mm9_v1_chr19_+_12873115_12873132	40.643	BPTF.p2	BC026563|Lpxn|107321|leupaxin
mm9_v1_chr5_+_145888588_145888809	39.4887	BPTF.p2	AK192837|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr11_+_83037063_83037095	38.8076	BPTF.p2	AK028715|AI662270|100043636|expressed sequence AI662270	AK168001|AI662270|100043636|expressed sequence AI662270
mm9_v1_chr8_+_90812964_90813045	34.6037	BPTF.p2	NM_001037723|Adcy7|11513|adenylate cyclase 7	AK154262|Adcy7|11513|adenylate cyclase 7	AK138911|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr2_-_60589059_60589160	31.9798	BPTF.p2	AK011205|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr19_+_12873063_12873098	31.8631	BPTF.p2	AK039922|Lpxn|107321|leupaxin	AB071194|Lpxn|107321|leupaxin	NM_134152|Lpxn|107321|leupaxin
mm9_v1_chr5_-_86539474_86539529	30.4458	BPTF.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr6_-_122806122_122806175	30.3426	BPTF.p2	AK154229|C3ar1|12267|complement component 3a receptor 1	NM_009779|C3ar1|12267|complement component 3a receptor 1	AK054017|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chr1_+_175560938_175561047	29.7	BPTF.p2	NM_175026|Pyhin1|236312|pyrin and HIN domain family, member 1	AK080371|Pyhin1|236312|pyrin and HIN domain family, member 1	BC096384|Pyhin1|236312|pyrin and HIN domain family, member 1
mm9_v1_chr4_-_133650937_133651017	29.6548	BPTF.p2	BC027495|Cd52|23833|CD52 antigen	AK088161|Cd52|23833|CD52 antigen	X76696|Cd52|23833|CD52 antigen	M55561|Cd52|23833|CD52 antigen	AK155728|Cd52|23833|CD52 antigen	NM_013706|Cd52|23833|CD52 antigen
mm9_v1_chr14_+_51748742_51748810	28.344	BPTF.p2	NM_030098|Rnase6|78416|ribonuclease, RNase A family, 6	AY545655|Rnase6|78416|ribonuclease, RNase A family, 6	BC094892|Rnase6|78416|ribonuclease, RNase A family, 6	AK020595|Rnase6|78416|ribonuclease, RNase A family, 6	BC132632|Rnase6|78416|ribonuclease, RNase A family, 6	BC132634|Rnase6|78416|ribonuclease, RNase A family, 6
mm9_v1_chr11_+_87607531_87607556	28.0638	BPTF.p2	AY500847|Mpo|17523|myeloperoxidase
mm9_v1_chr12_-_27129497_27129520	26.7101	BPTF.p2	AK151624|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK203254|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr6_-_122806020_122806039	26.6791	BPTF.p2	U77460|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chr6_-_122806042_122806103	26.3542	BPTF.p2	BC003728|C3ar1|12267|complement component 3a receptor 1	AK154134|C3ar1|12267|complement component 3a receptor 1	AK154609|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chr5_-_121357467_121357543	26.3121	BPTF.p2	BC057878|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	AK149613|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	BC013715|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	M33863|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	X04958|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	NM_145211|Oas1a|246730|2'-5' oligoadenylate synthetase 1A
mm9_v1_chr1_+_165992203_165992294	26.1454	BPTF.p2	AK170753|Sell|20343|selectin, lymphocyte	NM_001164059|Sell|20343|selectin, lymphocyte	NM_011346|Sell|20343|selectin, lymphocyte	AK161754|Sell|20343|selectin, lymphocyte	AK157273|Sell|20343|selectin, lymphocyte	AK172116|Sell|20343|selectin, lymphocyte	BC052681|Sell|20343|selectin, lymphocyte	M25324|Sell|20343|selectin, lymphocyte	X14772|Sell|20343|selectin, lymphocyte	M36005|Sell|20343|selectin, lymphocyte	M36058|Sell|20343|selectin, lymphocyte	AK137509|Sell|20343|selectin, lymphocyte
mm9_v1_chr10_+_79457716_79457753	25.9754	BPTF.p2	AK209768|Cnn2|12798|calponin 2	AK210808|Cnn2|12798|calponin 2	AK208961|Cnn2|12798|calponin 2	AK209669|Cnn2|12798|calponin 2	AK218447|Cnn2|12798|calponin 2	AK219047|Cnn2|12798|calponin 2
mm9_v1_chr1_-_175805812_175805992	24.6949	BPTF.p2	AK087931|Mndal|100040462|myeloid nuclear differentiation antigen like	FJ594740|Mndal|100040462|myeloid nuclear differentiation antigen like
mm9_v1_chr1_-_140071818_140071883	23.7542	BPTF.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr1_+_40497472_40497552	23.7279	BPTF.p2	NM_001025602|Il1rl1|17082|interleukin 1 receptor-like 1	D13695|Il1rl1|17082|interleukin 1 receptor-like 1
mm9_v1_chr7_+_149646740_149646803	22.1488	BPTF.p2	BC044736|Lsp1|16985|lymphocyte specific 1	AK003081|Lsp1|16985|lymphocyte specific 1	M89956|Lsp1|16985|lymphocyte specific 1	NM_001136071|Lsp1|16985|lymphocyte specific 1	S74179|Lsp1|16985|lymphocyte specific 1
mm9_v1_chr7_+_149646716_149646734	21.0576	BPTF.p2	D49691|Lsp1|16985|lymphocyte specific 1
mm9_v1_chr6_+_72494474_72494530	20.6137	BPTF.p2	X54511|Capg|12332|capping protein (actin filament), gelsolin-like
mm9_v1_chr11_+_87569075_87569079	20.3543	BPTF.p2	AK020764|A430104N18Rik|78591|RIKEN cDNA A430104N18 gene
mm9_v1_chrX_-_9014351_9014429	20.2265	BPTF.p2	AK042140|Cybb|13058|cytochrome b-245, beta polypeptide	AK169930|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr2_-_180976728_180976769	19.4503	BPTF.p2	AK157942|BC006779|229003|cDNA sequence BC006779	AK168622|BC006779|229003|cDNA sequence BC006779	NM_183162|BC006779|229003|cDNA sequence BC006779
mm9_v1_chr6_+_120413200_120413305	18.1208	BPTF.p2	NM_008359|Il17ra|16172|interleukin 17 receptor A	AK036587|Il17ra|16172|interleukin 17 receptor A	AK080226|Il17ra|16172|interleukin 17 receptor A
mm9_v1_chr2_-_60590923_60591029	17.6192	BPTF.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr18_-_35900005_35900208	17.4667	BPTF.p2	DQ910493|Tmem173|72512|transmembrane protein 173	AK153868|Tmem173|72512|transmembrane protein 173	AK146284|Tmem173|72512|transmembrane protein 173	AX775911|Tmem173|72512|transmembrane protein 173	AK077788|Tmem173|72512|transmembrane protein 173	AK157370|Tmem173|72512|transmembrane protein 173	AK158458|Tmem173|72512|transmembrane protein 173	BC046640|Tmem173|72512|transmembrane protein 173	AK171612|Tmem173|72512|transmembrane protein 173	AK012006|Tmem173|72512|transmembrane protein 173	AK171065|Tmem173|72512|transmembrane protein 173	AK171203|Tmem173|72512|transmembrane protein 173	AK089405|Tmem173|72512|transmembrane protein 173	AK170724|Tmem173|72512|transmembrane protein 173	NM_028261|Tmem173|72512|transmembrane protein 173
mm9_v1_chr1_-_158404299_158404465	17.0687	BPTF.p2	AK213760|Soat1|20652|sterol O-acyltransferase 1	AK054149|Soat1|20652|sterol O-acyltransferase 1	AK142486|Soat1|20652|sterol O-acyltransferase 1	DQ903181|Soat1|20652|sterol O-acyltransferase 1	S81092|Soat1|20652|sterol O-acyltransferase 1	AK159393|Soat1|20652|sterol O-acyltransferase 1	AK159529|Soat1|20652|sterol O-acyltransferase 1	AK160017|Soat1|20652|sterol O-acyltransferase 1	NM_009230|Soat1|20652|sterol O-acyltransferase 1
mm9_v1_chr16_+_36935029_36935139	16.7087	BPTF.p2	NM_008225|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	AK040049|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	AK088723|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	BC007469|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	X84797|Hcls1|15163|hematopoietic cell specific Lyn substrate 1	D42120|Hcls1|15163|hematopoietic cell specific Lyn substrate 1
mm9_v1_chrX_-_20508584_20508688	16.2792	BPTF.p2	AK152782|Cfp|18636|complement factor properdin	AK159609|Cfp|18636|complement factor properdin	AK159853|Cfp|18636|complement factor properdin	AK150212|Cfp|18636|complement factor properdin	AK171374|Cfp|18636|complement factor properdin	BC132369|Cfp|18636|complement factor properdin	BC138306|Cfp|18636|complement factor properdin	AK154306|Cfp|18636|complement factor properdin	AK159291|Cfp|18636|complement factor properdin	NM_008823|Cfp|18636|complement factor properdin
mm9_v1_chr5_-_123183537_123183571	16.1328	BPTF.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr17_+_34341467_34341526	15.5733	BPTF.p2	AK145234|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151657|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK161091|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	BC051257|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK020022|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK079667|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151376|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151483|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK153287|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	BC005578|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr9_+_124016886_124016921	15.3039	BPTF.p2	AK154590|Ccr2|12772|chemokine (C-C motif) receptor 2	NM_009915|Ccr2|12772|chemokine (C-C motif) receptor 2	U56819|Ccr2|12772|chemokine (C-C motif) receptor 2
mm9_v1_chr3_-_86803173_86803261	15.2233	BPTF.p2	FJ594117|Cd1d1|12479|CD1d1 antigen	AK002582|Cd1d1|12479|CD1d1 antigen	BC055902|Cd1d1|12479|CD1d1 antigen	M63695|Cd1d1|12479|CD1d1 antigen	NM_007639|Cd1d1|12479|CD1d1 antigen
mm9_v1_chr7_+_16633755_16633793	15.156	BPTF.p2	AK008102|2010004M13Rik|76511|RIKEN cDNA 2010004M13 gene
mm9_v1_chr14_-_122364309_122364416	15.0006	BPTF.p2	BC052868|Gpr183|321019|G protein-coupled receptor 183	AK141593|Gpr183|321019|G protein-coupled receptor 183	AK153216|Gpr183|321019|G protein-coupled receptor 183	AK087951|Gpr183|321019|G protein-coupled receptor 183	AK156005|Gpr183|321019|G protein-coupled receptor 183	AK156289|Gpr183|321019|G protein-coupled receptor 183	NM_183031|Gpr183|321019|G protein-coupled receptor 183	AK138693|Gpr183|321019|G protein-coupled receptor 183
mm9_v1_chr6_+_72494378_72494452	14.3475	BPTF.p2	AK165153|Capg|12332|capping protein (actin filament), gelsolin-like	AK159577|Capg|12332|capping protein (actin filament), gelsolin-like	AK159736|Capg|12332|capping protein (actin filament), gelsolin-like	NM_007599|Capg|12332|capping protein (actin filament), gelsolin-like
mm9_v1_chr15_+_78757171_78757220	14.2696	BPTF.p2	BC002063|Lgals1|16852|lectin, galactose binding, soluble 1	X51903|Lgals1|16852|lectin, galactose binding, soluble 1	X15986|Lgals1|16852|lectin, galactose binding, soluble 1	X53067|Lgals1|16852|lectin, galactose binding, soluble 1	BC099479|Lgals1|16852|lectin, galactose binding, soluble 1	M57470|Lgals1|16852|lectin, galactose binding, soluble 1	M33214|Lgals1|16852|lectin, galactose binding, soluble 1
mm9_v1_chr17_+_34341417_34341460	14.1872	BPTF.p2	NM_011530|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK159200|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr12_+_34114475_34114519	13.6249	BPTF.p2	AK010829|Twistnb|28071|TWIST neighbor	NM_172253|Twistnb|28071|TWIST neighbor	AK016638|Twistnb|28071|TWIST neighbor	AK017016|Twistnb|28071|TWIST neighbor	AK153090|Twistnb|28071|TWIST neighbor	AK160682|Twistnb|28071|TWIST neighbor	BC139162|Twistnb|28071|TWIST neighbor	BC139163|Twistnb|28071|TWIST neighbor	AK017810|Twistnb|28071|TWIST neighbor	AK008677|Twistnb|28071|TWIST neighbor	BC082580|Twistnb|28071|TWIST neighbor
mm9_v1_chr6_-_123239765_123239846	13.3749	BPTF.p2	CT010223|Clec4e|56619|C-type lectin domain family 4, member e	AK170698|Clec4e|56619|C-type lectin domain family 4, member e	BC003218|Clec4e|56619|C-type lectin domain family 4, member e
mm9_v1_chr7_+_111392968_111392986	13.2913	BPTF.p2	NM_030684|Trim34a|94094|tripartite motif-containing 34A	AK089187|Trim34a|94094|tripartite motif-containing 34A
mm9_v1_chr11_-_69709003_69709061	13.2206	BPTF.p2	AK154210|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	AK169793|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	BC027569|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	AK138736|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	BC031462|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	NM_153788|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	AK133473|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	AK154449|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1	AK155001|Acap1|216859|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
mm9_v1_chr5_-_92776160_92776261	13.1059	BPTF.p2	AK152838|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr14_-_25306261_25306271	13.0148	BPTF.p2	NM_001081247|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK170475|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chr10_-_88875526_88875657	12.9061	BPTF.p2	AK171905|Gas2l3|237436|growth arrest-specific 2 like 3	AK136819|Gas2l3|237436|growth arrest-specific 2 like 3
mm9_v1_chr3_+_89904315_89904415	12.6805	BPTF.p2	
mm9_v1_chr12_-_66273564_66273601	12.6235	BPTF.p2	AK035117|Mis18bp1|217653|MIS18 binding protein 1	BC052175|Mis18bp1|217653|MIS18 binding protein 1	NM_172578|Mis18bp1|217653|MIS18 binding protein 1	AK036395|Mis18bp1|217653|MIS18 binding protein 1	AK053496|Mis18bp1|217653|MIS18 binding protein 1	BC042728|Mis18bp1|217653|MIS18 binding protein 1	AK162657|Mis18bp1|217653|MIS18 binding protein 1
mm9_v1_chr5_+_86500770_86500862	12.5851	BPTF.p2	AK162655|Stap1|56792|signal transducing adaptor family member 1	AK153661|Stap1|56792|signal transducing adaptor family member 1	BC057898|Stap1|56792|signal transducing adaptor family member 1	AK042475|Stap1|56792|signal transducing adaptor family member 1	BC145550|Stap1|56792|signal transducing adaptor family member 1	BC145828|Stap1|56792|signal transducing adaptor family member 1	BC145830|Stap1|56792|signal transducing adaptor family member 1	AK041474|Stap1|56792|signal transducing adaptor family member 1	NM_019992|Stap1|56792|signal transducing adaptor family member 1	AB036058|Stap1|56792|signal transducing adaptor family member 1
mm9_v1_chr9_-_78290953_78291043	12.5521	BPTF.p2	BC052196|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	NM_173386|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK078662|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK054330|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK145268|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK154165|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145651|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145653|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK030292|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene
mm9_v1_chr12_+_77471173_77471252	12.3508	BPTF.p2	AK035036|Zbtb1|268564|zinc finger and BTB domain containing 1	AK049397|Zbtb1|268564|zinc finger and BTB domain containing 1	AY611626|Zbtb1|268564|zinc finger and BTB domain containing 1	NM_178744|Zbtb1|268564|zinc finger and BTB domain containing 1
mm9_v1_chr1_+_58859345_58859473	12.2259	BPTF.p2	NM_001080126|Casp8|12370|caspase 8	AK153340|Casp8|12370|caspase 8
mm9_v1_chr6_+_116123984_116124113	12.1958	BPTF.p2	AK210116|Gm8203|666634|predicted pseudogene 8203
mm9_v1_chr2_-_58012447_58012596	12.0378	BPTF.p2	AF192525|Cytip|227929|cytohesin 1 interacting protein	AK089364|Cytip|227929|cytohesin 1 interacting protein	AF374273|Cytip|227929|cytohesin 1 interacting protein	AK152784|Cytip|227929|cytohesin 1 interacting protein	AK169575|Cytip|227929|cytohesin 1 interacting protein	BC007144|Cytip|227929|cytohesin 1 interacting protein	AK168343|Cytip|227929|cytohesin 1 interacting protein	AK037842|Cytip|227929|cytohesin 1 interacting protein	AK157859|Cytip|227929|cytohesin 1 interacting protein	AK166254|Cytip|227929|cytohesin 1 interacting protein	AK170544|Cytip|227929|cytohesin 1 interacting protein	AK170796|Cytip|227929|cytohesin 1 interacting protein	AK171467|Cytip|227929|cytohesin 1 interacting protein	AK172380|Cytip|227929|cytohesin 1 interacting protein	NM_139200|Cytip|227929|cytohesin 1 interacting protein	AK170301|Cytip|227929|cytohesin 1 interacting protein	AK172071|Cytip|227929|cytohesin 1 interacting protein	AK030882|Cytip|227929|cytohesin 1 interacting protein
mm9_v1_chr1_-_140071630_140071766	11.9	BPTF.p2	M11934|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M92933|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr3_+_142223490_142223591	11.8865	BPTF.p2	U44731|Gbp3|55932|guanylate binding protein 3
mm9_v1_chr10_-_111434231_111434250	11.7117	BPTF.p2	BC025083|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	AK155009|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	AK010768|Glipr1|73690|GLI pathogenesis-related 1 (glioma)
mm9_v1_chr10_+_51200463_51200512	11.6709	BPTF.p2	BC065784|Gp49a|14727|glycoprotein 49 A	AK171573|Gp49a|14727|glycoprotein 49 A	AK170836|Gp49a|14727|glycoprotein 49 A	AK170384|Gp49a|14727|glycoprotein 49 A	AK171133|Gp49a|14727|glycoprotein 49 A	AK171229|Gp49a|14727|glycoprotein 49 A	AK155817|Gp49a|14727|glycoprotein 49 A	AK089366|Gp49a|14727|glycoprotein 49 A	M65027|Gp49a|14727|glycoprotein 49 A	NM_008147|Gp49a|14727|glycoprotein 49 A	AK167751|Gp49a|14727|glycoprotein 49 A	AK155580|Gp49a|14727|glycoprotein 49 A	AK155788|Gp49a|14727|glycoprotein 49 A
mm9_v1_chr17_-_35971652_35971809	11.6216	BPTF.p2	AK080778|Tubb5|22154|tubulin, beta 5	AK088137|Tubb5|22154|tubulin, beta 5
mm9_v1_chr17_+_5343877_5344040	11.5656	BPTF.p2	AK049919|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK021005|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK048918|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr1_+_52687548_52687638	11.4093	BPTF.p2	NM_001142647|Tmem194b|227094|transmembrane protein 194B	AK030361|Tmem194b|227094|transmembrane protein 194B	AK036693|Tmem194b|227094|transmembrane protein 194B	AK048484|Tmem194b|227094|transmembrane protein 194B	AK170577|Tmem194b|227094|transmembrane protein 194B	AK086801|Tmem194b|227094|transmembrane protein 194B
mm9_v1_chr2_-_129094163_129094313	11.3553	BPTF.p2	AK008278|Ckap2l|70466|cytoskeleton associated protein 2-like
mm9_v1_chr5_+_106039499_106039528	11.3121	BPTF.p2	AK081556|Lrrc8c|100604|leucine rich repeat containing 8 family, member C
mm9_v1_chr10_+_126504125_126504226	11.2633	BPTF.p2	
mm9_v1_chr19_+_11566527_11566537	11.2421	BPTF.p2	NM_001164202|Gm8369|666926|predicted gene 8369
mm9_v1_chr11_-_79343891_79344047	11.2355	BPTF.p2	AK171332|Evi2a|14017|ecotropic viral integration site 2a	AK044098|Evi2a|14017|ecotropic viral integration site 2a	AK162958|Evi2a|14017|ecotropic viral integration site 2a	AK171594|Evi2a|14017|ecotropic viral integration site 2a	AK160302|Evi2a|14017|ecotropic viral integration site 2a	M34896|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr1_+_173612173_173612224	10.9913	BPTF.p2	X17501|Cd48|12506|CD48 antigen	X53526|Cd48|12506|CD48 antigen	AK007741|Cd48|12506|CD48 antigen	NM_007649|Cd48|12506|CD48 antigen	AK151601|Cd48|12506|CD48 antigen	AB196820|Cd48|12506|CD48 antigen	AB196821|Cd48|12506|CD48 antigen	AB196822|Cd48|12506|CD48 antigen	AB196823|Cd48|12506|CD48 antigen
mm9_v1_chr9_-_71011053_71011095	10.8812	BPTF.p2	BC024105|Aqp9|64008|aquaporin 9	AK050042|Aqp9|64008|aquaporin 9	NM_022026|Aqp9|64008|aquaporin 9
mm9_v1_chr11_-_98859189_98859196	10.684	BPTF.p2	U01915|Top2a|21973|topoisomerase (DNA) II alpha
mm9_v1_chr6_-_3349415_3349463	10.5942	BPTF.p2	AK172649|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr8_-_113824073_113824198	10.5795	BPTF.p2	AK137698|Rfwd3|234736|ring finger and WD repeat domain 3	BC096602|Rfwd3|234736|ring finger and WD repeat domain 3	AK146451|Rfwd3|234736|ring finger and WD repeat domain 3	BC018533|Rfwd3|234736|ring finger and WD repeat domain 3	AK137499|Rfwd3|234736|ring finger and WD repeat domain 3	AK139032|Rfwd3|234736|ring finger and WD repeat domain 3	BC023694|Rfwd3|234736|ring finger and WD repeat domain 3	NM_146218|Rfwd3|234736|ring finger and WD repeat domain 3
mm9_v1_chrX_+_20451640_20451750	10.4843	BPTF.p2	V00755|Timp1|21857|tissue inhibitor of metalloproteinase 1
mm9_v1_chr11_-_70465629_70465690	10.3996	BPTF.p2	AJ279848|Pfn1|18643|profilin 1
mm9_v1_chr2_+_153171730_153171874	10.2745	BPTF.p2	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr6_-_98877291_98877410	10.2498	BPTF.p2	
mm9_v1_chr7_+_25155279_25155362	10.2488	BPTF.p2	AK010943|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_001163510|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_008433|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK155910|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	BC010274|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr4_+_128688217_128688363	10.2393	BPTF.p2	
mm9_v1_chr10_-_80962881_80962881	10.236	BPTF.p2	AJ006074|S1pr4|13611|sphingosine-1-phosphate receptor 4	NM_010102|S1pr4|13611|sphingosine-1-phosphate receptor 4
mm9_v1_chr1_+_9788206_9788302	10.2216	BPTF.p2	NM_133220|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_177547|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK143836|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031133|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151793|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171120|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171186|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151867|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171678|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK172323|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK028722|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039247|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039427|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151181|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166414|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151996|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AF312007|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr4_+_114732112_114732131	10.1642	BPTF.p2	AK144164|Tal1|21349|T-cell acute lymphocytic leukemia 1	M59764|Tal1|21349|T-cell acute lymphocytic leukemia 1	NM_011527|Tal1|21349|T-cell acute lymphocytic leukemia 1
mm9_v1_chr4_+_86394436_86394546	10.0384	BPTF.p2	AK155220|Dennd4c|329877|DENN/MADD domain containing 4C	NM_001081014|Dennd4c|329877|DENN/MADD domain containing 4C	NM_184088|Dennd4c|329877|DENN/MADD domain containing 4C	AK154950|Dennd4c|329877|DENN/MADD domain containing 4C
mm9_v1_chrX_+_155970637_155970677	10.0343	BPTF.p2	BC075674|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene	AK145159|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene
mm9_v1_chr7_+_4225744_4225790	10.0327	BPTF.p2	NM_011093|Pira6|18729|paired-Ig-like receptor A6	U96687|Pira6|18729|paired-Ig-like receptor A6	AF041035|Pira6|18729|paired-Ig-like receptor A6	NM_008848|Pira6|18729|paired-Ig-like receptor A6
mm9_v1_chr4_+_140258090_140258179	9.97498	BPTF.p2	AK186216|Rcc2|108911|regulator of chromosome condensation 2	AK129370|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr5_-_65351226_65351309	9.95968	BPTF.p2	AK137502|Tlr6|21899|toll-like receptor 6	NM_011604|Tlr6|21899|toll-like receptor 6	BC055366|Tlr6|21899|toll-like receptor 6	AK154253|Tlr6|21899|toll-like receptor 6
mm9_v1_chr7_+_109590208_109590457	9.87627	BPTF.p2	NM_009103|Rrm1|20133|ribonucleotide reductase M1	M14224|Rrm1|20133|ribonucleotide reductase M1	AK199985|Rrm1|20133|ribonucleotide reductase M1	AK082135|Rrm1|20133|ribonucleotide reductase M1	BC066217|Rrm1|20133|ribonucleotide reductase M1	BC003299|Rrm1|20133|ribonucleotide reductase M1	AK168586|Rrm1|20133|ribonucleotide reductase M1	AK088043|Rrm1|20133|ribonucleotide reductase M1	AK137075|Rrm1|20133|ribonucleotide reductase M1	BC016450|Rrm1|20133|ribonucleotide reductase M1	K02927|Rrm1|20133|ribonucleotide reductase M1
mm9_v1_chr17_+_34052312_34052432	9.87039	BPTF.p2	
mm9_v1_chr12_-_27141303_27141316	9.84422	BPTF.p2	NM_021384|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr2_+_80193710_80193811	9.83408	BPTF.p2	
mm9_v1_chr7_-_25873560_25873562	9.83407	BPTF.p2	
mm9_v1_chr4_+_135750500_135750521	9.73139	BPTF.p2	AK033797|E2f2|242705|E2F transcription factor 2
mm9_v1_chr1_-_186556046_186556064	9.6733	BPTF.p2	AK154090|Hlx|15284|H2.0-like homeobox
mm9_v1_chrX_-_45866446_45866665	9.65748	BPTF.p2	AK211196|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AF100927|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AK133764|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	BC003292|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	DQ016499|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	NM_012019|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1
mm9_v1_chr10_+_79348991_79349057	9.64794	BPTF.p2	BC145800|Elane|50701|elastase, neutrophil expressed	AK143710|Elane|50701|elastase, neutrophil expressed	NM_015779|Elane|50701|elastase, neutrophil expressed
mm9_v1_chrX_+_155970593_155970627	9.5823	BPTF.p2	AK044001|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene	NM_001033472|A830080D01Rik|382252|RIKEN cDNA A830080D01 gene
mm9_v1_chr1_-_13579802_13579867	9.48636	BPTF.p2	CT010238|Tram1|72265|translocating chain-associating membrane protein 1	AY029764|Tram1|72265|translocating chain-associating membrane protein 1	AK164347|Tram1|72265|translocating chain-associating membrane protein 1
mm9_v1_chr16_+_19760300_19760490	9.48097	BPTF.p2	AK037166|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK083839|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159407|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159408|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_054052|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK032911|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK048010|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	BC063076|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm9_v1_chr3_+_68808879_68808941	9.45079	BPTF.p2	AK152804|Smc4|70099|structural maintenance of chromosomes 4	BC062939|Smc4|70099|structural maintenance of chromosomes 4	NM_133786|Smc4|70099|structural maintenance of chromosomes 4	AK010848|Smc4|70099|structural maintenance of chromosomes 4	AK133817|Smc4|70099|structural maintenance of chromosomes 4	AK088350|Smc4|70099|structural maintenance of chromosomes 4	AK088846|Smc4|70099|structural maintenance of chromosomes 4	BC061481|Smc4|70099|structural maintenance of chromosomes 4
mm9_v1_chr6_-_123239886_123239943	9.34754	BPTF.p2	AK152333|Clec4e|56619|C-type lectin domain family 4, member e	AK156437|Clec4e|56619|C-type lectin domain family 4, member e	AK036493|Clec4e|56619|C-type lectin domain family 4, member e	AK089286|Clec4e|56619|C-type lectin domain family 4, member e	AK150528|Clec4e|56619|C-type lectin domain family 4, member e	AK150899|Clec4e|56619|C-type lectin domain family 4, member e	AK151101|Clec4e|56619|C-type lectin domain family 4, member e	AK151912|Clec4e|56619|C-type lectin domain family 4, member e	AK153008|Clec4e|56619|C-type lectin domain family 4, member e	AK153308|Clec4e|56619|C-type lectin domain family 4, member e	AK155452|Clec4e|56619|C-type lectin domain family 4, member e	AK171103|Clec4e|56619|C-type lectin domain family 4, member e	AB024717|Clec4e|56619|C-type lectin domain family 4, member e	NM_019948|Clec4e|56619|C-type lectin domain family 4, member e
mm9_v1_chr15_-_72926936_72926959	9.33339	BPTF.p2	AK003962|1110029L17Rik|68722|RIKEN cDNA 1110029L17 gene
mm9_v1_chr14_-_25306175_25306259	9.26526	BPTF.p2	BC151168|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151002|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151169|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK143315|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC053071|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chrX_+_156065141_156065596	9.23992	BPTF.p2	AK049182|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK172022|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK080930|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135727|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK038540|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK208632|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr17_-_51951378_51951378	9.22615	BPTF.p2	AK158518|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163630|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr3_+_20008792_20008792	9.21922	BPTF.p2	BC039796|Hltf|20585|helicase-like transcription factor
mm9_v1_chr2_+_119444033_119444033	9.17526	BPTF.p2	BC100392|Nusap1|108907|nucleolar and spindle associated protein 1	NM_001042652|Nusap1|108907|nucleolar and spindle associated protein 1	NM_133851|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr8_+_47702617_47702644	8.91008	BPTF.p2	AK146226|Casp3|12367|caspase 3
mm9_v1_chr12_-_32893074_32893513	8.85794	BPTF.p2	BC051246|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137620|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146201|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AJ249280|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_020272|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137470|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK040543|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK132553|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146200|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide
mm9_v1_chr11_-_102180258_102180276	8.85524	BPTF.p2	AK004961|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr12_+_119082333_119082371	8.81246	BPTF.p2	BC006933|Cdca7l|217946|cell division cycle associated 7 like	NM_146040|Cdca7l|217946|cell division cycle associated 7 like	AK149673|Cdca7l|217946|cell division cycle associated 7 like	BC071198|Cdca7l|217946|cell division cycle associated 7 like
mm9_v1_chr6_+_136467315_136467378	8.77828	BPTF.p2	AK082697|Atf7ip|54343|activating transcription factor 7 interacting protein	AK167542|Atf7ip|54343|activating transcription factor 7 interacting protein	BC048827|Atf7ip|54343|activating transcription factor 7 interacting protein	AK134252|Atf7ip|54343|activating transcription factor 7 interacting protein	BC052460|Atf7ip|54343|activating transcription factor 7 interacting protein	NM_019426|Atf7ip|54343|activating transcription factor 7 interacting protein	AJ132702|Atf7ip|54343|activating transcription factor 7 interacting protein	BC022714|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr1_-_175465858_175465981	8.76019	BPTF.p2	BC094916|BC094916|545384|cDNA sequence BC094916
mm9_v1_chr11_-_54601093_54601128	8.70158	BPTF.p2	BC048935|Cdc42se2|72729|CDC42 small effector 2	AK080473|Cdc42se2|72729|CDC42 small effector 2	AK146313|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr17_+_34375847_34375923	8.61535	BPTF.p2	AK172191|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155650|H2-Ob|15002|histocompatibility 2, O region beta locus	NM_010389|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172273|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172299|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155144|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127027|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127028|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100707|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100710|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100709|H2-Ob|15002|histocompatibility 2, O region beta locus
mm9_v1_chr6_+_38542722_38542769	8.61465	BPTF.p2	BC002314|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr13_+_55828701_55828778	8.55807	BPTF.p2	NM_028281|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	AK012465|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	BC028642|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
mm9_v1_chr9_+_123429291_123429490	8.51039	BPTF.p2	AK180316|Limd1|29806|LIM domains containing 1	AK212225|Limd1|29806|LIM domains containing 1	AK215267|Limd1|29806|LIM domains containing 1	AK215631|Limd1|29806|LIM domains containing 1	AK216846|Limd1|29806|LIM domains containing 1	AK220081|Limd1|29806|LIM domains containing 1	AK210611|Limd1|29806|LIM domains containing 1
mm9_v1_chr17_-_46290499_46290503	8.47758	BPTF.p2	AK156569|Mad2l1bp|66591|MAD2L1 binding protein	NM_025649|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr10_-_26093761_26093964	8.45197	BPTF.p2	BC085192|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr10_-_90633199_90633208	8.44681	BPTF.p2	AK159161|Tmpo|21917|thymopoietin
mm9_v1_chr16_+_49913305_49913369	8.34699	BPTF.p2	AK050387|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr2_+_150735306_150735352	8.33933	BPTF.p2	NM_001163476|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	NM_027014|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	AK013116|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	BC027537|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)
mm9_v1_chr13_-_56280161_56280245	8.31451	BPTF.p2	AK036643|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	NM_001168615|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	NM_145976|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B
mm9_v1_chr15_+_83393975_83394050	8.23169	BPTF.p2	NM_009775|Tspo|12257|translocator protein	AK151824|Tspo|12257|translocator protein	AK153273|Tspo|12257|translocator protein	AK165822|Tspo|12257|translocator protein	AK166125|Tspo|12257|translocator protein	AK151569|Tspo|12257|translocator protein	AK156489|Tspo|12257|translocator protein	AK172384|Tspo|12257|translocator protein	AK149743|Tspo|12257|translocator protein	AK151421|Tspo|12257|translocator protein	AK152860|Tspo|12257|translocator protein	AK153159|Tspo|12257|translocator protein	AK165450|Tspo|12257|translocator protein	AK150516|Tspo|12257|translocator protein	AK152082|Tspo|12257|translocator protein	AK152827|Tspo|12257|translocator protein	BC002055|Tspo|12257|translocator protein	D21207|Tspo|12257|translocator protein
mm9_v1_chr7_+_65913571_65913874	8.21069	BPTF.p2	NM_009728|Atp10a|11982|ATPase, class V, type 10A	AK132174|Atp10a|11982|ATPase, class V, type 10A	AK172149|Atp10a|11982|ATPase, class V, type 10A	AF156549|Atp10a|11982|ATPase, class V, type 10A	BC138356|Atp10a|11982|ATPase, class V, type 10A	BC138357|Atp10a|11982|ATPase, class V, type 10A	AK172972|Atp10a|11982|ATPase, class V, type 10A	AF011337|Atp10a|11982|ATPase, class V, type 10A
mm9_v1_chr2_+_103809709_103809717	8.20177	BPTF.p2	NM_001142336|Lmo2|16909|LIM domain only 2
mm9_v1_chr7_-_56136965_56137089	8.17438	BPTF.p2	AY957576|E2f8|108961|E2F transcription factor 8
mm9_v1_chr11_-_106640755_106640876	8.1504	BPTF.p2	AF177202|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC119131|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC144810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK042777|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK041591|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK164730|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK169977|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	NM_015810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit
mm9_v1_chr8_+_90806890_90806890	8.07135	BPTF.p2	AK155646|Adcy7|11513|adenylate cyclase 7	NM_001109756|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr13_-_67710581_67710643	8.04308	BPTF.p2	AK170565|AA987161|380856|expressed sequence AA987161	BC047145|AA987161|380856|expressed sequence AA987161	AK137425|AA987161|380856|expressed sequence AA987161
mm9_v1_chr15_+_78427476_78427603	8.01785	BPTF.p2	NM_028195|Cyth4|72318|cytohesin 4	BC139054|Cyth4|72318|cytohesin 4	BC139056|Cyth4|72318|cytohesin 4	BC145528|Cyth4|72318|cytohesin 4	AK220198|Cyth4|72318|cytohesin 4	AF079972|Cyth4|72318|cytohesin 4	AK036679|Cyth4|72318|cytohesin 4	AK152306|Cyth4|72318|cytohesin 4	AK157026|Cyth4|72318|cytohesin 4	AK152909|Cyth4|72318|cytohesin 4	AK030956|Cyth4|72318|cytohesin 4	AK151402|Cyth4|72318|cytohesin 4	BC018505|Cyth4|72318|cytohesin 4
mm9_v1_chr16_-_75909440_75909580	7.95938	BPTF.p2	AK041340|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AF222928|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AK041566|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	AK053946|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	BC052906|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	BC064778|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	DQ333189|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1	NM_023380|Samsn1|67742|SAM domain, SH3 domain and nuclear localization signals, 1
mm9_v1_chr1_-_173582969_173583167	7.93903	BPTF.p2	AK016183|Slamf7|75345|SLAM family member 7	AK030135|Slamf7|75345|SLAM family member 7	AK030148|Slamf7|75345|SLAM family member 7	NM_144539|Slamf7|75345|SLAM family member 7
mm9_v1_chr1_+_173612132_173612157	7.93424	BPTF.p2	AK146173|Cd48|12506|CD48 antigen	AK088027|Cd48|12506|CD48 antigen	AK084984|Cd48|12506|CD48 antigen	BC060977|Cd48|12506|CD48 antigen
mm9_v1_chr1_+_132762248_132762329	7.85982	BPTF.p2	BC116674|Faim3|69169|Fas apoptotic inhibitory molecule 3	BC118505|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr2_+_129442079_129442192	7.84967	BPTF.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr18_-_14131046_14131241	7.78338	BPTF.p2	BC021376|Zfp521|225207|zinc finger protein 521	AK052655|Zfp521|225207|zinc finger protein 521	AY147406|Zfp521|225207|zinc finger protein 521	NM_145492|Zfp521|225207|zinc finger protein 521
mm9_v1_chr10_-_58904445_58904526	7.7809	BPTF.p2	AY180915|Oit3|18302|oncoprotein induced transcript 3	AF356506|Oit3|18302|oncoprotein induced transcript 3	AK050081|Oit3|18302|oncoprotein induced transcript 3	AK040570|Oit3|18302|oncoprotein induced transcript 3	NM_010959|Oit3|18302|oncoprotein induced transcript 3
mm9_v1_chr6_-_38238095_38238171	7.71681	BPTF.p2	AK045178|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr11_+_81859212_81859265	7.7115	BPTF.p2	NM_013654|Ccl7|20306|chemokine (C-C motif) ligand 7	AK078827|Ccl7|20306|chemokine (C-C motif) ligand 7	BC061126|Ccl7|20306|chemokine (C-C motif) ligand 7	S71251|Ccl7|20306|chemokine (C-C motif) ligand 7	AF128193|Ccl7|20306|chemokine (C-C motif) ligand 7	AF128194|Ccl7|20306|chemokine (C-C motif) ligand 7	L04694|Ccl7|20306|chemokine (C-C motif) ligand 7	S50588|Ccl7|20306|chemokine (C-C motif) ligand 7	Z12297|Ccl7|20306|chemokine (C-C motif) ligand 7
mm9_v1_chr7_-_125629996_125630002	7.7101	BPTF.p2	AK164927|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK081844|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chrX_-_103163796_103163937	7.6975	BPTF.p2	BC023242|Magt1|67075|magnesium transporter 1
mm9_v1_chr12_-_119474010_119474093	7.61124	BPTF.p2	AK017738|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr12_-_27141277_27141301	7.60883	BPTF.p2	AF442152|Rsad2|58185|radical S-adenosyl methionine domain containing 2	CT010378|Rsad2|58185|radical S-adenosyl methionine domain containing 2	BC057868|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AF236064|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152600|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK010906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK036373|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150406|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150616|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150835|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151185|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151286|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151331|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151339|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151412|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151538|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151770|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151825|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151833|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151846|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151909|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151940|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152050|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152075|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152235|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152310|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152354|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152631|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152796|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152861|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152880|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152962|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153077|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153078|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153306|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153350|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK159147|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150812|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152493|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152601|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK149900|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150069|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150347|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150425|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150525|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150536|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150684|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150731|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150783|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150788|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151140|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151191|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151206|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151308|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151389|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151410|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151414|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151476|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151502|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151954|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151971|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152065|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152239|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152241|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152644|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152664|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152701|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152895|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152934|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153003|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153024|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153232|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153234|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153318|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153324|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153453|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153556|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153062|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chrX_+_50265390_50265552	7.60323	BPTF.p2	AK157045|Phf6|70998|PHD finger protein 6	AK012211|Phf6|70998|PHD finger protein 6	AK077803|Phf6|70998|PHD finger protein 6	AK163345|Phf6|70998|PHD finger protein 6	BC043127|Phf6|70998|PHD finger protein 6	NM_027642|Phf6|70998|PHD finger protein 6	AK141804|Phf6|70998|PHD finger protein 6	BC055330|Phf6|70998|PHD finger protein 6	AK122560|Phf6|70998|PHD finger protein 6	AK028498|Phf6|70998|PHD finger protein 6	AK038320|Phf6|70998|PHD finger protein 6	BC057374|Phf6|70998|PHD finger protein 6	AK192342|Phf6|70998|PHD finger protein 6	AK213676|Phf6|70998|PHD finger protein 6
mm9_v1_chr11_-_102180282_102180305	7.56704	BPTF.p2	AK128947|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr2_-_126719808_126719853	7.53038	BPTF.p2	AK080421|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene	AK081953|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene
mm9_v1_chr2_-_51828440_51828551	7.51225	BPTF.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr6_-_30340952_30341009	7.49753	BPTF.p2	BC037445|Zc3hc1|232679|zinc finger, C3HC type 1	AJ537495|Zc3hc1|232679|zinc finger, C3HC type 1	AK151694|Zc3hc1|232679|zinc finger, C3HC type 1	BC050141|Zc3hc1|232679|zinc finger, C3HC type 1	AK088527|Zc3hc1|232679|zinc finger, C3HC type 1	AK167465|Zc3hc1|232679|zinc finger, C3HC type 1	NM_172735|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr10_-_12684064_12684078	7.49577	BPTF.p2	NM_001163590|Stx11|74732|syntaxin 11	NM_001163591|Stx11|74732|syntaxin 11	NM_029075|Stx11|74732|syntaxin 11
mm9_v1_chrX_+_83115611_83115703	7.45797	BPTF.p2	NM_001163539|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK155591|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK154689|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene
mm9_v1_chr5_+_93602126_93602279	7.42312	BPTF.p2	AK018083|Sept11|52398|septin 11	AK075989|Sept11|52398|septin 11
mm9_v1_chr4_+_140703847_140703905	7.41358	BPTF.p2	AK165284|Fbxo42|213499|F-box protein 42	AK151503|Fbxo42|213499|F-box protein 42
mm9_v1_chr13_-_74832039_74832154	7.39855	BPTF.p2	AK037098|Cast|12380|calpastatin
mm9_v1_chr17_-_41071432_41071526	7.39171	BPTF.p2	BC018524|Cenpq|83815|centromere protein Q	AK076094|Cenpq|83815|centromere protein Q	AK011998|Cenpq|83815|centromere protein Q	AK012179|Cenpq|83815|centromere protein Q	AK020040|Cenpq|83815|centromere protein Q	NM_031863|Cenpq|83815|centromere protein Q	AK157569|Cenpq|83815|centromere protein Q
mm9_v1_chr5_+_138628733_138628797	7.38632	BPTF.p2	AK011474|Cnpy4|66455|canopy 4 homolog (zebrafish)	AK033219|Cnpy4|66455|canopy 4 homolog (zebrafish)	AK051562|Cnpy4|66455|canopy 4 homolog (zebrafish)	NM_178612|Cnpy4|66455|canopy 4 homolog (zebrafish)	AK012968|Cnpy4|66455|canopy 4 homolog (zebrafish)	BC086647|Cnpy4|66455|canopy 4 homolog (zebrafish)
mm9_v1_chrX_-_154036557_154036600	7.36844	BPTF.p2	BC038343|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK036071|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK164486|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	AK047841|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr10_-_90633803_90633857	7.34194	BPTF.p2	AK192607|Tmpo|21917|thymopoietin	AK011988|Tmpo|21917|thymopoietin	AK011992|Tmpo|21917|thymopoietin
mm9_v1_chr2_-_113688771_113688881	7.33774	BPTF.p2	BC050875|Arhgap11a|228482|Rho GTPase activating protein 11A	AK129034|Arhgap11a|228482|Rho GTPase activating protein 11A	BC058105|Arhgap11a|228482|Rho GTPase activating protein 11A	NM_181416|Arhgap11a|228482|Rho GTPase activating protein 11A	AK162074|Arhgap11a|228482|Rho GTPase activating protein 11A
mm9_v1_chr17_-_46290473_46290486	7.32757	BPTF.p2	AK002377|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr1_-_180267913_180267920	7.2829	BPTF.p2	AK165844|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	NM_016805|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK089058|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK145682|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159614|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK167200|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK145499|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK162264|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr7_-_3796619_3796646	7.27272	BPTF.p2	U96683|Pira2|18725|paired-Ig-like receptor A2	AF288356|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96682|Pira1|18722|paired-Ig-like receptor A1	BC026937|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
mm9_v1_chr5_+_124199713_124199760	7.23179	BPTF.p2	NM_001042421|Kntc1|208628|kinetochore associated 1	AK172905|Kntc1|208628|kinetochore associated 1
mm9_v1_chr6_+_137703029_137703138	7.22753	BPTF.p2	AK145820|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK168204|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK012558|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK008033|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK030961|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK075963|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150273|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK169418|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK152462|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK034347|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	BC016218|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK083298|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	NM_172733|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	AK150712|Dera|232449|2-deoxyribose-5-phosphate aldolase homolog (C. elegans)
mm9_v1_chr7_-_3849680_3849726	7.17133	BPTF.p2	U96686|Pira5|18728|paired-Ig-like receptor A5	AF055896|Pira11|18724|paired-Ig-like receptor A11	AF041036|Pira11|18724|paired-Ig-like receptor A11	BC150155|Pira11|18724|paired-Ig-like receptor A11	NM_001166672|Gm14548|100038909|predicted gene 14548	NM_011091|Pira4|18727|paired-Ig-like receptor A4	U96685|Pira4|18727|paired-Ig-like receptor A4	BC103528|Pira11|18724|paired-Ig-like receptor A11	BC103529|Pira11|18724|paired-Ig-like receptor A11	BC139803|Pira11|18724|paired-Ig-like receptor A11	NM_011088|Pira11|18724|paired-Ig-like receptor A11	AK165650|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011094|Pira7|18730|paired-Ig-like receptor A7	U96688|Pira7|18730|paired-Ig-like receptor A7	BC150712|Pira11|18724|paired-Ig-like receptor A11
mm9_v1_chr7_-_111501738_111501875	7.15316	BPTF.p2	BC062252|9230105E10Rik|319236|RIKEN cDNA 9230105E10 gene	AK146437|9230105E10Rik|319236|RIKEN cDNA 9230105E10 gene	BC038937|9230105E10Rik|319236|RIKEN cDNA 9230105E10 gene	NM_175677|9230105E10Rik|319236|RIKEN cDNA 9230105E10 gene	AK033764|9230105E10Rik|319236|RIKEN cDNA 9230105E10 gene	NM_001146007|9230105E10Rik|319236|RIKEN cDNA 9230105E10 gene	AK050485|9230105E10Rik|319236|RIKEN cDNA 9230105E10 gene
mm9_v1_chr2_-_6466116_6466118	7.11339	BPTF.p2	AK134815|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr5_+_115346942_115346944	7.11327	BPTF.p2	NM_011854|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AF068835|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr4_-_6202747_6202782	7.05473	BPTF.p2	BC130261|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050020|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050220|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050260|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	NM_007824|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050210|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1
mm9_v1_chr6_+_122576437_122576540	7.04236	BPTF.p2	AK135769|Dppa3|73708|developmental pluripotency-associated 3	AK136263|Dppa3|73708|developmental pluripotency-associated 3	AY134859|Dppa3|73708|developmental pluripotency-associated 3	AF490347|Dppa3|73708|developmental pluripotency-associated 3	AY082485|Dppa3|73708|developmental pluripotency-associated 3	NM_139218|Dppa3|73708|developmental pluripotency-associated 3	BC099433|Dppa3|73708|developmental pluripotency-associated 3	BC100331|Dppa3|73708|developmental pluripotency-associated 3	BC107340|Dppa3|73708|developmental pluripotency-associated 3	BC107341|Dppa3|73708|developmental pluripotency-associated 3	AK010723|Dppa3|73708|developmental pluripotency-associated 3	AB072734|Dppa3|73708|developmental pluripotency-associated 3
mm9_v1_chr8_-_40727989_40728040	7.02514	BPTF.p2	BC003814|Msr1|20288|macrophage scavenger receptor 1	AK151403|Msr1|20288|macrophage scavenger receptor 1	AK154806|Msr1|20288|macrophage scavenger receptor 1	AK028480|Msr1|20288|macrophage scavenger receptor 1	AK089178|Msr1|20288|macrophage scavenger receptor 1	AK155589|Msr1|20288|macrophage scavenger receptor 1	AK155362|Msr1|20288|macrophage scavenger receptor 1	AK150518|Msr1|20288|macrophage scavenger receptor 1	AK151855|Msr1|20288|macrophage scavenger receptor 1	NM_001113326|Msr1|20288|macrophage scavenger receptor 1	NM_031195|Msr1|20288|macrophage scavenger receptor 1
mm9_v1_chr9_-_44334460_44334514	7.01672	BPTF.p2	X71788|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK155954|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK156087|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK157016|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	BC064059|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	NM_007551|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK089611|Cxcr5|12145|chemokine (C-X-C motif) receptor 5
mm9_v1_chr17_-_35971913_35971974	7.0036	BPTF.p2	AK188748|Tubb5|22154|tubulin, beta 5	AK196888|Tubb5|22154|tubulin, beta 5
mm9_v1_chr11_-_53520771_53520798	6.92324	BPTF.p2	BC058180|Rad50|19360|RAD50 homolog (S. cerevisiae)	U66887|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr6_-_30341017_30341032	6.91755	BPTF.p2	AK168071|Zc3hc1|232679|zinc finger, C3HC type 1	AK146228|Zc3hc1|232679|zinc finger, C3HC type 1	AK167992|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr6_-_129187965_129188001	6.89348	BPTF.p2	AK030376|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene	AK009064|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene
mm9_v1_chr6_+_48689045_48689097	6.8736	BPTF.p2	NM_008376|Gimap1|16205|GTPase, IMAP family member 1	NM_175860|Gimap1|16205|GTPase, IMAP family member 1	AK156732|Gimap1|16205|GTPase, IMAP family member 1	BC132601|Gimap1|16205|GTPase, IMAP family member 1	BC132603|Gimap1|16205|GTPase, IMAP family member 1	AK169133|Gimap1|16205|GTPase, IMAP family member 1
mm9_v1_chr17_-_71199129_71199153	6.85886	BPTF.p2	NM_001164076|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr11_-_102180374_102180491	6.82675	BPTF.p2	BC004676|Ubtf|21429|upstream binding transcription factor, RNA polymerase I	NM_011551|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr8_+_107694536_107694875	6.80249	BPTF.p2	AK089094|Cbfb|12400|core binding factor beta	NM_001161456|Cbfb|12400|core binding factor beta	NM_001161457|Cbfb|12400|core binding factor beta	NM_001161458|Cbfb|12400|core binding factor beta	NM_022309|Cbfb|12400|core binding factor beta	D14570|Cbfb|12400|core binding factor beta	D14571|Cbfb|12400|core binding factor beta	D14572|Cbfb|12400|core binding factor beta	BC026749|Cbfb|12400|core binding factor beta	BC040752|Cbfb|12400|core binding factor beta	BC006763|Cbfb|12400|core binding factor beta	L03305|Cbfb|12400|core binding factor beta	L03306|Cbfb|12400|core binding factor beta
mm9_v1_chr13_+_33057312_33057381	6.78186	BPTF.p2	AK078753|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK154048|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK171741|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK084785|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	BC061050|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	NM_011454|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	U96707|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b
mm9_v1_chr7_-_87857062_87857123	6.78097	BPTF.p2	
mm9_v1_chr15_-_80390899_80390899	6.76796	BPTF.p2	BC158112|Enthd1|383075|ENTH domain containing 1	NM_001163189|Enthd1|383075|ENTH domain containing 1
mm9_v1_chr5_-_66000506_66000618	6.72622	BPTF.p2	AK083707|B230308N11Rik|320060|RIKEN cDNA B230308N11 gene
mm9_v1_chr12_-_80108263_80108327	6.7234	BPTF.p2	BC066067|Tmem229b|268567|transmembrane protein 229B	NM_178745|Tmem229b|268567|transmembrane protein 229B	AK033403|Tmem229b|268567|transmembrane protein 229B	AK053623|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chr10_+_40290141_40290167	6.71371	BPTF.p2	DQ164804|Slc22a16|70840|solute carrier family 22 (organic cation transporter), member 16	BC138326|Slc22a16|70840|solute carrier family 22 (organic cation transporter), member 16	BC138327|Slc22a16|70840|solute carrier family 22 (organic cation transporter), member 16	BC100473|Slc22a16|70840|solute carrier family 22 (organic cation transporter), member 16	NM_027572|Slc22a16|70840|solute carrier family 22 (organic cation transporter), member 16
mm9_v1_chr16_+_23224955_23224980	6.6658	BPTF.p2	AK084124|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr7_+_109614267_109614297	6.65904	BPTF.p2	AK200772|Rrm1|20133|ribonucleotide reductase M1	AK203165|Rrm1|20133|ribonucleotide reductase M1	AK209968|Rrm1|20133|ribonucleotide reductase M1	AK211974|Rrm1|20133|ribonucleotide reductase M1
mm9_v1_chr11_+_54336372_54336447	6.65215	BPTF.p2	AK049228|Rapgef6|192786|Rap guanine nucleotide exchange factor (GEF) 6	AK045540|Rapgef6|192786|Rap guanine nucleotide exchange factor (GEF) 6	BC141182|Rapgef6|192786|Rap guanine nucleotide exchange factor (GEF) 6	BC145503|Rapgef6|192786|Rap guanine nucleotide exchange factor (GEF) 6
mm9_v1_chr9_+_106109125_106109148	6.65017	BPTF.p2	AK002699|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK087422|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK003997|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)
mm9_v1_chr12_+_82049290_82049329	6.6414	BPTF.p2	AK135336|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chrX_-_9046362_9046456	6.6278	BPTF.p2	U43384|Cybb|13058|cytochrome b-245, beta polypeptide	AK033570|Cybb|13058|cytochrome b-245, beta polypeptide	AK053920|Cybb|13058|cytochrome b-245, beta polypeptide	AK079926|Cybb|13058|cytochrome b-245, beta polypeptide	BC071229|Cybb|13058|cytochrome b-245, beta polypeptide	BC042838|Cybb|13058|cytochrome b-245, beta polypeptide	AK152257|Cybb|13058|cytochrome b-245, beta polypeptide	AK153154|Cybb|13058|cytochrome b-245, beta polypeptide	AK153259|Cybb|13058|cytochrome b-245, beta polypeptide	AK171526|Cybb|13058|cytochrome b-245, beta polypeptide	FJ168469|Cybb|13058|cytochrome b-245, beta polypeptide	AK154126|Cybb|13058|cytochrome b-245, beta polypeptide	NM_007807|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr2_+_112124767_112124844	6.57051	BPTF.p2	AF211855|Slc12a6|107723|solute carrier family 12, member 6	NM_133648|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr1_+_87546558_87546676	6.54039	BPTF.p2	AK042095|Sp100|20684|nuclear antigen Sp100	AK080004|Sp100|20684|nuclear antigen Sp100	AK152348|Sp100|20684|nuclear antigen Sp100	U83630|Sp100|20684|nuclear antigen Sp100	AK146054|Sp100|20684|nuclear antigen Sp100	AK153487|Sp100|20684|nuclear antigen Sp100	BC069183|Sp100|20684|nuclear antigen Sp100	AK083304|Sp100|20684|nuclear antigen Sp100	NM_013673|Sp100|20684|nuclear antigen Sp100	CT010199|Sp100|20684|nuclear antigen Sp100	U83636|Sp100|20684|nuclear antigen Sp100
mm9_v1_chr14_+_51563976_51563977	6.49739	BPTF.p2	AK153451|Pnp|18950|purine-nucleoside phosphorylase	NM_013632|Pnp|18950|purine-nucleoside phosphorylase
mm9_v1_chr11_+_83251195_83251208	6.47109	BPTF.p2	AK006174|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	NM_025492|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	AK005809|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	BC152320|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene
mm9_v1_chr7_+_77509969_77510044	6.46431	BPTF.p2	BC070425|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr9_-_114690887_114691007	6.4561	BPTF.p2	AK151785|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AF188504|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168280|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	NM_133978|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC038633|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK167886|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC026773|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168024|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AY241869|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK040123|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7
mm9_v1_chr4_-_149075697_149075737	6.44094	BPTF.p2	AK040867|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK153304|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK155835|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK169494|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_001029837|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm9_v1_chr1_+_58042183_58042183	6.43377	BPTF.p2	NM_001177867|Sgol2|68549|shugoshin-like 2 (S. pombe)
mm9_v1_chr16_+_44867209_44867209	6.40964	BPTF.p2	AY230198|Cd200r2|271375|Cd200 receptor 2	NM_206535|Cd200r2|271375|Cd200 receptor 2
mm9_v1_chr12_+_3891743_3891823	6.39815	BPTF.p2	AF480164|Dnmt3a|13435|DNA methyltransferase 3A	NM_153743|Dnmt3a|13435|DNA methyltransferase 3A	AK157792|Dnmt3a|13435|DNA methyltransferase 3A	AK077792|Dnmt3a|13435|DNA methyltransferase 3A	AK136170|Dnmt3a|13435|DNA methyltransferase 3A
mm9_v1_chr11_+_11586215_11586246	6.39618	BPTF.p2	NM_001025597|Ikzf1|22778|IKAROS family zinc finger 1	NM_009578|Ikzf1|22778|IKAROS family zinc finger 1	AK036833|Ikzf1|22778|IKAROS family zinc finger 1	AK040268|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr13_-_55201655_55201679	6.39104	BPTF.p2	AK052704|Uimc1|20184|ubiquitin interaction motif containing 1	NM_011307|Uimc1|20184|ubiquitin interaction motif containing 1	AK078206|Uimc1|20184|ubiquitin interaction motif containing 1	AK161177|Uimc1|20184|ubiquitin interaction motif containing 1	AK160926|Uimc1|20184|ubiquitin interaction motif containing 1
mm9_v1_chr1_+_132762353_132762436	6.39069	BPTF.p2	AK007714|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK155943|Faim3|69169|Fas apoptotic inhibitory molecule 3	NM_026976|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK156523|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227385|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227386|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227387|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227388|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227389|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227390|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227391|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227392|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227393|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr3_-_19935200_19935283	6.38158	BPTF.p2	AK170581|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK034377|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK169855|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	BC058235|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)
mm9_v1_chr11_-_60624733_60624766	6.37952	BPTF.p2	NM_009171|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chrX_-_139401258_139401275	6.37602	BPTF.p2	AJ243485|Ammecr1|56068|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human)	AK051736|Ammecr1|56068|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human)	NM_019496|Ammecr1|56068|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human)
mm9_v1_chr8_-_112102946_112102953	6.35533	BPTF.p2	BC138872|Hp|15439|haptoglobin	M96827|Hp|15439|haptoglobin
mm9_v1_chr2_-_33323966_33324113	6.34123	BPTF.p2	AK206442|Zbtb43|71834|zinc finger and BTB domain containing 43	AK212293|Zbtb43|71834|zinc finger and BTB domain containing 43	AK122277|Zbtb43|71834|zinc finger and BTB domain containing 43	AK005818|Zbtb43|71834|zinc finger and BTB domain containing 43	AK147806|Zbtb43|71834|zinc finger and BTB domain containing 43	BC043117|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_001025594|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_027947|Zbtb43|71834|zinc finger and BTB domain containing 43
mm9_v1_chr13_-_67500685_67500702	6.3389	BPTF.p2	AK083314|Zfp429|72807|zinc finger protein 429	BC046484|Zfp429|72807|zinc finger protein 429	NM_001080941|Zfp429|72807|zinc finger protein 429
mm9_v1_chr4_+_135750199_135750281	6.29765	BPTF.p2	
mm9_v1_chr9_-_21940154_21940189	6.28885	BPTF.p2	AK010865|Acp5|11433|acid phosphatase 5, tartrate resistant	AK011915|Acp5|11433|acid phosphatase 5, tartrate resistant	NM_001102405|Acp5|11433|acid phosphatase 5, tartrate resistant
mm9_v1_chr4_+_135728600_135728662	6.28363	BPTF.p2	BC062101|E2f2|242705|E2F transcription factor 2
mm9_v1_chr2_+_104430617_104430708	6.26517	BPTF.p2	AK158169|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_001037326|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_145529|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	NM_177253|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	BC003241|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	BC058605|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3	AK028899|Cstf3|228410|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm9_v1_chr11_+_62416376_62416390	6.26106	BPTF.p2	AK010427|2410006H16Rik|69221|RIKEN cDNA 2410006H16 gene	AK157519|2410006H16Rik|69221|RIKEN cDNA 2410006H16 gene
mm9_v1_chr10_+_128236561_128236694	6.2475	BPTF.p2	AK135651|Mmp19|58223|matrix metallopeptidase 19
mm9_v1_chr1_-_58558259_58558259	6.241	BPTF.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr7_+_111392998_111393087	6.23416	BPTF.p2	AK171840|Trim34a|94094|tripartite motif-containing 34A	AK172135|Trim34a|94094|tripartite motif-containing 34A	AF220139|Trim34a|94094|tripartite motif-containing 34A
mm9_v1_chr9_-_57110250_57110427	6.22178	BPTF.p2	BC150963|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	BC150965|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	BC118527|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK006055|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK145074|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK155015|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK029230|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK031730|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK044396|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK155487|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK165963|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	NM_028820|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK080676|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene	AK169617|1700017B05Rik|74211|RIKEN cDNA 1700017B05 gene
mm9_v1_chr13_-_107726930_107727002	6.21549	BPTF.p2	BC031900|Ipo11|76582|importin 11	BC029746|Ipo11|76582|importin 11	NM_029665|Ipo11|76582|importin 11
mm9_v1_chr14_+_70945119_70945160	6.21236	BPTF.p2	AK012301|Reep4|72549|receptor accessory protein 4
mm9_v1_chr16_+_23224889_23224926	6.21093	BPTF.p2	BC096026|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	AF153680|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr6_+_83293435_83293444	6.18261	BPTF.p2	AK196174|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr3_+_142223007_142223016	6.18213	BPTF.p2	AK132266|Gbp3|55932|guanylate binding protein 3	NM_018734|Gbp3|55932|guanylate binding protein 3
mm9_v1_chr4_-_46579311_46579311	6.1727	BPTF.p2	AK030097|Coro2a|107684|coronin, actin binding protein 2A	NM_178893|Coro2a|107684|coronin, actin binding protein 2A
mm9_v1_chr11_+_102110161_102110288	6.1683	BPTF.p2	NM_153544|BC030867|217216|cDNA sequence BC030867	AK029811|BC030867|217216|cDNA sequence BC030867	BC030867|BC030867|217216|cDNA sequence BC030867	BC108338|BC030867|217216|cDNA sequence BC030867	BC085317|BC030867|217216|cDNA sequence BC030867
mm9_v1_chr2_+_78709363_78709419	6.12534	BPTF.p2	AK168072|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	AK048227|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	AK076011|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	X92664|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr5_+_34868420_34868522	6.12271	BPTF.p2	AK155898|Sh3bp2|24055|SH3-domain binding protein 2	NM_011893|Sh3bp2|24055|SH3-domain binding protein 2	AK155103|Sh3bp2|24055|SH3-domain binding protein 2	BC010198|Sh3bp2|24055|SH3-domain binding protein 2	L14543|Sh3bp2|24055|SH3-domain binding protein 2	AK089455|Sh3bp2|24055|SH3-domain binding protein 2
mm9_v1_chr6_-_3349470_3349570	6.10917	BPTF.p2	BC079894|Samd9l|209086|sterile alpha motif domain containing 9-like	AK052535|Samd9l|209086|sterile alpha motif domain containing 9-like	NM_010156|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr17_+_35187185_35187282	6.03095	BPTF.p2	AK167765|Clic1|114584|chloride intracellular channel 1	BC004658|Clic1|114584|chloride intracellular channel 1	NM_033444|Clic1|114584|chloride intracellular channel 1	AK150611|Clic1|114584|chloride intracellular channel 1
mm9_v1_chr6_+_48597232_48597434	6.01989	BPTF.p2	AK134199|Gimap8|243374|GTPase, IMAP family member 8	NM_001077410|Gimap8|243374|GTPase, IMAP family member 8	AB178029|Gimap8|243374|GTPase, IMAP family member 8	AK155985|Gimap8|243374|GTPase, IMAP family member 8	NM_212486|Gimap8|243374|GTPase, IMAP family member 8	BC137943|Gimap8|243374|GTPase, IMAP family member 8	BC137944|Gimap8|243374|GTPase, IMAP family member 8	AJ617674|Gimap8|243374|GTPase, IMAP family member 8
mm9_v1_chr14_+_103446193_103446199	6.00512	BPTF.p2	AK036446|Irg1|16365|immunoresponsive gene 1
mm9_v1_chr14_-_52780511_52780625	5.99136	BPTF.p2	AK082901|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)
mm9_v1_chr14_+_103446209_103446258	5.98838	BPTF.p2	NM_008392|Irg1|16365|immunoresponsive gene 1	AK152177|Irg1|16365|immunoresponsive gene 1	AK152248|Irg1|16365|immunoresponsive gene 1	AK152332|Irg1|16365|immunoresponsive gene 1	AK152635|Irg1|16365|immunoresponsive gene 1	AK153013|Irg1|16365|immunoresponsive gene 1	AK172298|Irg1|16365|immunoresponsive gene 1	AK172001|Irg1|16365|immunoresponsive gene 1	AK089891|Irg1|16365|immunoresponsive gene 1
mm9_v1_chr1_+_40082201_40082235	5.96957	BPTF.p2	AK020498|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK167747|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK004047|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr4_+_140257340_140257464	5.95297	BPTF.p2	NM_173867|Rcc2|108911|regulator of chromosome condensation 2	BC060624|Rcc2|108911|regulator of chromosome condensation 2	AK076040|Rcc2|108911|regulator of chromosome condensation 2	BC086666|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr11_-_106992869_106992950	5.90947	BPTF.p2	BC037661|Bptf|207165|bromodomain PHD finger transcription factor	BC046973|Bptf|207165|bromodomain PHD finger transcription factor
mm9_v1_chr11_+_101309725_101309821	5.90023	BPTF.p2	AK131884|Ifi35|70110|interferon-induced protein 35	NM_027320|Ifi35|70110|interferon-induced protein 35	AK008161|Ifi35|70110|interferon-induced protein 35	BC008158|Ifi35|70110|interferon-induced protein 35
mm9_v1_chr15_-_103140868_103140877	5.89835	BPTF.p2	AF272948|Gpr84|80910|G protein-coupled receptor 84	NM_030720|Gpr84|80910|G protein-coupled receptor 84	BC023249|Gpr84|80910|G protein-coupled receptor 84
mm9_v1_chr17_-_35325354_35325410	5.881	BPTF.p2	U72643|Lst1|16988|leukocyte specific transcript 1	U72644|Lst1|16988|leukocyte specific transcript 1	AF000428|Lst1|16988|leukocyte specific transcript 1	BC086881|Lst1|16988|leukocyte specific transcript 1	M18187|Lst1|16988|leukocyte specific transcript 1	NM_010734|Lst1|16988|leukocyte specific transcript 1	AF000427|Lst1|16988|leukocyte specific transcript 1
mm9_v1_chr1_-_194956399_194956457	5.86502	BPTF.p2	AK088756|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK147251|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK052355|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	NM_145415|Diexf|215193|digestive organ expansion factor homolog (zebrafish)
mm9_v1_chr18_+_36953553_36953593	5.85587	BPTF.p2	BC024881|Zmat2|66492|zinc finger, matrin type 2	NM_025594|Zmat2|66492|zinc finger, matrin type 2	AK012091|Zmat2|66492|zinc finger, matrin type 2	BC089501|Zmat2|66492|zinc finger, matrin type 2	AK008717|Zmat2|66492|zinc finger, matrin type 2
mm9_v1_chr2_-_156960826_156961007	5.82706	BPTF.p2	AK128954|Samhd1|56045|SAM domain and HD domain, 1	AK149865|Samhd1|56045|SAM domain and HD domain, 1	AK151335|Samhd1|56045|SAM domain and HD domain, 1	AK153390|Samhd1|56045|SAM domain and HD domain, 1	AK054490|Samhd1|56045|SAM domain and HD domain, 1	AK170688|Samhd1|56045|SAM domain and HD domain, 1	AK171565|Samhd1|56045|SAM domain and HD domain, 1	BC067198|Samhd1|56045|SAM domain and HD domain, 1	U15635|Samhd1|56045|SAM domain and HD domain, 1	BC012721|Samhd1|56045|SAM domain and HD domain, 1	AK078936|Samhd1|56045|SAM domain and HD domain, 1	NM_001139520|Samhd1|56045|SAM domain and HD domain, 1	NM_018851|Samhd1|56045|SAM domain and HD domain, 1
mm9_v1_chrX_-_71618617_71618655	5.81948	BPTF.p2	BC023050|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	AK041958|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr7_-_3820753_3820811	5.81366	BPTF.p2	AK137448|Gm10693|675749|predicted pseudogene 10693
mm9_v1_chr16_-_92605804_92605880	5.80871	BPTF.p2	AK153274|Runx1|12394|runt related transcription factor 1
mm9_v1_chr7_+_25155455_25155523	5.79077	BPTF.p2	AB128930|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AF072884|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK085752|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr14_-_59960166_59960211	5.78839	BPTF.p2	EU155108|Gm4902|236451|predicted gene 4902	NM_001164327|Gm4902|236451|predicted gene 4902
mm9_v1_chr8_-_112102961_112102972	5.75426	BPTF.p2	AK159676|Hp|15439|haptoglobin	S67972|Hp|15439|haptoglobin	AK150430|Hp|15439|haptoglobin	AK150830|Hp|15439|haptoglobin	AK152295|Hp|15439|haptoglobin	AK152698|Hp|15439|haptoglobin
mm9_v1_chr8_-_112103065_112103072	5.75145	BPTF.p2	NM_017370|Hp|15439|haptoglobin
mm9_v1_chr5_+_91201521_91201531	5.73735	BPTF.p2	BC061111|Pf4|56744|platelet factor 4
mm9_v1_chr10_+_79422870_79422988	5.71726	BPTF.p2	AK087505|Wdr18|216156|WD repeat domain 18	AK133716|Wdr18|216156|WD repeat domain 18	BC095984|Wdr18|216156|WD repeat domain 18	NM_175450|Wdr18|216156|WD repeat domain 18	AK032251|Wdr18|216156|WD repeat domain 18	AK050106|Wdr18|216156|WD repeat domain 18	AK160713|Wdr18|216156|WD repeat domain 18	AK163465|Wdr18|216156|WD repeat domain 18	AK166113|Wdr18|216156|WD repeat domain 18	AK168691|Wdr18|216156|WD repeat domain 18	AK082695|Wdr18|216156|WD repeat domain 18
mm9_v1_chr9_-_56995928_56996111	5.68608	BPTF.p2	AK155405|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	AK013322|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC043297|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC034873|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)
mm9_v1_chr12_-_70329149_70329198	5.68568	BPTF.p2	AF036898|Pole2|18974|polymerase (DNA directed), epsilon 2 (p59 subunit)	AK011194|Pole2|18974|polymerase (DNA directed), epsilon 2 (p59 subunit)	BC052170|Pole2|18974|polymerase (DNA directed), epsilon 2 (p59 subunit)	BC063772|Pole2|18974|polymerase (DNA directed), epsilon 2 (p59 subunit)	AK172024|Pole2|18974|polymerase (DNA directed), epsilon 2 (p59 subunit)	AK077592|Pole2|18974|polymerase (DNA directed), epsilon 2 (p59 subunit)	NM_011133|Pole2|18974|polymerase (DNA directed), epsilon 2 (p59 subunit)
mm9_v1_chr17_+_35189798_35189804	5.67414	BPTF.p2	
mm9_v1_chr2_+_71711274_71711402	5.66838	BPTF.p2	AK046805|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK153649|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	NM_172665|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK163553|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC027196|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK028017|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK085215|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC025480|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1
mm9_v1_chr5_-_122714423_122714468	5.66775	BPTF.p2	BC141084|Tctn1|654470|tectonic family member 1	AK085676|Tctn1|654470|tectonic family member 1	AK144772|Tctn1|654470|tectonic family member 1	AK036568|Tctn1|654470|tectonic family member 1	AK138661|Tctn1|654470|tectonic family member 1	DQ278867|Tctn1|654470|tectonic family member 1	NM_001039153|Tctn1|654470|tectonic family member 1
mm9_v1_chr17_+_34282215_34282360	5.65942	BPTF.p2	BC052864|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X62743|H2-DMb1|14999|histocompatibility 2, class II, locus Mb1	AK154923|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	BC141105|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	BC145385|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	BC145386|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	BC171960|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	NM_010388|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	U35332|H2-DMb1|14999|histocompatibility 2, class II, locus Mb1	U35334|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	U35335|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	U35336|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	U35337|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	U35338|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90796|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90797|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90798|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90799|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90800|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90801|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90802|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90803|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90804|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90805|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90806|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90807|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2	X90808|H2-DMb2|15000|histocompatibility 2, class II, locus Mb2
mm9_v1_chr5_-_105411580_105411736	5.64497	BPTF.p2	BC029095|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK037614|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AF324242|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK051880|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK156626|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138773|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138772|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	NM_030239|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK030831|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3
mm9_v1_chr3_-_50247306_50247534	5.63478	BPTF.p2	AK162233|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK170568|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141402|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141408|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AB022345|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766236|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766237|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK165599|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089202|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037742|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK076322|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK163168|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171252|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171327|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089283|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171192|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037490|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	NM_011990|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm9_v1_chr3_+_142223027_142223114	5.60644	BPTF.p2	BC019195|Gbp3|55932|guanylate binding protein 3
mm9_v1_chrX_+_156278399_156278494	5.60212	BPTF.p2	AK028299|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135728|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr5_+_130505154_130505232	5.60156	BPTF.p2	AF118271|Crcp|12909|calcitonin gene-related peptide-receptor component protein	NM_007761|Crcp|12909|calcitonin gene-related peptide-receptor component protein	AK075587|Crcp|12909|calcitonin gene-related peptide-receptor component protein	AF028242|Crcp|12909|calcitonin gene-related peptide-receptor component protein
mm9_v1_chr16_-_92826307_92826318	5.58826	BPTF.p2	AK165307|Runx1|12394|runt related transcription factor 1	AK145098|Runx1|12394|runt related transcription factor 1	NM_001111021|Runx1|12394|runt related transcription factor 1	NM_001111022|Runx1|12394|runt related transcription factor 1	AK040240|Runx1|12394|runt related transcription factor 1
mm9_v1_chr7_-_3671918_3672003	5.57402	BPTF.p2	U96690|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148879|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U83172|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148878|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	BC028756|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148880|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK161081|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK142375|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK170618|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK152232|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK153116|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK170720|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96692|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK165255|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011095|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96693|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
mm9_v1_chr15_-_76470334_76470408	5.53435	BPTF.p2	BC066068|Tonsl|72749|tonsoku-like, DNA repair protein	AK139173|Tonsl|72749|tonsoku-like, DNA repair protein	NM_183091|Tonsl|72749|tonsoku-like, DNA repair protein
mm9_v1_chr18_+_21103125_21103125	5.52909	BPTF.p2	AK050395|Rnf125|67664|ring finger protein 125	NM_026301|Rnf125|67664|ring finger protein 125
mm9_v1_chr2_+_172847371_172847458	5.52533	BPTF.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr2_-_28771940_28771959	5.50673	BPTF.p2	NM_019446|Barhl1|54422|BarH-like 1 (Drosophila)	AB043980|Barhl1|54422|BarH-like 1 (Drosophila)	BC055731|Barhl1|54422|BarH-like 1 (Drosophila)	NM_001164186|Barhl1|54422|BarH-like 1 (Drosophila)
mm9_v1_chr14_-_64147067_64147107	5.49951	BPTF.p2	AF073881|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr3_+_90407688_90407708	5.49484	BPTF.p2	AK160522|S100a4|20198|S100 calcium binding protein A4	D00208|S100a4|20198|S100 calcium binding protein A4	NM_011311|S100a4|20198|S100 calcium binding protein A4	AK003065|S100a4|20198|S100 calcium binding protein A4
mm9_v1_chr13_-_51829951_51830128	5.44384	BPTF.p2	AK150911|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
mm9_v1_chr14_+_105658112_105658180	5.4237	BPTF.p2	BC117075|Ndfip2|76273|Nedd4 family interacting protein 2	BC119092|Ndfip2|76273|Nedd4 family interacting protein 2	AK013250|Ndfip2|76273|Nedd4 family interacting protein 2	AF411608|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr2_-_169968174_169968177	5.41239	BPTF.p2	AK139547|Zfp217|228913|zinc finger protein 217	NM_001159683|Zfp217|228913|zinc finger protein 217	AK163381|Zfp217|228913|zinc finger protein 217
mm9_v1_chr9_+_64809499_64809621	5.40922	BPTF.p2	AK168222|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene
mm9_v1_chr4_-_116855158_116855228	5.39407	BPTF.p2	AK150222|Kif2c|73804|kinesin family member 2C	AK088047|Kif2c|73804|kinesin family member 2C	BC006841|Kif2c|73804|kinesin family member 2C	AK015046|Kif2c|73804|kinesin family member 2C	NM_134471|Kif2c|73804|kinesin family member 2C
mm9_v1_chr5_-_123438517_123438541	5.36971	BPTF.p2	NM_001005866|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr1_-_33726582_33726638	5.364	BPTF.p2	D17385|Prim2|19076|DNA primase, p58 subunit	AK153970|Prim2|19076|DNA primase, p58 subunit	BC019500|Prim2|19076|DNA primase, p58 subunit	D13545|Prim2|19076|DNA primase, p58 subunit	NM_008922|Prim2|19076|DNA primase, p58 subunit	AK076095|Prim2|19076|DNA primase, p58 subunit	AK077760|Prim2|19076|DNA primase, p58 subunit	AK168246|Prim2|19076|DNA primase, p58 subunit
mm9_v1_chr1_-_197002841_197002908	5.36146	BPTF.p2	BC109344|Cr2|12902|complement receptor 2	BC109345|Cr2|12902|complement receptor 2	AK003072|Cr2|12902|complement receptor 2	NM_007758|Cr2|12902|complement receptor 2
mm9_v1_chr2_-_25483295_25483445	5.35068	BPTF.p2	AB222271|Fcna|14133|ficolin A	CT010383|Fcna|14133|ficolin A	AB007813|Fcna|14133|ficolin A	BC019180|Fcna|14133|ficolin A	AK138752|Fcna|14133|ficolin A
mm9_v1_chr5_-_113325381_113325386	5.32916	BPTF.p2	AK085912|Myo18b|74376|myosin XVIIIb	NM_028901|Myo18b|74376|myosin XVIIIb
mm9_v1_chr6_+_29479250_29479325	5.32805	BPTF.p2	AK156220|Irf5|27056|interferon regulatory factor 5
mm9_v1_chr9_+_77899730_77899780	5.32616	BPTF.p2	D88612|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	U59876|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	BC066866|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	NM_008103|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	AK142574|Gcm1|14531|glial cells missing homolog 1 (Drosophila)
mm9_v1_chr10_-_92773778_92773948	5.32596	BPTF.p2	Z32815|Elk3|13713|ELK3, member of ETS oncogene family	L19953|Elk3|13713|ELK3, member of ETS oncogene family	BC005686|Elk3|13713|ELK3, member of ETS oncogene family	NM_013508|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr11_+_100720664_100720716	5.31916	BPTF.p2	NM_011488|Stat5a|20850|signal transducer and activator of transcription 5A	BC013274|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr7_-_3796651_3796654	5.31141	BPTF.p2	AK140776|Pira2|18725|paired-Ig-like receptor A2	AK137475|Pira2|18725|paired-Ig-like receptor A2	AK172046|Pira2|18725|paired-Ig-like receptor A2	NM_011089|Pira2|18725|paired-Ig-like receptor A2
mm9_v1_chr1_-_184447549_184447745	5.29467	BPTF.p2	AF015038|Capn2|12334|calpain 2	AK150695|Capn2|12334|calpain 2	AK152094|Capn2|12334|calpain 2	AK152790|Capn2|12334|calpain 2	AK152994|Capn2|12334|calpain 2	AK052141|Capn2|12334|calpain 2	BC054726|Capn2|12334|calpain 2	NM_009794|Capn2|12334|calpain 2	AK154855|Capn2|12334|calpain 2	D38117|Capn2|12334|calpain 2	AK053832|Capn2|12334|calpain 2
mm9_v1_chr4_-_131909584_131909605	5.29359	BPTF.p2	BC100513|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr3_+_99057679_99057682	5.288	BPTF.p2	AK132578|Tbx15|21384|T-box 15	NM_009323|Tbx15|21384|T-box 15
mm9_v1_chr10_-_127986030_127986175	5.28764	BPTF.p2	U93862|Rpl41|67945|ribosomal protein L41	BC099380|Rpl41|67945|ribosomal protein L41	BC081450|Rpl41|67945|ribosomal protein L41	BC083066|Rpl41|67945|ribosomal protein L41	BC092010|Rpl41|67945|ribosomal protein L41	AK019178|Rpl41|67945|ribosomal protein L41	AK010564|Rpl41|67945|ribosomal protein L41	AK002503|Rpl41|67945|ribosomal protein L41	AK008901|Rpl41|67945|ribosomal protein L41	AK010585|Rpl41|67945|ribosomal protein L41	AK012252|Rpl41|67945|ribosomal protein L41	AK012487|Rpl41|67945|ribosomal protein L41	AK028126|Rpl41|67945|ribosomal protein L41	AK028263|Rpl41|67945|ribosomal protein L41	AK168485|Rpl41|67945|ribosomal protein L41	AK168653|Rpl41|67945|ribosomal protein L41	AK168719|Rpl41|67945|ribosomal protein L41	BC089572|Rpl41|67945|ribosomal protein L41	AK012476|Rpl41|67945|ribosomal protein L41	AK151566|Rpl41|67945|ribosomal protein L41	AK007874|Rpl41|67945|ribosomal protein L41	AK009548|Rpl41|67945|ribosomal protein L41	AK010246|Rpl41|67945|ribosomal protein L41	AK010317|Rpl41|67945|ribosomal protein L41	AK010482|Rpl41|67945|ribosomal protein L41	AK010509|Rpl41|67945|ribosomal protein L41	AK010583|Rpl41|67945|ribosomal protein L41	AK013324|Rpl41|67945|ribosomal protein L41	AK019049|Rpl41|67945|ribosomal protein L41	AK150502|Rpl41|67945|ribosomal protein L41	AK160588|Rpl41|67945|ribosomal protein L41	AK168107|Rpl41|67945|ribosomal protein L41	BC089573|Rpl41|67945|ribosomal protein L41	BC100592|Rpl41|67945|ribosomal protein L41	BC145727|Rpl41|67945|ribosomal protein L41	BC145729|Rpl41|67945|ribosomal protein L41	AK012450|Rpl41|67945|ribosomal protein L41	AK028231|Rpl41|67945|ribosomal protein L41
mm9_v1_chr11_+_95198329_95198359	5.28698	BPTF.p2	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr10_+_82321923_82322011	5.28582	BPTF.p2	AB027565|Txnrd1|50493|thioredoxin reductase 1	AK151927|Txnrd1|50493|thioredoxin reductase 1	NM_001042513|Txnrd1|50493|thioredoxin reductase 1	NM_015762|Txnrd1|50493|thioredoxin reductase 1	AK146125|Txnrd1|50493|thioredoxin reductase 1	AK149625|Txnrd1|50493|thioredoxin reductase 1	AK168356|Txnrd1|50493|thioredoxin reductase 1	AK011902|Txnrd1|50493|thioredoxin reductase 1	AK186760|Txnrd1|50493|thioredoxin reductase 1	AK186897|Txnrd1|50493|thioredoxin reductase 1	AK194169|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr10_-_80962400_80962451	5.28451	BPTF.p2	AK075854|S1pr4|13611|sphingosine-1-phosphate receptor 4	AK154242|S1pr4|13611|sphingosine-1-phosphate receptor 4	BC107000|S1pr4|13611|sphingosine-1-phosphate receptor 4
