.94044	AUGACAC	BC017126|Ncdn|26562|neurochondrin	AK154889|Ncdn|26562|neurochondrin	AK170502|Ncdn|26562|neurochondrin	NM_011986|Ncdn|26562|neurochondrin
mm9_v1_chr1_-_134539434_134539434	5.99277	AUGACAC	NM_001160316|Nfasc|269116|neurofascin
mm9_v1_chr1_-_134638361_134638397	4.92358	AUGACAC	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr1_-_134603848_134603902	4.89216	AUGACAC	AK129207|Nfasc|269116|neurofascin	NM_001160318|Nfasc|269116|neurofascin
mm9_v1_chr13_-_25361773_25361915	4.78196	AUGACAC	AK138191|Nrsn1|22360|neurensin 1	D83206|Nrsn1|22360|neurensin 1	AK160941|Nrsn1|22360|neurensin 1	NM_009513|Nrsn1|22360|neurensin 1
mm9_v1_chr18_+_67247984_67247998	4.47357	AUGACAC	AK045484|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	BC078439|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	NM_177137|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm9_v1_chr13_+_19040215_19040285	4.34346	AUGACAC	AK132168|Amph|218038|amphiphysin	BC054718|Amph|218038|amphiphysin	NM_175007|Amph|218038|amphiphysin	AK047144|Amph|218038|amphiphysin
mm9_v1_chr1_-_83404659_83404774	4.14674	AUGACAC	AK020841|Sphkap|77629|SPHK1 interactor, AKAP domain containing	AK034183|Sphkap|77629|SPHK1 interactor, AKAP domain containing	AK038638|Sphkap|77629|SPHK1 interactor, AKAP domain containing	BC069832|Sphkap|77629|SPHK1 interactor, AKAP domain containing	NM_172430|Sphkap|77629|SPHK1 interactor, AKAP domain containing
mm9_v1_chr12_+_90191833_90191842	3.74933	AUGACAC	NM_172544|Nrxn3|18191|neurexin III	AK032126|Nrxn3|18191|neurexin III
mm9_v1_chr12_+_4082573_4082658	3.36846	AUGACAC	NM_153082|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC051140|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	AK049300|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC042643|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr2_+_157385835_157385932	3.29084	AUGACAC	AK003004|Nnat|18111|neuronatin	AK077465|Nnat|18111|neuronatin	AK160626|Nnat|18111|neuronatin	NM_010923|Nnat|18111|neuronatin	NM_180960|Nnat|18111|neuronatin	X83569|Nnat|18111|neuronatin	X83570|Nnat|18111|neuronatin	BC036984|Nnat|18111|neuronatin	AB004048|Nnat|18111|neuronatin	X83568|Nnat|18111|neuronatin
mm9_v1_chr3_+_13946371_13946410	3.27285	AUGACAC	NM_001163329|Ralyl|76897|RALY RNA binding protein-like	NM_001163330|Ralyl|76897|RALY RNA binding protein-like	AK038465|Ralyl|76897|RALY RNA binding protein-like	BC052358|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr2_+_49474775_49474833	3.26657	AUGACAC	BC067051|Kif5c|16574|kinesin family member 5C	NM_008449|Kif5c|16574|kinesin family member 5C
mm9_v1_chr1_+_17135421_17135611	3.22645	AUGACAC	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr9_-_29770699_29770842	3.10206	AUGACAC	AK138263|Ntm|235106|neurotrimin	AK045973|Ntm|235106|neurotrimin	AK046377|Ntm|235106|neurotrimin	NM_172290|Ntm|235106|neurotrimin	AK042854|Ntm|235106|neurotrimin	AK140516|Ntm|235106|neurotrimin	AK020998|Ntm|235106|neurotrimin	AK020745|Ntm|235106|neurotrimin
mm9_v1_chr4_-_86876328_86876443	3.00294	AUGACAC	AK038800|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK136058|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_172426|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr1_+_154802198_154802230	2.99854	AUGACAC	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr3_+_28680223_28680237	2.79889	AUGACAC	AY205262|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AY205263|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AY205264|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AY205265|Eif5a2|208691|eukaryotic translation initiation factor 5A2	NM_177586|Eif5a2|208691|eukaryotic translation initiation factor 5A2	AK036127|Eif5a2|208691|eukaryotic translation initiation factor 5A2
mm9_v1_chr1_+_20880692_20880724	2.66123	AUGACAC	AK147376|Paqr8|74229|progestin and adipoQ receptor family member VIII	BC059813|Paqr8|74229|progestin and adipoQ receptor family member VIII	NM_028829|Paqr8|74229|progestin and adipoQ receptor family member VIII
mm9_v1_chr2_-_32702729_32702816	2.65719	AUGACAC	NM_009295|Stxbp1|20910|syntaxin binding protein 1	NM_001113569|Stxbp1|20910|syntaxin binding protein 1
mm9_v1_chr18_-_43847367_43847426	2.55394	AUGACAC	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr9_-_83699706_83699913	2.52617	AUGACAC	AF277093|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	AK029065|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	BC037030|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	NM_001145974|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	AK030666|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4	NM_148941|Elovl4|83603|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
mm9_v1_chr11_+_42233258_42233286	2.49868	AUGACAC	AK090279|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	NM_008070|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145973|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145975|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm9_v1_chr15_+_100766701_100766755	2.37216	AUGACAC	NM_011323|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	U26707|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AF049617|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr15_+_100701068_100701116	2.33326	AUGACAC	NM_001077499|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha	AK158609|Scn8a|20273|sodium channel, voltage-gated, type VIII, alpha
mm9_v1_chr10_+_5151833_5151833	2.3093	AUGACAC	AK041626|Syne1|64009|synaptic nuclear envelope 1	NM_001079686|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr10_+_5277477_5277627	2.29851	AUGACAC	BC054456|Syne1|64009|synaptic nuclear envelope 1	NM_022027|Syne1|64009|synaptic nuclear envelope 1	AK036828|Syne1|64009|synaptic nuclear envelope 1	BC110428|Syne1|64009|synaptic nuclear envelope 1	AF281869|Syne1|64009|synaptic nuclear envelope 1	AK164813|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chrX_+_99044723_99044723	2.29399	AUGACAC	AK142977|Nhsl2|100042480|NHS-like 2	NM_001163610|Nhsl2|100042480|NHS-like 2
mm9_v1_chr12_-_77923303_77923517	2.26703	AUGACAC	AB232610|Rab15|104886|RAB15, member RAS oncogene family	AK158637|Rab15|104886|RAB15, member RAS oncogene family	BC013790|Rab15|104886|RAB15, member RAS oncogene family	AK158768|Rab15|104886|RAB15, member RAS oncogene family	BC027769|Rab15|104886|RAB15, member RAS oncogene family	NM_134050|Rab15|104886|RAB15, member RAS oncogene family
mm9_v1_chr4_+_102260162_102260162	2.19078	AUGACAC	AK161341|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177982|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr3_+_75361454_75361503	2.19071	AUGACAC	NM_009250|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK032152|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK133770|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	BC006776|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AJ001700|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm9_v1_chr13_+_54472705_54472742	2.13258	AUGACAC	NM_009946|Cplx2|12890|complexin 2
mm9_v1_chr17_-_32925218_32925259	2.11584	AUGACAC	AK029041|Zfp871|208292|zinc finger protein 871	NM_172458|Zfp871|208292|zinc finger protein 871
mm9_v1_chr10_+_90038471_90038471	2.11062	AUGACAC	BC098373|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177397|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr7_-_89079335_89079355	2.10813	AUGACAC	AK045542|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3	NM_013886|Hdgfrp3|29877|hepatoma-derived growth factor, related protein 3
mm9_v1_chr6_+_108163089_108163111	2.07938	AUGACAC	AK047719|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	AK137477|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	NM_010585|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	X15373|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1
mm9_v1_chr12_+_89961317_89961336	2.01063	AUGACAC	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr4_-_86873866_86873867	1.99953	AUGACAC	NM_001110240|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC115867|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC116637|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chrX_-_104598651_104598723	1.98729	AUGACAC	AK135229|Itm2a|16431|integral membrane protein 2A	BC031420|Itm2a|16431|integral membrane protein 2A	AK051956|Itm2a|16431|integral membrane protein 2A	AK167351|Itm2a|16431|integral membrane protein 2A	L38971|Itm2a|16431|integral membrane protein 2A	NM_008409|Itm2a|16431|integral membrane protein 2A
mm9_v1_chr1_-_145624156_145624181	1.97967	AUGACAC	AK076167|Trove2|20822|TROVE domain family, member 2	NM_013835|Trove2|20822|TROVE domain family, member 2