mm9_v1_chr19_-_41289045_41289143	5.26713	BPTF.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr1_-_180267841_180267909	5.26271	BPTF.p2	AF073992|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159956|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK037517|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK168657|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK029944|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159084|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr1_-_141677744_141677835	5.25634	BPTF.p2	AJ871401|EG214403|214403|predicted gene, EG214403	AJ871402|EG214403|214403|predicted gene, EG214403	BC141136|EG214403|214403|predicted gene, EG214403	BC145444|EG214403|214403|predicted gene, EG214403	M29009|EG214403|214403|predicted gene, EG214403	NM_001029977|EG214403|214403|predicted gene, EG214403	NM_001160303|EG214403|214403|predicted gene, EG214403	NM_001160304|EG214403|214403|predicted gene, EG214403
mm9_v1_chrX_-_99352341_99352429	5.25325	BPTF.p2	AK045113|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK029015|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	BC037660|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK084617|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK084618|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AY172688|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	NM_146235|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like
mm9_v1_chr13_-_114408704_114408818	5.24258	BPTF.p2	AK052343|Snx18|170625|sorting nexin 18	BC137801|Snx18|170625|sorting nexin 18	BC145951|Snx18|170625|sorting nexin 18	AF408408|Snx18|170625|sorting nexin 18	AK155955|Snx18|170625|sorting nexin 18	AK143645|Snx18|170625|sorting nexin 18	BC063089|Snx18|170625|sorting nexin 18	NM_130796|Snx18|170625|sorting nexin 18
mm9_v1_chr2_-_73291933_73291985	5.23783	BPTF.p2	AK156547|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr8_+_34807688_34807718	5.2374	BPTF.p2	AK027984|Gsr|14782|glutathione reductase
mm9_v1_chr5_+_129106980_129107017	5.23267	BPTF.p2	AY509002|Fzd10|93897|frizzled homolog 10 (Drosophila)	NM_175284|Fzd10|93897|frizzled homolog 10 (Drosophila)	BC117759|Fzd10|93897|frizzled homolog 10 (Drosophila)
mm9_v1_chrX_+_39502588_39502859	5.20419	BPTF.p2	NM_001077712|Stag2|20843|stromal antigen 2	AK050415|Stag2|20843|stromal antigen 2	AK077318|Stag2|20843|stromal antigen 2	AK020968|Stag2|20843|stromal antigen 2	AK020316|Stag2|20843|stromal antigen 2
mm9_v1_chr7_-_4014717_4014817	5.18088	BPTF.p2	AF491829|Lair1|52855|leukocyte-associated Ig-like receptor 1	AF491830|Lair1|52855|leukocyte-associated Ig-like receptor 1	AF491831|Lair1|52855|leukocyte-associated Ig-like receptor 1	AF479685|Lair1|52855|leukocyte-associated Ig-like receptor 1	AK043664|Lair1|52855|leukocyte-associated Ig-like receptor 1	AY392763|Lair1|52855|leukocyte-associated Ig-like receptor 1	AY392764|Lair1|52855|leukocyte-associated Ig-like receptor 1	AY392765|Lair1|52855|leukocyte-associated Ig-like receptor 1	AY392766|Lair1|52855|leukocyte-associated Ig-like receptor 1	AK050281|Lair1|52855|leukocyte-associated Ig-like receptor 1	AK054158|Lair1|52855|leukocyte-associated Ig-like receptor 1	AK038574|Lair1|52855|leukocyte-associated Ig-like receptor 1	BC025901|Lair1|52855|leukocyte-associated Ig-like receptor 1	AK044465|Lair1|52855|leukocyte-associated Ig-like receptor 1	AK033472|Lair1|52855|leukocyte-associated Ig-like receptor 1	NM_001113474|Lair1|52855|leukocyte-associated Ig-like receptor 1	NM_178611|Lair1|52855|leukocyte-associated Ig-like receptor 1
mm9_v1_chr19_-_41069024_41069024	5.1637	BPTF.p2	NM_008528|Blnk|17060|B-cell linker	Y17159|Blnk|17060|B-cell linker
mm9_v1_chr4_-_19447698_19447753	5.16332	BPTF.p2	BC053980|Cpne3|70568|copine III
mm9_v1_chr3_+_89904553_89904598	5.1537	BPTF.p2	X73607|Tpm3|59069|tropomyosin 3, gamma
mm9_v1_chr19_+_3935169_3935313	5.15095	BPTF.p2	NM_001161428|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	NM_019449|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	BC018388|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK030488|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK039526|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK165060|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK155556|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK162535|Unc93b1|54445|unc-93 homolog B1 (C. elegans)
mm9_v1_chr2_+_136717938_136718024	5.14297	BPTF.p2	AK050487|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	AK008687|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_028834|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	BC071202|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr13_-_49748055_49748114	5.12873	BPTF.p2	AK014919|Cenpp|66336|centromere protein P	BC147207|Cenpp|66336|centromere protein P	BC147208|Cenpp|66336|centromere protein P	AK012863|Cenpp|66336|centromere protein P	NM_025495|Cenpp|66336|centromere protein P	AK006234|Cenpp|66336|centromere protein P
mm9_v1_chr9_-_21935019_21935041	5.08309	BPTF.p2	NM_007388|Acp5|11433|acid phosphatase 5, tartrate resistant
mm9_v1_chr10_-_68815606_68815685	5.07628	BPTF.p2	BC024396|Cdk1|12534|cyclin-dependent kinase 1	AK168054|Cdk1|12534|cyclin-dependent kinase 1	AK030231|Cdk1|12534|cyclin-dependent kinase 1	NM_007659|Cdk1|12534|cyclin-dependent kinase 1	AK135516|Cdk1|12534|cyclin-dependent kinase 1	U58633|Cdk1|12534|cyclin-dependent kinase 1	AK051859|Cdk1|12534|cyclin-dependent kinase 1
mm9_v1_chr8_-_73796358_73796488	5.04653	BPTF.p2	AK161850|Haus8|76478|4HAUS augmin-like complex, subunit 8	NM_001163042|Haus8|76478|4HAUS augmin-like complex, subunit 8	NM_029621|Haus8|76478|4HAUS augmin-like complex, subunit 8
mm9_v1_chr16_+_23224804_23224864	5.04021	BPTF.p2	BC092222|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	NM_145933|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr1_+_21339757_21339831	5.03183	BPTF.p2	NM_183322|Khdc1a|368204|KH domain containing 1A	AK136166|Khdc1a|368204|KH domain containing 1A
mm9_v1_chr17_-_32557916_32557924	5.02566	BPTF.p2	AF149837|Pglyrp2|57757|peptidoglycan recognition protein 2	AF149838|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315578|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315584|Pglyrp2|57757|peptidoglycan recognition protein 2	AF317548|Pglyrp2|57757|peptidoglycan recognition protein 2	AK050019|Pglyrp2|57757|peptidoglycan recognition protein 2	NM_021319|Pglyrp2|57757|peptidoglycan recognition protein 2
mm9_v1_chr6_+_47827535_47827591	5.02206	BPTF.p2	NM_146175|Zfp282|101095|zinc finger protein 282	AK088531|Zfp282|101095|zinc finger protein 282	AK148038|Zfp282|101095|zinc finger protein 282
mm9_v1_chr5_-_92777875_92777914	5.01643	BPTF.p2	AF227743|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M33266|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	NM_021274|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC030067|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC057150|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150380|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK156907|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK172540|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M86829|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK144279|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150765|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151210|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151248|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151415|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151534|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152568|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152814|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK153181|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157130|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157139|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157589|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157678|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK146144|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152234|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr5_-_124928243_124928390	4.99882	BPTF.p2	BC003324|Rilpl2|80291|Rab interacting lysosomal protein-like 2	NM_030259|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK171419|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK150252|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK150123|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK133760|Rilpl2|80291|Rab interacting lysosomal protein-like 2
mm9_v1_chr2_-_167515255_167515321	4.97467	BPTF.p2	AK080983|Tmem189|407243|transmembrane protein 189
mm9_v1_chr4_-_147183894_147183948	4.9568	BPTF.p2	NM_001127189|Gm13157|100041677|predicted gene 13157	AK011687|2610036A22Rik|70190|RIKEN cDNA 2610036A22 gene
mm9_v1_chr6_+_136467388_136467391	4.94595	BPTF.p2	BC060246|Atf7ip|54343|activating transcription factor 7 interacting protein
mm9_v1_chr17_-_46290450_46290465	4.94218	BPTF.p2	AK004224|Mad2l1bp|66591|MAD2L1 binding protein	AK007974|Mad2l1bp|66591|MAD2L1 binding protein	BC005768|Mad2l1bp|66591|MAD2L1 binding protein	AK220322|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr9_-_21564742_21564759	4.93807	BPTF.p2	AK153185|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK011728|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK167877|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr4_+_44313865_44313931	4.91824	BPTF.p2	AK167457|Melk|17279|maternal embryonic leucine zipper kinase	AK145316|Melk|17279|maternal embryonic leucine zipper kinase	AK208560|Melk|17279|maternal embryonic leucine zipper kinase
mm9_v1_chrX_-_20639111_20639168	4.90157	BPTF.p2	AK155039|Zfp182|319535|zinc finger protein 182	BC063066|Zfp182|319535|zinc finger protein 182	AK045698|Zfp182|319535|zinc finger protein 182	NM_001013387|Zfp182|319535|zinc finger protein 182	NM_001111076|Zfp182|319535|zinc finger protein 182	AK043973|Zfp182|319535|zinc finger protein 182
mm9_v1_chr2_-_154196611_154196692	4.86255	BPTF.p2	BC025132|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr6_+_54839147_54839273	4.86031	BPTF.p2	AK078666|Znrf2|387524|zinc and ring finger 2
mm9_v1_chr5_+_130505237_130505255	4.85433	BPTF.p2	BC012676|Crcp|12909|calcitonin gene-related peptide-receptor component protein
mm9_v1_chr1_-_88253690_88253764	4.84749	BPTF.p2	AK050958|Ncl|17975|nucleolin
mm9_v1_chr9_+_108957402_108957503	4.81683	BPTF.p2	AK081060|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK020877|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK018291|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	NM_026381|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC057089|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC017600|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chr14_+_56384798_56384867	4.81545	BPTF.p2	AK155181|Ltb4r1|16995|leukotriene B4 receptor 1	NM_008519|Ltb4r1|16995|leukotriene B4 receptor 1	AF044030|Ltb4r1|16995|leukotriene B4 receptor 1	AK010895|Ltb4r1|16995|leukotriene B4 receptor 1	AF110104|Ltb4r1|16995|leukotriene B4 receptor 1	BC064063|Ltb4r1|16995|leukotriene B4 receptor 1
mm9_v1_chr11_+_87895626_87895848	4.81449	BPTF.p2	AK079148|Vezf1|22344|vascular endothelial zinc finger 1	AK018086|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr7_-_121419535_121419643	4.80768	BPTF.p2	AF060088|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	BC005762|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK135326|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK167689|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK137054|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK161611|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AJ272021|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK162277|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK162439|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AJ272019|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK144784|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK088673|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	NM_011965|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1
mm9_v1_chr11_-_53113682_53113812	4.79268	BPTF.p2	D85904|Hspa4|15525|heat shock protein 4
mm9_v1_chr9_-_70269326_70269397	4.76359	BPTF.p2	AK013312|Ccnb2|12442|cyclin B2	X66032|Ccnb2|12442|cyclin B2	AK076122|Ccnb2|12442|cyclin B2	NM_007630|Ccnb2|12442|cyclin B2
mm9_v1_chr8_+_119983566_119983649	4.76301	BPTF.p2	AK049761|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr15_+_102289600_102289666	4.76297	BPTF.p2	NM_001170911|Prr13|66151|proline rich 13	NM_025385|Prr13|66151|proline rich 13	AK003850|Prr13|66151|proline rich 13	AK002430|Prr13|66151|proline rich 13	AK008894|Prr13|66151|proline rich 13	AK154583|Prr13|66151|proline rich 13	BC016234|Prr13|66151|proline rich 13	AK181585|Prr13|66151|proline rich 13
mm9_v1_chr2_+_92025639_92025639	4.75277	BPTF.p2	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr5_+_8798145_8798190	4.75185	BPTF.p2	AK030328|Abcb1b|18669|ATP-binding cassette, sub-family B (MDR/TAP), member 1B	NM_011075|Abcb1b|18669|ATP-binding cassette, sub-family B (MDR/TAP), member 1B	M14757|Abcb1b|18669|ATP-binding cassette, sub-family B (MDR/TAP), member 1B	BC141363|Abcb1b|18669|ATP-binding cassette, sub-family B (MDR/TAP), member 1B	BC150811|Abcb1b|18669|ATP-binding cassette, sub-family B (MDR/TAP), member 1B
mm9_v1_chr19_-_7093919_7093958	4.7518	BPTF.p2	BC066803|Fermt3|108101|fermitin family homolog 3 (Drosophila)	BC032204|Fermt3|108101|fermitin family homolog 3 (Drosophila)	AK142912|Fermt3|108101|fermitin family homolog 3 (Drosophila)	NM_153795|Fermt3|108101|fermitin family homolog 3 (Drosophila)
mm9_v1_chr17_+_37006518_37006546	4.72699	BPTF.p2	NM_011280|Trim10|19824|tripartite motif-containing 10	AK011082|Trim10|19824|tripartite motif-containing 10	AF134811|Trim10|19824|tripartite motif-containing 10	BC051632|Trim10|19824|tripartite motif-containing 10	AF220121|Trim10|19824|tripartite motif-containing 10
mm9_v1_chr16_-_36666078_36666195	4.72686	BPTF.p2	AF065897|Cd86|12524|CD86 antigen	AF065898|Cd86|12524|CD86 antigen	AF065899|Cd86|12524|CD86 antigen	AF065900|Cd86|12524|CD86 antigen	S70108|Cd86|12524|CD86 antigen	BC013807|Cd86|12524|CD86 antigen	L25606|Cd86|12524|CD86 antigen	AK079513|Cd86|12524|CD86 antigen	AK155710|Cd86|12524|CD86 antigen	AK170054|Cd86|12524|CD86 antigen	NM_019388|Cd86|12524|CD86 antigen	AK172548|Cd86|12524|CD86 antigen	AK172686|Cd86|12524|CD86 antigen
mm9_v1_chr7_-_31741956_31742036	4.69851	BPTF.p2	AK158906|Usf2|22282|upstream transcription factor 2
mm9_v1_chr14_+_45607785_45607874	4.68977	BPTF.p2	NM_008964|Ptger2|19217|prostaglandin E receptor 2 (subtype EP2)	AK036531|Ptger2|19217|prostaglandin E receptor 2 (subtype EP2)	AK086904|Ptger2|19217|prostaglandin E receptor 2 (subtype EP2)
mm9_v1_chr16_-_35871459_35871582	4.68087	BPTF.p2	AK005563|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK089685|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156483|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156593|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	NM_001039530|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC138874|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC145452|Parp14|547253|poly (ADP-ribose) polymerase family, member 14
mm9_v1_chr6_+_21899978_21900058	4.64605	BPTF.p2	AK146145|Ing3|71777|inhibitor of growth family, member 3	AK030364|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr10_-_12683885_12684038	4.64257	BPTF.p2	AK017897|Stx11|74732|syntaxin 11	AK171040|Stx11|74732|syntaxin 11	AK171663|Stx11|74732|syntaxin 11	AK153408|Stx11|74732|syntaxin 11
mm9_v1_chr1_-_90406613_90406640	4.63884	BPTF.p2	BC139128|Glrp1|14659|glutamine repeat protein 1	BC139129|Glrp1|14659|glutamine repeat protein 1	NM_008132|Glrp1|14659|glutamine repeat protein 1	U46463|Glrp1|14659|glutamine repeat protein 1
mm9_v1_chr10_-_61960613_61960625	4.63134	BPTF.p2	AK087960|Srgn|19073|serglycin
mm9_v1_chr6_-_127075853_127076093	4.63046	BPTF.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr9_-_21564723_21564737	4.61712	BPTF.p2	AK031680|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK075950|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC116238|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC116239|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_026282|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC086683|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC056965|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC098472|Spc24|67629|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr9_+_44143931_44144022	4.61446	BPTF.p2	
mm9_v1_chr19_+_56622750_56622913	4.6096	BPTF.p2	AK033384|Nhlrc2|66866|NHL repeat containing 2	NM_025811|Nhlrc2|66866|NHL repeat containing 2	BC095956|Nhlrc2|66866|NHL repeat containing 2	BC138190|Nhlrc2|66866|NHL repeat containing 2	BC138191|Nhlrc2|66866|NHL repeat containing 2
mm9_v1_chr11_+_87607285_87607285	4.5997	BPTF.p2	NM_010824|Mpo|17523|myeloperoxidase
mm9_v1_chr18_-_77870871_77870990	4.59402	BPTF.p2	AK009215|2310007O11Rik|74177|RIKEN cDNA 2310007O11 gene
mm9_v1_chr6_+_52263491_52263491	4.59231	BPTF.p2	NM_007966|Evx1|14028|even skipped homeotic gene 1 homolog	X54239|Evx1|14028|even skipped homeotic gene 1 homolog
mm9_v1_chr11_+_53583927_53584130	4.56205	BPTF.p2	NM_001159396|Irf1|16362|interferon regulatory factor 1	BC003821|Irf1|16362|interferon regulatory factor 1
mm9_v1_chr5_-_101148612_101148765	4.54261	BPTF.p2	AY151051|Hpse|15442|heparanase	AY077467|Hpse|15442|heparanase	AF359507|Hpse|15442|heparanase	BC138782|Hpse|15442|heparanase	BC138784|Hpse|15442|heparanase	AK040471|Hpse|15442|heparanase	AK154628|Hpse|15442|heparanase	NM_152803|Hpse|15442|heparanase	AK087283|Hpse|15442|heparanase
mm9_v1_chr6_-_122552269_122552466	4.53791	BPTF.p2	AK146427|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK151799|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK166412|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK165209|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC003792|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001134391|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_031159|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U22262|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U22263|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
mm9_v1_chr7_-_147178381_147178450	4.53599	BPTF.p2	AK150411|Adam8|11501|a disintegrin and metallopeptidase domain 8	NM_007403|Adam8|11501|a disintegrin and metallopeptidase domain 8	X13335|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK155772|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK089086|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK171060|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK152769|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK153065|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK160041|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK155912|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK152675|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK171022|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK089169|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK170019|Adam8|11501|a disintegrin and metallopeptidase domain 8	BC025584|Adam8|11501|a disintegrin and metallopeptidase domain 8
mm9_v1_chr15_+_55388962_55389149	4.53431	BPTF.p2	BC052197|Mtbp|105837|Mdm2, transformed 3T3 cell double minute p53 binding protein	NM_001168250|Mtbp|105837|Mdm2, transformed 3T3 cell double minute p53 binding protein	NM_134092|Mtbp|105837|Mdm2, transformed 3T3 cell double minute p53 binding protein	AJ278508|Mtbp|105837|Mdm2, transformed 3T3 cell double minute p53 binding protein	AK133855|Mtbp|105837|Mdm2, transformed 3T3 cell double minute p53 binding protein	AK080036|Mtbp|105837|Mdm2, transformed 3T3 cell double minute p53 binding protein	AK088549|Mtbp|105837|Mdm2, transformed 3T3 cell double minute p53 binding protein
mm9_v1_chr13_+_105077914_105078054	4.52564	BPTF.p2	AK030315|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	AK044528|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	NM_001081020|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	BC172116|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm9_v1_chrX_-_71618556_71618610	4.5161	BPTF.p2	EU599043|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599044|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599045|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	BC027440|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	NM_145406|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr12_+_85393093_85393100	4.48405	BPTF.p2	AY563098|Acot3|171281|acyl-CoA thioesterase 3	AY563097|Acot3|171281|acyl-CoA thioesterase 3	NM_134246|Acot3|171281|acyl-CoA thioesterase 3
mm9_v1_chr8_+_90668448_90668453	4.4787	BPTF.p2	BC030373|Heatr3|234549|HEAT repeat containing 3
mm9_v1_chr1_+_60803231_60803317	4.45943	BPTF.p2	NM_007642|Cd28|12487|CD28 antigen	AK041322|Cd28|12487|CD28 antigen	M34563|Cd28|12487|CD28 antigen	AK088021|Cd28|12487|CD28 antigen	AK030812|Cd28|12487|CD28 antigen	BC064058|Cd28|12487|CD28 antigen
mm9_v1_chr5_+_91201538_91201542	4.44894	BPTF.p2	AB017491|Pf4|56744|platelet factor 4
mm9_v1_chr11_+_62388079_62388082	4.44682	BPTF.p2	AK089004|Trpv2|22368|transient receptor potential cation channel, subfamily V, member 2	AK089502|Trpv2|22368|transient receptor potential cation channel, subfamily V, member 2
mm9_v1_chr16_-_4077714_4077843	4.40578	BPTF.p2	AK188521|Trap1|68015|TNF receptor-associated protein 1	BC006864|Trap1|68015|TNF receptor-associated protein 1	BC006685|Trap1|68015|TNF receptor-associated protein 1	AK002409|Trap1|68015|TNF receptor-associated protein 1	AK088471|Trap1|68015|TNF receptor-associated protein 1	AK162067|Trap1|68015|TNF receptor-associated protein 1	AK167181|Trap1|68015|TNF receptor-associated protein 1	BC022912|Trap1|68015|TNF receptor-associated protein 1	AK010341|Trap1|68015|TNF receptor-associated protein 1	NM_026508|Trap1|68015|TNF receptor-associated protein 1	AK143494|Trap1|68015|TNF receptor-associated protein 1
mm9_v1_chr2_+_103810274_103810481	4.38887	BPTF.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chr13_-_37142112_37142112	4.38823	BPTF.p2	AK030914|F13a1|74145|coagulation factor XIII, A1 subunit	NM_001166391|F13a1|74145|coagulation factor XIII, A1 subunit
mm9_v1_chr11_-_54601133_54601161	4.38737	BPTF.p2	BC034079|Cdc42se2|72729|CDC42 small effector 2	AK088090|Cdc42se2|72729|CDC42 small effector 2	AK090381|Cdc42se2|72729|CDC42 small effector 2	AK012983|Cdc42se2|72729|CDC42 small effector 2	AK039301|Cdc42se2|72729|CDC42 small effector 2	AK135775|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr13_-_105018845_105018951	4.3742	BPTF.p2	AK162956|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK050581|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK028532|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	BC119282|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	BC119310|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK043316|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	NM_172807|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1	AK039698|Ppwd1|238831|peptidylprolyl isomerase domain and WD repeat containing 1
mm9_v1_chr18_+_76219111_76219147	4.36451	BPTF.p2	BC018187|Zbtb7c|207259|zinc finger and BTB domain containing 7C	AK156372|Zbtb7c|207259|zinc finger and BTB domain containing 7C
mm9_v1_chr13_-_91363560_91363583	4.35738	BPTF.p2	AK077333|Atg10|66795|autophagy-related 10 (yeast)	AK009076|Atg10|66795|autophagy-related 10 (yeast)	AK017355|Atg10|66795|autophagy-related 10 (yeast)
mm9_v1_chr17_-_37095420_37095443	4.34518	BPTF.p2	AK005976|Znrd1|66136|zinc ribbon domain containing, 1	AK019152|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr17_+_35403130_35403196	4.33874	BPTF.p2	K01446|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr11_-_53113856_53113893	4.32502	BPTF.p2	BC003950|Hspa4|15525|heat shock protein 4	BC003770|Hspa4|15525|heat shock protein 4
mm9_v1_chr4_-_46417054_46417104	4.31999	BPTF.p2	AF269248|Hemgn|93966|hemogen	NM_053149|Hemgn|93966|hemogen	AK171906|Hemgn|93966|hemogen
mm9_v1_chr6_+_129130632_129130672	4.27371	BPTF.p2	AY320031|Clec2d|93694|C-type lectin domain family 2, member d	AF321553|Clec2d|93694|C-type lectin domain family 2, member d	NM_053109|Clec2d|93694|C-type lectin domain family 2, member d	AF350409|Clec2d|93694|C-type lectin domain family 2, member d	BC106776|Clec2d|93694|C-type lectin domain family 2, member d
mm9_v1_chr14_-_59916342_59916362	4.27093	BPTF.p2	BC116758|Phf11|219131|PHD finger protein 11	BC116760|Phf11|219131|PHD finger protein 11	EU155109|Phf11|219131|PHD finger protein 11	AK077176|Phf11|219131|PHD finger protein 11	NM_172603|Phf11|219131|PHD finger protein 11
mm9_v1_chr8_+_72332573_72332679	4.26244	BPTF.p2	AK043883|Gmip|78816|Gem-interacting protein	BC057037|Gmip|78816|Gem-interacting protein	NM_198101|Gmip|78816|Gem-interacting protein	AK082337|Gmip|78816|Gem-interacting protein	AK172438|Gmip|78816|Gem-interacting protein	BC060628|Gmip|78816|Gem-interacting protein	AK137177|Gmip|78816|Gem-interacting protein	AK052221|Gmip|78816|Gem-interacting protein
mm9_v1_chr7_-_26506741_26506878	4.24057	BPTF.p2	
mm9_v1_chr10_-_18506598_18506598	4.23719	BPTF.p2	AK030207|Gm4922|237300|predicted gene 4922	NM_177706|Gm4922|237300|predicted gene 4922
mm9_v1_chrX_+_109424956_109425024	4.23551	BPTF.p2	AK028953|Apool|68117|apolipoprotein O-like	AK079141|Apool|68117|apolipoprotein O-like	AK012398|Apool|68117|apolipoprotein O-like	AK012804|Apool|68117|apolipoprotein O-like	AK020156|Apool|68117|apolipoprotein O-like	AK088869|Apool|68117|apolipoprotein O-like	AK086522|Apool|68117|apolipoprotein O-like	BC024334|Apool|68117|apolipoprotein O-like	NM_026565|Apool|68117|apolipoprotein O-like
mm9_v1_chr3_+_99057703_99057793	4.22849	BPTF.p2	AY662679|Tbx15|21384|T-box 15	AF041822|Tbx15|21384|T-box 15
mm9_v1_chr1_-_180267759_180267838	4.20441	BPTF.p2	BC018353|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr4_-_150421459_150421590	4.19919	BPTF.p2	
mm9_v1_chr12_-_86644527_86644534	4.19183	BPTF.p2	AK052182|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9
mm9_v1_chr5_-_31950177_31950254	4.18395	BPTF.p2	AK214115|Rbks|71336|ribokinase
mm9_v1_chr11_-_54601163_54601250	4.18069	BPTF.p2	AK145931|Cdc42se2|72729|CDC42 small effector 2	AK160934|Cdc42se2|72729|CDC42 small effector 2	NM_178626|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr9_+_108462759_108462899	4.17547	BPTF.p2	AK169129|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK169788|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK146362|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151706|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK166667|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M33934|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK002676|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK011777|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK143505|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK150713|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151233|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK152691|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK160569|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK159822|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC052671|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC010314|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	NM_011830|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M98333|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2
mm9_v1_chr12_-_81213930_81214002	4.16851	BPTF.p2	M58566|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC037998|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC016621|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK077855|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK021295|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK036950|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK051035|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	NM_007564|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1
mm9_v1_chr2_-_51828671_51828727	4.16153	BPTF.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr9_-_58097422_58097566	4.16146	BPTF.p2	AK193824|Pml|18854|promyelocytic leukemia	AK156054|Pml|18854|promyelocytic leukemia	AK157346|Pml|18854|promyelocytic leukemia	AK156279|Pml|18854|promyelocytic leukemia	U33626|Pml|18854|promyelocytic leukemia	AK156175|Pml|18854|promyelocytic leukemia	BC020990|Pml|18854|promyelocytic leukemia	AK137538|Pml|18854|promyelocytic leukemia	AK157035|Pml|18854|promyelocytic leukemia
mm9_v1_chr8_-_8666771_8666782	4.15781	BPTF.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr3_-_95622554_95622875	4.14934	BPTF.p2	AK129150|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK154692|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	BC067054|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK083674|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK087157|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK012860|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK015972|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	NM_001081293|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2
mm9_v1_chr17_+_34442808_34442831	4.14376	BPTF.p2	NM_010382|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr10_-_53349799_53349820	4.14344	BPTF.p2	AK018494|Mcm9|71567|minichromosome maintenance complex component 9
mm9_v1_chr2_+_11093936_11094008	4.13554	BPTF.p2	AK037664|Prkcq|18761|protein kinase C, theta	D11091|Prkcq|18761|protein kinase C, theta	NM_008859|Prkcq|18761|protein kinase C, theta
mm9_v1_chr11_-_116711807_116712035	4.12544	BPTF.p2	AK211203|Srsf2|20382|serine/arginine-rich splicing factor 2	AK207032|Srsf2|20382|serine/arginine-rich splicing factor 2	AK212169|Srsf2|20382|serine/arginine-rich splicing factor 2	AK220014|Srsf2|20382|serine/arginine-rich splicing factor 2	AF250134|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr11_-_69635657_69635766	4.12294	BPTF.p2	BC100505|Spem1|74288|sperm maturation 1	BC048760|Spem1|74288|sperm maturation 1	EF120626|Spem1|74288|sperm maturation 1	NM_028855|Spem1|74288|sperm maturation 1	AK007080|Spem1|74288|sperm maturation 1
mm9_v1_chr7_+_29573987_29573995	4.12261	BPTF.p2	BC044761|Rinl|320435|Ras and Rab interactor-like	BC046530|Rinl|320435|Ras and Rab interactor-like	NM_177158|Rinl|320435|Ras and Rab interactor-like	AK020687|Rinl|320435|Ras and Rab interactor-like	AK030993|Rinl|320435|Ras and Rab interactor-like
mm9_v1_chr16_+_44173356_44173509	4.12051	BPTF.p2	NM_001029889|Gm608|207806|predicted gene 608
mm9_v1_chr13_-_100874021_100874024	4.09897	BPTF.p2	AK045292|Bdp1|544971|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB	NM_001081061|Bdp1|544971|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
mm9_v1_chr18_-_84851298_84851466	4.08038	BPTF.p2	AK131124|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK149751|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152729|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK153040|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152442|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK159129|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)
mm9_v1_chr6_+_29222698_29222749	4.07505	BPTF.p2	BC083056|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	AF141311|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr2_+_69588414_69588564	4.07427	BPTF.p2	AK079931|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK045812|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr10_-_79563929_79563935	4.07073	BPTF.p2	AK149806|Sbno2|216161|strawberry notch homolog 2 (Drosophila)
mm9_v1_chr2_-_164182009_164182029	4.07031	BPTF.p2	U94341|Slpi|20568|secretory leukocyte peptidase inhibitor	U88093|Slpi|20568|secretory leukocyte peptidase inhibitor	AK010170|Slpi|20568|secretory leukocyte peptidase inhibitor
mm9_v1_chr1_-_195027508_195027739	4.06584	BPTF.p2	AK036608|Traf3ip3|215243|TRAF3 interacting protein 3	BC036561|Traf3ip3|215243|TRAF3 interacting protein 3	AK031400|Traf3ip3|215243|TRAF3 interacting protein 3	AK080080|Traf3ip3|215243|TRAF3 interacting protein 3	AK041994|Traf3ip3|215243|TRAF3 interacting protein 3	NM_153137|Traf3ip3|215243|TRAF3 interacting protein 3
mm9_v1_chr10_-_122550401_122550537	4.06368	BPTF.p2	AK088952|Usp15|14479|ubiquitin specific peptidase 15
mm9_v1_chr17_+_8118823_8118919	4.05527	BPTF.p2	NM_145968|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC030886|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC039780|Tagap|72536|T-cell activation Rho GTPase-activating protein	BC150728|Tagap|72536|T-cell activation Rho GTPase-activating protein
mm9_v1_chr6_+_71323420_71323597	4.0367	BPTF.p2	M12052|Cd8a|12525|CD8 antigen, alpha chain	NM_001081110|Cd8a|12525|CD8 antigen, alpha chain	NM_009857|Cd8a|12525|CD8 antigen, alpha chain	M12825|Cd8a|12525|CD8 antigen, alpha chain	M16981|Cd8a|12525|CD8 antigen, alpha chain	AK088128|Cd8a|12525|CD8 antigen, alpha chain	AK088214|Cd8a|12525|CD8 antigen, alpha chain	AK088447|Cd8a|12525|CD8 antigen, alpha chain	AK037467|Cd8a|12525|CD8 antigen, alpha chain	AK088414|Cd8a|12525|CD8 antigen, alpha chain	U34881|Cd8a|12525|CD8 antigen, alpha chain	BC030679|Cd8a|12525|CD8 antigen, alpha chain	AK137937|Cd8a|12525|CD8 antigen, alpha chain	AK017889|Cd8a|12525|CD8 antigen, alpha chain
mm9_v1_chr6_-_48720814_48720859	4.02695	BPTF.p2	BC028427|Gimap3|83408|GTPase, IMAP family member 3	BC062246|Gimap3|83408|GTPase, IMAP family member 3	BC094914|Gimap3|83408|GTPase, IMAP family member 3	BC037362|Gimap3|83408|GTPase, IMAP family member 3	AB164418|Gimap3|83408|GTPase, IMAP family member 3	AF337052|Gimap3|83408|GTPase, IMAP family member 3	NM_031247|Gimap3|83408|GTPase, IMAP family member 3
mm9_v1_chr7_-_75409118_75409118	4.02606	BPTF.p2	AK021221|Pgpep1l|78444|pyroglutamyl-peptidase I-like	NM_030101|Pgpep1l|78444|pyroglutamyl-peptidase I-like
mm9_v1_chrX_-_159402465_159402479	4.0207	BPTF.p2	BC010751|S100g|12309|S100 calcium binding protein G
mm9_v1_chr7_-_108993807_108993846	4.01524	BPTF.p2	BC022108|Folr2|14276|folate receptor 2 (fetal)
mm9_v1_chr7_-_87679873_87680004	4.01105	BPTF.p2	AB008674|Blm|12144|Bloom syndrome, RecQ helicase-like	NM_007550|Blm|12144|Bloom syndrome, RecQ helicase-like	AK164605|Blm|12144|Bloom syndrome, RecQ helicase-like	Z98263|Blm|12144|Bloom syndrome, RecQ helicase-like	AK137022|Blm|12144|Bloom syndrome, RecQ helicase-like	AK157898|Blm|12144|Bloom syndrome, RecQ helicase-like	NM_001042527|Blm|12144|Bloom syndrome, RecQ helicase-like
mm9_v1_chr1_-_69732373_69732533	3.9902	BPTF.p2	BC138606|Ikzf2|22779|IKAROS family zinc finger 2	BC138608|Ikzf2|22779|IKAROS family zinc finger 2	AK047925|Ikzf2|22779|IKAROS family zinc finger 2	AF044257|Ikzf2|22779|IKAROS family zinc finger 2	NM_011770|Ikzf2|22779|IKAROS family zinc finger 2
mm9_v1_chr16_-_92826239_92826287	3.98923	BPTF.p2	BC069929|Runx1|12394|runt related transcription factor 1	AK137493|Runx1|12394|runt related transcription factor 1
mm9_v1_chrX_+_39855629_39855874	3.98731	BPTF.p2	AK042476|Sh2d1a|20400|SH2 domain protein 1A	AF072903|Sh2d1a|20400|SH2 domain protein 1A	AK040076|Sh2d1a|20400|SH2 domain protein 1A	NM_011364|Sh2d1a|20400|SH2 domain protein 1A	BC065390|Sh2d1a|20400|SH2 domain protein 1A	AF097632|Sh2d1a|20400|SH2 domain protein 1A	AF097633|Sh2d1a|20400|SH2 domain protein 1A	BC147367|Sh2d1a|20400|SH2 domain protein 1A	BC147368|Sh2d1a|20400|SH2 domain protein 1A
mm9_v1_chr11_-_60624592_60624671	3.97844	BPTF.p2	AF237702|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94478|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94479|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	BC026055|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK132342|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK010439|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr17_-_86544514_86544514	3.97448	BPTF.p2	AK021298|Srbd1|78586|S1 RNA binding domain 1	NM_030133|Srbd1|78586|S1 RNA binding domain 1
mm9_v1_chr18_+_67959756_67959787	3.97407	BPTF.p2	AK052420|Cep192|70799|centrosomal protein 192	NM_027556|Cep192|70799|centrosomal protein 192	AK089253|Cep192|70799|centrosomal protein 192	AK158414|Cep192|70799|centrosomal protein 192
mm9_v1_chr5_+_65221116_65221144	3.96935	BPTF.p2	AK036932|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr15_+_102126735_102126806	3.96708	BPTF.p2	AK129072|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	AY588413|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	BC145844|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	BC145846|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)
mm9_v1_chr4_+_140703843_140703846	3.96405	BPTF.p2	AK170202|Fbxo42|213499|F-box protein 42	AK171215|Fbxo42|213499|F-box protein 42	BC058667|Fbxo42|213499|F-box protein 42	AK150804|Fbxo42|213499|F-box protein 42
mm9_v1_chr9_-_108976549_108976650	3.93665	BPTF.p2	AK172342|Atrip|235610|ATR interacting protein	BC078458|Atrip|235610|ATR interacting protein	AK171423|Atrip|235610|ATR interacting protein	AK020102|Atrip|235610|ATR interacting protein	AK031257|Atrip|235610|ATR interacting protein	NM_172774|Atrip|235610|ATR interacting protein
mm9_v1_chr7_-_87532756_87532844	3.93384	BPTF.p2	BC100306|Fes|14159|feline sarcoma oncogene	AK170418|Fes|14159|feline sarcoma oncogene	AK143639|Fes|14159|feline sarcoma oncogene	AK004587|Fes|14159|feline sarcoma oncogene	AK155861|Fes|14159|feline sarcoma oncogene	NM_010194|Fes|14159|feline sarcoma oncogene	BC038130|Fes|14159|feline sarcoma oncogene
mm9_v1_chr18_-_35097374_35097402	3.9245	BPTF.p2	AK028123|Hspa9|15526|heat shock protein 9
mm9_v1_chr8_+_68910191_68910205	3.91562	BPTF.p2	AK036489|March1|72925|membrane-associated ring finger (C3HC4) 1	AK089040|March1|72925|membrane-associated ring finger (C3HC4) 1	AK152592|March1|72925|membrane-associated ring finger (C3HC4) 1	AK163081|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166375|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr3_-_154260022_154260061	3.91549	BPTF.p2	BC087879|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	BC086686|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	BC141040|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	AK034820|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	AK030344|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	NM_001168358|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	NM_172474|Tyw3|209584|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
mm9_v1_chr6_+_53523365_53523387	3.90837	BPTF.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr11_-_106860750_106860783	3.90803	BPTF.p2	BC094011|Kpna2|16647|karyopherin (importin) alpha 2	BC106110|Kpna2|16647|karyopherin (importin) alpha 2	BC082280|Kpna2|16647|karyopherin (importin) alpha 2	BC086789|Kpna2|16647|karyopherin (importin) alpha 2	BC006720|Kpna2|16647|karyopherin (importin) alpha 2	BC003274|Kpna2|16647|karyopherin (importin) alpha 2	U12270|Kpna2|16647|karyopherin (importin) alpha 2	AK139850|Kpna2|16647|karyopherin (importin) alpha 2	AK166982|Kpna2|16647|karyopherin (importin) alpha 2	AK075952|Kpna2|16647|karyopherin (importin) alpha 2	AK088496|Kpna2|16647|karyopherin (importin) alpha 2	AK147135|Kpna2|16647|karyopherin (importin) alpha 2	AK165577|Kpna2|16647|karyopherin (importin) alpha 2	AK166790|Kpna2|16647|karyopherin (importin) alpha 2	AK167551|Kpna2|16647|karyopherin (importin) alpha 2	AK169283|Kpna2|16647|karyopherin (importin) alpha 2	AK166577|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr6_+_57531124_57531158	3.9061	BPTF.p2	AK017888|Herc6|67138|hect domain and RLD 6
mm9_v1_chr6_-_88396477_88396541	3.90245	BPTF.p2	AF268871|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AF283518|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC099675|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK147924|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC024915|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK171885|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK028424|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK087501|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	NM_023060|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific
mm9_v1_chr11_+_62387987_62388017	3.90057	BPTF.p2	NM_011706|Trpv2|22368|transient receptor potential cation channel, subfamily V, member 2
mm9_v1_chr12_+_85758189_85758266	3.89835	BPTF.p2	AK016795|Rnf113a2|66381|ring finger protein 113A2	BC116426|Rnf113a2|66381|ring finger protein 113A2	BC058194|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr6_+_113339088_113339253	3.87231	BPTF.p2	AK003923|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK029462|Ttll3|101100|tubulin tyrosine ligase-like family, member 3	NM_001142732|Ttll3|101100|tubulin tyrosine ligase-like family, member 3
mm9_v1_chr2_+_152695336_152695453	3.87159	BPTF.p2	AK167030|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK011311|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr5_+_119214502_119214629	3.87039	BPTF.p2	AK018557|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr11_+_53138176_53138190	3.85698	BPTF.p2	AK010803|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK027985|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC025078|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK020177|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK169856|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC087902|Zcchc10|67966|zinc finger, CCHC domain containing 10	NM_026479|Zcchc10|67966|zinc finger, CCHC domain containing 10
mm9_v1_chr1_-_13579885_13579986	3.85401	BPTF.p2	AK168708|Tram1|72265|translocating chain-associating membrane protein 1	AK151240|Tram1|72265|translocating chain-associating membrane protein 1	AK152343|Tram1|72265|translocating chain-associating membrane protein 1	AK152991|Tram1|72265|translocating chain-associating membrane protein 1	AK150777|Tram1|72265|translocating chain-associating membrane protein 1	BC012401|Tram1|72265|translocating chain-associating membrane protein 1	AK145291|Tram1|72265|translocating chain-associating membrane protein 1	AK146207|Tram1|72265|translocating chain-associating membrane protein 1	AK088814|Tram1|72265|translocating chain-associating membrane protein 1	AK142658|Tram1|72265|translocating chain-associating membrane protein 1	AK155905|Tram1|72265|translocating chain-associating membrane protein 1	AK159203|Tram1|72265|translocating chain-associating membrane protein 1	AK159350|Tram1|72265|translocating chain-associating membrane protein 1	NM_028173|Tram1|72265|translocating chain-associating membrane protein 1	AK150551|Tram1|72265|translocating chain-associating membrane protein 1	AK151409|Tram1|72265|translocating chain-associating membrane protein 1	AK151664|Tram1|72265|translocating chain-associating membrane protein 1	AK152338|Tram1|72265|translocating chain-associating membrane protein 1	AK153379|Tram1|72265|translocating chain-associating membrane protein 1	AK028304|Tram1|72265|translocating chain-associating membrane protein 1	AK159878|Tram1|72265|translocating chain-associating membrane protein 1
mm9_v1_chr9_-_106378494_106378548	3.84426	BPTF.p2	AK165070|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	BC014870|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	AK170541|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	AY046317|Parp3|235587|poly (ADP-ribose) polymerase family, member 3
mm9_v1_chr1_+_60965868_60966014	3.84399	BPTF.p2	BC042741|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	NM_009843|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	AK138891|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	X05719|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	BC052683|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4	AB097214|Ctla4|12477|cytotoxic T-lymphocyte-associated protein 4
mm9_v1_chr5_+_113786313_113786453	3.84345	BPTF.p2	AF069744|Aym1|503692|activator of yeast meiotic promoters 1	NM_001012726|Aym1|503692|activator of yeast meiotic promoters 1	BC145860|Aym1|503692|activator of yeast meiotic promoters 1	BC145862|Aym1|503692|activator of yeast meiotic promoters 1
mm9_v1_chr2_-_24647157_24647300	3.83956	BPTF.p2	AK020308|Ehmt1|77683|euchromatic histone methyltransferase 1
mm9_v1_chr17_-_35089399_35089425	3.83313	BPTF.p2	BC058123|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK003073|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK004150|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK002372|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene
mm9_v1_chr11_-_6420931_6420971	3.83022	BPTF.p2	AK146251|Myo1g|246177|myosin IG	AK171505|Myo1g|246177|myosin IG	AK159700|Myo1g|246177|myosin IG	AK036461|Myo1g|246177|myosin IG	AK171284|Myo1g|246177|myosin IG	AK152797|Myo1g|246177|myosin IG	AK169450|Myo1g|246177|myosin IG	AK030825|Myo1g|246177|myosin IG	AK088011|Myo1g|246177|myosin IG	NM_178440|Myo1g|246177|myosin IG
mm9_v1_chr4_+_133109291_133109339	3.82652	BPTF.p2	AK004930|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	BC019540|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	NM_011850|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	AY360323|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	AY360324|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2
mm9_v1_chr13_+_24904944_24904959	3.82536	BPTF.p2	AK088171|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr2_+_32583221_32583245	3.8113	BPTF.p2	AK042709|Sh2d3c|27387|SH2 domain containing 3C	AK085885|Sh2d3c|27387|SH2 domain containing 3C	AK135231|Sh2d3c|27387|SH2 domain containing 3C	AB030442|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr5_-_114280434_114280521	3.79909	BPTF.p2	AK089214|Selplg|20345|selectin, platelet (p-selectin) ligand	AK155762|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156933|Selplg|20345|selectin, platelet (p-selectin) ligand	AK158134|Selplg|20345|selectin, platelet (p-selectin) ligand	BC003874|Selplg|20345|selectin, platelet (p-selectin) ligand	AK172077|Selplg|20345|selectin, platelet (p-selectin) ligand	AK171693|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156551|Selplg|20345|selectin, platelet (p-selectin) ligand	AK089188|Selplg|20345|selectin, platelet (p-selectin) ligand	NM_009151|Selplg|20345|selectin, platelet (p-selectin) ligand
mm9_v1_chr19_+_37282150_37282364	3.79074	BPTF.p2	AK007511|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132455|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132457|March5|69104|membrane-associated ring finger (C3HC4) 5	BC064752|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107215|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107214|March5|69104|membrane-associated ring finger (C3HC4) 5
mm9_v1_chr3_-_90499611_90499616	3.7818	BPTF.p2	AK143826|S100a9|20202|S100 calcium binding protein A9 (calgranulin B)	M83219|S100a9|20202|S100 calcium binding protein A9 (calgranulin B)	NM_009114|S100a9|20202|S100 calcium binding protein A9 (calgranulin B)
mm9_v1_chr11_+_54336344_54336357	3.77972	BPTF.p2	AK167055|Rapgef6|192786|Rap guanine nucleotide exchange factor (GEF) 6	NM_175258|Rapgef6|192786|Rap guanine nucleotide exchange factor (GEF) 6	AK040089|Rapgef6|192786|Rap guanine nucleotide exchange factor (GEF) 6
mm9_v1_chr6_-_114871769_114871855	3.77155	BPTF.p2	BC048841|Vgll4|232334|vestigial like 4 (Drosophila)	NM_177683|Vgll4|232334|vestigial like 4 (Drosophila)	BC060305|Vgll4|232334|vestigial like 4 (Drosophila)	AK144447|Vgll4|232334|vestigial like 4 (Drosophila)	AK078466|Vgll4|232334|vestigial like 4 (Drosophila)
mm9_v1_chr14_+_75576599_75576717	3.7678	BPTF.p2	AK088202|Lcp1|18826|lymphocyte cytosolic protein 1	U82610|Lcp1|18826|lymphocyte cytosolic protein 1	AK169728|Lcp1|18826|lymphocyte cytosolic protein 1	AK171751|Lcp1|18826|lymphocyte cytosolic protein 1	AK030996|Lcp1|18826|lymphocyte cytosolic protein 1	AK169972|Lcp1|18826|lymphocyte cytosolic protein 1	AK167261|Lcp1|18826|lymphocyte cytosolic protein 1	AK153061|Lcp1|18826|lymphocyte cytosolic protein 1	AK153082|Lcp1|18826|lymphocyte cytosolic protein 1	AK151542|Lcp1|18826|lymphocyte cytosolic protein 1	AK089922|Lcp1|18826|lymphocyte cytosolic protein 1	AK151720|Lcp1|18826|lymphocyte cytosolic protein 1	AK152668|Lcp1|18826|lymphocyte cytosolic protein 1	AK152891|Lcp1|18826|lymphocyte cytosolic protein 1	AK152902|Lcp1|18826|lymphocyte cytosolic protein 1	AK168062|Lcp1|18826|lymphocyte cytosolic protein 1	AK153206|Lcp1|18826|lymphocyte cytosolic protein 1	AK169833|Lcp1|18826|lymphocyte cytosolic protein 1	AK030806|Lcp1|18826|lymphocyte cytosolic protein 1	AK151155|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr17_+_21672490_21672637	3.76371	BPTF.p2	AK032299|Zfp52|22710|zinc finger protein 52	NM_144515|Zfp52|22710|zinc finger protein 52	BC021527|Zfp52|22710|zinc finger protein 52
mm9_v1_chr4_+_45031496_45031534	3.76257	BPTF.p2	NM_022811|Polr1e|64424|polymerase (RNA) I polypeptide E	AK083948|Polr1e|64424|polymerase (RNA) I polypeptide E	AK132556|Polr1e|64424|polymerase (RNA) I polypeptide E	D14336|Polr1e|64424|polymerase (RNA) I polypeptide E	BC034783|Polr1e|64424|polymerase (RNA) I polypeptide E	AK050780|Polr1e|64424|polymerase (RNA) I polypeptide E
mm9_v1_chr11_-_86400309_86400486	3.7611	BPTF.p2	AK154616|Tmem49|75909|transmembrane protein 49
mm9_v1_chr19_-_7093834_7093904	3.75967	BPTF.p2	AK161025|Fermt3|108101|fermitin family homolog 3 (Drosophila)	AK090332|Fermt3|108101|fermitin family homolog 3 (Drosophila)	AK158357|Fermt3|108101|fermitin family homolog 3 (Drosophila)	AK169682|Fermt3|108101|fermitin family homolog 3 (Drosophila)	AK149737|Fermt3|108101|fermitin family homolog 3 (Drosophila)	BC025119|Fermt3|108101|fermitin family homolog 3 (Drosophila)
mm9_v1_chr7_+_130337876_130337891	3.75352	BPTF.p2	AK014218|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr3_-_7613335_7613426	3.74578	BPTF.p2	BC110553|Il7|16196|interleukin 7	AK041307|Il7|16196|interleukin 7	NM_008371|Il7|16196|interleukin 7
mm9_v1_chr17_+_45700882_45700945	3.74087	BPTF.p2	AK155551|Slc35b2|73836|solute carrier family 35, member B2	AK144403|Slc35b2|73836|solute carrier family 35, member B2	AK003377|Slc35b2|73836|solute carrier family 35, member B2	AK090329|Slc35b2|73836|solute carrier family 35, member B2	AK152362|Slc35b2|73836|solute carrier family 35, member B2	BC025875|Slc35b2|73836|solute carrier family 35, member B2	BC036992|Slc35b2|73836|solute carrier family 35, member B2	AF414190|Slc35b2|73836|solute carrier family 35, member B2	AK154868|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr6_-_127089169_127089223	3.71442	BPTF.p2	AK182883|Ccnd2|12444|cyclin D2
mm9_v1_chr10_-_111434265_111434319	3.71176	BPTF.p2	AK137557|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	AK170051|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	BC098231|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	NM_028608|Glipr1|73690|GLI pathogenesis-related 1 (glioma)
mm9_v1_chr5_+_97520188_97520241	3.71064	BPTF.p2	AK132786|Bmp2k|140780|BMP2 inducible kinase
mm9_v1_chr2_+_119444452_119444483	3.70317	BPTF.p2	AF305710|Nusap1|108907|nucleolar and spindle associated protein 1	AK042697|Nusap1|108907|nucleolar and spindle associated protein 1	AK044819|Nusap1|108907|nucleolar and spindle associated protein 1	AK076028|Nusap1|108907|nucleolar and spindle associated protein 1	AK088389|Nusap1|108907|nucleolar and spindle associated protein 1	AK038174|Nusap1|108907|nucleolar and spindle associated protein 1	BC004787|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr2_-_60589953_60589966	3.696	BPTF.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr10_-_14438019_14438019	3.69157	BPTF.p2	AK018698|Gje1|76743|gap junction protein, epsilon 1	NM_029722|Gje1|76743|gap junction protein, epsilon 1
mm9_v1_chr5_+_91201460_91201461	3.68815	BPTF.p2	AK159278|Pf4|56744|platelet factor 4	AK160040|Pf4|56744|platelet factor 4	NM_019932|Pf4|56744|platelet factor 4
mm9_v1_chr12_-_70683972_70684096	3.68624	BPTF.p2	AK144832|Gm71|207965|predicted gene 71	AK083148|Gm71|207965|predicted gene 71	NM_001033236|Gm71|207965|predicted gene 71	BC138942|Gm71|207965|predicted gene 71	BC138943|Gm71|207965|predicted gene 71	BC145471|Gm71|207965|predicted gene 71
mm9_v1_chr9_-_7872896_7873169	3.6846	BPTF.p2	AK172636|Birc3|11796|baculoviral IAP repeat-containing 3	BC011338|Birc3|11796|baculoviral IAP repeat-containing 3	U88908|Birc3|11796|baculoviral IAP repeat-containing 3	AK162108|Birc3|11796|baculoviral IAP repeat-containing 3	NM_007464|Birc3|11796|baculoviral IAP repeat-containing 3
mm9_v1_chr10_+_51210768_51210823	3.67721	BPTF.p2	AK089372|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK155750|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK089334|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170615|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	NM_013532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC006591|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05264|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05266|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC099532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170368|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4
mm9_v1_chr2_+_112106470_112106612	3.6696	BPTF.p2	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr19_-_29436298_29436382	3.66827	BPTF.p2	AK219906|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene	BC024953|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene	AK168454|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene	AK170700|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene	AK017215|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene	NM_026362|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene	AK003543|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene	AK017171|5033414D02Rik|67759|RIKEN cDNA 5033414D02 gene
mm9_v1_chr16_+_44370127_44370136	3.66521	BPTF.p2	BC024956|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr4_+_116692006_116692070	3.66229	BPTF.p2	NM_001111277|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	NM_175135|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172173|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK145856|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172302|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3
mm9_v1_chr9_+_123428782_123429096	3.66066	BPTF.p2	AK212865|Limd1|29806|LIM domains containing 1	AK218834|Limd1|29806|LIM domains containing 1	AK213065|Limd1|29806|LIM domains containing 1	AK214169|Limd1|29806|LIM domains containing 1	AK211030|Limd1|29806|LIM domains containing 1
mm9_v1_chr11_-_11708917_11708964	3.65704	BPTF.p2	BC051942|Fignl1|60530|fidgetin-like 1	BC052415|Fignl1|60530|fidgetin-like 1	AK082092|Fignl1|60530|fidgetin-like 1	AK143850|Fignl1|60530|fidgetin-like 1	AK051324|Fignl1|60530|fidgetin-like 1	AK051874|Fignl1|60530|fidgetin-like 1	AK088574|Fignl1|60530|fidgetin-like 1	AK086769|Fignl1|60530|fidgetin-like 1	NM_001163359|Fignl1|60530|fidgetin-like 1	NM_001163360|Fignl1|60530|fidgetin-like 1	NM_021891|Fignl1|60530|fidgetin-like 1
mm9_v1_chr1_+_19093102_19093153	3.65002	BPTF.p2	AK132112|Tcfap2d|226896|transcription factor AP-2, delta	NM_153154|Tcfap2d|226896|transcription factor AP-2, delta	BC152324|Tcfap2d|226896|transcription factor AP-2, delta	BC152325|Tcfap2d|226896|transcription factor AP-2, delta
mm9_v1_chr10_-_36855292_36855411	3.64968	BPTF.p2	AK082623|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK136452|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr7_-_30857837_30857841	3.64853	BPTF.p2	AK037211|Zfp82|330502|zinc finger protein 82	NM_177889|Zfp82|330502|zinc finger protein 82
mm9_v1_chr10_+_116387609_116387672	3.63758	BPTF.p2	AK084517|4933412E12Rik|71086|RIKEN cDNA 4933412E12 gene	AK016788|4933412E12Rik|71086|RIKEN cDNA 4933412E12 gene
mm9_v1_chr8_-_23296255_23296290	3.63756	BPTF.p2	AK132463|Ckap2|80986|cytoskeleton associated protein 2	BC145666|Ckap2|80986|cytoskeleton associated protein 2	BC146023|Ckap2|80986|cytoskeleton associated protein 2	AY692438|Ckap2|80986|cytoskeleton associated protein 2	NM_001004140|Ckap2|80986|cytoskeleton associated protein 2
mm9_v1_chr2_-_164182242_164182242	3.62877	BPTF.p2	BC028509|Slpi|20568|secretory leukocyte peptidase inhibitor	NM_011414|Slpi|20568|secretory leukocyte peptidase inhibitor
mm9_v1_chr4_-_149072755_149072816	3.62316	BPTF.p2	BC035203|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_001164049|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_001164050|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_008840|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm9_v1_chr15_-_34372832_34373030	3.61929	BPTF.p2	BC092137|Rpl30|19946|ribosomal protein L30	BC069949|Rpl30|19946|ribosomal protein L30	BC086890|Rpl30|19946|ribosomal protein L30	AK002988|Rpl30|19946|ribosomal protein L30	AK137031|Rpl30|19946|ribosomal protein L30	BC086891|Rpl30|19946|ribosomal protein L30	BC100608|Rpl30|19946|ribosomal protein L30	NM_009083|Rpl30|19946|ribosomal protein L30	NM_001163485|Rpl30|19946|ribosomal protein L30
mm9_v1_chr6_+_122407245_122407359	3.61612	BPTF.p2	AK159742|Rps27a|78294|ribosomal protein S27A
mm9_v1_chrX_+_54296250_54296269	3.61048	BPTF.p2	AK038616|Brs3|12209|bombesin-like receptor 3	NM_009766|Brs3|12209|bombesin-like receptor 3	BC106961|Brs3|12209|bombesin-like receptor 3	BC106962|Brs3|12209|bombesin-like receptor 3
mm9_v1_chr13_+_24706474_24706497	3.60554	BPTF.p2	AK041665|Fam65b|193385|family with sequence similarity 65, member B	NM_178658|Fam65b|193385|family with sequence similarity 65, member B	AK036452|Fam65b|193385|family with sequence similarity 65, member B	AK040887|Fam65b|193385|family with sequence similarity 65, member B
mm9_v1_chr9_+_21125147_21125248	3.60099	BPTF.p2	AK153992|Slc44a2|68682|solute carrier family 44, member 2	BC023763|Slc44a2|68682|solute carrier family 44, member 2	AK043924|Slc44a2|68682|solute carrier family 44, member 2	AK029457|Slc44a2|68682|solute carrier family 44, member 2	AK041533|Slc44a2|68682|solute carrier family 44, member 2	AK088553|Slc44a2|68682|solute carrier family 44, member 2
mm9_v1_chrX_-_154006916_154006936	3.57478	BPTF.p2	AK161451|Yy2|100073351|Yy2 transcription factor	NM_001098723|Yy2|100073351|Yy2 transcription factor	AK077220|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr1_+_59741800_59741942	3.57248	BPTF.p2	BC076604|Nop58|55989|NOP58 ribonucleoprotein homolog (yeast)	AK134286|Nop58|55989|NOP58 ribonucleoprotein homolog (yeast)	NM_018868|Nop58|55989|NOP58 ribonucleoprotein homolog (yeast)	AK133959|Nop58|55989|NOP58 ribonucleoprotein homolog (yeast)	AK044216|Nop58|55989|NOP58 ribonucleoprotein homolog (yeast)	BC085135|Nop58|55989|NOP58 ribonucleoprotein homolog (yeast)	AF053232|Nop58|55989|NOP58 ribonucleoprotein homolog (yeast)
mm9_v1_chr7_-_34977928_34978057	3.57102	BPTF.p2	BC025090|Pdcd2l|68079|programmed cell death 2-like	BC038524|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr17_-_24844481_24844605	3.56642	BPTF.p2	AK193903|Tbl3|213773|transducin (beta)-like 3	AK210914|Tbl3|213773|transducin (beta)-like 3	AK210933|Tbl3|213773|transducin (beta)-like 3	BC019504|Tbl3|213773|transducin (beta)-like 3	AK137554|Tbl3|213773|transducin (beta)-like 3	AK028806|Tbl3|213773|transducin (beta)-like 3	AK163228|Tbl3|213773|transducin (beta)-like 3	AK165125|Tbl3|213773|transducin (beta)-like 3	AK167127|Tbl3|213773|transducin (beta)-like 3	AK081572|Tbl3|213773|transducin (beta)-like 3	AK149940|Tbl3|213773|transducin (beta)-like 3	AK083399|Tbl3|213773|transducin (beta)-like 3	AK081966|Tbl3|213773|transducin (beta)-like 3	NM_145396|Tbl3|213773|transducin (beta)-like 3
mm9_v1_chr10_+_7387285_7387382	3.56459	BPTF.p2	AK146262|Nup43|69912|nucleoporin 43	NM_145706|Nup43|69912|nucleoporin 43	AK012191|Nup43|69912|nucleoporin 43	BC011060|Nup43|69912|nucleoporin 43	AK011422|Nup43|69912|nucleoporin 43	AK141339|Nup43|69912|nucleoporin 43	AK090019|Nup43|69912|nucleoporin 43	BC052530|Nup43|69912|nucleoporin 43
mm9_v1_chr2_+_85860710_85860796	3.55976	BPTF.p2	AK035445|Olfr1033|258571|olfactory receptor 1033	AK041245|Olfr1033|258571|olfactory receptor 1033	NM_146578|Olfr1033|258571|olfactory receptor 1033
mm9_v1_chr3_+_129604333_129604418	3.55296	BPTF.p2	NM_009811|Casp6|12368|caspase 6	AK168842|Casp6|12368|caspase 6	AK146363|Casp6|12368|caspase 6	AK011710|Casp6|12368|caspase 6	BC002022|Casp6|12368|caspase 6	AK165998|Casp6|12368|caspase 6	AK164321|Casp6|12368|caspase 6
mm9_v1_chr2_-_119444196_119444240	3.54383	BPTF.p2	BC115883|Oip5|70645|Opa interacting protein 5	BC116660|Oip5|70645|Opa interacting protein 5	AK017825|Oip5|70645|Opa interacting protein 5	AK045323|Oip5|70645|Opa interacting protein 5	NM_001042653|Oip5|70645|Opa interacting protein 5
mm9_v1_chr17_+_74898763_74898780	3.54376	BPTF.p2	AK086213|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr3_+_95733228_95733353	3.5374	BPTF.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr2_+_170111212_170111359	3.5202	BPTF.p2	
mm9_v1_chr10_-_116813919_116814033	3.52006	BPTF.p2	AK048615|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK046856|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK168764|Cpsf6|432508|cleavage and polyadenylation specific factor 6	BC068133|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK049749|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK077684|Cpsf6|432508|cleavage and polyadenylation specific factor 6	NM_001013391|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr5_+_150076605_150076688	3.51824	BPTF.p2	AK004002|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	BC026209|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	NM_009663|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	AK075967|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	M96554|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein
mm9_v1_chr1_-_55044032_55044295	3.51505	BPTF.p2	AK077993|Sf3b1|81898|splicing factor 3b, subunit 1	AK087700|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr14_-_64162562_64162594	3.5108	BPTF.p2	AK152320|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr3_-_19935292_19935325	3.4975	BPTF.p2	AK157953|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK149359|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK166194|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK155497|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK171997|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK086167|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AF393747|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK079896|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AF393780|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK049204|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	NM_001146323|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	NM_001146324|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	NM_080634|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)	AK036663|Hps3|12807|Hermansky-Pudlak syndrome 3 homolog (human)
mm9_v1_chr2_-_126959605_126959689	3.48553	BPTF.p2	AK042706|Ncaph|215387|non-SMC condensin I complex, subunit H	BC025060|Ncaph|215387|non-SMC condensin I complex, subunit H	BC021499|Ncaph|215387|non-SMC condensin I complex, subunit H	AK028919|Ncaph|215387|non-SMC condensin I complex, subunit H	AK080433|Ncaph|215387|non-SMC condensin I complex, subunit H	NM_144818|Ncaph|215387|non-SMC condensin I complex, subunit H
mm9_v1_chr4_+_58298833_58298983	3.485	BPTF.p2	NM_001037127|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037128|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037129|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037130|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001165996|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_010944|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37708|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37709|Musk|18198|muscle, skeletal, receptor tyrosine kinase	BC100342|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY360453|Musk|18198|muscle, skeletal, receptor tyrosine kinase	X86444|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955296|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955297|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955298|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956403|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956404|Musk|18198|muscle, skeletal, receptor tyrosine kinase
mm9_v1_chr13_-_77230519_77230547	3.47672	BPTF.p2	BC083095|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr1_-_127289729_127289773	3.46598	BPTF.p2	
mm9_v1_chr8_+_26707480_26707573	3.45597	BPTF.p2	AK054186|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene	AK085892|D830025C05Rik|100042416|RIKEN cDNA D830025C05 gene
mm9_v1_chr10_+_52111413_52111541	3.44031	BPTF.p2	AK017780|Nepn|66650|nephrocan	AY938536|Nepn|66650|nephrocan	NM_025684|Nepn|66650|nephrocan	AK017656|Nepn|66650|nephrocan	BC132046|Nepn|66650|nephrocan	BC132048|Nepn|66650|nephrocan	AK017842|Nepn|66650|nephrocan
mm9_v1_chr19_-_41289262_41289457	3.4234	BPTF.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr1_-_20810238_20810392	3.41989	BPTF.p2	X62154|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	BC031700|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	NM_008563|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK146497|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK147065|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	BC020400|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK148006|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK088142|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK133850|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)	AK145563|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)
mm9_v1_chrX_-_7753254_7753306	3.41385	BPTF.p2	BC113777|Tbc1d25|209815|TBC1 domain family, member 25	BC128565|Tbc1d25|209815|TBC1 domain family, member 25	BC128566|Tbc1d25|209815|TBC1 domain family, member 25	AK078145|Tbc1d25|209815|TBC1 domain family, member 25	NM_001166437|Tbc1d25|209815|TBC1 domain family, member 25	NM_172478|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr9_-_48148740_48148980	3.41019	BPTF.p2	AK162300|Fam55b|78252|family with sequence similarity 55, member B	AK033667|Fam55b|78252|family with sequence similarity 55, member B	AK136668|Fam55b|78252|family with sequence similarity 55, member B	BC140955|Fam55b|78252|family with sequence similarity 55, member B	AK019469|Fam55b|78252|family with sequence similarity 55, member B	AK165213|Fam55b|78252|family with sequence similarity 55, member B	AK157096|Fam55b|78252|family with sequence similarity 55, member B	AK165372|Fam55b|78252|family with sequence similarity 55, member B	NM_030069|Fam55b|78252|family with sequence similarity 55, member B
mm9_v1_chrX_-_154036606_154036649	3.39838	BPTF.p2	AK148325|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	NM_172307|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr3_+_51299646_51299685	3.39572	BPTF.p2	
mm9_v1_chrX_+_104344953_104344955	3.39225	BPTF.p2	NM_175442|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene	AK041740|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr9_-_70269246_70269297	3.39049	BPTF.p2	CT010286|Ccnb2|12442|cyclin B2	BC008247|Ccnb2|12442|cyclin B2
mm9_v1_chr1_+_94869695_94869699	3.38617	BPTF.p2	NM_001104529|Gpr35|64095|G protein-coupled receptor 35	AK036503|Gpr35|64095|G protein-coupled receptor 35	AK160972|Gpr35|64095|G protein-coupled receptor 35
mm9_v1_chrX_-_163768423_163768472	3.38366	BPTF.p2	AF334943|Tlr7|170743|toll-like receptor 7	AF334942|Tlr7|170743|toll-like receptor 7	AK036549|Tlr7|170743|toll-like receptor 7	AK154906|Tlr7|170743|toll-like receptor 7	NM_133211|Tlr7|170743|toll-like receptor 7	AK156908|Tlr7|170743|toll-like receptor 7
mm9_v1_chr1_-_157881946_157881946	3.37986	BPTF.p2	NM_001160019|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr4_-_140695648_140695720	3.37861	BPTF.p2	BC066992|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171420|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK027934|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK145912|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171702|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_001025608|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_174996|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed
mm9_v1_chr7_+_135206153_135206260	3.37666	BPTF.p2	NM_001082960|Itgam|16409|integrin alpha M	NM_008401|Itgam|16409|integrin alpha M	AK170324|Itgam|16409|integrin alpha M	AK155671|Itgam|16409|integrin alpha M	AK089521|Itgam|16409|integrin alpha M	AK155717|Itgam|16409|integrin alpha M	AK154474|Itgam|16409|integrin alpha M	AK171150|Itgam|16409|integrin alpha M	AK155006|Itgam|16409|integrin alpha M	AK155520|Itgam|16409|integrin alpha M	AK154224|Itgam|16409|integrin alpha M	AK154798|Itgam|16409|integrin alpha M
mm9_v1_chr2_+_90875783_90875847	3.3751	BPTF.p2	AK009672|Rapsn|19400|receptor-associated protein of the synapse	NM_009023|Rapsn|19400|receptor-associated protein of the synapse	X15788|Rapsn|19400|receptor-associated protein of the synapse	BC111863|Rapsn|19400|receptor-associated protein of the synapse	J03962|Rapsn|19400|receptor-associated protein of the synapse
mm9_v1_chr11_-_45768976_45768987	3.37431	BPTF.p2	BC092541|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK017532|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr14_-_62250728_62250729	3.36596	BPTF.p2	AK143097|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK162803|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK164623|Dleu2|668253|deleted in lymphocytic leukemia, 2
mm9_v1_chr11_+_43534658_43534687	3.36238	BPTF.p2	AK086604|Pwwp2a|70802|PWWP domain containing 2A	AK039984|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chr5_+_142877419_142877473	3.36028	BPTF.p2	NM_199068|Foxk1|17425|forkhead box K1	AK147375|Foxk1|17425|forkhead box K1	L26507|Foxk1|17425|forkhead box K1	U95016|Foxk1|17425|forkhead box K1	BC060238|Foxk1|17425|forkhead box K1
mm9_v1_chr2_-_25483461_25483497	3.35705	BPTF.p2	AK159651|Fcna|14133|ficolin A	AK133539|Fcna|14133|ficolin A	NM_007995|Fcna|14133|ficolin A
mm9_v1_chr15_-_76701806_76701851	3.34767	BPTF.p2	AK153967|Zfp251|71591|zinc finger protein 251	AK047148|Zfp251|71591|zinc finger protein 251	AK140082|Zfp251|71591|zinc finger protein 251
mm9_v1_chr5_-_130500116_130500235	3.3473	BPTF.p2	AK148764|Asl|109900|argininosuccinate lyase	AK168739|Asl|109900|argininosuccinate lyase	AK138423|Asl|109900|argininosuccinate lyase	BC016670|Asl|109900|argininosuccinate lyase	NM_133768|Asl|109900|argininosuccinate lyase	AK010922|Asl|109900|argininosuccinate lyase	AK076453|Asl|109900|argininosuccinate lyase	AK140160|Asl|109900|argininosuccinate lyase
mm9_v1_chr19_-_10813341_10813463	3.33107	BPTF.p2	M15177|Cd5|12507|CD5 antigen	U65961|Cd5|12507|CD5 antigen	AK042105|Cd5|12507|CD5 antigen	AK089076|Cd5|12507|CD5 antigen	AK143736|Cd5|12507|CD5 antigen	BC011258|Cd5|12507|CD5 antigen	NM_007650|Cd5|12507|CD5 antigen
mm9_v1_chr10_+_80392814_80392835	3.32656	BPTF.p2	AK154952|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK010420|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK149895|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	BC023815|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	NM_008655|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	X54149|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta
mm9_v1_chr5_-_73127743_73127840	3.31846	BPTF.p2	BC120552|Txk|22165|TXK tyrosine kinase	NM_013698|Txk|22165|TXK tyrosine kinase	BC137710|Txk|22165|TXK tyrosine kinase	D43963|Txk|22165|TXK tyrosine kinase
mm9_v1_chr4_-_63522069_63522317	3.3127	BPTF.p2	AK157270|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	L09754|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	BC117093|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	BC117097|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	AK030916|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8	NM_009403|Tnfsf8|21949|tumor necrosis factor (ligand) superfamily, member 8
mm9_v1_chr8_+_97856162_97856321	3.30234	BPTF.p2	NM_133954|AA960436|101985|expressed sequence AA960436	AK135527|AA960436|101985|expressed sequence AA960436	AK160901|AA960436|101985|expressed sequence AA960436	AK168683|AA960436|101985|expressed sequence AA960436	AK205015|AA960436|101985|expressed sequence AA960436	BC016418|AA960436|101985|expressed sequence AA960436	AK186661|AA960436|101985|expressed sequence AA960436
mm9_v1_chr4_+_135842056_135842075	3.29401	BPTF.p2	AK136405|Zfp46|22704|zinc finger protein 46
mm9_v1_chr9_-_106378454_106378490	3.28186	BPTF.p2	BC058754|Parp3|235587|poly (ADP-ribose) polymerase family, member 3
mm9_v1_chr16_+_59471600_59471691	3.27125	BPTF.p2	NM_025910|Mina|67014|myc induced nuclear antigen	AK007810|Mina|67014|myc induced nuclear antigen	AK032595|Mina|67014|myc induced nuclear antigen	AK013451|Mina|67014|myc induced nuclear antigen	AK014426|Mina|67014|myc induced nuclear antigen	AK019117|Mina|67014|myc induced nuclear antigen	AK031671|Mina|67014|myc induced nuclear antigen	BC025109|Mina|67014|myc induced nuclear antigen	BC058242|Mina|67014|myc induced nuclear antigen
mm9_v1_chr11_+_83755589_83755687	3.26432	BPTF.p2	NM_030096|Ddx52|78394|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	AK141200|Ddx52|78394|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	AK133545|Ddx52|78394|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	AK080767|Ddx52|78394|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	AK166789|Ddx52|78394|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	AK019204|Ddx52|78394|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	BC029094|Ddx52|78394|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
mm9_v1_chr17_-_50329593_50329893	3.25294	BPTF.p2	AK087803|Rftn1|76438|raftlin lipid raft linker 1	AK152130|Rftn1|76438|raftlin lipid raft linker 1	AK153288|Rftn1|76438|raftlin lipid raft linker 1	AK172884|Rftn1|76438|raftlin lipid raft linker 1	AK155870|Rftn1|76438|raftlin lipid raft linker 1	AK170913|Rftn1|76438|raftlin lipid raft linker 1	BC052074|Rftn1|76438|raftlin lipid raft linker 1	NM_181397|Rftn1|76438|raftlin lipid raft linker 1
mm9_v1_chr9_-_107888239_107888272	3.24624	BPTF.p2	NM_026597|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr2_-_27118325_27118417	3.24584	BPTF.p2	AK012893|Vav2|22325|vav 2 oncogene	BC025845|Vav2|22325|vav 2 oncogene
mm9_v1_chr8_-_47702535_47702580	3.23557	BPTF.p2	AK036600|Ccdc111|408022|coiled-coil domain containing 111	BC065112|Ccdc111|408022|coiled-coil domain containing 111	NM_001001184|Ccdc111|408022|coiled-coil domain containing 111	AK083962|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	AK030772|Ccdc111|408022|coiled-coil domain containing 111
mm9_v1_chr17_-_80879792_80879792	3.22281	BPTF.p2	AK140310|Sos1|20662|son of sevenless homolog 1 (Drosophila)	NM_009231|Sos1|20662|son of sevenless homolog 1 (Drosophila)
mm9_v1_chr17_+_66460934_66461036	3.22065	BPTF.p2	AK159820|ORF19|68767|open reading frame 19	AK171737|ORF19|68767|open reading frame 19	AK172673|ORF19|68767|open reading frame 19	AJ304796|ORF19|68767|open reading frame 19	AK149967|ORF19|68767|open reading frame 19	BC025839|ORF19|68767|open reading frame 19	NM_001037757|ORF19|68767|open reading frame 19	AK154400|ORF19|68767|open reading frame 19	AK033616|ORF19|68767|open reading frame 19
mm9_v1_chr17_+_53723450_53723450	3.21972	BPTF.p2	AK030070|Kat2b|18519|K(lysine) acetyltransferase 2B	NM_001190846|Kat2b|18519|K(lysine) acetyltransferase 2B
mm9_v1_chr16_+_33500899_33501016	3.21738	BPTF.p2	AK037342|Zfp148|22661|zinc finger protein 148
mm9_v1_chr13_+_52678805_52678835	3.19613	BPTF.p2	AK049207|Sykb|20963|spleen tyrosine kinase	NM_001198977|Sykb|20963|spleen tyrosine kinase
mm9_v1_chr1_+_136859153_136859176	3.19577	BPTF.p2	AK021213|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	NM_026024|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	AK166098|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)
mm9_v1_chr1_+_175561105_175561244	3.16344	BPTF.p2	AK150817|Pyhin1|236312|pyrin and HIN domain family, member 1	BC107378|Pyhin1|236312|pyrin and HIN domain family, member 1	BC107379|Pyhin1|236312|pyrin and HIN domain family, member 1	AK040884|Pyhin1|236312|pyrin and HIN domain family, member 1
mm9_v1_chr12_+_80309899_80309933	3.16199	BPTF.p2	AK164157|Rdh12|77974|retinol dehydrogenase 12	AK039233|Rdh12|77974|retinol dehydrogenase 12	NM_030017|Rdh12|77974|retinol dehydrogenase 12	AK020927|Rdh12|77974|retinol dehydrogenase 12	BC016204|Rdh12|77974|retinol dehydrogenase 12	BC067213|Rdh12|77974|retinol dehydrogenase 12
mm9_v1_chr15_+_37162790_37162813	3.15525	BPTF.p2	AK002633|Grhl2|252973|grainyhead-like 2 (Drosophila)	NM_026496|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr18_-_39646734_39646900	3.15308	BPTF.p2	AK037733|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	DQ504162|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	HM236293|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13358|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13359|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	NM_008173|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129912|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129913|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X04435|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr3_+_41419561_41419606	3.14674	BPTF.p2	AK040146|Phf17|269424|PHD finger protein 17
mm9_v1_chr13_-_60998747_60998807	3.14563	BPTF.p2	AY034578|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	X15592|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	AK150917|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_001145801|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_007797|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta
mm9_v1_chr1_-_58561631_58561830	3.14226	BPTF.p2	BC015257|Orc2|18393|origin recognition complex, subunit 2	NM_008765|Orc2|18393|origin recognition complex, subunit 2	U27457|Orc2|18393|origin recognition complex, subunit 2	AK048408|Orc2|18393|origin recognition complex, subunit 2	AK133604|Orc2|18393|origin recognition complex, subunit 2	AK146281|Orc2|18393|origin recognition complex, subunit 2	AK146859|Orc2|18393|origin recognition complex, subunit 2	AK051747|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr7_+_127986324_127986492	3.13277	BPTF.p2	AK028524|Eef2k|13631|eukaryotic elongation factor-2 kinase	BC003433|Eef2k|13631|eukaryotic elongation factor-2 kinase	NM_007908|Eef2k|13631|eukaryotic elongation factor-2 kinase
mm9_v1_chr9_+_57385317_57385465	3.12661	BPTF.p2	AK028365|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_001166364|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_175273|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC111883|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC112403|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene
mm9_v1_chr4_+_150294263_150294326	3.12547	BPTF.p2	NM_001077508|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	NM_011612|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	AK019885|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	BC028507|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9
mm9_v1_chr11_-_83388330_83388380	3.12389	BPTF.p2	AK151953|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr11_-_97023157_97023169	3.12102	BPTF.p2	BC004096|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr2_-_169956719_169956719	3.11551	BPTF.p2	AK156475|Zfp217|228913|zinc finger protein 217	NM_001033299|Zfp217|228913|zinc finger protein 217
mm9_v1_chr18_-_78338857_78338857	3.11249	BPTF.p2	AK041979|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	NM_001171011|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1
mm9_v1_chr14_-_66211842_66211926	3.10738	BPTF.p2	NM_028811|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK012072|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK150058|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	BC057453|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK088457|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)
mm9_v1_chr11_-_68821930_68821976	3.09898	BPTF.p2	AK139115|Pfas|237823|phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)	NM_001159519|Pfas|237823|phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)
mm9_v1_chr15_-_76701864_76701885	3.08365	BPTF.p2	BC059071|Zfp251|71591|zinc finger protein 251	NM_001007568|Zfp251|71591|zinc finger protein 251
mm9_v1_chr17_+_40948047_40948124	3.07178	BPTF.p2	AK157847|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF057526|Rhag|19743|Rhesus blood group-associated A glycoprotein	AK143851|Rhag|19743|Rhesus blood group-associated A glycoprotein	NM_011269|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101941|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101942|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103512|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103662|Rhag|19743|Rhesus blood group-associated A glycoprotein	AB015192|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF065395|Rhag|19743|Rhesus blood group-associated A glycoprotein
mm9_v1_chr6_+_50150160_50150179	3.06228	BPTF.p2	AK047380|Mpp6|56524|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm9_v1_chr4_+_134420419_134420535	3.05262	BPTF.p2	BC145805|Rhd|19746|Rh blood group, D antigen	NM_011270|Rhd|19746|Rh blood group, D antigen	AF057524|Rhd|19746|Rh blood group, D antigen	AK089642|Rhd|19746|Rh blood group, D antigen	AF069311|Rhd|19746|Rh blood group, D antigen	AK079335|Rhd|19746|Rh blood group, D antigen	AK171641|Rhd|19746|Rh blood group, D antigen	AB015189|Rhd|19746|Rh blood group, D antigen	AB015190|Rhd|19746|Rh blood group, D antigen	AF047827|Rhd|19746|Rh blood group, D antigen	AK157850|Rhd|19746|Rh blood group, D antigen	AF012430|Rhd|19746|Rh blood group, D antigen
mm9_v1_chr1_-_135586436_135586684	3.05259	BPTF.p2	AK088503|Lax1|240754|lymphocyte transmembrane adaptor 1	AK040834|Lax1|240754|lymphocyte transmembrane adaptor 1	BC042765|Lax1|240754|lymphocyte transmembrane adaptor 1	NM_172842|Lax1|240754|lymphocyte transmembrane adaptor 1	NM_001159649|Lax1|240754|lymphocyte transmembrane adaptor 1
mm9_v1_chr17_-_13185014_13185022	3.04704	BPTF.p2	AK156334|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr3_+_53267587_53267689	3.04504	BPTF.p2	AK034174|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr9_-_107888185_107888220	3.0418	BPTF.p2	BC115538|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK020090|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK076092|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr14_-_51405130_51405204	3.03332	BPTF.p2	BC003272|Ttc5|219022|tetratricopeptide repeat domain 5	BC025610|Ttc5|219022|tetratricopeptide repeat domain 5	AK077874|Ttc5|219022|tetratricopeptide repeat domain 5	BC092074|Ttc5|219022|tetratricopeptide repeat domain 5	AK081214|Ttc5|219022|tetratricopeptide repeat domain 5	AK161279|Ttc5|219022|tetratricopeptide repeat domain 5	AK157777|Ttc5|219022|tetratricopeptide repeat domain 5	AK133953|Ttc5|219022|tetratricopeptide repeat domain 5	BC069946|Ttc5|219022|tetratricopeptide repeat domain 5	AK044781|Ttc5|219022|tetratricopeptide repeat domain 5	NM_001080949|Ttc5|219022|tetratricopeptide repeat domain 5	NM_177625|Ttc5|219022|tetratricopeptide repeat domain 5
mm9_v1_chr13_-_58228079_58228222	3.03045	BPTF.p2	AK004260|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr4_+_135842003_135842015	3.01086	BPTF.p2	AK051031|Zfp46|22704|zinc finger protein 46
mm9_v1_chr11_-_45768992_45769003	3.00725	BPTF.p2	BC115560|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	BC115561|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	AK010876|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	NM_001080969|Thg1l|66628|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm9_v1_chr11_+_96184439_96184443	3.00105	BPTF.p2	NM_001079869|Hoxb3|15410|homeobox B3	S35738|Hoxb3|15410|homeobox B3
mm9_v1_chr5_-_73033990_73033990	2.99514	BPTF.p2	NM_007723|Cnga1|12788|cyclic nucleotide gated channel alpha 1
mm9_v1_chrX_-_103207106_103207254	2.99362	BPTF.p2	AK144696|Magt1|67075|magnesium transporter 1	AK012185|Magt1|67075|magnesium transporter 1	AK013243|Magt1|67075|magnesium transporter 1	AK136622|Magt1|67075|magnesium transporter 1	BC003881|Magt1|67075|magnesium transporter 1	AK018623|Magt1|67075|magnesium transporter 1	AK010320|Magt1|67075|magnesium transporter 1	DQ000005|Magt1|67075|magnesium transporter 1	NM_001190409|Magt1|67075|magnesium transporter 1	NM_025952|Magt1|67075|magnesium transporter 1
mm9_v1_chr17_+_34442837_34442976	2.98686	BPTF.p2	AK155968|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52642|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132165|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132163|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	AK160485|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52641|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X07239|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36940|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90032|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28489|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28490|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36939|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90275|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X00958|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M28408|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr9_-_14849831_14849921	2.98473	BPTF.p2	BC020413|Panx1|55991|pannexin 1	AK089764|Panx1|55991|pannexin 1	AK014033|Panx1|55991|pannexin 1	AK156194|Panx1|55991|pannexin 1	AK053871|Panx1|55991|pannexin 1	BC049074|Panx1|55991|pannexin 1	EU446265|Panx1|55991|pannexin 1	NM_019482|Panx1|55991|pannexin 1
mm9_v1_chr9_-_36534167_36534242	2.98144	BPTF.p2	BC053394|Chek1|12649|checkpoint kinase 1 homolog (S. pombe)	BC037613|Chek1|12649|checkpoint kinase 1 homolog (S. pombe)	AK045336|Chek1|12649|checkpoint kinase 1 homolog (S. pombe)	AK011258|Chek1|12649|checkpoint kinase 1 homolog (S. pombe)	AK033179|Chek1|12649|checkpoint kinase 1 homolog (S. pombe)	AK166675|Chek1|12649|checkpoint kinase 1 homolog (S. pombe)	NM_007691|Chek1|12649|checkpoint kinase 1 homolog (S. pombe)
mm9_v1_chr13_+_24895094_24895151	2.97511	BPTF.p2	BC002217|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr17_+_6877959_6877959	2.96989	BPTF.p2	AB057758|Sytl3|83672|synaptotagmin-like 3	AB057764|Sytl3|83672|synaptotagmin-like 3	AB057765|Sytl3|83672|synaptotagmin-like 3	NM_031395|Sytl3|83672|synaptotagmin-like 3
mm9_v1_chr7_+_148153327_148153327	2.96705	BPTF.p2	NM_026820|Ifitm1|68713|interferon induced transmembrane protein 1
mm9_v1_chr7_+_86040793_86040943	2.96529	BPTF.p2	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr8_-_86217895_86217983	2.9618	BPTF.p2	AK150062|Pkn1|320795|protein kinase N1	AK149649|Pkn1|320795|protein kinase N1	AK089431|Pkn1|320795|protein kinase N1	AK171297|Pkn1|320795|protein kinase N1
mm9_v1_chr12_+_85758140_85758149	2.9472	BPTF.p2	AK009420|Rnf113a2|66381|ring finger protein 113A2	NM_025525|Rnf113a2|66381|ring finger protein 113A2
mm9_v1_chr1_-_130256055_130256293	2.93998	BPTF.p2	AK188642|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK177954|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK180079|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK183692|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK194535|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK210474|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK211618|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK150726|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146896|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC051658|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC057584|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK145520|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146770|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146272|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK088493|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	D86726|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	NM_008567|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC050886|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm9_v1_chr4_+_153516477_153516537	2.93583	BPTF.p2	NM_021499|Wdr8|59002|WD repeat domain 8	AK156969|Wdr8|59002|WD repeat domain 8	AK172690|Wdr8|59002|WD repeat domain 8	AB034911|Wdr8|59002|WD repeat domain 8	AK160331|Wdr8|59002|WD repeat domain 8	AK011773|Wdr8|59002|WD repeat domain 8	BC016120|Wdr8|59002|WD repeat domain 8	AK051688|Wdr8|59002|WD repeat domain 8
mm9_v1_chr6_+_117850357_117850357	2.92416	BPTF.p2	NM_001166432|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr17_-_46381025_46381091	2.92259	BPTF.p2	
mm9_v1_chr2_-_106810547_106810547	2.92218	BPTF.p2	AK076781|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	NM_173750|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene
mm9_v1_chr5_+_23356371_23356439	2.91845	BPTF.p2	AK002390|2700038G22Rik|67194|RIKEN cDNA 2700038G22 gene
mm9_v1_chr3_+_89586320_89586446	2.91539	BPTF.p2	AK211403|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr14_-_48038081_48038081	2.90897	BPTF.p2	AB076696|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	NM_001145949|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	NM_144553|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr2_+_167802175_167802258	2.90796	BPTF.p2	AK179877|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr10_-_83989221_83989289	2.90437	BPTF.p2	AK205593|Ckap4|216197|cytoskeleton-associated protein 4	AK212843|Ckap4|216197|cytoskeleton-associated protein 4	AK217343|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr6_+_52195030_52195080	2.90357	BPTF.p2	U20367|Hoxa11as|15397|HOXA11 antisense RNA (non-protein coding)
mm9_v1_chr17_+_23949101_23949124	2.9028	BPTF.p2	AK081577|Srrm2|75956|serine/arginine repetitive matrix 2
mm9_v1_chr1_+_161974815_161974830	2.90276	BPTF.p2	AK034159|4930523C07Rik|67647|RIKEN cDNA 4930523C07 gene
mm9_v1_chr8_+_90818102_90818135	2.89776	BPTF.p2	NM_001037724|Adcy7|11513|adenylate cyclase 7	AK155831|Adcy7|11513|adenylate cyclase 7	AK154652|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr1_-_44159187_44159306	2.8942	BPTF.p2	BC116881|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	BC119032|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	AK160565|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	NM_029368|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	BC099557|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene
mm9_v1_chr18_+_21159829_21159841	2.8936	BPTF.p2	AB025010|Rnf138|56515|ring finger protein 138	AB025011|Rnf138|56515|ring finger protein 138	NM_019706|Rnf138|56515|ring finger protein 138	NM_207623|Rnf138|56515|ring finger protein 138
mm9_v1_chr10_-_53349752_53349783	2.88701	BPTF.p2	AK139112|Mcm9|71567|minichromosome maintenance complex component 9	AK046636|Mcm9|71567|minichromosome maintenance complex component 9
mm9_v1_chr2_-_118375365_118375421	2.88181	BPTF.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr9_-_43951401_43951528	2.86829	BPTF.p2	
mm9_v1_chr7_+_16335718_16335725	2.86745	BPTF.p2	NM_145709|Obox5|252829|oocyte specific homeobox 5	BC052664|Obox5|252829|oocyte specific homeobox 5
mm9_v1_chr18_-_4352916_4352956	2.86118	BPTF.p2	AK157123|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK140334|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK149624|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK149846|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	D13759|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	NM_007746|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8	AK171403|Map3k8|26410|mitogen-activated protein kinase kinase kinase 8
mm9_v1_chr19_+_11482121_11482202	2.84991	BPTF.p2	AK157137|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	NM_029499|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AK151045|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AK017928|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AK172650|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	AF237914|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C	BC027496|Ms4a4c|64380|membrane-spanning 4-domains, subfamily A, member 4C
mm9_v1_chr9_-_96632093_96632093	2.84734	BPTF.p2	AK044467|Zbtb38|245007|zinc finger and BTB domain containing 38	NM_175537|Zbtb38|245007|zinc finger and BTB domain containing 38
mm9_v1_chr7_-_80686630_80686631	2.84397	BPTF.p2	AK133596|Chd2|244059|chromodomain helicase DNA binding protein 2	AK040559|Chd2|244059|chromodomain helicase DNA binding protein 2	AK132638|Chd2|244059|chromodomain helicase DNA binding protein 2	AK136686|Chd2|244059|chromodomain helicase DNA binding protein 2	NM_001081345|Chd2|244059|chromodomain helicase DNA binding protein 2
mm9_v1_chr3_-_98143778_98143903	2.83762	BPTF.p2	BC086668|Phgdh|236539|3-phosphoglycerate dehydrogenase	BC110673|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK147946|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK076815|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK169684|Phgdh|236539|3-phosphoglycerate dehydrogenase	NM_016966|Phgdh|236539|3-phosphoglycerate dehydrogenase
mm9_v1_chr15_-_96529998_96530181	2.83731	BPTF.p2	BC041108|Slc38a2|67760|solute carrier family 38, member 2	BC027259|Slc38a2|67760|solute carrier family 38, member 2	AK129342|Slc38a2|67760|solute carrier family 38, member 2	BC048178|Slc38a2|67760|solute carrier family 38, member 2	NM_175121|Slc38a2|67760|solute carrier family 38, member 2	AK017145|Slc38a2|67760|solute carrier family 38, member 2	AK030917|Slc38a2|67760|solute carrier family 38, member 2	AK031615|Slc38a2|67760|solute carrier family 38, member 2	AK047403|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr9_-_88626434_88626600	2.83232	BPTF.p2	AK165576|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d	BC027536|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d
mm9_v1_chr1_+_136859183_136859192	2.83127	BPTF.p2	AK012565|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	BC029213|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)
mm9_v1_chr8_-_73796243_73796274	2.82933	BPTF.p2	BC003935|Haus8|76478|4HAUS augmin-like complex, subunit 8	AK010398|Haus8|76478|4HAUS augmin-like complex, subunit 8
mm9_v1_chr14_-_56739353_56739461	2.81554	BPTF.p2	M36901|Gzme|14942|granzyme E	X14093|Gzme|14942|granzyme E	J03256|Gzme|14942|granzyme E	NM_010373|Gzme|14942|granzyme E
mm9_v1_chr11_-_69479553_69479654	2.79601	BPTF.p2	NM_009853|Cd68|12514|CD68 antigen	AK170443|Cd68|12514|CD68 antigen	BC021637|Cd68|12514|CD68 antigen	AK002264|Cd68|12514|CD68 antigen	X68273|Cd68|12514|CD68 antigen
mm9_v1_chr17_+_35404109_35404141	2.79327	BPTF.p2	
mm9_v1_chr12_-_103196366_103196464	2.78207	BPTF.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr17_-_37095372_37095414	2.77797	BPTF.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr1_+_19202046_19202134	2.77623	BPTF.p2	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr15_+_81494375_81494386	2.76901	BPTF.p2	AK145560|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237000|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237001|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237002|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr6_+_29222664_29222676	2.75919	BPTF.p2	AK144676|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	AK009377|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr12_-_80397239_80397289	2.75766	BPTF.p2	AK220333|Zfyve26|211978|zinc finger, FYVE domain containing 26	BC141359|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK132344|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK041668|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK135518|Zfyve26|211978|zinc finger, FYVE domain containing 26	NM_001008550|Zfyve26|211978|zinc finger, FYVE domain containing 26
mm9_v1_chr9_+_77765170_77765271	2.75429	BPTF.p2	AK031743|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK162451|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	NM_134255|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK051580|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK045274|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085663|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085696|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK028761|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK167755|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168360|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK088153|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168987|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	BC022911|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm9_v1_chrX_+_7184223_7184271	2.75234	BPTF.p2	BC057653|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	NM_019582|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	AF192497|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	AK044695|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	BC051413|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	BC043482|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit	AJ579852|Cacna1f|54652|calcium channel, voltage-dependent, alpha 1F subunit
mm9_v1_chr2_+_90585526_90585673	2.74438	BPTF.p2	NM_018828|Fnbp4|55935|formin binding protein 4	U40750|Fnbp4|55935|formin binding protein 4
mm9_v1_chr17_+_66460884_66460915	2.73827	BPTF.p2	NM_026833|ORF19|68767|open reading frame 19
mm9_v1_chr12_-_77470450_77470546	2.73482	BPTF.p2	NM_001172104|Zbtb25|109929|zinc finger and BTB domain containing 25	AK137486|Zbtb25|109929|zinc finger and BTB domain containing 25	NM_028356|Zbtb25|109929|zinc finger and BTB domain containing 25
mm9_v1_chr5_+_104728299_104728323	2.72606	BPTF.p2	NM_008318|Ibsp|15891|integrin binding sialoprotein	AK132371|Ibsp|15891|integrin binding sialoprotein	L23801|Ibsp|15891|integrin binding sialoprotein	BC045143|Ibsp|15891|integrin binding sialoprotein	AK162640|Ibsp|15891|integrin binding sialoprotein	L20232|Ibsp|15891|integrin binding sialoprotein
mm9_v1_chr2_-_7317824_7317824	2.72459	BPTF.p2	AK160861|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110231|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr9_-_44226073_44226112	2.72054	BPTF.p2	BC096560|Ccdc84|382073|coiled-coil domain containing 84	BC055929|Ccdc84|382073|coiled-coil domain containing 84	NM_201372|Ccdc84|382073|coiled-coil domain containing 84	AK171754|Ccdc84|382073|coiled-coil domain containing 84	AK052757|Ccdc84|382073|coiled-coil domain containing 84	BC116877|Ccdc84|382073|coiled-coil domain containing 84	BC116879|Ccdc84|382073|coiled-coil domain containing 84	BC144712|Ccdc84|382073|coiled-coil domain containing 84	BC144713|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr19_-_27463532_27463668	2.71908	BPTF.p2	
mm9_v1_chr9_-_119893775_119893775	2.71908	BPTF.p2	BC050066|Csrnp1|215418|cysteine-serine-rich nuclear protein 1	NM_153287|Csrnp1|215418|cysteine-serine-rich nuclear protein 1
mm9_v1_chr7_-_90883999_90884032	2.71769	BPTF.p2	AF175292|Il16|16170|interleukin 16	NM_010551|Il16|16170|interleukin 16	AK220455|Il16|16170|interleukin 16	BC058709|Il16|16170|interleukin 16
mm9_v1_chr17_+_21520684_21520739	2.71301	BPTF.p2	AK043955|Zfp677|210503|zinc finger protein 677	NM_172486|Zfp677|210503|zinc finger protein 677	BC057947|Zfp677|210503|zinc finger protein 677
mm9_v1_chr5_+_122822549_122822598	2.71298	BPTF.p2	AK087968|Gpn3|68080|GPN-loop GTPase 3	AK080720|Gpn3|68080|GPN-loop GTPase 3	AK146783|Gpn3|68080|GPN-loop GTPase 3	AK016996|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr11_-_94154354_94154488	2.70855	BPTF.p2	BC055921|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)
mm9_v1_chr16_-_23988680_23988725	2.7071	BPTF.p2	D38377|Bcl6|12053|B-cell leukemia/lymphoma 6	BC052315|Bcl6|12053|B-cell leukemia/lymphoma 6	NM_009744|Bcl6|12053|B-cell leukemia/lymphoma 6	AK039228|Bcl6|12053|B-cell leukemia/lymphoma 6	AK036975|Bcl6|12053|B-cell leukemia/lymphoma 6	AK151229|Bcl6|12053|B-cell leukemia/lymphoma 6
mm9_v1_chr11_-_109334465_109334613	2.70259	BPTF.p2	AK170472|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	BC017129|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	NM_134038|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chr15_+_81494352_81494363	2.70234	BPTF.p2	AK146632|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr4_+_44313764_44313857	2.70127	BPTF.p2	AK137000|Melk|17279|maternal embryonic leucine zipper kinase	AK161029|Melk|17279|maternal embryonic leucine zipper kinase	AK011932|Melk|17279|maternal embryonic leucine zipper kinase	NM_010790|Melk|17279|maternal embryonic leucine zipper kinase	AK010498|Melk|17279|maternal embryonic leucine zipper kinase	AK164138|Melk|17279|maternal embryonic leucine zipper kinase	BC055065|Melk|17279|maternal embryonic leucine zipper kinase	AK129076|Melk|17279|maternal embryonic leucine zipper kinase	X95351|Melk|17279|maternal embryonic leucine zipper kinase	AK145021|Melk|17279|maternal embryonic leucine zipper kinase	L76158|Melk|17279|maternal embryonic leucine zipper kinase
mm9_v1_chr15_+_99803210_99803320	2.69892	BPTF.p2	NM_001024526|Larp4|207214|La ribonucleoprotein domain family, member 4	AK165392|Larp4|207214|La ribonucleoprotein domain family, member 4	AK172198|Larp4|207214|La ribonucleoprotein domain family, member 4	AK049756|Larp4|207214|La ribonucleoprotein domain family, member 4	BC075726|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr19_-_34240392_34240542	2.69208	BPTF.p2	BC003460|Ankrd22|52024|ankyrin repeat domain 22	AK017408|Ankrd22|52024|ankyrin repeat domain 22	AK037242|Ankrd22|52024|ankyrin repeat domain 22	AK017360|Ankrd22|52024|ankyrin repeat domain 22	NM_024204|Ankrd22|52024|ankyrin repeat domain 22	AK012869|Ankrd22|52024|ankyrin repeat domain 22
mm9_v1_chr4_+_135841981_135841996	2.68926	BPTF.p2	AK053652|Zfp46|22704|zinc finger protein 46	NM_009557|Zfp46|22704|zinc finger protein 46	AK173240|Zfp46|22704|zinc finger protein 46
mm9_v1_chr4_+_106721017_106721031	2.68791	BPTF.p2	AK144320|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr6_+_129347314_129347343	2.68641	BPTF.p2	BC064054|Clec1b|56760|C-type lectin domain family 1, member b	NM_019985|Clec1b|56760|C-type lectin domain family 1, member b	AK007925|Clec1b|56760|C-type lectin domain family 1, member b
mm9_v1_chr1_+_138311847_138311988	2.68564	BPTF.p2	AK004833|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	NM_026500|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK013179|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK133731|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK076462|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	BC023840|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
mm9_v1_chr13_+_43497279_43497424	2.6765	BPTF.p2	AK140839|Nol7|70078|nucleolar protein 7
mm9_v1_chr3_+_102975621_102975695	2.66405	BPTF.p2	NM_026602|Bcas2|68183|breast carcinoma amplified sequence 2	BC013627|Bcas2|68183|breast carcinoma amplified sequence 2	BC037062|Bcas2|68183|breast carcinoma amplified sequence 2	AK018786|Bcas2|68183|breast carcinoma amplified sequence 2	AK005825|Bcas2|68183|breast carcinoma amplified sequence 2	AK020098|Bcas2|68183|breast carcinoma amplified sequence 2	AK153513|Bcas2|68183|breast carcinoma amplified sequence 2	AK166967|Bcas2|68183|breast carcinoma amplified sequence 2	AY043239|Bcas2|68183|breast carcinoma amplified sequence 2	BC023382|Bcas2|68183|breast carcinoma amplified sequence 2
mm9_v1_chr8_-_113862056_113862142	2.66144	BPTF.p2	AK018636|Mlkl|74568|mixed lineage kinase domain-like	BC023755|Mlkl|74568|mixed lineage kinase domain-like
mm9_v1_chr2_-_165225861_165225904	2.66131	BPTF.p2	BC020160|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	AK014751|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	NM_029021|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	AK042271|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene
mm9_v1_chr16_-_4559511_4559853	2.65708	BPTF.p2	AK053091|Tcfap4|83383|transcription factor AP4	BC054777|Tcfap4|83383|transcription factor AP4	BC047270|Tcfap4|83383|transcription factor AP4	AF161262|Tcfap4|83383|transcription factor AP4	NM_031182|Tcfap4|83383|transcription factor AP4	AK166424|Tcfap4|83383|transcription factor AP4
mm9_v1_chr5_-_134705423_134705497	2.65676	BPTF.p2	L11455|Ncf1|17969|neutrophil cytosolic factor 1	BC055836|Ncf1|17969|neutrophil cytosolic factor 1	AK152386|Ncf1|17969|neutrophil cytosolic factor 1	AK151593|Ncf1|17969|neutrophil cytosolic factor 1	AK149668|Ncf1|17969|neutrophil cytosolic factor 1	AK171559|Ncf1|17969|neutrophil cytosolic factor 1	AK150945|Ncf1|17969|neutrophil cytosolic factor 1	AK151316|Ncf1|17969|neutrophil cytosolic factor 1	AK152992|Ncf1|17969|neutrophil cytosolic factor 1	AK162308|Ncf1|17969|neutrophil cytosolic factor 1	AK162623|Ncf1|17969|neutrophil cytosolic factor 1	AK170462|Ncf1|17969|neutrophil cytosolic factor 1	AB002663|Ncf1|17969|neutrophil cytosolic factor 1	AK149619|Ncf1|17969|neutrophil cytosolic factor 1	AK149732|Ncf1|17969|neutrophil cytosolic factor 1	NM_010876|Ncf1|17969|neutrophil cytosolic factor 1
mm9_v1_chrX_+_151696991_151697138	2.65457	BPTF.p2	AK168713|Acot9|56360|acyl-CoA thioesterase 9	NM_019736|Acot9|56360|acyl-CoA thioesterase 9	AK076513|Acot9|56360|acyl-CoA thioesterase 9	BC021763|Acot9|56360|acyl-CoA thioesterase 9	AK002892|Acot9|56360|acyl-CoA thioesterase 9	AK009717|Acot9|56360|acyl-CoA thioesterase 9	AK088082|Acot9|56360|acyl-CoA thioesterase 9	AK170876|Acot9|56360|acyl-CoA thioesterase 9	AJ238893|Acot9|56360|acyl-CoA thioesterase 9	AB028898|Acot9|56360|acyl-CoA thioesterase 9
mm9_v1_chr19_+_42007957_42008102	2.65426	BPTF.p2	NM_023740|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AK151505|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AK168042|Zdhhc16|74168|zinc finger, DHHC domain containing 16	BC010835|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AF176814|Zdhhc16|74168|zinc finger, DHHC domain containing 16	AK183781|Zdhhc16|74168|zinc finger, DHHC domain containing 16
mm9_v1_chr8_+_35178083_35178147	2.65266	BPTF.p2	EU721729|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	NM_001126314|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147844|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147849|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	EU518496|Mboat4|234155|membrane bound O-acyltransferase domain containing 4
mm9_v1_chr19_-_3903069_3903081	2.64768	BPTF.p2	AF218254|Tcirg1|27060|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
mm9_v1_chr3_+_63780058_63780135	2.64743	BPTF.p2	AK143197|Gmps|229363|guanine monophosphate synthetase	NM_001033300|Gmps|229363|guanine monophosphate synthetase	AK169701|Gmps|229363|guanine monophosphate synthetase	AK169043|Gmps|229363|guanine monophosphate synthetase	AK167857|Gmps|229363|guanine monophosphate synthetase	AK049755|Gmps|229363|guanine monophosphate synthetase	BC138411|Gmps|229363|guanine monophosphate synthetase	BC138412|Gmps|229363|guanine monophosphate synthetase	AK168239|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr18_-_46397319_46397437	2.64665	BPTF.p2	AK131923|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	AK077685|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit
mm9_v1_chrX_-_50467567_50467581	2.63491	BPTF.p2	BC051666|Plac1|56096|placental specific protein 1	AF234653|Plac1|56096|placental specific protein 1	AF250838|Plac1|56096|placental specific protein 1	AK005501|Plac1|56096|placental specific protein 1	NM_019538|Plac1|56096|placental specific protein 1
mm9_v1_chr1_+_136302531_136302616	2.63413	BPTF.p2	AK005159|Cyb5r1|72017|cytochrome b5 reductase 1	NM_028057|Cyb5r1|72017|cytochrome b5 reductase 1	AK167178|Cyb5r1|72017|cytochrome b5 reductase 1	BC024618|Cyb5r1|72017|cytochrome b5 reductase 1	AK159663|Cyb5r1|72017|cytochrome b5 reductase 1	AK049717|Cyb5r1|72017|cytochrome b5 reductase 1
mm9_v1_chr10_+_26492282_26492396	2.62659	BPTF.p2	BC030858|Arhgap18|73910|Rho GTPase activating protein 18	NM_176837|Arhgap18|73910|Rho GTPase activating protein 18	AK087800|Arhgap18|73910|Rho GTPase activating protein 18	AK014728|Arhgap18|73910|Rho GTPase activating protein 18
mm9_v1_chr5_-_75440586_75440675	2.62534	BPTF.p2	BC048435|Chic2|74277|cysteine-rich hydrophobic domain 2	AK172289|Chic2|74277|cysteine-rich hydrophobic domain 2	AK006962|Chic2|74277|cysteine-rich hydrophobic domain 2	NM_028850|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr19_+_56623108_56623165	2.62239	BPTF.p2	AK004564|Nhlrc2|66866|NHL repeat containing 2	AK002650|Nhlrc2|66866|NHL repeat containing 2
mm9_v1_chr13_+_27248667_27248686	2.62214	BPTF.p2	AF525161|Prl3d3|215029|prolactin family 3, subfamily d, member 3	NM_172156|Prl3d3|215029|prolactin family 3, subfamily d, member 3	BC068253|Prl3d3|215029|prolactin family 3, subfamily d, member 3
mm9_v1_chr11_+_117623703_117623821	2.62033	BPTF.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr13_-_67738689_67738740	2.61818	BPTF.p2	AK138962|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene	NM_183146|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene	BC098180|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene	AK040978|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene
mm9_v1_chr5_-_64360058_64360140	2.60373	BPTF.p2	AK133845|Rell1|100532|RELT-like 1	AK159944|Rell1|100532|RELT-like 1	AK161061|Rell1|100532|RELT-like 1	BC031198|Rell1|100532|RELT-like 1	BC066137|Rell1|100532|RELT-like 1	BC066160|Rell1|100532|RELT-like 1	AK140108|Rell1|100532|RELT-like 1	NM_145923|Rell1|100532|RELT-like 1
mm9_v1_chr19_-_25036047_25036105	2.59302	BPTF.p2	BC018472|Cbwd1|226043|COBW domain containing 1	AK076027|Cbwd1|226043|COBW domain containing 1	BC053745|Cbwd1|226043|COBW domain containing 1	AK132291|Cbwd1|226043|COBW domain containing 1	NM_146097|Cbwd1|226043|COBW domain containing 1
mm9_v1_chr11_+_101443690_101443814	2.58587	BPTF.p2	BC022145|Tmem106a|217203|transmembrane protein 106A
mm9_v1_chr12_+_114727721_114727775	2.58506	BPTF.p2	AK029742|Adam6b|238405|a disintegrin and metallopeptidase domain 6B	AK076580|Adam6b|238405|a disintegrin and metallopeptidase domain 6B	BC111877|Adam6b|238405|a disintegrin and metallopeptidase domain 6B	NM_001009545|Adam6b|238405|a disintegrin and metallopeptidase domain 6B
mm9_v1_chr11_-_100683830_100683883	2.58011	BPTF.p2	AY040231|Stat5b|20851|signal transducer and activator of transcription 5B	AY042906|Stat5b|20851|signal transducer and activator of transcription 5B	AY044901|Stat5b|20851|signal transducer and activator of transcription 5B	AY044902|Stat5b|20851|signal transducer and activator of transcription 5B	AY044903|Stat5b|20851|signal transducer and activator of transcription 5B	U21110|Stat5b|20851|signal transducer and activator of transcription 5B	AK088966|Stat5b|20851|signal transducer and activator of transcription 5B	AK154014|Stat5b|20851|signal transducer and activator of transcription 5B	NM_011489|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chrX_+_12869324_12869430	2.57685	BPTF.p2	AK211517|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr2_-_44965866_44965983	2.57158	BPTF.p2	AK122312|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535781|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535783|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr5_-_115584921_115584983	2.57079	BPTF.p2	AK045128|Unc119b|106840|unc-119 homolog B (C. elegans)	BC115529|Unc119b|106840|unc-119 homolog B (C. elegans)	BC112388|Unc119b|106840|unc-119 homolog B (C. elegans)	AK082614|Unc119b|106840|unc-119 homolog B (C. elegans)	NM_175352|Unc119b|106840|unc-119 homolog B (C. elegans)
mm9_v1_chr9_+_124036265_124036352	2.56449	BPTF.p2	AK154595|Ccr5|12774|chemokine (C-C motif) receptor 5	NM_009917|Ccr5|12774|chemokine (C-C motif) receptor 5	AK141906|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155632|Ccr5|12774|chemokine (C-C motif) receptor 5	AK170303|Ccr5|12774|chemokine (C-C motif) receptor 5	D83648|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155628|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155867|Ccr5|12774|chemokine (C-C motif) receptor 5	X94151|Ccr5|12774|chemokine (C-C motif) receptor 5	BC105643|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103574|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103586|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103587|Ccr5|12774|chemokine (C-C motif) receptor 5	U47036|Ccr5|12774|chemokine (C-C motif) receptor 5
mm9_v1_chr7_-_53970378_53970477	2.56394	BPTF.p2	M25467|Saa3|20210|serum amyloid A 3	X03479|Saa3|20210|serum amyloid A 3
mm9_v1_chr18_+_14941735_14941757	2.56064	BPTF.p2	AK012135|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001100449|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr9_+_62189683_62189711	2.55796	BPTF.p2	
mm9_v1_chr8_+_74012001_74012001	2.55477	BPTF.p2	AF361482|Gtpbp3|70359|GTP binding protein 3	NM_032544|Gtpbp3|70359|GTP binding protein 3
mm9_v1_chr4_+_154927575_154927585	2.55336	BPTF.p2	AK209108|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK213242|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK217766|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK219535|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr10_-_129717244_129717295	2.55256	BPTF.p2	BC042639|Neurod4|11923|neurogenic differentiation 4	AK012183|Neurod4|11923|neurogenic differentiation 4	BC054391|Neurod4|11923|neurogenic differentiation 4	NM_007501|Neurod4|11923|neurogenic differentiation 4
mm9_v1_chr1_-_88284715_88284736	2.55134	BPTF.p2	AF044602|Nmur1|14767|neuromedin U receptor 1	NM_010341|Nmur1|14767|neuromedin U receptor 1	BC120822|Nmur1|14767|neuromedin U receptor 1	BC137775|Nmur1|14767|neuromedin U receptor 1
mm9_v1_chr7_-_134040741_134040937	2.5511	BPTF.p2	AK004043|Tmem219|68742|transmembrane protein 219	BC046763|Tmem219|68742|transmembrane protein 219
mm9_v1_chr6_+_124989841_124989878	2.54876	BPTF.p2	AK046126|Ing4|28019|inhibitor of growth family, member 4	AK050522|Ing4|28019|inhibitor of growth family, member 4	AK031633|Ing4|28019|inhibitor of growth family, member 4	AK002821|Ing4|28019|inhibitor of growth family, member 4	AK009267|Ing4|28019|inhibitor of growth family, member 4	NM_133345|Ing4|28019|inhibitor of growth family, member 4	BC009127|Ing4|28019|inhibitor of growth family, member 4	AY035880|Ing4|28019|inhibitor of growth family, member 4	AY035881|Ing4|28019|inhibitor of growth family, member 4	AY036107|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr11_-_97213379_97213390	2.5456	BPTF.p2	AK038894|Gpr179|217143|G protein-coupled receptor 179	NM_001081220|Gpr179|217143|G protein-coupled receptor 179	AK030625|Gpr179|217143|G protein-coupled receptor 179
mm9_v1_chr3_+_53267715_53267853	2.53904	BPTF.p2	AK087909|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK038404|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	NM_173382|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK012908|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK161440|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr11_-_46202942_46203016	2.5371	BPTF.p2	BC128374|Itk|16428|IL2-inducible T-cell kinase	BC128375|Itk|16428|IL2-inducible T-cell kinase	D14042|Itk|16428|IL2-inducible T-cell kinase	BC028478|Itk|16428|IL2-inducible T-cell kinase	AK020772|Itk|16428|IL2-inducible T-cell kinase	AK079693|Itk|16428|IL2-inducible T-cell kinase	AK153613|Itk|16428|IL2-inducible T-cell kinase	AK153692|Itk|16428|IL2-inducible T-cell kinase	L05631|Itk|16428|IL2-inducible T-cell kinase	L10628|Itk|16428|IL2-inducible T-cell kinase	AK083380|Itk|16428|IL2-inducible T-cell kinase	L00619|Itk|16428|IL2-inducible T-cell kinase	NM_010583|Itk|16428|IL2-inducible T-cell kinase
mm9_v1_chrX_+_104284572_104284678	2.53667	BPTF.p2	AK038124|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK041351|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK088234|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	NM_172435|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	BC053707|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10
mm9_v1_chr7_-_55237665_55237665	2.5292	BPTF.p2	AY042194|Mrgpra4|235854|MAS-related GPR, member A4	NM_153524|Mrgpra4|235854|MAS-related GPR, member A4
mm9_v1_chr2_-_35316760_35317051	2.52725	BPTF.p2	BC006810|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK088605|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M26925|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M85153|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AF297615|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_001145821|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_010283|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK004753|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK159087|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3
mm9_v1_chr17_+_48403658_48403738	2.51912	BPTF.p2	AK156085|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AK077228|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_001033922|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_001163795|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_001163796|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	NM_172623|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	BC117091|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	BC137666|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY465530|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY465531|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY465532|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ186654|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ186655|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	AY557629|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ087185|Treml4|224840|triggering receptor expressed on myeloid cells-like 4	DQ087186|Treml4|224840|triggering receptor expressed on myeloid cells-like 4
mm9_v1_chr9_-_88614635_88614635	2.5184	BPTF.p2	NM_001128601|Gm2382|100039707|predicted gene 2382
mm9_v1_chr4_+_46485096_46485220	2.5175	BPTF.p2	
mm9_v1_chr19_-_24355054_24355107	2.51218	BPTF.p2	BC058533|Fxn|14297|frataxin	BC125337|Fxn|14297|frataxin	BC132337|Fxn|14297|frataxin	NM_008044|Fxn|14297|frataxin	U95736|Fxn|14297|frataxin	AK160458|Fxn|14297|frataxin	AK148147|Fxn|14297|frataxin
mm9_v1_chr18_+_89141181_89141199	2.5081	BPTF.p2	AF265232|Rttn|246102|rotatin	NM_175542|Rttn|246102|rotatin	AK083016|Rttn|246102|rotatin	AK141510|Rttn|246102|rotatin
mm9_v1_chr3_-_106592919_106593066	2.49478	BPTF.p2	BC052905|Cd53|12508|CD53 antigen	AK160326|Cd53|12508|CD53 antigen	BC021310|Cd53|12508|CD53 antigen	AK156510|Cd53|12508|CD53 antigen	NM_007651|Cd53|12508|CD53 antigen
mm9_v1_chr9_-_96233411_96233654	2.49392	BPTF.p2	AK217555|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK213033|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK205378|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK217181|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK178890|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK181142|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK185963|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK212665|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK214140|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK216038|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218295|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide	AK218384|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr15_+_97622785_97622875	2.49278	BPTF.p2	AK195068|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK196553|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK214093|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1	AK216369|Slc48a1|67739|solute carrier family 48 (heme transporter), member 1
mm9_v1_chr6_+_140572000_140572034	2.49192	BPTF.p2	BC025467|Aebp2|11569|AE binding protein 2
mm9_v1_chr5_+_119214935_119215085	2.48555	BPTF.p2	AK083611|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chrX_+_156146532_156146595	2.48366	BPTF.p2	AK030839|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_021389|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK004636|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK020782|Sh3kbp1|58194|SH3-domain kinase binding protein 1	BC052863|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr7_+_50663608_50663649	2.47945	BPTF.p2	AK156766|Siglecg|243958|sialic acid binding Ig-like lectin G	AK036698|Siglecg|243958|sialic acid binding Ig-like lectin G	BC114981|Siglecg|243958|sialic acid binding Ig-like lectin G	AK042488|Siglecg|243958|sialic acid binding Ig-like lectin G	NM_172900|Siglecg|243958|sialic acid binding Ig-like lectin G
mm9_v1_chr8_+_13869640_13869740	2.47446	BPTF.p2	NM_181854|Zfp828|101994|zinc finger protein 828	AK132164|Zfp828|101994|zinc finger protein 828	AK170835|Zfp828|101994|zinc finger protein 828	AK139963|Zfp828|101994|zinc finger protein 828	AK133990|Zfp828|101994|zinc finger protein 828	BC028991|Zfp828|101994|zinc finger protein 828	AK129444|Zfp828|101994|zinc finger protein 828
mm9_v1_chrX_+_103320051_103320105	2.47424	BPTF.p2	AK030847|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK040753|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr3_-_95161071_95161127	2.46304	BPTF.p2	AK135833|Setdb1|84505|SET domain, bifurcated 1	BC079537|Setdb1|84505|SET domain, bifurcated 1	AF091628|Setdb1|84505|SET domain, bifurcated 1	AF546078|Setdb1|84505|SET domain, bifurcated 1	AY091600|Setdb1|84505|SET domain, bifurcated 1	BC060173|Setdb1|84505|SET domain, bifurcated 1	AK132202|Setdb1|84505|SET domain, bifurcated 1	NM_001163641|Setdb1|84505|SET domain, bifurcated 1	NM_001163642|Setdb1|84505|SET domain, bifurcated 1	NM_018877|Setdb1|84505|SET domain, bifurcated 1
mm9_v1_chr11_+_82765567_82765652	2.46296	BPTF.p2	AK171886|Slfn5|327978|schlafen 5	AK036486|Slfn5|327978|schlafen 5	NM_183201|Slfn5|327978|schlafen 5	AK039815|Slfn5|327978|schlafen 5	AK040359|Slfn5|327978|schlafen 5
mm9_v1_chr11_-_34647110_34647142	2.4606	BPTF.p2	AK011138|Ccdc99|70385|coiled-coil domain containing 99	BC006674|Ccdc99|70385|coiled-coil domain containing 99	AK012927|Ccdc99|70385|coiled-coil domain containing 99	NM_027411|Ccdc99|70385|coiled-coil domain containing 99
mm9_v1_chr11_+_80022611_80022825	2.45857	BPTF.p2	AK028597|Rhot1|59040|ras homolog gene family, member T1	AK078955|Rhot1|59040|ras homolog gene family, member T1	AK138830|Rhot1|59040|ras homolog gene family, member T1	AK041119|Rhot1|59040|ras homolog gene family, member T1	BC055823|Rhot1|59040|ras homolog gene family, member T1	BC058350|Rhot1|59040|ras homolog gene family, member T1	AK053263|Rhot1|59040|ras homolog gene family, member T1	AK043323|Rhot1|59040|ras homolog gene family, member T1	AK141621|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr19_-_60302398_60302548	2.45747	BPTF.p2	BC061459|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK162079|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr3_-_41546402_41546435	2.4561	BPTF.p2	BC043136|Sclt1|67161|sodium channel and clathrin linker 1	BC060271|Sclt1|67161|sodium channel and clathrin linker 1	AK083894|Sclt1|67161|sodium channel and clathrin linker 1	AK016469|Sclt1|67161|sodium channel and clathrin linker 1	NM_001081411|Sclt1|67161|sodium channel and clathrin linker 1
mm9_v1_chr14_-_64162744_64162804	2.45012	BPTF.p2	BC046275|Mtmr9|210376|myotubularin related protein 9	NM_177594|Mtmr9|210376|myotubularin related protein 9	AK035026|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr12_+_111723922_111723992	2.44993	BPTF.p2	AK031584|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	NM_001081457|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	NM_001081458|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	NM_012023|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	BC003979|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr5_-_138628389_138628461	2.4495	BPTF.p2	AK207383|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC058583|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_009315|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK154867|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr6_+_29222487_29222646	2.44904	BPTF.p2	NM_001190461|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	NM_023516|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr6_+_127403631_127403740	2.44898	BPTF.p2	AK133697|Parp11|101187|poly (ADP-ribose) polymerase family, member 11	BC040269|Parp11|101187|poly (ADP-ribose) polymerase family, member 11	NM_181402|Parp11|101187|poly (ADP-ribose) polymerase family, member 11
mm9_v1_chr3_+_95330700_95330810	2.44459	BPTF.p2	AK028366|Ctss|13040|cathepsin S	NM_021281|Ctss|13040|cathepsin S	AJ002386|Ctss|13040|cathepsin S	AK152191|Ctss|13040|cathepsin S	AF038546|Ctss|13040|cathepsin S	AK150274|Ctss|13040|cathepsin S	BC011104|Ctss|13040|cathepsin S	BC002125|Ctss|13040|cathepsin S
mm9_v1_chr5_-_123214252_123214302	2.43636	BPTF.p2	AF453383|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	BC023103|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_145358|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr1_+_173697246_173697357	2.42966	BPTF.p2	AK020012|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK156445|Slamf1|27218|signaling lymphocytic activation molecule family member 1	NM_013730|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK172138|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK037780|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK036429|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF160990|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149791|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149792|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117095|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117099|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196796|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196797|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196798|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196799|Slamf1|27218|signaling lymphocytic activation molecule family member 1
mm9_v1_chr8_-_27109536_27109553	2.42901	BPTF.p2	
mm9_v1_chr5_+_66154740_66154759	2.40434	BPTF.p2	BC054549|N4bp2|333789|NEDD4 binding protein 2	NM_001024917|N4bp2|333789|NEDD4 binding protein 2
mm9_v1_chr11_-_79344055_79344121	2.40349	BPTF.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr9_+_74696269_74696406	2.40228	BPTF.p2	AK050237|Onecut1|15379|one cut domain, family member 1	AK051235|Onecut1|15379|one cut domain, family member 1	BC023444|Onecut1|15379|one cut domain, family member 1
mm9_v1_chr10_-_31134240_31134240	2.3955	BPTF.p2	NM_011509|Gm3258|100041294|predicted gene 3258
mm9_v1_chr5_+_115956682_115956792	2.39221	BPTF.p2	AK171226|Pxn|19303|paxillin	AK148060|Pxn|19303|paxillin	NM_011223|Pxn|19303|paxillin	NM_133915|Pxn|19303|paxillin	AK149933|Pxn|19303|paxillin	AK171436|Pxn|19303|paxillin	BC025493|Pxn|19303|paxillin	AK167299|Pxn|19303|paxillin	AF293882|Pxn|19303|paxillin
mm9_v1_chr16_+_91465283_91465348	2.39168	BPTF.p2	AK162627|A930006K02Rik|78433|RIKEN cDNA A930006K02 gene	AK038602|A930006K02Rik|78433|RIKEN cDNA A930006K02 gene
mm9_v1_chr14_-_70999625_70999666	2.38957	BPTF.p2	NM_194345|Fam160b2|239170|family with sequence similarity 160, member B2	BC050861|Fam160b2|239170|family with sequence similarity 160, member B2
mm9_v1_chr11_-_114795651_114795699	2.38468	BPTF.p2	AK170613|Cd300lb|217304|CD300 antigen like family member B	AK169466|Cd300lb|217304|CD300 antigen like family member B	AK154359|Cd300lb|217304|CD300 antigen like family member B	NM_199221|Cd300lb|217304|CD300 antigen like family member B
mm9_v1_chr3_+_96433850_96433878	2.38395	BPTF.p2	NM_001102407|Rbm8a|60365|RNA binding motif protein 8a	NM_025875|Rbm8a|60365|RNA binding motif protein 8a	AK009953|Rbm8a|60365|RNA binding motif protein 8a	AK010284|Rbm8a|60365|RNA binding motif protein 8a	AK011215|Rbm8a|60365|RNA binding motif protein 8a	AK082925|Rbm8a|60365|RNA binding motif protein 8a	BC020086|Rbm8a|60365|RNA binding motif protein 8a	BC058376|Rbm8a|60365|RNA binding motif protein 8a
mm9_v1_chr13_+_113450958_113450993	2.38183	BPTF.p2	AK020109|Slc38a9|268706|solute carrier family 38, member 9	BC052361|Slc38a9|268706|solute carrier family 38, member 9	NM_178746|Slc38a9|268706|solute carrier family 38, member 9	AK044735|Slc38a9|268706|solute carrier family 38, member 9	AK043402|Slc38a9|268706|solute carrier family 38, member 9	AK034958|Slc38a9|268706|solute carrier family 38, member 9	AK039821|Slc38a9|268706|solute carrier family 38, member 9
mm9_v1_chr2_+_5766079_5766079	2.38003	BPTF.p2	AK088222|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5	NM_016918|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm9_v1_chr11_-_99527240_99527273	2.37924	BPTF.p2	BC120646|Krtap4-6|68768|keratin associated protein 4-6	BC120648|Krtap4-6|68768|keratin associated protein 4-6	AK004258|Krtap4-6|68768|keratin associated protein 4-6	NM_026834|Krtap4-6|68768|keratin associated protein 4-6
mm9_v1_chr3_+_89908053_89908055	2.37679	BPTF.p2	NM_029937|Nup210l|77595|nucleoporin 210-like	AK019752|Nup210l|77595|nucleoporin 210-like
mm9_v1_chr9_-_100407241_100407274	2.37637	BPTF.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr4_+_48064119_48064124	2.37617	BPTF.p2	AB221628|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	AF191211|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	AF191212|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	NM_015743|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	BC128308|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	BC128307|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3
mm9_v1_chr9_+_55937776_55937786	2.37494	BPTF.p2	X96700|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1	AK037936|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1	AK088150|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1	NM_011193|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1
mm9_v1_chr3_-_103546233_103546253	2.3723	BPTF.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr2_-_59963796_59963833	2.36488	BPTF.p2	NM_001001182|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK147737|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr16_-_55838834_55839011	2.36462	BPTF.p2	AB020974|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	BC033044|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chr3_+_103664214_103664288	2.35942	BPTF.p2	M90388|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_008979|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK169559|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC055377|Ptpn22|19260|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
mm9_v1_chr6_+_140571183_140571183	2.35852	BPTF.p2	AK029011|Aebp2|11569|AE binding protein 2	NM_178803|Aebp2|11569|AE binding protein 2
mm9_v1_chr7_-_53971038_53971045	2.35396	BPTF.p2	BC055885|Saa3|20210|serum amyloid A 3	NM_011315|Saa3|20210|serum amyloid A 3
mm9_v1_chr2_-_94252368_94252477	2.35047	BPTF.p2	AK212083|Api5|11800|apoptosis inhibitor 5
mm9_v1_chr19_+_29441927_29441979	2.34267	BPTF.p2	NM_021893|Cd274|60533|CD274 antigen	BC066841|Cd274|60533|CD274 antigen	AK080003|Cd274|60533|CD274 antigen	AK154403|Cd274|60533|CD274 antigen	AK089307|Cd274|60533|CD274 antigen
mm9_v1_chr2_+_24242134_24242148	2.33739	BPTF.p2	AK150238|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK155249|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK169859|Psd4|215632|pleckstrin and Sec7 domain containing 4
mm9_v1_chrX_-_7770637_7770637	2.33672	BPTF.p2	BC004703|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	NM_007898|Ebp|13595|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm9_v1_chr3_+_63780020_63780051	2.33663	BPTF.p2	AK146654|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr13_+_37437194_37437308	2.33424	BPTF.p2	AB007599|Ly86|17084|lymphocyte antigen 86	NM_010745|Ly86|17084|lymphocyte antigen 86	AK027929|Ly86|17084|lymphocyte antigen 86	BC096414|Ly86|17084|lymphocyte antigen 86	BC065783|Ly86|17084|lymphocyte antigen 86
mm9_v1_chr18_-_66129715_66129836	2.33126	BPTF.p2	AY264291|Cplx4|225644|complexin 4	BC016082|Cplx4|225644|complexin 4	NM_145493|Cplx4|225644|complexin 4	AK044262|Cplx4|225644|complexin 4
mm9_v1_chr9_+_109778051_109778082	2.32874	BPTF.p2	AK077991|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)	NM_007658|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)
mm9_v1_chr15_+_81494368_81494374	2.32624	BPTF.p2	AK029115|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr14_-_70751120_70751274	2.32616	BPTF.p2	AK158096|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AB177995|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	BC021530|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135151|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_144808|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr4_-_151665770_151665770	2.32568	BPTF.p2	AK090218|Hes3|15207|hairy and enhancer of split 3 (Drosophila)	NM_008237|Hes3|15207|hairy and enhancer of split 3 (Drosophila)
mm9_v1_chr2_+_84776809_84776813	2.32398	BPTF.p2	NM_021398|Slc43a3|58207|solute carrier family 43, member 3
mm9_v1_chr7_+_31208322_31208362	2.31749	BPTF.p2	NM_172142|Nfkbid|243910|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta	AY078069|Nfkbid|243910|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta	BC110633|Nfkbid|243910|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
mm9_v1_chr5_+_65194627_65194653	2.31681	BPTF.p2	AK157576|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr17_+_34229284_34229376	2.31651	BPTF.p2	BC138996|H2-Oa|15001|histocompatibility 2, O region alpha locus	BC138997|H2-Oa|15001|histocompatibility 2, O region alpha locus	NM_008206|H2-Oa|15001|histocompatibility 2, O region alpha locus	AK020594|H2-Oa|15001|histocompatibility 2, O region alpha locus	AK170742|H2-Oa|15001|histocompatibility 2, O region alpha locus	BC033927|H2-Oa|15001|histocompatibility 2, O region alpha locus	M95514|H2-Oa|15001|histocompatibility 2, O region alpha locus
mm9_v1_chr4_+_140703825_140703842	2.31511	BPTF.p2	NM_172518|Fbxo42|213499|F-box protein 42
mm9_v1_chr8_-_71601126_71601131	2.31264	BPTF.p2	AK076433|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	AK144034|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr17_-_7165497_7165525	2.31046	BPTF.p2	AF314818|Tagap1|380608|T-cell activation GTPase activating protein 1	BC119550|Tagap1|380608|T-cell activation GTPase activating protein 1	BC119551|Tagap1|380608|T-cell activation GTPase activating protein 1	BC139797|Tagap1|380608|T-cell activation GTPase activating protein 1	NM_147155|Tagap1|380608|T-cell activation GTPase activating protein 1
mm9_v1_chrX_-_17149313_17149460	2.30188	BPTF.p2	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr11_-_100749131_100749140	2.30138	BPTF.p2	AK004083|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr14_-_79790474_79790599	2.29631	BPTF.p2	BC052445|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	NM_025832|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK005056|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK152498|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK007755|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK028432|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
mm9_v1_chr13_+_5860701_5860744	2.29625	BPTF.p2	NM_011803|Klf6|23849|Kruppel-like factor 6	AY027436|Klf6|23849|Kruppel-like factor 6
mm9_v1_chr9_+_44789868_44790000	2.29526	BPTF.p2	AK042172|Cd3d|12500|CD3 antigen, delta polypeptide	NM_013487|Cd3d|12500|CD3 antigen, delta polypeptide	AK050629|Cd3d|12500|CD3 antigen, delta polypeptide	AK153843|Cd3d|12500|CD3 antigen, delta polypeptide	AK154064|Cd3d|12500|CD3 antigen, delta polypeptide	BC062807|Cd3d|12500|CD3 antigen, delta polypeptide	EF382667|Cd3d|12500|CD3 antigen, delta polypeptide	HM536173|Cd3d|12500|CD3 antigen, delta polypeptide	X02339|Cd3d|12500|CD3 antigen, delta polypeptide
mm9_v1_chr18_-_38498564_38498663	2.29478	BPTF.p2	BC014800|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK084247|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AF160355|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK080610|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AK166069|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	AF088903|Gnpda1|26384|glucosamine-6-phosphate deaminase 1	NM_011937|Gnpda1|26384|glucosamine-6-phosphate deaminase 1
mm9_v1_chr9_-_70452528_70452545	2.2924	BPTF.p2	AK041072|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr11_+_48615792_48615849	2.29184	BPTF.p2	BC036295|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr7_-_138554028_138554053	2.29108	BPTF.p2	AK088289|Ikzf5|67143|IKAROS family zinc finger 5
mm9_v1_chr5_+_117724658_117724663	2.29015	BPTF.p2	AK013486|Taok3|330177|TAO kinase 3
mm9_v1_chr5_+_130732904_130732998	2.2901	BPTF.p2	AK162899|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	NM_001015876|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	AK082884|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	BC068126|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm9_v1_chr5_-_106887469_106887485	2.28618	BPTF.p2	BC055789|Barhl2|104382|BarH-like 2 (Drosophila)
mm9_v1_chr6_+_123073333_123073350	2.28295	BPTF.p2	AF387099|Clec4a2|26888|C-type lectin domain family 4, member a2	AJ133533|Clec4a2|26888|C-type lectin domain family 4, member a2	NM_001170333|Clec4a2|26888|C-type lectin domain family 4, member a2	NM_011999|Clec4a2|26888|C-type lectin domain family 4, member a2
mm9_v1_chr2_-_38142866_38142913	2.28263	BPTF.p2	BC027786|Dennd1a|227801|DENN/MADD domain containing 1A	AK137530|Dennd1a|227801|DENN/MADD domain containing 1A	BC023016|Dennd1a|227801|DENN/MADD domain containing 1A	NM_146122|Dennd1a|227801|DENN/MADD domain containing 1A
mm9_v1_chr9_+_72286335_72286422	2.27887	BPTF.p2	NM_008613|Mns1|17427|meiosis-specific nuclear structural protein 1	AK132772|Mns1|17427|meiosis-specific nuclear structural protein 1	AK013048|Mns1|17427|meiosis-specific nuclear structural protein 1	BC046624|Mns1|17427|meiosis-specific nuclear structural protein 1
mm9_v1_chr5_+_142877515_142877558	2.2775	BPTF.p2	AK144418|Foxk1|17425|forkhead box K1
mm9_v1_chr4_-_131909543_131909559	2.27677	BPTF.p2	AJ006837|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3	AK076188|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr5_-_77334487_77334538	2.27649	BPTF.p2	BC094507|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK217387|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK038779|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK043807|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK136849|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	AK148405|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase	NM_173765|Aasdh|231326|aminoadipate-semialdehyde dehydrogenase
mm9_v1_chr1_+_61034757_61034802	2.27402	BPTF.p2	NM_017480|Icos|54167|inducible T-cell co-stimulator	AK030827|Icos|54167|inducible T-cell co-stimulator	AJ250559|Icos|54167|inducible T-cell co-stimulator	BC034852|Icos|54167|inducible T-cell co-stimulator	AB023132|Icos|54167|inducible T-cell co-stimulator	AF257230|Icos|54167|inducible T-cell co-stimulator	AF216748|Icos|54167|inducible T-cell co-stimulator
mm9_v1_chr13_-_67162084_67162105	2.27285	BPTF.p2	AK019536|Zfp712|78251|zinc finger protein 712	NM_001166218|Zfp712|78251|zinc finger protein 712
mm9_v1_chr17_+_35403998_35404048	2.27083	BPTF.p2	
mm9_v1_chr10_-_39451772_39451860	2.26992	BPTF.p2	AK049799|E130307A14Rik|327744|RIKEN cDNA E130307A14 gene	AK164126|E130307A14Rik|327744|RIKEN cDNA E130307A14 gene
mm9_v1_chr8_-_72433344_72433376	2.26935	BPTF.p2	AK004386|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr9_+_22030134_22030214	2.26894	BPTF.p2	NM_172763|Zfp809|235047|zinc finger protein 809	NM_001164624|Zfp809|235047|zinc finger protein 809	AK044107|Zfp809|235047|zinc finger protein 809	AK089532|Zfp809|235047|zinc finger protein 809	AK049344|Zfp809|235047|zinc finger protein 809	BC099418|Zfp809|235047|zinc finger protein 809
mm9_v1_chr18_-_61008391_61008636	2.26783	BPTF.p2	U81030|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AF001794|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC057342|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC060105|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC046608|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC052669|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	AK089518|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	BC021514|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_001198984|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog	NM_011552|Tcof1|21453|Treacher Collins Franceschetti syndrome 1, homolog
mm9_v1_chr8_+_87595619_87595694	2.26719	BPTF.p2	AK159104|Dhps|330817|deoxyhypusine synthase	NM_001039514|Dhps|330817|deoxyhypusine synthase	BC061234|Dhps|330817|deoxyhypusine synthase
mm9_v1_chr5_+_88983413_88983556	2.267	BPTF.p2	BC003213|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AK010316|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AK145637|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	BC016581|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	BC022994|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AF155362|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AF271213|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	NM_023054|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
mm9_v1_chr16_-_98169926_98169967	2.26611	BPTF.p2	AK017406|Zfp295|114565|zinc finger protein 295	AK084920|Zfp295|114565|zinc finger protein 295
mm9_v1_chr5_+_135058559_135058657	2.26484	BPTF.p2	NM_020022|Rfc2|19718|replication factor C (activator 1) 2	BC099370|Rfc2|19718|replication factor C (activator 1) 2	AK154681|Rfc2|19718|replication factor C (activator 1) 2	BC023028|Rfc2|19718|replication factor C (activator 1) 2	AK011649|Rfc2|19718|replication factor C (activator 1) 2	AK011353|Rfc2|19718|replication factor C (activator 1) 2	AK075997|Rfc2|19718|replication factor C (activator 1) 2
mm9_v1_chr7_-_29678773_29678890	2.26407	BPTF.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr8_-_8667108_8667134	2.26336	BPTF.p2	AK034581|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr5_-_38871369_38871544	2.26334	BPTF.p2	AF490463|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	AK037093|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	AK172234|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	AK156740|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	AF469480|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001102414|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001102415|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9
mm9_v1_chr4_-_116793851_116793888	2.26253	BPTF.p2	AK020599|Btbd19|78611|BTB (POZ) domain containing 19
mm9_v1_chr17_-_47739669_47739735	2.26005	BPTF.p2	AK013468|Bysl|53414|bystin-like
mm9_v1_chr7_-_34981664_34981695	2.25702	BPTF.p2	BC115797|Pdcd2l|68079|programmed cell death 2-like	AK077948|Pdcd2l|68079|programmed cell death 2-like	NM_026549|Pdcd2l|68079|programmed cell death 2-like	AK151495|Pdcd2l|68079|programmed cell death 2-like	AK003339|Pdcd2l|68079|programmed cell death 2-like	AK154811|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr4_+_151424681_151424743	2.25674	BPTF.p2	AK179132|Nol9|74035|nucleolar protein 9
mm9_v1_chr17_-_95149210_95149231	2.25617	BPTF.p2	AK043389|Mettl4|76781|methyltransferase like 4	AK157268|Mettl4|76781|methyltransferase like 4	NM_176917|Mettl4|76781|methyltransferase like 4
mm9_v1_chr6_-_131197295_131197381	2.25326	BPTF.p2	U10304|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	AK017140|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	BC064711|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_001170851|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_008462|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2
mm9_v1_chr12_-_32319353_32319551	2.25116	BPTF.p2	BC003303|Bcap29|12033|B-cell receptor-associated protein 29	BC021661|Bcap29|12033|B-cell receptor-associated protein 29	NM_007530|Bcap29|12033|B-cell receptor-associated protein 29	AK090068|Bcap29|12033|B-cell receptor-associated protein 29	AK144754|Bcap29|12033|B-cell receptor-associated protein 29	NM_001164090|Bcap29|12033|B-cell receptor-associated protein 29
mm9_v1_chr6_-_114987860_114987905	2.24709	BPTF.p2	AK160774|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene	NM_026894|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene	AK005100|1500001M20Rik|68971|RIKEN cDNA 1500001M20 gene
mm9_v1_chr15_-_75262160_75262258	2.24597	BPTF.p2	BC147461|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC147464|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	AK136484|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC087965|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	NM_001039720|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene
mm9_v1_chr11_-_40568524_40568688	2.24565	BPTF.p2	AK136645|Ccng1|12450|cyclin G1	BC006609|Ccng1|12450|cyclin G1
mm9_v1_chr7_+_13466525_13466568	2.24103	BPTF.p2	AK132244|Zfp128|243833|zinc finger protein 128	AK035906|Zfp128|243833|zinc finger protein 128	NM_153802|Zfp128|243833|zinc finger protein 128	AK032046|Zfp128|243833|zinc finger protein 128	BC088998|Zfp128|243833|zinc finger protein 128	BC094248|Zfp128|243833|zinc finger protein 128	AF480861|Zfp128|243833|zinc finger protein 128
mm9_v1_chr6_+_47827641_47827690	2.23738	BPTF.p2	AK030516|Zfp282|101095|zinc finger protein 282	AK081854|Zfp282|101095|zinc finger protein 282	BC025581|Zfp282|101095|zinc finger protein 282
mm9_v1_chr4_+_59048027_59048124	2.23731	BPTF.p2	NM_025277|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	AK014158|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	BC023670|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	AK003187|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	BC055434|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10	BC061090|Gng10|14700|guanine nucleotide binding protein (G protein), gamma 10
mm9_v1_chr3_-_95111053_95111097	2.23705	BPTF.p2	AJ401160|Anxa9|71790|annexin A9	AK010128|Anxa9|71790|annexin A9	NM_023628|Anxa9|71790|annexin A9
mm9_v1_chr8_+_71317827_71317912	2.23682	BPTF.p2	AK040574|Ints10|70885|integrator complex subunit 10	AK047093|Ints10|70885|integrator complex subunit 10	AK014939|Ints10|70885|integrator complex subunit 10	NM_027590|Ints10|70885|integrator complex subunit 10	AK147743|Ints10|70885|integrator complex subunit 10	AK169819|Ints10|70885|integrator complex subunit 10	AK030974|Ints10|70885|integrator complex subunit 10	BC031923|Ints10|70885|integrator complex subunit 10	AK083331|Ints10|70885|integrator complex subunit 10	AK034498|Ints10|70885|integrator complex subunit 10
mm9_v1_chr8_-_11478623_11478709	2.23241	BPTF.p2	AK152454|Rab20|19332|RAB20, member RAS oncogene family	BC089570|Rab20|19332|RAB20, member RAS oncogene family	AK163743|Rab20|19332|RAB20, member RAS oncogene family	AK164541|Rab20|19332|RAB20, member RAS oncogene family	AK145566|Rab20|19332|RAB20, member RAS oncogene family	BC051569|Rab20|19332|RAB20, member RAS oncogene family
mm9_v1_chr17_+_21587315_21587362	2.23132	BPTF.p2	NM_009558|Zfp51|22709|zinc finger protein 51	X74855|Zfp51|22709|zinc finger protein 51	AK154157|Zfp51|22709|zinc finger protein 51	AK133677|Zfp51|22709|zinc finger protein 51	BC011183|Zfp51|22709|zinc finger protein 51
mm9_v1_chr16_-_16073490_16073537	2.23083	BPTF.p2	AK170784|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene
mm9_v1_chr2_+_60047917_60048030	2.22814	BPTF.p2	AK034109|March7|57438|membrane-associated ring finger (C3HC4) 7	AK143177|March7|57438|membrane-associated ring finger (C3HC4) 7	AK166666|March7|57438|membrane-associated ring finger (C3HC4) 7	AK168555|March7|57438|membrane-associated ring finger (C3HC4) 7	AF155739|March7|57438|membrane-associated ring finger (C3HC4) 7	NM_020575|March7|57438|membrane-associated ring finger (C3HC4) 7	AK167246|March7|57438|membrane-associated ring finger (C3HC4) 7
mm9_v1_chr14_-_20796255_20796277	2.22556	BPTF.p2	AK003588|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK036138|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2
mm9_v1_chr16_+_32608981_32609106	2.22219	BPTF.p2	NM_011638|Tfrc|22042|transferrin receptor	AK048228|Tfrc|22042|transferrin receptor	AK088961|Tfrc|22042|transferrin receptor	BC054522|Tfrc|22042|transferrin receptor
mm9_v1_chr19_-_27463677_27463827	2.22192	BPTF.p2	AK004416|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr7_+_63185457_63185630	2.22171	BPTF.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr8_+_13339673_13339702	2.2195	BPTF.p2	NM_009361|Tfdp1|21781|transcription factor Dp 1	X72310|Tfdp1|21781|transcription factor Dp 1	BC132567|Tfdp1|21781|transcription factor Dp 1	BC132569|Tfdp1|21781|transcription factor Dp 1	BC145344|Tfdp1|21781|transcription factor Dp 1
mm9_v1_chr16_+_36081360_36081360	2.21947	BPTF.p2	NM_001159422|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr17_+_48371921_48371947	2.21676	BPTF.p2	NM_021406|Trem1|58217|triggering receptor expressed on myeloid cells 1	AK171753|Trem1|58217|triggering receptor expressed on myeloid cells 1	AK089439|Trem1|58217|triggering receptor expressed on myeloid cells 1	BC111875|Trem1|58217|triggering receptor expressed on myeloid cells 1	AF241219|Trem1|58217|triggering receptor expressed on myeloid cells 1
mm9_v1_chr11_+_58013057_58013152	2.21369	BPTF.p2	AK088315|Igtp|16145|interferon gamma induced GTPase	NM_018738|Igtp|16145|interferon gamma induced GTPase	AK152337|Igtp|16145|interferon gamma induced GTPase	AK165065|Igtp|16145|interferon gamma induced GTPase	AK169307|Igtp|16145|interferon gamma induced GTPase	AK151779|Igtp|16145|interferon gamma induced GTPase	AK153436|Igtp|16145|interferon gamma induced GTPase	AK002843|Igtp|16145|interferon gamma induced GTPase	AK149817|Igtp|16145|interferon gamma induced GTPase	AK151860|Igtp|16145|interferon gamma induced GTPase	AK152483|Igtp|16145|interferon gamma induced GTPase	U53219|Igtp|16145|interferon gamma induced GTPase
mm9_v1_chr16_+_10412017_10412067	2.21351	BPTF.p2	NM_011955|Nubp1|26425|nucleotide binding protein 1	AK157212|Nubp1|26425|nucleotide binding protein 1	BC031430|Nubp1|26425|nucleotide binding protein 1	BC055436|Nubp1|26425|nucleotide binding protein 1	AK020876|Nubp1|26425|nucleotide binding protein 1	BC047926|Nubp1|26425|nucleotide binding protein 1	AF114170|Nubp1|26425|nucleotide binding protein 1
mm9_v1_chr4_-_46416895_46416973	2.2081	BPTF.p2	AK077692|Hemgn|93966|hemogen	AY699986|Hemgn|93966|hemogen	AK156536|Hemgn|93966|hemogen	AK171890|Hemgn|93966|hemogen	AK172421|Hemgn|93966|hemogen
mm9_v1_chr19_-_7785715_7785799	2.20706	BPTF.p2	AF529221|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	BC021384|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052752|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052603|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	NM_144785|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19
mm9_v1_chr12_-_105938606_105938711	2.19899	BPTF.p2	AK137929|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)
mm9_v1_chr6_-_16848352_16848440	2.19478	BPTF.p2	AK156327|Tcfec|21426|transcription factor EC	AK159579|Tcfec|21426|transcription factor EC	BC052832|Tcfec|21426|transcription factor EC	BC064770|Tcfec|21426|transcription factor EC	AK137141|Tcfec|21426|transcription factor EC	AF077742|Tcfec|21426|transcription factor EC	AK157426|Tcfec|21426|transcription factor EC	NM_031198|Tcfec|21426|transcription factor EC
mm9_v1_chr14_+_56223001_56223063	2.19164	BPTF.p2	U51992|Irf9|16391|interferon regulatory factor 9	BC005435|Irf9|16391|interferon regulatory factor 9
mm9_v1_chrX_+_148436378_148436449	2.18487	BPTF.p2	AK088685|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AF233685|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	BC027517|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	NM_016763|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AK002368|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AK013340|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10	AK077735|Hsd17b10|15108|hydroxysteroid (17-beta) dehydrogenase 10
mm9_v1_chr7_-_134281327_134281330	2.18412	BPTF.p2	AK041480|Spn|20737|sialophorin	AK041712|Spn|20737|sialophorin	AK077764|Spn|20737|sialophorin	AK134098|Spn|20737|sialophorin	NM_001037810|Spn|20737|sialophorin	NM_009259|Spn|20737|sialophorin
mm9_v1_chr2_+_156688814_156688934	2.18263	BPTF.p2	NM_026124|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK003568|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK078178|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK031002|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK002452|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK155559|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	BC019445|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene
mm9_v1_chr15_+_81494364_81494367	2.17943	BPTF.p2	AK132012|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK156236|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	NM_145993|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK036510|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr14_-_48037815_48037862	2.17912	BPTF.p2	BC058087|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	BC027273|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK129032|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK147955|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK048470|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK085882|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr2_-_13466273_13466302	2.17662	BPTF.p2	AF045889|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AF012129|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK050403|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK029136|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	BC087892|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	NM_010067|Trdmt1|13434|tRNA aspartic acid methyltransferase 1
mm9_v1_chr19_+_11771544_11771582	2.17501	BPTF.p2	AK143410|Gm97|225923|predicted gene 97	NM_001033283|Gm97|225923|predicted gene 97	BC141228|Gm97|225923|predicted gene 97	BC145553|Gm97|225923|predicted gene 97	BC094934|Gm97|225923|predicted gene 97
mm9_v1_chr5_+_89149887_89150001	2.17025	BPTF.p2	AK045695|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK162120|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_026735|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK150016|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK077320|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK172291|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC104402|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC104403|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK003346|Mobkl1a|68473|MOB1, Mps One Binder kinase activator-like 1A (yeast)
mm9_v1_chr8_+_26750755_26750755	2.16975	BPTF.p2	NM_001081269|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm9_v1_chr8_-_122364230_122364443	2.16485	BPTF.p2	CT010261|Cotl1|72042|coactosin-like 1 (Dictyostelium)	BC011068|Cotl1|72042|coactosin-like 1 (Dictyostelium)	BC010249|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK150888|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK007994|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK008085|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK010052|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK039644|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK151690|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK157694|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK172403|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK148854|Cotl1|72042|coactosin-like 1 (Dictyostelium)
mm9_v1_chr12_-_88813216_88813284	2.1639	BPTF.p2	AK167695|Snw1|66354|SNW domain containing 1	AX775977|Snw1|66354|SNW domain containing 1	AX775979|Snw1|66354|SNW domain containing 1	AK166163|Snw1|66354|SNW domain containing 1	NM_025507|Snw1|66354|SNW domain containing 1
mm9_v1_chr8_-_26149352_26149433	2.16361	BPTF.p2	AK046614|Htra4|330723|HtrA serine peptidase 4	BC132380|Htra4|330723|HtrA serine peptidase 4	BC145842|Htra4|330723|HtrA serine peptidase 4	NM_001081187|Htra4|330723|HtrA serine peptidase 4
mm9_v1_chr18_-_9995729_9995838	2.16342	BPTF.p2	AK206781|Usp14|59025|ubiquitin specific peptidase 14	AK209109|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr11_-_40568710_40568789	2.15989	BPTF.p2	AK167486|Ccng1|12450|cyclin G1	AK159429|Ccng1|12450|cyclin G1	AK153392|Ccng1|12450|cyclin G1	AK167052|Ccng1|12450|cyclin G1	AK159831|Ccng1|12450|cyclin G1	L49507|Ccng1|12450|cyclin G1	Z37110|Ccng1|12450|cyclin G1	AK160411|Ccng1|12450|cyclin G1	AK128957|Ccng1|12450|cyclin G1	AK147026|Ccng1|12450|cyclin G1	AK170397|Ccng1|12450|cyclin G1	AK143114|Ccng1|12450|cyclin G1	NM_009831|Ccng1|12450|cyclin G1
mm9_v1_chr5_+_122821868_122821884	2.15909	BPTF.p2	AK042405|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr17_+_29178771_29178812	2.15792	BPTF.p2	
mm9_v1_chr18_-_35130489_35130501	2.15375	BPTF.p2	
mm9_v1_chr2_-_59963586_59963753	2.15047	BPTF.p2	BC150814|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK029386|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK134250|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK173180|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK030867|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr9_+_63450444_63450525	2.14868	BPTF.p2	AK159897|Aagab|66939|alpha- and gamma-adaptin binding protein	NM_025857|Aagab|66939|alpha- and gamma-adaptin binding protein	BC027311|Aagab|66939|alpha- and gamma-adaptin binding protein	AK017714|Aagab|66939|alpha- and gamma-adaptin binding protein
mm9_v1_chr14_-_48037874_48037887	2.14228	BPTF.p2	AK164575|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK036384|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK135820|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr2_-_34609888_34609977	2.14206	BPTF.p2	BC048847|Gapvd1|66691|GTPase activating protein and VPS9 domains 1	AK150026|Gapvd1|66691|GTPase activating protein and VPS9 domains 1	AK165047|Gapvd1|66691|GTPase activating protein and VPS9 domains 1
mm9_v1_chr19_-_60302571_60302605	2.14202	BPTF.p2	BC056640|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK011404|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK044853|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK075914|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	NM_029648|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	BC048505|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr4_-_141241630_141241630	2.14076	BPTF.p2	BC150752|Rsc1a1|69994|regulatory solute carrier protein, family 1, member 1	NM_023544|Rsc1a1|69994|regulatory solute carrier protein, family 1, member 1
mm9_v1_chrX_-_7505625_7505732	2.1395	BPTF.p2	AK141212|Eras|353283|ES cell-expressed Ras	BC119277|Eras|353283|ES cell-expressed Ras	BC119281|Eras|353283|ES cell-expressed Ras	AB093573|Eras|353283|ES cell-expressed Ras	NM_181548|Eras|353283|ES cell-expressed Ras
mm9_v1_chr18_+_52625323_52625373	2.13762	BPTF.p2	AK012865|Srfbp1|67222|serum response factor binding protein 1	NM_026040|Srfbp1|67222|serum response factor binding protein 1	AK144845|Srfbp1|67222|serum response factor binding protein 1	AK141882|Srfbp1|67222|serum response factor binding protein 1	AK147692|Srfbp1|67222|serum response factor binding protein 1	BC024338|Srfbp1|67222|serum response factor binding protein 1	AY611629|Srfbp1|67222|serum response factor binding protein 1
mm9_v1_chr4_-_124359695_124359773	2.13615	BPTF.p2	AK008801|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr6_+_126889979_126890004	2.13549	BPTF.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr19_-_4190836_4191046	2.13144	BPTF.p2	AK154444|Tbc1d10c|108995|TBC1 domain family, member 10c	BC094901|Tbc1d10c|108995|TBC1 domain family, member 10c	AK088119|Tbc1d10c|108995|TBC1 domain family, member 10c	AK131177|Tbc1d10c|108995|TBC1 domain family, member 10c	AK075803|Tbc1d10c|108995|TBC1 domain family, member 10c	AK146426|Tbc1d10c|108995|TBC1 domain family, member 10c	AK153836|Tbc1d10c|108995|TBC1 domain family, member 10c	AK040487|Tbc1d10c|108995|TBC1 domain family, member 10c	NM_178650|Tbc1d10c|108995|TBC1 domain family, member 10c
mm9_v1_chr10_+_8604373_8604391	2.12808	BPTF.p2	AK010852|Sash1|70097|SAM and SH3 domain containing 1
mm9_v1_chr17_+_53706556_53706657	2.12459	BPTF.p2	AK132486|Kat2b|18519|K(lysine) acetyltransferase 2B	BC138195|Kat2b|18519|K(lysine) acetyltransferase 2B	BC145896|Kat2b|18519|K(lysine) acetyltransferase 2B	BC082581|Kat2b|18519|K(lysine) acetyltransferase 2B	AF254442|Kat2b|18519|K(lysine) acetyltransferase 2B
mm9_v1_chr13_+_67914748_67914779	2.12424	BPTF.p2	AK078495|Zfp273|212569|zinc finger protein 273	NM_198322|Zfp273|212569|zinc finger protein 273	BC094501|Zfp273|212569|zinc finger protein 273
mm9_v1_chr8_+_123059756_123059756	2.12138	BPTF.p2	AK033263|Gse1|382034|genetic suppressor element 1	NM_001145897|Gse1|382034|genetic suppressor element 1
mm9_v1_chr10_+_67000613_67000625	2.11439	BPTF.p2	AK155585|Egr2|13654|early growth response 2	NM_010118|Egr2|13654|early growth response 2	AK153882|Egr2|13654|early growth response 2	X06746|Egr2|13654|early growth response 2
mm9_v1_chr1_+_70772288_70772496	2.11411	BPTF.p2	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chr5_+_114580397_114580568	2.11298	BPTF.p2	BC011039|Ung|22256|uracil DNA glycosylase	NM_001040691|Ung|22256|uracil DNA glycosylase	Y08975|Ung|22256|uracil DNA glycosylase	AK146178|Ung|22256|uracil DNA glycosylase
mm9_v1_chr11_+_54251680_54251744	2.11059	BPTF.p2	NM_173753|Fnip1|216742|folliculin interacting protein 1	BC079892|Fnip1|216742|folliculin interacting protein 1	AK122574|Fnip1|216742|folliculin interacting protein 1
mm9_v1_chr7_-_134519509_134519563	2.10878	BPTF.p2	BC058799|Zfp747|269997|zinc finger protein 747	AK032584|Zfp747|269997|zinc finger protein 747	AK042972|Zfp747|269997|zinc finger protein 747	NM_175560|Zfp747|269997|zinc finger protein 747
mm9_v1_chrX_-_133572810_133572840	2.10569	BPTF.p2	AK013345|Mcart6|67062|mitochondrial carrier triple repeat 6	AK028496|Mcart6|67062|mitochondrial carrier triple repeat 6	AK076279|Mcart6|67062|mitochondrial carrier triple repeat 6	AK009846|Mcart6|67062|mitochondrial carrier triple repeat 6	AK012963|Mcart6|67062|mitochondrial carrier triple repeat 6	NM_001082412|Mcart6|67062|mitochondrial carrier triple repeat 6
mm9_v1_chr13_-_38726917_38726993	2.10431	BPTF.p2	AK075808|Muted|17828|muted	AK170614|Muted|17828|muted	AK039050|Muted|17828|muted	BC024720|Muted|17828|muted	AK147762|Muted|17828|muted	AK171537|Muted|17828|muted	AF426433|Muted|17828|muted	NM_139063|Muted|17828|muted
mm9_v1_chr8_+_86521498_86521570	2.10101	BPTF.p2	NM_001081415|Samd1|666704|sterile alpha motif domain containing 1
mm9_v1_chr4_+_126803305_126803317	2.09676	BPTF.p2	AK156456|Gm12942|100039968|predicted gene 12942
mm9_v1_chr1_+_24184448_24184693	2.09425	BPTF.p2	NM_007740|Col9a1|12839|collagen, type IX, alpha 1	AK031071|Col9a1|12839|collagen, type IX, alpha 1	D17511|Col9a1|12839|collagen, type IX, alpha 1	BC046970|Col9a1|12839|collagen, type IX, alpha 1	L12215|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr15_+_97077537_97077537	2.09214	BPTF.p2	AK051480|Fam113b|239647|family with sequence similarity 113, member B	NM_172293|Fam113b|239647|family with sequence similarity 113, member B
mm9_v1_chr5_-_115119973_115120071	2.08956	BPTF.p2	AK189496|Gltp|56356|glycolipid transfer protein
mm9_v1_chr2_+_172805342_172805379	2.08196	BPTF.p2	AF126400|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF163053|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF163054|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	NM_001083959|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	NM_001083960|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	NM_012046|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF169386|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF165313|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF167439|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF173848|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF149309|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)
mm9_v1_chr9_-_57287763_57287952	2.07719	BPTF.p2	AK031599|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK038628|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK036042|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK078825|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	AK007887|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	BC004779|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase	NM_176831|Ppcdc|66812|phosphopantothenoylcysteine decarboxylase
mm9_v1_chr9_+_104955563_104955826	2.07296	BPTF.p2	AK008592|Mrpl3|94062|mitochondrial ribosomal protein L3	AK145687|Mrpl3|94062|mitochondrial ribosomal protein L3	AK169272|Mrpl3|94062|mitochondrial ribosomal protein L3	NM_053159|Mrpl3|94062|mitochondrial ribosomal protein L3	AK077857|Mrpl3|94062|mitochondrial ribosomal protein L3	AK002509|Mrpl3|94062|mitochondrial ribosomal protein L3	BC011128|Mrpl3|94062|mitochondrial ribosomal protein L3	BC016586|Mrpl3|94062|mitochondrial ribosomal protein L3	BC034877|Mrpl3|94062|mitochondrial ribosomal protein L3	AB049633|Mrpl3|94062|mitochondrial ribosomal protein L3	AK217246|Mrpl3|94062|mitochondrial ribosomal protein L3
mm9_v1_chr17_-_34134101_34134261	2.05988	BPTF.p2	M23894|H2-K1|14972|histocompatibility 2, K1, K region	M23895|H2-K1|14972|histocompatibility 2, K1, K region	M23896|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr10_-_62255007_62255115	2.05958	BPTF.p2	BC034174|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC051052|Ccar1|67500|cell division cycle and apoptosis regulator 1	NM_026201|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr19_+_29485408_29485503	2.05945	BPTF.p2	AK089369|Pdcd1lg2|58205|programmed cell death 1 ligand 2	NM_021396|Pdcd1lg2|58205|programmed cell death 1 ligand 2	AF142780|Pdcd1lg2|58205|programmed cell death 1 ligand 2	AK155002|Pdcd1lg2|58205|programmed cell death 1 ligand 2	BC104138|Pdcd1lg2|58205|programmed cell death 1 ligand 2	BC104139|Pdcd1lg2|58205|programmed cell death 1 ligand 2
mm9_v1_chr10_+_24589791_24589858	2.05772	BPTF.p2	NM_001166416|Med23|70208|mediator complex subunit 23	NM_027347|Med23|70208|mediator complex subunit 23	AK028545|Med23|70208|mediator complex subunit 23	AK042346|Med23|70208|mediator complex subunit 23	AF507918|Med23|70208|mediator complex subunit 23	BC050916|Med23|70208|mediator complex subunit 23	BC040398|Med23|70208|mediator complex subunit 23	AK129312|Med23|70208|mediator complex subunit 23
mm9_v1_chrX_+_34335642_34335646	2.05417	BPTF.p2	U27316|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK003467|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	NM_007451|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr1_-_195068455_195068557	2.05385	BPTF.p2	DQ089001|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	S75207|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK149518|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK165212|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	NM_001044751|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1
mm9_v1_chr15_-_68090408_68090465	2.05286	BPTF.p2	BC053930|Zfat|380993|zinc finger and AT hook domain containing	NM_001145888|Zfat|380993|zinc finger and AT hook domain containing	NM_198644|Zfat|380993|zinc finger and AT hook domain containing
mm9_v1_chr16_-_46120221_46120363	2.04898	BPTF.p2	AY029156|Cd96|84544|CD96 antigen	AK040329|Cd96|84544|CD96 antigen	BC052865|Cd96|84544|CD96 antigen	AK154076|Cd96|84544|CD96 antigen	AK156470|Cd96|84544|CD96 antigen	NM_032465|Cd96|84544|CD96 antigen	AK040539|Cd96|84544|CD96 antigen
mm9_v1_chr12_-_86113816_86113911	2.0446	BPTF.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr17_+_34727032_34727160	2.0441	BPTF.p2	AK155863|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC021942|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)
mm9_v1_chr13_+_97158248_97158334	2.04372	BPTF.p2	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr7_-_148452299_148452324	2.04153	BPTF.p2	NM_016850|Irf7|54123|interferon regulatory factor 7	U73037|Irf7|54123|interferon regulatory factor 7	AK004349|Irf7|54123|interferon regulatory factor 7	AK150608|Irf7|54123|interferon regulatory factor 7	AK158378|Irf7|54123|interferon regulatory factor 7	AK158403|Irf7|54123|interferon regulatory factor 7	AK089869|Irf7|54123|interferon regulatory factor 7	AK002830|Irf7|54123|interferon regulatory factor 7	AK079685|Irf7|54123|interferon regulatory factor 7	AK150403|Irf7|54123|interferon regulatory factor 7	AK151470|Irf7|54123|interferon regulatory factor 7	AK152401|Irf7|54123|interferon regulatory factor 7	AK152403|Irf7|54123|interferon regulatory factor 7	AK153054|Irf7|54123|interferon regulatory factor 7	AK155950|Irf7|54123|interferon regulatory factor 7	AK159142|Irf7|54123|interferon regulatory factor 7	AK159883|Irf7|54123|interferon regulatory factor 7
mm9_v1_chr11_-_58717666_58717726	2.04093	BPTF.p2	BC108271|Zfp39|22698|zinc finger protein 39	AK141135|Zfp39|22698|zinc finger protein 39	AK045944|Zfp39|22698|zinc finger protein 39	NM_011758|Zfp39|22698|zinc finger protein 39
mm9_v1_chr8_+_54597026_54597158	2.04057	BPTF.p2	NM_001005847|Aga|11593|aspartylglucosaminidase	BC132227|Aga|11593|aspartylglucosaminidase	BC132229|Aga|11593|aspartylglucosaminidase	BC145297|Aga|11593|aspartylglucosaminidase	S81393|Aga|11593|aspartylglucosaminidase	BC048230|Aga|11593|aspartylglucosaminidase
mm9_v1_chr2_+_51928350_51928369	2.04018	BPTF.p2	AY428571|Rif1|51869|Rap1 interacting factor 1 homolog (yeast)	NM_175238|Rif1|51869|Rap1 interacting factor 1 homolog (yeast)	AY585206|Rif1|51869|Rap1 interacting factor 1 homolog (yeast)
mm9_v1_chr14_-_64162509_64162554	2.03937	BPTF.p2	BC145946|Mtmr9|210376|myotubularin related protein 9	BC145948|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr9_+_3532302_3532353	2.03349	BPTF.p2	NM_001033322|Gucy1a2|234889|guanylate cyclase 1, soluble, alpha 2
mm9_v1_chr2_+_30808463_30808542	2.02945	BPTF.p2	AK054404|Tor1b|30934|torsin family 1, member B	AK169692|Tor1b|30934|torsin family 1, member B	AK017290|Tor1b|30934|torsin family 1, member B	AK149754|Tor1b|30934|torsin family 1, member B	AJ297743|Tor1b|30934|torsin family 1, member B	NM_133673|Tor1b|30934|torsin family 1, member B	BC018456|Tor1b|30934|torsin family 1, member B	AK159843|Tor1b|30934|torsin family 1, member B
mm9_v1_chr4_+_150371205_150371241	2.02781	BPTF.p2	AF172175|Uts2|24111|urotensin 2	NM_011910|Uts2|24111|urotensin 2	BC107299|Uts2|24111|urotensin 2	BC107300|Uts2|24111|urotensin 2	AY065984|Uts2|24111|urotensin 2
mm9_v1_chr3_+_108456817_108456934	2.02692	BPTF.p2	NM_145543|Clcc1|229725|chloride channel CLIC-like 1	AK169803|Clcc1|229725|chloride channel CLIC-like 1	NM_001177771|Clcc1|229725|chloride channel CLIC-like 1	AK090092|Clcc1|229725|chloride channel CLIC-like 1	AK143631|Clcc1|229725|chloride channel CLIC-like 1	AK171296|Clcc1|229725|chloride channel CLIC-like 1	NM_001177770|Clcc1|229725|chloride channel CLIC-like 1	AK179081|Clcc1|229725|chloride channel CLIC-like 1
mm9_v1_chr4_+_135728188_135728308	2.01929	BPTF.p2	AK087452|E2f2|242705|E2F transcription factor 2	NM_177733|E2f2|242705|E2F transcription factor 2
mm9_v1_chr6_-_16848314_16848325	2.01817	BPTF.p2	BC098494|Tcfec|21426|transcription factor EC
mm9_v1_chr5_-_122020680_122020739	2.01734	BPTF.p2	AK184586|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK189526|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK188389|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr13_+_36209279_36209279	2.01722	BPTF.p2	NM_001039189|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	NM_024274|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr1_-_146096156_146096233	2.01581	BPTF.p2	BC052684|Rgs1|50778|regulator of G-protein signaling 1	AF215667|Rgs1|50778|regulator of G-protein signaling 1	BC028634|Rgs1|50778|regulator of G-protein signaling 1	AK154841|Rgs1|50778|regulator of G-protein signaling 1	AK170366|Rgs1|50778|regulator of G-protein signaling 1	AK089293|Rgs1|50778|regulator of G-protein signaling 1	AK138688|Rgs1|50778|regulator of G-protein signaling 1	AK154394|Rgs1|50778|regulator of G-protein signaling 1	AK170957|Rgs1|50778|regulator of G-protein signaling 1	AK171306|Rgs1|50778|regulator of G-protein signaling 1	NM_015811|Rgs1|50778|regulator of G-protein signaling 1
mm9_v1_chr11_+_106612525_106612642	2.01552	BPTF.p2	BC139224|Gm885|380732|predicted gene 885	BC139225|Gm885|380732|predicted gene 885	BC145580|Gm885|380732|predicted gene 885	BC145582|Gm885|380732|predicted gene 885	AK169925|Gm885|380732|predicted gene 885	AB542953|Gm885|380732|predicted gene 885	AK136488|Gm885|380732|predicted gene 885	AK137500|Gm885|380732|predicted gene 885	AK171381|Gm885|380732|predicted gene 885	NM_001033435|Gm885|380732|predicted gene 885	AK151814|Gm885|380732|predicted gene 885	AK170947|Gm885|380732|predicted gene 885	AK153506|Gm885|380732|predicted gene 885
mm9_v1_chr12_+_72456427_72456435	2.01476	BPTF.p2	
mm9_v1_chr2_+_17976897_17976897	2.01115	BPTF.p2	BC070475|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_010804|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr5_+_138635541_138635706	2.00687	BPTF.p2	AK049381|Mblac1|330216|metallo-beta-lactamase domain containing 1	NM_177878|Mblac1|330216|metallo-beta-lactamase domain containing 1	BC038925|Mblac1|330216|metallo-beta-lactamase domain containing 1
mm9_v1_chr14_+_26484518_26484659	2.00351	BPTF.p2	AK132106|Gm10397|100038401|predicted gene 10397
mm9_v1_chrX_+_34335647_34335650	2.00168	BPTF.p2	AK012751|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK002283|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK017881|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK088730|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	X70847|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr17_+_26389911_26389996	1.9977	BPTF.p2	BC055875|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	BC019194|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK211801|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr19_+_55816320_55816547	1.99516	BPTF.p2	AK132465|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AK035059|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AF107298|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr1_-_66909822_66909954	1.99369	BPTF.p2	U21489|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	BC027412|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK005140|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	NM_007381|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK151845|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK167537|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain
mm9_v1_chrX_+_159213665_159213700	1.99328	BPTF.p2	AK214866|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr12_-_86113948_86114061	1.99089	BPTF.p2	AK158624|Npc2|67963|Niemann Pick type C2	NM_023409|Npc2|67963|Niemann Pick type C2
mm9_v1_chr6_+_117867280_117867570	1.98936	BPTF.p2	NM_001166427|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK076478|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC018185|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC089313|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK188037|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK196656|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr4_-_117564594_117564651	1.98433	BPTF.p2	BC031124|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK018638|Dph2|67728|DPH2 homolog (S. cerevisiae)	NM_026344|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK011199|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK051026|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK080747|Dph2|67728|DPH2 homolog (S. cerevisiae)	BC014746|Dph2|67728|DPH2 homolog (S. cerevisiae)
mm9_v1_chr7_-_111463903_111464008	1.98207	BPTF.p2	BC094899|Trim12a|76681|tripartite motif-containing 12A	AK009769|Trim12a|76681|tripartite motif-containing 12A	AF220126|Trim12a|76681|tripartite motif-containing 12A	AK150759|Trim12a|76681|tripartite motif-containing 12A	AK153559|Trim12a|76681|tripartite motif-containing 12A	NM_023835|Trim12a|76681|tripartite motif-containing 12A
mm9_v1_chr1_-_186556329_186556486	1.97442	BPTF.p2	AK036435|Hlx|15284|H2.0-like homeobox	BC064068|Hlx|15284|H2.0-like homeobox	NM_008250|Hlx|15284|H2.0-like homeobox	X58250|Hlx|15284|H2.0-like homeobox