mm9_v1_chr4_+_102242664_102242699	1.9357	AUGACAC	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr6_-_57485419_57485488	1.93419	AUGACAC	BC092238|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	NM_175523|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)	AK044610|Ppm1k|243382|protein phosphatase 1K (PP2C domain containing)
mm9_v1_chr11_-_87172419_87172533	1.92206	AUGACAC	AK053696|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138900|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	BC138903|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)	NM_177167|Ppm1e|320472|protein phosphatase 1E (PP2C domain containing)
mm9_v1_chr17_-_57199207_57199302	1.85038	AUGACAC	BC072660|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	NM_025877|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr15_-_84277488_84277526	1.79795	AUGACAC	BC119234|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	BC120551|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	BC062953|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	NM_001163145|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene
mm9_v1_chr15_+_54577256_54577521	1.7852	AUGACAC	AK081944|Nov|18133|nephroblastoma overexpressed gene	AK081310|Nov|18133|nephroblastoma overexpressed gene	AK136407|Nov|18133|nephroblastoma overexpressed gene	AK155048|Nov|18133|nephroblastoma overexpressed gene	BC003774|Nov|18133|nephroblastoma overexpressed gene	NM_010930|Nov|18133|nephroblastoma overexpressed gene	X96585|Nov|18133|nephroblastoma overexpressed gene	AK039481|Nov|18133|nephroblastoma overexpressed gene	Y09257|Nov|18133|nephroblastoma overexpressed gene
mm9_v1_chr1_+_72629814_72629847	1.76149	AUGACAC	NM_018817|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK146767|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK169465|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK154020|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AF088884|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK042332|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK077878|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK083488|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	AK035854|Smarcal1|54380|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
mm9_v1_chr4_+_102262447_102262471	1.73725	AUGACAC	AK051102|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177981|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC071259|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chrX_-_159081510_159081550	1.68135	AUGACAC	AY263368|Reps2|194590|RALBP1 associated Eps domain containing protein 2	NM_178256|Reps2|194590|RALBP1 associated Eps domain containing protein 2
mm9_v1_chr7_+_63305516_63305584	1.65715	AUGACAC	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr6_-_112897259_112897274	1.62642	AUGACAC	AK045508|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	AK051262|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	NM_080448|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr18_-_70212948_70213022	1.6019	AUGACAC	BC032928|Rab27b|80718|RAB27b, member RAS oncogene family	AB067775|Rab27b|80718|RAB27b, member RAS oncogene family	AF328893|Rab27b|80718|RAB27b, member RAS oncogene family	BC018443|Rab27b|80718|RAB27b, member RAS oncogene family	NM_030554|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr12_+_80130149_80130201	1.55261	AUGACAC	NM_181073|Plekhh1|211945|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	AK122464|Plekhh1|211945|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm9_v1_chr11_-_50641191_50641232	1.51888	AUGACAC	AK086760|Zfp354c|30944|zinc finger protein 354C	AK220194|Zfp354c|30944|zinc finger protein 354C	AK145882|Zfp354c|30944|zinc finger protein 354C	BC079908|Zfp354c|30944|zinc finger protein 354C	NM_013922|Zfp354c|30944|zinc finger protein 354C
mm9_v1_chr2_+_134611879_134611910	1.49012	AUGACAC	AK143153|Plcb1|18795|phospholipase C, beta 1	NM_001145830|Plcb1|18795|phospholipase C, beta 1	NM_019677|Plcb1|18795|phospholipase C, beta 1	AK040911|Plcb1|18795|phospholipase C, beta 1
mm9_v1_chr5_+_22252006_22252042	1.48435	AUGACAC	NM_001081231|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	NM_029990|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	AK033906|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3	AK020916|Lhfpl3|269629|lipoma HMGIC fusion partner-like 3
mm9_v1_chrX_+_100551808_100551914	1.45607	AUGACAC	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr10_-_49508472_49508559	1.41599	AUGACAC	D10054|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	AK141539|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_001111268|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)	NM_010349|Grik2|14806|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm9_v1_chr6_-_122692754_122692762	1.38136	AUGACAC	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr2_-_156817751_156817861	1.34501	AUGACAC	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr18_-_70301202_70301243	1.33597	AUGACAC	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr7_-_148623725_148623772	1.33381	AUGACAC	BC050887|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	NM_026646|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm9_v1_chr15_-_36426543_36426556	1.32773	AUGACAC	BC035553|Ankrd46|68839|ankyrin repeat domain 46	NM_175134|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr2_+_65683823_65683911	1.28968	AUGACAC	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr1_+_196446006_196446022	1.27957	AUGACAC	NM_008882|Plxna2|18845|plexin A2
mm9_v1_chr7_-_148620437_148620500	1.20345	AUGACAC	AK162400|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	BC037949|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	AK155276|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	NM_001177576|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm9_v1_chr14_-_61656804_61656823	1.19517	AUGACAC	NM_001164155|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chr18_+_23962468_23962588	1.18671	AUGACAC	NM_153058|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK038562|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK140595|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK040767|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045904|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148954|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046221|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC027056|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC035254|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC025804|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK050527|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148480|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046095|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK088734|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC028987|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045493|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr10_+_94977721_94977835	1.17097	AUGACAC	AK005302|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK161968|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AK005788|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC067069|Ube2n|93765|ubiquitin-conjugating enzyme E2N	NM_080560|Ube2n|93765|ubiquitin-conjugating enzyme E2N	AY039837|Ube2n|93765|ubiquitin-conjugating enzyme E2N	Y09873|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC034898|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC052203|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC132630|Ube2n|93765|ubiquitin-conjugating enzyme E2N	BC138211|Ube2n|93765|ubiquitin-conjugating enzyme E2N
mm9_v1_chr18_+_23910833_23910892	1.16065	AUGACAC	AK158570|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162942|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK168834|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr19_+_53217238_53217304	1.15094	AUGACAC	NM_001164100|Add3|27360|adducin 3 (gamma)	AK144174|Add3|27360|adducin 3 (gamma)
mm9_v1_chr2_-_91489909_91489949	1.14352	AUGACAC	AK132515|Zfp408|381410|zinc finger protein 408	NM_001033451|Zfp408|381410|zinc finger protein 408
mm9_v1_chr3_-_32264572_32264614	1.13972	AUGACAC	NM_009517|Zmat3|22401|zinc finger matrin type 3	BC023726|Zmat3|22401|zinc finger matrin type 3
mm9_v1_chr6_-_142912908_142912971	1.10594	AUGACAC	AK046188|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC024821|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	NM_011374|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm9_v1_chrX_-_54756877_54756933	1.09901	AUGACAC	AK138185|Gpr101|245424|G protein-coupled receptor 101	DQ198079|Gpr101|245424|G protein-coupled receptor 101	AK138370|Gpr101|245424|G protein-coupled receptor 101	NM_001033360|Gpr101|245424|G protein-coupled receptor 101