mm9_v1_chr6_-_131338465_131338473	1.973	BPTF.p2	BC027785|Csda|56449|cold shock domain protein A	NM_011733|Csda|56449|cold shock domain protein A	NM_139117|Csda|56449|cold shock domain protein A
mm9_v1_chr8_-_73223897_73223993	1.97162	BPTF.p2	AK135112|Gm11175|100303737|predicted gene 11175
mm9_v1_chr1_-_182175890_182176045	1.97108	BPTF.p2	AF038935|Psen2|19165|presenilin 2	U57324|Psen2|19165|presenilin 2	NM_011183|Psen2|19165|presenilin 2
mm9_v1_chr14_+_56222821_56222821	1.96956	BPTF.p2	NM_001159417|Irf9|16391|interferon regulatory factor 9	NM_008394|Irf9|16391|interferon regulatory factor 9
mm9_v1_chr16_+_35938555_35938555	1.96868	BPTF.p2	BC070466|Parp9|80285|poly (ADP-ribose) polymerase family, member 9	NM_030253|Parp9|80285|poly (ADP-ribose) polymerase family, member 9
mm9_v1_chr19_+_4100914_4101127	1.96707	BPTF.p2	BC048150|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	BC044893|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chrX_-_159326220_159326424	1.96651	BPTF.p2	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr6_-_130079852_130079915	1.96475	BPTF.p2	AK143236|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	NM_010650|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	AY338977|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AY338978|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116399|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116400|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AF288380|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_053151|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_001101620|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8
mm9_v1_chr4_-_43713678_43713678	1.96439	BPTF.p2	BC046311|Olfr70|56014|olfactory receptor 70	NM_019485|Olfr70|56014|olfactory receptor 70
mm9_v1_chr2_+_167802318_167802398	1.96425	BPTF.p2	AK085713|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr1_-_162133574_162133640	1.96193	BPTF.p2	AK164472|Cacybp|12301|calcyclin binding protein
mm9_v1_chr1_-_39608846_39608882	1.95915	BPTF.p2	AK040602|Rnf149|67702|ring finger protein 149
mm9_v1_chr8_+_87425826_87425890	1.9554	BPTF.p2	BC114978|Klf1|16596|Kruppel-like factor 1 (erythroid)	M97200|Klf1|16596|Kruppel-like factor 1 (erythroid)	NM_010635|Klf1|16596|Kruppel-like factor 1 (erythroid)	AK158037|Klf1|16596|Kruppel-like factor 1 (erythroid)
mm9_v1_chr11_-_106243873_106243954	1.95501	BPTF.p2	AK007801|Icam2|15896|intercellular adhesion molecule 2	BC039128|Icam2|15896|intercellular adhesion molecule 2	BC039970|Icam2|15896|intercellular adhesion molecule 2	NM_010494|Icam2|15896|intercellular adhesion molecule 2	X65493|Icam2|15896|intercellular adhesion molecule 2
mm9_v1_chr6_+_90319485_90319663	1.9526	BPTF.p2	AK081005|Zxdc|80292|ZXD family zinc finger C	NM_030260|Zxdc|80292|ZXD family zinc finger C	NM_173002|Zxdc|80292|ZXD family zinc finger C	BC003332|Zxdc|80292|ZXD family zinc finger C	AK042190|Zxdc|80292|ZXD family zinc finger C	AK044529|Zxdc|80292|ZXD family zinc finger C	AK030287|Zxdc|80292|ZXD family zinc finger C	AK047538|Zxdc|80292|ZXD family zinc finger C	AK042392|Zxdc|80292|ZXD family zinc finger C	AK080307|Zxdc|80292|ZXD family zinc finger C	AK044429|Zxdc|80292|ZXD family zinc finger C	AK044948|Zxdc|80292|ZXD family zinc finger C	AK169517|Zxdc|80292|ZXD family zinc finger C	AK047079|Zxdc|80292|ZXD family zinc finger C	AK137347|Zxdc|80292|ZXD family zinc finger C	AK141613|Zxdc|80292|ZXD family zinc finger C
mm9_v1_chr16_-_94509462_94509462	1.94813	BPTF.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr6_-_127076410_127076426	1.94124	BPTF.p2	AK011225|Ccnd2|12444|cyclin D2
mm9_v1_chr4_+_124377942_124377978	1.93987	BPTF.p2	NM_010213|Fhl3|14201|four and a half LIM domains 3	AF114382|Fhl3|14201|four and a half LIM domains 3	BC144903|Fhl3|14201|four and a half LIM domains 3	BC145939|Fhl3|14201|four and a half LIM domains 3
mm9_v1_chr7_+_29222465_29222512	1.93667	BPTF.p2	AK002834|Gmfg|63986|glia maturation factor, gamma	AK014214|Gmfg|63986|glia maturation factor, gamma	NM_022024|Gmfg|63986|glia maturation factor, gamma	AF297221|Gmfg|63986|glia maturation factor, gamma	BC011488|Gmfg|63986|glia maturation factor, gamma
mm9_v1_chr1_-_69154627_69154642	1.93563	BPTF.p2	AK144050|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_010154|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
mm9_v1_chr10_-_14425271_14425365	1.93533	BPTF.p2	AK009227|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	BC026752|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK002611|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	NM_025418|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK003213|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK004323|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)
mm9_v1_chr9_+_106091656_106091698	1.93154	BPTF.p2	BC054453|Wdr82|77305|WD repeat domain containing 82	BC112907|Wdr82|77305|WD repeat domain containing 82	BC044669|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr19_+_55816299_55816310	1.92898	BPTF.p2	NM_001142918|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142919|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142920|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142921|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142922|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142923|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_009333|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	BC011397|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr18_+_36919868_36919931	1.92866	BPTF.p2	AK146093|Wdr55|67936|WD repeat domain 55	AK075958|Wdr55|67936|WD repeat domain 55	NM_026464|Wdr55|67936|WD repeat domain 55	BC131932|Wdr55|67936|WD repeat domain 55	BC131934|Wdr55|67936|WD repeat domain 55	AK018469|Wdr55|67936|WD repeat domain 55	AK017695|Wdr55|67936|WD repeat domain 55	BC064750|Wdr55|67936|WD repeat domain 55
mm9_v1_chr15_-_82074765_82074852	1.92764	BPTF.p2	NM_001080158|Cenpm|66570|centromere protein M
mm9_v1_chr6_+_55027608_55027621	1.92378	BPTF.p2	AK191772|Gars|353172|glycyl-tRNA synthetase
mm9_v1_chr15_+_6395353_6395370	1.92101	BPTF.p2	X05475|C9|12279|complement component 9
mm9_v1_chr8_+_58419621_58419700	1.91836	BPTF.p2	NM_080438|Glra3|110304|glycine receptor, alpha 3 subunit	AY230204|Glra3|110304|glycine receptor, alpha 3 subunit	AF362764|Glra3|110304|glycine receptor, alpha 3 subunit
mm9_v1_chr6_-_130143018_130143129	1.91823	BPTF.p2	BC116376|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	BC131790|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF237686|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	NM_010651|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49865|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49866|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49867|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9
mm9_v1_chr4_+_130219281_130219296	1.91505	BPTF.p2	AK163977|Pum1|80912|pumilio 1 (Drosophila)	AK122205|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr19_-_3905229_3905258	1.91444	BPTF.p2	BC006761|Tcirg1|27060|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3	NM_016921|Tcirg1|27060|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
mm9_v1_chr5_-_123439064_123439107	1.91364	BPTF.p2	BC065090|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK043352|Kdm2b|30841|lysine (K)-specific demethylase 2B	NM_001003953|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK136625|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr17_-_31335918_31335919	1.9134	BPTF.p2	NM_001163776|Tmprss3|140765|transmembrane protease, serine 3	AK158203|Tmprss3|140765|transmembrane protease, serine 3
mm9_v1_chr3_-_157694667_157694727	1.91192	BPTF.p2	BC069945|Srsf11|69207|serine/arginine-rich splicing factor 11	BC021809|Srsf11|69207|serine/arginine-rich splicing factor 11	AK029394|Srsf11|69207|serine/arginine-rich splicing factor 11	BC002111|Srsf11|69207|serine/arginine-rich splicing factor 11	AK146719|Srsf11|69207|serine/arginine-rich splicing factor 11	AK002411|Srsf11|69207|serine/arginine-rich splicing factor 11	NM_001093753|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr17_+_47027617_47027637	1.91186	BPTF.p2	AK132036|Tbcc|72726|tubulin-specific chaperone C	AK012950|Tbcc|72726|tubulin-specific chaperone C	BC019476|Tbcc|72726|tubulin-specific chaperone C	BC083164|Tbcc|72726|tubulin-specific chaperone C
mm9_v1_chr17_-_56724005_56724033	1.91133	BPTF.p2	NM_001029979|Safb2|224902|scaffold attachment factor B2
mm9_v1_chr10_-_88289526_88289560	1.91076	BPTF.p2	AK145554|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)	BC084586|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)	NM_175158|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chrX_-_153853209_153853243	1.9092	BPTF.p2	U49908|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	NM_011077|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	U73910|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	AK158481|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)
mm9_v1_chr12_+_53198729_53198769	1.90884	BPTF.p2	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr1_-_137001804_137001852	1.90356	BPTF.p2	BC141210|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	AK085901|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	AK137380|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	NM_001033409|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6
mm9_v1_chr18_-_49915209_49915277	1.90188	BPTF.p2	BC139347|Dtwd2|68857|DTW domain containing 2	BC139348|Dtwd2|68857|DTW domain containing 2	BC145608|Dtwd2|68857|DTW domain containing 2	BC145609|Dtwd2|68857|DTW domain containing 2	AK004450|Dtwd2|68857|DTW domain containing 2	AK144689|Dtwd2|68857|DTW domain containing 2	NM_001170960|Dtwd2|68857|DTW domain containing 2	NM_026854|Dtwd2|68857|DTW domain containing 2
mm9_v1_chr6_+_38868942_38869113	1.89551	BPTF.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chr19_+_8967475_8967547	1.89441	BPTF.p2	NM_176843|Ints5|109077|integrator complex subunit 5	BC039214|Ints5|109077|integrator complex subunit 5	AK144770|Ints5|109077|integrator complex subunit 5	AK166149|Ints5|109077|integrator complex subunit 5	AK168795|Ints5|109077|integrator complex subunit 5	AK143868|Ints5|109077|integrator complex subunit 5	AK155499|Ints5|109077|integrator complex subunit 5	AK170584|Ints5|109077|integrator complex subunit 5	AK172260|Ints5|109077|integrator complex subunit 5
mm9_v1_chr5_+_103274265_103274294	1.89368	BPTF.p2	AK002660|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chrX_+_83289537_83289537	1.89273	BPTF.p2	AK006935|1700072E05Rik|73495|RIKEN cDNA 1700072E05 gene	NM_028554|1700072E05Rik|73495|RIKEN cDNA 1700072E05 gene
mm9_v1_chr18_-_38760921_38761068	1.88638	BPTF.p2	BC050944|Spry4|24066|sprouty homolog 4 (Drosophila)	BC057005|Spry4|24066|sprouty homolog 4 (Drosophila)	NM_011898|Spry4|24066|sprouty homolog 4 (Drosophila)	AK139816|Spry4|24066|sprouty homolog 4 (Drosophila)	AB019280|Spry4|24066|sprouty homolog 4 (Drosophila)	AK037180|Spry4|24066|sprouty homolog 4 (Drosophila)	AK048122|Spry4|24066|sprouty homolog 4 (Drosophila)	AF176906|Spry4|24066|sprouty homolog 4 (Drosophila)
mm9_v1_chr17_-_5440223_5440262	1.88331	BPTF.p2	BC019420|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK043276|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK158107|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK088025|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK155326|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK009851|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK017626|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	AK003559|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene	NM_027457|5730437N04Rik|70544|RIKEN cDNA 5730437N04 gene
mm9_v1_chr3_+_5090275_5090294	1.88272	BPTF.p2	
mm9_v1_chr2_+_79095582_79095877	1.87956	BPTF.p2	AK041096|Itga4|16401|integrin alpha 4	NM_010576|Itga4|16401|integrin alpha 4	AK051676|Itga4|16401|integrin alpha 4	X53176|Itga4|16401|integrin alpha 4	AK156015|Itga4|16401|integrin alpha 4	AK039959|Itga4|16401|integrin alpha 4	AF109136|Itga4|16401|integrin alpha 4	BC068313|Itga4|16401|integrin alpha 4	AK156517|Itga4|16401|integrin alpha 4	AK078842|Itga4|16401|integrin alpha 4
mm9_v1_chr12_+_111724001_111724119	1.87822	BPTF.p2	AB055635|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AB055636|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	U37353|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr7_+_52112742_52112902	1.87818	BPTF.p2	AK159535|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK159770|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK160020|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AF129451|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr8_-_59029362_59029362	1.87747	BPTF.p2	BC088983|BC088983|382010|cDNA sequence BC088983	NM_001009951|BC088983|382010|cDNA sequence BC088983
mm9_v1_chr10_-_43621518_43621567	1.87606	BPTF.p2	BC070459|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK012351|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	NM_001081054|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK041347|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK038801|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr19_-_44220840_44220957	1.8754	BPTF.p2	BC065806|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	AK010745|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	BC048500|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	AK145313|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2	NM_028607|Bloc1s2|73689|biogenesis of lysosome-related organelles complex-1, subunit 2
mm9_v1_chr11_+_116295406_116295422	1.87377	BPTF.p2	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr18_+_82754586_82754645	1.8721	BPTF.p2	AK194642|Mbp|17196|myelin basic protein
mm9_v1_chr4_+_130469187_130469272	1.8718	BPTF.p2	AK171481|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK089432|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171269|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171285|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171575|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK172486|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171057|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171280|Laptm5|16792|lysosomal-associated protein transmembrane 5	U51239|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171571|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK170690|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171250|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171053|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK089508|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171149|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK170867|Laptm5|16792|lysosomal-associated protein transmembrane 5	AF364050|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171270|Laptm5|16792|lysosomal-associated protein transmembrane 5	U29539|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK031802|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK050633|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK153877|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK163146|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171105|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171172|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171213|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171244|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171547|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK172306|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK172707|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK089535|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171116|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171193|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171236|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK150299|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK152918|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK155744|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171274|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK171562|Laptm5|16792|lysosomal-associated protein transmembrane 5	AK170438|Laptm5|16792|lysosomal-associated protein transmembrane 5	NM_010686|Laptm5|16792|lysosomal-associated protein transmembrane 5	BC020993|Laptm5|16792|lysosomal-associated protein transmembrane 5	BC055057|Laptm5|16792|lysosomal-associated protein transmembrane 5	BC114403|Laptm5|16792|lysosomal-associated protein transmembrane 5
mm9_v1_chr14_-_27489331_27489368	1.8687	BPTF.p2	BC064450|Pde12|211948|phosphodiesterase 12	NM_178668|Pde12|211948|phosphodiesterase 12	AK161083|Pde12|211948|phosphodiesterase 12
mm9_v1_chr6_-_48658211_48658242	1.86771	BPTF.p2	AK030902|Gimap6|231931|GTPase, IMAP family member 6	AK087275|Gimap6|231931|GTPase, IMAP family member 6	AF503921|Gimap6|231931|GTPase, IMAP family member 6	NM_153175|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr16_+_36184297_36184316	1.86643	BPTF.p2	AK089257|Gm5483|433016|predicted gene 5483	NM_001082547|Gm5483|433016|predicted gene 5483	BC147081|Gm5483|433016|predicted gene 5483	BC147082|Gm5483|433016|predicted gene 5483
mm9_v1_chr9_+_78243583_78243583	1.86462	BPTF.p2	NM_001191044|Ddx43|100048658|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
mm9_v1_chr9_+_114640266_114640368	1.86461	BPTF.p2	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr17_-_45796257_45796257	1.86437	BPTF.p2	AY578330|Capn11|268958|calpain 11	NM_001013767|Capn11|268958|calpain 11
mm9_v1_chr2_+_29917372_29917400	1.86421	BPTF.p2	AK172327|Set|56086|SET nuclear oncogene	AK014291|Set|56086|SET nuclear oncogene	AK031561|Set|56086|SET nuclear oncogene
mm9_v1_chr9_-_88417710_88417730	1.86376	BPTF.p2	BC032970|Snhg5|72655|small nucleolar RNA host gene 5	AK012825|Snhg5|72655|small nucleolar RNA host gene 5
mm9_v1_chr7_+_29225955_29226034	1.85873	BPTF.p2	AK009967|Gmfg|63986|glia maturation factor, gamma	NM_001039192|Gmfg|63986|glia maturation factor, gamma	AB003588|Gmfg|63986|glia maturation factor, gamma
mm9_v1_chr1_-_191994557_191994590	1.85714	BPTF.p2	BC051411|Prox1|19130|prospero-related homeobox 1	NM_008937|Prox1|19130|prospero-related homeobox 1	AK052889|Prox1|19130|prospero-related homeobox 1
mm9_v1_chr9_-_103267226_103267309	1.85582	BPTF.p2	AK172053|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	BC031362|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	NM_001134427|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	AK048941|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3
mm9_v1_chr12_+_8954734_8954801	1.8554	BPTF.p2	NM_010770|Matn3|17182|matrilin 3	AK160954|Matn3|17182|matrilin 3	Y10521|Matn3|17182|matrilin 3	AK048456|Matn3|17182|matrilin 3	BC071224|Matn3|17182|matrilin 3
mm9_v1_chrX_-_92853721_92853847	1.85414	BPTF.p2	AK129302|Zc4h2|245522|zinc finger, C4H2 domain containing	AK162005|Zc4h2|245522|zinc finger, C4H2 domain containing	AK086554|Zc4h2|245522|zinc finger, C4H2 domain containing	BC050850|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119285|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119311|Zc4h2|245522|zinc finger, C4H2 domain containing	BC079862|Zc4h2|245522|zinc finger, C4H2 domain containing	NM_001003916|Zc4h2|245522|zinc finger, C4H2 domain containing	AK155445|Zc4h2|245522|zinc finger, C4H2 domain containing
mm9_v1_chr13_+_103483611_103483765	1.84902	BPTF.p2	NM_008533|Cd180|17079|CD180 antigen	AK089613|Cd180|17079|CD180 antigen	AK089255|Cd180|17079|CD180 antigen	AK156548|Cd180|17079|CD180 antigen	D37797|Cd180|17079|CD180 antigen
mm9_v1_chr6_+_30400873_30400960	1.84875	BPTF.p2	
mm9_v1_chr9_-_113562595_113562606	1.8478	BPTF.p2	
mm9_v1_chr2_-_91773029_91773128	1.84723	BPTF.p2	
mm9_v1_chr19_+_10280522_10280595	1.84706	BPTF.p2	NM_001163431|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	BC058335|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene
mm9_v1_chr6_+_123073408_123073506	1.84524	BPTF.p2	AK049002|Clec4a2|26888|C-type lectin domain family 4, member a2	BC006623|Clec4a2|26888|C-type lectin domain family 4, member a2	BC075729|Clec4a2|26888|C-type lectin domain family 4, member a2
mm9_v1_chr15_+_81494399_81494424	1.84466	BPTF.p2	BC023933|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	BC030864|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK141810|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr4_+_126803283_126803296	1.84305	BPTF.p2	AK160613|Gm12942|100039968|predicted gene 12942	NM_001099319|Gm12942|100039968|predicted gene 12942
mm9_v1_chr11_-_54769546_54769594	1.84143	BPTF.p2	BC008186|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr15_-_75751888_75752008	1.83975	BPTF.p2	BC026536|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK013214|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK002912|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK012519|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK019237|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK004291|Pycrl|66194|pyrroline-5-carboxylate reductase-like	NM_025412|Pycrl|66194|pyrroline-5-carboxylate reductase-like
mm9_v1_chr8_-_108375786_108375962	1.83884	BPTF.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr7_+_77510266_77510283	1.83755	BPTF.p2	AK045070|B130024G19Rik|434198|RIKEN cDNA B130024G19 gene
mm9_v1_chr5_-_38874602_38874623	1.83611	BPTF.p2	AY776155|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001012363|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9
mm9_v1_chr3_+_116564564_116564609	1.83415	BPTF.p2	NM_009146|Frrs1|20321|ferric-chelate reductase 1	AK075573|Frrs1|20321|ferric-chelate reductase 1	AK144933|Frrs1|20321|ferric-chelate reductase 1	AK162693|Frrs1|20321|ferric-chelate reductase 1	D50464|Frrs1|20321|ferric-chelate reductase 1
mm9_v1_chr2_-_121332347_121332403	1.83151	BPTF.p2	BC005728|Mfap1b|100034361|microfibrillar-associated protein 1B	AK012688|Mfap1a|67532|microfibrillar-associated protein 1A	AK014483|Mfap1a|67532|microfibrillar-associated protein 1A	AK077604|Mfap1a|67532|microfibrillar-associated protein 1A	AK088766|Mfap1a|67532|microfibrillar-associated protein 1A	AK032586|Mfap1a|67532|microfibrillar-associated protein 1A	AK050561|Mfap1a|67532|microfibrillar-associated protein 1A	AK161000|Mfap1a|67532|microfibrillar-associated protein 1A	NM_026220|Mfap1a|67532|microfibrillar-associated protein 1A	AK168801|Mfap1a|67532|microfibrillar-associated protein 1A
mm9_v1_chr5_-_66418240_66418378	1.8284	BPTF.p2	AK040440|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr4_+_64785207_64785207	1.82836	BPTF.p2	NM_021362|Pappa|18491|pregnancy-associated plasma protein A
mm9_v1_chr17_-_43013320_43013409	1.82586	BPTF.p2	BC138374|Cd2ap|12488|CD2-associated protein	BC157901|Cd2ap|12488|CD2-associated protein	AK045218|Cd2ap|12488|CD2-associated protein	NM_009847|Cd2ap|12488|CD2-associated protein
mm9_v1_chr9_+_62225584_62225601	1.81779	BPTF.p2	AK166489|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr2_+_4802609_4802674	1.81733	BPTF.p2	BC066037|Sephs1|109079|selenophosphate synthetase 1	NM_175400|Sephs1|109079|selenophosphate synthetase 1	BC065165|Sephs1|109079|selenophosphate synthetase 1	AK044971|Sephs1|109079|selenophosphate synthetase 1
mm9_v1_chr16_+_48431349_48431418	1.81712	BPTF.p2	AF084945|Morc1|17450|microrchidia 1	NM_010816|Morc1|17450|microrchidia 1	BC030893|Morc1|17450|microrchidia 1
mm9_v1_chr17_+_37407160_37407208	1.81665	BPTF.p2	NM_013819|H2-M3|14991|histocompatibility 2, M region locus 3	BC031984|H2-M3|14991|histocompatibility 2, M region locus 3	U18797|H2-M3|14991|histocompatibility 2, M region locus 3
mm9_v1_chr17_-_71876150_71876196	1.8135	BPTF.p2	AK169427|Ndc80|67052|NDC80 homolog, kinetochore complex component (S. cerevisiae)	AK011497|Ndc80|67052|NDC80 homolog, kinetochore complex component (S. cerevisiae)	AF326730|Ndc80|67052|NDC80 homolog, kinetochore complex component (S. cerevisiae)	NM_023294|Ndc80|67052|NDC80 homolog, kinetochore complex component (S. cerevisiae)
mm9_v1_chr16_+_45610535_45610644	1.81235	BPTF.p2	AK036553|Gcet2|14525|germinal center expressed transcript 2	NM_001159297|Gcet2|14525|germinal center expressed transcript 2	NM_008099|Gcet2|14525|germinal center expressed transcript 2	U13263|Gcet2|14525|germinal center expressed transcript 2	BC099585|Gcet2|14525|germinal center expressed transcript 2	AY500830|Gcet2|14525|germinal center expressed transcript 2
mm9_v1_chr4_+_6292817_6292904	1.81202	BPTF.p2	AK169415|Sdcbp|53378|syndecan binding protein	NM_001098227|Sdcbp|53378|syndecan binding protein	NM_016807|Sdcbp|53378|syndecan binding protein	AK033412|Sdcbp|53378|syndecan binding protein	AF003693|Sdcbp|53378|syndecan binding protein	AK150721|Sdcbp|53378|syndecan binding protein	AK152080|Sdcbp|53378|syndecan binding protein	AK159677|Sdcbp|53378|syndecan binding protein	AK150623|Sdcbp|53378|syndecan binding protein	AK152552|Sdcbp|53378|syndecan binding protein	AK153112|Sdcbp|53378|syndecan binding protein	AK169219|Sdcbp|53378|syndecan binding protein	AK045668|Sdcbp|53378|syndecan binding protein	AK168004|Sdcbp|53378|syndecan binding protein	AK028429|Sdcbp|53378|syndecan binding protein	AK146085|Sdcbp|53378|syndecan binding protein	AK150544|Sdcbp|53378|syndecan binding protein	AK150996|Sdcbp|53378|syndecan binding protein	AK151050|Sdcbp|53378|syndecan binding protein	AK152017|Sdcbp|53378|syndecan binding protein	AK152434|Sdcbp|53378|syndecan binding protein	AK153042|Sdcbp|53378|syndecan binding protein	AK159538|Sdcbp|53378|syndecan binding protein	AK169687|Sdcbp|53378|syndecan binding protein	AK171162|Sdcbp|53378|syndecan binding protein	AK150707|Sdcbp|53378|syndecan binding protein	AK152001|Sdcbp|53378|syndecan binding protein	AK152577|Sdcbp|53378|syndecan binding protein	AK152855|Sdcbp|53378|syndecan binding protein	AK152109|Sdcbp|53378|syndecan binding protein	AK150801|Sdcbp|53378|syndecan binding protein	AK014678|Sdcbp|53378|syndecan binding protein	AK150321|Sdcbp|53378|syndecan binding protein	AK150661|Sdcbp|53378|syndecan binding protein	AK150736|Sdcbp|53378|syndecan binding protein	AK159124|Sdcbp|53378|syndecan binding protein	AK165657|Sdcbp|53378|syndecan binding protein	AK167513|Sdcbp|53378|syndecan binding protein	AK168777|Sdcbp|53378|syndecan binding protein	BC019400|Sdcbp|53378|syndecan binding protein	AK150278|Sdcbp|53378|syndecan binding protein	AF077527|Sdcbp|53378|syndecan binding protein	AK159323|Sdcbp|53378|syndecan binding protein
mm9_v1_chr11_+_98769464_98769464	1.81117	BPTF.p2	AJ009559|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)	AJ223087|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)	NM_011799|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)
mm9_v1_chrX_-_7544940_7545019	1.80923	BPTF.p2	NM_008089|Gata1|14460|GATA binding protein 1	X15763|Gata1|14460|GATA binding protein 1	BC052653|Gata1|14460|GATA binding protein 1	AK146915|Gata1|14460|GATA binding protein 1
mm9_v1_chr8_+_126869136_126869244	1.80855	BPTF.p2	
mm9_v1_chr16_-_32079317_32079415	1.80849	BPTF.p2	BC086650|Pak2|224105|p21 protein (Cdc42/Rac)-activated kinase 2	NM_177326|Pak2|224105|p21 protein (Cdc42/Rac)-activated kinase 2
mm9_v1_chr7_-_91763744_91763768	1.80782	BPTF.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr2_-_156688501_156688698	1.80526	BPTF.p2	BC042697|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK134962|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK134903|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK012005|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene	AK017271|5430405H02Rik|74487|RIKEN cDNA 5430405H02 gene
mm9_v1_chr4_+_144482722_144482729	1.80326	BPTF.p2	BC008980|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_001172424|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr17_+_50648736_50648932	1.8032	BPTF.p2	AB033615|Plcl2|224860|phospholipase C-like 2	NM_013880|Plcl2|224860|phospholipase C-like 2	AK165548|Plcl2|224860|phospholipase C-like 2	AK154288|Plcl2|224860|phospholipase C-like 2
mm9_v1_chr3_+_27215949_27216031	1.80158	BPTF.p2	AK153581|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK144931|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK142960|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK157633|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	NM_009425|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	U37522|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC138807|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC138808|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC011469|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10
mm9_v1_chr2_+_152673699_152673817	1.80049	BPTF.p2	NM_001141975|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_001141976|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_001141977|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_001141978|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	NM_028109|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK090101|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK153957|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	BC060619|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr6_+_124989830_124989833	1.79968	BPTF.p2	
mm9_v1_chr9_+_30750127_30750147	1.79767	BPTF.p2	AF175282|Adamts8|30806|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8	NM_013906|Adamts8|30806|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8
mm9_v1_chr7_-_151739579_151739635	1.79382	BPTF.p2	BC157936|Ppfia1|233977|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	BC158007|Ppfia1|233977|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	EU568869|Ppfia1|233977|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	NM_001033319|Ppfia1|233977|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	NM_001195086|Ppfia1|233977|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
mm9_v1_chr2_+_80479021_80479037	1.78667	BPTF.p2	AK009187|Nup35|69482|nucleoporin 35	AK145775|Nup35|69482|nucleoporin 35
mm9_v1_chr2_+_181501718_181501871	1.78553	BPTF.p2	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr14_-_122314994_122315068	1.78311	BPTF.p2	AK172401|Gpr18|110168|G protein-coupled receptor 18	BC034872|Gpr18|110168|G protein-coupled receptor 18	NM_182806|Gpr18|110168|G protein-coupled receptor 18	AK157029|Gpr18|110168|G protein-coupled receptor 18	AK156868|Gpr18|110168|G protein-coupled receptor 18	AK156039|Gpr18|110168|G protein-coupled receptor 18
mm9_v1_chr11_+_60955985_60956002	1.78151	BPTF.p2	AK155178|Tnfrsf13b|57916|tumor necrosis factor receptor superfamily, member 13b
mm9_v1_chr9_+_50583388_50583453	1.77733	BPTF.p2	AK086674|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK050335|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK149592|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK054293|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	BC021791|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	NM_133981|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)
mm9_v1_chr7_+_135056028_135056042	1.77012	BPTF.p2	AK029350|Myst1|67773|MYST histone acetyltransferase 1	AK146710|Myst1|67773|MYST histone acetyltransferase 1	AK003264|Myst1|67773|MYST histone acetyltransferase 1	AK132000|Myst1|67773|MYST histone acetyltransferase 1	NM_026370|Myst1|67773|MYST histone acetyltransferase 1	AK018002|Myst1|67773|MYST histone acetyltransferase 1	AK008418|Myst1|67773|MYST histone acetyltransferase 1	BC036284|Myst1|67773|MYST histone acetyltransferase 1
mm9_v1_chr8_-_23235509_23235538	1.7695	BPTF.p2	AK165108|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	BC053516|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK032672|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	NM_177898|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK054168|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5
mm9_v1_chr1_+_40522396_40522520	1.76444	BPTF.p2	AK089237|Il18r1|16182|interleukin 18 receptor 1	NM_001161842|Il18r1|16182|interleukin 18 receptor 1	AK170705|Il18r1|16182|interleukin 18 receptor 1	NM_001161843|Il18r1|16182|interleukin 18 receptor 1	BC023240|Il18r1|16182|interleukin 18 receptor 1
mm9_v1_chr18_+_4375599_4375605	1.7632	BPTF.p2	AK002680|Mtpap|67440|mitochondrial poly(A) polymerase	AK045203|Mtpap|67440|mitochondrial poly(A) polymerase	AK076565|Mtpap|67440|mitochondrial poly(A) polymerase	BC017535|Mtpap|67440|mitochondrial poly(A) polymerase	AK031070|Mtpap|67440|mitochondrial poly(A) polymerase
mm9_v1_chr10_+_41530379_41530379	1.76249	BPTF.p2	BC100403|Sesn1|140742|sestrin 1	NM_001162908|Sesn1|140742|sestrin 1
mm9_v1_chr1_-_65109982_65110015	1.7617	BPTF.p2	K02583|Crygd|12967|crystallin, gamma D	BC057013|Crygd|12967|crystallin, gamma D	AK136286|Crygd|12967|crystallin, gamma D	BC132116|Crygd|12967|crystallin, gamma D	BC132118|Crygd|12967|crystallin, gamma D	NM_007776|Crygd|12967|crystallin, gamma D
mm9_v1_chr11_-_107209443_107209486	1.75967	BPTF.p2	AK021206|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr3_+_145587194_145587422	1.75959	BPTF.p2	AK171687|Bcl10|12042|B-cell leukemia/lymphoma 10	AK156890|Bcl10|12042|B-cell leukemia/lymphoma 10	AK076082|Bcl10|12042|B-cell leukemia/lymphoma 10	AK172158|Bcl10|12042|B-cell leukemia/lymphoma 10	BC003703|Bcl10|12042|B-cell leukemia/lymphoma 10	AK169126|Bcl10|12042|B-cell leukemia/lymphoma 10	AK146236|Bcl10|12042|B-cell leukemia/lymphoma 10	AK168084|Bcl10|12042|B-cell leukemia/lymphoma 10	AK150883|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152563|Bcl10|12042|B-cell leukemia/lymphoma 10	AK152847|Bcl10|12042|B-cell leukemia/lymphoma 10	AF057701|Bcl10|12042|B-cell leukemia/lymphoma 10	AF100339|Bcl10|12042|B-cell leukemia/lymphoma 10	AF134396|Bcl10|12042|B-cell leukemia/lymphoma 10	NM_009740|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172007|Bcl10|12042|B-cell leukemia/lymphoma 10	BC172009|Bcl10|12042|B-cell leukemia/lymphoma 10	AJ006289|Bcl10|12042|B-cell leukemia/lymphoma 10	BC024379|Bcl10|12042|B-cell leukemia/lymphoma 10	AK140179|Bcl10|12042|B-cell leukemia/lymphoma 10	AF127387|Bcl10|12042|B-cell leukemia/lymphoma 10
mm9_v1_chr6_-_69765093_69765126	1.75873	BPTF.p2	
mm9_v1_chr17_+_37138107_37138107	1.75663	BPTF.p2	AK139625|Zfp57|22715|zinc finger protein 57	NM_001168502|Zfp57|22715|zinc finger protein 57
mm9_v1_chr1_-_175912844_175912974	1.75542	BPTF.p2	AF140672|Ifi202b|26388|interferon activated gene 202B	NM_008327|Ifi202b|26388|interferon activated gene 202B	NM_011940|Ifi202b|26388|interferon activated gene 202B
mm9_v1_chr7_+_54102451_54102582	1.75022	BPTF.p2	NM_001136069|Ldha|16828|lactate dehydrogenase A	U13687|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr7_-_3567703_3567758	1.7471	BPTF.p2	BC137776|Oscar|232790|osteoclast associated receptor	AF391159|Oscar|232790|osteoclast associated receptor	AF391161|Oscar|232790|osteoclast associated receptor	NM_175632|Oscar|232790|osteoclast associated receptor	AF391160|Oscar|232790|osteoclast associated receptor
mm9_v1_chr1_-_175961813_175961885	1.74563	BPTF.p2	AK040191|Ifi205|226695|interferon activated gene 205	BC055888|Ifi202b|26388|interferon activated gene 202B	BC018233|Ifi202b|26388|interferon activated gene 202B	BC040425|Ifi205|226695|interferon activated gene 205	NM_172648|Ifi205|226695|interferon activated gene 205
mm9_v1_chr1_+_152166546_152166560	1.7446	BPTF.p2	AK020798|Pdc|20028|phosducin	L08075|Pdc|20028|phosducin	NM_001159730|Pdc|20028|phosducin	NM_024458|Pdc|20028|phosducin	BC021920|Pdc|20028|phosducin	BC037176|Pdc|20028|phosducin	BC012507|Pdc|20028|phosducin
mm9_v1_chr1_-_133173495_133173524	1.74079	BPTF.p2	BC037446|Ikbke|56489|inhibitor of kappaB kinase epsilon
mm9_v1_chr1_-_154725297_154725297	1.7401	BPTF.p2	AK129101|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001160257|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr12_+_60114357_60114456	1.73989	BPTF.p2	AK005928|Sip1|66603|survival of motor neuron protein interacting protein 1	AK007515|Sip1|66603|survival of motor neuron protein interacting protein 1	NM_025656|Sip1|66603|survival of motor neuron protein interacting protein 1	AK013414|Sip1|66603|survival of motor neuron protein interacting protein 1	BC053424|Sip1|66603|survival of motor neuron protein interacting protein 1
mm9_v1_chr12_+_88075318_88075318	1.73777	BPTF.p2	NM_001195767|Gm6772|627607|predicted gene 6772
mm9_v1_chr5_-_130478687_130478765	1.73496	BPTF.p2	AK159564|Gusb|110006|glucuronidase, beta	AK041058|Gusb|110006|glucuronidase, beta	AK150048|Gusb|110006|glucuronidase, beta	AK151802|Gusb|110006|glucuronidase, beta	AK152206|Gusb|110006|glucuronidase, beta	AK159163|Gusb|110006|glucuronidase, beta	AK159526|Gusb|110006|glucuronidase, beta	AK159804|Gusb|110006|glucuronidase, beta	AK162436|Gusb|110006|glucuronidase, beta	J03047|Gusb|110006|glucuronidase, beta	M19279|Gusb|110006|glucuronidase, beta	M28540|Gusb|110006|glucuronidase, beta	M28541|Gusb|110006|glucuronidase, beta	M63836|Gusb|110006|glucuronidase, beta	NM_010368|Gusb|110006|glucuronidase, beta	BC071226|Gusb|110006|glucuronidase, beta	AK149814|Gusb|110006|glucuronidase, beta	AK076109|Gusb|110006|glucuronidase, beta	BC004616|Gusb|110006|glucuronidase, beta	AK002832|Gusb|110006|glucuronidase, beta	AK136519|Gusb|110006|glucuronidase, beta
mm9_v1_chr1_-_183112962_183112965	1.73402	BPTF.p2	AK167017|Wdr26|226757|WD repeat domain 26	AK167116|Wdr26|226757|WD repeat domain 26
mm9_v1_chr14_-_64162810_64162839	1.72636	BPTF.p2	AK044957|Mtmr9|210376|myotubularin related protein 9
mm9_v1_chr13_+_52692221_52692252	1.72369	BPTF.p2	AK143564|Sykb|20963|spleen tyrosine kinase	NM_011518|Sykb|20963|spleen tyrosine kinase	U36776|Sykb|20963|spleen tyrosine kinase	AK136363|Sykb|20963|spleen tyrosine kinase
mm9_v1_chr14_+_55551531_55551607	1.72066	BPTF.p2	BC120568|Il25|140806|interleukin 25	BC125524|Il25|140806|interleukin 25	BC144962|Il25|140806|interleukin 25	NM_080729|Il25|140806|interleukin 25	AF458060|Il25|140806|interleukin 25
mm9_v1_chr10_-_14465464_14465593	1.71637	BPTF.p2	AK209652|Hspa8|15481|heat shock protein 8	AK192102|Hspa8|15481|heat shock protein 8
mm9_v1_chr5_+_32794685_32794762	1.71159	BPTF.p2	AK017392|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr1_+_169280112_169280187	1.7106	BPTF.p2	AK165730|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	NM_019993|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK154914|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK168261|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK168309|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK168878|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AB296386|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1
mm9_v1_chr11_+_105946215_105946222	1.71054	BPTF.p2	NM_011947|Map3k3|26406|mitogen-activated protein kinase kinase kinase 3	BC023781|Map3k3|26406|mitogen-activated protein kinase kinase kinase 3
mm9_v1_chr9_-_48288689_48288691	1.71054	BPTF.p2	AK172641|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr9_+_37421361_37421439	1.7085	BPTF.p2	AK028598|Siae|22619|sialic acid acetylesterase	AK165103|Siae|22619|sialic acid acetylesterase	AK043392|Siae|22619|sialic acid acetylesterase	AK167103|Siae|22619|sialic acid acetylesterase	AK164852|Siae|22619|sialic acid acetylesterase	U40408|Siae|22619|sialic acid acetylesterase	AK028656|Siae|22619|sialic acid acetylesterase	NM_011734|Siae|22619|sialic acid acetylesterase	U61183|Siae|22619|sialic acid acetylesterase	X98625|Siae|22619|sialic acid acetylesterase	BC007136|Siae|22619|sialic acid acetylesterase
mm9_v1_chr13_+_74777303_74777332	1.70707	BPTF.p2	BC046610|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK159406|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK030329|Erap1|80898|endoplasmic reticulum aminopeptidase 1	NM_030711|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK029841|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK036559|Erap1|80898|endoplasmic reticulum aminopeptidase 1
mm9_v1_chr1_-_63160764_63160840	1.70512	BPTF.p2	AK049468|Ino80d|227195|INO80 complex subunit D	NM_001081436|Ino80d|227195|INO80 complex subunit D	NM_001114609|Ino80d|227195|INO80 complex subunit D
mm9_v1_chr12_-_55796770_55796822	1.70312	BPTF.p2	AY882557|Eapp|66266|E2F-associated phosphoprotein	AK007442|Eapp|66266|E2F-associated phosphoprotein	AK012800|Eapp|66266|E2F-associated phosphoprotein
mm9_v1_chr9_-_44788402_44788513	1.6987	BPTF.p2	EF474453|Cd3g|12502|CD3 antigen, gamma polypeptide	GU456630|Cd3g|12502|CD3 antigen, gamma polypeptide	M58149|Cd3g|12502|CD3 antigen, gamma polypeptide	AK153987|Cd3g|12502|CD3 antigen, gamma polypeptide	AK153980|Cd3g|12502|CD3 antigen, gamma polypeptide	BC027528|Cd3g|12502|CD3 antigen, gamma polypeptide	AK134049|Cd3g|12502|CD3 antigen, gamma polypeptide	NM_009850|Cd3g|12502|CD3 antigen, gamma polypeptide
mm9_v1_chr11_-_99665759_99665763	1.69752	BPTF.p2	AK009035|Krtap4-13|69464|keratin associated protein 4-13	NM_001099312|Gm11569|670472|predicted gene 11569	NM_001099313|Gm11554|670482|predicted gene 11554	NM_027087|Krtap4-13|69464|keratin associated protein 4-13
mm9_v1_chr6_-_57929295_57929295	1.69255	BPTF.p2	NM_053238|Vmn1r25|113865|vomeronasal 1 receptor 25
mm9_v1_chr4_-_61100653_61100734	1.68975	BPTF.p2	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2
mm9_v1_chr1_-_163718415_163718625	1.68941	BPTF.p2	AF288572|Fasl|14103|Fas ligand (TNF superfamily, member 6)	DQ846747|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U58995|Fasl|14103|Fas ligand (TNF superfamily, member 6)	S76752|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AF119335|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U06948|Fasl|14103|Fas ligand (TNF superfamily, member 6)	U10984|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK141268|Fasl|14103|Fas ligand (TNF superfamily, member 6)	AK040139|Fasl|14103|Fas ligand (TNF superfamily, member 6)	NM_010177|Fasl|14103|Fas ligand (TNF superfamily, member 6)
mm9_v1_chr4_-_145749008_145749008	1.68543	BPTF.p2	NM_001085522|Gm13251|433791|predicted gene 13251
mm9_v1_chr6_+_108804370_108804373	1.6849	BPTF.p2	AK193028|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1
mm9_v1_chr10_+_87321789_87322010	1.68414	BPTF.p2	NM_001111275|Igf1|16000|insulin-like growth factor 1	NM_010512|Igf1|16000|insulin-like growth factor 1	AK050118|Igf1|16000|insulin-like growth factor 1	AK081019|Igf1|16000|insulin-like growth factor 1	AK165471|Igf1|16000|insulin-like growth factor 1	AY878192|Igf1|16000|insulin-like growth factor 1	AY878193|Igf1|16000|insulin-like growth factor 1	AK052033|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr9_-_63225646_63225720	1.68399	BPTF.p2	BC013697|Map2k5|23938|mitogen-activated protein kinase kinase 5	AB019374|Map2k5|23938|mitogen-activated protein kinase kinase 5	NM_011840|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK020716|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK159261|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK166137|Map2k5|23938|mitogen-activated protein kinase kinase 5
mm9_v1_chr17_-_21982590_21982733	1.68067	BPTF.p2	AK148228|Zfp820|75424|zinc finger protein 820	AK011694|Zfp820|75424|zinc finger protein 820	NM_029281|Zfp820|75424|zinc finger protein 820	BC019219|Zfp820|75424|zinc finger protein 820
mm9_v1_chr7_+_25689409_25689425	1.67994	BPTF.p2	BC012488|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr18_+_80403577_80403580	1.67972	BPTF.p2	AK004039|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr11_-_81387006_81387040	1.67868	BPTF.p2	BC139179|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	BC139181|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	AK131752|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	NM_001033765|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene
mm9_v1_chr11_-_61575474_61575589	1.67858	BPTF.p2	BC051438|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC106185|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK076811|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK077330|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK038680|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC023178|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164242|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164243|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164244|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_144806|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2
mm9_v1_chr13_+_52678866_52678871	1.67838	BPTF.p2	BC065121|Sykb|20963|spleen tyrosine kinase
mm9_v1_chr5_-_17341534_17341556	1.67821	BPTF.p2	L23108|Cd36|12491|CD36 antigen	AK151355|Cd36|12491|CD36 antigen
mm9_v1_chr10_-_127999933_127999966	1.67489	BPTF.p2	AK205907|Pa2g4|18813|proliferation-associated 2G4	AK207779|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr10_+_117878101_117878253	1.67416	BPTF.p2	M28621|Ifng|15978|interferon gamma	AK089574|Ifng|15978|interferon gamma	NM_008337|Ifng|15978|interferon gamma	K00083|Ifng|15978|interferon gamma	FJ617514|Ifng|15978|interferon gamma	FJ617515|Ifng|15978|interferon gamma	FJ617516|Ifng|15978|interferon gamma	BC119063|Ifng|15978|interferon gamma	BC119065|Ifng|15978|interferon gamma	EF423643|Ifng|15978|interferon gamma	AY423847|Ifng|15978|interferon gamma
mm9_v1_chr1_-_156993820_156993943	1.67039	BPTF.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr10_-_93002725_93002777	1.66902	BPTF.p2	AK005066|Amdhd1|71761|amidohydrolase domain containing 1	BC121826|Amdhd1|71761|amidohydrolase domain containing 1	BC118616|Amdhd1|71761|amidohydrolase domain containing 1	AK090143|Amdhd1|71761|amidohydrolase domain containing 1	NM_027908|Amdhd1|71761|amidohydrolase domain containing 1
mm9_v1_chr17_-_71202829_71202871	1.66743	BPTF.p2	AK160193|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164074|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr7_-_52409783_52409953	1.66476	BPTF.p2	AK209303|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK220200|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK169346|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK030673|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144967|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK151691|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	BC013548|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	NM_145954|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144995|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK161198|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK170276|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK164374|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1
mm9_v1_chr7_-_19865386_19865397	1.66306	BPTF.p2	BC096372|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	AK044232|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	AK044334|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	NM_177691|Ppm1n|232941|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
mm9_v1_chr17_-_10512094_10512209	1.65782	BPTF.p2	BC053426|Qk|19317|quaking
mm9_v1_chr17_+_25960571_25960660	1.65563	BPTF.p2	NM_173741|Wdr24|268933|WD repeat domain 24	AK078694|Wdr24|268933|WD repeat domain 24	AK170253|Wdr24|268933|WD repeat domain 24	BC037651|Wdr24|268933|WD repeat domain 24
mm9_v1_chr14_-_57430243_57430300	1.65538	BPTF.p2	AK156501|Zmym5|219105|zinc finger, MYM-type 5
mm9_v1_chr13_-_22133203_22133232	1.65222	BPTF.p2	BC052219|Hist1h4i|319158|histone cluster 1, H4i	BC125598|Hist1h4i|319158|histone cluster 1, H4i	BC125600|Hist1h4i|319158|histone cluster 1, H4i	BC019757|Hist1h4i|319158|histone cluster 1, H4i	BC092144|Hist1h4i|319158|histone cluster 1, H4i	NM_175656|Hist1h4i|319158|histone cluster 1, H4i	AK011560|Hist1h4i|319158|histone cluster 1, H4i
mm9_v1_chr13_-_120197722_120197851	1.64902	BPTF.p2	AK050478|Nnt|18115|nicotinamide nucleotide transhydrogenase	Z49204|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK052061|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK033282|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK040460|Nnt|18115|nicotinamide nucleotide transhydrogenase	BC008518|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK129006|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK084546|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK084604|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK087064|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK088044|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK159694|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK052234|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK054332|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK083413|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK085903|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK168736|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK090115|Nnt|18115|nicotinamide nucleotide transhydrogenase	NM_008710|Nnt|18115|nicotinamide nucleotide transhydrogenase
mm9_v1_chrX_-_94572488_94572554	1.64796	BPTF.p2	BC106845|Eda2r|245527|ectodysplasin A2 receptor	AK034909|Eda2r|245527|ectodysplasin A2 receptor	AK080072|Eda2r|245527|ectodysplasin A2 receptor	NM_001161432|Eda2r|245527|ectodysplasin A2 receptor	NM_001161433|Eda2r|245527|ectodysplasin A2 receptor	NM_175540|Eda2r|245527|ectodysplasin A2 receptor	AK049134|Eda2r|245527|ectodysplasin A2 receptor
mm9_v1_chr5_+_121311429_121311430	1.64613	BPTF.p2	AK135899|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	AB067530|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	NM_001159934|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	NM_145228|Oas1h|246729|2'-5' oligoadenylate synthetase 1H
mm9_v1_chr19_+_11543816_11544022	1.64607	BPTF.p2	NM_001166376|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C	NM_028595|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C	AK008652|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C	AF237910|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C	BC062247|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C	AK075852|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C	AK150397|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C	AK152258|Ms4a6c|73656|membrane-spanning 4-domains, subfamily A, member 6C
mm9_v1_chr19_+_4154645_4154678	1.64527	BPTF.p2	NM_016933|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	AK088334|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	AK165203|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	BC013273|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	BC100560|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein	D10105|Ptprcap|19265|protein tyrosine phosphatase, receptor type, C polypeptide-associated protein
mm9_v1_chr10_+_34109784_34109787	1.64506	BPTF.p2	NM_009925|Col10a1|12813|collagen, type X, alpha 1
mm9_v1_chr6_-_129225348_129225390	1.64068	BPTF.p2	BC139135|Cd69|12515|CD69 antigen	BC139136|Cd69|12515|CD69 antigen	BC106997|Cd69|12515|CD69 antigen	BC128272|Cd69|12515|CD69 antigen	BC128273|Cd69|12515|CD69 antigen	AK017979|Cd69|12515|CD69 antigen	AK151076|Cd69|12515|CD69 antigen	AK153224|Cd69|12515|CD69 antigen	AK171645|Cd69|12515|CD69 antigen	NM_001033122|Cd69|12515|CD69 antigen
mm9_v1_chr16_-_79091336_79091341	1.63952	BPTF.p2	NM_008941|Tmprss15|19146|transmembrane protease, serine 15	U73378|Tmprss15|19146|transmembrane protease, serine 15	BC117917|Tmprss15|19146|transmembrane protease, serine 15	BC117918|Tmprss15|19146|transmembrane protease, serine 15	AK033582|Tmprss15|19146|transmembrane protease, serine 15	NM_178855|Tmprss15|19146|transmembrane protease, serine 15
mm9_v1_chr5_-_149864518_149864637	1.63841	BPTF.p2	L38477|Hmgb1|15289|high mobility group box 1	Z11997|Hmgb1|15289|high mobility group box 1	BC083067|Hmgb1|15289|high mobility group box 1	AK051800|Hmgb1|15289|high mobility group box 1	BC111468|Hmgb1|15289|high mobility group box 1	BC085090|Hmgb1|15289|high mobility group box 1	BC006586|Hmgb1|15289|high mobility group box 1	AK146420|Hmgb1|15289|high mobility group box 1	AK166007|Hmgb1|15289|high mobility group box 1	BC091741|Hmgb1|15289|high mobility group box 1	BC008565|Hmgb1|15289|high mobility group box 1	AK087949|Hmgb1|15289|high mobility group box 1	AK144428|Hmgb1|15289|high mobility group box 1	BC100312|Hmgb1|15289|high mobility group box 1	AK082902|Hmgb1|15289|high mobility group box 1	BC094030|Hmgb1|15289|high mobility group box 1	U00431|Hmgb1|15289|high mobility group box 1	AK084841|Hmgb1|15289|high mobility group box 1	AK157846|Hmgb1|15289|high mobility group box 1	NM_010439|Hmgb1|15289|high mobility group box 1	AK050659|Hmgb1|15289|high mobility group box 1	AK150924|Hmgb1|15289|high mobility group box 1
mm9_v1_chr13_-_113717570_113717607	1.63772	BPTF.p2	AK077924|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	BC029230|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	AK012158|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	NM_028151|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	AK078091|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)
mm9_v1_chr1_-_141456740_141456821	1.63559	BPTF.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr7_-_29164215_29164277	1.63371	BPTF.p2	M58565|Zfp36|22695|zinc finger protein 36	BC021391|Zfp36|22695|zinc finger protein 36	M57422|Zfp36|22695|zinc finger protein 36	NM_011756|Zfp36|22695|zinc finger protein 36	AK088525|Zfp36|22695|zinc finger protein 36	AK005006|Zfp36|22695|zinc finger protein 36	AK154825|Zfp36|22695|zinc finger protein 36
mm9_v1_chr1_-_39634096_39634285	1.63325	BPTF.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr1_+_52176281_52176465	1.63169	BPTF.p2	AK039458|Stat1|20846|signal transducer and activator of transcription 1	NM_009283|Stat1|20846|signal transducer and activator of transcription 1	AK159887|Stat1|20846|signal transducer and activator of transcription 1	AK082706|Stat1|20846|signal transducer and activator of transcription 1	AK018544|Stat1|20846|signal transducer and activator of transcription 1	AK041599|Stat1|20846|signal transducer and activator of transcription 1	AK041814|Stat1|20846|signal transducer and activator of transcription 1	AK084855|Stat1|20846|signal transducer and activator of transcription 1	BC004808|Stat1|20846|signal transducer and activator of transcription 1	AK088874|Stat1|20846|signal transducer and activator of transcription 1	AK157458|Stat1|20846|signal transducer and activator of transcription 1	AK157263|Stat1|20846|signal transducer and activator of transcription 1	AK046517|Stat1|20846|signal transducer and activator of transcription 1
mm9_v1_chr7_-_111042984_111042984	1.62955	BPTF.p2	NM_013617|Olfr64|18366|olfactory receptor 64
mm9_v1_chr16_+_14361637_14361715	1.62816	BPTF.p2	AK029876|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_008576|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AK150015|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AK152781|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	BC090617|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AF022908|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
mm9_v1_chr16_+_23609986_23610176	1.62788	BPTF.p2	NM_023386|Rtp4|67775|receptor transporter protein 4	AK018021|Rtp4|67775|receptor transporter protein 4	AJ251364|Rtp4|67775|receptor transporter protein 4	AK007477|Rtp4|67775|receptor transporter protein 4	BC024872|Rtp4|67775|receptor transporter protein 4	AY562228|Rtp4|67775|receptor transporter protein 4
mm9_v1_chr2_-_60719361_60719568	1.6277	BPTF.p2	AK161102|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK164307|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK145897|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	NM_001141931|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	NM_001141932|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	BC057866|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr14_-_21315902_21316122	1.6271	BPTF.p2	AK014794|Zmynd17|74843|zinc finger, MYND domain containing 17	BC119773|Zmynd17|74843|zinc finger, MYND domain containing 17	BC119816|Zmynd17|74843|zinc finger, MYND domain containing 17	NM_029104|Zmynd17|74843|zinc finger, MYND domain containing 17
mm9_v1_chr18_-_62915799_62916000	1.62404	BPTF.p2	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr16_-_20426357_20426468	1.62288	BPTF.p2	BC042581|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB019003|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC090629|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC061132|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_013790|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_176839|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr11_-_104411728_104411933	1.61956	BPTF.p2	AK039377|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK148278|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC023187|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK161471|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC157955|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172100|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172149|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	NM_145436|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)
mm9_v1_chr13_-_21924019_21924045	1.61936	BPTF.p2	BC115446|Hist1h4f|319157|histone cluster 1, H4f	BC115448|Hist1h4n|319161|histone cluster 1, H4n	BC152397|Hist1h4n|319161|histone cluster 1, H4n	NM_175657|Hist1h4n|319161|histone cluster 1, H4n
mm9_v1_chr10_-_20444654_20444883	1.61826	BPTF.p2	AF190639|Pde7b|29863|phosphodiesterase 7B	BC130267|Pde7b|29863|phosphodiesterase 7B	AK020137|Pde7b|29863|phosphodiesterase 7B	AK040876|Pde7b|29863|phosphodiesterase 7B	NM_013875|Pde7b|29863|phosphodiesterase 7B	AK035385|Pde7b|29863|phosphodiesterase 7B
mm9_v1_chr10_+_41607235_41607307	1.6176	BPTF.p2	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chr9_+_114373337_114373344	1.61681	BPTF.p2	AK219055|Glb1|12091|galactosidase, beta 1
mm9_v1_chr4_-_44181148_44181210	1.61299	BPTF.p2	AK044324|Rnf38|73469|ring finger protein 38	NM_001038993|Rnf38|73469|ring finger protein 38	AK147608|Rnf38|73469|ring finger protein 38
mm9_v1_chr7_-_3867085_3867115	1.61152	BPTF.p2	BC119598|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011087|Pira1|18722|paired-Ig-like receptor A1	U96682|Pira1|18722|paired-Ig-like receptor A1	BC127613|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	BC128500|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	U96684|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK152898|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011090|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK030846|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK054162|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
mm9_v1_chr6_+_146754051_146754051	1.6088	BPTF.p2	AY005163|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	AY014836|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108965|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108966|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ322241|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ355143|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	NM_172309|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2
mm9_v1_chr17_-_71201055_71201077	1.60674	BPTF.p2	BC012700|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164075|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr10_-_119638448_119638648	1.60609	BPTF.p2	AJ440757|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120829|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120831|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC144835|Irak3|73914|interleukin-1 receptor-associated kinase 3	AF461763|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK029057|Irak3|73914|interleukin-1 receptor-associated kinase 3	NM_028679|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK049210|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK014783|Irak3|73914|interleukin-1 receptor-associated kinase 3
mm9_v1_chr11_-_110112926_110113089	1.60429	BPTF.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr9_-_36540210_36540345	1.60403	BPTF.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr4_-_125879832_125879953	1.60306	BPTF.p2	AK034044|Thrap3|230753|thyroid hormone receptor associated protein 3	AK079601|Thrap3|230753|thyroid hormone receptor associated protein 3	BC026580|Thrap3|230753|thyroid hormone receptor associated protein 3	BC092239|Thrap3|230753|thyroid hormone receptor associated protein 3	AK169008|Thrap3|230753|thyroid hormone receptor associated protein 3	BC048391|Thrap3|230753|thyroid hormone receptor associated protein 3	NM_146153|Thrap3|230753|thyroid hormone receptor associated protein 3
mm9_v1_chr5_-_66542161_66542216	1.60085	BPTF.p2	AK035620|Rbm47|245945|RNA binding motif protein 47	AK142584|Rbm47|245945|RNA binding motif protein 47	AK085733|Rbm47|245945|RNA binding motif protein 47	NM_178446|Rbm47|245945|RNA binding motif protein 47	BC112902|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr4_-_132288396_132288408	1.60081	BPTF.p2	BC057035|Xkr8|381560|X Kell blood group precursor related family member 8 homolog
mm9_v1_chr2_+_109857966_109858261	1.59883	BPTF.p2	AK147056|Ccdc34|68201|coiled-coil domain containing 34	NM_026613|Ccdc34|68201|coiled-coil domain containing 34	BC108339|Ccdc34|68201|coiled-coil domain containing 34	AK019172|Ccdc34|68201|coiled-coil domain containing 34	AK033555|Ccdc34|68201|coiled-coil domain containing 34	AK019247|Ccdc34|68201|coiled-coil domain containing 34	AK012383|Ccdc34|68201|coiled-coil domain containing 34	BC062248|Ccdc34|68201|coiled-coil domain containing 34	AK014021|Ccdc34|68201|coiled-coil domain containing 34	BC089458|Ccdc34|68201|coiled-coil domain containing 34	BC049229|Ccdc34|68201|coiled-coil domain containing 34
mm9_v1_chr3_+_132772586_132772695	1.5985	BPTF.p2	AK015941|Ints12|71793|integrator complex subunit 12
mm9_v1_chr12_-_92828018_92828088	1.59849	BPTF.p2	AF250834|Gtf2a1|83602|general transcription factor II A, 1	BC079909|Gtf2a1|83602|general transcription factor II A, 1	AK139996|Gtf2a1|83602|general transcription factor II A, 1	NM_031391|Gtf2a1|83602|general transcription factor II A, 1
mm9_v1_chr7_+_27593910_27593945	1.59573	BPTF.p2	BC046321|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	AK014160|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	BC058222|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	L81171|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	NM_013809|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1
mm9_v1_chr7_-_134158693_134158794	1.59427	BPTF.p2	
mm9_v1_chr16_-_36408420_36408542	1.594	BPTF.p2	M92418|Stfa2|20862|stefin A2	NM_001082545|Stfa2|20862|stefin A2	BC138004|Stfa2|20862|stefin A2
mm9_v1_chr10_+_126503214_126503242	1.59279	BPTF.p2	AK012202|Cdk4|12567|cyclin-dependent kinase 4
mm9_v1_chr1_+_45852310_45852408	1.59116	BPTF.p2	BC085177|Wdr75|73674|WD repeat domain 75	BC117880|Wdr75|73674|WD repeat domain 75	BC117881|Wdr75|73674|WD repeat domain 75	AK010772|Wdr75|73674|WD repeat domain 75	AK152412|Wdr75|73674|WD repeat domain 75	AK168163|Wdr75|73674|WD repeat domain 75	NM_028599|Wdr75|73674|WD repeat domain 75	AK169932|Wdr75|73674|WD repeat domain 75	AK168032|Wdr75|73674|WD repeat domain 75	AK163221|Wdr75|73674|WD repeat domain 75	AK199189|Wdr75|73674|WD repeat domain 75	AK207424|Wdr75|73674|WD repeat domain 75
mm9_v1_chr7_+_73205454_73205492	1.58997	BPTF.p2	BC013777|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	BC029642|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AF230356|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr10_+_62706550_62706579	1.58897	BPTF.p2	AK019546|Herc4|67345|hect domain and RLD 4
mm9_v1_chr6_-_131243197_131243269	1.58867	BPTF.p2	BC027505|Magohb|66441|mago-nashi homolog B (Drosophila)	AK007769|Magohb|66441|mago-nashi homolog B (Drosophila)	AK013310|Magohb|66441|mago-nashi homolog B (Drosophila)	AK006303|Magohb|66441|mago-nashi homolog B (Drosophila)	AK008200|Magohb|66441|mago-nashi homolog B (Drosophila)	NM_025564|Magohb|66441|mago-nashi homolog B (Drosophila)
mm9_v1_chr8_+_18595130_18595172	1.5881	BPTF.p2	AK083572|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK138858|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK042026|Mcph1|244329|microcephaly, primary autosomal recessive 1	BC056924|Mcph1|244329|microcephaly, primary autosomal recessive 1	NM_173189|Mcph1|244329|microcephaly, primary autosomal recessive 1
mm9_v1_chr3_+_95354031_95354039	1.58556	BPTF.p2	AJ223208|Ctss|13040|cathepsin S
mm9_v1_chr12_-_80190607_80190656	1.58503	BPTF.p2	BC086806|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK030744|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK020902|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK167892|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	NM_029988|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H
mm9_v1_chrX_-_35772763_35772868	1.58379	BPTF.p2	
mm9_v1_chr16_+_32179885_32179885	1.58199	BPTF.p2	AK157452|Bex6|328660|brain expressed gene 6	AY833559|Bex6|328660|brain expressed gene 6	NM_001033539|Bex6|328660|brain expressed gene 6
mm9_v1_chr5_+_110660011_110660183	1.58042	BPTF.p2	AK132187|Ankle2|71782|ankyrin repeat and LEM domain containing 2	BC065071|Ankle2|71782|ankyrin repeat and LEM domain containing 2	NM_027922|Ankle2|71782|ankyrin repeat and LEM domain containing 2	AK043925|Ankle2|71782|ankyrin repeat and LEM domain containing 2
mm9_v1_chr2_-_11524766_11524903	1.57997	BPTF.p2	AK012296|Rbm17|76938|RNA binding motif protein 17	BC034896|Rbm17|76938|RNA binding motif protein 17	NM_152824|Rbm17|76938|RNA binding motif protein 17
mm9_v1_chr9_-_22064292_22064338	1.57943	BPTF.p2	AK032725|Zfp599|235048|zinc finger protein 599	BC050092|Zfp599|235048|zinc finger protein 599	NM_181419|Zfp599|235048|zinc finger protein 599
mm9_v1_chr6_-_3295980_3296101	1.57886	BPTF.p2	AK035387|9530028C05|330256|hypothetical protein 9530028C05
mm9_v1_chrX_-_91368713_91368747	1.57753	BPTF.p2	L19714|Zfx|22764|zinc finger protein X-linked	AK145115|Zfx|22764|zinc finger protein X-linked	NM_001044386|Zfx|22764|zinc finger protein X-linked	NM_011768|Zfx|22764|zinc finger protein X-linked
mm9_v1_chrX_-_100678555_100678592	1.57629	BPTF.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr18_-_32071556_32071556	1.57441	BPTF.p2	NM_026006|Sft2d3|67158|SFT2 domain containing 3
mm9_v1_chr9_+_96159123_96159160	1.5726	BPTF.p2	NM_001184709|Tfdp2|211586|transcription factor Dp 2	AK033356|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr13_-_54570167_54570211	1.57019	BPTF.p2	BC019603|Thoc3|73666|THO complex 3	AK010668|Thoc3|73666|THO complex 3	NM_028597|Thoc3|73666|THO complex 3
mm9_v1_chr6_+_135313010_135313048	1.57003	BPTF.p2	AK158369|Emp1|13730|epithelial membrane protein 1	AK159752|Emp1|13730|epithelial membrane protein 1	AK171061|Emp1|13730|epithelial membrane protein 1	AK172607|Emp1|13730|epithelial membrane protein 1	AK157366|Emp1|13730|epithelial membrane protein 1	AK171675|Emp1|13730|epithelial membrane protein 1	AK172705|Emp1|13730|epithelial membrane protein 1	BC034257|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr19_-_29409041_29409159	1.5693	BPTF.p2	BC111817|Rln1|19773|relaxin 1	BC148202|Rln1|19773|relaxin 1	Z27088|Rln1|19773|relaxin 1	BC132654|Rln1|19773|relaxin 1	BC132656|Rln1|19773|relaxin 1	NM_011272|Rln1|19773|relaxin 1
mm9_v1_chr18_-_3281709_3281744	1.56522	BPTF.p2	AJ292222|Crem|12916|cAMP responsive element modulator	AJ311667|Crem|12916|cAMP responsive element modulator	S67786|Crem|12916|cAMP responsive element modulator	NM_001110854|Crem|12916|cAMP responsive element modulator	NM_001110855|Crem|12916|cAMP responsive element modulator
mm9_v1_chr13_-_100972022_100972078	1.56507	BPTF.p2	AF102871|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135489|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF135490|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AF381770|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147000|Naip2|17948|NLR family, apoptosis inhibitory protein 2	AY147001|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_001126182|Naip2|17948|NLR family, apoptosis inhibitory protein 2	NM_010872|Naip2|17948|NLR family, apoptosis inhibitory protein 2
mm9_v1_chr9_-_70351520_70351611	1.56361	BPTF.p2	AK171932|Rnf111|93836|ring finger 111	AF330197|Rnf111|93836|ring finger 111	NM_033604|Rnf111|93836|ring finger 111
mm9_v1_chr2_-_155999858_155999931	1.5631	BPTF.p2	BC082607|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr4_-_70071302_70071482	1.56135	BPTF.p2	BC086696|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK013550|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	AK129411|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	NM_145990|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2	BC079888|Cdk5rap2|214444|CDK5 regulatory subunit associated protein 2
mm9_v1_chr17_-_57217861_57217938	1.56044	BPTF.p2	AK040537|Dennd1c|70785|DENN/MADD domain containing 1C	AK170891|Dennd1c|70785|DENN/MADD domain containing 1C	BC035208|Dennd1c|70785|DENN/MADD domain containing 1C	NM_153551|Dennd1c|70785|DENN/MADD domain containing 1C	AK014482|Dennd1c|70785|DENN/MADD domain containing 1C
mm9_v1_chr10_+_62409776_62409857	1.56024	BPTF.p2	NM_177372|Dna2|327762|DNA replication helicase 2 homolog (yeast)	AK129051|Dna2|327762|DNA replication helicase 2 homolog (yeast)	AK028381|Dna2|327762|DNA replication helicase 2 homolog (yeast)	BC115716|Dna2|327762|DNA replication helicase 2 homolog (yeast)	BC030382|Dna2|327762|DNA replication helicase 2 homolog (yeast)
mm9_v1_chr19_+_6085096_6085130	1.55924	BPTF.p2	NM_026410|Cdca5|67849|cell division cycle associated 5	AK011701|Cdca5|67849|cell division cycle associated 5	BC052904|Cdca5|67849|cell division cycle associated 5	AK010540|Cdca5|67849|cell division cycle associated 5
mm9_v1_chr14_-_62301012_62301198	1.55886	BPTF.p2	AK080165|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK139063|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK134888|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK042416|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK084358|Dleu2|668253|deleted in lymphocytic leukemia, 2	AF380423|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK165901|Dleu2|668253|deleted in lymphocytic leukemia, 2
mm9_v1_chr8_+_109817355_109817761	1.55698	BPTF.p2	AK045123|Nfat5|54446|nuclear factor of activated T-cells 5	AK134022|Nfat5|54446|nuclear factor of activated T-cells 5	NM_018823|Nfat5|54446|nuclear factor of activated T-cells 5	NM_133957|Nfat5|54446|nuclear factor of activated T-cells 5	AK052632|Nfat5|54446|nuclear factor of activated T-cells 5	AF162853|Nfat5|54446|nuclear factor of activated T-cells 5	AK172011|Nfat5|54446|nuclear factor of activated T-cells 5	AF369980|Nfat5|54446|nuclear factor of activated T-cells 5	AF453571|Nfat5|54446|nuclear factor of activated T-cells 5
mm9_v1_chr14_-_20642973_20643066	1.55492	BPTF.p2	AK162433|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK148686|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK162070|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK160555|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012451|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC023932|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC096571|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012460|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK003732|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC048357|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012486|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	NM_026528|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK160696|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene
mm9_v1_chr7_+_25689359_25689364	1.55287	BPTF.p2	NM_001130152|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr13_+_23646900_23646904	1.5487	BPTF.p2	AK155411|Hist1h1d|14957|histone cluster 1, H1d	NM_145713|Hist1h1d|14957|histone cluster 1, H1d	AK054269|Hist1h1d|14957|histone cluster 1, H1d	BC117045|Hist1h1d|14957|histone cluster 1, H1d	BC119173|Hist1h1d|14957|histone cluster 1, H1d
mm9_v1_chr18_+_69843588_69843609	1.54637	BPTF.p2	AK017365|Tcf4|21413|transcription factor 4
mm9_v1_chr13_-_53024983_53025057	1.54545	BPTF.p2	BC026525|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK134886|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK019978|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003219|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003929|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK169661|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	BC049597|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	NM_016709|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK147855|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase
mm9_v1_chrX_+_71558358_71558460	1.54496	BPTF.p2	AK008402|Fam50a|108160|family with sequence similarity 50, member A	NM_138607|Fam50a|108160|family with sequence similarity 50, member A	Y18505|Fam50a|108160|family with sequence similarity 50, member A	BC125297|Fam50a|108160|family with sequence similarity 50, member A	BC026128|Fam50a|108160|family with sequence similarity 50, member A
mm9_v1_chr7_+_89003886_89004046	1.5425	BPTF.p2	AK083132|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK135100|Tm6sf1|107769|transmembrane 6 superfamily member 1	NM_145375|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK163621|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172109|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK046714|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172145|Tm6sf1|107769|transmembrane 6 superfamily member 1	BC023123|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK162572|Tm6sf1|107769|transmembrane 6 superfamily member 1
mm9_v1_chr6_-_48658182_48658205	1.54109	BPTF.p2	AK050328|Gimap6|231931|GTPase, IMAP family member 6	AK160244|Gimap6|231931|GTPase, IMAP family member 6	BC028779|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr14_-_73725576_73725603	1.53976	BPTF.p2	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr13_-_58228398_58228433	1.5391	BPTF.p2	AK172180|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr1_+_58052814_58052910	1.5383	BPTF.p2	AK042448|Sgol2|68549|shugoshin-like 2 (S. pombe)	NM_199007|Sgol2|68549|shugoshin-like 2 (S. pombe)	BC023855|Sgol2|68549|shugoshin-like 2 (S. pombe)	AK079371|Sgol2|68549|shugoshin-like 2 (S. pombe)	BC052742|Sgol2|68549|shugoshin-like 2 (S. pombe)	AK017868|Sgol2|68549|shugoshin-like 2 (S. pombe)
mm9_v1_chr13_+_54203236_54203344	1.53721	BPTF.p2	AK048238|Sfxn1|14057|sideroflexin 1
mm9_v1_chr1_-_184246785_184246786	1.53591	BPTF.p2	AK028774|Fbxo28|67948|F-box protein 28
mm9_v1_chr1_-_133176085_133176148	1.53549	BPTF.p2	AK149911|Ikbke|56489|inhibitor of kappaB kinase epsilon	AK088580|Ikbke|56489|inhibitor of kappaB kinase epsilon	AK153046|Ikbke|56489|inhibitor of kappaB kinase epsilon	NM_019777|Ikbke|56489|inhibitor of kappaB kinase epsilon
mm9_v1_chr7_+_134439804_134439861	1.53547	BPTF.p2	AK156251|Itgal|16408|integrin alpha L	AK172394|Itgal|16408|integrin alpha L	AK154115|Itgal|16408|integrin alpha L	AK169628|Itgal|16408|integrin alpha L	NM_008400|Itgal|16408|integrin alpha L
mm9_v1_chr7_+_73205419_73205451	1.53541	BPTF.p2	AK005256|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK151800|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK153502|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK152546|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK088438|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr9_-_78326946_78326968	1.5336	BPTF.p2	BC099609|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr9_-_99040505_99040647	1.5316	BPTF.p2	AK090116|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	BC039650|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	AK154106|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	NM_029094|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm9_v1_chr9_-_78327792_78327880	1.53147	BPTF.p2	BC040689|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK187140|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK206299|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK209036|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK213893|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK210348|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chrX_+_13209894_13209986	1.53076	BPTF.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr9_-_43013831_43013943	1.5306	BPTF.p2	Z18537|Pou2f3|18988|POU domain, class 2, transcription factor 3	L14677|Pou2f3|18988|POU domain, class 2, transcription factor 3	NM_011139|Pou2f3|18988|POU domain, class 2, transcription factor 3
mm9_v1_chr3_+_89006938_89006939	1.53035	BPTF.p2	M24119|Gba|14466|glucosidase, beta, acid
mm9_v1_chr10_+_93103936_93104198	1.5301	BPTF.p2	AF281278|Ntn4|57764|netrin 4	BC119182|Ntn4|57764|netrin 4	BC119184|Ntn4|57764|netrin 4	AF268066|Ntn4|57764|netrin 4
mm9_v1_chr17_+_45704145_45704512	1.52304	BPTF.p2	AK211181|Slc35b2|73836|solute carrier family 35, member B2	AK212100|Slc35b2|73836|solute carrier family 35, member B2	AK207266|Slc35b2|73836|solute carrier family 35, member B2	AK212091|Slc35b2|73836|solute carrier family 35, member B2	AK214463|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr13_-_40825789_40825811	1.52111	BPTF.p2	U17287|Tcfap2a|21418|transcription factor AP-2, alpha	AK053704|Tcfap2a|21418|transcription factor AP-2, alpha	NM_001122948|Tcfap2a|21418|transcription factor AP-2, alpha
mm9_v1_chr5_+_16078748_16078768	1.52085	BPTF.p2	AK164241|Hgf|15234|hepatocyte growth factor
mm9_v1_chr1_+_173847645_173847838	1.51937	BPTF.p2	AF248636|Slamf6|30925|SLAM family member 6	AF248635|Slamf6|30925|SLAM family member 6	NM_030710|Slamf6|30925|SLAM family member 6	BC030031|Slamf6|30925|SLAM family member 6	AB196808|Slamf6|30925|SLAM family member 6	AB196809|Slamf6|30925|SLAM family member 6	AB196810|Slamf6|30925|SLAM family member 6	AB196811|Slamf6|30925|SLAM family member 6	AB196836|Slamf6|30925|SLAM family member 6	EU591721|Slamf6|30925|SLAM family member 6
mm9_v1_chr8_+_86239131_86239208	1.51926	BPTF.p2	AK146294|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK145927|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK150997|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK172448|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK012002|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK016960|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK149475|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK151395|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK152394|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK137114|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	BC020134|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK164289|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK168079|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK167890|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr8_-_26951228_26951265	1.51133	BPTF.p2	AK087934|Ash2l|23808|ash2 (absent, small, or homeotic)-like (Drosophila)	AK146938|Ash2l|23808|ash2 (absent, small, or homeotic)-like (Drosophila)	BC012957|Ash2l|23808|ash2 (absent, small, or homeotic)-like (Drosophila)	AB020983|Ash2l|23808|ash2 (absent, small, or homeotic)-like (Drosophila)	AK132471|Ash2l|23808|ash2 (absent, small, or homeotic)-like (Drosophila)	NM_011791|Ash2l|23808|ash2 (absent, small, or homeotic)-like (Drosophila)
mm9_v1_chr10_+_92623587_92623703	1.51019	BPTF.p2	AK078325|Cdk17|237459|cyclin-dependent kinase 17	NM_146239|Cdk17|237459|cyclin-dependent kinase 17	BC064815|Cdk17|237459|cyclin-dependent kinase 17
mm9_v1_chr14_+_33599148_33599148	1.5097	BPTF.p2	AK007434|1810011H11Rik|69069|RIKEN cDNA 1810011H11 gene	NM_001163616|1810011H11Rik|69069|RIKEN cDNA 1810011H11 gene
mm9_v1_chr11_-_69509498_69509599	1.50472	BPTF.p2	AK170297|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK171014|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK044387|BC096441|619441|cDNA sequence BC096441	NM_001034097|BC096441|619441|cDNA sequence BC096441	NM_001159503|BC096441|619441|cDNA sequence BC096441	NM_011614|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12
mm9_v1_chr11_-_69495447_69495585	1.50267	BPTF.p2	NM_030702|Senp3|80886|SUMO/sentrin specific peptidase 3	AK088608|Senp3|80886|SUMO/sentrin specific peptidase 3	NM_001163571|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr17_-_27341189_27341265	1.502	BPTF.p2	AK082131|Lemd2|224640|LEM domain containing 2
mm9_v1_chr4_+_73888400_73888400	1.49743	BPTF.p2	BC042424|Kdm4c|76804|lysine (K)-specific demethylase 4C	NM_001172095|Kdm4c|76804|lysine (K)-specific demethylase 4C
mm9_v1_chr16_+_20128178_20128320	1.49623	BPTF.p2	AK004187|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chr9_-_54582260_54582334	1.49385	BPTF.p2	AK012342|Wdr61|66317|WD repeat domain 61	AK167706|Wdr61|66317|WD repeat domain 61	AK153862|Wdr61|66317|WD repeat domain 61	AK077037|Wdr61|66317|WD repeat domain 61	EF011623|Wdr61|66317|WD repeat domain 61	BC023026|Wdr61|66317|WD repeat domain 61	NM_001025375|Wdr61|66317|WD repeat domain 61	AK010283|Wdr61|66317|WD repeat domain 61	AF309554|Wdr61|66317|WD repeat domain 61	AK142498|Wdr61|66317|WD repeat domain 61	NM_001025376|Wdr61|66317|WD repeat domain 61	AK013114|Wdr61|66317|WD repeat domain 61	AK049527|Wdr61|66317|WD repeat domain 61	NM_023191|Wdr61|66317|WD repeat domain 61
mm9_v1_chr19_+_11518042_11518091	1.49131	BPTF.p2	AK088780|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK080934|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	NM_021718|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK039824|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK037569|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK138737|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK172495|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF230640|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF237913|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF354929|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	BC028433|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK088631|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B
mm9_v1_chr17_+_34734816_34734871	1.48846	BPTF.p2	L33412|Ager|11596|advanced glycosylation end product-specific receptor	AB207883|Ager|11596|advanced glycosylation end product-specific receptor	EU520325|Ager|11596|advanced glycosylation end product-specific receptor	EU570240|Ager|11596|advanced glycosylation end product-specific receptor	EU570241|Ager|11596|advanced glycosylation end product-specific receptor	EU570242|Ager|11596|advanced glycosylation end product-specific receptor	EU570243|Ager|11596|advanced glycosylation end product-specific receptor	EU570244|Ager|11596|advanced glycosylation end product-specific receptor	EU570245|Ager|11596|advanced glycosylation end product-specific receptor	EU570246|Ager|11596|advanced glycosylation end product-specific receptor	EU570247|Ager|11596|advanced glycosylation end product-specific receptor	EU906857|Ager|11596|advanced glycosylation end product-specific receptor	EU906858|Ager|11596|advanced glycosylation end product-specific receptor	EU906859|Ager|11596|advanced glycosylation end product-specific receptor	EU906860|Ager|11596|advanced glycosylation end product-specific receptor	EU906861|Ager|11596|advanced glycosylation end product-specific receptor	EU906862|Ager|11596|advanced glycosylation end product-specific receptor	EU906863|Ager|11596|advanced glycosylation end product-specific receptor	EU906864|Ager|11596|advanced glycosylation end product-specific receptor	EU906865|Ager|11596|advanced glycosylation end product-specific receptor
mm9_v1_chrX_-_35793335_35793510	1.48699	BPTF.p2	AK184164|Lamp2|16784|lysosomal-associated membrane protein 2	AK217258|Lamp2|16784|lysosomal-associated membrane protein 2	AK128946|Lamp2|16784|lysosomal-associated membrane protein 2
mm9_v1_chr11_+_68316520_68316601	1.48583	BPTF.p2	NM_001004435|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	NM_001081566|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK169948|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK036623|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	BC028998|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK171063|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK151178|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK153039|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6
mm9_v1_chr1_+_166053832_166053832	1.48532	BPTF.p2	BC109158|Selp|20344|selectin, platelet	BC109159|Selp|20344|selectin, platelet	M87861|Selp|20344|selectin, platelet	NM_011347|Selp|20344|selectin, platelet
mm9_v1_chr10_+_17775737_17775881	1.48482	BPTF.p2	NM_001111065|Reps1|19707|RalBP1 associated Eps domain containing protein	NM_009048|Reps1|19707|RalBP1 associated Eps domain containing protein	BC087547|Reps1|19707|RalBP1 associated Eps domain containing protein	AK150284|Reps1|19707|RalBP1 associated Eps domain containing protein	AK151309|Reps1|19707|RalBP1 associated Eps domain containing protein
mm9_v1_chr17_-_10512217_10512250	1.48291	BPTF.p2	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr5_-_65726802_65726885	1.48047	BPTF.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr14_-_56704033_56704109	1.47782	BPTF.p2	NM_008572|Mcpt8|17231|mast cell protease 8	X78545|Mcpt8|17231|mast cell protease 8	AK136485|Mcpt8|17231|mast cell protease 8	BC120607|Mcpt8|17231|mast cell protease 8	BC119342|Mcpt8|17231|mast cell protease 8	BC144934|Mcpt8|17231|mast cell protease 8
mm9_v1_chr12_+_81979727_81979876	1.47758	BPTF.p2	AK151009|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr18_-_78320126_78320164	1.47552	BPTF.p2	NM_001171010|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	NM_028122|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1
mm9_v1_chr10_-_43621485_43621487	1.47396	BPTF.p2	AK170225|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr2_+_38441497_38441644	1.47032	BPTF.p2	AK214670|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK208733|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr6_-_125141525_125141634	1.4703	BPTF.p2	BC029133|Ncapd2|68298|non-SMC condensin I complex, subunit D2	AK129068|Ncapd2|68298|non-SMC condensin I complex, subunit D2	BC026982|Ncapd2|68298|non-SMC condensin I complex, subunit D2	NM_146171|Ncapd2|68298|non-SMC condensin I complex, subunit D2	BC025460|Ncapd2|68298|non-SMC condensin I complex, subunit D2	AK156143|Ncapd2|68298|non-SMC condensin I complex, subunit D2
mm9_v1_chr10_-_33764102_33764118	1.46733	BPTF.p2	AK028763|Fam26d|270711|family with sequence similarity 26, member D	NM_001081165|Fam26d|270711|family with sequence similarity 26, member D
mm9_v1_chr2_-_72931338_72931457	1.46729	BPTF.p2	
mm9_v1_chr1_-_173579128_173579145	1.46674	BPTF.p2	AK040678|Slamf7|75345|SLAM family member 7	AK089525|Slamf7|75345|SLAM family member 7
mm9_v1_chr9_+_121628527_121628572	1.46556	BPTF.p2	BC048414|Nktr|18087|natural killer tumor recognition sequence	AK035582|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chrX_+_34335651_34335798	1.46392	BPTF.p2	BC004570|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	BC086756|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	U10404|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK188826|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK195999|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr2_-_129135707_129135713	1.46339	BPTF.p2	AK156449|Il1a|16175|interleukin 1 alpha	NM_010554|Il1a|16175|interleukin 1 alpha	X01450|Il1a|16175|interleukin 1 alpha
mm9_v1_chr13_+_113717661_113718000	1.46305	BPTF.p2	AK087450|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK042497|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK042066|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK162443|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC020331|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC057112|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK049530|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC037686|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC082319|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC050229|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_172594|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29
mm9_v1_chr5_+_33760994_33761117	1.4627	BPTF.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr19_+_55969810_55969810	1.45822	BPTF.p2	NM_001142924|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr4_-_86257921_86257973	1.4581	BPTF.p2	BC068237|Haus6|230376|HAUS augmin-like complex, subunit 6	NM_173400|Haus6|230376|HAUS augmin-like complex, subunit 6	AK040101|Haus6|230376|HAUS augmin-like complex, subunit 6	AK169222|Haus6|230376|HAUS augmin-like complex, subunit 6	AK077681|Haus6|230376|HAUS augmin-like complex, subunit 6	AK051016|Haus6|230376|HAUS augmin-like complex, subunit 6
mm9_v1_chr4_-_94269846_94269942	1.4573	BPTF.p2	BC139773|Plaa|18786|phospholipase A2, activating protein	AK075934|Plaa|18786|phospholipase A2, activating protein	BC139355|Plaa|18786|phospholipase A2, activating protein	BC139356|Plaa|18786|phospholipase A2, activating protein	NM_172695|Plaa|18786|phospholipase A2, activating protein	AK019070|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr2_+_84667196_84667249	1.45567	BPTF.p2	AF150090|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	BC031448|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	AK013546|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)
mm9_v1_chr15_-_76437917_76438021	1.45462	BPTF.p2	BC049941|Cpsf1|94230|cleavage and polyadenylation specific factor 1	AK155806|Cpsf1|94230|cleavage and polyadenylation specific factor 1	AK155648|Cpsf1|94230|cleavage and polyadenylation specific factor 1	AF322193|Cpsf1|94230|cleavage and polyadenylation specific factor 1	BC056388|Cpsf1|94230|cleavage and polyadenylation specific factor 1	NM_001164173|Cpsf1|94230|cleavage and polyadenylation specific factor 1	NM_053193|Cpsf1|94230|cleavage and polyadenylation specific factor 1
mm9_v1_chr1_-_39608739_39608803	1.45428	BPTF.p2	AK020327|Rnf149|67702|ring finger protein 149
mm9_v1_chr7_+_97574821_97574821	1.45076	BPTF.p2	NM_027298|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chrX_+_106392094_106392130	1.45054	BPTF.p2	NM_001037917|Gm6377|622976|predicted gene 6377	AK080287|Gm6377|622976|predicted gene 6377	AK138683|Gm6377|622976|predicted gene 6377	BC147431|Gm6377|622976|predicted gene 6377	BC147432|Gm6377|622976|predicted gene 6377
mm9_v1_chr4_-_131700278_131700485	1.44978	BPTF.p2	S66181|Oprd1|18386|opioid receptor, delta 1	L11064|Oprd1|18386|opioid receptor, delta 1	S65335|Oprd1|18386|opioid receptor, delta 1	BC137958|Oprd1|18386|opioid receptor, delta 1	BC137969|Oprd1|18386|opioid receptor, delta 1	L07271|Oprd1|18386|opioid receptor, delta 1	L06322|Oprd1|18386|opioid receptor, delta 1	AK043873|Oprd1|18386|opioid receptor, delta 1	NM_013622|Oprd1|18386|opioid receptor, delta 1
mm9_v1_chr6_-_88848650_88848773	1.44807	BPTF.p2	AF004105|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK129039|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK077801|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088378|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	BC055318|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK145176|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088156|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146187|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	D86725|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146375|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK037751|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	NM_008564|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
mm9_v1_chr18_+_4375607_4375646	1.44575	BPTF.p2	BC057643|Mtpap|67440|mitochondrial poly(A) polymerase	AK135537|Mtpap|67440|mitochondrial poly(A) polymerase
mm9_v1_chr4_+_144483110_144483188	1.44289	BPTF.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr7_+_73254341_73254400	1.44212	BPTF.p2	AK129255|Chsy1|269941|chondroitin sulfate synthase 1	BC128567|Chsy1|269941|chondroitin sulfate synthase 1	BC153826|Chsy1|269941|chondroitin sulfate synthase 1	BC153827|Chsy1|269941|chondroitin sulfate synthase 1	NM_001081163|Chsy1|269941|chondroitin sulfate synthase 1
mm9_v1_chr17_-_71876127_71876143	1.43968	BPTF.p2	AK132008|Ndc80|67052|NDC80 homolog, kinetochore complex component (S. cerevisiae)	AK163317|Ndc80|67052|NDC80 homolog, kinetochore complex component (S. cerevisiae)
mm9_v1_chr9_-_48288557_48288687	1.43922	BPTF.p2	AK178028|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK209299|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK212689|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK171619|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK150287|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	BC003445|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr8_-_98099096_98099096	1.43586	BPTF.p2	NM_027640|Prss54|70993|protease, serine, 54
mm9_v1_chr13_-_101603253_101603421	1.4346	BPTF.p2	AF461761|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	BC033452|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK090176|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK088004|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK051183|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	NM_022885|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5
mm9_v1_chr9_-_123771243_123771245	1.43382	BPTF.p2	AK089908|Xcr1|23832|chemokine (C motif) receptor 1	AK040878|Xcr1|23832|chemokine (C motif) receptor 1	NM_011798|Xcr1|23832|chemokine (C motif) receptor 1
mm9_v1_chr17_-_56256950_56256977	1.42971	BPTF.p2	BC024138|Plin5|66968|perilipin 5	DQ473305|Plin5|66968|perilipin 5	AK075872|Plin5|66968|perilipin 5	AK010202|Plin5|66968|perilipin 5	NM_025874|Plin5|66968|perilipin 5
mm9_v1_chr2_+_119456102_119456195	1.42966	BPTF.p2	BC009096|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr5_-_135870365_135870452	1.42654	BPTF.p2	AF516680|Pom121|107939|nuclear pore membrane protein 121	BC053101|Pom121|107939|nuclear pore membrane protein 121	AK154473|Pom121|107939|nuclear pore membrane protein 121	NM_148932|Pom121|107939|nuclear pore membrane protein 121
mm9_v1_chr4_-_19497166_19497254	1.42424	BPTF.p2	BC036983|Cpne3|70568|copine III	AK220348|Cpne3|70568|copine III	AK146324|Cpne3|70568|copine III	AK017357|Cpne3|70568|copine III	AK036664|Cpne3|70568|copine III	NM_027769|Cpne3|70568|copine III	AK017651|Cpne3|70568|copine III
mm9_v1_chr15_+_102126686_102126729	1.42378	BPTF.p2	BC082603|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	NM_001014976|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)
mm9_v1_chr5_+_64621640_64621693	1.42184	BPTF.p2	AK148356|Tbc1d1|57915|TBC1 domain family, member 1
mm9_v1_chr2_-_144096253_144096308	1.42139	BPTF.p2	AK007676|Snx5|69178|sorting nexin 5	AK029463|Snx5|69178|sorting nexin 5	NM_024225|Snx5|69178|sorting nexin 5
mm9_v1_chr10_-_80555271_80555374	1.42116	BPTF.p2	AK050186|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	AF392874|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	BC028820|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr19_+_4148636_4148721	1.41894	BPTF.p2	AK149639|Coro1b|23789|coronin, actin binding protein 1B	AF143956|Coro1b|23789|coronin, actin binding protein 1B	NM_011778|Coro1b|23789|coronin, actin binding protein 1B	BC029326|Coro1b|23789|coronin, actin binding protein 1B	BC131944|Coro1b|23789|coronin, actin binding protein 1B	BC132617|Coro1b|23789|coronin, actin binding protein 1B
mm9_v1_chr18_+_80403500_80403576	1.41519	BPTF.p2	AK010599|Txnl4a|27366|thioredoxin-like 4A	NM_001038608|Txnl4a|27366|thioredoxin-like 4A	NM_025299|Txnl4a|27366|thioredoxin-like 4A	AK148287|Txnl4a|27366|thioredoxin-like 4A	AK166497|Txnl4a|27366|thioredoxin-like 4A	BC029327|Txnl4a|27366|thioredoxin-like 4A	AK007331|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr10_-_93002655_93002708	1.41166	BPTF.p2	BC022626|Amdhd1|71761|amidohydrolase domain containing 1	BC055025|Amdhd1|71761|amidohydrolase domain containing 1	BC043681|Amdhd1|71761|amidohydrolase domain containing 1
mm9_v1_chr1_-_177909236_177909246	1.4116	BPTF.p2	BC132651|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	BC132653|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	AK139805|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	NM_001039518|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene
mm9_v1_chr8_+_73895369_73895482	1.40774	BPTF.p2	AK020528|Ocel1|77090|occludin/ELL domain containing 1
mm9_v1_chr15_+_81575277_81575277	1.40682	BPTF.p2	NM_001081016|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr7_+_75418724_75418724	1.40329	BPTF.p2	NM_001013811|Fam169b|434197|family with sequence similarity 169, member B
mm9_v1_chr7_+_107642724_107642796	1.40328	BPTF.p2	BC012967|Ucp2|22228|uncoupling protein 2 (mitochondrial, proton carrier)
mm9_v1_chr1_-_79758277_79758343	1.40257	BPTF.p2	AK220391|Wdfy1|69368|WD repeat and FYVE domain containing 1	AK157204|Wdfy1|69368|WD repeat and FYVE domain containing 1	AK005937|Wdfy1|69368|WD repeat and FYVE domain containing 1	AK159710|Wdfy1|69368|WD repeat and FYVE domain containing 1	AK165554|Wdfy1|69368|WD repeat and FYVE domain containing 1	AK007215|Wdfy1|69368|WD repeat and FYVE domain containing 1	NM_001111279|Wdfy1|69368|WD repeat and FYVE domain containing 1	NM_027057|Wdfy1|69368|WD repeat and FYVE domain containing 1
mm9_v1_chr7_-_117987922_117987942	1.39528	BPTF.p2	AK006791|Rnf141|67150|ring finger protein 141
mm9_v1_chr1_+_123327625_123327651	1.39449	BPTF.p2	AK142302|Ccdc93|70829|coiled-coil domain containing 93	NM_001025156|Ccdc93|70829|coiled-coil domain containing 93	NM_029955|Ccdc93|70829|coiled-coil domain containing 93	AK082581|Ccdc93|70829|coiled-coil domain containing 93
mm9_v1_chr7_+_53138934_53138972	1.39423	BPTF.p2	
mm9_v1_chr2_+_181287207_181287250	1.3931	BPTF.p2	AK135001|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5
mm9_v1_chr18_-_10610261_10610307	1.39291	BPTF.p2	BC151069|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC151077|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC172153|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm9_v1_chr4_+_143002328_143002328	1.39269	BPTF.p2	AK029142|Pramef8|242736|PRAME family member 8	NM_172877|Pramef8|242736|PRAME family member 8
mm9_v1_chr2_+_24831548_24831624	1.39205	BPTF.p2	NM_146251|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK148380|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK088362|Pnpla7|241274|patatin-like phospholipase domain containing 7	AK170417|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC021312|Pnpla7|241274|patatin-like phospholipase domain containing 7
mm9_v1_chr4_+_45887082_45887099	1.39037	BPTF.p2	AK173193|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene
mm9_v1_chr6_+_31348811_31348859	1.38905	BPTF.p2	AK037967|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	NM_013791|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK165239|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK077541|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK164822|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	BC013703|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK171980|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	U72194|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK155457|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs
mm9_v1_chr19_-_36700493_36700513	1.38709	BPTF.p2	AK149600|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene	AK149390|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene
mm9_v1_chr10_-_117261663_117261731	1.38633	BPTF.p2	M79314|Rap1b|215449|RAS related protein 1b	BC147700|Rap1b|215449|RAS related protein 1b	BC147713|Rap1b|215449|RAS related protein 1b
mm9_v1_chr19_-_8848911_8848977	1.38177	BPTF.p2	BC061068|Tmem179b|67706|transmembrane protein 179B	AK007906|Tmem179b|67706|transmembrane protein 179B	AK002731|Tmem179b|67706|transmembrane protein 179B	AK010996|Tmem179b|67706|transmembrane protein 179B	BC087914|Tmem179b|67706|transmembrane protein 179B	AK005135|Tmem179b|67706|transmembrane protein 179B	BC116961|Tmem179b|67706|transmembrane protein 179B	BC116963|Tmem179b|67706|transmembrane protein 179B	BC144813|Tmem179b|67706|transmembrane protein 179B	NM_026325|Tmem179b|67706|transmembrane protein 179B
mm9_v1_chr2_-_163462584_163462669	1.3804	BPTF.p2	AK128955|Serinc3|26943|serine incorporator 3
mm9_v1_chrX_+_35954355_35954475	1.3799	BPTF.p2	AK138385|Mcts1|68995|malignant T cell amplified sequence 1	BC037103|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr2_+_119034455_119034455	1.37867	BPTF.p2	NM_001164827|Zfyve19|72008|zinc finger, FYVE domain containing 19	NM_028054|Zfyve19|72008|zinc finger, FYVE domain containing 19
mm9_v1_chr7_+_97357406_97357492	1.37744	BPTF.p2	AK163129|Picalm|233489|phosphatidylinositol binding clathrin assembly protein
mm9_v1_chrX_-_103680566_103680612	1.37711	BPTF.p2	BC085176|Fndc3c1|333564|fibronectin type III domain containing 3C1	BC076625|Fndc3c1|333564|fibronectin type III domain containing 3C1	NM_001007580|Fndc3c1|333564|fibronectin type III domain containing 3C1	DQ192038|Fndc3c1|333564|fibronectin type III domain containing 3C1
mm9_v1_chr11_-_43239482_43239482	1.37607	BPTF.p2	AF069051|Pttg1|30939|pituitary tumor-transforming gene 1	AF071209|Pttg1|30939|pituitary tumor-transforming gene 1	NM_013917|Pttg1|30939|pituitary tumor-transforming gene 1
mm9_v1_chr2_+_80478960_80478972	1.3727	BPTF.p2	NM_027091|Nup35|69482|nucleoporin 35	AK089997|Nup35|69482|nucleoporin 35
mm9_v1_chr10_+_7445867_7445883	1.37145	BPTF.p2	BC009136|Katna1|23924|katanin p60 (ATPase-containing) subunit A1
mm9_v1_chr8_+_127316918_127316991	1.37013	BPTF.p2	AK051455|Trim67|330863|tripartite motif-containing 67	NM_198632|Trim67|330863|tripartite motif-containing 67	BC094596|Trim67|330863|tripartite motif-containing 67
mm9_v1_chr18_-_78320014_78320074	1.36916	BPTF.p2	AK012066|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AJ420967|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC058594|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC100570|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	BC086673|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1	AK153891|Slc14a1|108052|solute carrier family 14 (urea transporter), member 1
mm9_v1_chr3_-_132897852_132897912	1.36749	BPTF.p2	BC049886|Arhgef38|77669|ho guanine nucleotide exchange factor (GEF) 38	NM_029953|Arhgef38|77669|ho guanine nucleotide exchange factor (GEF) 38	AK020284|Arhgef38|77669|ho guanine nucleotide exchange factor (GEF) 38
mm9_v1_chr10_+_97069816_97069972	1.36689	BPTF.p2	AK086197|Kera|16545|keratocan	NM_008438|Kera|16545|keratocan	AF022256|Kera|16545|keratocan	BC114980|Kera|16545|keratocan
mm9_v1_chr2_-_144096164_144096250	1.36245	BPTF.p2	AK159904|Snx5|69178|sorting nexin 5	AK167362|Snx5|69178|sorting nexin 5
mm9_v1_chr19_-_40662819_40662952	1.36105	BPTF.p2	BC037699|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK166459|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK166494|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AF056573|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AF056574|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK159610|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK147711|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK153946|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK168905|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK151072|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	AK134148|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	NM_019698|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1	NM_153554|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1
mm9_v1_chr7_+_19967358_19967392	1.36051	BPTF.p2	AK141692|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082323|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK145969|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082761|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	NM_007949|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	BC034517|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2
mm9_v1_chr2_+_121781736_121781881	1.3569	BPTF.p2	AK163262|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK082646|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr16_-_55838747_55838771	1.35604	BPTF.p2	AK149946|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	NM_001159395|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	NM_030612|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AB047549|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chr17_+_29089401_29089472	1.35545	BPTF.p2	AK171742|Kctd20|66989|potassium channel tetramerisation domain containing 20	BC052712|Kctd20|66989|potassium channel tetramerisation domain containing 20	BC048161|Kctd20|66989|potassium channel tetramerisation domain containing 20	AK010404|Kctd20|66989|potassium channel tetramerisation domain containing 20
mm9_v1_chr6_-_142421466_142421628	1.35194	BPTF.p2	BC021322|Gys2|232493|glycogen synthase 2	BC158081|Gys2|232493|glycogen synthase 2	NM_145572|Gys2|232493|glycogen synthase 2
mm9_v1_chr1_-_173579057_173579105	1.35151	BPTF.p2	AB196816|Slamf7|75345|SLAM family member 7	AB196817|Slamf7|75345|SLAM family member 7	AB196818|Slamf7|75345|SLAM family member 7	AB196819|Slamf7|75345|SLAM family member 7	AB196837|Slamf7|75345|SLAM family member 7	AF467909|Slamf7|75345|SLAM family member 7	AF467910|Slamf7|75345|SLAM family member 7	AF467911|Slamf7|75345|SLAM family member 7	BC011154|Slamf7|75345|SLAM family member 7	AK172665|Slamf7|75345|SLAM family member 7
mm9_v1_chr17_+_36016712_36016724	1.34942	BPTF.p2	NM_026987|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm9_v1_chr5_+_53946944_53947017	1.34883	BPTF.p2	AY512934|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	NM_001080928|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region
mm9_v1_chr1_+_174628164_174628196	1.34786	BPTF.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chrX_+_162608411_162608448	1.34777	BPTF.p2	AK045118|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK160583|Gemin8|237221|gem (nuclear organelle) associated protein 8	NM_146238|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK085045|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK037580|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK047511|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK053774|Gemin8|237221|gem (nuclear organelle) associated protein 8
mm9_v1_chr13_+_27186058_27186083	1.34707	BPTF.p2	AK082929|Prl3d1|18775|prolactin family 3, subfamily d, member 1	NM_008864|Prl3d1|18775|prolactin family 3, subfamily d, member 1	BC064736|Prl3d1|18775|prolactin family 3, subfamily d, member 1	M35662|Prl3d1|18775|prolactin family 3, subfamily d, member 1	AF525162|Prl3d1|18775|prolactin family 3, subfamily d, member 1
mm9_v1_chr9_-_14916551_14916551	1.34616	BPTF.p2	AK132457|Hephl1|244698|hephaestin-like 1	NM_001164797|Hephl1|244698|hephaestin-like 1
mm9_v1_chr18_-_10610315_10610349	1.34574	BPTF.p2	AK145333|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	NM_001081222|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm9_v1_chr13_-_97440734_97440890	1.34464	BPTF.p2	AK159899|Hmgcr|15357|3-hydroxy-3-methylglutaryl-Coenzyme A reductase	BC085083|Hmgcr|15357|3-hydroxy-3-methylglutaryl-Coenzyme A reductase	AK048784|Hmgcr|15357|3-hydroxy-3-methylglutaryl-Coenzyme A reductase	NM_008255|Hmgcr|15357|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm9_v1_chr7_+_104629465_104629553	1.34292	BPTF.p2	NM_027256|Ints4|101861|integrator complex subunit 4	AK163383|Ints4|101861|integrator complex subunit 4	AK088635|Ints4|101861|integrator complex subunit 4	BC013710|Ints4|101861|integrator complex subunit 4
mm9_v1_chr17_-_6943173_6943193	1.34247	BPTF.p2	AK207973|Ezr|22350|ezrin	AK207113|Ezr|22350|ezrin
mm9_v1_chr13_-_64599099_64599099	1.34073	BPTF.p2	AK004471|1190003K10Rik|68880|RIKEN cDNA 1190003K10 gene	NM_001195435|1190003K10Rik|68880|RIKEN cDNA 1190003K10 gene
mm9_v1_chr5_-_25211581_25211614	1.34069	BPTF.p2	AK085093|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	AK020192|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	Y17040|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	BC033417|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	NM_020570|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2
mm9_v1_chr5_+_144119016_144119016	1.33933	BPTF.p2	DQ193535|Grid2ip|170935|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1	NM_001159321|Grid2ip|170935|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1
mm9_v1_chr3_+_30543428_30543428	1.3388	BPTF.p2	AK019775|Lrriq4|68307|leucine-rich repeats and IQ motif containing 4	NM_026668|Lrriq4|68307|leucine-rich repeats and IQ motif containing 4
mm9_v1_chr8_+_74474946_74475007	1.33768	BPTF.p2	AK158413|Zfp961|234413|zinc finger protein 961	NM_001164581|Zfp961|234413|zinc finger protein 961	BC065788|Zfp961|234413|zinc finger protein 961	AK020714|Zfp961|234413|zinc finger protein 961	BC049349|Zfp961|234413|zinc finger protein 961
mm9_v1_chr14_+_47896669_47896817	1.33767	BPTF.p2	BC057159|Socs4|67296|suppressor of cytokine signaling 4	AK014115|Socs4|67296|suppressor of cytokine signaling 4	NM_080843|Socs4|67296|suppressor of cytokine signaling 4
mm9_v1_chr19_+_60832080_60832311	1.33745	BPTF.p2	AK139148|Nanos1|332397|nanos homolog 1 (Drosophila)	BC056473|Nanos1|332397|nanos homolog 1 (Drosophila)	AK046189|Nanos1|332397|nanos homolog 1 (Drosophila)	AB095029|Nanos1|332397|nanos homolog 1 (Drosophila)
mm9_v1_chr17_+_6910178_6910178	1.33719	BPTF.p2	NM_183368|Sytl3|83672|synaptotagmin-like 3
mm9_v1_chr15_+_76210904_76210993	1.33345	BPTF.p2	AK036810|Heatr7a|223658|HEAT repeat containing 7A	NM_175457|Heatr7a|223658|HEAT repeat containing 7A	AK170702|Heatr7a|223658|HEAT repeat containing 7A	AK090131|Heatr7a|223658|HEAT repeat containing 7A	AK147808|Heatr7a|223658|HEAT repeat containing 7A	AK147897|Heatr7a|223658|HEAT repeat containing 7A	AK038863|Heatr7a|223658|HEAT repeat containing 7A	AK052153|Heatr7a|223658|HEAT repeat containing 7A
mm9_v1_chr17_-_32967155_32967192	1.3334	BPTF.p2	BC096552|Zfp799|240064|zinc finger protein 799	BC062813|Zfp799|240064|zinc finger protein 799	AK083640|Zfp799|240064|zinc finger protein 799	AK137037|Zfp799|240064|zinc finger protein 799	AK031686|Zfp799|240064|zinc finger protein 799	NM_177359|Zfp799|240064|zinc finger protein 799
mm9_v1_chr3_-_105604199_105604320	1.32609	BPTF.p2	AK152504|Rap1a|109905|RAS-related protein-1a	AK030897|Rap1a|109905|RAS-related protein-1a	BC051419|Rap1a|109905|RAS-related protein-1a	NM_145541|Rap1a|109905|RAS-related protein-1a
mm9_v1_chrX_-_34442878_34442893	1.32421	BPTF.p2	AK042690|Nkrf|77286|NF-kappaB repressing factor	NM_029891|Nkrf|77286|NF-kappaB repressing factor
mm9_v1_chr15_+_37163001_37163168	1.32328	BPTF.p2	BC055035|Grhl2|252973|grainyhead-like 2 (Drosophila)	AF411213|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr3_+_96962693_96962789	1.32285	BPTF.p2	AK165356|Acp6|66659|acid phosphatase 6, lysophosphatidic	NM_019800|Acp6|66659|acid phosphatase 6, lysophosphatidic	AB030038|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK077729|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK160271|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK002783|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK171757|Acp6|66659|acid phosphatase 6, lysophosphatidic
mm9_v1_chr3_+_66789621_66789657	1.32257	BPTF.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr5_-_136611846_136611947	1.3211	BPTF.p2	AK004717|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK154352|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK051910|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK167020|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK172708|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK153976|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	BC048397|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK042370|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK084948|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	NM_027891|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1
mm9_v1_chr10_+_42547705_42547741	1.31915	BPTF.p2	AK180295|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr18_+_66618186_66618270	1.31636	BPTF.p2	AK143990|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AK169914|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AK043856|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AK088556|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	AB041230|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	NM_021451|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1	BC050821|Pmaip1|58801|phorbol-12-myristate-13-acetate-induced protein 1
mm9_v1_chr1_-_181733742_181733841	1.31556	BPTF.p2	BC138343|Ahctf1|226747|AT hook containing transcription factor 1	BC138344|Ahctf1|226747|AT hook containing transcription factor 1	AB059278|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr10_-_33671000_33671074	1.3122	BPTF.p2	AK052071|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK160928|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK046191|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK164710|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	NM_028287|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK012263|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	BC089514|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK077730|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK164346|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK077304|Zufsp|72580|zinc finger with UFM1-specific peptidase domain	AK172184|Zufsp|72580|zinc finger with UFM1-specific peptidase domain
mm9_v1_chr13_+_54201964_54202052	1.3114	BPTF.p2	AK084725|Sfxn1|14057|sideroflexin 1	AK140048|Sfxn1|14057|sideroflexin 1
mm9_v1_chr19_-_34601874_34601967	1.30447	BPTF.p2	AK154804|Lipa|16889|lysosomal acid lipase A	BC058564|Lipa|16889|lysosomal acid lipase A	AK088659|Lipa|16889|lysosomal acid lipase A	AK149791|Lipa|16889|lysosomal acid lipase A	AK169567|Lipa|16889|lysosomal acid lipase A	AK153624|Lipa|16889|lysosomal acid lipase A	AK083099|Lipa|16889|lysosomal acid lipase A	AK164007|Lipa|16889|lysosomal acid lipase A	NM_001111100|Lipa|16889|lysosomal acid lipase A	NM_021460|Lipa|16889|lysosomal acid lipase A
mm9_v1_chr12_+_112692786_112692860	1.30298	BPTF.p2	
mm9_v1_chr17_+_34734773_34734813	1.2982	BPTF.p2	AK004802|Ager|11596|advanced glycosylation end product-specific receptor	BC061182|Ager|11596|advanced glycosylation end product-specific receptor	NM_007425|Ager|11596|advanced glycosylation end product-specific receptor
mm9_v1_chr11_-_86171026_86171057	1.29751	BPTF.p2	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr5_+_115373246_115373254	1.29677	BPTF.p2	AK078690|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	NM_145209|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr8_+_13037307_13037405	1.29674	BPTF.p2	AK154100|F10|14058|coagulation factor X	NM_007972|F10|14058|coagulation factor X	AK171096|F10|14058|coagulation factor X	BC050219|F10|14058|coagulation factor X	BC003877|F10|14058|coagulation factor X	AK154572|F10|14058|coagulation factor X	AK170282|F10|14058|coagulation factor X
mm9_v1_chr19_+_55255374_55255445	1.29416	BPTF.p2	NM_009348|Tectb|21684|tectorin beta	X99806|Tectb|21684|tectorin beta	BC138888|Tectb|21684|tectorin beta	BC138889|Tectb|21684|tectorin beta
mm9_v1_chr4_-_48486214_48486324	1.29415	BPTF.p2	AK011904|Tex10|269536|testis expressed gene 10	BC151176|Tex10|269536|testis expressed gene 10	BC151177|Tex10|269536|testis expressed gene 10	AK132870|Tex10|269536|testis expressed gene 10	NM_172304|Tex10|269536|testis expressed gene 10	AK013375|Tex10|269536|testis expressed gene 10	AK141288|Tex10|269536|testis expressed gene 10
mm9_v1_chr9_+_107483603_107483637	1.29411	BPTF.p2	BC018457|Hyal3|109685|hyaluronoglucosaminidase 3	NM_178020|Hyal3|109685|hyaluronoglucosaminidase 3	AY048681|Hyal3|109685|hyaluronoglucosaminidase 3
mm9_v1_chrX_+_104115963_104116162	1.29354	BPTF.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr2_+_122573644_122573786	1.2931	BPTF.p2	
mm9_v1_chr16_+_18498805_18498912	1.29201	BPTF.p2	AK087954|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	NM_001081682|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK016952|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK171253|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AF301595|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr1_+_133049757_133049907	1.29031	BPTF.p2	AK170252|Eif2d|16865|eukaryotic translation initiation factor 2D	AK082748|Eif2d|16865|eukaryotic translation initiation factor 2D	AK030312|Eif2d|16865|eukaryotic translation initiation factor 2D	AK046539|Eif2d|16865|eukaryotic translation initiation factor 2D	AK166085|Eif2d|16865|eukaryotic translation initiation factor 2D	AK170448|Eif2d|16865|eukaryotic translation initiation factor 2D	AK139052|Eif2d|16865|eukaryotic translation initiation factor 2D	NM_001136070|Eif2d|16865|eukaryotic translation initiation factor 2D	NM_010709|Eif2d|16865|eukaryotic translation initiation factor 2D	AK078472|Eif2d|16865|eukaryotic translation initiation factor 2D	BC023709|Eif2d|16865|eukaryotic translation initiation factor 2D	AK036154|Eif2d|16865|eukaryotic translation initiation factor 2D	AK047005|Eif2d|16865|eukaryotic translation initiation factor 2D	AK167980|Eif2d|16865|eukaryotic translation initiation factor 2D	AK161269|Eif2d|16865|eukaryotic translation initiation factor 2D	AK171115|Eif2d|16865|eukaryotic translation initiation factor 2D	AK034115|Eif2d|16865|eukaryotic translation initiation factor 2D	AK168120|Eif2d|16865|eukaryotic translation initiation factor 2D	AK083638|Eif2d|16865|eukaryotic translation initiation factor 2D	BC025036|Eif2d|16865|eukaryotic translation initiation factor 2D	AK193013|Eif2d|16865|eukaryotic translation initiation factor 2D	U58337|Eif2d|16865|eukaryotic translation initiation factor 2D
mm9_v1_chr11_-_51670897_51671154	1.28934	BPTF.p2	AK147453|Phf15|76901|PHD finger protein 15	AK129097|Phf15|76901|PHD finger protein 15	NM_199299|Phf15|76901|PHD finger protein 15	AK004823|Phf15|76901|PHD finger protein 15
mm9_v1_chr13_+_24506990_24507004	1.28843	BPTF.p2	AK166486|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AK145199|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	NM_007717|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	BC055079|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase
mm9_v1_chr9_+_35367050_35367089	1.28839	BPTF.p2	AK019213|Pus3|67049|pseudouridine synthase 3	AK079095|Pus3|67049|pseudouridine synthase 3	NM_023292|Pus3|67049|pseudouridine synthase 3	AK017552|Pus3|67049|pseudouridine synthase 3	BC029253|Pus3|67049|pseudouridine synthase 3
mm9_v1_chr10_+_110929965_110929972	1.28472	BPTF.p2	AK216281|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr9_-_97270363_97270376	1.28436	BPTF.p2	BC111825|Trim42|78911|tripartite motif-containing 42	AK019654|Trim42|78911|tripartite motif-containing 42	NM_030219|Trim42|78911|tripartite motif-containing 42
mm9_v1_chr12_-_80084464_80084464	1.28128	BPTF.p2	BC057677|Tmem229b|268567|transmembrane protein 229B	NM_001170401|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chr1_-_135557934_135557977	1.27718	BPTF.p2	AK148376|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK078105|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK145740|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK167700|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK041148|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK017663|Zc3h11a|70579|zinc finger CCCH type containing 11A	AK035705|Zbed6|667118|zinc finger, BED domain containing 6	NM_144530|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chr7_+_52409672_52409737	1.27631	BPTF.p2	AK004341|Pih1d1|68845|PIH1 domain containing 1	AK152695|Pih1d1|68845|PIH1 domain containing 1	AK089003|Pih1d1|68845|PIH1 domain containing 1	AK146039|Pih1d1|68845|PIH1 domain containing 1
mm9_v1_chr4_+_154256366_154256404	1.27305	BPTF.p2	AK154366|Mmel1|27390|membrane metallo-endopeptidase-like 1
mm9_v1_chr3_-_88717730_88717876	1.27002	BPTF.p2	AK163280|Msto1|229524|misato homolog 1 (Drosophila)	BC108354|Msto1|229524|misato homolog 1 (Drosophila)	AK167586|Msto1|229524|misato homolog 1 (Drosophila)	BC008103|Msto1|229524|misato homolog 1 (Drosophila)	AK166834|Msto1|229524|misato homolog 1 (Drosophila)	AK166236|Msto1|229524|misato homolog 1 (Drosophila)	AK170160|Msto1|229524|misato homolog 1 (Drosophila)	AK139708|Msto1|229524|misato homolog 1 (Drosophila)	NM_144898|Msto1|229524|misato homolog 1 (Drosophila)
mm9_v1_chr13_+_21903614_21903659	1.2672	BPTF.p2	NM_001195421|Hist1h4m|100041230|histone cluster 1, H4m	BC115448|Hist1h4n|319161|histone cluster 1, H4n	BC152397|Hist1h4n|319161|histone cluster 1, H4n	NM_175657|Hist1h4n|319161|histone cluster 1, H4n	BC115446|Hist1h4f|319157|histone cluster 1, H4f
mm9_v1_chr3_-_88214215_88214225	1.2671	BPTF.p2	BC034333|Pmf1|67037|polyamine-modulated factor 1
mm9_v1_chr12_-_88784769_88784966	1.26653	BPTF.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr9_-_113563906_113564041	1.26574	BPTF.p2	AK199870|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr1_+_58770105_58770160	1.26572	BPTF.p2	NM_009805|Cflar|12633|CASP8 and FADD-like apoptosis regulator	NM_207653|Cflar|12633|CASP8 and FADD-like apoptosis regulator	AK143812|Cflar|12633|CASP8 and FADD-like apoptosis regulator	AK161220|Cflar|12633|CASP8 and FADD-like apoptosis regulator	BC029223|Cflar|12633|CASP8 and FADD-like apoptosis regulator
mm9_v1_chr16_+_27388907_27389196	1.26486	BPTF.p2	BC144895|Ccdc50|67501|coiled-coil domain containing 50	BC144898|Ccdc50|67501|coiled-coil domain containing 50	BC145933|Ccdc50|67501|coiled-coil domain containing 50	BC145935|Ccdc50|67501|coiled-coil domain containing 50	NM_001025615|Ccdc50|67501|coiled-coil domain containing 50	NM_026202|Ccdc50|67501|coiled-coil domain containing 50	AK162434|Ccdc50|67501|coiled-coil domain containing 50	AK016827|Ccdc50|67501|coiled-coil domain containing 50	AK151672|Ccdc50|67501|coiled-coil domain containing 50	AK147820|Ccdc50|67501|coiled-coil domain containing 50	AK077557|Ccdc50|67501|coiled-coil domain containing 50	AK165214|Ccdc50|67501|coiled-coil domain containing 50	AK012190|Ccdc50|67501|coiled-coil domain containing 50	AJ534985|Ccdc50|67501|coiled-coil domain containing 50
mm9_v1_chr9_+_99476204_99476272	1.26484	BPTF.p2	AK050090|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	NM_031403|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	BC006661|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	AK139631|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)	AK090351|Dbr1|83703|debranching enzyme homolog 1 (S. cerevisiae)
mm9_v1_chr10_-_41905549_41905563	1.26357	BPTF.p2	AK041595|Foxo3|56484|forkhead box O3	AK159465|Foxo3|56484|forkhead box O3
mm9_v1_chrX_-_39265047_39265129	1.26308	BPTF.p2	AK140950|Thoc2|331401|THO complex 2	AK138023|Thoc2|331401|THO complex 2	NM_001033422|Thoc2|331401|THO complex 2	AK137966|Thoc2|331401|THO complex 2
mm9_v1_chr10_+_79217820_79217863	1.25863	BPTF.p2	BC119135|Fgf22|67112|fibroblast growth factor 22	AK008922|Fgf22|67112|fibroblast growth factor 22	AK010054|Fgf22|67112|fibroblast growth factor 22	AB036765|Fgf22|67112|fibroblast growth factor 22	NM_023304|Fgf22|67112|fibroblast growth factor 22
mm9_v1_chr5_+_137429121_137429188	1.25813	BPTF.p2	NM_001163243|Fis1|66437|fission 1 (mitochondrial outer membrane) homolog (yeast)
mm9_v1_chr13_-_56279929_56280053	1.25748	BPTF.p2	BC005528|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	AK153654|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	BC031130|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	AK170349|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B
mm9_v1_chr5_-_123237776_123238028	1.25717	BPTF.p2	
mm9_v1_chr13_+_38129095_38129163	1.25525	BPTF.p2	AK152707|Riok1|71340|RIO kinase 1 (yeast)	BC006884|Riok1|71340|RIO kinase 1 (yeast)	AK017312|Riok1|71340|RIO kinase 1 (yeast)	NM_024242|Riok1|71340|RIO kinase 1 (yeast)
mm9_v1_chr11_-_107050573_107050694	1.25471	BPTF.p2	BC024874|Nol11|68979|nucleolar protein 11	AK005123|Nol11|68979|nucleolar protein 11	AK038696|Nol11|68979|nucleolar protein 11	AK078524|Nol11|68979|nucleolar protein 11	AK157743|Nol11|68979|nucleolar protein 11	AK076704|Nol11|68979|nucleolar protein 11	NM_001161329|Nol11|68979|nucleolar protein 11	NM_133702|Nol11|68979|nucleolar protein 11
mm9_v1_chr4_-_126540249_126540348	1.25288	BPTF.p2	AK018207|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr19_+_41904459_41904605	1.25134	BPTF.p2	NM_008043|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	AK015680|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	BC140987|Frat1|14296|frequently rearranged in advanced T-cell lymphomas	U58974|Frat1|14296|frequently rearranged in advanced T-cell lymphomas
mm9_v1_chr1_-_79758246_79758257	1.25121	BPTF.p2	BC025226|Wdfy1|69368|WD repeat and FYVE domain containing 1
mm9_v1_chr19_+_41557475_41557518	1.24962	BPTF.p2	AK041621|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr3_+_51465095_51465114	1.24926	BPTF.p2	NM_174995|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr18_-_21810868_21810868	1.24862	BPTF.p2	NM_001081403|Klhl14|225266|kelch-like 14 (Drosophila)
mm9_v1_chr18_-_33623287_33623340	1.24702	BPTF.p2	NM_053078|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr10_-_62342761_62342761	1.24659	BPTF.p2	GU079948|Tet1|52463|tet oncogene 1	NM_027384|Tet1|52463|tet oncogene 1
mm9_v1_chr12_-_71203819_71203840	1.24643	BPTF.p2	AY515727|Nin|18080|ninein	NM_001081453|Nin|18080|ninein
mm9_v1_chr2_+_90517371_90517371	1.24626	BPTF.p2	AF104415|Nup160|59015|nucleoporin 160	NM_021512|Nup160|59015|nucleoporin 160
mm9_v1_chr11_-_5607667_5607715	1.24613	BPTF.p2	BC029262|Mrps24|64660|mitochondrial ribosomal protein S24	AK010590|Mrps24|64660|mitochondrial ribosomal protein S24	AK003117|Mrps24|64660|mitochondrial ribosomal protein S24	AK007338|Mrps24|64660|mitochondrial ribosomal protein S24	AK014099|Mrps24|64660|mitochondrial ribosomal protein S24	AK012461|Mrps24|64660|mitochondrial ribosomal protein S24	NM_026080|Mrps24|64660|mitochondrial ribosomal protein S24
mm9_v1_chrX_-_161418209_161418270	1.24506	BPTF.p2	AK010480|Mospd2|76763|motile sperm domain containing 2	AK031405|Mospd2|76763|motile sperm domain containing 2	BC026425|Mospd2|76763|motile sperm domain containing 2	AK156572|Mospd2|76763|motile sperm domain containing 2	AK039893|Mospd2|76763|motile sperm domain containing 2	AK135188|Mospd2|76763|motile sperm domain containing 2	AK035985|Mospd2|76763|motile sperm domain containing 2	NM_029730|Mospd2|76763|motile sperm domain containing 2
mm9_v1_chr7_-_132634942_132634979	1.24462	BPTF.p2	AK009715|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK166410|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK160217|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK011011|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr12_+_53800302_53800317	1.24358	BPTF.p2	DQ233645|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr8_+_74120004_74120094	1.24209	BPTF.p2	
mm9_v1_chr1_-_166865638_166865652	1.24146	BPTF.p2	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr4_-_143802891_143802919	1.23988	BPTF.p2	BC094895|C87977|97187|expressed sequence C87977	AK139502|C87977|97187|expressed sequence C87977	NM_001177542|C87977|97187|expressed sequence C87977
mm9_v1_chrX_+_10062237_10062294	1.2386	BPTF.p2	NM_019634|Tspan7|21912|tetraspanin 7	AK195558|Tspan7|21912|tetraspanin 7	AK147306|Tspan7|21912|tetraspanin 7	AK147404|Tspan7|21912|tetraspanin 7	AK004776|Tspan7|21912|tetraspanin 7	BC058603|Tspan7|21912|tetraspanin 7	AF052492|Tspan7|21912|tetraspanin 7	BC050153|Tspan7|21912|tetraspanin 7	D26483|Tspan7|21912|tetraspanin 7
mm9_v1_chr11_+_11586273_11586432	1.23829	BPTF.p2	BC138789|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr6_-_55631039_55631067	1.23558	BPTF.p2	AK144303|Neurod6|11922|neurogenic differentiation 6	BC087831|Neurod6|11922|neurogenic differentiation 6	U29086|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr2_-_69551514_69551609	1.23231	BPTF.p2	AK030411|Fastkd1|320720|FAST kinase domains 1	AK083186|Fastkd1|320720|FAST kinase domains 1
mm9_v1_chr1_-_196957466_196957592	1.23113	BPTF.p2	M23446|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC092048|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC028945|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK134226|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr2_+_121332458_121332519	1.22983	BPTF.p2	NM_030234|Wdr76|241627|WD repeat domain 76	AK051037|Wdr76|241627|WD repeat domain 76	AK020004|Wdr76|241627|WD repeat domain 76	AK162181|Wdr76|241627|WD repeat domain 76	AK031592|Wdr76|241627|WD repeat domain 76	BC117821|Wdr76|241627|WD repeat domain 76	BC117822|Wdr76|241627|WD repeat domain 76
mm9_v1_chr19_-_44210311_44210378	1.22905	BPTF.p2	BC037640|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	BC027553|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK012163|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK139654|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	NM_001081077|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)
mm9_v1_chr2_-_106814482_106814618	1.22797	BPTF.p2	BC054106|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK038273|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK134965|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK165082|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK012215|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	NM_001025102|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene
mm9_v1_chr5_-_135825744_135825913	1.22481	BPTF.p2	AY029192|Fkbp6|94244|FK506 binding protein 6	AF367710|Fkbp6|94244|FK506 binding protein 6	AF367711|Fkbp6|94244|FK506 binding protein 6	NM_033571|Fkbp6|94244|FK506 binding protein 6	AF367709|Fkbp6|94244|FK506 binding protein 6	AK090036|Fkbp6|94244|FK506 binding protein 6	BC139092|Fkbp6|94244|FK506 binding protein 6	BC139097|Fkbp6|94244|FK506 binding protein 6
mm9_v1_chr17_-_95149352_95149379	1.22481	BPTF.p2	BC099943|Mettl4|76781|methyltransferase like 4
mm9_v1_chr11_+_116393224_116393224	1.2219	BPTF.p2	AF068748|Sphk1|20698|sphingosine kinase 1	NM_001172475|Sphk1|20698|sphingosine kinase 1
mm9_v1_chr17_-_33783578_33783579	1.21886	BPTF.p2	AK150477|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M
mm9_v1_chr16_-_11220854_11220973	1.21832	BPTF.p2	AK218484|Gspt1|14852|G1 to S phase transition 1
mm9_v1_chr8_+_23348971_23348971	1.21588	BPTF.p2	AB039946|Thsd1|56229|thrombospondin, type I, domain 1	BC119603|Thsd1|56229|thrombospondin, type I, domain 1	NM_019576|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr13_+_83803830_83803849	1.21418	BPTF.p2	AK044589|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr8_+_131028275_131028322	1.21221	BPTF.p2	AK002673|Nrp1|18186|neuropilin 1
mm9_v1_chr5_-_149862867_149863025	1.21198	BPTF.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr6_-_99216494_99216530	1.21101	BPTF.p2	BC064764|Foxp1|108655|forkhead box P1	AK171994|Foxp1|108655|forkhead box P1	BC065386|Foxp1|108655|forkhead box P1	NM_001197321|Foxp1|108655|forkhead box P1	AK040800|Foxp1|108655|forkhead box P1
mm9_v1_chr9_-_119932620_119932715	1.21087	BPTF.p2	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr2_+_24831667_24831768	1.21061	BPTF.p2	AK038505|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC141365|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC141366|Pnpla7|241274|patatin-like phospholipase domain containing 7
mm9_v1_chr10_+_127669118_127669147	1.20793	BPTF.p2	BC052884|Timeless|21853|timeless homolog (Drosophila)	NM_001136082|Timeless|21853|timeless homolog (Drosophila)	NM_001164080|Timeless|21853|timeless homolog (Drosophila)	NM_001164081|Timeless|21853|timeless homolog (Drosophila)	AK162012|Timeless|21853|timeless homolog (Drosophila)	AK153838|Timeless|21853|timeless homolog (Drosophila)	BC064788|Timeless|21853|timeless homolog (Drosophila)	AB019001|Timeless|21853|timeless homolog (Drosophila)	AF071506|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr9_+_98197001_98197080	1.20776	BPTF.p2	BC005737|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	NM_144533|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK040783|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041526|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041897|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr1_-_37947185_37947215	1.20728	BPTF.p2	AK005342|Mitd1|69028|MIT, microtubule interacting and transport, domain containing 1
mm9_v1_chr17_+_19051285_19051285	1.20691	BPTF.p2	NM_001104549|Vmn2r97|627367|vomeronasal 2, receptor 97
mm9_v1_chr14_-_73725546_73725555	1.20652	BPTF.p2	M26391|Rb1|19645|retinoblastoma 1
mm9_v1_chrX_-_6618729_6618744	1.20595	BPTF.p2	AJ555465|Ccnb3|209091|cyclin B3	AJ555464|Ccnb3|209091|cyclin B3	NM_183015|Ccnb3|209091|cyclin B3
mm9_v1_chr11_-_29501956_29502097	1.20441	BPTF.p2	
mm9_v1_chr14_-_56563474_56563574	1.20391	BPTF.p2	BC139454|Cma1|17228|chymase 1, mast cell	BC139457|Cma1|17228|chymase 1, mast cell	NM_010780|Cma1|17228|chymase 1, mast cell	X68805|Cma1|17228|chymase 1, mast cell	M73760|Cma1|17228|chymase 1, mast cell
mm9_v1_chr17_-_74723283_74723283	1.20134	BPTF.p2	AY297538|Dpy30|66310|dpy-30 homolog (C. elegans)	NM_024428|Dpy30|66310|dpy-30 homolog (C. elegans)
mm9_v1_chr8_-_125152673_125152702	1.20133	BPTF.p2	AK148139|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm9_v1_chr14_-_58535467_58535641	1.20041	BPTF.p2	AK215594|Efha1|68514|EF hand domain family A1	AK219744|Efha1|68514|EF hand domain family A1	AK218511|Efha1|68514|EF hand domain family A1	AK180563|Efha1|68514|EF hand domain family A1	AK208098|Efha1|68514|EF hand domain family A1	AK218370|Efha1|68514|EF hand domain family A1	AK218406|Efha1|68514|EF hand domain family A1	AK218526|Efha1|68514|EF hand domain family A1
mm9_v1_chr3_-_135271247_135271409	1.20008	BPTF.p2	AK159423|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S66656|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S89033|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr14_+_17197678_17197719	1.19894	BPTF.p2	AK087535|Top2b|21974|topoisomerase (DNA) II beta	AK163043|Top2b|21974|topoisomerase (DNA) II beta	AK041054|Top2b|21974|topoisomerase (DNA) II beta	BC041106|Top2b|21974|topoisomerase (DNA) II beta	BC054541|Top2b|21974|topoisomerase (DNA) II beta	NM_009409|Top2b|21974|topoisomerase (DNA) II beta
mm9_v1_chr5_+_110564841_110564902	1.19887	BPTF.p2	NM_172717|Chfr|231600|checkpoint with forkhead and ring finger domains	AK039281|Chfr|231600|checkpoint with forkhead and ring finger domains	AK133154|Chfr|231600|checkpoint with forkhead and ring finger domains	AK154038|Chfr|231600|checkpoint with forkhead and ring finger domains	AK048930|Chfr|231600|checkpoint with forkhead and ring finger domains	AK147892|Chfr|231600|checkpoint with forkhead and ring finger domains	AK077629|Chfr|231600|checkpoint with forkhead and ring finger domains	AK148436|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155295|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155525|Chfr|231600|checkpoint with forkhead and ring finger domains	AK052473|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169193|Chfr|231600|checkpoint with forkhead and ring finger domains	BC049792|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169182|Chfr|231600|checkpoint with forkhead and ring finger domains
mm9_v1_chr8_+_67471046_67471202	1.19739	BPTF.p2	AK013998|Tmem192|73067|transmembrane protein 192	NM_001163747|Tmem192|73067|transmembrane protein 192	NM_028427|Tmem192|73067|transmembrane protein 192	AK168146|Tmem192|73067|transmembrane protein 192	AK046181|Tmem192|73067|transmembrane protein 192	AK132619|Tmem192|73067|transmembrane protein 192	BC020157|Tmem192|73067|transmembrane protein 192
mm9_v1_chr15_-_74813781_74813859	1.1971	BPTF.p2	AF232024|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC125350|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC132052|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC145087|Ly6i|57248|lymphocyte antigen 6 complex, locus I	NM_020498|Ly6i|57248|lymphocyte antigen 6 complex, locus I
mm9_v1_chr14_+_78304045_78304240	1.19312	BPTF.p2	AK136055|Epsti1|108670|epithelial stromal interaction 1 (breast)	NM_029495|Epsti1|108670|epithelial stromal interaction 1 (breast)	NM_178825|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK135710|Epsti1|108670|epithelial stromal interaction 1 (breast)	AY239224|Epsti1|108670|epithelial stromal interaction 1 (breast)	BC021821|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK077376|Epsti1|108670|epithelial stromal interaction 1 (breast)	BC020120|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK017174|Epsti1|108670|epithelial stromal interaction 1 (breast)	AY239223|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK030289|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK077223|Epsti1|108670|epithelial stromal interaction 1 (breast)
mm9_v1_chr17_+_48439681_48439838	1.19215	BPTF.p2	AK013294|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	AK037593|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	DQ087184|Treml2|328833|triggering receptor expressed on myeloid cells-like 2
mm9_v1_chrX_-_160465891_160465950	1.19091	BPTF.p2	BC034413|Car5b|56078|carbonic anhydrase 5b, mitochondrial	AK046691|Car5b|56078|carbonic anhydrase 5b, mitochondrial	AK085670|Car5b|56078|carbonic anhydrase 5b, mitochondrial	NM_181315|Car5b|56078|carbonic anhydrase 5b, mitochondrial
mm9_v1_chr4_-_116358626_116358644	1.18814	BPTF.p2	AK131819|AV051173|100502959|expressed sequence AV051173
mm9_v1_chr17_-_34133397_34133417	1.18794	BPTF.p2	M13197|H2-K1|14972|histocompatibility 2, K1, K region	M23901|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr17_+_18561067_18561067	1.18676	BPTF.p2	NM_001102581|Vmn2r95|328759|vomeronasal 2, receptor 95
mm9_v1_chr4_+_151413427_151413471	1.18664	BPTF.p2	AK047599|Nol9|74035|nucleolar protein 9	AK164493|Nol9|74035|nucleolar protein 9	NM_001159599|Nol9|74035|nucleolar protein 9	NM_028727|Nol9|74035|nucleolar protein 9	BC024877|Nol9|74035|nucleolar protein 9	AK172043|Nol9|74035|nucleolar protein 9	AK014568|Nol9|74035|nucleolar protein 9	AK050948|Nol9|74035|nucleolar protein 9	AK157956|Nol9|74035|nucleolar protein 9	BC125432|Nol9|74035|nucleolar protein 9	BC132099|Nol9|74035|nucleolar protein 9	AK157398|Nol9|74035|nucleolar protein 9	AK079935|Nol9|74035|nucleolar protein 9	AK046761|Nol9|74035|nucleolar protein 9	BC096599|Nol9|74035|nucleolar protein 9	AK042581|Nol9|74035|nucleolar protein 9	BC051109|Nol9|74035|nucleolar protein 9
mm9_v1_chr9_-_106060406_106060468	1.18606	BPTF.p2	AK052709|Glyctk|235582|glycerate kinase	BC036136|Glyctk|235582|glycerate kinase	BC025935|Glyctk|235582|glycerate kinase	AF455785|Glyctk|235582|glycerate kinase	BC025834|Glyctk|235582|glycerate kinase	BC033063|Glyctk|235582|glycerate kinase	AK049425|Glyctk|235582|glycerate kinase	AK050182|Glyctk|235582|glycerate kinase	NM_001039586|Glyctk|235582|glycerate kinase	NM_174846|Glyctk|235582|glycerate kinase
mm9_v1_chr11_-_95973271_95973275	1.18572	BPTF.p2	AK166939|Calcoco2|76815|calcium binding and coiled-coil domain 2	AF490344|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK010816|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK145542|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK166710|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK166756|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167009|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167172|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167291|Calcoco2|76815|calcium binding and coiled-coil domain 2	NM_001100177|Calcoco2|76815|calcium binding and coiled-coil domain 2	NM_029755|Calcoco2|76815|calcium binding and coiled-coil domain 2
mm9_v1_chr12_+_79962998_79963115	1.18393	BPTF.p2	BC016448|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	BC016497|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	AK143499|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	NM_026114|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	AK167763|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	BC005463|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha
mm9_v1_chr8_+_131256428_131256477	1.18372	BPTF.p2	AK008343|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr10_+_60638341_60638497	1.18303	BPTF.p2	AJ249392|Tbata|65971|thymus, brain and testes associated	AK038284|Tbata|65971|thymus, brain and testes associated	AK088524|Tbata|65971|thymus, brain and testes associated	AY243459|Tbata|65971|thymus, brain and testes associated	AY243458|Tbata|65971|thymus, brain and testes associated
mm9_v1_chr19_+_60831889_60831889	1.183	BPTF.p2	BC085512|Nanos1|332397|nanos homolog 1 (Drosophila)	NM_178421|Nanos1|332397|nanos homolog 1 (Drosophila)
mm9_v1_chr11_+_81849074_81849163	1.18164	BPTF.p2	AK150937|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153468|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153520|Ccl2|20296|chemokine (C-C motif) ligand 2	NM_011333|Ccl2|20296|chemokine (C-C motif) ligand 2	AK132590|Ccl2|20296|chemokine (C-C motif) ligand 2	AK151789|Ccl2|20296|chemokine (C-C motif) ligand 2	AK153443|Ccl2|20296|chemokine (C-C motif) ligand 2	BC055070|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145867|Ccl2|20296|chemokine (C-C motif) ligand 2	BC145869|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065929|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065930|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065931|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065932|Ccl2|20296|chemokine (C-C motif) ligand 2	AF065933|Ccl2|20296|chemokine (C-C motif) ligand 2	CT010187|Ccl2|20296|chemokine (C-C motif) ligand 2
mm9_v1_chr17_+_53706283_53706299	1.18038	BPTF.p2	AK156290|Kat2b|18519|K(lysine) acetyltransferase 2B	NM_020005|Kat2b|18519|K(lysine) acetyltransferase 2B
mm9_v1_chr6_-_57340560_57340659	1.17891	BPTF.p2	NM_134181|Vmn1r18|171199|vomeronasal 1 receptor 18	BC132061|Vmn1r18|171199|vomeronasal 1 receptor 18	BC138409|Vmn1r18|171199|vomeronasal 1 receptor 18
mm9_v1_chr3_-_88214230_88214284	1.17737	BPTF.p2	BC037139|Pmf1|67037|polyamine-modulated factor 1	BC049223|Pmf1|67037|polyamine-modulated factor 1	AK011174|Pmf1|67037|polyamine-modulated factor 1	AK012113|Pmf1|67037|polyamine-modulated factor 1	AK168200|Pmf1|67037|polyamine-modulated factor 1	NM_025928|Pmf1|67037|polyamine-modulated factor 1	AK013787|Pmf1|67037|polyamine-modulated factor 1	AF348509|Pmf1|67037|polyamine-modulated factor 1	AF348510|Pmf1|67037|polyamine-modulated factor 1	AK150603|Pmf1|67037|polyamine-modulated factor 1	AK078308|Pmf1|67037|polyamine-modulated factor 1
mm9_v1_chr4_-_128639595_128639690	1.17607	BPTF.p2	BC138973|Adc|242669|arginine decarboxylase	BC138974|Adc|242669|arginine decarboxylase	NM_172875|Adc|242669|arginine decarboxylase	BC065772|Adc|242669|arginine decarboxylase	BC028775|Adc|242669|arginine decarboxylase	AK047522|Adc|242669|arginine decarboxylase	AK077201|Adc|242669|arginine decarboxylase	AK080568|Adc|242669|arginine decarboxylase	AK154564|Adc|242669|arginine decarboxylase	AK148717|Adc|242669|arginine decarboxylase
mm9_v1_chr9_+_117161650_117161701	1.17571	BPTF.p2	
mm9_v1_chr8_+_11558428_11558472	1.1755	BPTF.p2	AK035490|Ing1|26356|inhibitor of growth family, member 1	AK157424|Ing1|26356|inhibitor of growth family, member 1	AF177756|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chr13_-_74075092_74075243	1.17399	BPTF.p2	BC126946|Trip13|69716|thyroid hormone receptor interactor 13	BC064315|Trip13|69716|thyroid hormone receptor interactor 13	AK151568|Trip13|69716|thyroid hormone receptor interactor 13	AK010336|Trip13|69716|thyroid hormone receptor interactor 13	AK142463|Trip13|69716|thyroid hormone receptor interactor 13	AK146877|Trip13|69716|thyroid hormone receptor interactor 13	NM_027182|Trip13|69716|thyroid hormone receptor interactor 13
mm9_v1_chr6_-_113433154_113433156	1.17296	BPTF.p2	AK033890|Il17rc|171095|interleukin 17 receptor C	AK040950|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr2_-_26761162_26761187	1.1696	BPTF.p2	AK207179|Med22|20933|mediator complex subunit 22	AK191222|Med22|20933|mediator complex subunit 22
mm9_v1_chr17_-_33918382_33918492	1.16798	BPTF.p2	AF169313|Angptl4|57875|angiopoietin-like 4	AB054540|Angptl4|57875|angiopoietin-like 4	AF123261|Angptl4|57875|angiopoietin-like 4	AF278699|Angptl4|57875|angiopoietin-like 4	BC025797|Angptl4|57875|angiopoietin-like 4	BC006611|Angptl4|57875|angiopoietin-like 4	BC021343|Angptl4|57875|angiopoietin-like 4	AK032491|Angptl4|57875|angiopoietin-like 4	AK132761|Angptl4|57875|angiopoietin-like 4	AK134419|Angptl4|57875|angiopoietin-like 4
mm9_v1_chr10_+_39451923_39451975	1.16723	BPTF.p2	AK032532|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	BC048946|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	AB031049|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	NM_011264|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm9_v1_chr14_+_75721556_75721651	1.1659	BPTF.p2	BC094575|Zc3h13|67302|zinc finger CCCH type containing 13
mm9_v1_chr3_+_109376824_109376976	1.16568	BPTF.p2	AF140280|Vav3|57257|vav 3 oncogene	NM_146139|Vav3|57257|vav 3 oncogene	AK147053|Vav3|57257|vav 3 oncogene	BC027242|Vav3|57257|vav 3 oncogene
mm9_v1_chr17_+_45701100_45701100	1.16505	BPTF.p2	AK167343|Slc35b2|73836|solute carrier family 35, member B2	NM_028662|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr11_-_102178559_102178600	1.16484	BPTF.p2	AK158861|Ubtf|21429|upstream binding transcription factor, RNA polymerase I	NM_001044383|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr14_+_54980488_54980535	1.1648	BPTF.p2	AK139484|Oxa1l|69089|oxidase assembly 1-like	AK154304|Oxa1l|69089|oxidase assembly 1-like	AK007567|Oxa1l|69089|oxidase assembly 1-like	AK087756|Oxa1l|69089|oxidase assembly 1-like	AK028379|Oxa1l|69089|oxidase assembly 1-like	AK052432|Oxa1l|69089|oxidase assembly 1-like	AK077624|Oxa1l|69089|oxidase assembly 1-like	AK154532|Oxa1l|69089|oxidase assembly 1-like	AK163101|Oxa1l|69089|oxidase assembly 1-like	AK170898|Oxa1l|69089|oxidase assembly 1-like	NM_026936|Oxa1l|69089|oxidase assembly 1-like	AK044817|Oxa1l|69089|oxidase assembly 1-like	BC027191|Oxa1l|69089|oxidase assembly 1-like
mm9_v1_chr3_+_152377070_152377075	1.15777	BPTF.p2	AK082806|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr5_-_92483744_92484066	1.15676	BPTF.p2	AK169571|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK220349|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr9_+_27598853_27598893	1.15584	BPTF.p2	BC076581|Opcml|330908|opioid binding protein/cell adhesion molecule-like	NM_177906|Opcml|330908|opioid binding protein/cell adhesion molecule-like	AK013792|Opcml|330908|opioid binding protein/cell adhesion molecule-like
mm9_v1_chr6_-_70067577_70067640	1.15555	BPTF.p2	M95574|Gm10883|384419|predicted gene 10883
mm9_v1_chr3_+_19857375_19857397	1.15535	BPTF.p2	AK033842|Cp|12870|ceruloplasmin
mm9_v1_chr17_+_47027553_47027615	1.15509	BPTF.p2	NM_178385|Tbcc|72726|tubulin-specific chaperone C
mm9_v1_chr4_+_155484072_155484109	1.15492	BPTF.p2	AK029276|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	BC004010|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_145557|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	NM_177205|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene	AK034620|9430015G10Rik|230996|RIKEN cDNA 9430015G10 gene
mm9_v1_chr4_-_126738303_126738384	1.15363	BPTF.p2	BC064774|Zmym1|68310|zinc finger, MYM domain containing 1	AK138687|Zmym1|68310|zinc finger, MYM domain containing 1	AK166769|Zmym1|68310|zinc finger, MYM domain containing 1	AK049568|Zmym1|68310|zinc finger, MYM domain containing 1	AK035618|Zmym1|68310|zinc finger, MYM domain containing 1	NM_026670|Zmym1|68310|zinc finger, MYM domain containing 1	AK167508|Zmym1|68310|zinc finger, MYM domain containing 1	AK016783|Zmym1|68310|zinc finger, MYM domain containing 1	AK044538|Zmym1|68310|zinc finger, MYM domain containing 1
mm9_v1_chr16_-_89048013_89048143	1.1525	BPTF.p2	AF345293|Krtap16-10|71369|keratin associated protein 16-10	BC132612|Krtap16-8|68484|keratin associated protein 16-8	AF345298|Krtap16-8|68484|keratin associated protein 16-8	BC059086|Krtap16-8|68484|keratin associated protein 16-8	AK003281|Krtap16-8|68484|keratin associated protein 16-8	NM_130856|Krtap16-8|68484|keratin associated protein 16-8
mm9_v1_chr1_-_167932735_167932770	1.15182	BPTF.p2	X68363|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68362|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489477|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489478|Pou2f1|18986|POU domain, class 2, transcription factor 1	BC066201|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68364|Pou2f1|18986|POU domain, class 2, transcription factor 1	AF508939|Pou2f1|18986|POU domain, class 2, transcription factor 1	AY177625|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK044830|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK028237|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_011137|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198932|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr12_+_75008853_75009062	1.15033	BPTF.p2	NM_010431|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK034087|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK150367|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK138944|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK017853|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	BC026139|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AF003695|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr11_-_78020699_78020746	1.14883	BPTF.p2	
mm9_v1_chr6_+_52195241_52195300	1.14808	BPTF.p2	U20366|Hoxa11as|15397|HOXA11 antisense RNA (non-protein coding)
mm9_v1_chr4_+_130219280_130219280	1.14286	BPTF.p2	AK052145|Pum1|80912|pumilio 1 (Drosophila)	AK161135|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr16_-_33967064_33967149	1.13957	BPTF.p2	BC003887|Umps|22247|uridine monophosphate synthetase	BC095981|Umps|22247|uridine monophosphate synthetase	AK159808|Umps|22247|uridine monophosphate synthetase	AK159955|Umps|22247|uridine monophosphate synthetase	AK035821|Umps|22247|uridine monophosphate synthetase	AK035997|Umps|22247|uridine monophosphate synthetase	AK090102|Umps|22247|uridine monophosphate synthetase	AK135187|Umps|22247|uridine monophosphate synthetase	NM_009471|Umps|22247|uridine monophosphate synthetase
mm9_v1_chr13_-_21842373_21842421	1.13919	BPTF.p2	BC119612|Hist1h4k|319160|histone cluster 1, H4k	NM_178211|Hist1h4k|319160|histone cluster 1, H4k	BC096767|Hist1h4k|319160|histone cluster 1, H4k	AK139521|Hist1h4k|319160|histone cluster 1, H4k	BC117010|Hist1h4k|319160|histone cluster 1, H4k	BC117012|Hist1h4k|319160|histone cluster 1, H4k
mm9_v1_chr12_-_82669460_82669460	1.13886	BPTF.p2	AK014827|Adam21|56622|a disintegrin and metallopeptidase domain 21	NM_020330|Adam21|56622|a disintegrin and metallopeptidase domain 21
mm9_v1_chr13_-_24853723_24853834	1.13869	BPTF.p2	AF068780|Gmnn|57441|geminin	BC020061|Gmnn|57441|geminin	AK131959|Gmnn|57441|geminin	NM_020567|Gmnn|57441|geminin
mm9_v1_chr13_-_67784403_67784492	1.13689	BPTF.p2	BC082605|Zfp738|408068|zinc finger protein 738	NM_001001187|Zfp738|408068|zinc finger protein 738	AK076179|Zfp738|408068|zinc finger protein 738
mm9_v1_chr2_-_136942066_136942255	1.13416	BPTF.p2	NM_013822|Jag1|16449|jagged 1	AK137092|Jag1|16449|jagged 1	AF171092|Jag1|16449|jagged 1
mm9_v1_chr19_+_5601857_5601905	1.13386	BPTF.p2	NM_026616|Rnaseh2c|68209|ribonuclease H2, subunit C	AF346604|Rnaseh2c|68209|ribonuclease H2, subunit C	AK018776|Rnaseh2c|68209|ribonuclease H2, subunit C	AK011556|Rnaseh2c|68209|ribonuclease H2, subunit C	BC024333|Rnaseh2c|68209|ribonuclease H2, subunit C
mm9_v1_chr13_+_78337168_78337277	1.133	BPTF.p2	AK082108|A830082K12Rik|320174|RIKEN cDNA A830082K12 gene
mm9_v1_chr6_+_113102884_113103027	1.13249	BPTF.p2	AK088328|Setd5|72895|SET domain containing 5
mm9_v1_chr15_-_36701729_36701849	1.13223	BPTF.p2	AK149013|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr13_+_95335701_95335710	1.13006	BPTF.p2	
mm9_v1_chr10_-_6080145_6080228	1.13002	BPTF.p2	BC138365|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	BC138364|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB020886|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	BC071185|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AF326228|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB051563|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB025278|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AK053844|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	NM_031185|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12
mm9_v1_chr17_+_29629987_29630031	1.12858	BPTF.p2	AK154127|Pim1|18712|proviral integration site 1
mm9_v1_chr7_-_87543749_87543798	1.12747	BPTF.p2	X54056|Furin|18550|furin (paired basic amino acid cleaving enzyme)	BC048234|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr3_+_86790507_86790507	1.12708	BPTF.p2	BC057149|Cd1d2|12480|CD1d2 antigen	NM_007640|Cd1d2|12480|CD1d2 antigen
mm9_v1_chr4_+_141302589_141302623	1.12363	BPTF.p2	NM_001081408|Agmat|75986|agmatine ureohydrolase (agmatinase)
mm9_v1_chr19_-_39723518_39723548	1.11667	BPTF.p2	BC092260|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	BC106142|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	NM_001024719|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	AK149389|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67
mm9_v1_chr3_+_152377069_152377069	1.1114	BPTF.p2	AK013853|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	AK160801|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr5_-_100392845_100392900	1.11139	BPTF.p2	AK053251|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr7_+_130267661_130267769	1.11111	BPTF.p2	AK147327|Tnrc6a|233833|trinucleotide repeat containing 6a	AK008599|Tnrc6a|233833|trinucleotide repeat containing 6a	BC026849|Tnrc6a|233833|trinucleotide repeat containing 6a	AK083848|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr5_-_5749270_5749396	1.10897	BPTF.p2	AK144312|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	AY029584|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	BC061023|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	AK010437|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	NM_027399|Steap1|70358|six transmembrane epithelial antigen of the prostate 1
mm9_v1_chr5_-_130175960_130176006	1.10836	BPTF.p2	BC058553|Zfp11|22648|zinc finger protein 11	NM_172462|Zfp11|22648|zinc finger protein 11	AK032872|Zfp11|22648|zinc finger protein 11
mm9_v1_chr8_+_4238862_4238907	1.1083	BPTF.p2	AB005654|Map2k7|26400|mitogen-activated protein kinase kinase 7	AK028772|Map2k7|26400|mitogen-activated protein kinase kinase 7	U74463|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr1_-_71461469_71461483	1.10789	BPTF.p2	AK014713|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	AK028781|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	AK029031|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	NM_175210|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12
mm9_v1_chr11_+_99734702_99734753	1.10632	BPTF.p2	NM_015741|Krtap9-1|16705|keratin associated protein 9-1	BC116210|Krtap9-1|16705|keratin associated protein 9-1
mm9_v1_chr18_+_80403593_80403727	1.10607	BPTF.p2	BC031634|Txnl4a|27366|thioredoxin-like 4A	BC014770|Txnl4a|27366|thioredoxin-like 4A	NM_001042408|Txnl4a|27366|thioredoxin-like 4A	AK011717|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr15_-_83425479_83425610	1.10418	BPTF.p2	AM690756|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	BC055368|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK084879|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK134345|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK150116|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	AK143496|Ttll12|223723|tubulin tyrosine ligase-like family, member 12	NM_183017|Ttll12|223723|tubulin tyrosine ligase-like family, member 12
mm9_v1_chr9_+_44446796_44446798	1.10394	BPTF.p2	AK156303|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr8_+_23057233_23057262	1.10394	BPTF.p2	AJ437649|Defb13|246083|defensin beta 13	NM_139223|Defb13|246083|defensin beta 13	AJ575427|Defb13|246083|defensin beta 13
mm9_v1_chr17_-_15700264_15700286	1.10353	BPTF.p2	FJ212287|Prdm9|213389|PR domain containing 9	NM_144809|Prdm9|213389|PR domain containing 9
mm9_v1_chr10_-_41529396_41529437	1.10191	BPTF.p2	AF397908|Cep57l1|103268|centrosomal protein 57-like 1	AK012710|Cep57l1|103268|centrosomal protein 57-like 1	AK010530|Cep57l1|103268|centrosomal protein 57-like 1	AK041460|Cep57l1|103268|centrosomal protein 57-like 1	NM_026643|Cep57l1|103268|centrosomal protein 57-like 1	NM_029132|Cep57l1|103268|centrosomal protein 57-like 1
mm9_v1_chr1_-_51535232_51535262	1.09738	BPTF.p2	AK167541|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK167652|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK028886|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK031015|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK042351|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK049396|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK051607|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077226|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077767|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK079434|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK083915|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK163613|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK166300|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AY880264|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	NM_028696|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK076824|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A
mm9_v1_chr11_+_98667577_98667599	1.09625	BPTF.p2	AK031902|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chr19_+_3768021_3768138	1.09538	BPTF.p2	AY555192|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK082660|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK054093|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm9_v1_chr1_+_169298077_169298107	1.09415	BPTF.p2	AK208220|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1
mm9_v1_chr1_-_108610520_108610597	1.09397	BPTF.p2	BC095964|Bcl2|12043|B-cell leukemia/lymphoma 2	AK042257|Bcl2|12043|B-cell leukemia/lymphoma 2
mm9_v1_chr5_-_137510950_137511054	1.09385	BPTF.p2	AK192071|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr16_-_64786146_64786199	1.09249	BPTF.p2	BC068018|Zfp654|72020|zinc finger protein 654	NM_028059|Zfp654|72020|zinc finger protein 654	AK005508|Zfp654|72020|zinc finger protein 654
mm9_v1_chr6_-_85463535_85463588	1.08939	BPTF.p2	NM_020596|Egr4|13656|early growth response 4	AK141637|Egr4|13656|early growth response 4
mm9_v1_chr2_+_163978972_163979077	1.08889	BPTF.p2	AK085750|Stk4|58231|serine/threonine kinase 4
mm9_v1_chr11_-_102168258_102168260	1.08884	BPTF.p2	AK014791|Ubtf|21429|upstream binding transcription factor, RNA polymerase I	AK076512|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr7_-_108437135_108437187	1.08733	BPTF.p2	
mm9_v1_chrX_-_162948399_162948409	1.08689	BPTF.p2	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr17_+_34701239_34701309	1.08689	BPTF.p2	NM_010929|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166261|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166493|Notch4|18132|Notch gene homolog 4 (Drosophila)	M80456|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC138044|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC145114|Notch4|18132|Notch gene homolog 4 (Drosophila)
mm9_v1_chr14_-_56300568_56300659	1.08681	BPTF.p2	BC030347|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	AK144592|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	AK016456|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	AF518764|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	AK090324|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	AK028952|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	AK011154|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	BC017142|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	AF214013|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2	NM_145705|Tinf2|28113|Terf1 (TRF1)-interacting nuclear factor 2
mm9_v1_chr8_+_49184445_49184445	1.08566	BPTF.p2	NM_001161516|Dctd|320685|dCMP deaminase
mm9_v1_chr1_+_162908733_162908776	1.08557	BPTF.p2	NM_080844|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	BC019447|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm9_v1_chr18_+_24363784_24363941	1.08444	BPTF.p2	NM_013814|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	BC056215|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm9_v1_chr7_-_132635008_132635055	1.08202	BPTF.p2	BC031848|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	BC049558|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	NM_026330|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr6_+_122999979_123000091	1.08194	BPTF.p2	NM_001190310|Clec4b1|69810|C-type lectin domain family 4, member b1	NM_027218|Clec4b1|69810|C-type lectin domain family 4, member b1	AY230259|Clec4b1|69810|C-type lectin domain family 4, member b1	AY230260|Clec4b1|69810|C-type lectin domain family 4, member b1	AK007794|Clec4b1|69810|C-type lectin domain family 4, member b1	AY365134|Clec4b1|69810|C-type lectin domain family 4, member b1
mm9_v1_chr1_-_13117243_13117243	1.08127	BPTF.p2	AK134292|Prdm14|383491|PR domain containing 14	NM_001081209|Prdm14|383491|PR domain containing 14
mm9_v1_chr5_-_21290971_21291070	1.0798	BPTF.p2	AK013295|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	D63784|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	NM_009584|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	BC021755|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK167991|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK131964|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161376|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK162409|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK136951|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	BC052027|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK169850|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr16_+_18498963_18499004	1.07926	BPTF.p2	NM_023120|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK158210|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK166195|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	AK173227|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC029862|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	BC024635|Gnb1l|13972|guanine nucleotide binding protein (G protein), beta polypeptide 1-like
mm9_v1_chr5_-_123271283_123271353	1.0772	BPTF.p2	AK147951|Anapc5|59008|anaphase-promoting complex subunit 5	BC046804|Anapc5|59008|anaphase-promoting complex subunit 5	AK075969|Anapc5|59008|anaphase-promoting complex subunit 5	AK159713|Anapc5|59008|anaphase-promoting complex subunit 5	AK159916|Anapc5|59008|anaphase-promoting complex subunit 5	AK167561|Anapc5|59008|anaphase-promoting complex subunit 5	AK168737|Anapc5|59008|anaphase-promoting complex subunit 5	AK168814|Anapc5|59008|anaphase-promoting complex subunit 5	AB041593|Anapc5|59008|anaphase-promoting complex subunit 5	AK151314|Anapc5|59008|anaphase-promoting complex subunit 5	AK151905|Anapc5|59008|anaphase-promoting complex subunit 5	AK152981|Anapc5|59008|anaphase-promoting complex subunit 5	AK153373|Anapc5|59008|anaphase-promoting complex subunit 5	AK153422|Anapc5|59008|anaphase-promoting complex subunit 5	AK159204|Anapc5|59008|anaphase-promoting complex subunit 5	AK148679|Anapc5|59008|anaphase-promoting complex subunit 5	AK049719|Anapc5|59008|anaphase-promoting complex subunit 5	AK169196|Anapc5|59008|anaphase-promoting complex subunit 5	AK088327|Anapc5|59008|anaphase-promoting complex subunit 5	NM_001042491|Anapc5|59008|anaphase-promoting complex subunit 5	NM_021505|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr2_+_87366184_87366358	1.07663	BPTF.p2	BC090254|Srp9|27058|signal recognition particle 9
mm9_v1_chr1_+_40082070_40082114	1.07339	BPTF.p2	AK159799|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr2_+_13500271_13500328	1.07221	BPTF.p2	AK181650|Vim|22352|vimentin	AK196009|Vim|22352|vimentin	AK197870|Vim|22352|vimentin	AK203908|Vim|22352|vimentin
mm9_v1_chr3_-_27316628_27316630	1.07173	BPTF.p2	AK039335|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr12_-_80081732_80081802	1.07173	BPTF.p2	BC079613|Tmem229b|268567|transmembrane protein 229B	AK036593|Tmem229b|268567|transmembrane protein 229B	AK169759|Tmem229b|268567|transmembrane protein 229B	AK151405|Tmem229b|268567|transmembrane protein 229B	AK149922|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chr17_-_25023253_25023304	1.07015	BPTF.p2	AK169896|Nubp2|26426|nucleotide binding protein 2	AF114169|Nubp2|26426|nucleotide binding protein 2	BC012635|Nubp2|26426|nucleotide binding protein 2	AK003816|Nubp2|26426|nucleotide binding protein 2	NM_011956|Nubp2|26426|nucleotide binding protein 2
mm9_v1_chr18_-_53904193_53904270	1.06785	BPTF.p2	AK044952|Cep120|225523|centrosomal protein 120	BC053439|Cep120|225523|centrosomal protein 120	NM_178686|Cep120|225523|centrosomal protein 120	AK089236|Cep120|225523|centrosomal protein 120	AK089242|Cep120|225523|centrosomal protein 120	AK044808|Cep120|225523|centrosomal protein 120	AK079319|Cep120|225523|centrosomal protein 120	AK047594|Cep120|225523|centrosomal protein 120	AK038916|Cep120|225523|centrosomal protein 120
mm9_v1_chr17_-_26232411_26232456	1.06666	BPTF.p2	AF153451|Nme4|56520|non-metastatic cells 4, protein expressed in	NM_019731|Nme4|56520|non-metastatic cells 4, protein expressed in	AK011573|Nme4|56520|non-metastatic cells 4, protein expressed in	AK017724|Nme4|56520|non-metastatic cells 4, protein expressed in	AF288690|Nme4|56520|non-metastatic cells 4, protein expressed in	BC027277|Nme4|56520|non-metastatic cells 4, protein expressed in	AK012805|Nme4|56520|non-metastatic cells 4, protein expressed in
mm9_v1_chr1_+_60761789_60761789	1.06623	BPTF.p2	BC002266|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr11_-_99471502_99471502	1.06575	BPTF.p2	NM_001099346|Gm11937|100041488|predicted gene 11937
mm9_v1_chr15_-_38230397_38230491	1.06461	BPTF.p2	BC003316|Klf10|21847|Kruppel-like factor 10	Z36270|Klf10|21847|Kruppel-like factor 10	AK154719|Klf10|21847|Kruppel-like factor 10	AF064088|Klf10|21847|Kruppel-like factor 10	AK043433|Klf10|21847|Kruppel-like factor 10	AK079679|Klf10|21847|Kruppel-like factor 10	AF049879|Klf10|21847|Kruppel-like factor 10	NM_013692|Klf10|21847|Kruppel-like factor 10	AK004906|Klf10|21847|Kruppel-like factor 10
mm9_v1_chr10_+_23571267_23571295	1.06423	BPTF.p2	NM_011979|Vnn3|26464|vanin 3	AJ132103|Vnn3|26464|vanin 3	BC111521|Vnn3|26464|vanin 3
mm9_v1_chrX_+_93291377_93291457	1.06365	BPTF.p2	AK133819|Msn|17698|moesin	AK145746|Msn|17698|moesin	AK150869|Msn|17698|moesin	AK153210|Msn|17698|moesin	NM_010833|Msn|17698|moesin	AK031171|Msn|17698|moesin	S47577|Msn|17698|moesin	BC047366|Msn|17698|moesin	AK157701|Msn|17698|moesin	AK087001|Msn|17698|moesin	AK088336|Msn|17698|moesin
mm9_v1_chr9_-_34983552_34983647	1.0627	BPTF.p2	AK171018|Dcps|69305|decapping enzyme, scavenger	AK005584|Dcps|69305|decapping enzyme, scavenger	NM_027030|Dcps|69305|decapping enzyme, scavenger	AY040775|Dcps|69305|decapping enzyme, scavenger	AK169641|Dcps|69305|decapping enzyme, scavenger	BC016273|Dcps|69305|decapping enzyme, scavenger	AK078253|Dcps|69305|decapping enzyme, scavenger
mm9_v1_chr9_+_38525852_38525929	1.06242	BPTF.p2	NM_001145957|Vwa5a|67776|von Willebrand factor A domain containing 5A	NM_172767|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK161193|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK054497|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK136934|Vwa5a|67776|von Willebrand factor A domain containing 5A	AY366502|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK041397|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK019914|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK053665|Vwa5a|67776|von Willebrand factor A domain containing 5A	BC065153|Vwa5a|67776|von Willebrand factor A domain containing 5A
mm9_v1_chr5_-_36071914_36071932	1.06204	BPTF.p2	NM_194344|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1
mm9_v1_chr18_-_70689894_70689974	1.0608	BPTF.p2	AK145244|Poli|26447|polymerase (DNA directed), iota	AK154537|Poli|26447|polymerase (DNA directed), iota	BC057575|Poli|26447|polymerase (DNA directed), iota	AK163784|Poli|26447|polymerase (DNA directed), iota	AF151691|Poli|26447|polymerase (DNA directed), iota	NM_011972|Poli|26447|polymerase (DNA directed), iota
mm9_v1_chr9_-_44226119_44226149	1.06052	BPTF.p2	AK162606|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr10_-_39451648_39451682	1.05951	BPTF.p2	AK087502|E130307A14Rik|327744|RIKEN cDNA E130307A14 gene
mm9_v1_chr5_-_121262512_121262534	1.05948	BPTF.p2	AK028986|Oas1c|114643|2'-5' oligoadenylate synthetase 1C	NM_033541|Oas1c|114643|2'-5' oligoadenylate synthetase 1C
mm9_v1_chr6_-_128388673_128388715	1.05607	BPTF.p2	AK051433|Fkbp4|14228|FK506 binding protein 4	AK159211|Fkbp4|14228|FK506 binding protein 4
mm9_v1_chr3_+_51465127_51465166	1.05542	BPTF.p2	BC132234|Mgst2|211666|microsomal glutathione S-transferase 2	BC132260|Mgst2|211666|microsomal glutathione S-transferase 2	BC145529|Mgst2|211666|microsomal glutathione S-transferase 2	BC028535|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr5_-_33128264_33128313	1.05483	BPTF.p2	AK033483|Pisd|320951|phosphatidylserine decarboxylase	AK162028|Pisd|320951|phosphatidylserine decarboxylase	BC094594|Pisd|320951|phosphatidylserine decarboxylase	BC070408|Pisd|320951|phosphatidylserine decarboxylase	AK034656|Pisd|320951|phosphatidylserine decarboxylase	AK162737|Pisd|320951|phosphatidylserine decarboxylase	BC116695|Pisd|320951|phosphatidylserine decarboxylase	BC117509|Pisd|320951|phosphatidylserine decarboxylase	NM_177298|Pisd|320951|phosphatidylserine decarboxylase	AK167554|Pisd|320951|phosphatidylserine decarboxylase
mm9_v1_chr11_-_82853975_82854034	1.05416	BPTF.p2	BC115828|Slfn10-ps|237887|schlafen 10, pseudogene	AY261803|Slfn10-ps|237887|schlafen 10, pseudogene	AK144698|Slfn10-ps|237887|schlafen 10, pseudogene	AY261802|Slfn10-ps|237887|schlafen 10, pseudogene	NM_181542|Slfn10-ps|237887|schlafen 10, pseudogene
mm9_v1_chr3_+_87180308_87180388	1.05361	BPTF.p2	AK041750|Fcrl1|229499|Fc receptor-like 1	NM_001136236|Fcrl1|229499|Fc receptor-like 1	NM_153090|Fcrl1|229499|Fc receptor-like 1	NM_178165|Fcrl1|229499|Fc receptor-like 1	AK038494|Fcrl1|229499|Fc receptor-like 1	AK156528|Fcrl1|229499|Fc receptor-like 1	AK156985|Fcrl1|229499|Fc receptor-like 1	AY506554|Fcrl1|229499|Fc receptor-like 1	AY506555|Fcrl1|229499|Fc receptor-like 1	AF329485|Fcrl1|229499|Fc receptor-like 1	BC055830|Fcrl1|229499|Fc receptor-like 1	AY158088|Fcrl1|229499|Fc receptor-like 1	AY158089|Fcrl1|229499|Fc receptor-like 1
mm9_v1_chr7_+_113957642_113957692	1.04871	BPTF.p2	AK015248|Olfr701|66786|olfactory receptor 701	AK016560|Olfr701|66786|olfactory receptor 701	NM_028910|Olfr701|66786|olfactory receptor 701	AK017036|Olfr701|66786|olfactory receptor 701
mm9_v1_chr7_-_113358823_113358853	1.04682	BPTF.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr7_-_113102453_113102483	1.04682	BPTF.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr8_-_74090499_74090547	1.04636	BPTF.p2	BC021911|Nxnl1|234404|nucleoredoxin-like 1	BC017153|Nxnl1|234404|nucleoredoxin-like 1	NM_145598|Nxnl1|234404|nucleoredoxin-like 1
mm9_v1_chr15_-_74879242_74879259	1.04601	BPTF.p2	AK088782|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	AK143577|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	BC010764|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	NM_010741|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1
mm9_v1_chr5_-_143579060_143579087	1.04477	BPTF.p2	BC049818|Tnrc18|231861|trinucleotide repeat containing 18	NM_001122730|Tnrc18|231861|trinucleotide repeat containing 18	NM_178242|Tnrc18|231861|trinucleotide repeat containing 18
mm9_v1_chr1_-_123464468_123464558	1.04469	BPTF.p2	AK075864|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC017160|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK019845|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC103776|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC141230|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC141231|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK012878|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC028246|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK012706|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	NM_025860|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
mm9_v1_chr5_+_110681753_110681764	1.04468	BPTF.p2	AK134966|Ankle2|71782|ankyrin repeat and LEM domain containing 2
mm9_v1_chr4_+_51229549_51229549	1.04416	BPTF.p2	AK015651|Cylc2|74914|cylicin, basic protein of sperm head cytoskeleton 2	NM_001162865|Cylc2|74914|cylicin, basic protein of sperm head cytoskeleton 2
mm9_v1_chr4_-_107890526_107890526	1.04266	BPTF.p2	NM_001167936|Zyg11a|230590|zyg-11 homolog A (C. elegans)
mm9_v1_chr11_+_109224104_109224273	1.04031	BPTF.p2	NM_010303|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK011851|Gna13|14674|guanine nucleotide binding protein, alpha 13	M63660|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK149766|Gna13|14674|guanine nucleotide binding protein, alpha 13	BC057665|Gna13|14674|guanine nucleotide binding protein, alpha 13
mm9_v1_chr5_+_90919739_90919752	1.03982	BPTF.p2	NM_007423|Afp|11576|alpha fetoprotein
mm9_v1_chr6_+_17643923_17644228	1.03945	BPTF.p2	BC024652|St7|64213|suppression of tumorigenicity 7	AY007792|St7|64213|suppression of tumorigenicity 7	AY007793|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr2_+_136717324_136717369	1.03843	BPTF.p2	BC067037|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr8_-_49075838_49075874	1.03669	BPTF.p2	AK147944|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr5_-_66542128_66542136	1.03664	BPTF.p2	AK089362|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr10_-_77647837_77647908	1.03617	BPTF.p2	AB041855|Pwp2|110816|PWP2 periodic tryptophan protein homolog (yeast)	BC112325|Pwp2|110816|PWP2 periodic tryptophan protein homolog (yeast)	BC117903|Pwp2|110816|PWP2 periodic tryptophan protein homolog (yeast)	BC128480|Pwp2|110816|PWP2 periodic tryptophan protein homolog (yeast)	AK088254|Pwp2|110816|PWP2 periodic tryptophan protein homolog (yeast)	AK088983|Pwp2|110816|PWP2 periodic tryptophan protein homolog (yeast)	NM_029546|Pwp2|110816|PWP2 periodic tryptophan protein homolog (yeast)
mm9_v1_chr5_-_137755406_137755631	1.03521	BPTF.p2	AK146823|Trip6|22051|thyroid hormone receptor interactor 6	AK159387|Trip6|22051|thyroid hormone receptor interactor 6	AF116823|Trip6|22051|thyroid hormone receptor interactor 6	AK010435|Trip6|22051|thyroid hormone receptor interactor 6	NM_011639|Trip6|22051|thyroid hormone receptor interactor 6	AK166024|Trip6|22051|thyroid hormone receptor interactor 6
mm9_v1_chr18_+_4375583_4375596	1.03465	BPTF.p2	AK011546|Mtpap|67440|mitochondrial poly(A) polymerase	AK036760|Mtpap|67440|mitochondrial poly(A) polymerase	NM_026157|Mtpap|67440|mitochondrial poly(A) polymerase	AK154747|Mtpap|67440|mitochondrial poly(A) polymerase	AK166038|Mtpap|67440|mitochondrial poly(A) polymerase
mm9_v1_chr11_+_40547143_40547199	1.03355	BPTF.p2	NM_026023|Nudcd2|52653|NudC domain containing 2	AK133774|Nudcd2|52653|NudC domain containing 2	AK005909|Nudcd2|52653|NudC domain containing 2	AK004388|Nudcd2|52653|NudC domain containing 2
mm9_v1_chr9_-_65239349_65239458	1.03306	BPTF.p2	AK048611|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	BC139793|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	NM_028974|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13
mm9_v1_chr2_+_84649645_84649692	1.03215	BPTF.p2	AK206200|Ube2l6|56791|ubiquitin-conjugating enzyme E2L 6