mm9_v1_chr4_-_115690506_115690572	1.09421	AUGACAC	AK079598|Faah|14073|fatty acid amide hydrolase	NM_010173|Faah|14073|fatty acid amide hydrolase	BC052321|Faah|14073|fatty acid amide hydrolase
mm9_v1_chr10_-_75700507_75700611	1.07337	AUGACAC	BC122563|Prmt2|15468|protein arginine N-methyltransferase 2	BC125275|Prmt2|15468|protein arginine N-methyltransferase 2	AF169620|Prmt2|15468|protein arginine N-methyltransferase 2	BC088997|Prmt2|15468|protein arginine N-methyltransferase 2	AK144412|Prmt2|15468|protein arginine N-methyltransferase 2	AK146754|Prmt2|15468|protein arginine N-methyltransferase 2	AK077456|Prmt2|15468|protein arginine N-methyltransferase 2	AK145829|Prmt2|15468|protein arginine N-methyltransferase 2	AK146966|Prmt2|15468|protein arginine N-methyltransferase 2	AK159186|Prmt2|15468|protein arginine N-methyltransferase 2	AK140200|Prmt2|15468|protein arginine N-methyltransferase 2	NM_001077638|Prmt2|15468|protein arginine N-methyltransferase 2	NM_133182|Prmt2|15468|protein arginine N-methyltransferase 2
mm9_v1_chr5_-_23929347_23929348	1.07179	AUGACAC	AK051790|Cdk5|12568|cyclin-dependent kinase 5	NM_007668|Cdk5|12568|cyclin-dependent kinase 5
mm9_v1_chr7_-_4796261_4796301	1.06327	AUGACAC	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr9_-_64101354_64101425	1.04754	AUGACAC	AK167336|Map2k1|26395|mitogen-activated protein kinase kinase 1	AB041567|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146233|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146931|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK165894|Map2k1|26395|mitogen-activated protein kinase kinase 1	NM_008927|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr4_+_56815193_56815243	1.0388	AUGACAC	NM_001081420|BC026590|230234|cDNA sequence BC026590	AK043588|BC026590|230234|cDNA sequence BC026590	BC026590|BC026590|230234|cDNA sequence BC026590
mm9_v1_chr2_+_109533719_109533771	1.03226	AUGACAC	AY057914|Bdnf|12064|brain derived neurotrophic factor	EF125674|Bdnf|12064|brain derived neurotrophic factor	NM_001048142|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr18_+_23912225_23912225	1.01671	AUGACAC	AK028823|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162941|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr18_+_37656644_37656807	0.998863	AUGACAC	AK029163|Pcdhb19|93890|protocadherin beta 19	AK147520|Pcdhb19|93890|protocadherin beta 19	AK160654|Pcdhb19|93890|protocadherin beta 19	NM_053144|Pcdhb19|93890|protocadherin beta 19	AK046363|Pcdhb19|93890|protocadherin beta 19	BC141290|Pcdhb19|93890|protocadherin beta 19	BC141291|Pcdhb19|93890|protocadherin beta 19	AF326312|Pcdhb19|93890|protocadherin beta 19	AY013780|Pcdhb19|93890|protocadherin beta 19
mm9_v1_chr7_-_3645124_3645179	0.975465	AUGACAC	AK154606|Mboat7|77582|membrane bound O-acyltransferase domain containing 7	AB055410|Mboat7|77582|membrane bound O-acyltransferase domain containing 7	NM_029934|Mboat7|77582|membrane bound O-acyltransferase domain containing 7
mm9_v1_chr19_+_53214934_53215104	0.969182	AUGACAC	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr3_-_86724793_86724854	0.959212	AUGACAC	NM_001195496|Dclk2|70762|doublecortin-like kinase 2	NM_001195497|Dclk2|70762|doublecortin-like kinase 2	NM_001195498|Dclk2|70762|doublecortin-like kinase 2	NM_001195499|Dclk2|70762|doublecortin-like kinase 2	NM_001195500|Dclk2|70762|doublecortin-like kinase 2	NM_027539|Dclk2|70762|doublecortin-like kinase 2
mm9_v1_chr2_-_132641694_132641790	0.955044	AUGACAC	BC027565|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	BC052648|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK164396|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK017672|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK165976|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK167222|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK129300|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK028755|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	NM_175113|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)	AK014359|Trmt6|66926|tRNA methyltransferase 6 homolog (S. cerevisiae)
mm9_v1_chr5_-_45190857_45190945	0.95002	AUGACAC	U89487|Ldb2|16826|LIM domain binding 2	U89489|Ldb2|16826|LIM domain binding 2	BC079611|Ldb2|16826|LIM domain binding 2	AK147160|Ldb2|16826|LIM domain binding 2	AK146860|Ldb2|16826|LIM domain binding 2	NM_001077398|Ldb2|16826|LIM domain binding 2	NM_010698|Ldb2|16826|LIM domain binding 2
mm9_v1_chr6_+_86354212_86354404	0.937821	AUGACAC	NM_001164078|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_001164079|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	NM_011585|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK144222|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	AK088486|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC023813|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC046812|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	BC027826|Tia1|21841|cytotoxic granule-associated RNA binding protein 1	U55862|Tia1|21841|cytotoxic granule-associated RNA binding protein 1
mm9_v1_chr19_-_60019266_60019313	0.935587	AUGACAC	AK154916|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)	NM_001033172|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)
mm9_v1_chr13_+_24706474_24706497	0.92466	AUGACAC	AK041665|Fam65b|193385|family with sequence similarity 65, member B	NM_178658|Fam65b|193385|family with sequence similarity 65, member B	AK036452|Fam65b|193385|family with sequence similarity 65, member B	AK040887|Fam65b|193385|family with sequence similarity 65, member B
mm9_v1_chr7_-_125386862_125387193	0.904042	AUGACAC	AK220328|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK041264|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK047829|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK157798|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK049391|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	NM_001031814|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
mm9_v1_chr19_-_5118229_5118407	0.876681	AUGACAC	AF055666|Klc2|16594|kinesin light chain 2	BC014845|Klc2|16594|kinesin light chain 2	AK141439|Klc2|16594|kinesin light chain 2	NM_008451|Klc2|16594|kinesin light chain 2
mm9_v1_chr2_+_179854008_179854109	0.873009	AUGACAC	AK145292|Osbpl2|228983|oxysterol binding protein-like 2	AK170669|Osbpl2|228983|oxysterol binding protein-like 2	NM_144500|Osbpl2|228983|oxysterol binding protein-like 2	BC026804|Osbpl2|228983|oxysterol binding protein-like 2	AK170306|Osbpl2|228983|oxysterol binding protein-like 2	AK166059|Osbpl2|228983|oxysterol binding protein-like 2
mm9_v1_chr10_-_112365976_112366087	0.871631	AUGACAC	AK014824|Atxn7l3b|382423|ataxin 7-like 3B	BC058561|Atxn7l3b|382423|ataxin 7-like 3B	BC047210|Atxn7l3b|382423|ataxin 7-like 3B	BC079579|Atxn7l3b|382423|ataxin 7-like 3B	BC094390|Atxn7l3b|382423|ataxin 7-like 3B	BC030168|Atxn7l3b|382423|ataxin 7-like 3B	AK003631|Atxn7l3b|382423|ataxin 7-like 3B	AK150316|Atxn7l3b|382423|ataxin 7-like 3B	AK135540|Atxn7l3b|382423|ataxin 7-like 3B	AK011696|Atxn7l3b|382423|ataxin 7-like 3B	AK009409|Atxn7l3b|382423|ataxin 7-like 3B	NM_001033474|Atxn7l3b|382423|ataxin 7-like 3B
mm9_v1_chr3_+_13471643_13471656	0.859394	AUGACAC	NM_001163328|Ralyl|76897|RALY RNA binding protein-like	NM_178631|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chrX_-_22942176_22942193	0.857167	AUGACAC	AK004677|Klhl13|67455|kelch-like 13 (Drosophila)	NM_026167|Klhl13|67455|kelch-like 13 (Drosophila)	AK045102|Klhl13|67455|kelch-like 13 (Drosophila)	AK051752|Klhl13|67455|kelch-like 13 (Drosophila)
mm9_v1_chr19_-_60019520_60019556	0.856331	AUGACAC	AK015534|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)	NM_001164367|Rab11fip2|74998|RAB11 family interacting protein 2 (class I)
mm9_v1_chr2_+_150574777_150574886	0.850273	AUGACAC	AK030789|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	NM_172117|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC038126|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC028318|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	AK156685|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6
mm9_v1_chr7_+_106683983_106683997	0.836258	AUGACAC	AK147508|Arrb1|109689|arrestin, beta 1	NM_177231|Arrb1|109689|arrestin, beta 1	NM_178220|Arrb1|109689|arrestin, beta 1