mm9_v1_chr7_+_95426585_95426756	1.03209	BPTF.p2	AK146858|Ctsc|13032|cathepsin C	NM_009982|Ctsc|13032|cathepsin C	AK150761|Ctsc|13032|cathepsin C	AK151711|Ctsc|13032|cathepsin C	AK153168|Ctsc|13032|cathepsin C	AK002454|Ctsc|13032|cathepsin C	AK049406|Ctsc|13032|cathepsin C	AK167882|Ctsc|13032|cathepsin C	U89269|Ctsc|13032|cathepsin C	U74683|Ctsc|13032|cathepsin C	AK151388|Ctsc|13032|cathepsin C	AK152524|Ctsc|13032|cathepsin C	BC067063|Ctsc|13032|cathepsin C	AK151861|Ctsc|13032|cathepsin C
mm9_v1_chr10_+_19076344_19076344	1.02861	BPTF.p2	NM_053008|Olig3|94222|oligodendrocyte transcription factor 3
mm9_v1_chr10_-_106931783_106931851	1.02833	BPTF.p2	BC119209|Myf6|17878|myogenic factor 6	BC119211|Myf6|17878|myogenic factor 6	NM_008657|Myf6|17878|myogenic factor 6	X59060|Myf6|17878|myogenic factor 6	AK029370|Myf6|17878|myogenic factor 6
mm9_v1_chr15_-_76500300_76500377	1.02637	BPTF.p2	AF079514|Foxh1|14106|forkhead box H1	AF110506|Foxh1|14106|forkhead box H1	AF177770|Foxh1|14106|forkhead box H1	AB221574|Foxh1|14106|forkhead box H1	AF069303|Foxh1|14106|forkhead box H1	NM_007989|Foxh1|14106|forkhead box H1	BC119156|Foxh1|14106|forkhead box H1	BC137781|Foxh1|14106|forkhead box H1
mm9_v1_chr5_+_93696645_93696792	1.02631	BPTF.p2	BC060180|Ccng2|12452|cyclin G2	BC088980|Ccng2|12452|cyclin G2
mm9_v1_chr3_-_106022381_106022396	1.02457	BPTF.p2	AY049765|Chi3l4|104183|chitinase 3-like 4	AY065557|Chi3l4|104183|chitinase 3-like 4	BC130015|Chi3l4|104183|chitinase 3-like 4	AK131914|Chi3l4|104183|chitinase 3-like 4	NM_145126|Chi3l4|104183|chitinase 3-like 4
mm9_v1_chr13_-_55637866_55638018	1.02293	BPTF.p2	BC011308|Ddx41|72935|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	BC023711|Ddx41|72935|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	AK156957|Ddx41|72935|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	AK168043|Ddx41|72935|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	AK151427|Ddx41|72935|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	AK013586|Ddx41|72935|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	NM_134059|Ddx41|72935|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
mm9_v1_chr18_-_39650291_39650365	1.02289	BPTF.p2	BC016462|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	AK155200|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr5_-_36071673_36071684	1.02217	BPTF.p2	AK171242|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1	AK155330|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1	AK171209|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1
mm9_v1_chr4_-_91042997_91043190	1.02192	BPTF.p2	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr12_+_74224693_74224793	1.02102	BPTF.p2	AK048499|Mnat1|17420|menage a trois 1	AK155859|Mnat1|17420|menage a trois 1	NM_008612|Mnat1|17420|menage a trois 1	AK008249|Mnat1|17420|menage a trois 1	BC089023|Mnat1|17420|menage a trois 1	BC115630|Mnat1|17420|menage a trois 1	BC115631|Mnat1|17420|menage a trois 1	AK157721|Mnat1|17420|menage a trois 1	AK008134|Mnat1|17420|menage a trois 1	AK053621|Mnat1|17420|menage a trois 1	AK011833|Mnat1|17420|menage a trois 1	AK029174|Mnat1|17420|menage a trois 1
mm9_v1_chr4_+_128365981_128366038	1.02019	BPTF.p2	NM_018774|Phc2|54383|polyhomeotic-like 2 (Drosophila)	BC057571|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chr10_-_53350244_53350244	1.01996	BPTF.p2	NM_027830|Mcm9|71567|minichromosome maintenance complex component 9
mm9_v1_chr5_+_137462888_137462891	1.01982	BPTF.p2	BC054734|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	NM_011962|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	BC043047|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr5_-_94100392_94100534	1.01874	BPTF.p2	BC085232|C87414|381654|expressed sequence C87414	AK163343|C87414|381654|expressed sequence C87414	NM_001164284|C87414|381654|expressed sequence C87414	NM_001164285|C87414|381654|expressed sequence C87414	AK139835|C87414|381654|expressed sequence C87414
mm9_v1_chr4_+_151699834_151699937	1.01634	BPTF.p2	BC096390|Rpl22|19934|ribosomal protein L22
mm9_v1_chr5_-_5265981_5266073	1.01621	BPTF.p2	AK083269|Cdk14|18647|cyclin-dependent kinase 14	AK139386|Cdk14|18647|cyclin-dependent kinase 14	BC068134|Cdk14|18647|cyclin-dependent kinase 14	AK138437|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr8_+_87607186_87607233	1.0161	BPTF.p2	AK004817|Man2b1|17159|mannosidase 2, alpha B1	AK088826|Man2b1|17159|mannosidase 2, alpha B1	AK171166|Man2b1|17159|mannosidase 2, alpha B1	AK147928|Man2b1|17159|mannosidase 2, alpha B1	AK035551|Man2b1|17159|mannosidase 2, alpha B1	U29947|Man2b1|17159|mannosidase 2, alpha B1	BC005430|Man2b1|17159|mannosidase 2, alpha B1	U87240|Man2b1|17159|mannosidase 2, alpha B1
mm9_v1_chr11_-_40562196_40562300	1.01503	BPTF.p2	
mm9_v1_chr13_-_64190493_64190508	1.01477	BPTF.p2	U66827|Hsd17b3|15487|hydroxysteroid (17-beta) dehydrogenase 3	NM_008291|Hsd17b3|15487|hydroxysteroid (17-beta) dehydrogenase 3
mm9_v1_chr4_-_147016606_147016616	1.0147	BPTF.p2	BC058858|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene	NM_145078|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene
mm9_v1_chr15_+_80541675_80541764	1.01143	BPTF.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr8_+_87607167_87607182	1.01097	BPTF.p2	NM_010764|Man2b1|17159|mannosidase 2, alpha B1	AK169830|Man2b1|17159|mannosidase 2, alpha B1
mm9_v1_chr18_-_10029925_10030160	1.00785	BPTF.p2	AB034633|Usp14|59025|ubiquitin specific peptidase 14	BC050197|Usp14|59025|ubiquitin specific peptidase 14	AK045909|Usp14|59025|ubiquitin specific peptidase 14	BC005571|Usp14|59025|ubiquitin specific peptidase 14	AK029977|Usp14|59025|ubiquitin specific peptidase 14	AK160215|Usp14|59025|ubiquitin specific peptidase 14	AK011322|Usp14|59025|ubiquitin specific peptidase 14	AK172477|Usp14|59025|ubiquitin specific peptidase 14	AK170933|Usp14|59025|ubiquitin specific peptidase 14	NM_001038589|Usp14|59025|ubiquitin specific peptidase 14	NM_021522|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr9_+_62686569_62686663	1.00774	BPTF.p2	AK154414|Cln6|76524|ceroid-lipofuscinosis, neuronal 6	NM_001033175|Cln6|76524|ceroid-lipofuscinosis, neuronal 6	AK154551|Cln6|76524|ceroid-lipofuscinosis, neuronal 6
mm9_v1_chr6_-_99385338_99385338	1.00671	BPTF.p2	NM_053202|Foxp1|108655|forkhead box P1
mm9_v1_chr5_-_123183255_123183351	1.00509	BPTF.p2	AK050846|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr9_-_75407338_75407491	1.00385	BPTF.p2	AF237630|Tmod3|50875|tropomodulin 3	AF177172|Tmod3|50875|tropomodulin 3	BC082595|Tmod3|50875|tropomodulin 3	AK167723|Tmod3|50875|tropomodulin 3	AK017725|Tmod3|50875|tropomodulin 3	AK050372|Tmod3|50875|tropomodulin 3	AK082971|Tmod3|50875|tropomodulin 3	AK147017|Tmod3|50875|tropomodulin 3	AK169218|Tmod3|50875|tropomodulin 3	NM_016963|Tmod3|50875|tropomodulin 3
mm9_v1_chr4_-_86314560_86314608	1.00316	BPTF.p2	AK179029|Plin2|11520|perilipin 2	AY035850|Plin2|11520|perilipin 2	AY035851|Plin2|11520|perilipin 2
mm9_v1_chr6_-_87759747_87759783	1.00092	BPTF.p2	NM_133717|Rab43|69834|RAB43, member RAS oncogene family	BC010248|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr11_+_60541880_60542010	0.998661	BPTF.p2	NM_001009927|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK156917|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK171444|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	BC088984|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)
mm9_v1_chr10_-_80129720_80129733	0.997416	BPTF.p2	BC013844|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr11_-_17111582_17111598	0.997032	BPTF.p2	AK146152|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK168177|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	NM_025443|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)
mm9_v1_chr8_+_112302530_112302620	0.996619	BPTF.p2	AK036387|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	NM_009677|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	X54424|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	AK145821|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC052703|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC054535|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit
mm9_v1_chr14_-_73762324_73762328	0.995182	BPTF.p2	AK010248|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr6_-_119367498_119367553	0.994901	BPTF.p2	BC064109|Adipor2|68465|adiponectin receptor 2	AY424291|Adipor2|68465|adiponectin receptor 2	BC024094|Adipor2|68465|adiponectin receptor 2	NM_197985|Adipor2|68465|adiponectin receptor 2	AK046591|Adipor2|68465|adiponectin receptor 2	AK134787|Adipor2|68465|adiponectin receptor 2	AK160534|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr15_-_72929166_72929248	0.991691	BPTF.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chrX_-_71598873_71598966	0.991552	BPTF.p2	AK134624|Lage3|66192|L antigen family, member 3	BC027305|Lage3|66192|L antigen family, member 3	AK004210|Lage3|66192|L antigen family, member 3	AK002539|Lage3|66192|L antigen family, member 3	NM_025410|Lage3|66192|L antigen family, member 3
mm9_v1_chr2_+_43410844_43410873	0.99028	BPTF.p2	AK014484|Kynu|70789|kynureninase (L-kynurenine hydrolase)	AK050024|Kynu|70789|kynureninase (L-kynurenine hydrolase)	NM_027552|Kynu|70789|kynureninase (L-kynurenine hydrolase)	BC069848|Kynu|70789|kynureninase (L-kynurenine hydrolase)	AK040584|Kynu|70789|kynureninase (L-kynurenine hydrolase)	BC026950|Kynu|70789|kynureninase (L-kynurenine hydrolase)
mm9_v1_chr19_-_4333914_4333961	0.989948	BPTF.p2	
mm9_v1_chr9_-_70504934_70505009	0.988214	BPTF.p2	BC058683|Fam63b|235461|family with sequence similarity 63, member B	AK046623|Fam63b|235461|family with sequence similarity 63, member B	BC049357|Fam63b|235461|family with sequence similarity 63, member B	AK046403|Fam63b|235461|family with sequence similarity 63, member B	AK035930|Fam63b|235461|family with sequence similarity 63, member B	NM_172772|Fam63b|235461|family with sequence similarity 63, member B	AK220158|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr8_-_80960532_80960550	0.988057	BPTF.p2	S68377|Pou4f2|18997|POU domain, class 4, transcription factor 2	AK084240|Pou4f2|18997|POU domain, class 4, transcription factor 2	AK087546|Pou4f2|18997|POU domain, class 4, transcription factor 2	NM_138944|Pou4f2|18997|POU domain, class 4, transcription factor 2
mm9_v1_chr16_+_25802001_25802145	0.987278	BPTF.p2	AK048623|Trp63|22061|transformation related protein 63	BC092537|Trp63|22061|transformation related protein 63	NM_001127262|Trp63|22061|transformation related protein 63	NM_001127263|Trp63|22061|transformation related protein 63	NM_001127264|Trp63|22061|transformation related protein 63	NM_001127265|Trp63|22061|transformation related protein 63	NM_011641|Trp63|22061|transformation related protein 63	AK137253|Trp63|22061|transformation related protein 63	BC090649|Trp63|22061|transformation related protein 63	AB010152|Trp63|22061|transformation related protein 63	AF075437|Trp63|22061|transformation related protein 63	AF075438|Trp63|22061|transformation related protein 63	AF075439|Trp63|22061|transformation related protein 63
mm9_v1_chr3_-_107877121_107877254	0.984728	BPTF.p2	AK196006|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr1_+_17591981_17592085	0.981682	BPTF.p2	AK030960|Pi15|94227|peptidase inhibitor 15	NM_053191|Pi15|94227|peptidase inhibitor 15	AK040961|Pi15|94227|peptidase inhibitor 15	AF329196|Pi15|94227|peptidase inhibitor 15	BC116705|Pi15|94227|peptidase inhibitor 15
mm9_v1_chr5_-_136174262_136174403	0.98129	BPTF.p2	
mm9_v1_chr16_+_31933936_31933994	0.981078	BPTF.p2	NM_172822|Pigz|239827|phosphatidylinositol glycan anchor biosynthesis, class Z
mm9_v1_chr5_+_104183216_104183347	0.980629	BPTF.p2	AF074266|Aff1|17355|AF4/FMR2 family, member 1	AY749168|Aff1|17355|AF4/FMR2 family, member 1	BC131665|Aff1|17355|AF4/FMR2 family, member 1
mm9_v1_chr15_-_102181072_102181189	0.979378	BPTF.p2	AK134406|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK034591|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	BC018191|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK083401|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK166118|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK165243|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK088247|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK083537|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK079849|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	BC025501|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK169523|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	AK087134|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia	NM_153416|Aaas|223921|achalasia, adrenocortical insufficiency, alacrimia
mm9_v1_chr15_+_6395311_6395349	0.979313	BPTF.p2	BC011137|C9|12279|complement component 9	NM_013485|C9|12279|complement component 9
mm9_v1_chr11_-_97627829_97627926	0.978951	BPTF.p2	BC021478|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	BC079553|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK030628|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK035158|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK004983|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK017849|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	NM_026186|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
mm9_v1_chr2_+_158450623_158450686	0.97815	BPTF.p2	AK046312|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK142980|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	NM_175419|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK046584|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC028806|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC052039|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC037522|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)
mm9_v1_chr15_-_98661877_98661941	0.977853	BPTF.p2	AK159583|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	BC086660|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	AK138324|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	AF036535|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	NM_016781|Prkag1|19082|protein kinase, AMP-activated, gamma 1 non-catalytic subunit
mm9_v1_chr6_-_67326042_67326130	0.973054	BPTF.p2	BC137745|Il12rb2|16162|interleukin 12 receptor, beta 2	NM_008354|Il12rb2|16162|interleukin 12 receptor, beta 2	U64199|Il12rb2|16162|interleukin 12 receptor, beta 2
mm9_v1_chr7_-_53965879_53966065	0.972924	BPTF.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr3_+_96025040_96025063	0.971522	BPTF.p2	AK090189|Hist2h2be|319190|histone cluster 2, H2be	AK143398|Hist2h2be|319190|histone cluster 2, H2be	AK162494|Hist2h2be|319190|histone cluster 2, H2be	AK167546|Hist2h2be|319190|histone cluster 2, H2be	AK170749|Hist2h2be|319190|histone cluster 2, H2be	BC058562|Hist2h2be|319190|histone cluster 2, H2be	AK078533|Hist2h2be|319190|histone cluster 2, H2be	NM_178214|Hist2h2be|319190|histone cluster 2, H2be	AK168767|Hist2h2be|319190|histone cluster 2, H2be	BC047137|Hist2h2be|319190|histone cluster 2, H2be
mm9_v1_chr8_-_113521671_113521714	0.971009	BPTF.p2	AK146548|Ddx19a|13680|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a	AK049467|Ddx19a|13680|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a	BC011270|Ddx19a|13680|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a	L25125|Ddx19a|13680|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
mm9_v1_chr5_-_4104696_4104696	0.97061	BPTF.p2	NM_020010|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr15_-_103045710_103045798	0.970077	BPTF.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr10_-_26095736_26095813	0.969886	BPTF.p2	BC082309|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK031398|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr2_-_152169650_152169795	0.969071	BPTF.p2	AK146421|Trib3|228775|tribbles homolog 3 (Drosophila)	AK089931|Trib3|228775|tribbles homolog 3 (Drosophila)	AK144752|Trib3|228775|tribbles homolog 3 (Drosophila)	AJ514260|Trib3|228775|tribbles homolog 3 (Drosophila)	AK146340|Trib3|228775|tribbles homolog 3 (Drosophila)	AK132257|Trib3|228775|tribbles homolog 3 (Drosophila)	AK159760|Trib3|228775|tribbles homolog 3 (Drosophila)	AF358868|Trib3|228775|tribbles homolog 3 (Drosophila)	BC012955|Trib3|228775|tribbles homolog 3 (Drosophila)	AK160099|Trib3|228775|tribbles homolog 3 (Drosophila)	NM_175093|Trib3|228775|tribbles homolog 3 (Drosophila)
mm9_v1_chr4_+_146125090_146125090	0.968894	BPTF.p2	BC108352|Zfp600|667666|zinc finger protein 600	NM_001177545|Zfp600|667666|zinc finger protein 600
mm9_v1_chr11_-_102546084_102546176	0.968611	BPTF.p2	
mm9_v1_chr5_-_104450856_104450959	0.967098	BPTF.p2	AK049355|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr8_-_73046985_73047078	0.967029	BPTF.p2	AK155003|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK013135|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK002695|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC048938|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC053944|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	NM_029366|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene
mm9_v1_chr6_-_51416921_51416984	0.966629	BPTF.p2	BC059107|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr13_-_38069696_38069810	0.966489	BPTF.p2	
mm9_v1_chr14_-_21299119_21299187	0.965812	BPTF.p2	AK032013|Anxa7|11750|annexin A7	AK169199|Anxa7|11750|annexin A7	AK167588|Anxa7|11750|annexin A7	BC008997|Anxa7|11750|annexin A7	AK149654|Anxa7|11750|annexin A7	AK077579|Anxa7|11750|annexin A7	AK041855|Anxa7|11750|annexin A7	AK151438|Anxa7|11750|annexin A7	AK161613|Anxa7|11750|annexin A7	AK134589|Anxa7|11750|annexin A7
mm9_v1_chr4_-_132288428_132288460	0.965456	BPTF.p2	AK029920|Xkr8|381560|X Kell blood group precursor related family member 8 homolog	AY534254|Xkr8|381560|X Kell blood group precursor related family member 8 homolog	NM_201368|Xkr8|381560|X Kell blood group precursor related family member 8 homolog
mm9_v1_chr11_+_80196766_80196898	0.964477	BPTF.p2	AK087885|Zfp207|22680|zinc finger protein 207	NM_001130169|Zfp207|22680|zinc finger protein 207	NM_001130170|Zfp207|22680|zinc finger protein 207	NM_001130171|Zfp207|22680|zinc finger protein 207	NM_011751|Zfp207|22680|zinc finger protein 207	AK140139|Zfp207|22680|zinc finger protein 207	AK146787|Zfp207|22680|zinc finger protein 207	AK159683|Zfp207|22680|zinc finger protein 207	AK033497|Zfp207|22680|zinc finger protein 207	BC003715|Zfp207|22680|zinc finger protein 207	AB013357|Zfp207|22680|zinc finger protein 207	AB032196|Zfp207|22680|zinc finger protein 207
mm9_v1_chr1_-_80661844_80661858	0.963602	BPTF.p2	BC150753|Dock10|210293|dedicator of cytokinesis 10
mm9_v1_chr11_-_100334035_100334069	0.963475	BPTF.p2	AK169910|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr15_-_98711692_98711844	0.963332	BPTF.p2	AK007708|Rhebl1|69159|Ras homolog enriched in brain like 1	BC016521|Rhebl1|69159|Ras homolog enriched in brain like 1	AK135858|Rhebl1|69159|Ras homolog enriched in brain like 1	AY327413|Rhebl1|69159|Ras homolog enriched in brain like 1	NM_026967|Rhebl1|69159|Ras homolog enriched in brain like 1
mm9_v1_chr1_+_133535033_133535043	0.963304	BPTF.p2	AK145875|Ctse|13034|cathepsin E
mm9_v1_chr10_-_115922360_115922443	0.962742	BPTF.p2	AK019295|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr12_-_102146390_102146407	0.961808	BPTF.p2	AK087410|Gpr68|238377|G protein-coupled receptor 68	NM_001177673|Gpr68|238377|G protein-coupled receptor 68	NM_175493|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr10_+_98486068_98486102	0.960808	BPTF.p2	AK136761|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr8_+_87470889_87470889	0.95985	BPTF.p2	AY527275|Rtbdn|234542|retbindin	AY527276|Rtbdn|234542|retbindin	NM_144929|Rtbdn|234542|retbindin
mm9_v1_chr17_-_57013869_57013869	0.958978	BPTF.p2	DQ250679|Acsbg2|328845|acyl-CoA synthetase bubblegum family member 2	NM_001039114|Acsbg2|328845|acyl-CoA synthetase bubblegum family member 2
mm9_v1_chr14_+_61351770_61351875	0.958475	BPTF.p2	AK151394|Spata13|219140|spermatogenesis associated 13
mm9_v1_chr1_-_34490108_34490136	0.957895	BPTF.p2	
mm9_v1_chr3_+_102799653_102799657	0.957737	BPTF.p2	AK014247|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr18_+_75527015_75527182	0.956866	BPTF.p2	NM_001042660|Smad7|17131|MAD homolog 7 (Drosophila)	AK013237|Smad7|17131|MAD homolog 7 (Drosophila)	AJ000550|Smad7|17131|MAD homolog 7 (Drosophila)
mm9_v1_chr16_+_22951183_22951214	0.956545	BPTF.p2	AY135662|Hrg|94175|histidine-rich glycoprotein	AB055897|Hrg|94175|histidine-rich glycoprotein	BC011168|Hrg|94175|histidine-rich glycoprotein	AF194028|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chr3_-_95558736_95558899	0.955437	BPTF.p2	AK187935|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164825|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK088675|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC147501|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK011540|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC008995|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK168075|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK142685|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK080690|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164589|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163617|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163618|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163619|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_027931|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr19_-_41068625_41068698	0.954146	BPTF.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr2_-_121944008_121944031	0.953261	BPTF.p2	AK049617|Spg11|214585|spastic paraplegia 11
mm9_v1_chr1_-_64167952_64168022	0.953086	BPTF.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr13_-_23557675_23557769	0.953025	BPTF.p2	AK142596|Btn1a1|12231|butyrophilin, subfamily 1, member A1	BC011497|Btn1a1|12231|butyrophilin, subfamily 1, member A1	BC009817|Btn1a1|12231|butyrophilin, subfamily 1, member A1	AK021333|Btn1a1|12231|butyrophilin, subfamily 1, member A1	AK145168|Btn1a1|12231|butyrophilin, subfamily 1, member A1	NM_013483|Btn1a1|12231|butyrophilin, subfamily 1, member A1
mm9_v1_chr5_-_36071698_36071756	0.952737	BPTF.p2	AK150064|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1	AK159089|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1	AK170396|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1	AK170383|Sh3tc1|231147|SH3 domain and tetratricopeptide repeats 1
mm9_v1_chr8_-_108223598_108223720	0.95206	BPTF.p2	BC004682|Acd|497652|adrenocortical dysplasia
mm9_v1_chr4_-_134323845_134323948	0.951791	BPTF.p2	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chr14_+_61757271_61757327	0.951183	BPTF.p2	AK160797|Sacs|50720|sacsin	NM_172809|Sacs|50720|sacsin	AK046501|Sacs|50720|sacsin
mm9_v1_chr5_+_135845811_135845865	0.950598	BPTF.p2	AK079400|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	NM_145414|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK156651|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AF412029|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK149521|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5
mm9_v1_chr7_+_19303438_19303538	0.949288	BPTF.p2	BC080694|Psg22|243862|pregnancy-specific glycoprotein 22	NM_001004152|Psg22|243862|pregnancy-specific glycoprotein 22	BC050099|Psg22|243862|pregnancy-specific glycoprotein 22
mm9_v1_chr1_-_120207674_120207826	0.947337	BPTF.p2	AK181409|Tsn|22099|translin	AK183078|Tsn|22099|translin	AK184665|Tsn|22099|translin	AK189586|Tsn|22099|translin	AK198107|Tsn|22099|translin	AK199692|Tsn|22099|translin	AK202525|Tsn|22099|translin	AK010737|Tsn|22099|translin	AF234179|Tsn|22099|translin	NM_011650|Tsn|22099|translin	X81464|Tsn|22099|translin	BC004615|Tsn|22099|translin	AK165598|Tsn|22099|translin	AK011220|Tsn|22099|translin	AK150529|Tsn|22099|translin	AK151448|Tsn|22099|translin
mm9_v1_chr16_-_10993155_10993281	0.947325	BPTF.p2	AK159533|Litaf|56722|LPS-induced TN factor	AF171100|Litaf|56722|LPS-induced TN factor	BC018559|Litaf|56722|LPS-induced TN factor	AK018578|Litaf|56722|LPS-induced TN factor	AK078708|Litaf|56722|LPS-induced TN factor	AK151053|Litaf|56722|LPS-induced TN factor	NM_019980|Litaf|56722|LPS-induced TN factor	AK076162|Litaf|56722|LPS-induced TN factor
mm9_v1_chr4_-_148511650_148511708	0.946477	BPTF.p2	BC138926|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC138927|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK011725|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC048521|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK012995|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK013038|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	NM_027263|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1
mm9_v1_chr3_+_37319188_37319238	0.945851	BPTF.p2	NM_001163511|Spata5|57815|spermatogenesis associated 5	NM_021343|Spata5|57815|spermatogenesis associated 5	AF049099|Spata5|57815|spermatogenesis associated 5	BC145302|Spata5|57815|spermatogenesis associated 5	BC145309|Spata5|57815|spermatogenesis associated 5	AK011111|Spata5|57815|spermatogenesis associated 5
mm9_v1_chr5_+_31599923_31600004	0.944942	BPTF.p2	AK149377|Gckr|231103|glucokinase regulatory protein	BC012412|Gckr|231103|glucokinase regulatory protein	NM_144909|Gckr|231103|glucokinase regulatory protein
mm9_v1_chr11_-_116712559_116712636	0.944868	BPTF.p2	AF250133|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr5_-_124482223_124482295	0.944004	BPTF.p2	AK082658|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK172114|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK172337|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK149893|Vps37b|330192|vacuolar protein sorting 37B (yeast)	AK166359|Vps37b|330192|vacuolar protein sorting 37B (yeast)	BC026744|Vps37b|330192|vacuolar protein sorting 37B (yeast)	NM_177876|Vps37b|330192|vacuolar protein sorting 37B (yeast)
mm9_v1_chr10_+_79620689_79620701	0.943748	BPTF.p2	AK013865|Midn|59090|midnolin
mm9_v1_chr6_+_83106466_83106494	0.943624	BPTF.p2	BC126949|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene
mm9_v1_chr7_+_17491838_17491885	0.943608	BPTF.p2	AK033567|Ptgir|19222|prostaglandin I receptor (IP)	NM_008967|Ptgir|19222|prostaglandin I receptor (IP)	D26157|Ptgir|19222|prostaglandin I receptor (IP)	BC094386|Ptgir|19222|prostaglandin I receptor (IP)	AK154272|Ptgir|19222|prostaglandin I receptor (IP)
mm9_v1_chr14_+_52913867_52913879	0.941709	BPTF.p2	AK207275|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chr5_-_92776027_92776042	0.940839	BPTF.p2	AK150987|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr15_-_79723549_79723567	0.938816	BPTF.p2	AK143849|D730005E14Rik|109361|RIKEN cDNA D730005E14 gene	AK035732|D730005E14Rik|109361|RIKEN cDNA D730005E14 gene
mm9_v1_chr11_-_98010872_98010958	0.937253	BPTF.p2	AK220232|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK161566|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK144786|Fbxl20|72194|F-box and leucine-rich repeat protein 20	NM_028149|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK012109|Fbxl20|72194|F-box and leucine-rich repeat protein 20
mm9_v1_chr14_+_73637697_73637874	0.936899	BPTF.p2	NM_175116|Lpar6|67168|lysophosphatidic acid receptor 6	AK032901|Lpar6|67168|lysophosphatidic acid receptor 6	AK011967|Lpar6|67168|lysophosphatidic acid receptor 6	AK169602|Lpar6|67168|lysophosphatidic acid receptor 6	BC047931|Lpar6|67168|lysophosphatidic acid receptor 6	AK008952|Lpar6|67168|lysophosphatidic acid receptor 6	BC057175|Lpar6|67168|lysophosphatidic acid receptor 6	BC069991|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr12_-_12948513_12948641	0.936504	BPTF.p2	BC005453|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK144126|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146913|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK146696|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_008709|Mycn|18109|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm9_v1_chr4_-_94223435_94223491	0.934584	BPTF.p2	AK046647|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK076487|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK013385|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK032696|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	BC020067|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK150311|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK140382|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK171141|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK160297|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK160572|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	NM_026368|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene
mm9_v1_chr13_-_108516475_108516490	0.934491	BPTF.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr9_-_70351160_70351184	0.933324	BPTF.p2	BC069835|Rnf111|93836|ring finger 111	AK169999|Rnf111|93836|ring finger 111
mm9_v1_chr19_+_7568529_7568529	0.933036	BPTF.p2	NM_001163505|Atl3|109168|atlastin GTPase 3
mm9_v1_chr16_-_22811458_22811482	0.932601	BPTF.p2	BC056452|Crygs|12970|crystallin, gamma S	AF032995|Crygs|12970|crystallin, gamma S	AK143060|Crygs|12970|crystallin, gamma S	NM_009967|Crygs|12970|crystallin, gamma S
mm9_v1_chr5_-_143987485_143987560	0.932059	BPTF.p2	AY820308|Spdyb|74673|speedy homolog B (Xenopus laevis)	AK015441|Spdyb|74673|speedy homolog B (Xenopus laevis)	NM_029048|Spdyb|74673|speedy homolog B (Xenopus laevis)
mm9_v1_chr8_-_82235513_82235596	0.931457	BPTF.p2	U90446|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167704|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	BC005422|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK144711|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK133748|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK134738|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK147151|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167370|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167130|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1
mm9_v1_chr7_-_91032695_91032850	0.931453	BPTF.p2	AK162446|Mesdc1|80889|mesoderm development candidate 1	AK084510|Mesdc1|80889|mesoderm development candidate 1	AK089082|Mesdc1|80889|mesoderm development candidate 1	AK036338|Mesdc1|80889|mesoderm development candidate 1	NM_030705|Mesdc1|80889|mesoderm development candidate 1
mm9_v1_chr6_-_6528581_6528672	0.930899	BPTF.p2	U41626|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK135462|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK167914|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC023490|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC058117|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK161690|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	X83589|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK160432|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	NM_009169|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK141911|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1
mm9_v1_chr4_+_33149973_33150101	0.930468	BPTF.p2	AF024621|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	NM_008076|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	BC057957|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
mm9_v1_chr11_+_65620669_65620745	0.928869	BPTF.p2	AK007308|Zkscan6|52712|zinc finger with KRAB and SCAN domains 6	AK015125|Zkscan6|52712|zinc finger with KRAB and SCAN domains 6	BC096688|Zkscan6|52712|zinc finger with KRAB and SCAN domains 6	BC043075|Zkscan6|52712|zinc finger with KRAB and SCAN domains 6	NM_026107|Zkscan6|52712|zinc finger with KRAB and SCAN domains 6
mm9_v1_chr1_-_34899869_34899871	0.928398	BPTF.p2	BC040511|Fam168b|214469|family with sequence similarity 168, member B	BC059247|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr3_+_59885782_59885794	0.927576	BPTF.p2	AF295367|Sucnr1|84112|succinate receptor 1	AK080866|Sucnr1|84112|succinate receptor 1	NM_032400|Sucnr1|84112|succinate receptor 1
mm9_v1_chr2_+_127164374_127164374	0.926297	BPTF.p2	AK033037|Astl|215095|astacin-like metalloendopeptidase (M12 family)	NM_172539|Astl|215095|astacin-like metalloendopeptidase (M12 family)
mm9_v1_chr9_-_85637765_85637765	0.926223	BPTF.p2	NM_001081282|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr12_-_109241423_109241623	0.925862	BPTF.p2	BC019503|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AF186019|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AK088219|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043551|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043553|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043583|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_001079883|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_021399|Bcl11b|58208|B-cell leukemia/lymphoma 11B
mm9_v1_chr6_-_55631085_55631098	0.923692	BPTF.p2	AK144377|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr4_-_117438214_117438270	0.923096	BPTF.p2	BC064748|Klf17|75753|Kruppel-like factor 17	AF508984|Klf17|75753|Kruppel-like factor 17	AK018361|Klf17|75753|Kruppel-like factor 17	AK139827|Klf17|75753|Kruppel-like factor 17	NM_029416|Klf17|75753|Kruppel-like factor 17
mm9_v1_chr15_+_22966203_22966220	0.921192	BPTF.p2	AK082311|Cdh18|320865|cadherin 18	AK137430|Cdh18|320865|cadherin 18	NM_001081299|Cdh18|320865|cadherin 18
mm9_v1_chr10_-_60610238_60610394	0.920462	BPTF.p2	AK036747|Sgpl1|20397|sphingosine phosphate lyase 1	AK150053|Sgpl1|20397|sphingosine phosphate lyase 1	AK173137|Sgpl1|20397|sphingosine phosphate lyase 1	AF036894|Sgpl1|20397|sphingosine phosphate lyase 1	BC026135|Sgpl1|20397|sphingosine phosphate lyase 1	AK037789|Sgpl1|20397|sphingosine phosphate lyase 1	AK043024|Sgpl1|20397|sphingosine phosphate lyase 1	AK049342|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr4_+_141302635_141302765	0.920437	BPTF.p2	AK017155|Agmat|75986|agmatine ureohydrolase (agmatinase)	BC115693|Agmat|75986|agmatine ureohydrolase (agmatinase)
mm9_v1_chr5_+_30969259_30969346	0.919699	BPTF.p2	AF012709|Cenpa|12615|centromere protein A	NM_007681|Cenpa|12615|centromere protein A	AK040313|Cenpa|12615|centromere protein A	AK041138|Cenpa|12615|centromere protein A	AK089033|Cenpa|12615|centromere protein A	AK053763|Cenpa|12615|centromere protein A	AK010718|Cenpa|12615|centromere protein A	BC011038|Cenpa|12615|centromere protein A	AK011399|Cenpa|12615|centromere protein A	BC012280|Cenpa|12615|centromere protein A
mm9_v1_chr4_+_130219255_130219279	0.919645	BPTF.p2	AK162742|Pum1|80912|pumilio 1 (Drosophila)	NM_001159603|Pum1|80912|pumilio 1 (Drosophila)	NM_001159604|Pum1|80912|pumilio 1 (Drosophila)	NM_001159605|Pum1|80912|pumilio 1 (Drosophila)	NM_001159606|Pum1|80912|pumilio 1 (Drosophila)	NM_030722|Pum1|80912|pumilio 1 (Drosophila)	AK141921|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr9_-_22272737_22272810	0.919302	BPTF.p2	BC115549|rp9|55934|retinitis pigmentosa 9 (human)	BC115550|rp9|55934|retinitis pigmentosa 9 (human)	D78255|rp9|55934|retinitis pigmentosa 9 (human)	AK146136|rp9|55934|retinitis pigmentosa 9 (human)	AK168391|rp9|55934|retinitis pigmentosa 9 (human)	NM_018739|rp9|55934|retinitis pigmentosa 9 (human)	AK147912|rp9|55934|retinitis pigmentosa 9 (human)
mm9_v1_chr8_-_109620286_109620323	0.918639	BPTF.p2	AF003000|Terf2|21750|telomeric repeat binding factor 2
mm9_v1_chr11_-_98885428_98885514	0.91782	BPTF.p2	D12513|Top2a|21973|topoisomerase (DNA) II alpha	BC057873|Top2a|21973|topoisomerase (DNA) II alpha	BC008170|Top2a|21973|topoisomerase (DNA) II alpha	NM_011623|Top2a|21973|topoisomerase (DNA) II alpha
mm9_v1_chr1_-_64167818_64167853	0.917312	BPTF.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr10_-_17635007_17635085	0.916678	BPTF.p2	BC094026|Heca|380629|headcase homolog (Drosophila)	AK134782|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr7_-_139978601_139978617	0.915654	BPTF.p2	BC035523|Fam53b|77938|family with sequence similarity 53, member B	AK020830|Fam53b|77938|family with sequence similarity 53, member B	NM_175268|Fam53b|77938|family with sequence similarity 53, member B
mm9_v1_chr7_-_69609363_69609425	0.915248	BPTF.p2	BC138242|Peg12|27412|paternally expressed 12	BC138243|Peg12|27412|paternally expressed 12	AF148857|Peg12|27412|paternally expressed 12	NM_013788|Peg12|27412|paternally expressed 12
mm9_v1_chr3_-_10208480_10208567	0.913774	BPTF.p2	M28726|Fabp4|11770|fatty acid binding protein 4, adipocyte	U96149|Fabp9|21884|fatty acid binding protein 9, testis	CT010390|Fabp4|11770|fatty acid binding protein 4, adipocyte	K02109|Fabp4|11770|fatty acid binding protein 4, adipocyte	BC018558|Fabp4|11770|fatty acid binding protein 4, adipocyte	BC054426|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr11_+_87983066_87983095	0.912557	BPTF.p2	NM_001172099|Cuedc1|103841|CUE domain containing 1	BC131989|Cuedc1|103841|CUE domain containing 1	BC131991|Cuedc1|103841|CUE domain containing 1	BC145206|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr5_-_140797483_140797532	0.910168	BPTF.p2	AK200567|Mad1l1|17120|mitotic arrest deficient 1-like 1	AF083812|Mad1l1|17120|mitotic arrest deficient 1-like 1	AF083813|Mad1l1|17120|mitotic arrest deficient 1-like 1	BC010702|Mad1l1|17120|mitotic arrest deficient 1-like 1	AK136981|Mad1l1|17120|mitotic arrest deficient 1-like 1	NM_010752|Mad1l1|17120|mitotic arrest deficient 1-like 1
mm9_v1_chr15_-_82953171_82953235	0.908395	BPTF.p2	AK036247|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK159553|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK003698|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168850|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK153565|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK032596|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK146821|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168189|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK088456|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	NM_029101|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm9_v1_chr13_-_102462584_102462601	0.907929	BPTF.p2	AK046259|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	NM_001024955|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr19_+_41624128_41624128	0.907671	BPTF.p2	AK041090|Lcor|212391|ligand dependent nuclear receptor corepressor	NM_172154|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr4_-_128483355_128483429	0.906774	BPTF.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chrX_+_98624989_98625073	0.90623	BPTF.p2	NM_023144|Nono|53610|non-POU-domain-containing, octamer binding protein	AK161152|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169303|Nono|53610|non-POU-domain-containing, octamer binding protein	AK145179|Nono|53610|non-POU-domain-containing, octamer binding protein	AK028338|Nono|53610|non-POU-domain-containing, octamer binding protein	AK004830|Nono|53610|non-POU-domain-containing, octamer binding protein	AK169202|Nono|53610|non-POU-domain-containing, octamer binding protein	AK165855|Nono|53610|non-POU-domain-containing, octamer binding protein	BC005465|Nono|53610|non-POU-domain-containing, octamer binding protein	S64860|Nono|53610|non-POU-domain-containing, octamer binding protein	AK167297|Nono|53610|non-POU-domain-containing, octamer binding protein	AK033201|Nono|53610|non-POU-domain-containing, octamer binding protein	AK013444|Nono|53610|non-POU-domain-containing, octamer binding protein
mm9_v1_chr10_+_110601745_110601988	0.906074	BPTF.p2	AK037158|Osbpl8|237542|oxysterol binding protein-like 8	AK050244|Osbpl8|237542|oxysterol binding protein-like 8	NM_001003717|Osbpl8|237542|oxysterol binding protein-like 8	NM_175489|Osbpl8|237542|oxysterol binding protein-like 8
mm9_v1_chr2_-_155937623_155937702	0.905658	BPTF.p2	AK220288|Cpne1|266692|copine I	BC052473|Rbm12|75710|RNA binding motif protein 12	BC057554|Cpne1|266692|copine I	AK035014|Rbm12|75710|RNA binding motif protein 12	AK080772|Rbm12|75710|RNA binding motif protein 12	AF393215|Rbm12|75710|RNA binding motif protein 12	AF393216|Rbm12|75710|RNA binding motif protein 12	AK028882|Cpne1|266692|copine I	AK152323|Cpne1|266692|copine I	NM_029397|Rbm12|75710|RNA binding motif protein 12	NM_170588|Cpne1|266692|copine I	NM_170590|Cpne1|266692|copine I	NM_170598|Rbm12|75710|RNA binding motif protein 12
mm9_v1_chr2_-_84567424_84567451	0.904095	BPTF.p2	BC003237|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	NM_133840|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK053169|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK169709|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chr7_-_31663109_31663149	0.903749	BPTF.p2	AF102134|Cd22|12483|CD22 antigen	AF115400|Cd22|12483|CD22 antigen	AF115401|Cd22|12483|CD22 antigen	AK171589|Cd22|12483|CD22 antigen
mm9_v1_chr1_+_92499999_92500134	0.901712	BPTF.p2	NM_133805|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	BC021488|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK142989|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK079522|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	BC024421|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK079111|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK162502|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK090013|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK145899|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK088323|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm9_v1_chr2_+_13501725_13501846	0.901704	BPTF.p2	AK205443|Vim|22352|vimentin
mm9_v1_chr17_-_33918501_33918527	0.900213	BPTF.p2	AK014564|Angptl4|57875|angiopoietin-like 4	NM_020581|Angptl4|57875|angiopoietin-like 4
mm9_v1_chr4_+_107040388_107040388	0.898832	BPTF.p2	AK144734|Tmem48|72787|transmembrane protein 48	NM_028355|Tmem48|72787|transmembrane protein 48
mm9_v1_chr6_+_124654080_124654110	0.898627	BPTF.p2	AK194975|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3
mm9_v1_chr10_-_80827546_80827600	0.897985	BPTF.p2	AK008872|4930404N11Rik|432479|RIKEN cDNA 4930404N11 gene
mm9_v1_chr11_-_69619087_69619125	0.897821	BPTF.p2	BC144871|Tmem102|380705|transmembrane protein 102	AK143262|Tmem102|380705|transmembrane protein 102	NM_001033433|Tmem102|380705|transmembrane protein 102
mm9_v1_chr17_-_81464406_81464435	0.897806	BPTF.p2	AK012806|Thumpd2|72167|THUMP domain containing 2	NM_028138|Thumpd2|72167|THUMP domain containing 2
mm9_v1_chr5_-_21290925_21290949	0.89613	BPTF.p2	U53208|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161347|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr16_+_43890014_43890036	0.895884	BPTF.p2	NM_027801|2610015P09Rik|212153|RIKEN cDNA 2610015P09 gene
mm9_v1_chr10_-_39971060_39971064	0.895602	BPTF.p2	AK185766|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr4_-_131978279_131978374	0.89518	BPTF.p2	BC096033|Phactr4|100169|phosphatase and actin regulator 4	AK049209|Phactr4|100169|phosphatase and actin regulator 4	BC075672|Phactr4|100169|phosphatase and actin regulator 4	AK220496|Phactr4|100169|phosphatase and actin regulator 4	NM_001161797|Phactr4|100169|phosphatase and actin regulator 4	NM_175306|Phactr4|100169|phosphatase and actin regulator 4
mm9_v1_chr9_-_14545164_14545176	0.895089	BPTF.p2	AB258534|Piwil4|330890|piwi-like homolog 4 (Drosophila)	NM_177905|Piwil4|330890|piwi-like homolog 4 (Drosophila)
mm9_v1_chr19_+_5647822_5648036	0.894195	BPTF.p2	AK202240|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK203832|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chrX_-_159267249_159267385	0.893595	BPTF.p2	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr16_-_19983049_19983121	0.893255	BPTF.p2	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr14_+_45970767_45970937	0.889452	BPTF.p2	AK154136|Styx|56291|serine/threonine/tyrosine interaction protein	AK030122|Styx|56291|serine/threonine/tyrosine interaction protein	BC096674|Styx|56291|serine/threonine/tyrosine interaction protein	NM_019637|Styx|56291|serine/threonine/tyrosine interaction protein	AK166043|Styx|56291|serine/threonine/tyrosine interaction protein	AK046970|Styx|56291|serine/threonine/tyrosine interaction protein	AK042741|Styx|56291|serine/threonine/tyrosine interaction protein	U34973|Styx|56291|serine/threonine/tyrosine interaction protein	BC038608|Styx|56291|serine/threonine/tyrosine interaction protein	BC085089|Styx|56291|serine/threonine/tyrosine interaction protein	AK002822|Styx|56291|serine/threonine/tyrosine interaction protein
mm9_v1_chr8_-_113521722_113521757	0.889262	BPTF.p2	NM_007916|Ddx19a|13680|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
mm9_v1_chr8_+_112741857_112741896	0.889238	BPTF.p2	NM_146215|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	AK158368|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	AK032855|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	AK050315|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	BC025546|Ftsjd1|234728|FtsJ methyltransferase domain containing 1
mm9_v1_chr18_+_14864659_14864697	0.888116	BPTF.p2	AK010717|Psma8|73677|proteasome (prosome, macropain) subunit, alpha type, 8	NM_001163609|Psma8|73677|proteasome (prosome, macropain) subunit, alpha type, 8	BC116990|Psma8|73677|proteasome (prosome, macropain) subunit, alpha type, 8	BC116992|Psma8|73677|proteasome (prosome, macropain) subunit, alpha type, 8	BC144771|Psma8|73677|proteasome (prosome, macropain) subunit, alpha type, 8	BC144772|Psma8|73677|proteasome (prosome, macropain) subunit, alpha type, 8
mm9_v1_chr7_+_134380580_134380598	0.887951	BPTF.p2	AK218462|Zfp553|233887|zinc finger protein 553
mm9_v1_chr13_+_27213566_27213578	0.886009	BPTF.p2	BC064735|Prl3d2|215028|prolactin family 3, subfamily d, member 1	AF525160|Prl3d2|215028|prolactin family 3, subfamily d, member 1	NM_172155|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119340|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119344|Prl3d2|215028|prolactin family 3, subfamily d, member 1
mm9_v1_chr4_-_14753526_14753603	0.883569	BPTF.p2	BC087552|Otud6b|72201|OTU domain containing 6B	AK172229|Otud6b|72201|OTU domain containing 6B	AK172338|Otud6b|72201|OTU domain containing 6B	BC031474|Otud6b|72201|OTU domain containing 6B	AK011203|Otud6b|72201|OTU domain containing 6B	AK169134|Otud6b|72201|OTU domain containing 6B	AK166546|Otud6b|72201|OTU domain containing 6B	AK144761|Otud6b|72201|OTU domain containing 6B	AK166445|Otud6b|72201|OTU domain containing 6B	AK155761|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr17_-_44951745_44951745	0.882658	BPTF.p2	DQ458792|Runx2|12393|runt related transcription factor 2	NM_001146038|Runx2|12393|runt related transcription factor 2	NM_009820|Runx2|12393|runt related transcription factor 2
mm9_v1_chr16_+_21794392_21794464	0.882187	BPTF.p2	AK004850|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene	AK005305|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene	AK031500|1300002E11Rik|100043489|RIKEN cDNA 1300002E11 gene
mm9_v1_chr3_+_66789587_66789619	0.881234	BPTF.p2	AK012100|Rsrc1|66880|arginine/serine-rich coiled-coil 1	NM_025822|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK005242|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK043731|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK045433|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr10_+_126500607_126500768	0.881049	BPTF.p2	BC046336|Cdk4|12567|cyclin-dependent kinase 4	NM_009870|Cdk4|12567|cyclin-dependent kinase 4	AK153465|Cdk4|12567|cyclin-dependent kinase 4	BC052694|Cdk4|12567|cyclin-dependent kinase 4	BC031599|Cdk4|12567|cyclin-dependent kinase 4	AK011871|Cdk4|12567|cyclin-dependent kinase 4	AK003804|Cdk4|12567|cyclin-dependent kinase 4	AK006918|Cdk4|12567|cyclin-dependent kinase 4	AK012064|Cdk4|12567|cyclin-dependent kinase 4	AK146107|Cdk4|12567|cyclin-dependent kinase 4	AK019380|Cdk4|12567|cyclin-dependent kinase 4	AK078440|Cdk4|12567|cyclin-dependent kinase 4	AK013400|Cdk4|12567|cyclin-dependent kinase 4	AK185090|Cdk4|12567|cyclin-dependent kinase 4
mm9_v1_chr16_+_22951144_22951164	0.880145	BPTF.p2	NM_053176|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chr2_-_84265422_84265424	0.880128	BPTF.p2	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr19_-_17447333_17447333	0.878989	BPTF.p2	D87332|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	NM_010265|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr1_+_93041665_93041717	0.878367	BPTF.p2	AK133355|Rbm44|329207|RNA binding motif protein 44	NM_001033408|Rbm44|329207|RNA binding motif protein 44	BC150950|Rbm44|329207|RNA binding motif protein 44
mm9_v1_chr2_-_94104877_94104914	0.878355	BPTF.p2	AK140370|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene	AK089118|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene
mm9_v1_chr6_+_129528268_129528303	0.878146	BPTF.p2	BC145177|Klre1|243655|killer cell lectin-like receptor family E member 1	AF306663|Klre1|243655|killer cell lectin-like receptor family E member 1	NM_153590|Klre1|243655|killer cell lectin-like receptor family E member 1
mm9_v1_chr1_+_82335623_82335683	0.878089	BPTF.p2	AK076751|Rhbdd1|76867|rhomboid domain containing 1	NM_001122685|Rhbdd1|76867|rhomboid domain containing 1	AK015167|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr4_+_44045506_44045645	0.877862	BPTF.p2	
mm9_v1_chr2_-_103325194_103325313	0.877006	BPTF.p2	M62897|Cat|12359|catalase	X52108|Cat|12359|catalase	BC047126|Cat|12359|catalase	AK159891|Cat|12359|catalase	AY040626|Cat|12359|catalase	AK159913|Cat|12359|catalase	BC013447|Cat|12359|catalase	AK088168|Cat|12359|catalase	AK169069|Cat|12359|catalase	L25069|Cat|12359|catalase	AK133881|Cat|12359|catalase	AK075853|Cat|12359|catalase	AK128919|Cat|12359|catalase	AK148961|Cat|12359|catalase	AK150893|Cat|12359|catalase	AK159152|Cat|12359|catalase	AK159885|Cat|12359|catalase	NM_009804|Cat|12359|catalase
mm9_v1_chr3_-_37318482_37318523	0.875672	BPTF.p2	AF453428|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK145299|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC027267|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC146000|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_153561|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6
mm9_v1_chrX_+_72759635_72759692	0.874369	BPTF.p2	NM_011692|Vbp1|22327|von Hippel-Lindau binding protein 1	AK167742|Vbp1|22327|von Hippel-Lindau binding protein 1	AK077923|Vbp1|22327|von Hippel-Lindau binding protein 1	AK002282|Vbp1|22327|von Hippel-Lindau binding protein 1	AK008847|Vbp1|22327|von Hippel-Lindau binding protein 1	AK051431|Vbp1|22327|von Hippel-Lindau binding protein 1	AK151527|Vbp1|22327|von Hippel-Lindau binding protein 1	AK159284|Vbp1|22327|von Hippel-Lindau binding protein 1	AK167064|Vbp1|22327|von Hippel-Lindau binding protein 1	AK169185|Vbp1|22327|von Hippel-Lindau binding protein 1	AK153069|Vbp1|22327|von Hippel-Lindau binding protein 1	U96760|Vbp1|22327|von Hippel-Lindau binding protein 1	BC132169|Vbp1|22327|von Hippel-Lindau binding protein 1	BC132171|Vbp1|22327|von Hippel-Lindau binding protein 1
mm9_v1_chr4_-_88928049_88928095	0.874336	BPTF.p2	AK155307|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	AF044335|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	AF044336|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	L76150|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	NM_001040654|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A
mm9_v1_chr18_-_78006491_78006518	0.874303	BPTF.p2	AK076912|Haus1|225745|HAUS augmin-like complex, subunit 1	AK146923|Haus1|225745|HAUS augmin-like complex, subunit 1	BC024400|Haus1|225745|HAUS augmin-like complex, subunit 1	NM_146089|Haus1|225745|HAUS augmin-like complex, subunit 1
mm9_v1_chr1_-_141755209_141755302	0.867828	BPTF.p2	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chr5_+_115224911_115225148	0.867292	BPTF.p2	AK039432|Ankrd13a|68420|ankyrin repeat domain 13a	AK156539|Ankrd13a|68420|ankyrin repeat domain 13a	BC049187|Ankrd13a|68420|ankyrin repeat domain 13a	BC061692|Ankrd13a|68420|ankyrin repeat domain 13a	NM_026718|Ankrd13a|68420|ankyrin repeat domain 13a
mm9_v1_chr11_+_49064088_49064104	0.867268	BPTF.p2	AK087959|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	BC006629|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr2_+_43604343_43604389	0.866784	BPTF.p2	AK036520|Arhgap15|76117|Rho GTPase activating protein 15	NM_153820|Arhgap15|76117|Rho GTPase activating protein 15	AK170537|Arhgap15|76117|Rho GTPase activating protein 15	NM_001025377|Arhgap15|76117|Rho GTPase activating protein 15	AK041323|Arhgap15|76117|Rho GTPase activating protein 15	AK033620|Arhgap15|76117|Rho GTPase activating protein 15	AK040796|Arhgap15|76117|Rho GTPase activating protein 15	AK172407|Arhgap15|76117|Rho GTPase activating protein 15	BC034881|Arhgap15|76117|Rho GTPase activating protein 15	AK018058|Arhgap15|76117|Rho GTPase activating protein 15	AK031022|Arhgap15|76117|Rho GTPase activating protein 15	BC024887|Arhgap15|76117|Rho GTPase activating protein 15
mm9_v1_chr7_-_20535921_20536091	0.86374	BPTF.p2	AK088927|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	BC139455|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	BC139458|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	AK008696|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	AK033677|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	NM_027308|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene
mm9_v1_chr15_+_76778938_76779018	0.862092	BPTF.p2	AK153059|1110038F14Rik|117171|RIKEN cDNA 1110038F14 gene	AK160695|1110038F14Rik|117171|RIKEN cDNA 1110038F14 gene	BC038324|1110038F14Rik|117171|RIKEN cDNA 1110038F14 gene	NM_054099|1110038F14Rik|117171|RIKEN cDNA 1110038F14 gene	AK004154|1110038F14Rik|117171|RIKEN cDNA 1110038F14 gene
mm9_v1_chr7_+_63049505_63049618	0.857335	BPTF.p2	NM_146190|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK051326|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK044887|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK160939|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK032031|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK086158|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK152033|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK153331|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK161681|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK151454|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK153357|Tubgcp5|233276|tubulin, gamma complex associated protein 5	AK044444|Tubgcp5|233276|tubulin, gamma complex associated protein 5
mm9_v1_chr6_+_113554717_113554774	0.857243	BPTF.p2	AK003342|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK020128|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK020277|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK150689|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK163236|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK166585|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	BC010582|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	NM_133937|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene
mm9_v1_chr16_-_62786533_62786611	0.855655	BPTF.p2	AK084698|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	AK080455|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	BC125628|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	BC125630|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	NM_178925|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	AK162988|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	AK032127|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	AK020172|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	AK088718|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	AK169841|Nsun3|106338|NOL1/NOP2/Sun domain family member 3	AK153942|Nsun3|106338|NOL1/NOP2/Sun domain family member 3
mm9_v1_chr9_-_7835107_7835268	0.855353	BPTF.p2	BC145985|Birc2|11797|baculoviral IAP repeat-containing 2	NM_007465|Birc2|11797|baculoviral IAP repeat-containing 2	U88909|Birc2|11797|baculoviral IAP repeat-containing 2	BC033480|Birc2|11797|baculoviral IAP repeat-containing 2
mm9_v1_chr10_+_80657435_80657438	0.854934	BPTF.p2	AK084504|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK136697|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK009897|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK033837|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene
mm9_v1_chr2_-_72817058_72817114	0.854893	BPTF.p2	AK132702|Sp3|20687|trans-acting transcription factor 3
mm9_v1_chr5_+_27375738_27375738	0.853509	BPTF.p2	AK158964|Dpp6|13483|dipeptidylpeptidase 6	NM_207282|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr18_+_80403581_80403591	0.852376	BPTF.p2	BC025053|Txnl4a|27366|thioredoxin-like 4A	NM_178604|Txnl4a|27366|thioredoxin-like 4A	AK171121|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr12_+_66176588_66176613	0.852157	BPTF.p2	AK039944|Fancm|104806|Fanconi anemia, complementation group M	AK084697|Fancm|104806|Fanconi anemia, complementation group M	AK086395|Fancm|104806|Fanconi anemia, complementation group M	AK050306|Fancm|104806|Fanconi anemia, complementation group M	NM_178912|Fancm|104806|Fanconi anemia, complementation group M	AK053715|Fancm|104806|Fanconi anemia, complementation group M	BC150785|Fancm|104806|Fanconi anemia, complementation group M	AK173211|Fancm|104806|Fanconi anemia, complementation group M
mm9_v1_chr3_+_88130348_88130443	0.852145	BPTF.p2	AK186454|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK219800|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene
mm9_v1_chrX_-_71469244_71469317	0.85117	BPTF.p2	AF119149|Flna|192176|filamin, alpha
mm9_v1_chr14_-_53110720_53110720	0.851127	BPTF.p2	BC119163|Olfr1507|57269|olfactory receptor 1507	BC119165|Olfr1507|57269|olfactory receptor 1507	NM_020512|Olfr1507|57269|olfactory receptor 1507
mm9_v1_chr13_-_89881914_89881931	0.85026	BPTF.p2	BC096495|Vcan|13003|versican	AK165069|Vcan|13003|versican	AK034871|Vcan|13003|versican	AK014525|Vcan|13003|versican
mm9_v1_chr8_-_49075724_49075738	0.849256	BPTF.p2	AK086956|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	AK079375|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr3_-_30498769_30498835	0.84841	BPTF.p2	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chr19_-_56622502_56622559	0.848001	BPTF.p2	NM_018831|Dclre1a|55947|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm9_v1_chr6_+_83276009_83276097	0.847011	BPTF.p2	AK028416|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK163300|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK172205|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	NM_145571|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK167515|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK170691|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	BC009149|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK158228|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK028695|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	BC033463|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr9_+_108411809_108411809	0.846654	BPTF.p2	BC023023|Qars|97541|glutaminyl-tRNA synthetase	NM_001168270|Qars|97541|glutaminyl-tRNA synthetase
mm9_v1_chr9_-_15084310_15084404	0.84589	BPTF.p2	BC020185|Med17|234959|mediator complex subunit 17	NM_144933|Med17|234959|mediator complex subunit 17	AK033151|Med17|234959|mediator complex subunit 17	AK142033|Med17|234959|mediator complex subunit 17	AK038451|Med17|234959|mediator complex subunit 17	AK049112|Med17|234959|mediator complex subunit 17	AK151377|Med17|234959|mediator complex subunit 17
mm9_v1_chr4_+_119487105_119487332	0.845774	BPTF.p2	AY454348|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	BC058336|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	NM_010657|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	AY454345|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr10_-_126467848_126467902	0.845105	BPTF.p2	BC034286|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK020437|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK169164|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK018591|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK141183|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK012240|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK171656|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK172112|Tsfm|66399|Ts translation elongation factor, mitochondrial	BC057904|Tsfm|66399|Ts translation elongation factor, mitochondrial	NM_025537|Tsfm|66399|Ts translation elongation factor, mitochondrial
mm9_v1_chr6_-_129826635_129826689	0.844362	BPTF.p2	BC132236|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AB033769|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AK080021|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	NM_133203|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17
mm9_v1_chr4_-_132313025_132313152	0.843627	BPTF.p2	AK166253|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	BC009087|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	NM_133888|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	AK154599|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B
mm9_v1_chr7_+_109386818_109386954	0.843147	BPTF.p2	AK019004|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr5_+_108329554_108329638	0.841477	BPTF.p2	AK013107|Rpl5|100503670|ribosomal protein L5	AK032778|Rpl5|100503670|ribosomal protein L5	AK152381|Rpl5|100503670|ribosomal protein L5	AK008489|Rpl5|100503670|ribosomal protein L5	AK169313|Rpl5|100503670|ribosomal protein L5	AK088036|Rpl5|100503670|ribosomal protein L5	BC005790|Rpl5|100503670|ribosomal protein L5	BC083318|Rpl5|100503670|ribosomal protein L5	BC026934|Rpl5|100503670|ribosomal protein L5	BC091752|Rpl5|100503670|ribosomal protein L5	NM_016980|Rpl5|100503670|ribosomal protein L5	AK166865|Rpl5|100503670|ribosomal protein L5	BC106128|Rpl5|100503670|ribosomal protein L5
mm9_v1_chr3_-_146278561_146278561	0.841377	BPTF.p2	AK079224|Dnase2b|56629|deoxyribonuclease II beta	NM_019957|Dnase2b|56629|deoxyribonuclease II beta
mm9_v1_chr13_-_49748135_49748153	0.839359	BPTF.p2	AK076577|Cenpp|66336|centromere protein P	BC094280|Cenpp|66336|centromere protein P
mm9_v1_chr13_-_101500801_101500875	0.839348	BPTF.p2	AK145759|Cdk7|12572|cyclin-dependent kinase 7	U11822|Cdk7|12572|cyclin-dependent kinase 7	BC141043|Cdk7|12572|cyclin-dependent kinase 7	BC004605|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr15_+_89041957_89042070	0.839211	BPTF.p2	AK084684|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_026813|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_027805|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK083335|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	BC024879|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK018403|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2
mm9_v1_chr16_-_37539763_37539874	0.837585	BPTF.p2	AK080478|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK154283|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK031528|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK011543|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	NM_028812|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK084978|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	BC056966|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)
mm9_v1_chr1_-_152313294_152313294	0.83732	BPTF.p2	AB034730|Prg4|96875|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	AK149469|Prg4|96875|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	NM_001110146|Prg4|96875|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	NM_021400|Prg4|96875|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
mm9_v1_chr5_+_88805132_88805132	0.837064	BPTF.p2	AK017352|Amtn|71421|amelotin	NM_027793|Amtn|71421|amelotin
mm9_v1_chr10_+_42580317_42580598	0.83622	BPTF.p2	NM_172938|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AF397911|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK034171|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	BC043310|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK047972|Scml4|268297|sex comb on midleg-like 4 (Drosophila)
mm9_v1_chr4_-_120861138_120861138	0.836121	BPTF.p2	NM_001081013|Rlf|109263|rearranged L-myc fusion sequence
mm9_v1_chr5_-_67490295_67490393	0.831683	BPTF.p2	AK052579|Phox2b|18935|paired-like homeobox 2b	BC079610|Phox2b|18935|paired-like homeobox 2b	NM_008888|Phox2b|18935|paired-like homeobox 2b	Y14493|Phox2b|18935|paired-like homeobox 2b
mm9_v1_chr11_+_87551052_87551101	0.83102	BPTF.p2	AK146235|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK168229|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK167941|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK002990|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC061174|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_009296|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC024391|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC087923|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43154|Supt4h1|20922|suppressor of Ty 4 homolog 1 (S. cerevisiae)
mm9_v1_chrX_-_102265380_102265463	0.830524	BPTF.p2	AK153718|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC019699|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK017459|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085485|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085098|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084980|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC055463|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK080296|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK043766|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK047017|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084653|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK144934|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK157237|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK164650|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene
mm9_v1_chr10_-_116719364_116719380	0.830355	BPTF.p2	AK159276|Lyz2|17105|lysozyme 2
mm9_v1_chr2_+_79547936_79548278	0.829966	BPTF.p2	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr17_+_8358382_8358453	0.829902	BPTF.p2	AK016110|Fgfr1op|75296|Fgfr1 oncogene partner	NM_001197046|Fgfr1op|75296|Fgfr1 oncogene partner	NM_201230|Fgfr1op|75296|Fgfr1 oncogene partner	AK029470|Fgfr1op|75296|Fgfr1 oncogene partner	BC108331|Fgfr1op|75296|Fgfr1 oncogene partner	BC080717|Fgfr1op|75296|Fgfr1 oncogene partner	AK031261|Fgfr1op|75296|Fgfr1 oncogene partner	BC050774|Fgfr1op|75296|Fgfr1 oncogene partner	AK050389|Fgfr1op|75296|Fgfr1 oncogene partner	BC058804|Fgfr1op|75296|Fgfr1 oncogene partner	AK028778|Fgfr1op|75296|Fgfr1 oncogene partner
mm9_v1_chr14_+_21520038_21520084	0.829542	BPTF.p2	
mm9_v1_chr1_+_89700245_89700254	0.829356	BPTF.p2	AK149299|Sag|20215|retinal S-antigen	NM_009118|Sag|20215|retinal S-antigen
mm9_v1_chr2_-_60591836_60591898	0.828668	BPTF.p2	AK159851|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr16_-_22265901_22266018	0.827824	BPTF.p2	BC057996|Tra2b|20462|transformer 2 beta homolog (Drosophila)	X80232|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC086795|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK080378|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK169483|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152519|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167387|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK077418|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC061177|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK150007|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK049573|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152761|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167544|Tra2b|20462|transformer 2 beta homolog (Drosophila)	NM_009186|Tra2b|20462|transformer 2 beta homolog (Drosophila)
mm9_v1_chr17_-_65944300_65944335	0.827639	BPTF.p2	AK149040|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr7_-_4349321_4349345	0.827199	BPTF.p2	AK079424|Gp6|243816|glycoprotein 6 (platelet)	BC138170|Gp6|243816|glycoprotein 6 (platelet)	BC145172|Gp6|243816|glycoprotein 6 (platelet)	NM_001163014|Gp6|243816|glycoprotein 6 (platelet)
mm9_v1_chr7_+_4866810_4866885	0.822275	BPTF.p2	AK155214|Zfp628|232816|zinc finger protein 628	NM_170759|Zfp628|232816|zinc finger protein 628	AK048291|Zfp628|232816|zinc finger protein 628	BC056945|Zfp628|232816|zinc finger protein 628	BC062973|Zfp628|232816|zinc finger protein 628
mm9_v1_chr9_+_77602337_77602341	0.821653	BPTF.p2	AK143228|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	AK144339|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr3_-_123088789_123088909	0.821447	BPTF.p2	AK083169|Mettl14|210529|methyltransferase like 14	AK089949|Mettl14|210529|methyltransferase like 14	AK129409|Mettl14|210529|methyltransferase like 14	BC052204|Mettl14|210529|methyltransferase like 14	AK136652|Mettl14|210529|methyltransferase like 14	AK146881|Mettl14|210529|methyltransferase like 14	AK153810|Mettl14|210529|methyltransferase like 14	NM_201638|Mettl14|210529|methyltransferase like 14
mm9_v1_chr6_+_149257918_149258112	0.82016	BPTF.p2	NM_026054|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK013408|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK017376|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK220403|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031989|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031797|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	BC139435|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	BC139436|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK031526|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene	AK079405|2810474O19Rik|67246|RIKEN cDNA 2810474O19 gene
mm9_v1_chr1_+_109407998_109408121	0.818259	BPTF.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chr5_+_38651466_38651637	0.815453	BPTF.p2	BC025197|Tmem128|66309|transmembrane protein 128	AK012789|Tmem128|66309|transmembrane protein 128	AK013227|Tmem128|66309|transmembrane protein 128	AK080853|Tmem128|66309|transmembrane protein 128	NM_025480|Tmem128|66309|transmembrane protein 128	AK162257|Tmem128|66309|transmembrane protein 128	AK076679|Tmem128|66309|transmembrane protein 128	BC060969|Tmem128|66309|transmembrane protein 128	BC110310|Tmem128|66309|transmembrane protein 128
mm9_v1_chr2_+_153571990_153572007	0.815149	BPTF.p2	BC052405|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr7_-_134530626_134530679	0.812798	BPTF.p2	AK020267|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	BC031466|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	AK035847|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene	NM_030226|9130019O22Rik|78921|RIKEN cDNA 9130019O22 gene
mm9_v1_chr8_+_73221637_73221637	0.812716	BPTF.p2	NM_010592|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chrX_+_7419025_7419257	0.812315	BPTF.p2	AK010750|Otud5|54644|OTU domain containing 5	AK149777|Otud5|54644|OTU domain containing 5	AK171874|Otud5|54644|OTU domain containing 5	BC051111|Otud5|54644|OTU domain containing 5	AK169921|Otud5|54644|OTU domain containing 5
mm9_v1_chr2_-_126444378_126444429	0.812217	BPTF.p2	X57437|Hdc|15186|histidine decarboxylase	BC052833|Hdc|15186|histidine decarboxylase	AK076384|Hdc|15186|histidine decarboxylase	AK150168|Hdc|15186|histidine decarboxylase	AK088545|Hdc|15186|histidine decarboxylase	AK153104|Hdc|15186|histidine decarboxylase	NM_008230|Hdc|15186|histidine decarboxylase	AK133455|Hdc|15186|histidine decarboxylase
mm9_v1_chr9_+_120040542_120040587	0.811819	BPTF.p2	
mm9_v1_chr2_+_155576833_155576871	0.810716	BPTF.p2	AK143719|Procr|19124|protein C receptor, endothelial
mm9_v1_chr8_+_74121544_74121680	0.809846	BPTF.p2	NM_001166213|Fam129c|100037278|family with sequence similarity 129, member C	AK158308|Fam129c|100037278|family with sequence similarity 129, member C
mm9_v1_chr14_-_71166340_71166465	0.808409	BPTF.p2	AJ297360|Xpo7|65246|exportin 7	AK041768|Xpo7|65246|exportin 7	AK051105|Xpo7|65246|exportin 7	AK035775|Xpo7|65246|exportin 7	BC029702|Xpo7|65246|exportin 7	AK164595|Xpo7|65246|exportin 7	NM_023045|Xpo7|65246|exportin 7
mm9_v1_chrX_-_165092598_165092599	0.808339	BPTF.p2	AK053927|Msl3|17692|male-specific lethal 3 homolog (Drosophila)
mm9_v1_chr11_+_46268432_46268486	0.807967	BPTF.p2	AK148474|Havcr2|171285|hepatitis A virus cellular receptor 2	NM_134250|Havcr2|171285|hepatitis A virus cellular receptor 2	AF450241|Havcr2|171285|hepatitis A virus cellular receptor 2	AY553334|Havcr2|171285|hepatitis A virus cellular receptor 2	AK170775|Havcr2|171285|hepatitis A virus cellular receptor 2	BC106851|Havcr2|171285|hepatitis A virus cellular receptor 2	BC106852|Havcr2|171285|hepatitis A virus cellular receptor 2	AF399831|Havcr2|171285|hepatitis A virus cellular receptor 2
mm9_v1_chr3_+_59885811_59885831	0.806818	BPTF.p2	BC096665|Sucnr1|84112|succinate receptor 1
mm9_v1_chr5_-_73143979_73144015	0.806722	BPTF.p2	U16145|Txk|22165|TXK tyrosine kinase	AK088209|Txk|22165|TXK tyrosine kinase	AK138069|Txk|22165|TXK tyrosine kinase	AK138786|Txk|22165|TXK tyrosine kinase	NM_001122754|Txk|22165|TXK tyrosine kinase	U19607|Txk|22165|TXK tyrosine kinase
mm9_v1_chr10_-_114821398_114821490	0.806528	BPTF.p2	BC027502|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK051198|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK009162|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK018577|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK081303|Thap2|66816|THAP domain containing, apoptosis associated protein 2	NM_025780|Thap2|66816|THAP domain containing, apoptosis associated protein 2
mm9_v1_chr11_-_77997042_77997098	0.805253	BPTF.p2	BC026656|Rpl23a|268449|ribosomal protein L23A	BC096637|Rpl23a|268449|ribosomal protein L23A	AF452721|Rpl23a|268449|ribosomal protein L23A	BC029892|Rpl23a|268449|ribosomal protein L23A	AK028387|Rpl23a|268449|ribosomal protein L23A	AK152095|Rpl23a|268449|ribosomal protein L23A	BC086884|Rpl23a|268449|ribosomal protein L23A	BC086883|Rpl23a|268449|ribosomal protein L23A	BC125640|Rpl23a|268449|ribosomal protein L23A	BC125642|Rpl23a|268449|ribosomal protein L23A	NM_207523|Rpl23a|268449|ribosomal protein L23A
mm9_v1_chr16_-_87440790_87440836	0.80261	BPTF.p2	AF177771|Rwdd2b|53858|RWD domain containing 2B	AK002746|Rwdd2b|53858|RWD domain containing 2B	AK084966|Rwdd2b|53858|RWD domain containing 2B	BC002143|Rwdd2b|53858|RWD domain containing 2B	NM_016924|Rwdd2b|53858|RWD domain containing 2B
mm9_v1_chr13_-_113891176_113891188	0.802057	BPTF.p2	M26183|Gzma|14938|granzyme A	AK146132|Gzma|14938|granzyme A	AK156728|Gzma|14938|granzyme A	X14799|Gzma|14938|granzyme A	BC061146|Gzma|14938|granzyme A	NM_010370|Gzma|14938|granzyme A
mm9_v1_chrX_-_70704286_70704406	0.801378	BPTF.p2	AK050729|Haus7|73738|HAUS augmin-like complex, subunit 7	BC025464|Haus7|73738|HAUS augmin-like complex, subunit 7	AY029337|Haus7|73738|HAUS augmin-like complex, subunit 7	NM_028633|Haus7|73738|HAUS augmin-like complex, subunit 7	NM_207104|Haus7|73738|HAUS augmin-like complex, subunit 7
mm9_v1_chr2_+_156665812_156665874	0.799351	BPTF.p2	AK029490|Tgif2|228839|TGFB-induced factor homeobox 2	NM_173396|Tgif2|228839|TGFB-induced factor homeobox 2	BC138706|Tgif2|228839|TGFB-induced factor homeobox 2	BC138705|Tgif2|228839|TGFB-induced factor homeobox 2	AK157623|Tgif2|228839|TGFB-induced factor homeobox 2	AK017884|Tgif2|228839|TGFB-induced factor homeobox 2
mm9_v1_chr10_+_87663839_87663973	0.79904	BPTF.p2	AK013835|Ccdc53|67282|coiled-coil domain containing 53	AK158822|Ccdc53|67282|coiled-coil domain containing 53	NM_001122960|Ccdc53|67282|coiled-coil domain containing 53	NM_026070|Ccdc53|67282|coiled-coil domain containing 53	NM_027487|Ccdc53|67282|coiled-coil domain containing 53	AK017732|Ccdc53|67282|coiled-coil domain containing 53	AK004206|Ccdc53|67282|coiled-coil domain containing 53	AK028599|Ccdc53|67282|coiled-coil domain containing 53	AK009358|Ccdc53|67282|coiled-coil domain containing 53	BC029256|Ccdc53|67282|coiled-coil domain containing 53
mm9_v1_chr3_+_88342459_88342597	0.797399	BPTF.p2	AK012557|Mex3a|72640|mex3 homolog A (C. elegans)
mm9_v1_chr11_-_70468130_70468151	0.795381	BPTF.p2	AK011066|Pfn1|18643|profilin 1	AK152491|Pfn1|18643|profilin 1	AK160191|Pfn1|18643|profilin 1	NM_011072|Pfn1|18643|profilin 1
mm9_v1_chr12_+_17273358_17273435	0.795105	BPTF.p2	AK167386|Pdia6|71853|protein disulfide isomerase associated 6	AK152960|Pdia6|71853|protein disulfide isomerase associated 6	AK005989|Pdia6|71853|protein disulfide isomerase associated 6	AK133792|Pdia6|71853|protein disulfide isomerase associated 6	AK166111|Pdia6|71853|protein disulfide isomerase associated 6	AK168136|Pdia6|71853|protein disulfide isomerase associated 6	AK168279|Pdia6|71853|protein disulfide isomerase associated 6	AK076558|Pdia6|71853|protein disulfide isomerase associated 6	NM_027959|Pdia6|71853|protein disulfide isomerase associated 6	BC006865|Pdia6|71853|protein disulfide isomerase associated 6	AK151008|Pdia6|71853|protein disulfide isomerase associated 6	AK165877|Pdia6|71853|protein disulfide isomerase associated 6
mm9_v1_chr6_-_130183339_130183339	0.793358	BPTF.p2	NM_001110323|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10093|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10095|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chr1_+_192886883_192886915	0.793342	BPTF.p2	NM_198654|Nsl1|381318|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	AK029421|Nsl1|381318|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	BC029086|Nsl1|381318|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr14_+_56590264_56590269	0.791704	BPTF.p2	AF361939|Cma2|545055|chymase 2, mast cell	NM_001024714|Cma2|545055|chymase 2, mast cell	BC139236|Cma2|545055|chymase 2, mast cell	BC139237|Cma2|545055|chymase 2, mast cell
mm9_v1_chr5_+_136559785_136559909	0.789848	BPTF.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr16_-_55843956_55843970	0.788684	BPTF.p2	AK034283|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr16_-_58928469_58928469	0.788394	BPTF.p2	NM_146999|Olfr181|259001|olfactory receptor 181
mm9_v1_chr2_-_84281089_84281145	0.788258	BPTF.p2	AK084706|Tfpi|21788|tissue factor pathway inhibitor
mm9_v1_chr14_-_104921839_104921882	0.787937	BPTF.p2	BC029231|Rnf219|72486|ring finger protein 219	AK020974|Rnf219|72486|ring finger protein 219	AK013314|Rnf219|72486|ring finger protein 219	NM_026047|Rnf219|72486|ring finger protein 219
mm9_v1_chr10_-_60610398_60610452	0.78679	BPTF.p2	NM_009163|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr5_+_104864146_104864160	0.786563	BPTF.p2	BC020355|Spp1|20750|secreted phosphoprotein 1	BC029991|Spp1|20750|secreted phosphoprotein 1	BC057858|Spp1|20750|secreted phosphoprotein 1	BC002113|Spp1|20750|secreted phosphoprotein 1	BC080720|Spp1|20750|secreted phosphoprotein 1	J04806|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr6_+_86959829_86959929	0.786488	BPTF.p2	AK145558|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	NM_001170591|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	NM_020045|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK081950|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK002244|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK003730|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AJ132616|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	BC018355|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AY335195|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
mm9_v1_chr9_+_118387306_118387461	0.786448	BPTF.p2	NM_001164789|Eomes|13813|eomesodermin homolog (Xenopus laevis)	NM_010136|Eomes|13813|eomesodermin homolog (Xenopus laevis)	AB031037|Eomes|13813|eomesodermin homolog (Xenopus laevis)	BC094319|Eomes|13813|eomesodermin homolog (Xenopus laevis)
mm9_v1_chr6_-_142421335_142421382	0.786235	BPTF.p2	AK138992|Gys2|232493|glycogen synthase 2	AK149391|Gys2|232493|glycogen synthase 2
mm9_v1_chr11_+_79997341_79997544	0.785794	BPTF.p2	AK010429|Rnf135|71956|ring finger protein 135	NM_028019|Rnf135|71956|ring finger protein 135	AK150921|Rnf135|71956|ring finger protein 135	BC132307|Rnf135|71956|ring finger protein 135	BC138303|Rnf135|71956|ring finger protein 135	BC145236|Rnf135|71956|ring finger protein 135	AK152096|Rnf135|71956|ring finger protein 135	BC096385|Rnf135|71956|ring finger protein 135	AK002781|Rnf135|71956|ring finger protein 135
mm9_v1_chr16_+_3908975_3909105	0.785205	BPTF.p2	BC024910|Cluap1|76779|clusterin associated protein 1	NM_029738|Cluap1|76779|clusterin associated protein 1	AK009540|Cluap1|76779|clusterin associated protein 1	AK134648|Cluap1|76779|clusterin associated protein 1	AK166050|Cluap1|76779|clusterin associated protein 1	AK011846|Cluap1|76779|clusterin associated protein 1
mm9_v1_chr7_+_104520120_104520143	0.784254	BPTF.p2	AK166897|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	NM_199035|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	AK141341|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	AK166755|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	BC061244|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)
mm9_v1_chr15_-_96471920_96471958	0.784203	BPTF.p2	AK047459|Slc38a1|105727|solute carrier family 38, member 1	AK165188|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr2_+_4480799_4480871	0.784004	BPTF.p2	AK077327|Frmd4a|209630|FERM domain containing 4A	NM_001177844|Frmd4a|209630|FERM domain containing 4A	AK148414|Frmd4a|209630|FERM domain containing 4A	AK029073|Frmd4a|209630|FERM domain containing 4A	AK171532|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr17_+_71553920_71554003	0.783504	BPTF.p2	AK165218|Lpin2|64898|lipin 2	AK050018|Lpin2|64898|lipin 2	NM_001164885|Lpin2|64898|lipin 2
mm9_v1_chr13_-_119175893_119176078	0.779599	BPTF.p2	AK013360|Mrps30|59054|mitochondrial ribosomal protein S30	BC029784|Mrps30|59054|mitochondrial ribosomal protein S30	AK011476|Mrps30|59054|mitochondrial ribosomal protein S30	AK151642|Mrps30|59054|mitochondrial ribosomal protein S30	NM_021556|Mrps30|59054|mitochondrial ribosomal protein S30
mm9_v1_chr9_+_19426528_19426594	0.779509	BPTF.p2	NM_172918|Zfp317|244713|zinc finger protein 317	AK051946|Zfp317|244713|zinc finger protein 317	AK045365|Zfp317|244713|zinc finger protein 317	BC059211|Zfp317|244713|zinc finger protein 317
mm9_v1_chr13_-_106083093_106083093	0.778573	BPTF.p2	AK136632|Rnf180|71816|ring finger protein 180	NM_027934|Rnf180|71816|ring finger protein 180
mm9_v1_chr12_-_102321911_102321936	0.777667	BPTF.p2	AK053668|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_001160214|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_211355|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr1_-_153317422_153317565	0.775787	BPTF.p2	AK211660|Rnf2|19821|ring finger protein 2
mm9_v1_chr5_+_90919758_90919765	0.775635	BPTF.p2	AK075972|Afp|11576|alpha fetoprotein	AK076197|Afp|11576|alpha fetoprotein	AK146513|Afp|11576|alpha fetoprotein	AK146524|Afp|11576|alpha fetoprotein	AK168426|Afp|11576|alpha fetoprotein	AK168574|Afp|11576|alpha fetoprotein	AK168751|Afp|11576|alpha fetoprotein	AK169046|Afp|11576|alpha fetoprotein	AK169054|Afp|11576|alpha fetoprotein	AK010934|Afp|11576|alpha fetoprotein	AK076053|Afp|11576|alpha fetoprotein	AK145975|Afp|11576|alpha fetoprotein	AK168576|Afp|11576|alpha fetoprotein	AK168883|Afp|11576|alpha fetoprotein	AK169147|Afp|11576|alpha fetoprotein	AK167549|Afp|11576|alpha fetoprotein	V00743|Afp|11576|alpha fetoprotein
mm9_v1_chr2_-_121206675_121206675	0.775426	BPTF.p2	AF375593|Strc|140476|stereocilin	NM_080459|Strc|140476|stereocilin
mm9_v1_chr10_-_126959446_126959510	0.774646	BPTF.p2	AK037339|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	BC004825|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK051207|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	NM_028230|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK162421|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr1_+_24685475_24685527	0.773821	BPTF.p2	BC027774|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr9_+_106183391_106183391	0.773404	BPTF.p2	NM_027354|Poc1a|70235|POC1 centriolar protein homolog A (Chlamydomonas)
mm9_v1_chr3_+_94964364_94964444	0.771997	BPTF.p2	AK165085|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	BC083186|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	BC059007|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	BC051979|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK031131|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm9_v1_chr9_+_59526881_59526990	0.769816	BPTF.p2	AK187622|Pkm2|18746|pyruvate kinase, muscle	AK189986|Pkm2|18746|pyruvate kinase, muscle	AK191750|Pkm2|18746|pyruvate kinase, muscle	AK193178|Pkm2|18746|pyruvate kinase, muscle	AK194857|Pkm2|18746|pyruvate kinase, muscle	AK195839|Pkm2|18746|pyruvate kinase, muscle	AK196046|Pkm2|18746|pyruvate kinase, muscle	AK196682|Pkm2|18746|pyruvate kinase, muscle	AK198278|Pkm2|18746|pyruvate kinase, muscle	AK198346|Pkm2|18746|pyruvate kinase, muscle	AK198579|Pkm2|18746|pyruvate kinase, muscle	AK199500|Pkm2|18746|pyruvate kinase, muscle	AK200354|Pkm2|18746|pyruvate kinase, muscle	AK201799|Pkm2|18746|pyruvate kinase, muscle	AK204154|Pkm2|18746|pyruvate kinase, muscle	AK219384|Pkm2|18746|pyruvate kinase, muscle	AK197608|Pkm2|18746|pyruvate kinase, muscle
mm9_v1_chr12_-_88605193_88605194	0.769647	BPTF.p2	NM_134044|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	BC023716|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator
mm9_v1_chr8_+_27268640_27268693	0.768949	BPTF.p2	NM_199042|Thap1|73754|THAP domain containing, apoptosis associated protein 1	BC038639|Thap1|73754|THAP domain containing, apoptosis associated protein 1
mm9_v1_chr2_-_155127037_155127091	0.766862	BPTF.p2	BC013076|Pigu|228812|phosphatidylinositol glycan anchor biosynthesis, class U
mm9_v1_chr3_+_103718042_103718073	0.766243	BPTF.p2	AB101658|Rsbn1|229675|rosbin, round spermatid basic protein 1	NM_172684|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139213|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139215|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chrX_+_99314793_99314850	0.766162	BPTF.p2	BC119355|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC119357|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_027181|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK010338|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
mm9_v1_chr15_-_97551580_97551592	0.766088	BPTF.p2	M95545|Endou|19011|endonuclease, polyU-specific	NM_008902|Endou|19011|endonuclease, polyU-specific	AK169457|Endou|19011|endonuclease, polyU-specific
mm9_v1_chr7_+_17401610_17401709	0.765287	BPTF.p2	AK161673|Strn4|97387|striatin, calmodulin binding protein 4	BC080283|Strn4|97387|striatin, calmodulin binding protein 4	AK154615|Strn4|97387|striatin, calmodulin binding protein 4
mm9_v1_chr11_+_49064013_49064076	0.76358	BPTF.p2	AK155322|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	AK004760|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	NM_001110150|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chrX_+_75614981_75614981	0.763159	BPTF.p2	AK015598|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116859|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116861|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	NM_001177966|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene
mm9_v1_chr16_+_18426529_18426595	0.761857	BPTF.p2	BC013688|Txnrd2|26462|thioredoxin reductase 2	BC052157|Txnrd2|26462|thioredoxin reductase 2	BC052758|Txnrd2|26462|thioredoxin reductase 2	AK075828|Txnrd2|26462|thioredoxin reductase 2	BC029344|Txnrd2|26462|thioredoxin reductase 2	AF171053|Txnrd2|26462|thioredoxin reductase 2
mm9_v1_chr16_+_30065419_30065442	0.761338	BPTF.p2	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr1_+_123327668_123327740	0.761041	BPTF.p2	AK014621|Ccdc93|70829|coiled-coil domain containing 93	AK159415|Ccdc93|70829|coiled-coil domain containing 93	AK052300|Ccdc93|70829|coiled-coil domain containing 93	AK020306|Ccdc93|70829|coiled-coil domain containing 93	AK085701|Ccdc93|70829|coiled-coil domain containing 93	BC054083|Ccdc93|70829|coiled-coil domain containing 93