mm9_v1_chr9_-_26837634_26837702	0.82556	AUGACAC	AK155578|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	AK171154|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	BC049180|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	AK031589|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	NM_178027|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr18_+_7869164_7869355	0.819912	AUGACAC	NM_001146298|Wac|225131|WW domain containing adaptor with coiled-coil	NM_153085|Wac|225131|WW domain containing adaptor with coiled-coil	BC080851|Wac|225131|WW domain containing adaptor with coiled-coil
mm9_v1_chrX_+_149932693_149932774	0.810049	AUGACAC	AK076159|Ubqln2|54609|ubiquilin 2	AF177346|Ubqln2|54609|ubiquilin 2	BC053022|Ubqln2|54609|ubiquilin 2	NM_018798|Ubqln2|54609|ubiquilin 2
mm9_v1_chr6_+_47903388_47903510	0.797213	AUGACAC	AK133549|Zfp956|101197|zinc finger protein 956	NM_178898|Zfp956|101197|zinc finger protein 956	AK045736|Zfp956|101197|zinc finger protein 956	BC090657|Zfp956|101197|zinc finger protein 956	AK040541|Zfp956|101197|zinc finger protein 956	AK162106|Zfp956|101197|zinc finger protein 956	BC120581|Zfp956|101197|zinc finger protein 956	BC144752|Zfp956|101197|zinc finger protein 956	BC119280|Zfp956|101197|zinc finger protein 956
mm9_v1_chr9_+_121628258_121628322	0.792542	AUGACAC	AK163916|Nktr|18087|natural killer tumor recognition sequence	L04289|Nktr|18087|natural killer tumor recognition sequence	NM_010918|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr5_+_30607907_30607949	0.771963	AUGACAC	AK140154|Gm1060|381738|predicted gene 1060	NM_001033460|Gm1060|381738|predicted gene 1060	BC150863|Gm1060|381738|predicted gene 1060
mm9_v1_chr15_-_81756568_81756667	0.763655	AUGACAC	AK032967|Polr3h|78929|polymerase (RNA) III (DNA directed) polypeptide H	AK152517|Polr3h|78929|polymerase (RNA) III (DNA directed) polypeptide H	AK019868|Polr3h|78929|polymerase (RNA) III (DNA directed) polypeptide H	NM_030229|Polr3h|78929|polymerase (RNA) III (DNA directed) polypeptide H	BC010793|Polr3h|78929|polymerase (RNA) III (DNA directed) polypeptide H
mm9_v1_chr2_+_54288789_54288827	0.761039	AUGACAC	AK035964|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	AK030726|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	AK038387|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	AK045417|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	NM_173030|Galnt13|271786|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13
mm9_v1_chr14_-_61665691_61665691	0.760169	AUGACAC	NM_013869|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chr3_-_38383688_38383798	0.744408	AUGACAC	AK129484|Ankrd50|99696|ankyrin repeat domain 50	NM_001167883|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr9_-_121614076_121614146	0.730111	AUGACAC	AK029985|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	BC046289|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK031125|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK044249|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_001164562|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_178677|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
mm9_v1_chr7_-_108080671_108080707	0.73003	AUGACAC	NM_001081116|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr10_-_79076744_79076769	0.726628	AUGACAC	BC089008|C2cd4c|237397|C2 calcium-dependent domain containing 4C	NM_198614|C2cd4c|237397|C2 calcium-dependent domain containing 4C	AK029946|C2cd4c|237397|C2 calcium-dependent domain containing 4C	NM_001168624|C2cd4c|237397|C2 calcium-dependent domain containing 4C
mm9_v1_chr12_+_70397667_70397700	0.712621	AUGACAC	AK078408|Klhdc2|69554|kelch domain containing 2	NM_027117|Klhdc2|69554|kelch domain containing 2
mm9_v1_chr2_-_73730605_73730700	0.704002	AUGACAC	AK139844|Atf2|11909|activating transcription factor 2	AK146839|Atf2|11909|activating transcription factor 2	AK139515|Atf2|11909|activating transcription factor 2	BC079883|Atf2|11909|activating transcription factor 2	BC085137|Atf2|11909|activating transcription factor 2	BC082596|Atf2|11909|activating transcription factor 2	AK035438|Atf2|11909|activating transcription factor 2	AK140855|Atf2|11909|activating transcription factor 2	AK144977|Atf2|11909|activating transcription factor 2	AK051591|Atf2|11909|activating transcription factor 2	AK087424|Atf2|11909|activating transcription factor 2	NM_001025093|Atf2|11909|activating transcription factor 2	NM_009715|Atf2|11909|activating transcription factor 2	AK145887|Atf2|11909|activating transcription factor 2
mm9_v1_chr4_-_26273772_26273798	0.700425	AUGACAC	AK030141|Manea|242362|mannosidase, endo-alpha	BC067076|Manea|242362|mannosidase, endo-alpha	NM_172865|Manea|242362|mannosidase, endo-alpha
mm9_v1_chr4_+_101927543_101927649	0.688808	AUGACAC	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr17_+_29169579_29169604	0.687605	AUGACAC	NM_013663|Srsf3|20383|serine/arginine-rich splicing factor 3
mm9_v1_chr12_+_87582805_87582876	0.677125	AUGACAC	BC048169|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK031712|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK006185|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	BC058256|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	NM_027405|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK147916|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	BC050782|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene	AK129299|1700020O03Rik|70373|RIKEN cDNA 1700020O03 gene
mm9_v1_chr7_-_87065480_87065546	0.673227	AUGACAC	U91933|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	BC060236|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	BC028319|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK037336|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK028372|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK083911|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK150085|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	NM_009682|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit
mm9_v1_chr13_+_113450958_113450993	0.671863	AUGACAC	AK020109|Slc38a9|268706|solute carrier family 38, member 9	BC052361|Slc38a9|268706|solute carrier family 38, member 9	NM_178746|Slc38a9|268706|solute carrier family 38, member 9	AK044735|Slc38a9|268706|solute carrier family 38, member 9	AK043402|Slc38a9|268706|solute carrier family 38, member 9	AK034958|Slc38a9|268706|solute carrier family 38, member 9	AK039821|Slc38a9|268706|solute carrier family 38, member 9
mm9_v1_chr16_-_52453104_52453136	0.647831	AUGACAC	AK053201|Alcam|11658|activated leukocyte cell adhesion molecule	AK030851|Alcam|11658|activated leukocyte cell adhesion molecule	NM_009655|Alcam|11658|activated leukocyte cell adhesion molecule
mm9_v1_chr14_+_21493519_21493615	0.641377	AUGACAC	AK036519|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_001168273|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_172596|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK011880|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK122199|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	BC040370|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)
mm9_v1_chr2_-_23904890_23904898	0.641045	AUGACAC	BC033928|Hnmt|140483|histamine N-methyltransferase	AB070524|Hnmt|140483|histamine N-methyltransferase	AF297037|Hnmt|140483|histamine N-methyltransferase	NM_080462|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr7_-_149846916_149846939	0.63964	AUGACAC	NM_001122736|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr4_+_40895538_40895624	0.627904	AUGACAC	AK147058|Chmp5|76959|chromatin modifying protein 5	BC080673|Chmp5|76959|chromatin modifying protein 5	AK008911|Chmp5|76959|chromatin modifying protein 5	NM_029814|Chmp5|76959|chromatin modifying protein 5	BC058756|Chmp5|76959|chromatin modifying protein 5	BC006947|Chmp5|76959|chromatin modifying protein 5
mm9_v1_chr13_-_95055235_95055506	0.627503	AUGACAC	BC034283|Scamp1|107767|secretory carrier membrane protein 1	NM_029153|Scamp1|107767|secretory carrier membrane protein 1	AK135058|Scamp1|107767|secretory carrier membrane protein 1	AK154671|Scamp1|107767|secretory carrier membrane protein 1	AK170343|Scamp1|107767|secretory carrier membrane protein 1
mm9_v1_chr9_-_42752453_42752579	0.61118	AUGACAC	AK032029|Grik4|110637|glutamate receptor, ionotropic, kainate 4	NM_175481|Grik4|110637|glutamate receptor, ionotropic, kainate 4	AK080582|Grik4|110637|glutamate receptor, ionotropic, kainate 4
mm9_v1_chr12_-_27100112_27100136	0.610914	AUGACAC	AF360998|Rnf144a|108089|ring finger protein 144A	NM_001081977|Rnf144a|108089|ring finger protein 144A	NM_080563|Rnf144a|108089|ring finger protein 144A
mm9_v1_chr13_+_55206653_55206695	0.610005	AUGACAC	NM_012017|Zfp346|26919|zinc finger protein 346	AF083339|Zfp346|26919|zinc finger protein 346	BC055075|Zfp346|26919|zinc finger protein 346