mm9_v1_chrX_+_72661966_72662056	0.759846	BPTF.p2	NM_001166457|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_001166459|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_145956|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	S68022|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK149844|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK028483|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK030736|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC021313|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK038919|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK011876|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC048179|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3
mm9_v1_chr7_+_52409767_52409773	0.75951	BPTF.p2	AK016797|Pih1d1|68845|PIH1 domain containing 1	NM_029406|Pih1d1|68845|PIH1 domain containing 1
mm9_v1_chr11_-_115474200_115474295	0.758897	BPTF.p2	BC026745|Mif4gd|69674|MIF4G domain containing	AK010175|Mif4gd|69674|MIF4G domain containing	AK150749|Mif4gd|69674|MIF4G domain containing	BC019515|Mif4gd|69674|MIF4G domain containing	BC026740|Mif4gd|69674|MIF4G domain containing
mm9_v1_chr1_-_108693180_108693301	0.757968	BPTF.p2	AK168270|Vps4b|20479|vacuolar protein sorting 4b (yeast)	BC003799|Vps4b|20479|vacuolar protein sorting 4b (yeast)	AK165594|Vps4b|20479|vacuolar protein sorting 4b (yeast)	U10119|Vps4b|20479|vacuolar protein sorting 4b (yeast)	AK151023|Vps4b|20479|vacuolar protein sorting 4b (yeast)	AK152131|Vps4b|20479|vacuolar protein sorting 4b (yeast)	NM_009190|Vps4b|20479|vacuolar protein sorting 4b (yeast)
mm9_v1_chr19_+_34141847_34141847	0.75709	BPTF.p2	AK154333|Lipn|70166|lipase, family member N	NM_027340|Lipn|70166|lipase, family member N
mm9_v1_chr11_-_69431369_69431406	0.756443	BPTF.p2	U85644|Shbg|20415|sex hormone binding globulin	BC120785|Shbg|20415|sex hormone binding globulin	BC120787|Shbg|20415|sex hormone binding globulin	AK010959|Shbg|20415|sex hormone binding globulin	NM_011367|Shbg|20415|sex hormone binding globulin
mm9_v1_chr19_-_7877065_7877081	0.756406	BPTF.p2	AJ132857|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr8_+_73895190_73895211	0.755993	BPTF.p2	AK163762|Ocel1|77090|occludin/ELL domain containing 1	NM_029865|Ocel1|77090|occludin/ELL domain containing 1
mm9_v1_chr11_+_101489262_101489282	0.755477	BPTF.p2	AK010457|Rdm1|66599|RAD52 motif 1	NM_025654|Rdm1|66599|RAD52 motif 1	BC055013|Rdm1|66599|RAD52 motif 1	AK003135|Rdm1|66599|RAD52 motif 1	BC026811|Rdm1|66599|RAD52 motif 1
mm9_v1_chr10_+_120834091_120834108	0.755211	BPTF.p2	
mm9_v1_chr8_-_109620089_109620171	0.754422	BPTF.p2	AK160421|Terf2|21750|telomeric repeat binding factor 2
mm9_v1_chr10_+_127691240_127691249	0.754411	BPTF.p2	BC034832|Apon|28194|apolipoprotein N
mm9_v1_chrX_-_165625110_165625142	0.753734	BPTF.p2	BC059090|Amelx|11704|amelogenin X chromosome	D31768|Amelx|11704|amelogenin X chromosome	D31769|Amelx|11704|amelogenin X chromosome	AK029358|Amelx|11704|amelogenin X chromosome	NM_001081978|Amelx|11704|amelogenin X chromosome	NM_009666|Amelx|11704|amelogenin X chromosome	S74899|Amelx|11704|amelogenin X chromosome
mm9_v1_chr12_-_29233201_29233201	0.75284	BPTF.p2	AK003729|Dcdc2c|68511|doublecortin domain containing 2C	NM_001177964|Dcdc2c|68511|doublecortin domain containing 2C
mm9_v1_chr16_-_48772068_48772250	0.752484	BPTF.p2	BC104350|Trat1|77647|T cell receptor associated transmembrane adaptor 1	BC104351|Trat1|77647|T cell receptor associated transmembrane adaptor 1	NM_198297|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AJ297969|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK138735|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK030807|Trat1|77647|T cell receptor associated transmembrane adaptor 1
mm9_v1_chr18_-_67608747_67608862	0.75221	BPTF.p2	AK009650|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	AK149970|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	AK155403|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	BC021380|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	BC043056|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	NM_027130|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	AK151207|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	AK152115|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	AK152727|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	BC036999|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	AK164537|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)	AK168668|Afg3l2|69597|AFG3(ATPase family gene 3)-like 2 (yeast)
mm9_v1_chr5_-_100929644_100929677	0.75219	BPTF.p2	AK220225|Lin54|231506|lin-54 homolog (C. elegans)	AK134320|Lin54|231506|lin-54 homolog (C. elegans)	AK029288|Lin54|231506|lin-54 homolog (C. elegans)	NM_172714|Lin54|231506|lin-54 homolog (C. elegans)
mm9_v1_chr19_+_56471580_56471618	0.751151	BPTF.p2	NM_007611|Casp7|12369|caspase 7	Y13088|Casp7|12369|caspase 7
mm9_v1_chr11_+_102297838_102297879	0.751147	BPTF.p2	
mm9_v1_chr5_+_77739506_77739565	0.750203	BPTF.p2	AK039766|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B	NM_153798|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B	BC016415|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B	BC038472|Polr2b|231329|polymerase (RNA) II (DNA directed) polypeptide B
mm9_v1_chr4_+_126234210_126234268	0.75012	BPTF.p2	AK053847|Clspn|269582|claspin homolog (Xenopus laevis)	NM_175554|Clspn|269582|claspin homolog (Xenopus laevis)	AK045076|Clspn|269582|claspin homolog (Xenopus laevis)	AK135394|Clspn|269582|claspin homolog (Xenopus laevis)	AK051966|Clspn|269582|claspin homolog (Xenopus laevis)	BC050848|Clspn|269582|claspin homolog (Xenopus laevis)
mm9_v1_chr17_-_35164860_35164960	0.750022	BPTF.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr7_+_128084130_128084187	0.748022	BPTF.p2	AK002918|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr1_-_53813191_53813277	0.747807	BPTF.p2	
mm9_v1_chr4_+_11631592_11631656	0.746238	BPTF.p2	AK157655|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK158393|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK168401|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	NM_010276|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK153999|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK169699|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	U13053|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	BC029668|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK171336|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)
mm9_v1_chr3_+_102799658_102799677	0.746224	BPTF.p2	AK014113|Sike1|66641|suppressor of IKBKE 1	AK033553|Sike1|66641|suppressor of IKBKE 1	NM_025679|Sike1|66641|suppressor of IKBKE 1	AK017452|Sike1|66641|suppressor of IKBKE 1	AK017694|Sike1|66641|suppressor of IKBKE 1	BC004090|Sike1|66641|suppressor of IKBKE 1	AK019264|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr17_+_18435244_18435244	0.744717	BPTF.p2	NM_001104542|Vmn2r93|627132|vomeronasal 2, receptor 93
mm9_v1_chr7_-_134158053_134158131	0.744327	BPTF.p2	BC006709|Mvp|78388|major vault protein	AK167899|Mvp|78388|major vault protein	AK168100|Mvp|78388|major vault protein	AK152534|Mvp|78388|major vault protein	AK088046|Mvp|78388|major vault protein	AF210456|Mvp|78388|major vault protein	NM_080638|Mvp|78388|major vault protein
mm9_v1_chr5_+_104868321_104868417	0.744226	BPTF.p2	BC014284|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr15_-_79572885_79572998	0.743416	BPTF.p2	BC098208|Sun2|223697|Sad1 and UNC84 domain containing 2	AK171058|Sun2|223697|Sad1 and UNC84 domain containing 2	AK046318|Sun2|223697|Sad1 and UNC84 domain containing 2	AK085196|Sun2|223697|Sad1 and UNC84 domain containing 2	AK128958|Sun2|223697|Sad1 and UNC84 domain containing 2	NM_194342|Sun2|223697|Sad1 and UNC84 domain containing 2	AK156246|Sun2|223697|Sad1 and UNC84 domain containing 2	AK172398|Sun2|223697|Sad1 and UNC84 domain containing 2
mm9_v1_chr3_+_88336316_88336316	0.743415	BPTF.p2	NM_001029890|Mex3a|72640|mex3 homolog A (C. elegans)
mm9_v1_chr3_+_142283605_142283716	0.743102	BPTF.p2	BC032882|Gbp2|14469|guanylate binding protein 2	AF077007|Gbp2|14469|guanylate binding protein 2	NM_010260|Gbp2|14469|guanylate binding protein 2	BC011336|Gbp2|14469|guanylate binding protein 2	AJ007970|Gbp2|14469|guanylate binding protein 2	BC049141|Gbp2|14469|guanylate binding protein 2	AF109168|Gbp2|14469|guanylate binding protein 2	AK150138|Gbp2|14469|guanylate binding protein 2
mm9_v1_chr2_-_85488475_85488475	0.743072	BPTF.p2	NM_146573|Olfr1002|258566|olfactory receptor 1002
mm9_v1_chr1_+_167693876_167693939	0.742948	BPTF.p2	AK005388|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK010947|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK144101|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AF084524|Creg1|433375|cellular repressor of E1A-stimulated genes 1	BC027426|Creg1|433375|cellular repressor of E1A-stimulated genes 1	NM_011804|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK150006|Creg1|433375|cellular repressor of E1A-stimulated genes 1
mm9_v1_chr1_-_88008483_88008544	0.742826	BPTF.p2	BC023690|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	AK033713|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	NM_008311|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B
mm9_v1_chr3_+_58329742_58329982	0.742349	BPTF.p2	NM_001005509|Eif2a|229317|eukaryotic translation initiation factor 2A	AK145275|Eif2a|229317|eukaryotic translation initiation factor 2A	BC082557|Eif2a|229317|eukaryotic translation initiation factor 2A	AK161904|Eif2a|229317|eukaryotic translation initiation factor 2A	AK050971|Eif2a|229317|eukaryotic translation initiation factor 2A	AK078519|Eif2a|229317|eukaryotic translation initiation factor 2A	BC030447|Eif2a|229317|eukaryotic translation initiation factor 2A
mm9_v1_chr5_+_108741806_108741943	0.741121	BPTF.p2	NM_001081234|Pigg|433931|phosphatidylinositol glycan anchor biosynthesis, class G
mm9_v1_chr6_+_38553293_38553312	0.740493	BPTF.p2	AK138070|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr9_+_7272513_7272544	0.740453	BPTF.p2	BC125320|Mmp13|17386|matrix metallopeptidase 13	BC125322|Mmp13|17386|matrix metallopeptidase 13	NM_008607|Mmp13|17386|matrix metallopeptidase 13	AK150728|Mmp13|17386|matrix metallopeptidase 13	AK151626|Mmp13|17386|matrix metallopeptidase 13	AK152916|Mmp13|17386|matrix metallopeptidase 13	AK153458|Mmp13|17386|matrix metallopeptidase 13	AK155188|Mmp13|17386|matrix metallopeptidase 13	AK152507|Mmp13|17386|matrix metallopeptidase 13	AK159921|Mmp13|17386|matrix metallopeptidase 13	AK160819|Mmp13|17386|matrix metallopeptidase 13	X66473|Mmp13|17386|matrix metallopeptidase 13
mm9_v1_chr10_+_98570768_98570804	0.740192	BPTF.p2	NM_015737|Galnt4|14426|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4	AK153253|Galnt4|14426|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4	BC057882|Galnt4|14426|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4	AK148036|Galnt4|14426|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4	AK033494|Galnt4|14426|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4
mm9_v1_chr14_+_31371919_31371994	0.740121	BPTF.p2	AF195533|Tkt|21881|transketolase	AK177246|Tkt|21881|transketolase	AK193096|Tkt|21881|transketolase	AK209594|Tkt|21881|transketolase
mm9_v1_chr8_-_42502362_42502487	0.739848	BPTF.p2	AK079229|Frg1|14300|FSHD region gene 1	AK077107|Frg1|14300|FSHD region gene 1	BC002027|Frg1|14300|FSHD region gene 1	U62105|Frg1|14300|FSHD region gene 1	NM_013522|Frg1|14300|FSHD region gene 1
mm9_v1_chr4_+_45355369_45355371	0.739234	BPTF.p2	AK083428|Dcaf10|242418|DDB1 and CUL4 associated factor 10
mm9_v1_chr18_+_34936642_34936758	0.738208	BPTF.p2	NM_001081256|Kdm3b|277250|KDM3B lysine (K)-specific demethylase 3B	BC151084|Kdm3b|277250|KDM3B lysine (K)-specific demethylase 3B	BC172150|Kdm3b|277250|KDM3B lysine (K)-specific demethylase 3B	AK129281|Kdm3b|277250|KDM3B lysine (K)-specific demethylase 3B	AK147120|Kdm3b|277250|KDM3B lysine (K)-specific demethylase 3B	AK165170|Kdm3b|277250|KDM3B lysine (K)-specific demethylase 3B
mm9_v1_chr10_-_5734448_5734544	0.737994	BPTF.p2	EU791538|Esr1|13982|estrogen receptor 1 (alpha)	AK036627|Esr1|13982|estrogen receptor 1 (alpha)	NM_007956|Esr1|13982|estrogen receptor 1 (alpha)	AJ272164|Esr1|13982|estrogen receptor 1 (alpha)	AK039911|Esr1|13982|estrogen receptor 1 (alpha)	AK041525|Esr1|13982|estrogen receptor 1 (alpha)	AK033270|Esr1|13982|estrogen receptor 1 (alpha)
mm9_v1_chr11_+_59120429_59120467	0.73766	BPTF.p2	AK087490|Wnt9a|216795|wingless-type MMTV integration site 9A	NM_139298|Wnt9a|216795|wingless-type MMTV integration site 9A	BC066165|Wnt9a|216795|wingless-type MMTV integration site 9A	AB072311|Wnt9a|216795|wingless-type MMTV integration site 9A
mm9_v1_chr14_-_59984246_59984326	0.737387	BPTF.p2	BC145673|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	BC110663|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	AK156583|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed	NM_199015|D14Ertd668e|219132|DNA segment, Chr 14, ERATO Doi 668, expressed
mm9_v1_chr10_-_78215809_78215811	0.736569	BPTF.p2	AK016452|Ccdc105|70976|coiled-coil domain containing 105	NM_027630|Ccdc105|70976|coiled-coil domain containing 105
mm9_v1_chr10_-_122513447_122513560	0.735465	BPTF.p2	AK122425|Mon2|67074|MON2 homolog (yeast)	NM_001163024|Mon2|67074|MON2 homolog (yeast)	NM_001163025|Mon2|67074|MON2 homolog (yeast)	NM_153395|Mon2|67074|MON2 homolog (yeast)
mm9_v1_chr6_-_49213980_49214011	0.735366	BPTF.p2	AK171788|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK172413|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC057448|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC058764|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076606|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr15_-_88979923_88980035	0.734154	BPTF.p2	AK161190|Mapk11|19094|mitogen-activated protein kinase 11	BC057211|Mapk11|19094|mitogen-activated protein kinase 11	AK161562|Mapk11|19094|mitogen-activated protein kinase 11	BC064737|Mapk11|19094|mitogen-activated protein kinase 11	AK144846|Mapk11|19094|mitogen-activated protein kinase 11	AF135185|Mapk11|19094|mitogen-activated protein kinase 11	BC092526|Mapk11|19094|mitogen-activated protein kinase 11	NM_011161|Mapk11|19094|mitogen-activated protein kinase 11
mm9_v1_chr10_-_127188724_127188780	0.734146	BPTF.p2	BC125279|Gpr182|11536|G protein-coupled receptor 182	D17292|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr4_-_14753720_14753733	0.7341	BPTF.p2	NM_152812|Otud6b|72201|OTU domain containing 6B
mm9_v1_chrX_-_20539095_20539142	0.732931	BPTF.p2	AK027917|Uxt|22294|ubiquitously expressed transcript	NM_013840|Uxt|22294|ubiquitously expressed transcript	AK086822|Uxt|22294|ubiquitously expressed transcript	AK163983|Uxt|22294|ubiquitously expressed transcript
mm9_v1_chr10_-_41307558_41307558	0.732305	BPTF.p2	AK017165|Ccdc162|75973|coiled-coil domain containing 162	NM_001177571|Ccdc162|75973|coiled-coil domain containing 162
mm9_v1_chr2_-_50152180_50152256	0.732204	BPTF.p2	BC002253|Mmadhc|109129|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	NM_133839|Mmadhc|109129|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
mm9_v1_chr13_+_119503505_119503505	0.731505	BPTF.p2	AK045267|Fgf10|14165|fibroblast growth factor 10	NM_008002|Fgf10|14165|fibroblast growth factor 10
mm9_v1_chr2_-_84567398_84567416	0.731301	BPTF.p2	AK145209|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK077647|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chr5_-_138042267_138042299	0.730854	BPTF.p2	BC039620|Mospd3|68929|motile sperm domain containing 3	NM_030037|Mospd3|68929|motile sperm domain containing 3	BC034167|Mospd3|68929|motile sperm domain containing 3
mm9_v1_chr7_+_17038265_17038424	0.728659	BPTF.p2	AK007386|Tmem160|69094|transmembrane protein 160	AK088338|Tmem160|69094|transmembrane protein 160	AK166985|Tmem160|69094|transmembrane protein 160
mm9_v1_chrX_+_97800835_97800900	0.728258	BPTF.p2	NM_133205|Arr3|170735|arrestin 3, retinal	AF156979|Arr3|170735|arrestin 3, retinal	BC017145|Arr3|170735|arrestin 3, retinal
mm9_v1_chr4_-_149072713_149072721	0.727943	BPTF.p2	AK149935|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK150649|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK151482|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK152661|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm9_v1_chr17_-_47639222_47639245	0.727838	BPTF.p2	BC057895|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	BC023756|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AF222802|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK045108|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK049949|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK076486|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK086656|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK161658|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	AK162110|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	NM_022015|Taf8|63856|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq
mm9_v1_chr4_-_19636000_19636212	0.727452	BPTF.p2	AK137588|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	BC026829|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK168567|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK032232|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK042432|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	NM_177327|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr3_+_123045975_123046085	0.727015	BPTF.p2	BC038038|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)	BC049257|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr17_-_35972184_35972488	0.726675	BPTF.p2	M28732|Tubb5|22154|tubulin, beta 5	BC047993|Tubb5|22154|tubulin, beta 5
mm9_v1_chr14_-_32390502_32390568	0.725735	BPTF.p2	BC107386|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC107387|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AK134212|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_009937|Colq|382864|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
mm9_v1_chr7_-_117987867_117987920	0.724153	BPTF.p2	BC096563|Rnf141|67150|ring finger protein 141	AK011839|Rnf141|67150|ring finger protein 141	BC018553|Rnf141|67150|ring finger protein 141	AK015505|Rnf141|67150|ring finger protein 141	NM_025999|Rnf141|67150|ring finger protein 141	AF353167|Rnf141|67150|ring finger protein 141	AK154417|Rnf141|67150|ring finger protein 141
mm9_v1_chr19_+_22767090_22767108	0.724097	BPTF.p2	AK086143|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK085182|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035244|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035245|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035246|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr17_-_34164996_34165023	0.724081	BPTF.p2	BC086927|H2-Ke6|14979|H2-K region expressed gene 6	NM_013543|H2-Ke6|14979|H2-K region expressed gene 6
mm9_v1_chr4_-_3761538_3761694	0.720027	BPTF.p2	AK150667|Rps20|67427|ribosomal protein S20
mm9_v1_chr10_-_126807486_126807599	0.719493	BPTF.p2	BC026140|Inhbc|16325|inhibin beta-C	X90819|Inhbc|16325|inhibin beta-C	NM_010565|Inhbc|16325|inhibin beta-C	U95962|Inhbc|16325|inhibin beta-C
mm9_v1_chr2_-_160773804_160773823	0.718612	BPTF.p2	AK017414|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr1_+_95721816_95721878	0.718088	BPTF.p2	AK170226|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	NM_178882|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK141691|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	BC023277|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK088200|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	AK088554|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase	BC117794|D2hgdh|98314|D-2-hydroxyglutarate dehydrogenase
mm9_v1_chr2_-_29643157_29643203	0.717525	BPTF.p2	BC024075|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK167294|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	BC015285|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK050583|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK087102|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK050587|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK081579|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK043949|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	NM_145520|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)
mm9_v1_chr11_-_40562329_40562432	0.716816	BPTF.p2	
mm9_v1_chr7_+_130267398_130267398	0.713606	BPTF.p2	NM_144925|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr18_+_61747381_61747495	0.712499	BPTF.p2	AK217508|Csnk1a1|93687|casein kinase 1, alpha 1	AK218260|Csnk1a1|93687|casein kinase 1, alpha 1	AK211333|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr12_+_86311859_86311909	0.712468	BPTF.p2	NM_028632|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC094619|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC033045|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)
mm9_v1_chr10_+_19868276_19868291	0.711823	BPTF.p2	AK133267|Mtap7|17761|microtubule-associated protein 7
mm9_v1_chr14_-_99498905_99499000	0.711613	BPTF.p2	AK012840|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	BC027357|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	AK038313|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	NM_028315|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)
mm9_v1_chr6_-_119303490_119303640	0.711565	BPTF.p2	AK003228|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr4_+_154929136_154929270	0.711336	BPTF.p2	AK218112|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK190349|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK191980|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK199789|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK200062|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr13_-_12612537_12612714	0.710564	BPTF.p2	AK148351|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	AK041545|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	AK042414|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	AF358671|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	NM_133643|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain
mm9_v1_chr6_-_130287518_130287643	0.710081	BPTF.p2	U56404|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U56405|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC101952|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103543|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103544|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103545|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132524|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132526|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145192|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145193|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U10305|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	AK159595|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U49868|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	NM_010648|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U09739|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3
mm9_v1_chr6_-_126889539_126889638	0.708362	BPTF.p2	BC003738|Rad51ap1|19362|RAD51 associated protein 1	AK010920|Rad51ap1|19362|RAD51 associated protein 1	U93583|Rad51ap1|19362|RAD51 associated protein 1	AK011379|Rad51ap1|19362|RAD51 associated protein 1	NM_009013|Rad51ap1|19362|RAD51 associated protein 1	AK079525|Rad51ap1|19362|RAD51 associated protein 1	AK077829|Rad51ap1|19362|RAD51 associated protein 1	AK166703|Rad51ap1|19362|RAD51 associated protein 1
mm9_v1_chr3_-_120874549_120874636	0.708182	BPTF.p2	AK014130|Rwdd3|66568|RWD domain containing 3	AK134288|Rwdd3|66568|RWD domain containing 3	AK153551|Rwdd3|66568|RWD domain containing 3	AF439556|Rwdd3|66568|RWD domain containing 3	AF439557|Rwdd3|66568|RWD domain containing 3	AK011007|Rwdd3|66568|RWD domain containing 3	AK011008|Rwdd3|66568|RWD domain containing 3	BC128287|Rwdd3|66568|RWD domain containing 3	BC128288|Rwdd3|66568|RWD domain containing 3	BC139340|Rwdd3|66568|RWD domain containing 3	BC139342|Rwdd3|66568|RWD domain containing 3	BC150838|Rwdd3|66568|RWD domain containing 3	AK151329|Rwdd3|66568|RWD domain containing 3	AK151467|Rwdd3|66568|RWD domain containing 3	NM_025637|Rwdd3|66568|RWD domain containing 3	NM_028456|Rwdd3|66568|RWD domain containing 3
mm9_v1_chr11_+_3102585_3102764	0.707991	BPTF.p2	NM_023743|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AK090363|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	BC033410|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AB031388|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1
mm9_v1_chr1_+_172949049_172949057	0.70768	BPTF.p2	AK076532|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AK087863|Fcgr4|246256|Fc receptor, IgG, low affinity IV	NM_144559|Fcgr4|246256|Fc receptor, IgG, low affinity IV
mm9_v1_chrX_+_103222548_103222685	0.706525	BPTF.p2	AK017506|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK033254|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_001109757|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_009726|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK155643|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK171563|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK172209|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U03434|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U71091|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	BC141395|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr12_+_106440631_106440634	0.706214	BPTF.p2	AF195492|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4	NM_013774|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4	BC145148|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4	BC145788|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4
mm9_v1_chr15_-_5058532_5058532	0.704823	BPTF.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr5_-_104421860_104421906	0.703171	BPTF.p2	AK033054|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr8_+_109417539_109417610	0.702805	BPTF.p2	NM_011574|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	BC068113|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK144455|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK146263|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK150862|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK168470|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK173318|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)
mm9_v1_chr2_-_126701791_126701996	0.701088	BPTF.p2	BC145122|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	BC150709|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF376052|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK162483|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK014698|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF149013|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AY032951|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK052823|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_001164325|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_021450|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7
mm9_v1_chr1_+_140864297_140864301	0.70107	BPTF.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr8_+_114062242_114062242	0.699776	BPTF.p2	NM_001168623|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr4_-_124370770_124370859	0.699551	BPTF.p2	BC043139|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK012550|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	NM_026031|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK147113|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	BC061074|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK145266|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr3_-_154718282_154718370	0.699507	BPTF.p2	AK052882|Tnni3k|435766|TNNI3 interacting kinase	BC139368|Tnni3k|435766|TNNI3 interacting kinase	BC139394|Tnni3k|435766|TNNI3 interacting kinase	AK084817|Tnni3k|435766|TNNI3 interacting kinase	AY526095|Tnni3k|435766|TNNI3 interacting kinase	AY526096|Tnni3k|435766|TNNI3 interacting kinase	NM_177066|Tnni3k|435766|TNNI3 interacting kinase
mm9_v1_chr11_+_117693543_117693586	0.69782	BPTF.p2	AK018563|Afmid|71562|arylformamidase
mm9_v1_chr3_+_67234003_67234103	0.697783	BPTF.p2	NM_138591|Gfm1|28030|G elongation factor, mitochondrial 1	AK033214|Gfm1|28030|G elongation factor, mitochondrial 1	BC013093|Gfm1|28030|G elongation factor, mitochondrial 1	BC031772|Gfm1|28030|G elongation factor, mitochondrial 1	AF315511|Gfm1|28030|G elongation factor, mitochondrial 1
mm9_v1_chr7_-_109835767_109835842	0.697508	BPTF.p2	BC034249|Trim68|101700|tripartite motif-containing 68	AK164544|Trim68|101700|tripartite motif-containing 68	AK089546|Trim68|101700|tripartite motif-containing 68	AK155267|Trim68|101700|tripartite motif-containing 68	NM_198012|Trim68|101700|tripartite motif-containing 68
mm9_v1_chr1_+_58504476_58504476	0.697375	BPTF.p2	BC065163|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)	NM_022988|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)
mm9_v1_chr11_+_60513191_60513346	0.695673	BPTF.p2	NM_001159404|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_001159405|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_008502|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC055399|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	AK159412|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	D16141|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC050913|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)
mm9_v1_chr6_+_72297294_72297363	0.695419	BPTF.p2	AK085662|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	NM_026696|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC064080|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	AK013079|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC066053|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC117811|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC117812|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	AK002701|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene
mm9_v1_chr10_-_74495269_74495330	0.695011	BPTF.p2	BC147792|Rtdr1|71236|rhabdoid tumor deletion region gene 1	BC147801|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163534|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163535|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK017008|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK077078|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163533|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_027730|Rtdr1|71236|rhabdoid tumor deletion region gene 1
mm9_v1_chr9_+_5308846_5308883	0.694949	BPTF.p2	AK078836|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK138730|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK151547|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	BC061255|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	NM_007609|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK156667|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK160328|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK171877|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	U59463|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	Y13089|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase
mm9_v1_chr17_+_35272688_35272836	0.694747	BPTF.p2	AK164266|Bag6|224727|BCL2-associated athanogene 6	AK170134|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr3_-_108692732_108692925	0.694346	BPTF.p2	BC111898|Fndc7|320181|fibronectin type III domain containing 7	BC113188|Fndc7|320181|fibronectin type III domain containing 7	AK053989|Fndc7|320181|fibronectin type III domain containing 7	AK054241|Fndc7|320181|fibronectin type III domain containing 7	NM_001165965|Fndc7|320181|fibronectin type III domain containing 7	NM_177091|Fndc7|320181|fibronectin type III domain containing 7
mm9_v1_chr16_+_11405740_11405785	0.694177	BPTF.p2	AK017102|Snx29|74478|sorting nexin 29	NM_028964|Snx29|74478|sorting nexin 29	AF399755|Snx29|74478|sorting nexin 29
mm9_v1_chrX_-_35988248_35988263	0.69369	BPTF.p2	AK005118|C1galt1c1|59048|C1GALT1-specific chaperone 1	AK161729|C1galt1c1|59048|C1GALT1-specific chaperone 1	AK008040|C1galt1c1|59048|C1GALT1-specific chaperone 1
mm9_v1_chr4_+_125773958_125773995	0.692969	BPTF.p2	AK143443|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC026476|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC024543|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr5_+_93696566_93696638	0.692053	BPTF.p2	NM_007635|Ccng2|12452|cyclin G2	AK170651|Ccng2|12452|cyclin G2	AF005885|Ccng2|12452|cyclin G2
mm9_v1_chr18_+_21119972_21120137	0.691787	BPTF.p2	AK016103|Rnf125|67664|ring finger protein 125	AB259692|Rnf125|67664|ring finger protein 125
mm9_v1_chr11_-_100334076_100334121	0.69147	BPTF.p2	BC111873|Klhl11|217194|kelch-like 11 (Drosophila)	AK029101|Klhl11|217194|kelch-like 11 (Drosophila)	NM_172565|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr10_+_82822948_82823029	0.691134	BPTF.p2	NM_026579|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK128995|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK049544|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK160350|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK147063|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK020067|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	AK162255|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	BC050904|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	BC094241|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed	BC035946|D10Wsu102e|28109|DNA segment, Chr 10, Wayne State University 102, expressed
mm9_v1_chr16_-_93603971_93604059	0.690591	BPTF.p2	BC029101|Setd4|224440|SET domain containing 4	AY037804|Setd4|224440|SET domain containing 4	NM_145482|Setd4|224440|SET domain containing 4
mm9_v1_chr17_+_27194207_27194289	0.688385	BPTF.p2	AK134443|Itpr3|16440|inositol 1,4,5-triphosphate receptor 3	NM_080553|Itpr3|16440|inositol 1,4,5-triphosphate receptor 3
mm9_v1_chr11_-_86331141_86331142	0.68793	BPTF.p2	AK012045|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1
mm9_v1_chr16_-_16829386_16829548	0.687906	BPTF.p2	AF173866|Spag6|50525|sperm associated antigen 6	BC090660|Spag6|50525|sperm associated antigen 6	AK053966|Spag6|50525|sperm associated antigen 6	AK005732|Spag6|50525|sperm associated antigen 6	BC100455|Spag6|50525|sperm associated antigen 6	AK054199|Spag6|50525|sperm associated antigen 6	NM_015773|Spag6|50525|sperm associated antigen 6	AK164680|Spag6|50525|sperm associated antigen 6
mm9_v1_chr7_-_108729674_108729685	0.687579	BPTF.p2	AF016463|Art2b|11872|ADP-ribosyltransferase 2b	AF016465|Art2b|11872|ADP-ribosyltransferase 2b	NM_019915|Art2b|11872|ADP-ribosyltransferase 2b	X87612|Art2b|11872|ADP-ribosyltransferase 2b	S79913|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chr19_+_21354915_21354945	0.686403	BPTF.p2	AK185148|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr2_+_132512617_132512719	0.686244	BPTF.p2	BC138171|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	AK004090|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chrX_-_35988178_35988234	0.684817	BPTF.p2	AB030184|C1galt1c1|59048|C1GALT1-specific chaperone 1	AY159320|C1galt1c1|59048|C1GALT1-specific chaperone 1
mm9_v1_chr6_+_135312948_135312972	0.684137	BPTF.p2	BC046299|Emp1|13730|epithelial membrane protein 1	NM_010128|Emp1|13730|epithelial membrane protein 1	X98403|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr4_+_32887220_32887251	0.68386	BPTF.p2	NM_175364|Lyrm2|108755|LYR motif containing 2	AK044791|Lyrm2|108755|LYR motif containing 2	BC028533|Lyrm2|108755|LYR motif containing 2
mm9_v1_chr15_+_25901865_25901876	0.68334	BPTF.p2	AK088619|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr5_+_77020738_77020827	0.683327	BPTF.p2	BC062951|Cep135|381644|centrosomal protein 135	NM_199032|Cep135|381644|centrosomal protein 135	AK172988|Cep135|381644|centrosomal protein 135
mm9_v1_chr6_-_52195743_52195808	0.682722	BPTF.p2	BC119302|Hoxa11|15396|homeobox A11	U20370|Hoxa11|15396|homeobox A11	NM_010450|Hoxa11|15396|homeobox A11	BC052232|Hoxa11|15396|homeobox A11	AK133481|Hoxa11|15396|homeobox A11
mm9_v1_chr5_+_138462503_138462503	0.681492	BPTF.p2	AJ245454|Smok3a|545814|sperm motility kinase 3A	NM_001168602|Smok3a|545814|sperm motility kinase 3A
mm9_v1_chr2_+_90620127_90620146	0.680748	BPTF.p2	BC039616|Fnbp4|55935|formin binding protein 4
mm9_v1_chr10_-_126959397_126959444	0.679019	BPTF.p2	BC051396|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK012355|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK169192|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr5_+_130535973_130536156	0.678738	BPTF.p2	
mm9_v1_chr6_+_54766562_54766917	0.677691	BPTF.p2	AF513708|Znrf2|387524|zinc and ring finger 2	NM_199143|Znrf2|387524|zinc and ring finger 2	BC104316|Znrf2|387524|zinc and ring finger 2	BC104317|Znrf2|387524|zinc and ring finger 2	BC125242|Znrf2|387524|zinc and ring finger 2
mm9_v1_chr3_-_68808386_68808491	0.677485	BPTF.p2	BC034101|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK042231|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK129339|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK147305|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	NM_026641|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)
mm9_v1_chr6_+_35210429_35210433	0.677307	BPTF.p2	AK206324|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene
mm9_v1_chr2_+_154262286_154262318	0.676863	BPTF.p2	BC138410|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC145266|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC145679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK153602|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chrX_+_21061748_21061785	0.676561	BPTF.p2	AK140941|Agtr2|11609|angiotensin II receptor, type 2	AK086334|Agtr2|11609|angiotensin II receptor, type 2	NM_007429|Agtr2|11609|angiotensin II receptor, type 2	L32840|Agtr2|11609|angiotensin II receptor, type 2	S67465|Agtr2|11609|angiotensin II receptor, type 2	U04828|Agtr2|11609|angiotensin II receptor, type 2
mm9_v1_chr17_-_18020889_18020919	0.676204	BPTF.p2	NM_013521|Fpr1|14293|formyl peptide receptor 1	AK137714|Fpr1|14293|formyl peptide receptor 1
mm9_v1_chr11_-_118216819_118216830	0.675854	BPTF.p2	AK081522|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr1_+_65973093_65973127	0.675131	BPTF.p2	AK013953|Crygf|12969|crystallin, gamma F	NM_027010|Crygf|12969|crystallin, gamma F	BC056453|Crygf|12969|crystallin, gamma F	M64543|Crygf|12969|crystallin, gamma F
mm9_v1_chr15_-_43114220_43114328	0.673822	BPTF.p2	BC029177|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	U54563|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK011436|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK161650|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK146936|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK002576|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK165929|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK088269|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK088104|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	AK145059|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	BC010252|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E	NM_008388|Eif3e|16341|eukaryotic translation initiation factor 3, subunit E
mm9_v1_chr4_+_66488753_66488865	0.673258	BPTF.p2	AK154297|Tlr4|21898|toll-like receptor 4	AK170566|Tlr4|21898|toll-like receptor 4	AF110133|Tlr4|21898|toll-like receptor 4	NM_021297|Tlr4|21898|toll-like receptor 4	AF185285|Tlr4|21898|toll-like receptor 4
mm9_v1_chr3_+_95465860_95465866	0.672176	BPTF.p2	AK160634|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr17_+_26389892_26389910	0.671941	BPTF.p2	AK017655|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK007781|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK010539|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr2_+_144096600_144096679	0.671683	BPTF.p2	AK159286|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	BC063088|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr15_-_82594551_82594616	0.671122	BPTF.p2	BC061152|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40	NM_023623|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40	AK004984|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40	BC087906|Cyp2d40|71754|cytochrome P450, family 2, subfamily d, polypeptide 40
mm9_v1_chr5_+_125997405_125997482	0.670209	BPTF.p2	
mm9_v1_chr4_+_116366388_116366453	0.669048	BPTF.p2	AK184215|Prdx1|18477|peroxiredoxin 1	AK184318|Prdx1|18477|peroxiredoxin 1
mm9_v1_chr9_+_62189138_62189256	0.668175	BPTF.p2	NM_009672|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AK020753|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	BC062899|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AF022957|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr1_-_180260325_180260384	0.667754	BPTF.p2	
mm9_v1_chr19_-_11765519_11765545	0.667746	BPTF.p2	BC100313|Oosp1|170834|oocyte secreted protein 1	AB086437|Oosp1|170834|oocyte secreted protein 1	AB050982|Oosp1|170834|oocyte secreted protein 1	AK033038|Oosp1|170834|oocyte secreted protein 1	AK162132|Oosp1|170834|oocyte secreted protein 1	NM_133353|Oosp1|170834|oocyte secreted protein 1	AF420487|Oosp1|170834|oocyte secreted protein 1
mm9_v1_chr16_+_84835131_84835235	0.665592	BPTF.p2	AK139916|Gabpa|14390|GA repeat binding protein, alpha	AK145446|Gabpa|14390|GA repeat binding protein, alpha	AK150455|Gabpa|14390|GA repeat binding protein, alpha
mm9_v1_chr4_+_140542775_140542957	0.665358	BPTF.p2	AK171554|Atp13a2|74772|ATPase type 13A2	NM_001164366|Atp13a2|74772|ATPase type 13A2	NM_029097|Atp13a2|74772|ATPase type 13A2	AK156104|Atp13a2|74772|ATPase type 13A2	BC023746|Atp13a2|74772|ATPase type 13A2	AK171305|Atp13a2|74772|ATPase type 13A2	BC042661|Atp13a2|74772|ATPase type 13A2	BC025028|Atp13a2|74772|ATPase type 13A2	AK191875|Atp13a2|74772|ATPase type 13A2	AK197341|Atp13a2|74772|ATPase type 13A2	AK204523|Atp13a2|74772|ATPase type 13A2
mm9_v1_chr11_-_74991244_74991377	0.663739	BPTF.p2	AK206282|Ovca2|246257|candidate tumor suppressor in ovarian cancer 2
mm9_v1_chr4_+_146237770_146237770	0.663587	BPTF.p2	NM_027285|1700029I01Rik|70005|RIKEN cDNA 1700029I01 gene
mm9_v1_chr18_-_35064624_35064726	0.663529	BPTF.p2	AK195141|Etf1|225363|eukaryotic translation termination factor 1	AK218551|Etf1|225363|eukaryotic translation termination factor 1
mm9_v1_chr13_+_27334298_27334313	0.662449	BPTF.p2	AK005542|Prl3b1|18776|prolactin family 3, subfamily b, member 1	AK005543|Prl3b1|18776|prolactin family 3, subfamily b, member 1	AK131667|Prl3b1|18776|prolactin family 3, subfamily b, member 1	M14647|Prl3b1|18776|prolactin family 3, subfamily b, member 1	NM_008865|Prl3b1|18776|prolactin family 3, subfamily b, member 1	AK167483|Prl3b1|18776|prolactin family 3, subfamily b, member 1	BC099386|Prl3b1|18776|prolactin family 3, subfamily b, member 1
mm9_v1_chr4_+_122731563_122731731	0.661969	BPTF.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr19_+_43764161_43764183	0.661887	BPTF.p2	AK170546|Entpd7|93685|ectonucleoside triphosphate diphosphohydrolase 7	NM_053103|Entpd7|93685|ectonucleoside triphosphate diphosphohydrolase 7
mm9_v1_chr12_+_81619976_81620155	0.661746	BPTF.p2	NM_001081421|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB045325|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AK138883|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	AB175683|Galntl1|108760|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
mm9_v1_chr8_-_3720642_3720662	0.661719	BPTF.p2	BC025069|Clec4g|75863|C-type lectin domain family 4, member g	AK079992|Clec4g|75863|C-type lectin domain family 4, member g	BC087963|Clec4g|75863|C-type lectin domain family 4, member g	NM_029465|Clec4g|75863|C-type lectin domain family 4, member g
mm9_v1_chr17_+_10512744_10512791	0.661654	BPTF.p2	AK012373|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene	AK046926|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene
mm9_v1_chr5_+_145844689_145844781	0.658615	BPTF.p2	AB024984|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	NM_019767|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK003986|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK145663|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK076107|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	BC001988|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK002475|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A
mm9_v1_chr16_-_88826362_88826389	0.658563	BPTF.p2	BC104263|Krtap14|23927|keratin associated protein 14	BC104262|Krtap14|23927|keratin associated protein 14	AF003691|Krtap14|23927|keratin associated protein 14	D85925|Krtap14|23927|keratin associated protein 14	NM_013707|Krtap14|23927|keratin associated protein 14
mm9_v1_chr6_-_72382855_72382865	0.658459	BPTF.p2	
mm9_v1_chr16_+_38562924_38562994	0.658345	BPTF.p2	AK169127|Tmem39a|67846|transmembrane protein 39a	AK011646|Tmem39a|67846|transmembrane protein 39a	AK133638|Tmem39a|67846|transmembrane protein 39a	AK017817|Tmem39a|67846|transmembrane protein 39a	BC020318|Tmem39a|67846|transmembrane protein 39a	NM_026407|Tmem39a|67846|transmembrane protein 39a
mm9_v1_chr8_-_114045907_114045969	0.657433	BPTF.p2	AK173301|Wdr59|319481|WD repeat domain 59
mm9_v1_chr8_+_34763918_34764151	0.65697	BPTF.p2	AK040136|Gsr|14782|glutathione reductase	X76341|Gsr|14782|glutathione reductase	AK159678|Gsr|14782|glutathione reductase	AK019177|Gsr|14782|glutathione reductase	AK159218|Gsr|14782|glutathione reductase	AK151063|Gsr|14782|glutathione reductase	AK151247|Gsr|14782|glutathione reductase	AK152873|Gsr|14782|glutathione reductase	AK084328|Gsr|14782|glutathione reductase	AK167393|Gsr|14782|glutathione reductase	AK151674|Gsr|14782|glutathione reductase
mm9_v1_chr8_+_77972592_77972689	0.656956	BPTF.p2	AK005693|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	NM_001164235|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	NM_027944|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	BC117767|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	BC117768|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene
mm9_v1_chr1_-_64167574_64167617	0.656185	BPTF.p2	AB221646|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr15_-_8273428_8273486	0.655757	BPTF.p2	AK135347|Nipbl|71175|Nipped-B homolog (Drosophila)
mm9_v1_chr15_+_57526212_57526467	0.6554	BPTF.p2	NM_199449|Zhx2|387609|zinc fingers and homeoboxes 2	AK157631|Zhx2|387609|zinc fingers and homeoboxes 2	AK031782|Zhx2|387609|zinc fingers and homeoboxes 2	BC059178|Zhx2|387609|zinc fingers and homeoboxes 2
mm9_v1_chr6_-_92133945_92134035	0.655026	BPTF.p2	AK131114|Mrps25|64658|mitochondrial ribosomal protein S25	AK013196|Mrps25|64658|mitochondrial ribosomal protein S25	AK004037|Mrps25|64658|mitochondrial ribosomal protein S25	BC022953|Mrps25|64658|mitochondrial ribosomal protein S25	NM_025578|Mrps25|64658|mitochondrial ribosomal protein S25
mm9_v1_chr5_+_147644465_147644491	0.653986	BPTF.p2	NM_019647|Rpl21|19933|ribosomal protein L21
mm9_v1_chr17_-_24854956_24855001	0.653952	BPTF.p2	AK005854|Rnf151|67504|ring finger protein 151	AK005850|Rnf151|67504|ring finger protein 151	BC049562|Rnf151|67504|ring finger protein 151	NM_026205|Rnf151|67504|ring finger protein 151
mm9_v1_chr17_-_46900585_46900660	0.653699	BPTF.p2	BC119062|Ptcra|19208|pre T-cell antigen receptor alpha	BC120746|Ptcra|19208|pre T-cell antigen receptor alpha	NM_011195|Ptcra|19208|pre T-cell antigen receptor alpha	U16958|Ptcra|19208|pre T-cell antigen receptor alpha
mm9_v1_chr9_+_18208861_18208863	0.653336	BPTF.p2	AK139937|Ubtfl1|546118|upstream binding transcription factor, RNA polymerase I-like 1	NM_001033793|Ubtfl1|546118|upstream binding transcription factor, RNA polymerase I-like 1	AK163257|Ubtfl1|546118|upstream binding transcription factor, RNA polymerase I-like 1
mm9_v1_chr3_+_55046548_55046561	0.653221	BPTF.p2	AF155819|Dclk1|13175|doublecortin-like kinase 1	BC050903|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr6_-_72383243_72383360	0.653135	BPTF.p2	AK191201|Mat2a|232087|methionine adenosyltransferase II, alpha	AK191379|Mat2a|232087|methionine adenosyltransferase II, alpha	AK192240|Mat2a|232087|methionine adenosyltransferase II, alpha	AK195580|Mat2a|232087|methionine adenosyltransferase II, alpha	AK196623|Mat2a|232087|methionine adenosyltransferase II, alpha	AK197103|Mat2a|232087|methionine adenosyltransferase II, alpha	AK200816|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203805|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203913|Mat2a|232087|methionine adenosyltransferase II, alpha	AK201922|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr6_-_70741991_70742200	0.652127	BPTF.p2	BC053526|Rpia|19895|ribose 5-phosphate isomerase A	AK137235|Rpia|19895|ribose 5-phosphate isomerase A	L35034|Rpia|19895|ribose 5-phosphate isomerase A	NM_009075|Rpia|19895|ribose 5-phosphate isomerase A
mm9_v1_chr1_+_177562307_177562314	0.651801	BPTF.p2	AK129011|Kmo|98256|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
mm9_v1_chr14_+_26761977_26762068	0.650958	BPTF.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_26901730_26901821	0.650958	BPTF.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_27041341_27041432	0.650958	BPTF.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr2_-_156712810_156712927	0.650131	BPTF.p2	AK030877|Sla2|77799|Src-like-adaptor 2	AK138709|Sla2|77799|Src-like-adaptor 2	NM_029983|Sla2|77799|Src-like-adaptor 2	AF434990|Sla2|77799|Src-like-adaptor 2	AF287467|Sla2|77799|Src-like-adaptor 2	BC052655|Sla2|77799|Src-like-adaptor 2	AK088672|Sla2|77799|Src-like-adaptor 2
mm9_v1_chr10_+_21993165_21993285	0.650086	BPTF.p2	NM_001177775|H60b|667281|histocompatibility 60b	FJ594066|Raet1d|56554|retinoic acid early transcript delta
mm9_v1_chr14_+_56194622_56194627	0.649963	BPTF.p2	AK003939|Fitm1|68680|fat storage-inducing transmembrane protein 1
mm9_v1_chr1_+_169280320_169280395	0.647825	BPTF.p2	AK132336|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK149589|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK162354|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	BC003297|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AF170919|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK150093|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1
mm9_v1_chr2_+_150043834_150043834	0.647805	BPTF.p2	AB470966|Zfp937|245174|zinc finger protein 937	NM_001142411|Zfp937|245174|zinc finger protein 937
mm9_v1_chr4_+_125773896_125773946	0.64763	BPTF.p2	NM_001163266|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	NM_138721|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr4_-_49421014_49421022	0.645679	BPTF.p2	AK050357|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	AK050308|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	NM_145368|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2
mm9_v1_chr18_+_5046584_5046587	0.644809	BPTF.p2	AF317422|Svil|225115|supervillin	AF317423|Svil|225115|supervillin	NM_153153|Svil|225115|supervillin	HQ259291|Svil|225115|supervillin
mm9_v1_chr15_-_36094462_36094638	0.644606	BPTF.p2	AK030012|Fbxo43|78803|F-box protein 43	AK019714|Fbxo43|78803|F-box protein 43	BC098484|Fbxo43|78803|F-box protein 43	NM_001081253|Fbxo43|78803|F-box protein 43
mm9_v1_chr18_-_35821788_35821845	0.643658	BPTF.p2	BC060950|Spata24|71242|spermatogenesis associated 24	AK017218|Spata24|71242|spermatogenesis associated 24	AK016341|Spata24|71242|spermatogenesis associated 24	AK012241|Spata24|71242|spermatogenesis associated 24	AY730532|Spata24|71242|spermatogenesis associated 24	NM_027733|Spata24|71242|spermatogenesis associated 24	NM_029485|Spata24|71242|spermatogenesis associated 24
mm9_v1_chr10_+_111409750_111409849	0.642328	BPTF.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr1_+_24258538_24258666	0.64083	BPTF.p2	AK017395|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr3_+_30645214_30645214	0.640411	BPTF.p2	AK044227|Samd7|75953|sterile alpha motif domain containing 7	NM_029489|Samd7|75953|sterile alpha motif domain containing 7
mm9_v1_chr9_-_95758738_95758738	0.639532	BPTF.p2	BC053441|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene	NM_028533|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene
mm9_v1_chr6_+_139789965_139790178	0.639378	BPTF.p2	AB008792|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	NM_011084|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054415|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054271|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054266|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	BC061142|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm9_v1_chr7_-_16973112_16973224	0.638216	BPTF.p2	AK010313|Sae1|56459|SUMO1 activating enzyme subunit 1	AK090012|Sae1|56459|SUMO1 activating enzyme subunit 1	AK162789|Sae1|56459|SUMO1 activating enzyme subunit 1	AB024303|Sae1|56459|SUMO1 activating enzyme subunit 1	BC068164|Sae1|56459|SUMO1 activating enzyme subunit 1	NM_019748|Sae1|56459|SUMO1 activating enzyme subunit 1	AK087556|Sae1|56459|SUMO1 activating enzyme subunit 1	AK159672|Sae1|56459|SUMO1 activating enzyme subunit 1	AK011772|Sae1|56459|SUMO1 activating enzyme subunit 1	AK154139|Sae1|56459|SUMO1 activating enzyme subunit 1
mm9_v1_chr16_+_87553574_87553800	0.638107	BPTF.p2	AY033899|ORF63|224419|open reading frame 63	NM_144854|ORF63|224419|open reading frame 63	AK041664|ORF63|224419|open reading frame 63	BC115624|ORF63|224419|open reading frame 63	BC115625|ORF63|224419|open reading frame 63
mm9_v1_chr18_+_31948788_31948829	0.637936	BPTF.p2	AK011600|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027002|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	AK009093|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	BC004810|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027101|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D
mm9_v1_chr2_-_14976498_14976510	0.637016	BPTF.p2	AK016629|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	NM_001165941|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	NM_001165943|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	AK016811|Nsun6|74455|NOL1/NOP2/Sun domain family member 6
mm9_v1_chr11_+_61466797_61466853	0.636721	BPTF.p2	AK018457|Grap|71520|GRB2-related adaptor protein	NM_027817|Grap|71520|GRB2-related adaptor protein	BC120674|Grap|71520|GRB2-related adaptor protein	BC120676|Grap|71520|GRB2-related adaptor protein
mm9_v1_chr16_-_26371711_26371924	0.635616	BPTF.p2	CT010299|Cldn1|12737|claudin 1	EU076705|Cldn1|12737|claudin 1	BC008536|Cldn1|12737|claudin 1	AF072127|Cldn1|12737|claudin 1	AK054207|Cldn1|12737|claudin 1	BC002003|Cldn1|12737|claudin 1	AK036762|Cldn1|12737|claudin 1	AK028428|Cldn1|12737|claudin 1	AK081601|Cldn1|12737|claudin 1	AK036780|Cldn1|12737|claudin 1	AK040604|Cldn1|12737|claudin 1	NM_016674|Cldn1|12737|claudin 1
mm9_v1_chr16_+_96422319_96422322	0.635459	BPTF.p2	AK017399|Sh3bgr|50795|SH3-binding domain glutamic acid-rich protein
mm9_v1_chr11_-_23397927_23397986	0.635241	BPTF.p2	BC038397|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	BC052829|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK033696|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK093945|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	NM_172391|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK154196|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK155265|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK137116|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
mm9_v1_chr12_-_57637894_57637894	0.634748	BPTF.p2	BC057607|Nkx2-1|21869|NK2 homeobox 1	NM_009385|Nkx2-1|21869|NK2 homeobox 1
mm9_v1_chr1_-_65003291_65003407	0.634735	BPTF.p2	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr1_+_177562321_177562338	0.633007	BPTF.p2	BC014683|Kmo|98256|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	NM_133809|Kmo|98256|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
mm9_v1_chr3_+_103083215_103083215	0.632954	BPTF.p2	AY458590|Trim33|94093|tripartite motif-containing 33	NM_001079830|Trim33|94093|tripartite motif-containing 33	NM_053170|Trim33|94093|tripartite motif-containing 33
mm9_v1_chr15_-_98398066_98398161	0.632796	BPTF.p2	AF087662|Ccnt1|12455|cyclin T1	AF095640|Ccnt1|12455|cyclin T1	AF109179|Ccnt1|12455|cyclin T1	AF113951|Ccnt1|12455|cyclin T1	BC131685|Ccnt1|12455|cyclin T1	BC131686|Ccnt1|12455|cyclin T1	NM_009833|Ccnt1|12455|cyclin T1	AK083037|Ccnt1|12455|cyclin T1
mm9_v1_chr8_-_114045885_114045888	0.631531	BPTF.p2	AK030644|Wdr59|319481|WD repeat domain 59
mm9_v1_chr12_+_29334466_29334512	0.63008	BPTF.p2	NM_011275|Rnaseh1|19819|ribonuclease H1	AK011680|Rnaseh1|19819|ribonuclease H1	AF048993|Rnaseh1|19819|ribonuclease H1
mm9_v1_chr4_-_6917628_6917956	0.629918	BPTF.p2	AK161718|Tox|252838|thymocyte selection-associated high mobility group box	AK161578|Tox|252838|thymocyte selection-associated high mobility group box	AF472514|Tox|252838|thymocyte selection-associated high mobility group box	AK029694|Tox|252838|thymocyte selection-associated high mobility group box	AK133397|Tox|252838|thymocyte selection-associated high mobility group box	BC080732|Tox|252838|thymocyte selection-associated high mobility group box	AK038671|Tox|252838|thymocyte selection-associated high mobility group box	NM_145711|Tox|252838|thymocyte selection-associated high mobility group box
mm9_v1_chr2_+_34262301_34262360	0.629479	BPTF.p2	AK132263|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr6_+_145756902_145756931	0.629345	BPTF.p2	AF424737|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_027760|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC115779|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC117546|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm9_v1_chr17_+_25359526_25359671	0.62922	BPTF.p2	AK004898|Unkl|74154|unkempt-like (Drosophila)	NM_028789|Unkl|74154|unkempt-like (Drosophila)	BC150842|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chr6_-_115568804_115568831	0.62774	BPTF.p2	AK189599|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr15_+_75799550_75799614	0.62676	BPTF.p2	AK137962|Zfp707|69020|zinc finger protein 707	NM_001081065|Zfp707|69020|zinc finger protein 707
mm9_v1_chr10_+_110182506_110182701	0.626239	BPTF.p2	AK051521|E2f7|52679|E2F transcription factor 7	NM_178609|E2f7|52679|E2F transcription factor 7	AK031078|E2f7|52679|E2F transcription factor 7	AK041481|E2f7|52679|E2F transcription factor 7	AY463359|E2f7|52679|E2F transcription factor 7	AK143686|E2f7|52679|E2F transcription factor 7	BC145429|E2f7|52679|E2F transcription factor 7	BC150772|E2f7|52679|E2F transcription factor 7	AK045040|E2f7|52679|E2F transcription factor 7
mm9_v1_chr7_+_52112520_52112725	0.626112	BPTF.p2	AK160160|Pnkp|59047|polynucleotide kinase 3'- phosphatase	NM_021549|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC047269|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK049992|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK172558|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC057659|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr14_-_66627993_66628046	0.625494	BPTF.p2	BC019856|Gulo|268756|gulonolactone (L-) oxidase	BC028822|Gulo|268756|gulonolactone (L-) oxidase	BC028828|Gulo|268756|gulonolactone (L-) oxidase	AK167460|Gulo|268756|gulonolactone (L-) oxidase	AK077740|Gulo|268756|gulonolactone (L-) oxidase	NM_178747|Gulo|268756|gulonolactone (L-) oxidase
mm9_v1_chr9_+_88734001_88734001	0.624283	BPTF.p2	NM_001177858|Trim43c|666731|tripartite motif-containing 43C
mm9_v1_chr6_-_113481340_113481484	0.623989	BPTF.p2	AK206599|Tmem111|66087|transmembrane protein 111	AK213319|Tmem111|66087|transmembrane protein 111	AK218418|Tmem111|66087|transmembrane protein 111	AK167819|Tmem111|66087|transmembrane protein 111
mm9_v1_chr10_-_3557441_3557947	0.623556	BPTF.p2	AY397681|Oprm1|18390|opioid receptor, mu 1	AF062754|Oprm1|18390|opioid receptor, mu 1	DQ363376|Oprm1|18390|opioid receptor, mu 1	DQ363377|Oprm1|18390|opioid receptor, mu 1	AB441734|Oprm1|18390|opioid receptor, mu 1	AB441735|Oprm1|18390|opioid receptor, mu 1	AB441736|Oprm1|18390|opioid receptor, mu 1	AB441737|Oprm1|18390|opioid receptor, mu 1	AB441738|Oprm1|18390|opioid receptor, mu 1	AB441739|Oprm1|18390|opioid receptor, mu 1	AB441740|Oprm1|18390|opioid receptor, mu 1	AB441741|Oprm1|18390|opioid receptor, mu 1	AB441742|Oprm1|18390|opioid receptor, mu 1	AB441743|Oprm1|18390|opioid receptor, mu 1	AK038389|Oprm1|18390|opioid receptor, mu 1	AF062753|Oprm1|18390|opioid receptor, mu 1	AF074973|Oprm1|18390|opioid receptor, mu 1	AF074974|Oprm1|18390|opioid receptor, mu 1	AF167565|Oprm1|18390|opioid receptor, mu 1	AF167566|Oprm1|18390|opioid receptor, mu 1	AF167567|Oprm1|18390|opioid receptor, mu 1	AF167568|Oprm1|18390|opioid receptor, mu 1	AF346812|Oprm1|18390|opioid receptor, mu 1	AF346813|Oprm1|18390|opioid receptor, mu 1	AF346814|Oprm1|18390|opioid receptor, mu 1	AY036621|Oprm1|18390|opioid receptor, mu 1	AY160190|Oprm1|18390|opioid receptor, mu 1	AY923181|Oprm1|18390|opioid receptor, mu 1	AY923183|Oprm1|18390|opioid receptor, mu 1	BC119545|Oprm1|18390|opioid receptor, mu 1	DQ868787|Oprm1|18390|opioid receptor, mu 1	DQ868788|Oprm1|18390|opioid receptor, mu 1	EF105311|Oprm1|18390|opioid receptor, mu 1	EF105312|Oprm1|18390|opioid receptor, mu 1	EF105313|Oprm1|18390|opioid receptor, mu 1	EF105314|Oprm1|18390|opioid receptor, mu 1	AY923182|Oprm1|18390|opioid receptor, mu 1	AB047546|Oprm1|18390|opioid receptor, mu 1	U19380|Oprm1|18390|opioid receptor, mu 1	NM_001039652|Oprm1|18390|opioid receptor, mu 1	U26915|Oprm1|18390|opioid receptor, mu 1
mm9_v1_chr11_-_106860803_106860838	0.623312	BPTF.p2	NM_010655|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr9_+_44887251_44887265	0.622821	BPTF.p2	NM_001005421|Amica1|270152|adhesion molecule, interacts with CXADR antigen 1
mm9_v1_chr5_+_137463234_137463356	0.622804	BPTF.p2	AK053320|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK013195|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK033360|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK157741|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr19_+_8840883_8840977	0.62273	BPTF.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr11_-_100957861_100957957	0.622357	BPTF.p2	
mm9_v1_chr2_+_116946505_116946906	0.621534	BPTF.p2	AK155070|Spred1|114715|sprouty protein with EVH-1 domain 1, related sequence	AK155065|Spred1|114715|sprouty protein with EVH-1 domain 1, related sequence
mm9_v1_chr15_+_57747523_57747567	0.621508	BPTF.p2	AK084542|Wdr67|210544|WD repeat domain 67
mm9_v1_chr4_-_45839668_45839705	0.621154	BPTF.p2	BC051960|Igfbpl1|75426|insulin-like growth factor binding protein-like 1	AB006141|Igfbpl1|75426|insulin-like growth factor binding protein-like 1	AK012705|Igfbpl1|75426|insulin-like growth factor binding protein-like 1	NM_018741|Igfbpl1|75426|insulin-like growth factor binding protein-like 1
mm9_v1_chr4_-_136913576_136913662	0.620631	BPTF.p2	U37720|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167195|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	BC064792|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167400|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168013|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168076|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168089|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168276|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169232|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK144216|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167609|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK003098|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK075567|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK145659|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK154870|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK166281|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK051543|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151726|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168820|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK150563|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168503|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169122|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169805|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151087|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK153564|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168758|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK159470|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	NM_009861|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr8_+_23048823_23048823	0.620339	BPTF.p2	AJ437650|Defb35|246084|defensin beta 35	NM_139224|Defb35|246084|defensin beta 35
mm9_v1_chr17_-_27341343_27341419	0.61897	BPTF.p2	AY640307|Lemd2|224640|LEM domain containing 2	AK143224|Lemd2|224640|LEM domain containing 2	NM_146075|Lemd2|224640|LEM domain containing 2
mm9_v1_chr4_+_101659444_101659444	0.617608	BPTF.p2	NM_001085520|Gm12789|381536|predicted gene 12789
mm9_v1_chr2_+_164286416_164286607	0.61705	BPTF.p2	AK007882|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_025575|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK139605|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK011753|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK003071|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK013220|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032073|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK009684|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075770|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005510|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK148305|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005249|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr1_-_135506760_135506767	0.616328	BPTF.p2	X65704|Snrpe|20643|small nuclear ribonucleoprotein E
mm9_v1_chr1_+_165860156_165860230	0.615925	BPTF.p2	AK004809|Scyl3|240880|SCY1-like 3 (S. cerevisiae)	BC043085|Scyl3|240880|SCY1-like 3 (S. cerevisiae)	NM_028776|Scyl3|240880|SCY1-like 3 (S. cerevisiae)	BC066800|Scyl3|240880|SCY1-like 3 (S. cerevisiae)
mm9_v1_chr7_-_109082300_109082407	0.615852	BPTF.p2	AK005758|Lrrc51|69358|leucine rich repeat containing 51	NM_001162973|Lrrc51|69358|leucine rich repeat containing 51	NM_027053|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr15_+_75799639_75799648	0.615697	BPTF.p2	BC026404|Zfp707|69020|zinc finger protein 707
mm9_v1_chr14_+_59820284_59820346	0.61431	BPTF.p2	AK017287|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr16_+_20717874_20717914	0.612522	BPTF.p2	AK146429|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	AK161617|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	BC002306|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	NM_145632|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	BC125612|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	BC125638|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H
mm9_v1_chr9_-_106349891_106349958	0.611872	BPTF.p2	AK003653|Abhd14a|68644|abhydrolase domain containing 14A	AB073619|Abhd14a|68644|abhydrolase domain containing 14A
mm9_v1_chr18_+_50287848_50287993	0.611506	BPTF.p2	AK004866|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK088381|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK147182|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK167060|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK166801|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK169077|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK152532|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK161655|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	BC022175|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	NM_008292|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	X89998|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4
mm9_v1_chr10_+_66648458_66648510	0.611168	BPTF.p2	AK087621|Jmjd1c|108829|jumonji domain containing 1C	AK170460|Jmjd1c|108829|jumonji domain containing 1C	AK135461|Jmjd1c|108829|jumonji domain containing 1C	AK085500|Jmjd1c|108829|jumonji domain containing 1C	AK133016|Jmjd1c|108829|jumonji domain containing 1C
mm9_v1_chr6_+_122657506_122657800	0.610175	BPTF.p2	AY455282|Nanog|71950|Nanog homeobox	AY455285|Nanog|71950|Nanog homeobox	BC132017|Nanog|71950|Nanog homeobox	BC137873|Nanog|71950|Nanog homeobox	BC144995|Nanog|71950|Nanog homeobox	BC144996|Nanog|71950|Nanog homeobox	NM_028016|Nanog|71950|Nanog homeobox	AF507043|Nanog|71950|Nanog homeobox	AB093574|Nanog|71950|Nanog homeobox	AK010332|Nanog|71950|Nanog homeobox	AK167259|Nanog|71950|Nanog homeobox	AY278951|Nanog|71950|Nanog homeobox	AB126939|Nanog|71950|Nanog homeobox	NM_001080945|Nanogpd|634428|Nanog homeobox related gene
mm9_v1_chr8_+_124967555_124967669	0.609926	BPTF.p2	AK049744|9330133O14Rik|319574|RIKEN cDNA 9330133O14 gene	AK042662|9330133O14Rik|319574|RIKEN cDNA 9330133O14 gene	AK085519|9330133O14Rik|319574|RIKEN cDNA 9330133O14 gene	AK033985|9330133O14Rik|319574|RIKEN cDNA 9330133O14 gene	BC094355|9330133O14Rik|319574|RIKEN cDNA 9330133O14 gene
mm9_v1_chr15_+_94374097_94374150	0.609377	BPTF.p2	BC051676|Irak4|266632|interleukin-1 receptor-associated kinase 4	AK139992|Irak4|266632|interleukin-1 receptor-associated kinase 4	AF445803|Irak4|266632|interleukin-1 receptor-associated kinase 4	AK028837|Irak4|266632|interleukin-1 receptor-associated kinase 4
mm9_v1_chr11_-_94834751_94834776	0.609346	BPTF.p2	AF019564|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	BC060287|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	AK009015|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	AK075915|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	NM_001136080|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)
mm9_v1_chr3_+_145784635_145784876	0.608307	BPTF.p2	AK030819|Mcoln3|171166|mucolipin 3	AK035029|Mcoln3|171166|mucolipin 3	AK033008|Mcoln3|171166|mucolipin 3	AF475086|Mcoln3|171166|mucolipin 3	BC106856|Mcoln3|171166|mucolipin 3	BC106857|Mcoln3|171166|mucolipin 3	NM_134160|Mcoln3|171166|mucolipin 3	AY083531|Mcoln3|171166|mucolipin 3	AK191060|Mcoln3|171166|mucolipin 3	AK202150|Mcoln3|171166|mucolipin 3
mm9_v1_chr5_-_100465086_100465197	0.607262	BPTF.p2	AK011143|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like
mm9_v1_chr17_-_57181018_57181076	0.607208	BPTF.p2	FM165286|Slc25a41|103775|solute carrier family 25, member 41	BC115588|Slc25a41|103775|solute carrier family 25, member 41	BC115589|Slc25a41|103775|solute carrier family 25, member 41	AK077111|Slc25a41|103775|solute carrier family 25, member 41	NM_175333|Slc25a41|103775|solute carrier family 25, member 41
mm9_v1_chr17_-_56323312_56323363	0.606892	BPTF.p2	AY038184|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	AK008854|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	AK018016|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	AK133947|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	AK008289|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	AK162834|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	AK004074|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	AK148083|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	NM_080837|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	BC132127|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed	BC132129|D17Wsu104e|28106|DNA segment, Chr 17, Wayne State University 104, expressed
mm9_v1_chrX_-_48559008_48559019	0.605718	BPTF.p2	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chr4_+_24825226_24825304	0.605415	BPTF.p2	NM_026742|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK160341|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK034728|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK019042|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	BC028764|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK003553|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
mm9_v1_chr5_-_138066184_138066305	0.604679	BPTF.p2	AK016870|Fbxo24|71176|F-box protein 24	NM_027708|Fbxo24|71176|F-box protein 24
mm9_v1_chr8_+_73118329_73118423	0.604069	BPTF.p2	AF288525|Isyna1|71780|myo-inositol 1-phosphate synthase A1	NM_023627|Isyna1|71780|myo-inositol 1-phosphate synthase A1	AK137089|Isyna1|71780|myo-inositol 1-phosphate synthase A1	BC003458|Isyna1|71780|myo-inositol 1-phosphate synthase A1	AK005029|Isyna1|71780|myo-inositol 1-phosphate synthase A1	AK079323|Isyna1|71780|myo-inositol 1-phosphate synthase A1
mm9_v1_chr14_+_56223363_56223415	0.603176	BPTF.p2	BC012968|Irf9|16391|interferon regulatory factor 9	NM_001159418|Irf9|16391|interferon regulatory factor 9
mm9_v1_chr7_-_107128967_107128967	0.602633	BPTF.p2	NM_175388|Rnf169|108937|ring finger protein 169
mm9_v1_chr10_-_127188787_127188853	0.601682	BPTF.p2	AK031480|Gpr182|11536|G protein-coupled receptor 182	NM_007412|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr2_+_158328317_158328347	0.599949	BPTF.p2	AY092026|Adig|246747|adipogenin	NM_145635|Adig|246747|adipogenin
mm9_v1_chr1_-_95698320_95698458	0.599512	BPTF.p2	AK210481|Dtymk|21915|deoxythymidylate kinase	AK019284|Dtymk|21915|deoxythymidylate kinase	BC030178|Dtymk|21915|deoxythymidylate kinase	S82852|Dtymk|21915|deoxythymidylate kinase	S82853|Dtymk|21915|deoxythymidylate kinase	AK011955|Dtymk|21915|deoxythymidylate kinase
mm9_v1_chr7_+_25688004_25688107	0.599175	BPTF.p2	NM_001130150|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	NM_001130151|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	NM_001130153|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	NM_008488|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK043027|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK012156|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK051518|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK040093|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK172354|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK157056|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	U58203|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK162482|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1	AK131181|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr14_+_73542316_73542336	0.599052	BPTF.p2	NM_001170694|Rcbtb2|105670|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	NM_134083|Rcbtb2|105670|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm9_v1_chr4_-_141154138_141154141	0.598589	BPTF.p2	AK010660|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr18_-_32297813_32297870	0.598128	BPTF.p2	AF318182|Proc|19123|protein C	BC013896|Proc|19123|protein C	NM_001042768|Proc|19123|protein C	NM_008934|Proc|19123|protein C
mm9_v1_chr8_+_74134884_74135109	0.595872	BPTF.p2	BC032165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK036165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	NM_146211|Glt25d1|234407|glycosyltransferase 25 domain containing 1	BC056951|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK035788|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK076103|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK029433|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK154775|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr11_-_49000546_49000590	0.595856	BPTF.p2	AY177687|Btnl9|237754|butyrophilin-like 9	BC025540|Btnl9|237754|butyrophilin-like 9	BC150808|Btnl9|237754|butyrophilin-like 9	BC151155|Btnl9|237754|butyrophilin-like 9	AK080918|Btnl9|237754|butyrophilin-like 9	AK084528|Btnl9|237754|butyrophilin-like 9	NM_172793|Btnl9|237754|butyrophilin-like 9
mm9_v1_chr8_+_4238718_4238771	0.594502	BPTF.p2	NM_001042557|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_001164172|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_011944|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022112|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022113|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr11_+_72904084_72904096	0.593911	BPTF.p2	U12236|Itgae|16407|integrin alpha E, epithelial-associated	AK040983|Itgae|16407|integrin alpha E, epithelial-associated	AK154021|Itgae|16407|integrin alpha E, epithelial-associated	BC150690|Itgae|16407|integrin alpha E, epithelial-associated	DQ386608|Itgae|16407|integrin alpha E, epithelial-associated	NM_008399|Itgae|16407|integrin alpha E, epithelial-associated	NM_172944|Itgae|16407|integrin alpha E, epithelial-associated
mm9_v1_chrX_-_151772899_151773055	0.59387	BPTF.p2	AK014651|Prdx4|53381|peroxiredoxin 4	AK029349|Prdx4|53381|peroxiredoxin 4	BC003349|Prdx4|53381|peroxiredoxin 4	AK005031|Prdx4|53381|peroxiredoxin 4	AK015920|Prdx4|53381|peroxiredoxin 4	AK152255|Prdx4|53381|peroxiredoxin 4	AK146402|Prdx4|53381|peroxiredoxin 4	NM_016764|Prdx4|53381|peroxiredoxin 4	U96746|Prdx4|53381|peroxiredoxin 4	BC019578|Prdx4|53381|peroxiredoxin 4	AK157829|Prdx4|53381|peroxiredoxin 4	AK165551|Prdx4|53381|peroxiredoxin 4
mm9_v1_chr11_-_29415005_29415037	0.593513	BPTF.p2	BC033930|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK085965|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK019442|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK077280|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	AK008574|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	BC115900|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	NM_001163454|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1	NM_026465|Prorsd1|67939|prolyl-tRNA synthetase domain containing 1
mm9_v1_chr6_-_148719426_148719561	0.593181	BPTF.p2	X67534|Ipo8|320727|importin 8
mm9_v1_chr9_+_120001250_120001250	0.591789	BPTF.p2	NM_007720|Ccr8|12776|chemokine (C-C motif) receptor 8	Z98205|Ccr8|12776|chemokine (C-C motif) receptor 8
mm9_v1_chr18_-_36926866_36926900	0.591574	BPTF.p2	
mm9_v1_chr11_-_52095745_52095751	0.590493	BPTF.p2	BC138596|Tcf7|21414|transcription factor 7, T-cell specific	BC145343|Tcf7|21414|transcription factor 7, T-cell specific	AK037616|Tcf7|21414|transcription factor 7, T-cell specific	NM_009331|Tcf7|21414|transcription factor 7, T-cell specific
mm9_v1_chr5_-_23953594_23953663	0.59039	BPTF.p2	AY603379|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AK008109|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	BC019547|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AB030183|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	NM_022418|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1
mm9_v1_chr6_-_115944822_115945034	0.589887	BPTF.p2	AY688678|Plxnd1|67784|plexin D1	AK147513|Plxnd1|67784|plexin D1	NM_026376|Plxnd1|67784|plexin D1
mm9_v1_chr8_+_4238838_4238860	0.589379	BPTF.p2	AK049267|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr9_-_118059275_118059324	0.588838	BPTF.p2	AK008567|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	BC048547|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr10_+_80586394_80586698	0.588606	BPTF.p2	AK140101|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK192399|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK202988|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK212487|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK216389|Map2k2|26396|mitogen-activated protein kinase kinase 2
mm9_v1_chr1_-_196957694_196957780	0.587568	BPTF.p2	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr15_-_74686747_74686747	0.587509	BPTF.p2	BC116908|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	BC119321|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	NM_009991|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2
mm9_v1_chr7_+_26074512_26074540	0.587469	BPTF.p2	AK082152|Cic|71722|capicua homolog (Drosophila)
mm9_v1_chr17_-_13185043_13185130	0.586752	BPTF.p2	BC046416|Wtap|60532|Wilms' tumour 1-associating protein	BC047338|Wtap|60532|Wilms' tumour 1-associating protein	BC093504|Wtap|60532|Wilms' tumour 1-associating protein	NM_001113532|Wtap|60532|Wilms' tumour 1-associating protein	NM_001113533|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr12_-_119539909_119539930	0.586391	BPTF.p2	NM_001166385|Sp4|20688|trans-acting transcription factor 4	NM_009239|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr2_+_11564418_11564614	0.586046	BPTF.p2	NM_008367|Il2ra|16184|interleukin 2 receptor, alpha chain	AK037369|Il2ra|16184|interleukin 2 receptor, alpha chain	AK041350|Il2ra|16184|interleukin 2 receptor, alpha chain	AK088594|Il2ra|16184|interleukin 2 receptor, alpha chain	AK168113|Il2ra|16184|interleukin 2 receptor, alpha chain	AK171665|Il2ra|16184|interleukin 2 receptor, alpha chain	M30856|Il2ra|16184|interleukin 2 receptor, alpha chain	BC114437|Il2ra|16184|interleukin 2 receptor, alpha chain	K02891|Il2ra|16184|interleukin 2 receptor, alpha chain	M54934|Il2ra|16184|interleukin 2 receptor, alpha chain
mm9_v1_chr17_+_33130067_33130141	0.585927	BPTF.p2	AK050612|Zfp952|240067|zinc finger protein 952	BC057593|Zfp952|240067|zinc finger protein 952	NM_001045559|Zfp952|240067|zinc finger protein 952	BC051011|Zfp952|240067|zinc finger protein 952
mm9_v1_chr7_-_138553991_138554026	0.585891	BPTF.p2	BC048183|Ikzf5|67143|IKAROS family zinc finger 5	BC058537|Ikzf5|67143|IKAROS family zinc finger 5	NM_175115|Ikzf5|67143|IKAROS family zinc finger 5	AK153883|Ikzf5|67143|IKAROS family zinc finger 5	AK033716|Ikzf5|67143|IKAROS family zinc finger 5	BC089455|Ikzf5|67143|IKAROS family zinc finger 5	AK169384|Ikzf5|67143|IKAROS family zinc finger 5
mm9_v1_chr10_+_79635688_79635690	0.58587	BPTF.p2	AK005397|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	AK168176|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	NM_027207|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	AK050606|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	BC146018|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	BC146020|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene
mm9_v1_chr8_+_63369202_63369282	0.585196	BPTF.p2	AK151754|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	BC042740|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	NM_028299|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	AK150453|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	AK157260|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene	AK012304|2700029M09Rik|72612|RIKEN cDNA 2700029M09 gene
mm9_v1_chr5_-_140212063_140212302	0.584833	BPTF.p2	AK220308|Micall2|231830|MICAL-like 2	AK165558|Micall2|231830|MICAL-like 2	AB182579|Micall2|231830|MICAL-like 2	AK044547|Micall2|231830|MICAL-like 2	AK085948|Micall2|231830|MICAL-like 2	AK164043|Micall2|231830|MICAL-like 2	AK151086|Micall2|231830|MICAL-like 2	NM_174850|Micall2|231830|MICAL-like 2
mm9_v1_chr6_-_47763309_47763428	0.583498	BPTF.p2	AK168447|Pdia4|12304|protein disulfide isomerase associated 4	AK161534|Pdia4|12304|protein disulfide isomerase associated 4	AK146288|Pdia4|12304|protein disulfide isomerase associated 4	AK169387|Pdia4|12304|protein disulfide isomerase associated 4	AK028292|Pdia4|12304|protein disulfide isomerase associated 4	AK150566|Pdia4|12304|protein disulfide isomerase associated 4	J05186|Pdia4|12304|protein disulfide isomerase associated 4	BC141078|Pdia4|12304|protein disulfide isomerase associated 4	AK148801|Pdia4|12304|protein disulfide isomerase associated 4
mm9_v1_chr12_-_106236886_106236886	0.583464	BPTF.p2	BC099694|4831426I19Rik|212073|RIKEN cDNA 4831426I19 gene	NM_001042699|4831426I19Rik|212073|RIKEN cDNA 4831426I19 gene
mm9_v1_chr9_+_56958585_56958640	0.582721	BPTF.p2	AK136972|Sin3a|20466|transcriptional regulator, SIN3A (yeast)
mm9_v1_chr10_-_128258639_128258702	0.582494	BPTF.p2	AK002824|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK002583|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK013455|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	BC002146|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	NM_024180|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)
mm9_v1_chr10_+_80611198_80611320	0.581069	BPTF.p2	AK078088|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr5_+_122822505_122822541	0.580704	BPTF.p2	BC003341|Gpn3|68080|GPN-loop GTPase 3	NM_024216|Gpn3|68080|GPN-loop GTPase 3
mm9_v1_chr19_-_44181897_44181978	0.580393	BPTF.p2	AK035326|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	U12473|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK150039|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK165275|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK018671|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155328|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	BC018243|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155393|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK164236|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_001162410|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_007700|Chuk|12675|conserved helix-loop-helix ubiquitous kinase
mm9_v1_chr16_-_17680714_17680799	0.579832	BPTF.p2	AK188163|Med15|94112|mediator complex subunit 15	AK207958|Med15|94112|mediator complex subunit 15	BC049891|Med15|94112|mediator complex subunit 15
mm9_v1_chr3_+_142428186_142428231	0.578765	BPTF.p2	AK146223|Gtf2b|229906|general transcription factor IIB	AK131856|Gtf2b|229906|general transcription factor IIB	AK133097|Gtf2b|229906|general transcription factor IIB	AK133825|Gtf2b|229906|general transcription factor IIB	AK143935|Gtf2b|229906|general transcription factor IIB	AK145403|Gtf2b|229906|general transcription factor IIB	AK146666|Gtf2b|229906|general transcription factor IIB	AK146910|Gtf2b|229906|general transcription factor IIB	AK151577|Gtf2b|229906|general transcription factor IIB	BC016637|Gtf2b|229906|general transcription factor IIB	NM_145546|Gtf2b|229906|general transcription factor IIB
mm9_v1_chr18_+_24148132_24148185	0.57827	BPTF.p2	AK132703|Zfp35|22694|zinc finger protein 35	NM_011755|Zfp35|22694|zinc finger protein 35	AK159080|Zfp35|22694|zinc finger protein 35	X17617|Zfp35|22694|zinc finger protein 35
mm9_v1_chr3_-_89802501_89802651	0.578113	BPTF.p2	AF465243|Hax1|23897|HCLS1 associated X-1	BC006688|Hax1|23897|HCLS1 associated X-1	BC147481|Hax1|23897|HCLS1 associated X-1	BC098225|Hax1|23897|HCLS1 associated X-1	AK002256|Hax1|23897|HCLS1 associated X-1	AK135138|Hax1|23897|HCLS1 associated X-1	AF023482|Hax1|23897|HCLS1 associated X-1	AF023483|Hax1|23897|HCLS1 associated X-1	NM_011826|Hax1|23897|HCLS1 associated X-1	AK010633|Hax1|23897|HCLS1 associated X-1	AK088746|Hax1|23897|HCLS1 associated X-1
mm9_v1_chr6_-_39156609_39156661	0.578073	BPTF.p2	AK136209|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145216|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145848|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr1_-_182743632_182743738	0.578031	BPTF.p2	BC106177|H3f3a|15078|H3 histone, family 3A	BC088835|H3f3a|15078|H3 histone, family 3A	BC012687|H3f3a|15078|H3 histone, family 3A	BC083353|H3f3a|15078|H3 histone, family 3A	BC002268|H3f3a|15078|H3 histone, family 3A	Z85979|H3f3a|15078|H3 histone, family 3A	AK152293|H3f3a|15078|H3 histone, family 3A	AK150591|H3f3a|15078|H3 histone, family 3A	AK150928|H3f3a|15078|H3 histone, family 3A	AK160635|H3f3a|15078|H3 histone, family 3A	AK169608|H3f3a|15078|H3 histone, family 3A	AK162040|H3f3a|15078|H3 histone, family 3A	AK153034|H3f3a|15078|H3 histone, family 3A	AK160677|H3f3a|15078|H3 histone, family 3A	AK167879|H3f3a|15078|H3 histone, family 3A	AK168197|H3f3a|15078|H3 histone, family 3A	AK150467|H3f3a|15078|H3 histone, family 3A	AK150468|H3f3a|15078|H3 histone, family 3A	AK151634|H3f3a|15078|H3 histone, family 3A	AK037900|H3f3a|15078|H3 histone, family 3A	NM_008210|H3f3a|15078|H3 histone, family 3A
mm9_v1_chr15_+_35860580_35860704	0.577646	BPTF.p2	AK007749|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr4_-_34754469_34754554	0.577361	BPTF.p2	AB221605|Zfp292|30046|zinc finger protein 292