mm9_v1_chr2_+_57090707_57090899	0.604867	AUGACAC	BC021359|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	NM_010274|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK167152|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	U60987|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK034353|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	AK151189|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	D50430|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial
mm9_v1_chr19_+_53218486_53218486	0.60233	AUGACAC	BC037116|Add3|27360|adducin 3 (gamma)	NM_013758|Add3|27360|adducin 3 (gamma)
mm9_v1_chr5_-_139801315_139801476	0.60154	AUGACAC	NM_172723|Adap1|231821|ArfGAP with dual PH domains 1
mm9_v1_chr17_+_21145866_21145967	0.595459	AUGACAC	AK161712|Zfp160|224585|zinc finger protein 160	AK162583|Zfp160|224585|zinc finger protein 160	AK143313|Zfp160|224585|zinc finger protein 160	NM_145483|Zfp160|224585|zinc finger protein 160	BC015291|Zfp160|224585|zinc finger protein 160
mm9_v1_chr2_+_127034130_127034141	0.594771	AUGACAC	AK039567|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	BC063261|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	NM_177214|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)
mm9_v1_chr4_+_21858472_21858503	0.591178	AUGACAC	AK144924|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	NM_175234|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK081616|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK082464|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene	AK018081|6230409E13Rik|76132|RIKEN cDNA 6230409E13 gene
mm9_v1_chr2_+_109532592_109532697	0.579695	AUGACAC	AY057913|Bdnf|12064|brain derived neurotrophic factor	EF125673|Bdnf|12064|brain derived neurotrophic factor	NM_001048141|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr2_+_71050002_71050098	0.575288	AUGACAC	NM_001198877|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198878|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_010064|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK168730|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK088015|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK135477|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992211|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992212|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AF063231|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2
mm9_v1_chr2_+_109514856_109514856	0.573768	AUGACAC	AY057908|Bdnf|12064|brain derived neurotrophic factor	EF125669|Bdnf|12064|brain derived neurotrophic factor	NM_007540|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr2_+_172073991_172073998	0.569846	AUGACAC	AK038677|Mc3r|17201|melanocortin 3 receptor	NM_008561|Mc3r|17201|melanocortin 3 receptor	BC103669|Mc3r|17201|melanocortin 3 receptor	BC104730|Mc3r|17201|melanocortin 3 receptor	BC105667|Mc3r|17201|melanocortin 3 receptor	BC105668|Mc3r|17201|melanocortin 3 receptor
mm9_v1_chr11_-_44283916_44284049	0.568139	AUGACAC	AK015910|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK172546|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK043952|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK050031|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK153998|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK147744|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	NM_024475|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1
mm9_v1_chr8_-_73416578_73416655	0.566283	AUGACAC	AF380353|Slc5a5|114479|solute carrier family 5 (sodium iodide symporter), member 5	BC137650|Slc5a5|114479|solute carrier family 5 (sodium iodide symporter), member 5	BC137651|Slc5a5|114479|solute carrier family 5 (sodium iodide symporter), member 5	AF235001|Slc5a5|114479|solute carrier family 5 (sodium iodide symporter), member 5	AK046718|Slc5a5|114479|solute carrier family 5 (sodium iodide symporter), member 5	NM_053248|Slc5a5|114479|solute carrier family 5 (sodium iodide symporter), member 5
mm9_v1_chr1_+_183081058_183081062	0.563951	AUGACAC	NM_030131|Cnih4|98417|cornichon homolog 4 (Drosophila)
mm9_v1_chr14_-_34260323_34260352	0.55449	AUGACAC	AK139498|Mapk8|26419|mitogen-activated protein kinase 8	AK032486|Mapk8|26419|mitogen-activated protein kinase 8	AK043102|Mapk8|26419|mitogen-activated protein kinase 8	AK085745|Mapk8|26419|mitogen-activated protein kinase 8	AK030767|Mapk8|26419|mitogen-activated protein kinase 8	NM_016700|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr19_-_19185685_19185685	0.531823	AUGACAC	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr5_-_138125817_138125859	0.526345	AUGACAC	BC046788|Agfg2|231801|ArfGAP with FG repeats 2	NM_178162|Agfg2|231801|ArfGAP with FG repeats 2
mm9_v1_chr15_-_31460752_31460820	0.524698	AUGACAC	AK132461|March6|223455|membrane-associated ring finger (C3HC4) 6	AK089827|March6|223455|membrane-associated ring finger (C3HC4) 6	NM_172606|March6|223455|membrane-associated ring finger (C3HC4) 6
mm9_v1_chr7_+_62090614_62090614	0.523517	AUGACAC	AY164459|Luzp2|233271|leucine zipper protein 2	NM_178705|Luzp2|233271|leucine zipper protein 2
mm9_v1_chr5_-_149211354_149211479	0.521525	AUGACAC	BC068234|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK147991|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	M26687|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK139342|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	NM_007513|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm9_v1_chr8_-_83538732_83538837	0.519242	AUGACAC	BC058784|Usp38|74841|ubiquitin specific peptidase 38	BC066786|Usp38|74841|ubiquitin specific peptidase 38	AK129464|Usp38|74841|ubiquitin specific peptidase 38	AK049287|Usp38|74841|ubiquitin specific peptidase 38	AK028904|Usp38|74841|ubiquitin specific peptidase 38	BC057122|Usp38|74841|ubiquitin specific peptidase 38	AK142200|Usp38|74841|ubiquitin specific peptidase 38	BC054404|Usp38|74841|ubiquitin specific peptidase 38	NM_027554|Usp38|74841|ubiquitin specific peptidase 38	AK054116|Usp38|74841|ubiquitin specific peptidase 38	AK139639|Usp38|74841|ubiquitin specific peptidase 38	AK052219|Usp38|74841|ubiquitin specific peptidase 38
mm9_v1_chr15_-_97561769_97561835	0.509479	AUGACAC	AK132616|Endou|19011|endonuclease, polyU-specific	NM_001168693|Endou|19011|endonuclease, polyU-specific
mm9_v1_chr17_+_70911084_70911126	0.504993	AUGACAC	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr10_-_76881008_76881043	0.497654	AUGACAC	AK138318|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AK147298|Adarb1|110532|adenosine deaminase, RNA-specific, B1	NM_001024837|Adarb1|110532|adenosine deaminase, RNA-specific, B1	NM_130895|Adarb1|110532|adenosine deaminase, RNA-specific, B1
mm9_v1_chr2_+_127095942_127096024	0.494335	AUGACAC	AK143699|Stard7|99138|START domain containing 7	NM_139308|Stard7|99138|START domain containing 7	BC017524|Stard7|99138|START domain containing 7	BC080747|Stard7|99138|START domain containing 7
mm9_v1_chr3_-_40886957_40886982	0.475767	AUGACAC	NM_027558|Pgrmc2|70804|progesterone receptor membrane component 2
mm9_v1_chr11_+_32355355_32355458	0.46892	AUGACAC	AK076953|Ubtd2|327900|ubiquitin domain containing 2	BC057026|Ubtd2|327900|ubiquitin domain containing 2	NM_173784|Ubtd2|327900|ubiquitin domain containing 2
mm9_v1_chr2_+_120834141_120834181	0.466473	AUGACAC	NM_010761|Ccndbp1|17151|cyclin D-type binding-protein 1	AK144883|Ccndbp1|17151|cyclin D-type binding-protein 1	AK160205|Ccndbp1|17151|cyclin D-type binding-protein 1	AK167345|Ccndbp1|17151|cyclin D-type binding-protein 1
mm9_v1_chr3_-_141645214_141645214	0.455828	AUGACAC	BC065143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	NM_007560|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr11_-_97011025_97011025	0.451983	AUGACAC	BC057590|Tbkbp1|73174|TBK1 binding protein 1	NM_198100|Tbkbp1|73174|TBK1 binding protein 1
mm9_v1_chr9_+_37296867_37296905	0.43531	AUGACAC	BC066002|BC024479|235184|cDNA sequence BC024479	NM_146222|BC024479|235184|cDNA sequence BC024479
mm9_v1_chr13_-_98976043_98976393	0.428302	AUGACAC	BC138030|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC075734|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC098331|Rgnef|110596|Rho-guanine nucleotide exchange factor	NM_012026|Rgnef|110596|Rho-guanine nucleotide exchange factor	U73199|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC022978|Rgnef|110596|Rho-guanine nucleotide exchange factor	AK173325|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr13_+_41701584_41701584	0.421197	AUGACAC	NM_001163572|Tmem170b|621976|transmembrane protein 170B
mm9_v1_chr1_-_179178874_179178897	0.420709	AUGACAC	AF124142|Akt3|23797|thymoma viral proto-oncogene 3	BC066861|Akt3|23797|thymoma viral proto-oncogene 3	NM_011785|Akt3|23797|thymoma viral proto-oncogene 3
mm9_v1_chr2_+_156022382_156022502	0.412506	AUGACAC	NM_172674|Phf20|228829|PHD finger protein 20	AK045309|Phf20|228829|PHD finger protein 20	AK033017|Phf20|228829|PHD finger protein 20	AK038573|Phf20|228829|PHD finger protein 20	AK142424|Phf20|228829|PHD finger protein 20	BC060121|Phf20|228829|PHD finger protein 20
mm9_v1_chr19_-_47089605_47089678	0.409948	AUGACAC	AK162385|Nt5c2|76952|5'-nucleotidase, cytosolic II	NM_001164363|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr5_-_121641282_121641449	0.394857	AUGACAC	D84372|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC057398|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC028513|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK011468|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK147354|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC059278|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159501|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159587|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_001109992|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_011202|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11
mm9_v1_chr1_-_24107142_24107222	0.394808	AUGACAC	AK149303|Fam135a|68187|family with sequence similarity 135, member A	AK165306|Fam135a|68187|family with sequence similarity 135, member A	NM_026604|Fam135a|68187|family with sequence similarity 135, member A
mm9_v1_chr2_+_71049762_71049900	0.393123	AUGACAC	NM_001198872|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198873|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198874|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198875|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198876|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK019441|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK141837|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK150173|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164322|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164437|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992208|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992209|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992210|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2
mm9_v1_chr4_+_125168074_125168079	0.386183	AUGACAC	NM_001081097|Grik3|14807|glutamate receptor, ionotropic, kainate 3	BC118004|Grik3|14807|glutamate receptor, ionotropic, kainate 3
mm9_v1_chr15_-_36937065_36937180	0.355848	AUGACAC	AK132053|Zfp706|68036|zinc finger protein 706	AK167897|Zfp706|68036|zinc finger protein 706	AK168303|Zfp706|68036|zinc finger protein 706	BC054356|Zfp706|68036|zinc finger protein 706	AK167791|Zfp706|68036|zinc finger protein 706	BC052459|Zfp706|68036|zinc finger protein 706	NM_026521|Zfp706|68036|zinc finger protein 706
mm9_v1_chr19_-_47044056_47044056	0.353365	AUGACAC	NM_001164365|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr13_-_64349830_64349845	0.3504	AUGACAC	AK041155|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001122989|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr2_-_91550688_91550738	0.34848	AUGACAC	BC023673|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK163962|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC023712|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC033419|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK149672|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK171440|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC016669|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	NM_145528|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK154470|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK171206|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr19_-_42276620_42276741	0.345061	AUGACAC	BC032921|Sfrp5|54612|secreted frizzled-related sequence protein 5	AF117759|Sfrp5|54612|secreted frizzled-related sequence protein 5	NM_018780|Sfrp5|54612|secreted frizzled-related sequence protein 5
mm9_v1_chr18_+_35989376_35989483	0.343194	AUGACAC	AK005364|Cxxc5|67393|CXXC finger 5	BC089314|Cxxc5|67393|CXXC finger 5	NM_133687|Cxxc5|67393|CXXC finger 5
mm9_v1_chrX_-_17149313_17149460	0.338004	AUGACAC	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr11_-_90499370_90499421	0.312959	AUGACAC	BC032881|Stxbp4|20913|syntaxin binding protein 4	AK012293|Stxbp4|20913|syntaxin binding protein 4	AK032998|Stxbp4|20913|syntaxin binding protein 4	AK049001|Stxbp4|20913|syntaxin binding protein 4	NM_011505|Stxbp4|20913|syntaxin binding protein 4
mm9_v1_chr6_-_57775039_57775171	0.306218	AUGACAC	BC024884|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK170152|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK170832|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK030975|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	BC024822|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	NM_146168|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK031812|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK158041|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1	AK165256|Vopp1|232023|vesicular, overexpressed in cancer, prosurvival protein 1
mm9_v1_chr7_-_149843316_149843387	0.30436	AUGACAC	M14951|Igf2|16002|insulin-like growth factor 2	BC058615|Igf2|16002|insulin-like growth factor 2	BC053489|Igf2|16002|insulin-like growth factor 2	NM_001122737|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr2_+_48669628_48669670	0.296831	AUGACAC	NM_007396|Acvr2a|11480|activin receptor IIA	AK081022|Acvr2a|11480|activin receptor IIA
mm9_v1_chr5_-_38108301_38108391	0.294811	AUGACAC	BC052404|Stk32b|64293|serine/threonine kinase 32B	BC058412|Stk32b|64293|serine/threonine kinase 32B	BC056396|Stk32b|64293|serine/threonine kinase 32B	AK082468|Stk32b|64293|serine/threonine kinase 32B	NM_022416|Stk32b|64293|serine/threonine kinase 32B
mm9_v1_chrX_+_155970593_155970627	0.284802	AUGACAC	AK044001|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene	NM_001033472|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene
mm9_v1_chr1_+_138027943_138028013	0.278347	AUGACAC	NM_001039472|Kif21b|16565|kinesin family member 21B
mm9_v1_chr8_-_3854285_3854307	0.269778	AUGACAC	AF373412|Cd209e|170780|CD209e antigen	BC107188|Cd209e|170780|CD209e antigen	BC107189|Cd209e|170780|CD209e antigen	NM_130905|Cd209e|170780|CD209e antigen	AK040917|Cd209e|170780|CD209e antigen
mm9_v1_chr15_-_66332402_66332471	0.261693	AUGACAC	AF092208|Lrrc6|54562|leucine rich repeat containing 6 (testis)	BC046277|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK077124|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK016236|Lrrc6|54562|leucine rich repeat containing 6 (testis)	NM_019457|Lrrc6|54562|leucine rich repeat containing 6 (testis)
mm9_v1_chr3_-_5576086_5576166	0.26098	AUGACAC	BC012404|Pxmp3|19302|peroxisomal membrane protein 3	AK151121|Pxmp3|19302|peroxisomal membrane protein 3	AK152331|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163304|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163305|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163306|Pxmp3|19302|peroxisomal membrane protein 3	NM_008994|Pxmp3|19302|peroxisomal membrane protein 3	AK146530|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163301|Pxmp3|19302|peroxisomal membrane protein 3
mm9_v1_chr8_+_3393005_3393067	0.258058	AUGACAC	AK041423|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	NM_133962|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	BC060639|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18	AK147923|Arhgef18|102098|rho/rac guanine nucleotide exchange factor (GEF) 18
mm9_v1_chr16_+_13109828_13109828	0.253078	AUGACAC	AF189285|Ercc4|50505|excision repair cross-complementing rodent repair deficiency, complementation group 4	NM_015769|Ercc4|50505|excision repair cross-complementing rodent repair deficiency, complementation group 4
mm9_v1_chr5_-_93473976_93474047	0.249068	AUGACAC	AK033423|Ankrd56|78088|ankyrin repeat domain 56	AK137429|Ankrd56|78088|ankyrin repeat domain 56	NM_175270|Ankrd56|78088|ankyrin repeat domain 56
mm9_v1_chr2_+_155062268_155062350	0.240475	AUGACAC	NM_025947|Dynlrb1|67068|dynein light chain roadblock-type 1	AK166685|Dynlrb1|67068|dynein light chain roadblock-type 1	BC099423|Dynlrb1|67068|dynein light chain roadblock-type 1	AK008595|Dynlrb1|67068|dynein light chain roadblock-type 1	BC125610|Dynlrb1|67068|dynein light chain roadblock-type 1	BC125648|Dynlrb1|67068|dynein light chain roadblock-type 1	AK002359|Dynlrb1|67068|dynein light chain roadblock-type 1	AK003435|Dynlrb1|67068|dynein light chain roadblock-type 1
mm9_v1_chr5_+_64203602_64203733	0.237558	AUGACAC	AK050792|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	AK002869|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	NM_029554|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene
mm9_v1_chr7_+_13512764_13512769	0.234349	AUGACAC	AK028523|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene	NM_029809|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene	AK009344|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene	BC141220|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene
mm9_v1_chr14_-_57430529_57430552	0.233689	AUGACAC	AK036513|Zmym5|219105|zinc finger, MYM-type 5	AK155333|Zmym5|219105|zinc finger, MYM-type 5	NM_144842|Zmym5|219105|zinc finger, MYM-type 5
mm9_v1_chr9_+_110379481_110379600	0.233325	AUGACAC	AK029776|Kif9|16578|kinesin family member 9	AK087008|Kif9|16578|kinesin family member 9	NM_001163569|Kif9|16578|kinesin family member 9	AJ132889|Kif9|16578|kinesin family member 9	BC115765|Kif9|16578|kinesin family member 9	AK029506|Kif9|16578|kinesin family member 9
mm9_v1_chr10_+_92916131_92916143	0.228998	AUGACAC	AK005161|Lta4h|16993|leukotriene A4 hydrolase	NM_008517|Lta4h|16993|leukotriene A4 hydrolase
mm9_v1_chr1_+_43009716_43009807	0.222201	AUGACAC	AK054151|Gpr45|93690|G protein-coupled receptor 45	NM_053107|Gpr45|93690|G protein-coupled receptor 45	AK035091|Gpr45|93690|G protein-coupled receptor 45	AK039769|Gpr45|93690|G protein-coupled receptor 45
mm9_v1_chr7_-_149844708_149844708	0.222149	AUGACAC	NM_010514|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr17_+_24488985_24489087	0.217216	AUGACAC	AK166355|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	NM_001039581|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	NM_013855|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	BC047356|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK089794|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK168428|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK165458|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK089316|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AK154698|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	AY083616|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr1_+_88600370_88600431	0.214336	AUGACAC	AK050762|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2	NM_001172157|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2	NM_153530|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2	AK079867|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2	AK031180|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2	AK029652|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2	AK040613|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2	BC036177|Dis3l2|208718|DIS3 mitotic control homolog (S. cerevisiae)-like 2
mm9_v1_chr3_-_41546402_41546435	0.213407	AUGACAC	BC043136|Sclt1|67161|sodium channel and clathrin linker 1	BC060271|Sclt1|67161|sodium channel and clathrin linker 1	AK083894|Sclt1|67161|sodium channel and clathrin linker 1	AK016469|Sclt1|67161|sodium channel and clathrin linker 1	NM_001081411|Sclt1|67161|sodium channel and clathrin linker 1
mm9_v1_chr15_-_74539748_74539751	0.202718	AUGACAC	AK168885|Jrk|16469|jerky	NM_008415|Jrk|16469|jerky
mm9_v1_chr19_-_19075535_19075606	0.196691	AUGACAC	DQ779924|Rorb|225998|RAR-related orphan receptor beta	BC024768|Rorb|225998|RAR-related orphan receptor beta	AK044421|Rorb|225998|RAR-related orphan receptor beta	BC024842|Rorb|225998|RAR-related orphan receptor beta	NM_146095|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr15_-_89145631_89145745	0.195264	AUGACAC	BC157935|Sbf1|77980|SET binding factor 1	BC158013|Sbf1|77980|SET binding factor 1	BC172094|Sbf1|77980|SET binding factor 1	AK129485|Sbf1|77980|SET binding factor 1	AK147332|Sbf1|77980|SET binding factor 1	NM_001081030|Sbf1|77980|SET binding factor 1	NM_001170561|Sbf1|77980|SET binding factor 1
mm9_v1_chr14_-_96918064_96918252	0.190108	AUGACAC	AK031932|Klhl1|93688|kelch-like 1 (Drosophila)	AF252281|Klhl1|93688|kelch-like 1 (Drosophila)	BC094584|Klhl1|93688|kelch-like 1 (Drosophila)	NM_053105|Klhl1|93688|kelch-like 1 (Drosophila)
mm9_v1_chr17_-_31649431_31649431	0.187621	AUGACAC	NM_021322|Wdr4|57773|WD repeat domain 4
mm9_v1_chr9_-_36954858_36954932	0.186597	AUGACAC	NM_148950|Pknox2|208076|Pbx/knotted 1 homeobox 2
mm9_v1_chr10_+_36226612_36226726	0.182778	AUGACAC	NM_001081208|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC147490|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC147493|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC150973|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	BC158004|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	AK086098|Hs3st5|319415|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
mm9_v1_chr2_+_57090045_57090088	0.177947	AUGACAC	AK144716|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	NM_001145820|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial
mm9_v1_chr9_-_36954842_36954852	0.177175	AUGACAC	AK144270|Pknox2|208076|Pbx/knotted 1 homeobox 2	AK084178|Pknox2|208076|Pbx/knotted 1 homeobox 2	AK082952|Pknox2|208076|Pbx/knotted 1 homeobox 2	NM_001029838|Pknox2|208076|Pbx/knotted 1 homeobox 2
mm9_v1_chr8_+_90723069_90723153	0.177091	AUGACAC	AK077553|Papd5|214627|PAP associated domain containing 5	NM_001164497|Papd5|214627|PAP associated domain containing 5	NM_001164498|Papd5|214627|PAP associated domain containing 5	NM_001164499|Papd5|214627|PAP associated domain containing 5	BC059053|Papd5|214627|PAP associated domain containing 5	BC144796|Papd5|214627|PAP associated domain containing 5	BC144797|Papd5|214627|PAP associated domain containing 5	BC145737|Papd5|214627|PAP associated domain containing 5
mm9_v1_chr17_-_57333491_57333608	0.172323	AUGACAC	AF123385|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AF227533|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125477|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125479|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AB029155|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	NM_019418|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14
mm9_v1_chr11_-_107331865_107332065	0.161424	AUGACAC	BC082333|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	BC108351|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AB077281|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK153625|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171918|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK172137|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	NM_145823|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171340|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr6_+_29718424_29718454	0.158331	AUGACAC	AK165725|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2	NM_001171000|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2	NM_021414|Ahcyl2|74340|S-adenosylhomocysteine hydrolase-like 2
mm9_v1_chr7_+_126697853_126697853	0.153438	AUGACAC	AK140827|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_001177977|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2
mm9_v1_chr1_+_165978346_165978413	0.141632	AUGACAC	AK153623|Sele|20339|selectin, endothelial cell	M87862|Sele|20339|selectin, endothelial cell	NM_011345|Sele|20339|selectin, endothelial cell	BC119083|Sele|20339|selectin, endothelial cell	BC120795|Sele|20339|selectin, endothelial cell
mm9_v1_chr5_+_130230890_130230961	0.140211	AUGACAC	NM_008095|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr6_+_92041408_92041534	0.137317	AUGACAC	NM_011630|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2	AK157305|Nr2c2|22026|nuclear receptor subfamily 2, group C, member 2
mm9_v1_chr18_-_10029925_10030160	0.13598	AUGACAC	AB034633|Usp14|59025|ubiquitin specific peptidase 14	BC050197|Usp14|59025|ubiquitin specific peptidase 14	AK045909|Usp14|59025|ubiquitin specific peptidase 14	BC005571|Usp14|59025|ubiquitin specific peptidase 14	AK029977|Usp14|59025|ubiquitin specific peptidase 14	AK160215|Usp14|59025|ubiquitin specific peptidase 14	AK011322|Usp14|59025|ubiquitin specific peptidase 14	AK172477|Usp14|59025|ubiquitin specific peptidase 14	AK170933|Usp14|59025|ubiquitin specific peptidase 14	NM_001038589|Usp14|59025|ubiquitin specific peptidase 14	NM_021522|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr9_+_104955563_104955826	0.135178	AUGACAC	AK008592|Mrpl3|94062|mitochondrial ribosomal protein L3	AK145687|Mrpl3|94062|mitochondrial ribosomal protein L3	AK169272|Mrpl3|94062|mitochondrial ribosomal protein L3	NM_053159|Mrpl3|94062|mitochondrial ribosomal protein L3	AK077857|Mrpl3|94062|mitochondrial ribosomal protein L3	AK002509|Mrpl3|94062|mitochondrial ribosomal protein L3	BC011128|Mrpl3|94062|mitochondrial ribosomal protein L3	BC016586|Mrpl3|94062|mitochondrial ribosomal protein L3	BC034877|Mrpl3|94062|mitochondrial ribosomal protein L3	AB049633|Mrpl3|94062|mitochondrial ribosomal protein L3	AK217246|Mrpl3|94062|mitochondrial ribosomal protein L3
mm9_v1_chr3_-_5576206_5576238	0.134354	AUGACAC	AF031128|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163302|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163303|Pxmp3|19302|peroxisomal membrane protein 3
mm9_v1_chr15_-_97551580_97551592	0.131721	AUGACAC	M95545|Endou|19011|endonuclease, polyU-specific	NM_008902|Endou|19011|endonuclease, polyU-specific	AK169457|Endou|19011|endonuclease, polyU-specific
mm9_v1_chr1_-_135557461_135557461	0.128912	AUGACAC	AK144981|Zbed6|667118|zinc finger, BED domain containing 6	NM_001166552|Zbed6|667118|zinc finger, BED domain containing 6
mm9_v1_chr17_-_33855557_33855658	0.127843	AUGACAC	BC002144|March2|224703|membrane-associated ring finger (C3HC4) 2	AK053434|March2|224703|membrane-associated ring finger (C3HC4) 2	AK079234|March2|224703|membrane-associated ring finger (C3HC4) 2	AK081495|March2|224703|membrane-associated ring finger (C3HC4) 2	AK036614|March2|224703|membrane-associated ring finger (C3HC4) 2	AK039778|March2|224703|membrane-associated ring finger (C3HC4) 2	AK040163|March2|224703|membrane-associated ring finger (C3HC4) 2	NM_145486|March2|224703|membrane-associated ring finger (C3HC4) 2
mm9_v1_chr5_-_35917699_35917718	0.127256	AUGACAC	AK019101|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	BC152332|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	AK046957|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	AK132402|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	NM_030208|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene
mm9_v1_chr5_-_65884033_65884124	0.116989	AUGACAC	AK003345|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene	BC009097|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene	AK164394|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene	NM_133697|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene	AK018994|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene	AK088833|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene
mm9_v1_chr12_-_92828896_92828926	0.114919	AUGACAC	BC117829|Gtf2a1|83602|general transcription factor II A, 1	BC117830|Gtf2a1|83602|general transcription factor II A, 1	AK048711|Gtf2a1|83602|general transcription factor II A, 1	NM_175335|Gtf2a1|83602|general transcription factor II A, 1
mm9_v1_chr13_+_54167169_54167276	0.113475	AUGACAC	AK012650|Sfxn1|14057|sideroflexin 1	NM_027324|Sfxn1|14057|sideroflexin 1	AF325260|Sfxn1|14057|sideroflexin 1	BC005743|Sfxn1|14057|sideroflexin 1	AK151110|Sfxn1|14057|sideroflexin 1
mm9_v1_chr8_-_113555584_113555650	0.106476	AUGACAC	AK033235|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_001190786|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm9_v1_chr18_-_55149819_55149833	0.100545	AUGACAC	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr11_-_66339627_66339627	0.099942	AUGACAC	AK147504|Shisa6|380702|shisa homolog 6 (Xenopus laevis)	NM_001034874|Shisa6|380702|shisa homolog 6 (Xenopus laevis)
mm9_v1_chr2_+_167757825_167757866	0.0970457	AUGACAC	AK157431|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	NM_011201|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK165567|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr5_+_107860567_107860567	0.0969356	AUGACAC	AK014940|Lpcat2b|70902|lysophosphatidylcholine acyltransferase 2B	AK029548|Lpcat2b|70902|lysophosphatidylcholine acyltransferase 2B	NM_027599|Lpcat2b|70902|lysophosphatidylcholine acyltransferase 2B
mm9_v1_chr8_+_107115349_107115367	0.0920865	AUGACAC	NM_001024606|Pdp2|382051|pyruvate dehyrogenase phosphatase catalytic subunit 2
mm9_v1_chr8_-_87324043_87324239	0.0899234	AUGACAC	Y07688|Nfix|18032|nuclear factor I/X	NM_001081982|Nfix|18032|nuclear factor I/X	NM_010906|Nfix|18032|nuclear factor I/X
mm9_v1_chr4_+_132567420_132567463	0.0825984	AUGACAC	BC042621|Ahdc1|230793|AT hook, DNA binding motif, containing 1	NM_146155|Ahdc1|230793|AT hook, DNA binding motif, containing 1
mm9_v1_chr10_-_116585527_116585608	0.0814178	AUGACAC	BC043109|Frs2|327826|fibroblast growth factor receptor substrate 2	NM_177798|Frs2|327826|fibroblast growth factor receptor substrate 2	AK028813|Frs2|327826|fibroblast growth factor receptor substrate 2	AK163442|Frs2|327826|fibroblast growth factor receptor substrate 2	BC055334|Frs2|327826|fibroblast growth factor receptor substrate 2	AK138144|Frs2|327826|fibroblast growth factor receptor substrate 2
mm9_v1_chr2_-_168427037_168427156	0.078799	AUGACAC	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr19_-_44144175_44144240	0.0765469	AUGACAC	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr13_+_40955500_40955723	0.0710765	AUGACAC	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr7_-_24993103_24993167	0.0616072	AUGACAC	BC005456|Zfp111|56707|zinc finger protein 111	AK135436|Zfp111|56707|zinc finger protein 111	NM_019940|Zfp111|56707|zinc finger protein 111
mm9_v1_chr12_-_104932866_104932925	0.0529836	AUGACAC	BC119526|Serpina1f|68348|serine (or cysteine) peptidase inhibitor, clade A, member 1F	AK165409|Serpina1f|68348|serine (or cysteine) peptidase inhibitor, clade A, member 1F	NM_001164742|Serpina1f|68348|serine (or cysteine) peptidase inhibitor, clade A, member 1F	AK002574|Serpina1f|68348|serine (or cysteine) peptidase inhibitor, clade A, member 1F
mm9_v1_chr1_+_158488917_158488917	0.0508104	AUGACAC	NM_001136104|Abl2|11352|v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)	NM_009595|Abl2|11352|v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)
mm9_v1_chr9_-_59598416_59598455	0.046798	AUGACAC	BC037443|Senp8|71599|SUMO/sentrin specific peptidase 8	AK018606|Senp8|71599|SUMO/sentrin specific peptidase 8	AK029856|Senp8|71599|SUMO/sentrin specific peptidase 8	AK049120|Senp8|71599|SUMO/sentrin specific peptidase 8	AK136214|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172068|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172069|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172070|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172071|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_027838|Senp8|71599|SUMO/sentrin specific peptidase 8
mm9_v1_chr3_+_5218545_5218658	0.0424544	AUGACAC	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr7_+_134119857_134119912	0.04161	AUGACAC	AK132286|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	AK089109|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	NM_026638|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	AK003041|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	NM_138754|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	BC021473|Cdipt|52858|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm9_v1_chr12_-_104933660_104933738	0.0294933	AUGACAC	AB233454|Serpina1f|68348|serine (or cysteine) peptidase inhibitor, clade A, member 1F	NM_026687|Serpina1f|68348|serine (or cysteine) peptidase inhibitor, clade A, member 1F
mm9_v1_chr8_-_113551636_113551700	0.0194914	AUGACAC	AK147499|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	AK013362|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_001190800|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_172284|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm9_v1_chr7_-_81158546_81158567	0.0185812	AUGACAC	X83562|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	BC096546|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	NM_009181|St8sia2|20450|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
mm9_v1_chr7_+_135056028_135056042	0.016722	AUGACAC	AK029350|Myst1|67773|MYST histone acetyltransferase 1	AK146710|Myst1|67773|MYST histone acetyltransferase 1	AK003264|Myst1|67773|MYST histone acetyltransferase 1	AK132000|Myst1|67773|MYST histone acetyltransferase 1	NM_026370|Myst1|67773|MYST histone acetyltransferase 1	AK018002|Myst1|67773|MYST histone acetyltransferase 1	AK008418|Myst1|67773|MYST histone acetyltransferase 1	BC036284|Myst1|67773|MYST histone acetyltransferase 1
mm9_v1_chr4_-_3946665_3946809	0.0100094	AUGACAC	BC104134|Sdr16c5|242285|short chain dehydrogenase/reductase family 16C, member 5	BC104135|Sdr16c5|242285|short chain dehydrogenase/reductase family 16C, member 5	AY277588|Sdr16c5|242285|short chain dehydrogenase/reductase family 16C, member 5	NM_181989|Sdr16c5|242285|short chain dehydrogenase/reductase family 16C, member 5
mm9_v1_chr14_+_48740495_48740543	0.00423177	AUGACAC	AK030564|Peli2|93834|pellino 2	AK045515|Peli2|93834|pellino 2	NM_033602|Peli2|93834|pellino 2