mm9_v1_chr14_-_56262642_56262642	0.576497	BPTF.p2	AK004754|Tm9sf1|74140|transmembrane 9 superfamily member 1	NM_028780|Tm9sf1|74140|transmembrane 9 superfamily member 1
mm9_v1_chr11_+_102297953_102298100	0.576437	BPTF.p2	
mm9_v1_chr13_+_97408920_97408964	0.576141	BPTF.p2	AK020301|Col4a3bp|68018|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm9_v1_chr13_+_120251565_120251614	0.576086	BPTF.p2	AK008565|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_001113550|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_026127|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008588|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK149119|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK020163|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK146515|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK014735|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC021327|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK017802|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK160863|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008746|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC028328|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK215837|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene
mm9_v1_chr2_-_104689616_104690006	0.575108	BPTF.p2	AK166405|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC115470|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK035530|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC099390|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK037087|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151011|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151019|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK038703|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_178695|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm9_v1_chr17_+_25270317_25270453	0.574052	BPTF.p2	AK030444|Clcn7|26373|chloride channel 7	NM_011930|Clcn7|26373|chloride channel 7	BC054799|Clcn7|26373|chloride channel 7	BC050907|Clcn7|26373|chloride channel 7	BC053049|Clcn7|26373|chloride channel 7	AK128981|Clcn7|26373|chloride channel 7
mm9_v1_chr11_+_98769122_98769151	0.573751	BPTF.p2	AK166003|Cdc6|23834|cell division cycle 6 homolog (S. cerevisiae)
mm9_v1_chr6_-_115684968_115684968	0.573523	BPTF.p2	AK078864|Tmem40|94346|transmembrane protein 40	NM_001168259|Tmem40|94346|transmembrane protein 40
mm9_v1_chr1_-_95202420_95202472	0.573499	BPTF.p2	AK007901|Mterfd2|69821|MTERF domain containing 2	BC064709|Mterfd2|69821|MTERF domain containing 2	AK079098|Mterfd2|69821|MTERF domain containing 2	AK077142|Mterfd2|69821|MTERF domain containing 2	NM_178051|Mterfd2|69821|MTERF domain containing 2	AK033043|Mterfd2|69821|MTERF domain containing 2
mm9_v1_chr3_-_80606500_80606592	0.572823	BPTF.p2	BC066193|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	X57498|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	BC048248|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr3_+_54539460_54539519	0.572332	BPTF.p2	AK005296|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)	NM_025442|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)	AK003818|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)	AK161187|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)	AK030567|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)	AK006206|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)	AK011159|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)	BC027160|Alg5|66248|asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)
mm9_v1_chr9_-_37421173_37421309	0.571843	BPTF.p2	AK005571|Spa17|20686|sperm autoantigenic protein 17	BC059727|Spa17|20686|sperm autoantigenic protein 17	NM_011449|Spa17|20686|sperm autoantigenic protein 17	Z46299|Spa17|20686|sperm autoantigenic protein 17
mm9_v1_chr7_+_19946564_19946602	0.571182	BPTF.p2	AK170535|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	NM_001010836|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	AK146098|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	AY869711|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm9_v1_chr6_-_130336891_130336991	0.571173	BPTF.p2	AY078436|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	NM_016659|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF419250|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF444273|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1
mm9_v1_chr15_-_98373055_98373058	0.570686	BPTF.p2	AK085131|Ccnt1|12455|cyclin T1	AK052836|Ccnt1|12455|cyclin T1
mm9_v1_chr6_-_97010364_97010406	0.56993	BPTF.p2	BC089490|Fam19a4|320701|family with sequence similarity 19, member A4	AK081531|Fam19a4|320701|family with sequence similarity 19, member A4	AK084114|Fam19a4|320701|family with sequence similarity 19, member A4	NM_177233|Fam19a4|320701|family with sequence similarity 19, member A4	AK149355|Fam19a4|320701|family with sequence similarity 19, member A4
mm9_v1_chr7_+_147222289_147222346	0.569892	BPTF.p2	NM_027201|Zfp511|69752|zinc finger protein 511	AK010407|Zfp511|69752|zinc finger protein 511
mm9_v1_chr4_+_154927385_154927543	0.568681	BPTF.p2	BC003294|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr7_-_51745554_51745568	0.568496	BPTF.p2	
mm9_v1_chr6_-_124838150_124838229	0.568437	BPTF.p2	AK161775|Cd4|12504|CD4 antigen	BC039137|Cd4|12504|CD4 antigen	AK040115|Cd4|12504|CD4 antigen	AK153707|Cd4|12504|CD4 antigen	AK153966|Cd4|12504|CD4 antigen	NM_013488|Cd4|12504|CD4 antigen	X04836|Cd4|12504|CD4 antigen
mm9_v1_chr4_+_41082993_41083094	0.567715	BPTF.p2	AK003550|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AK075703|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	BC011112|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AK075714|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	NM_026275|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2	AJ240086|Ube2r2|67615|ubiquitin-conjugating enzyme E2R 2
mm9_v1_chr14_+_52473672_52473672	0.567533	BPTF.p2	NM_017385|Ear7|53873|eosinophil-associated, ribonuclease A family, member 7
mm9_v1_chr12_-_114665550_114665585	0.567456	BPTF.p2	AK134155|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr12_-_76815494_76815519	0.567179	BPTF.p2	
mm9_v1_chr18_+_56722222_56722222	0.5671	BPTF.p2	AK016958|Phax|56698|phosphorylated adaptor for RNA export	NM_001162989|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr9_-_78327171_78327201	0.566714	BPTF.p2	AK183068|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK185520|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK194927|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK196726|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK204373|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK208452|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK217934|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr19_-_55291933_55291946	0.566171	BPTF.p2	AK049940|Gucy2g|73707|guanylate cyclase 2g
mm9_v1_chr13_+_41096549_41096687	0.565842	BPTF.p2	AY030406|Pak1ip1|68083|PAK1 interacting protein 1	AK002852|Pak1ip1|68083|PAK1 interacting protein 1	BC024629|Pak1ip1|68083|PAK1 interacting protein 1	AK150747|Pak1ip1|68083|PAK1 interacting protein 1	AK150919|Pak1ip1|68083|PAK1 interacting protein 1	AK077941|Pak1ip1|68083|PAK1 interacting protein 1	AK135946|Pak1ip1|68083|PAK1 interacting protein 1	BC060371|Pak1ip1|68083|PAK1 interacting protein 1	BC018522|Pak1ip1|68083|PAK1 interacting protein 1	BC116729|Pak1ip1|68083|PAK1 interacting protein 1	BC116731|Pak1ip1|68083|PAK1 interacting protein 1
mm9_v1_chr15_-_59205688_59205750	0.563938	BPTF.p2	BC067035|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene	NM_153548|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene	AK128970|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene
mm9_v1_chr17_-_24580867_24580878	0.562679	BPTF.p2	AK178081|E4f1|13560|E4F transcription factor 1
mm9_v1_chrX_+_6644644_6644708	0.562598	BPTF.p2	NM_009651|Akap4|11643|A kinase (PRKA) anchor protein 4	U10341|Akap4|11643|A kinase (PRKA) anchor protein 4	BC130271|Akap4|11643|A kinase (PRKA) anchor protein 4
mm9_v1_chr4_-_147808800_147808920	0.5619	BPTF.p2	
mm9_v1_chr7_-_106632113_106632218	0.561088	BPTF.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr16_+_20611637_20611755	0.560918	BPTF.p2	AK007407|Ece2|107522|endothelin converting enzyme 2	AK007791|Ece2|107522|endothelin converting enzyme 2	BC115541|Ece2|107522|endothelin converting enzyme 2	BC115542|Ece2|107522|endothelin converting enzyme 2	NM_025462|Ece2|107522|endothelin converting enzyme 2	NM_177940|Ece2|107522|endothelin converting enzyme 2	NM_177941|Ece2|107522|endothelin converting enzyme 2
mm9_v1_chr14_-_56143027_56143052	0.56088	BPTF.p2	L14935|Nrl|18185|neural retina leucine zipper gene	NM_008736|Nrl|18185|neural retina leucine zipper gene	AK044275|Nrl|18185|neural retina leucine zipper gene
mm9_v1_chr4_-_143040204_143040226	0.560354	BPTF.p2	AY573564|Oog4|242737|oogenesin 4	NM_173773|Oog4|242737|oogenesin 4	BC053722|Oog4|242737|oogenesin 4	BC098485|Oog4|242737|oogenesin 4	AK054346|Oog4|242737|oogenesin 4
mm9_v1_chr13_+_8202111_8202186	0.559443	BPTF.p2	AK134964|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK051460|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK043249|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139079|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139273|Adarb2|94191|adenosine deaminase, RNA-specific, B2	NM_052977|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC059822|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK046083|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK033916|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK045538|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC052426|Adarb2|94191|adenosine deaminase, RNA-specific, B2
mm9_v1_chr12_-_70576533_70576536	0.559398	BPTF.p2	AK039829|5830428M24Rik|76062|RIKEN cDNA 5830428M24 gene	AK017954|5830428M24Rik|76062|RIKEN cDNA 5830428M24 gene
mm9_v1_chr12_-_89420210_89420337	0.558422	BPTF.p2	BC094894|Gm10436|100039315|predicted gene 10436	AK139576|Gm10436|100039315|predicted gene 10436	NM_001105254|Gm10436|100039315|predicted gene 10436
mm9_v1_chr11_+_69139759_69139835	0.558134	BPTF.p2	AK049316|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK083134|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	NM_010599|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK046194|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK031806|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	AK044102|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3	BC017518|Kcnab3|16499|potassium voltage-gated channel, shaker-related subfamily, beta member 3
mm9_v1_chr4_+_126698539_126698547	0.557193	BPTF.p2	NM_023603|Sfpq|71514|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm9_v1_chr7_+_134985164_134985421	0.556907	BPTF.p2	AK145909|Stx4a|20909|syntaxin 4A (placental)	BC011491|Stx4a|20909|syntaxin 4A (placental)	NM_009294|Stx4a|20909|syntaxin 4A (placental)	AK161971|Stx4a|20909|syntaxin 4A (placental)	BC052023|Stx4a|20909|syntaxin 4A (placental)
mm9_v1_chr9_-_15110567_15110606	0.556485	BPTF.p2	AK016432|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	AK088123|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	AK147073|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr8_+_73895221_73895251	0.554697	BPTF.p2	AK155219|Ocel1|77090|occludin/ELL domain containing 1	AK143433|Ocel1|77090|occludin/ELL domain containing 1	BC019407|Ocel1|77090|occludin/ELL domain containing 1
mm9_v1_chr18_+_35750406_35750586	0.554676	BPTF.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chr13_-_61037960_61037985	0.554543	BPTF.p2	NM_007796|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha
mm9_v1_chr10_+_127691166_127691233	0.554512	BPTF.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr11_+_19824835_19824933	0.554508	BPTF.p2	AB063496|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr9_-_80359017_80359087	0.552064	BPTF.p2	AF229929|Impg1|63859|interphotoreceptor matrix proteoglycan 1	BC022970|Impg1|63859|interphotoreceptor matrix proteoglycan 1	AK020862|Impg1|63859|interphotoreceptor matrix proteoglycan 1	NM_022016|Impg1|63859|interphotoreceptor matrix proteoglycan 1	AF266478|Impg1|63859|interphotoreceptor matrix proteoglycan 1
mm9_v1_chr9_+_108294086_108294331	0.551907	BPTF.p2	AK193942|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK188202|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK181180|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)
mm9_v1_chr15_+_57743727_57743856	0.551488	BPTF.p2	NM_001081396|Wdr67|210544|WD repeat domain 67	NM_001167679|Wdr67|210544|WD repeat domain 67	AB185844|Wdr67|210544|WD repeat domain 67	AK154264|Wdr67|210544|WD repeat domain 67	AK171024|Wdr67|210544|WD repeat domain 67	BC050039|Wdr67|210544|WD repeat domain 67	BC066830|Wdr67|210544|WD repeat domain 67
mm9_v1_chr18_-_52689469_52689476	0.551432	BPTF.p2	AK166442|Lox|16948|lysyl oxidase
mm9_v1_chr14_-_51544362_51544454	0.550638	BPTF.p2	AK145181|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr9_-_86465373_86465470	0.55006	BPTF.p2	BC138700|Pgm3|109785|phosphoglucomutase 3	AK051706|Pgm3|109785|phosphoglucomutase 3	AK032776|Pgm3|109785|phosphoglucomutase 3	AK049337|Pgm3|109785|phosphoglucomutase 3	AK169141|Pgm3|109785|phosphoglucomutase 3	AK169082|Pgm3|109785|phosphoglucomutase 3	AK169787|Pgm3|109785|phosphoglucomutase 3	AK165513|Pgm3|109785|phosphoglucomutase 3	AK013402|Pgm3|109785|phosphoglucomutase 3	AK036561|Pgm3|109785|phosphoglucomutase 3	AK049758|Pgm3|109785|phosphoglucomutase 3	AK028066|Pgm3|109785|phosphoglucomutase 3	AK160913|Pgm3|109785|phosphoglucomutase 3	AK043547|Pgm3|109785|phosphoglucomutase 3	NM_001163746|Pgm3|109785|phosphoglucomutase 3	NM_028352|Pgm3|109785|phosphoglucomutase 3
mm9_v1_chrX_-_35988279_35988319	0.548878	BPTF.p2	BC029909|C1galt1c1|59048|C1GALT1-specific chaperone 1	NM_021550|C1galt1c1|59048|C1GALT1-specific chaperone 1
mm9_v1_chr8_-_114045980_114046012	0.548024	BPTF.p2	BC066082|Wdr59|319481|WD repeat domain 59	EF011622|Wdr59|319481|WD repeat domain 59	AK170910|Wdr59|319481|WD repeat domain 59	NM_001170742|Wdr59|319481|WD repeat domain 59	NM_001170743|Wdr59|319481|WD repeat domain 59	NM_176923|Wdr59|319481|WD repeat domain 59
mm9_v1_chr11_-_17111513_17111579	0.547962	BPTF.p2	AK165942|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK007324|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009146|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009896|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK017153|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	BC020037|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AF349950|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)
mm9_v1_chr13_+_34056507_34056641	0.547688	BPTF.p2	NM_001163239|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	NM_001163241|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	NM_020282|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK008138|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK008465|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK010842|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK049781|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	BC027629|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2
mm9_v1_chr11_+_95610380_95610380	0.546839	BPTF.p2	BC055752|Zfp652|268469|zinc finger protein 652	NM_201609|Zfp652|268469|zinc finger protein 652
mm9_v1_chr1_-_146024404_146024501	0.546747	BPTF.p2	AF498319|Rgs13|246709|regulator of G-protein signaling 13	BC049624|Rgs13|246709|regulator of G-protein signaling 13	AK043268|Rgs13|246709|regulator of G-protein signaling 13	NM_153171|Rgs13|246709|regulator of G-protein signaling 13
mm9_v1_chr6_+_146798631_146798631	0.546693	BPTF.p2	AK006257|1700023A16Rik|69371|RIKEN cDNA 1700023A16 gene	NM_027059|1700023A16Rik|69371|RIKEN cDNA 1700023A16 gene
mm9_v1_chr5_-_86601802_86601829	0.546483	BPTF.p2	AK049603|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr1_-_93295259_93295297	0.546096	BPTF.p2	BC027439|Ilkap|67444|integrin-linked kinase-associated serine/threonine phosphatase 2C
mm9_v1_chr2_+_40412520_40412541	0.545833	BPTF.p2	AK196468|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK210662|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr6_-_115685120_115685120	0.544543	BPTF.p2	NM_001168258|Tmem40|94346|transmembrane protein 40
mm9_v1_chr19_-_39961258_39961288	0.543233	BPTF.p2	NM_001104525|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69	BC145630|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69
mm9_v1_chr16_+_45093816_45093826	0.542994	BPTF.p2	BC096487|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr9_+_8544141_8544270	0.542793	BPTF.p2	NM_013838|Trpc6|22068|transient receptor potential cation channel, subfamily C, member 6	U49069|Trpc6|22068|transient receptor potential cation channel, subfamily C, member 6	AK086446|Trpc6|22068|transient receptor potential cation channel, subfamily C, member 6	BC067391|Trpc6|22068|transient receptor potential cation channel, subfamily C, member 6	BC068310|Trpc6|22068|transient receptor potential cation channel, subfamily C, member 6	AK133864|Trpc6|22068|transient receptor potential cation channel, subfamily C, member 6	BC141131|Trpc6|22068|transient receptor potential cation channel, subfamily C, member 6
mm9_v1_chr8_-_8690519_8690552	0.542705	BPTF.p2	BC046971|Arglu1|234023|arginine and glutamate rich 1	NM_176849|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr11_+_116395281_116395465	0.542493	BPTF.p2	AK136289|Sphk1|20698|sphingosine kinase 1	AK197304|Sphk1|20698|sphingosine kinase 1
mm9_v1_chr2_-_89892475_89892478	0.542141	BPTF.p2	BC111111|Olfr140|57272|olfactory receptor 140	BC141888|Olfr140|57272|olfactory receptor 140	NM_020515|Olfr140|57272|olfactory receptor 140
mm9_v1_chr4_-_120498198_120498325	0.541181	BPTF.p2	AK156353|Nfyc|18046|nuclear transcription factor-Y gamma	BC020117|Nfyc|18046|nuclear transcription factor-Y gamma	BC085261|Nfyc|18046|nuclear transcription factor-Y gamma	AK011327|Nfyc|18046|nuclear transcription factor-Y gamma	NM_008692|Nfyc|18046|nuclear transcription factor-Y gamma
mm9_v1_chr19_+_12502394_12502461	0.541175	BPTF.p2	NM_019540|Pfpl|56093|pore forming protein-like	AF250839|Pfpl|56093|pore forming protein-like	BC052215|Pfpl|56093|pore forming protein-like	AK141262|Pfpl|56093|pore forming protein-like
mm9_v1_chr9_+_64129387_64129441	0.540844	BPTF.p2	AK038111|Tipin|66131|timeless interacting protein	AK003451|Tipin|66131|timeless interacting protein	AK003802|Tipin|66131|timeless interacting protein	AK011357|Tipin|66131|timeless interacting protein	NM_025372|Tipin|66131|timeless interacting protein	BC016211|Tipin|66131|timeless interacting protein
mm9_v1_chr19_+_3767420_3767525	0.540608	BPTF.p2	AK083227|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167884|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167885|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167886|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167887|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167888|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_001167889|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	NM_144871|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)	AK087267|Suv420h1|225888|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm9_v1_chr15_-_96529121_96529237	0.540424	BPTF.p2	AK164568|Slc38a2|67760|solute carrier family 38, member 2	AK018767|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr7_-_19942264_19942376	0.538992	BPTF.p2	AK075701|Cd3eap|70333|CD3E antigen, epsilon polypeptide associated protein
mm9_v1_chr1_+_129702056_129702170	0.538876	BPTF.p2	AK033697|Ccnt2|72949|cyclin T2
mm9_v1_chr7_-_134160864_134160869	0.538779	BPTF.p2	BC003932|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene	NM_030240|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr7_+_128219633_128219975	0.538676	BPTF.p2	AK003378|Mettl9|59052|methyltransferase like 9	AK194757|Mettl9|59052|methyltransferase like 9	AK206305|Mettl9|59052|methyltransferase like 9	AK208785|Mettl9|59052|methyltransferase like 9	AK209460|Mettl9|59052|methyltransferase like 9	AK211016|Mettl9|59052|methyltransferase like 9	AK212761|Mettl9|59052|methyltransferase like 9	AK216310|Mettl9|59052|methyltransferase like 9	AK218040|Mettl9|59052|methyltransferase like 9	AK196516|Mettl9|59052|methyltransferase like 9	AK199334|Mettl9|59052|methyltransferase like 9	AK212785|Mettl9|59052|methyltransferase like 9
mm9_v1_chr15_+_75799711_75799736	0.538499	BPTF.p2	AK005330|Zfp707|69020|zinc finger protein 707	AK153958|Zfp707|69020|zinc finger protein 707
mm9_v1_chr16_+_59148654_59148677	0.538372	BPTF.p2	BC119110|Olfr195|259000|olfactory receptor 195	NM_146998|Olfr195|259000|olfactory receptor 195
mm9_v1_chr3_-_63733305_63733317	0.537965	BPTF.p2	AK087526|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	NM_177856|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chrX_+_7455387_7455511	0.537933	BPTF.p2	AK043570|Pim2|18715|proviral integration site 2	L41495|Pim2|18715|proviral integration site 2	NM_138606|Pim2|18715|proviral integration site 2	BC027376|Pim2|18715|proviral integration site 2
mm9_v1_chr19_+_5493612_5493771	0.537602	BPTF.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr10_-_128241425_128241425	0.53713	BPTF.p2	BC037624|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene	NM_178066|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene
mm9_v1_chr4_-_150283917_150284029	0.537072	BPTF.p2	BC002187|Park7|57320|Parkinson disease (autosomal recessive, early onset) 7	AK146368|Park7|57320|Parkinson disease (autosomal recessive, early onset) 7	AB015652|Park7|57320|Parkinson disease (autosomal recessive, early onset) 7	AK168341|Park7|57320|Parkinson disease (autosomal recessive, early onset) 7	AK153948|Park7|57320|Parkinson disease (autosomal recessive, early onset) 7	NM_020569|Park7|57320|Parkinson disease (autosomal recessive, early onset) 7
mm9_v1_chr9_-_57468501_57468580	0.537022	BPTF.p2	AB211986|Lman1l|235416|lectin, mannose-binding 1 like	BC020188|Lman1l|235416|lectin, mannose-binding 1 like	NM_199222|Lman1l|235416|lectin, mannose-binding 1 like
mm9_v1_chr7_-_107731579_107731643	0.536342	BPTF.p2	AK077636|Mrpl48|52443|mitochondrial ribosomal protein L48	BC037190|Mrpl48|52443|mitochondrial ribosomal protein L48	AK019161|Mrpl48|52443|mitochondrial ribosomal protein L48	AK171917|Mrpl48|52443|mitochondrial ribosomal protein L48	NM_198831|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr9_+_54758322_54758381	0.535169	BPTF.p2	AK038058|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chrX_-_57400778_57400876	0.535028	BPTF.p2	BC125435|Mcf2|109904|mcf.2 transforming sequence	AB052945|Mcf2|109904|mcf.2 transforming sequence	AB101616|Mcf2|109904|mcf.2 transforming sequence	NM_133197|Mcf2|109904|mcf.2 transforming sequence	AK032122|Mcf2|109904|mcf.2 transforming sequence
mm9_v1_chr8_+_4238780_4238837	0.534439	BPTF.p2	AK165184|Map2k7|26400|mitogen-activated protein kinase kinase 7	BC070467|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060944|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060945|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060946|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF060947|Map2k7|26400|mitogen-activated protein kinase kinase 7	AK031137|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr9_+_69843263_69843284	0.533912	BPTF.p2	AF400107|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591757|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591758|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_001008238|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr12_+_72149332_72149349	0.533556	BPTF.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr11_+_85413817_85413884	0.533307	BPTF.p2	AK078571|7030407E18Rik|399600|RIKEN cDNA 7030407E18 gene
mm9_v1_chr7_+_129776837_129777102	0.533059	BPTF.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr2_-_35959513_35959579	0.532841	BPTF.p2	BC065077|Lhx6|16874|LIM homeobox protein 6	AB031039|Lhx6|16874|LIM homeobox protein 6	AB031040|Lhx6|16874|LIM homeobox protein 6	NM_001083126|Lhx6|16874|LIM homeobox protein 6	NM_001083127|Lhx6|16874|LIM homeobox protein 6
mm9_v1_chr4_+_146506201_146506201	0.5327	BPTF.p2	BC024323|Gm13139|666532|predicted gene 13139	NM_001083918|Gm13139|666532|predicted gene 13139
mm9_v1_chr7_+_26958427_26958451	0.531867	BPTF.p2	NM_010000|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9	BC120527|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9	BC120525|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9	M21855|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9
mm9_v1_chr14_-_69860882_69860941	0.531819	BPTF.p2	BC019514|Slc25a37|67712|solute carrier family 25, member 37
mm9_v1_chr10_-_118293979_118293989	0.531564	BPTF.p2	AK007736|Dyrk2|69181|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm9_v1_chrX_+_7418894_7418995	0.531223	BPTF.p2	BC016529|Otud5|54644|OTU domain containing 5	NM_138604|Otud5|54644|OTU domain containing 5	AK155131|Otud5|54644|OTU domain containing 5
mm9_v1_chr4_+_62626582_62626639	0.53087	BPTF.p2	NM_028326|Zfp618|72701|zinc fingerprotein 618	AK012848|Zfp618|72701|zinc fingerprotein 618
mm9_v1_chr4_-_48217142_48217157	0.530835	BPTF.p2	AK214712|Erp44|76299|endoplasmic reticulum protein 44	AK206483|Erp44|76299|endoplasmic reticulum protein 44
mm9_v1_chr6_+_108015037_108015048	0.530679	BPTF.p2	AK017895|Setmar|74729|SET domain and mariner transposase fusion gene	NM_178391|Setmar|74729|SET domain and mariner transposase fusion gene	BC045208|Setmar|74729|SET domain and mariner transposase fusion gene
mm9_v1_chr11_+_70338927_70338937	0.529882	BPTF.p2	U13393|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr11_+_7097781_7097869	0.529194	BPTF.p2	BC013345|Igfbp1|16006|insulin-like growth factor binding protein 1	NM_008341|Igfbp1|16006|insulin-like growth factor binding protein 1	X81579|Igfbp1|16006|insulin-like growth factor binding protein 1
mm9_v1_chrX_+_56164637_56164660	0.528897	BPTF.p2	BC087920|4930550L24Rik|75352|RIKEN cDNA 4930550L24 gene	NM_023774|4930550L24Rik|75352|RIKEN cDNA 4930550L24 gene	AK016090|4930550L24Rik|75352|RIKEN cDNA 4930550L24 gene
mm9_v1_chr6_+_123179860_123179891	0.52878	BPTF.p2	NM_001190320|Clec4n|56620|C-type lectin domain family 4, member n	NM_001190321|Clec4n|56620|C-type lectin domain family 4, member n	NM_020001|Clec4n|56620|C-type lectin domain family 4, member n	AK089166|Clec4n|56620|C-type lectin domain family 4, member n	AK131697|Clec4n|56620|C-type lectin domain family 4, member n	AK154673|Clec4n|56620|C-type lectin domain family 4, member n	AK171046|Clec4n|56620|C-type lectin domain family 4, member n	AF240357|Clec4n|56620|C-type lectin domain family 4, member n	AF240358|Clec4n|56620|C-type lectin domain family 4, member n	AF240359|Clec4n|56620|C-type lectin domain family 4, member n	BC023008|Clec4n|56620|C-type lectin domain family 4, member n
mm9_v1_chr1_-_58502223_58502338	0.528138	BPTF.p2	BC061645|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	AF315803|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	BC060993|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	AK010207|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	NM_027351|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3	NM_027374|Ppil3|70225|peptidylprolyl isomerase (cyclophilin)-like 3
mm9_v1_chr15_+_99803329_99803358	0.527673	BPTF.p2	AK139909|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr1_-_183111470_183111575	0.525298	BPTF.p2	AK211036|Wdr26|226757|WD repeat domain 26
mm9_v1_chr6_-_93628981_93629110	0.525168	BPTF.p2	AF027505|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK081387|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr11_+_85710266_85710349	0.524221	BPTF.p2	NM_172798|Tbx4|21387|T-box 4	AK139949|Tbx4|21387|T-box 4	AK028407|Tbx4|21387|T-box 4	AK147984|Tbx4|21387|T-box 4
mm9_v1_chr2_+_71291369_71291427	0.524166	BPTF.p2	AK010067|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	NM_025633|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	AK005241|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	BC060739|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)
mm9_v1_chr13_-_106084846_106084897	0.523979	BPTF.p2	AK013941|Rnf180|71816|ring finger protein 180
mm9_v1_chr5_+_138011078_138011117	0.523663	BPTF.p2	NM_015799|Trfr2|50765|transferrin receptor 2	AK004848|Trfr2|50765|transferrin receptor 2	AK004965|Trfr2|50765|transferrin receptor 2
mm9_v1_chr15_-_78893275_78893359	0.523412	BPTF.p2	BC014743|Ankrd54|223690|ankyrin repeat domain 54	NM_144849|Ankrd54|223690|ankyrin repeat domain 54	DQ884878|Ankrd54|223690|ankyrin repeat domain 54	AK133785|Ankrd54|223690|ankyrin repeat domain 54	AK050440|Ankrd54|223690|ankyrin repeat domain 54	AK143625|Ankrd54|223690|ankyrin repeat domain 54	AK084500|Ankrd54|223690|ankyrin repeat domain 54
mm9_v1_chr18_+_68497163_68497259	0.523226	BPTF.p2	NM_013596|Mc5r|17203|melanocortin 5 receptor	U08354|Mc5r|17203|melanocortin 5 receptor	BC100720|Mc5r|17203|melanocortin 5 receptor	BC100721|Mc5r|17203|melanocortin 5 receptor	BC100722|Mc5r|17203|melanocortin 5 receptor	BC100723|Mc5r|17203|melanocortin 5 receptor
mm9_v1_chr13_+_54676356_54676474	0.523185	BPTF.p2	NM_019968|Arl10|56795|ADP-ribosylation factor-like 10	AK154684|Arl10|56795|ADP-ribosylation factor-like 10	AF205936|Arl10|56795|ADP-ribosylation factor-like 10	BC115498|Arl10|56795|ADP-ribosylation factor-like 10
mm9_v1_chr5_+_97222355_97222536	0.522071	BPTF.p2	AK150922|Anxa3|11745|annexin A3	NM_013470|Anxa3|11745|annexin A3	BC090634|Anxa3|11745|annexin A3	AK152863|Anxa3|11745|annexin A3	AJ001633|Anxa3|11745|annexin A3	AK150951|Anxa3|11745|annexin A3	AK166389|Anxa3|11745|annexin A3	AK151771|Anxa3|11745|annexin A3	BC141167|Anxa3|11745|annexin A3	AK168507|Anxa3|11745|annexin A3	AK152837|Anxa3|11745|annexin A3	AK168396|Anxa3|11745|annexin A3	AK169423|Anxa3|11745|annexin A3	AK169113|Anxa3|11745|annexin A3
mm9_v1_chr11_+_49058980_49059003	0.521539	BPTF.p2	L07037|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr10_-_85961558_85961626	0.521487	BPTF.p2	AF192754|Syn3|27204|synapsin III	AK086955|Syn3|27204|synapsin III	AK080557|Syn3|27204|synapsin III	AK084032|Syn3|27204|synapsin III
mm9_v1_chr9_-_60358813_60358841	0.521042	BPTF.p2	AK085819|Thsd4|207596|thrombospondin, type I, domain containing 4	AK138976|Thsd4|207596|thrombospondin, type I, domain containing 4	NM_001040426|Thsd4|207596|thrombospondin, type I, domain containing 4
mm9_v1_chr6_-_87800966_87801099	0.520526	BPTF.p2	AK078427|Cnbp|12785|cellular nucleic acid binding protein	L12693|Cnbp|12785|cellular nucleic acid binding protein	X63866|Cnbp|12785|cellular nucleic acid binding protein	Z11870|Cnbp|12785|cellular nucleic acid binding protein	Z11871|Cnbp|12785|cellular nucleic acid binding protein	BC058723|Cnbp|12785|cellular nucleic acid binding protein	U20326|Cnbp|12785|cellular nucleic acid binding protein	AK151528|Cnbp|12785|cellular nucleic acid binding protein	AK146593|Cnbp|12785|cellular nucleic acid binding protein	AK159810|Cnbp|12785|cellular nucleic acid binding protein	AK153414|Cnbp|12785|cellular nucleic acid binding protein	AK147157|Cnbp|12785|cellular nucleic acid binding protein	AK146367|Cnbp|12785|cellular nucleic acid binding protein	AK145444|Cnbp|12785|cellular nucleic acid binding protein	AK146224|Cnbp|12785|cellular nucleic acid binding protein	AK151961|Cnbp|12785|cellular nucleic acid binding protein	AK146301|Cnbp|12785|cellular nucleic acid binding protein	AK146344|Cnbp|12785|cellular nucleic acid binding protein	AK151317|Cnbp|12785|cellular nucleic acid binding protein	AK144740|Cnbp|12785|cellular nucleic acid binding protein	AK075760|Cnbp|12785|cellular nucleic acid binding protein	NM_001109745|Cnbp|12785|cellular nucleic acid binding protein	NM_001109746|Cnbp|12785|cellular nucleic acid binding protein	NM_013493|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chrX_+_45610055_45610110	0.519905	BPTF.p2	AK134348|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	BC062165|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK165575|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK165628|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK012492|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	BC082590|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK134784|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AY316163|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	AK172924|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	NM_028276|Utp14a|72554|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
mm9_v1_chr2_+_155890933_155891049	0.519359	BPTF.p2	AK220494|Spag4|245865|sperm associated antigen 4	NM_139151|Spag4|245865|sperm associated antigen 4	AK043812|Spag4|245865|sperm associated antigen 4	AK028080|Spag4|245865|sperm associated antigen 4	BC107321|Spag4|245865|sperm associated antigen 4
mm9_v1_chr13_+_63066185_63066252	0.516942	BPTF.p2	AK044477|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene
mm9_v1_chr1_+_40572206_40572292	0.516856	BPTF.p2	AF077347|Il18rap|16174|interleukin 18 receptor accessory protein	BC120598|Il18rap|16174|interleukin 18 receptor accessory protein	BC120600|Il18rap|16174|interleukin 18 receptor accessory protein	NM_010553|Il18rap|16174|interleukin 18 receptor accessory protein	AK137541|Il18rap|16174|interleukin 18 receptor accessory protein	AK053176|Il18rap|16174|interleukin 18 receptor accessory protein
mm9_v1_chr5_-_121010389_121010403	0.515993	BPTF.p2	AK137626|Tpcn1|252972|two pore channel 1
mm9_v1_chr9_+_98390955_98390986	0.51563	BPTF.p2	NM_009034|Rbp2|19660|retinol binding protein 2, cellular	AK003312|Rbp2|19660|retinol binding protein 2, cellular	X74154|Rbp2|19660|retinol binding protein 2, cellular	BC125551|Rbp2|19660|retinol binding protein 2, cellular	BC125553|Rbp2|19660|retinol binding protein 2, cellular
mm9_v1_chr7_-_39056336_39056416	0.51557	BPTF.p2	AK002855|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK003293|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	NM_025390|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK152948|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK150459|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK003908|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	BC011465|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)	AK054466|Pop4|66161|processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
mm9_v1_chr6_+_29644178_29644255	0.515361	BPTF.p2	AF276890|Tspan33|232670|tetraspanin 33	AK172176|Tspan33|232670|tetraspanin 33	AK004954|Tspan33|232670|tetraspanin 33	BC024685|Tspan33|232670|tetraspanin 33	NM_146173|Tspan33|232670|tetraspanin 33
mm9_v1_chr2_+_132516018_132516018	0.514279	BPTF.p2	BC100475|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	NM_028637|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chr18_-_39572137_39572180	0.513296	BPTF.p2	AK171439|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	AK163857|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr8_+_109034784_109034845	0.51297	BPTF.p2	AK045041|Cdh3|12560|cadherin 3	AK164577|Cdh3|12560|cadherin 3	NM_007665|Cdh3|12560|cadherin 3	AK031265|Cdh3|12560|cadherin 3	NM_001037809|Cdh3|12560|cadherin 3	X06340|Cdh3|12560|cadherin 3	BC098459|Cdh3|12560|cadherin 3
mm9_v1_chr7_-_16425027_16425027	0.512208	BPTF.p2	NM_145710|Obox6|252830|oocyte specific homeobox 6
mm9_v1_chr7_-_111795818_111795818	0.512173	BPTF.p2	AK033992|Olfr658|259051|olfactory receptor 658	NM_147049|Olfr658|259051|olfactory receptor 658
mm9_v1_chr19_+_12752655_12752655	0.511781	BPTF.p2	BC065104|Olfr1443|258693|olfactory receptor 1443	NM_146698|Olfr1443|258693|olfactory receptor 1443
mm9_v1_chr9_+_123836859_123837183	0.51168	BPTF.p2	NM_009878|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK132906|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK144737|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U19597|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	BC013898|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	U20497|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	AK140808|Cdkn2d|12581|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
mm9_v1_chr11_+_98798970_98799011	0.511653	BPTF.p2	X56572|Rara|19401|retinoic acid receptor, alpha	NM_009024|Rara|19401|retinoic acid receptor, alpha	BC010216|Rara|19401|retinoic acid receptor, alpha
mm9_v1_chr2_-_121944071_121944127	0.511612	BPTF.p2	AK039286|Spg11|214585|spastic paraplegia 11	AK049236|Spg11|214585|spastic paraplegia 11	AK147500|Spg11|214585|spastic paraplegia 11	NM_145531|Spg11|214585|spastic paraplegia 11
mm9_v1_chr4_-_144681825_144681852	0.511455	BPTF.p2	BC037490|Vps13d|230895|vacuolar protein sorting 13 D (yeast)
mm9_v1_chr13_+_49678115_49678143	0.511331	BPTF.p2	AB007848|Omd|27047|osteomodulin	NM_012050|Omd|27047|osteomodulin	BC095997|Omd|27047|osteomodulin
mm9_v1_chr1_-_135506798_135506877	0.511106	BPTF.p2	BC055765|Snrpe|20643|small nuclear ribonucleoprotein E	BC051207|Snrpe|20643|small nuclear ribonucleoprotein E	BC008262|Snrpe|20643|small nuclear ribonucleoprotein E	AK019462|Snrpe|20643|small nuclear ribonucleoprotein E	NM_009227|Snrpe|20643|small nuclear ribonucleoprotein E
mm9_v1_chr13_+_49748707_49748855	0.510753	BPTF.p2	AK147172|Nol8|70930|nucleolar protein 8	NM_001081350|Nol8|70930|nucleolar protein 8	BC125575|Nol8|70930|nucleolar protein 8	BC125579|Nol8|70930|nucleolar protein 8	AK029961|Nol8|70930|nucleolar protein 8	BC049166|Nol8|70930|nucleolar protein 8
mm9_v1_chr12_+_21322219_21322285	0.510728	BPTF.p2	BC060949|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK005287|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	NM_026347|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK011299|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK014743|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	BC087901|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
mm9_v1_chr6_-_146583036_146583144	0.510365	BPTF.p2	BC023389|Tm7sf3|67623|transmembrane 7 superfamily member 3	DQ104329|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK171111|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK154633|Tm7sf3|67623|transmembrane 7 superfamily member 3	NM_026281|Tm7sf3|67623|transmembrane 7 superfamily member 3
mm9_v1_chr14_-_53115369_53115369	0.510239	BPTF.p2	NM_001170918|Olfr1507|57269|olfactory receptor 1507
mm9_v1_chr3_+_88390817_88390831	0.510003	BPTF.p2	AK217251|Ssr2|66256|signal sequence receptor, beta
mm9_v1_chr9_-_118059257_118059259	0.509842	BPTF.p2	AK168728|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr2_-_75819804_75820023	0.509407	BPTF.p2	BC004773|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK045096|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK029535|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK019670|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	NM_030188|Ttc30a1|78802|tetratricopeptide repeat domain 30A1
mm9_v1_chr2_-_155555105_155555210	0.509366	BPTF.p2	AK075650|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	BC008268|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK149892|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK040560|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK079296|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK166998|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK080636|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK029164|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK155024|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	NM_145537|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2
mm9_v1_chr6_-_83075022_83075189	0.509283	BPTF.p2	NM_023547|Ino80b|70020|INO80 complex subunit B	BC019383|Ino80b|70020|INO80 complex subunit B	BC047990|Ino80b|70020|INO80 complex subunit B	BC058788|Ino80b|70020|INO80 complex subunit B	AK010946|Ino80b|70020|INO80 complex subunit B
mm9_v1_chr1_-_165242552_165242739	0.508416	BPTF.p2	AK165914|Prrx1|18933|paired related homeobox 1	AK019503|Prrx1|18933|paired related homeobox 1
mm9_v1_chr2_+_22629846_22630018	0.50667	BPTF.p2	AK041552|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	NM_019456|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	AK037119|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	AK042467|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	AK040084|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	AK036755|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	BC023110|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	AK162323|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	AK021331|Apbb1ip|54519|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
mm9_v1_chr17_+_15636851_15636923	0.505533	BPTF.p2	AK085037|Tbp|21374|TATA box binding protein	NM_013684|Tbp|21374|TATA box binding protein	BC016476|Tbp|21374|TATA box binding protein	AK089397|Tbp|21374|TATA box binding protein	BC050136|Tbp|21374|TATA box binding protein	U63933|Tbp|21374|TATA box binding protein	BC012685|Tbp|21374|TATA box binding protein
mm9_v1_chr1_+_184054867_184055092	0.505356	BPTF.p2	NM_012058|Srp9|27058|signal recognition particle 9	BC039648|Srp9|27058|signal recognition particle 9	AK003606|Srp9|27058|signal recognition particle 9	AK020583|Srp9|27058|signal recognition particle 9	AK146882|Srp9|27058|signal recognition particle 9	AK051208|Srp9|27058|signal recognition particle 9	AK169314|Srp9|27058|signal recognition particle 9	AK020620|Srp9|27058|signal recognition particle 9	AK011720|Srp9|27058|signal recognition particle 9	BC090254|Srp9|27058|signal recognition particle 9	X78304|Srp9|27058|signal recognition particle 9
mm9_v1_chr11_+_115626816_115626845	0.504153	BPTF.p2	BC053088|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr13_+_41096408_41096460	0.503926	BPTF.p2	BC043461|Pak1ip1|68083|PAK1 interacting protein 1	BC043725|Pak1ip1|68083|PAK1 interacting protein 1
mm9_v1_chr14_+_31528034_31528081	0.503474	BPTF.p2	NM_019460|Sfmbt1|54650|Scm-like with four mbt domains 1	BC066188|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr1_+_122499031_122499257	0.503241	BPTF.p2	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chr7_+_140050907_140050982	0.502158	BPTF.p2	NM_198017|Fam175b|109359|family with sequence similarity 175, member B	AK082887|Fam175b|109359|family with sequence similarity 175, member B	AK163537|Fam175b|109359|family with sequence similarity 175, member B	AK165918|Fam175b|109359|family with sequence similarity 175, member B	AK170704|Fam175b|109359|family with sequence similarity 175, member B	AK146064|Fam175b|109359|family with sequence similarity 175, member B	AK171524|Fam175b|109359|family with sequence similarity 175, member B
mm9_v1_chr9_-_60497537_60497561	0.502078	BPTF.p2	AK082406|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr5_-_111209468_111209636	0.501348	BPTF.p2	BC021446|Pus1|56361|pseudouridine synthase 1	BC034359|Pus1|56361|pseudouridine synthase 1	AB041563|Pus1|56361|pseudouridine synthase 1	AK089258|Pus1|56361|pseudouridine synthase 1	NM_001025561|Pus1|56361|pseudouridine synthase 1	NM_019700|Pus1|56361|pseudouridine synthase 1	NM_001025562|Pus1|56361|pseudouridine synthase 1	AK161521|Pus1|56361|pseudouridine synthase 1
mm9_v1_chr11_-_53520811_53520848	0.501213	BPTF.p2	BC002033|Rad50|19360|RAD50 homolog (S. cerevisiae)	AK018001|Rad50|19360|RAD50 homolog (S. cerevisiae)	AK037641|Rad50|19360|RAD50 homolog (S. cerevisiae)	NM_009012|Rad50|19360|RAD50 homolog (S. cerevisiae)
mm9_v1_chr8_+_96738490_96738507	0.501082	BPTF.p2	AK010450|Nup93|71805|nucleoporin 93	AK167105|Nup93|71805|nucleoporin 93	AK028864|Nup93|71805|nucleoporin 93	NM_172410|Nup93|71805|nucleoporin 93	BC023140|Nup93|71805|nucleoporin 93
mm9_v1_chr14_-_56681093_56681151	0.500433	BPTF.p2	AB051900|Mcpt4|17227|mast cell protease 4	X68804|Mcpt4|17227|mast cell protease 4	BC026198|Mcpt4|17227|mast cell protease 4	AK144385|Mcpt4|17227|mast cell protease 4	AY007569|Mcpt4|17227|mast cell protease 4	M55617|Mcpt4|17227|mast cell protease 4	NM_010779|Mcpt4|17227|mast cell protease 4
mm9_v1_chr14_-_51544497_51544585	0.499957	BPTF.p2	BC002296|Osgep|66246|O-sialoglycoprotein endopeptidase	AK167893|Osgep|66246|O-sialoglycoprotein endopeptidase	AK049955|Osgep|66246|O-sialoglycoprotein endopeptidase	AK005291|Osgep|66246|O-sialoglycoprotein endopeptidase	AK049480|Osgep|66246|O-sialoglycoprotein endopeptidase	AK157554|Osgep|66246|O-sialoglycoprotein endopeptidase	AK166415|Osgep|66246|O-sialoglycoprotein endopeptidase	AK076246|Osgep|66246|O-sialoglycoprotein endopeptidase	AK088346|Osgep|66246|O-sialoglycoprotein endopeptidase	AK142730|Osgep|66246|O-sialoglycoprotein endopeptidase	NM_133676|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr1_+_79772668_79772831	0.498773	BPTF.p2	AK156814|Mrpl44|69163|mitochondrial ribosomal protein L44	AK019986|Mrpl44|69163|mitochondrial ribosomal protein L44	AK146024|Mrpl44|69163|mitochondrial ribosomal protein L44	AK150537|Mrpl44|69163|mitochondrial ribosomal protein L44	AK151854|Mrpl44|69163|mitochondrial ribosomal protein L44
mm9_v1_chr4_-_143490282_143490282	0.498209	BPTF.p2	NM_001085414|Pramef6|195555|PRAME family member 6
mm9_v1_chr2_-_173411352_173411489	0.497867	BPTF.p2	AK080176|Ppp4r1l-ps|100043911|protein phosphatase 4, regulatory subunit 1-like, pseudogene	AK046376|Ppp4r1l-ps|100043911|protein phosphatase 4, regulatory subunit 1-like, pseudogene
mm9_v1_chr11_-_118216689_118216724	0.497592	BPTF.p2	NM_011594|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr12_+_111805938_111806039	0.496977	BPTF.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr5_+_150480804_150480876	0.4969	BPTF.p2	NM_001081204|B3galtl|381694|beta 1,3-galactosyltransferase-like	AK089440|B3galtl|381694|beta 1,3-galactosyltransferase-like	AK145082|B3galtl|381694|beta 1,3-galactosyltransferase-like	AB253762|B3galtl|381694|beta 1,3-galactosyltransferase-like
mm9_v1_chr12_-_57714253_57714270	0.494535	BPTF.p2	BC150762|Nkx2-9|18094|NK2 transcription factor related, locus 9 (Drosophila)	Y15741|Nkx2-9|18094|NK2 transcription factor related, locus 9 (Drosophila)	NM_008701|Nkx2-9|18094|NK2 transcription factor related, locus 9 (Drosophila)
mm9_v1_chr2_-_172284055_172284095	0.49297	BPTF.p2	BC139073|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	BC139076|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	AK039414|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	NM_001039560|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7
mm9_v1_chr17_-_56256668_56256720	0.492832	BPTF.p2	AY919875|Plin5|66968|perilipin 5	NM_001077348|Plin5|66968|perilipin 5
mm9_v1_chr2_-_109118405_109118446	0.492354	BPTF.p2	BC115926|Mett5d1|76894|methyltransferase 5 domain containing 1	BC117549|Mett5d1|76894|methyltransferase 5 domain containing 1	BC106186|Mett5d1|76894|methyltransferase 5 domain containing 1	BC089533|Mett5d1|76894|methyltransferase 5 domain containing 1	AK002682|Mett5d1|76894|methyltransferase 5 domain containing 1	NM_029790|Mett5d1|76894|methyltransferase 5 domain containing 1
mm9_v1_chr14_-_66452720_66452805	0.492093	BPTF.p2	BC033303|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	BC071275|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK166457|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK050845|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK144685|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	NM_028039|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)
mm9_v1_chr4_+_130225132_130225155	0.492058	BPTF.p2	AK154059|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr15_+_100592177_100592343	0.492044	BPTF.p2	AK034237|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	NM_021530|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK083945|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK050563|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK039404|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	BC030388|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AF224508|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8	AK173014|Slc4a8|59033|solute carrier family 4 (anion exchanger), member 8
mm9_v1_chr3_+_19408594_19408651	0.491572	BPTF.p2	NM_001163536|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	NM_025489|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AK005725|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AK005749|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC049579|Dnajc5b|66326|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
mm9_v1_chr6_-_56975266_56975266	0.490477	BPTF.p2	NM_001166710|Vmn1r7|434016|vomeronasal 1 receptor 7
mm9_v1_chr17_+_26813327_26813409	0.490455	BPTF.p2	AK017760|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	NM_025272|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK159669|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK134836|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK007610|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK008464|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK168015|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	BC024733|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK013229|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK030335|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E
mm9_v1_chr14_-_51544484_51544489	0.48977	BPTF.p2	BC091757|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr9_-_44550590_44550598	0.489663	BPTF.p2	
mm9_v1_chr17_-_27165478_27165573	0.489606	BPTF.p2	AK089220|Bak1|12018|BCL2-antagonist/killer 1	BC057589|Bak1|12018|BCL2-antagonist/killer 1	NM_007523|Bak1|12018|BCL2-antagonist/killer 1	Y13231|Bak1|12018|BCL2-antagonist/killer 1
mm9_v1_chr5_+_104599721_104599730	0.489326	BPTF.p2	U67916|Dspp|666279|dentin sialophosphoprotein	BC116172|Dspp|666279|dentin sialophosphoprotein	BC116173|Dspp|666279|dentin sialophosphoprotein	BC129802|Dspp|666279|dentin sialophosphoprotein	NM_010080|Dspp|666279|dentin sialophosphoprotein
mm9_v1_chr7_-_97052120_97052138	0.489036	BPTF.p2	AK014876|Ccdc81|70884|coiled-coil domain containing 81	BC127049|Ccdc81|70884|coiled-coil domain containing 81	BC152307|Ccdc81|70884|coiled-coil domain containing 81	BC152308|Ccdc81|70884|coiled-coil domain containing 81	AK029544|Ccdc81|70884|coiled-coil domain containing 81	NM_001162979|Ccdc81|70884|coiled-coil domain containing 81
mm9_v1_chr11_-_69480763_69480942	0.488905	BPTF.p2	
mm9_v1_chr9_+_15110657_15110715	0.488892	BPTF.p2	NM_027261|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	NM_029248|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK016109|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK050165|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK158208|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK161656|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK166329|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK166633|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK012662|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	AK014920|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D	BC110660|Taf1d|75316|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
mm9_v1_chr1_+_133904162_133904241	0.488854	BPTF.p2	NM_007923|Elk4|13714|ELK4, member of ETS oncogene family	AK156537|Elk4|13714|ELK4, member of ETS oncogene family
mm9_v1_chr8_-_63433528_63433596	0.488604	BPTF.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr14_+_27399015_27399092	0.488191	BPTF.p2	AK054295|Fam116a|211922|family with sequence similarity 116, member A	NM_001134465|Fam116a|211922|family with sequence similarity 116, member A	NM_145969|Fam116a|211922|family with sequence similarity 116, member A	AK132219|Fam116a|211922|family with sequence similarity 116, member A	AK131163|Fam116a|211922|family with sequence similarity 116, member A	BC025603|Fam116a|211922|family with sequence similarity 116, member A	AK161908|Fam116a|211922|family with sequence similarity 116, member A	AK054197|Fam116a|211922|family with sequence similarity 116, member A
mm9_v1_chr8_-_24348082_24348154	0.487648	BPTF.p2	BC002156|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)	AK076104|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)	NM_024240|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)
mm9_v1_chr15_-_81688686_81688755	0.48757	BPTF.p2	BC094031|Tob2|57259|transducer of ERBB2, 2	BC021869|Tob2|57259|transducer of ERBB2, 2	AK049766|Tob2|57259|transducer of ERBB2, 2	AK080817|Tob2|57259|transducer of ERBB2, 2	AK143542|Tob2|57259|transducer of ERBB2, 2	AK037631|Tob2|57259|transducer of ERBB2, 2	AK044623|Tob2|57259|transducer of ERBB2, 2	NM_020507|Tob2|57259|transducer of ERBB2, 2
mm9_v1_chr8_-_11635748_11635782	0.487312	BPTF.p2	AK031808|Ankrd10|102334|ankyrin repeat domain 10	AK033623|Ankrd10|102334|ankyrin repeat domain 10	AK038156|Ankrd10|102334|ankyrin repeat domain 10	AK042500|Ankrd10|102334|ankyrin repeat domain 10	AK081754|Ankrd10|102334|ankyrin repeat domain 10	AK082875|Ankrd10|102334|ankyrin repeat domain 10	AK084456|Ankrd10|102334|ankyrin repeat domain 10	AK143253|Ankrd10|102334|ankyrin repeat domain 10	NM_001167967|Ankrd10|102334|ankyrin repeat domain 10	NM_133971|Ankrd10|102334|ankyrin repeat domain 10	AK050983|Ankrd10|102334|ankyrin repeat domain 10
mm9_v1_chr11_-_69509298_69509323	0.486888	BPTF.p2	BC096441|BC096441|619441|cDNA sequence BC096441
mm9_v1_chr5_+_138011057_138011067	0.486835	BPTF.p2	AK155526|Trfr2|50765|transferrin receptor 2
mm9_v1_chr2_-_91019477_91019477	0.486364	BPTF.p2	NM_001177720|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr7_-_16807341_16807387	0.486286	BPTF.p2	BC080856|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK129062|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK004733|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	NM_027883|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm9_v1_chr7_-_20506379_20506493	0.485755	BPTF.p2	AJ563420|Pvr|52118|poliovirus receptor	BC138219|Pvr|52118|poliovirus receptor	BC138220|Pvr|52118|poliovirus receptor	BC032283|Pvr|52118|poliovirus receptor	AB195430|Pvr|52118|poliovirus receptor	BC013673|Pvr|52118|poliovirus receptor	AK078344|Pvr|52118|poliovirus receptor	AK014446|Pvr|52118|poliovirus receptor	AK038747|Pvr|52118|poliovirus receptor	AK080753|Pvr|52118|poliovirus receptor	AK165873|Pvr|52118|poliovirus receptor	NM_027514|Pvr|52118|poliovirus receptor
mm9_v1_chr14_+_56194658_56194712	0.485612	BPTF.p2	BC048823|Fitm1|68680|fat storage-inducing transmembrane protein 1
mm9_v1_chr3_-_87734023_87734090	0.485234	BPTF.p2	AK082223|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1	BC012224|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1	AK165264|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1	AK030684|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1	AK035389|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1	AK148128|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1
mm9_v1_chr1_+_6720153_6720223	0.485124	BPTF.p2	AK133743|St18|240690|suppression of tumorigenicity 18	BC118528|St18|240690|suppression of tumorigenicity 18	AK137440|St18|240690|suppression of tumorigenicity 18	AK141513|St18|240690|suppression of tumorigenicity 18
mm9_v1_chr10_-_60895433_60895442	0.485025	BPTF.p2	AK216330|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr11_-_50244605_50244617	0.483457	BPTF.p2	AK046633|Rufy1|216724|RUN and FYVE domain containing 1	NM_172557|Rufy1|216724|RUN and FYVE domain containing 1	AK051178|Rufy1|216724|RUN and FYVE domain containing 1
mm9_v1_chr16_-_98183757_98183799	0.482497	BPTF.p2	BC051176|Zfp295|114565|zinc finger protein 295	AK129313|Zfp295|114565|zinc finger protein 295	AK031118|Zfp295|114565|zinc finger protein 295	AK080932|Zfp295|114565|zinc finger protein 295	AK145072|Zfp295|114565|zinc finger protein 295	AK034057|Zfp295|114565|zinc finger protein 295	NM_001081684|Zfp295|114565|zinc finger protein 295	NM_001081685|Zfp295|114565|zinc finger protein 295	NM_175428|Zfp295|114565|zinc finger protein 295	AK170928|Zfp295|114565|zinc finger protein 295
mm9_v1_chr13_-_33935276_33935276	0.482399	BPTF.p2	NM_001045535|Serpinb6e|435350|serine (or cysteine) peptidase inhibitor, clade B, member 6e
mm9_v1_chrX_+_45976982_45977308	0.482342	BPTF.p2	NM_001166450|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	BC048692|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155812|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155813|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr12_+_114782118_114782165	0.481038	BPTF.p2	AY158689|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	NM_174885|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC139059|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC108387|Adam6a|238406|a disintegrin and metallopeptidase domain 6A
mm9_v1_chr7_+_29237141_29237256	0.480808	BPTF.p2	AK090175|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1	AK144493|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1	NM_001141921|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1
mm9_v1_chr7_-_35841565_35841620	0.480479	BPTF.p2	NM_009884|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	S80556|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr9_-_71743854_71743929	0.479631	BPTF.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chr3_+_90404135_90404166	0.479497	BPTF.p2	AK133717|S100a3|20197|S100 calcium binding protein A3	AF004941|S100a3|20197|S100 calcium binding protein A3	NM_011310|S100a3|20197|S100 calcium binding protein A3	BC099893|S100a3|20197|S100 calcium binding protein A3	BC100690|S100a3|20197|S100 calcium binding protein A3	BC100696|S100a3|20197|S100 calcium binding protein A3	BC100697|S100a3|20197|S100 calcium binding protein A3	AK161105|S100a3|20197|S100 calcium binding protein A3
mm9_v1_chr2_-_35973217_35973333	0.47846	BPTF.p2	
mm9_v1_chr3_+_102799635_102799652	0.478232	BPTF.p2	AK035590|Sike1|66641|suppressor of IKBKE 1
mm9_v1_chr4_+_56756283_56756326	0.477351	BPTF.p2	AB023063|Actl7a|11470|actin-like 7a	NM_009611|Actl7a|11470|actin-like 7a	AK006631|Actl7a|11470|actin-like 7a	BC049610|Actl7a|11470|actin-like 7a	AF113519|Actl7a|11470|actin-like 7a
mm9_v1_chr10_+_3134299_3134312	0.476939	BPTF.p2	AK033015|Cnksr3|215748|Cnksr family member 3	NM_172546|Cnksr3|215748|Cnksr family member 3
mm9_v1_chr6_+_34334201_34334334	0.476533	BPTF.p2	AK075865|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	NM_172398|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	BC026843|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK087002|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK082777|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK019906|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK169490|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)
mm9_v1_chr17_-_51965912_51965912	0.474787	BPTF.p2	NM_001163631|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr10_+_60638009_60638092	0.473603	BPTF.p2	AF257502|Tbata|65971|thymus, brain and testes associated	AF257503|Tbata|65971|thymus, brain and testes associated	AY243457|Tbata|65971|thymus, brain and testes associated	NM_001017407|Tbata|65971|thymus, brain and testes associated	NM_001017409|Tbata|65971|thymus, brain and testes associated	NM_023064|Tbata|65971|thymus, brain and testes associated	EU622858|Tbata|65971|thymus, brain and testes associated
mm9_v1_chr7_+_97535490_97535508	0.472899	BPTF.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr8_-_49075884_49075954	0.472406	BPTF.p2	AK147648|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	BC067050|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	NM_133791|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	AB045323|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr5_+_108797254_108797392	0.472166	BPTF.p2	AK165889|Gm10419|100038441|predicted gene 10419
mm9_v1_chr4_-_83132289_83132381	0.472016	BPTF.p2	BC043079|Psip1|101739|PC4 and SFRS1 interacting protein 1	NM_133948|Psip1|101739|PC4 and SFRS1 interacting protein 1	BC002104|Psip1|101739|PC4 and SFRS1 interacting protein 1	AK161426|Psip1|101739|PC4 and SFRS1 interacting protein 1	AK011572|Psip1|101739|PC4 and SFRS1 interacting protein 1	BC052177|Psip1|101739|PC4 and SFRS1 interacting protein 1
mm9_v1_chr19_+_40734282_40734322	0.471914	BPTF.p2	AK030601|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	NM_009848|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	BC011278|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	AF037366|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1
mm9_v1_chr7_-_115210309_115210309	0.470766	BPTF.p2	NM_020291|Olfr480|56861|olfactory receptor 480
mm9_v1_chr7_+_106614513_106614536	0.470257	BPTF.p2	NM_028145|Klhl35|72184|kelch-like 35 (Drosophila)	AK013012|Klhl35|72184|kelch-like 35 (Drosophila)
mm9_v1_chr16_-_22121346_22121350	0.470198	BPTF.p2	AK170531|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr1_+_132916420_132916446	0.469813	BPTF.p2	AK152344|Il10|16153|interleukin 10	NM_010548|Il10|16153|interleukin 10	M37897|Il10|16153|interleukin 10	BC120612|Il10|16153|interleukin 10	BC137844|Il10|16153|interleukin 10
mm9_v1_chr2_+_101726413_101726444	0.469584	BPTF.p2	AK154731|Commd9|76501|COMM domain containing 9	AK007640|Commd9|76501|COMM domain containing 9	NM_029635|Commd9|76501|COMM domain containing 9	BC060058|Commd9|76501|COMM domain containing 9	BC030374|Commd9|76501|COMM domain containing 9	BC040688|Commd9|76501|COMM domain containing 9	BC043684|Commd9|76501|COMM domain containing 9
mm9_v1_chr10_-_80380806_80381016	0.469364	BPTF.p2	AK180471|Lmnb2|16907|lamin B2	X54098|Lmnb2|16907|lamin B2	BC051985|Lmnb2|16907|lamin B2	BC042430|Lmnb2|16907|lamin B2	NM_010722|Lmnb2|16907|lamin B2
mm9_v1_chr8_-_4105727_4105834	0.469091	BPTF.p2	BC038121|Cd209f|69142|CD209f antigen	BC052782|Cd209f|69142|CD209f antigen	BC099497|Cd209f|69142|CD209f antigen	AK007638|Cd209f|69142|CD209f antigen	NM_026956|Cd209f|69142|CD209f antigen	BC021323|Cd209f|69142|CD209f antigen
mm9_v1_chr2_+_154132962_154132979	0.468365	BPTF.p2	AK017304|5430413K10Rik|433492|RIKEN cDNA 5430413K10 gene	BC083121|5430413K10Rik|433492|RIKEN cDNA 5430413K10 gene	NM_001025574|5430413K10Rik|433492|RIKEN cDNA 5430413K10 gene
mm9_v1_chr12_+_106429252_106429254	0.467805	BPTF.p2	AF195490|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3	BC119260|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3	BC120575|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3	NM_013772|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3
mm9_v1_chr9_-_106349966_106349991	0.467684	BPTF.p2	BC006879|Abhd14a|68644|abhydrolase domain containing 14A
mm9_v1_chr18_+_60535680_60535700	0.466345	BPTF.p2	AK172047|Iigp1|60440|interferon inducible GTPase 1	AK013785|Iigp1|60440|interferon inducible GTPase 1	AK153060|Iigp1|60440|interferon inducible GTPase 1	AK156611|Iigp1|60440|interferon inducible GTPase 1	NM_001146275|Iigp1|60440|interferon inducible GTPase 1	NM_021792|Iigp1|60440|interferon inducible GTPase 1	AJ007971|Iigp1|60440|interferon inducible GTPase 1
mm9_v1_chr11_-_70165506_70165535	0.466182	BPTF.p2	CT010263|Alox15|11687|arachidonate 15-lipoxygenase	U04331|Alox15|11687|arachidonate 15-lipoxygenase	L34570|Alox15|11687|arachidonate 15-lipoxygenase	BC056625|Alox15|11687|arachidonate 15-lipoxygenase	BC081546|Alox15|11687|arachidonate 15-lipoxygenase	AK142371|Alox15|11687|arachidonate 15-lipoxygenase	NM_009660|Alox15|11687|arachidonate 15-lipoxygenase
mm9_v1_chr19_-_11023755_11023763	0.466086	BPTF.p2	AK078407|Ccdc86|108673|coiled-coil domain containing 86	AK078455|Ccdc86|108673|coiled-coil domain containing 86	NM_023731|Ccdc86|108673|coiled-coil domain containing 86
mm9_v1_chr14_-_21475760_21475766	0.46597	BPTF.p2	NM_021508|Myoz1|59011|myozenin 1
mm9_v1_chr17_-_24210402_24210430	0.465931	BPTF.p2	BC021777|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK129077|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK143644|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chrX_-_133654864_133654864	0.465865	BPTF.p2	AF085715|Esx1|13984|extraembryonic, spermatogenesis, homeobox 1	NM_007957|Esx1|13984|extraembryonic, spermatogenesis, homeobox 1
mm9_v1_chr19_+_22767272_22767282	0.465861	BPTF.p2	AK053673|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK046908|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK077331|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK082141|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK142504|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK161909|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK163890|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr9_-_37476762_37476806	0.46581	BPTF.p2	AK036933|Panx3|208098|pannexin 3	BC052822|Panx3|208098|pannexin 3	AK028288|Panx3|208098|pannexin 3	AK014690|Panx3|208098|pannexin 3	NM_172454|Panx3|208098|pannexin 3
mm9_v1_chr1_+_65357830_65357830	0.464977	BPTF.p2	AK045576|Pth2r|213527|parathyroid hormone 2 receptor	NM_139270|Pth2r|213527|parathyroid hormone 2 receptor
mm9_v1_chr16_-_38445988_38446143	0.464867	BPTF.p2	AK003751|Adprh|11544|ADP-ribosylarginine hydrolase
mm9_v1_chr10_+_119664096_119664177	0.464649	BPTF.p2	AK004503|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	NM_025431|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	BC024098|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	BC096681|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	BC106103|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	AK007375|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)	AK158700|Llph|66225|LLP homolog, long-term synaptic facilitation (Aplysia)
mm9_v1_chr2_+_144096696_144096740	0.464247	BPTF.p2	AK043140|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	AK018387|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	AK167919|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr17_+_73267643_73267665	0.463649	BPTF.p2	AK020110|Lbh|77889|limb-bud and heart	NM_029999|Lbh|77889|limb-bud and heart	AF317517|Lbh|77889|limb-bud and heart	BC026827|Lbh|77889|limb-bud and heart	BC052470|Lbh|77889|limb-bud and heart
mm9_v1_chr18_+_40418014_40418040	0.46339	BPTF.p2	NM_026135|Kctd16|383348|potassium channel tetramerisation domain containing 16	AK220381|Kctd16|383348|potassium channel tetramerisation domain containing 16
mm9_v1_chr9_-_100446444_100446539	0.463256	BPTF.p2	BC002015|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	NM_010878|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK051854|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr10_-_80131318_80131466	0.463035	BPTF.p2	AK164278|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK207448|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK008277|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr7_+_6173879_6173879	0.462593	BPTF.p2	AK139659|Zscan5b|170734|zinc finger and SCAN domain containing 5B	NM_133204|Zscan5b|170734|zinc finger and SCAN domain containing 5B
mm9_v1_chr14_+_17081782_17081874	0.462109	BPTF.p2	AK028248|Ngly1|59007|N-glycanase 1	AK148931|Ngly1|59007|N-glycanase 1	NM_021504|Ngly1|59007|N-glycanase 1	AK169205|Ngly1|59007|N-glycanase 1	AF250927|Ngly1|59007|N-glycanase 1	BC028961|Ngly1|59007|N-glycanase 1
mm9_v1_chr6_-_118369383_118369491	0.461608	BPTF.p2	AK133013|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK129082|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK135031|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK028266|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	BC057054|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	NM_194339|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK134315|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK162178|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr15_-_93166789_93166977	0.461318	BPTF.p2	AK184096|Yaf2|67057|YY1 associated factor 2	AK012787|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr8_+_34887177_34887229	0.460373	BPTF.p2	AK178391|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr11_+_75345164_75345232	0.460236	BPTF.p2	AB120363|Slc43a2|215113|solute carrier family 43, member 2	BC042513|Slc43a2|215113|solute carrier family 43, member 2	NM_173388|Slc43a2|215113|solute carrier family 43, member 2
mm9_v1_chr15_+_102348622_102348920	0.46021	BPTF.p2	AK143188|Tarbp2|21357|TAR (HIV) RNA binding protein 2	NM_009319|Tarbp2|21357|TAR (HIV) RNA binding protein 2	AK144205|Tarbp2|21357|TAR (HIV) RNA binding protein 2	BC053432|Tarbp2|21357|TAR (HIV) RNA binding protein 2	U79962|Tarbp2|21357|TAR (HIV) RNA binding protein 2	BC002028|Tarbp2|21357|TAR (HIV) RNA binding protein 2
mm9_v1_chrX_-_136533089_136533133	0.46011	BPTF.p2	BC037024|Rbm41|237073|RNA binding motif protein 41	AK077972|Rbm41|237073|RNA binding motif protein 41	NM_001172147|Rbm41|237073|RNA binding motif protein 41	NM_001172148|Rbm41|237073|RNA binding motif protein 41	NM_153586|Rbm41|237073|RNA binding motif protein 41
mm9_v1_chr13_-_89881804_89881848	0.46	BPTF.p2	D28599|Vcan|13003|versican	D32040|Vcan|13003|versican
mm9_v1_chr11_-_70135960_70136019	0.459846	BPTF.p2	U39200|Alox12e|11685|arachidonate lipoxygenase, epidermal	AK138743|Alox12e|11685|arachidonate lipoxygenase, epidermal	BC013751|Alox12e|11685|arachidonate lipoxygenase, epidermal	BC051047|Alox12e|11685|arachidonate lipoxygenase, epidermal	NM_145684|Alox12e|11685|arachidonate lipoxygenase, epidermal	X99252|Alox12e|11685|arachidonate lipoxygenase, epidermal
mm9_v1_chrX_-_104035877_104035981	0.459833	BPTF.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr2_-_126444323_126444348	0.458995	BPTF.p2	AF109137|Hdc|15186|histidine decarboxylase
mm9_v1_chr4_-_82531027_82531054	0.458738	BPTF.p2	AF035579|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC145993|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC132431|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	AF031896|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	NM_009887|Cer1|12622|cerberus 1 homolog (Xenopus laevis)
mm9_v1_chr15_-_83000931_83000939	0.458373	BPTF.p2	AK010858|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr9_-_13631432_13631439	0.457805	BPTF.p2	AK019414|Cep57|74360|centrosomal protein 57	AK167523|Cep57|74360|centrosomal protein 57
mm9_v1_chr3_-_129672992_129673123	0.457558	BPTF.p2	AK152326|Ccdc109b|66815|coiled-coil domain containing 109B	AK018492|Ccdc109b|66815|coiled-coil domain containing 109B	AK150995|Ccdc109b|66815|coiled-coil domain containing 109B	AK154338|Ccdc109b|66815|coiled-coil domain containing 109B	AK150724|Ccdc109b|66815|coiled-coil domain containing 109B	AK151201|Ccdc109b|66815|coiled-coil domain containing 109B	AK151915|Ccdc109b|66815|coiled-coil domain containing 109B	BC049571|Ccdc109b|66815|coiled-coil domain containing 109B	NM_025779|Ccdc109b|66815|coiled-coil domain containing 109B
mm9_v1_chr10_-_92185071_92185164	0.456182	BPTF.p2	BC066870|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	D10712|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK090040|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK048393|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK085355|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	BC052430|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK010591|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	NM_008682|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK153746|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1
mm9_v1_chr2_+_80171439_80171527	0.456079	BPTF.p2	AK190686|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK204346|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK206826|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	BC002207|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr13_+_23830944_23831229	0.455637	BPTF.p2	AK135614|Hist1h1c|50708|histone cluster 1, H1c	AK209931|Hist1h1c|50708|histone cluster 1, H1c	AK211271|Hist1h1c|50708|histone cluster 1, H1c	AK210230|Hist1h1c|50708|histone cluster 1, H1c
mm9_v1_chr4_+_64785795_64785812	0.45466	BPTF.p2	AF439513|Pappa|18491|pregnancy-associated plasma protein A	AF439514|Pappa|18491|pregnancy-associated plasma protein A
mm9_v1_chr5_-_115273443_115273497	0.454482	BPTF.p2	AK148078|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC089033|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC096574|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	AK012147|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	NM_181075|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene
mm9_v1_chr16_+_20141134_20141212	0.453826	BPTF.p2	NM_001033237|Yeats2|208146|YEATS domain containing 2	NM_001145930|Yeats2|208146|YEATS domain containing 2	NM_001145931|Yeats2|208146|YEATS domain containing 2	AK165933|Yeats2|208146|YEATS domain containing 2	AK160791|Yeats2|208146|YEATS domain containing 2
mm9_v1_chrX_+_159216296_159216363	0.453134	BPTF.p2	AK181761|Rbbp7|245688|retinoblastoma binding protein 7	AK206140|Rbbp7|245688|retinoblastoma binding protein 7	AK213569|Rbbp7|245688|retinoblastoma binding protein 7	AK207469|Rbbp7|245688|retinoblastoma binding protein 7	AK208251|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr11_+_29593657_29593773	0.453072	BPTF.p2	AK211699|Rtn4|68585|reticulon 4	AK218123|Rtn4|68585|reticulon 4	AY102280|Rtn4|68585|reticulon 4	NM_194051|Rtn4|68585|reticulon 4
mm9_v1_chr8_-_112261607_112261664	0.452999	BPTF.p2	AK089170|Atxn1l|52335|ataxin 1-like	NM_001080930|Atxn1l|52335|ataxin 1-like	AK172521|Atxn1l|52335|ataxin 1-like
mm9_v1_chr15_-_10415578_10415691	0.452818	BPTF.p2	AK002985|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	BC014832|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	AK168325|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	AK088313|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	NM_026396|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm9_v1_chr8_-_125842456_125842475	0.45245	BPTF.p2	AK082847|Fanca|14087|Fanconi anemia, complementation group A	AK084990|Fanca|14087|Fanconi anemia, complementation group A	AK166112|Fanca|14087|Fanconi anemia, complementation group A	AF208122|Fanca|14087|Fanconi anemia, complementation group A	AF178934|Fanca|14087|Fanconi anemia, complementation group A	BC150705|Fanca|14087|Fanconi anemia, complementation group A	AF208116|Fanca|14087|Fanconi anemia, complementation group A	AF208118|Fanca|14087|Fanconi anemia, complementation group A	NM_016925|Fanca|14087|Fanconi anemia, complementation group A
mm9_v1_chr6_+_113481672_113481700	0.451932	BPTF.p2	NM_001033244|Fancd2|211651|Fanconi anemia, complementation group D2	AK142384|Fancd2|211651|Fanconi anemia, complementation group D2	BC139004|Fancd2|211651|Fanconi anemia, complementation group D2	AK019136|Fancd2|211651|Fanconi anemia, complementation group D2	AK155602|Fancd2|211651|Fanconi anemia, complementation group D2	AK166411|Fancd2|211651|Fanconi anemia, complementation group D2
mm9_v1_chr5_-_108026906_108026906	0.451786	BPTF.p2	AK034160|Glmn|170823|glomulin, FKBP associated protein	NM_001161738|Glmn|170823|glomulin, FKBP associated protein
mm9_v1_chr17_+_36016728_36016783	0.45141	BPTF.p2	BC009147|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC046781|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC138204|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC138205|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm9_v1_chr19_+_29175864_29175994	0.451052	BPTF.p2	AK009709|Rcl1|59028|RNA terminal phosphate cyclase-like 1	NM_021525|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK168153|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK012585|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK077751|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC053404|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC004574|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK153377|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AJ276895|Rcl1|59028|RNA terminal phosphate cyclase-like 1
mm9_v1_chr19_+_8797973_8797989	0.45101	BPTF.p2	AK036616|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK043166|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK051045|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1
mm9_v1_chr9_-_107673268_107673286	0.450125	BPTF.p2	BC043058|Rbm5|83486|RNA binding motif protein 5	BC019766|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chr6_+_28373521_28373688	0.449481	BPTF.p2	BC132452|Arf5|11844|ADP-ribosylation factor 5	BC138756|Arf5|11844|ADP-ribosylation factor 5	D87902|Arf5|11844|ADP-ribosylation factor 5	NM_007480|Arf5|11844|ADP-ribosylation factor 5
mm9_v1_chr16_-_95680888_95680987	0.448895	BPTF.p2	AK142379|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm9_v1_chr4_+_123613778_123613862	0.448638	BPTF.p2	AK003876|Rragc|54170|Ras-related GTP binding C	AK196968|Rragc|54170|Ras-related GTP binding C	AK177349|Rragc|54170|Ras-related GTP binding C	AK196201|Rragc|54170|Ras-related GTP binding C	AK204008|Rragc|54170|Ras-related GTP binding C	AK213206|Rragc|54170|Ras-related GTP binding C
mm9_v1_chr9_-_118059168_118059218	0.447729	BPTF.p2	BC056653|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	AK020626|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	NM_026442|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	AK002667|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	AK011760|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr16_-_57606866_57606989	0.447718	BPTF.p2	BC038891|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	BC038682|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019808|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK080386|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK003195|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019979|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK012168|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK136657|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	NM_025599|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene
mm9_v1_chr2_+_173902521_173902654	0.447553	BPTF.p2	AK078110|Stx16|228960|syntaxin 16	NM_001102423|Stx16|228960|syntaxin 16	NM_001102424|Stx16|228960|syntaxin 16	NM_001102425|Stx16|228960|syntaxin 16	NM_172675|Stx16|228960|syntaxin 16	BC094436|Stx16|228960|syntaxin 16	BC095989|Stx16|228960|syntaxin 16	BC138544|Stx16|228960|syntaxin 16
mm9_v1_chr10_+_68186493_68186584	0.44742	BPTF.p2	AK028283|Tmem26|327766|transmembrane protein 26	NM_177794|Tmem26|327766|transmembrane protein 26	AK084351|Tmem26|327766|transmembrane protein 26	AK143866|Tmem26|327766|transmembrane protein 26	BC117502|Tmem26|327766|transmembrane protein 26	BC117503|Tmem26|327766|transmembrane protein 26
mm9_v1_chr2_-_91076891_91077222	0.447148	BPTF.p2	BC028955|Ddb2|107986|damage specific DNA binding protein 2	BC099410|Ddb2|107986|damage specific DNA binding protein 2	BC080821|Ddb2|107986|damage specific DNA binding protein 2	AK011756|Ddb2|107986|damage specific DNA binding protein 2	AK158770|Ddb2|107986|damage specific DNA binding protein 2	AY027937|Ddb2|107986|damage specific DNA binding protein 2	AK161986|Ddb2|107986|damage specific DNA binding protein 2	NM_028119|Ddb2|107986|damage specific DNA binding protein 2
mm9_v1_chr7_+_97575023_97575086	0.446964	BPTF.p2	BC060150|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chr10_+_85484933_85484965	0.446603	BPTF.p2	AK150190|Fbxo7|69754|F-box protein 7	AK147907|Fbxo7|69754|F-box protein 7
mm9_v1_chr6_+_97160749_97160814	0.446535	BPTF.p2	AF421860|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK077826|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	NM_022992|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK076519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK088205|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF133912|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	BC003897|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK008519|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AK005259|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5	AF265214|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr9_+_79914685_79914721	0.445743	BPTF.p2	AK053904|Senp6|215351|SUMO/sentrin specific peptidase 6	NM_146003|Senp6|215351|SUMO/sentrin specific peptidase 6
mm9_v1_chr9_-_13631343_13631398	0.445563	BPTF.p2	AY225093|Cep57|74360|centrosomal protein 57	AK028458|Cep57|74360|centrosomal protein 57	AK028408|Cep57|74360|centrosomal protein 57
mm9_v1_chr6_+_142563114_142563114	0.44403	BPTF.p2	AK019938|5330439B14Rik|321015|RIKEN cDNA 5330439B14 gene	NM_177314|5330439B14Rik|321015|RIKEN cDNA 5330439B14 gene
mm9_v1_chr2_+_74707394_74707441	0.443285	BPTF.p2	AK207939|Mtx2|53375|metaxin 2	AK212612|Mtx2|53375|metaxin 2	AK216047|Mtx2|53375|metaxin 2
mm9_v1_chr19_+_12535268_12535270	0.443246	BPTF.p2	AK030216|Mpeg1|17476|macrophage expressed gene 1	NM_010821|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr6_+_135313056_135313087	0.443109	BPTF.p2	AK168806|Emp1|13730|epithelial membrane protein 1	U25633|Emp1|13730|epithelial membrane protein 1	BC138491|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr17_+_6893421_6893421	0.443058	BPTF.p2	BC106102|Sytl3|83672|synaptotagmin-like 3	NM_183370|Sytl3|83672|synaptotagmin-like 3
mm9_v1_chr4_+_154975473_154975535	0.442656	BPTF.p2	AK080215|Slc35e2|320541|solute carrier family 35, member E2	BC058728|Slc35e2|320541|solute carrier family 35, member E2	NM_177186|Slc35e2|320541|solute carrier family 35, member E2
mm9_v1_chr11_-_20612281_20612323	0.442193	BPTF.p2	AK150458|Aftph|216549|aftiphilin	AK152308|Aftph|216549|aftiphilin	AK152487|Aftph|216549|aftiphilin	AK161532|Aftph|216549|aftiphilin
mm9_v1_chr9_-_78435778_78435821	0.44214	BPTF.p2	AK169868|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	BC058785|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5
mm9_v1_chr2_-_120862405_120862570	0.441839	BPTF.p2	AK158219|Epb4.2|13828|erythrocyte protein band 4.2	AK158370|Epb4.2|13828|erythrocyte protein band 4.2	AK165288|Epb4.2|13828|erythrocyte protein band 4.2	AK172410|Epb4.2|13828|erythrocyte protein band 4.2	AK158247|Epb4.2|13828|erythrocyte protein band 4.2	BC053739|Epb4.2|13828|erythrocyte protein band 4.2	AK143841|Epb4.2|13828|erythrocyte protein band 4.2	L35933|Epb4.2|13828|erythrocyte protein band 4.2	BC066194|Epb4.2|13828|erythrocyte protein band 4.2	BC066806|Epb4.2|13828|erythrocyte protein band 4.2	NM_013513|Epb4.2|13828|erythrocyte protein band 4.2	U04055|Epb4.2|13828|erythrocyte protein band 4.2	AK133896|Epb4.2|13828|erythrocyte protein band 4.2	AK137484|Epb4.2|13828|erythrocyte protein band 4.2
mm9_v1_chr7_-_108709378_108709380	0.44177	BPTF.p2	AK018555|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chr19_-_5295389_5295474	0.441564	BPTF.p2	BC029745|Sf3b2|319322|splicing factor 3b, subunit 2	AK151354|Sf3b2|319322|splicing factor 3b, subunit 2	AK019282|Sf3b2|319322|splicing factor 3b, subunit 2	AK152965|Sf3b2|319322|splicing factor 3b, subunit 2	AK012009|Sf3b2|319322|splicing factor 3b, subunit 2	AK150961|Sf3b2|319322|splicing factor 3b, subunit 2	AK159893|Sf3b2|319322|splicing factor 3b, subunit 2	AK011613|Sf3b2|319322|splicing factor 3b, subunit 2	BC045207|Sf3b2|319322|splicing factor 3b, subunit 2	AK146540|Sf3b2|319322|splicing factor 3b, subunit 2	AK152327|Sf3b2|319322|splicing factor 3b, subunit 2	AK146864|Sf3b2|319322|splicing factor 3b, subunit 2	AK147687|Sf3b2|319322|splicing factor 3b, subunit 2	AK149776|Sf3b2|319322|splicing factor 3b, subunit 2	AK012643|Sf3b2|319322|splicing factor 3b, subunit 2	AK142136|Sf3b2|319322|splicing factor 3b, subunit 2	AK146063|Sf3b2|319322|splicing factor 3b, subunit 2	BC049118|Sf3b2|319322|splicing factor 3b, subunit 2	NM_030109|Sf3b2|319322|splicing factor 3b, subunit 2
mm9_v1_chr13_-_101262292_101262366	0.441148	BPTF.p2	BC016231|Gtf2h2|23894|general transcription factor II H, polypeptide 2	AK154739|Gtf2h2|23894|general transcription factor II H, polypeptide 2	AK145720|Gtf2h2|23894|general transcription factor II H, polypeptide 2
mm9_v1_chr4_-_11003327_11003375	0.440811	BPTF.p2	AK009547|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene	AK041507|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene	NM_001085493|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene
mm9_v1_chr7_+_134439888_134439975	0.439969	BPTF.p2	AK155566|Itgal|16408|integrin alpha L	AK171389|Itgal|16408|integrin alpha L	M60778|Itgal|16408|integrin alpha L	BC145094|Itgal|16408|integrin alpha L	BC145095|Itgal|16408|integrin alpha L	BC145096|Itgal|16408|integrin alpha L	BC145802|Itgal|16408|integrin alpha L	AF065901|Itgal|16408|integrin alpha L	AF065902|Itgal|16408|integrin alpha L	AK152913|Itgal|16408|integrin alpha L
mm9_v1_chr6_-_146450399_146450533	0.439898	BPTF.p2	AB012393|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	GU980658|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	AB182288|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	AB182290|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	NM_010586|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2	NM_019923|Itpr2|16439|inositol 1,4,5-triphosphate receptor 2
mm9_v1_chr10_+_93103715_93103796	0.439792	BPTF.p2	NM_021320|Ntn4|57764|netrin 4
mm9_v1_chr12_-_82695944_82695966	0.438921	BPTF.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr9_+_37335673_37335728	0.438327	BPTF.p2	NM_027102|Esam|69524|endothelial cell-specific adhesion molecule	AK156399|Esam|69524|endothelial cell-specific adhesion molecule	BC019460|Esam|69524|endothelial cell-specific adhesion molecule	BC049249|Esam|69524|endothelial cell-specific adhesion molecule	AK009223|Esam|69524|endothelial cell-specific adhesion molecule	AF361882|Esam|69524|endothelial cell-specific adhesion molecule
mm9_v1_chr9_+_61220162_61220251	0.438046	BPTF.p2	NM_001083927|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_001083928|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_009389|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm9_v1_chr8_+_107572489_107572523	0.437441	BPTF.p2	NM_001164681|Ces3a|382053|carboxylesterase 3A	NM_198672|Ces3a|382053|carboxylesterase 3A	AK138932|Ces3a|382053|carboxylesterase 3A	BC061004|Ces3a|382053|carboxylesterase 3A	BC035526|Ces3a|382053|carboxylesterase 3A	BC057187|Ces3a|382053|carboxylesterase 3A	BC057188|Ces3a|382053|carboxylesterase 3A	BC048380|Ces3a|382053|carboxylesterase 3A	L11333|Ces3a|382053|carboxylesterase 3A	S64130|Ces3a|382053|carboxylesterase 3A
mm9_v1_chr8_-_48799252_48799297	0.43588	BPTF.p2	AK048437|Cdkn2aip|70925|CDKN2A interacting protein	AK078329|Cdkn2aip|70925|CDKN2A interacting protein	AK167684|Cdkn2aip|70925|CDKN2A interacting protein	AK133831|Cdkn2aip|70925|CDKN2A interacting protein	NM_172407|Cdkn2aip|70925|CDKN2A interacting protein	AK035426|Cdkn2aip|70925|CDKN2A interacting protein	AK089057|Cdkn2aip|70925|CDKN2A interacting protein
mm9_v1_chr15_-_8394462_8394663	0.43583	BPTF.p2	AJ627033|Nipbl|71175|Nipped-B homolog (Drosophila)	AJ640138|Nipbl|71175|Nipped-B homolog (Drosophila)	NM_027707|Nipbl|71175|Nipped-B homolog (Drosophila)	NM_201232|Nipbl|71175|Nipped-B homolog (Drosophila)
mm9_v1_chr11_-_82834223_82834322	0.435386	BPTF.p2	BC152549|Slfn8|276950|schlafen 8	NM_001167743|Slfn8|276950|schlafen 8	AY261799|Slfn8|276950|schlafen 8	AY261798|Slfn8|276950|schlafen 8	NM_181545|Slfn8|276950|schlafen 8
mm9_v1_chr1_-_34899878_34899900	0.434496	BPTF.p2	AK220453|Fam168b|214469|family with sequence similarity 168, member B	NM_001160235|Fam168b|214469|family with sequence similarity 168, member B	NM_001160236|Fam168b|214469|family with sequence similarity 168, member B	NM_174997|Fam168b|214469|family with sequence similarity 168, member B
mm9_v1_chr17_+_56098521_56098583	0.433657	BPTF.p2	AK168621|Ccdc94|72886|coiled-coil domain containing 94
mm9_v1_chr9_-_108551631_108551731	0.433427	BPTF.p2	AK165028|Arih2|23807|ariadne homolog 2 (Drosophila)	AK149936|Arih2|23807|ariadne homolog 2 (Drosophila)	BC051998|Arih2|23807|ariadne homolog 2 (Drosophila)	BC052422|Arih2|23807|ariadne homolog 2 (Drosophila)	NM_011790|Arih2|23807|ariadne homolog 2 (Drosophila)	AK011094|Arih2|23807|ariadne homolog 2 (Drosophila)	AK168055|Arih2|23807|ariadne homolog 2 (Drosophila)
mm9_v1_chr11_+_46564012_46564012	0.433213	BPTF.p2	AK133466|Havcr1|171283|hepatitis A virus cellular receptor 1	NM_001166631|Havcr1|171283|hepatitis A virus cellular receptor 1
mm9_v1_chr19_-_7877136_7877156	0.432555	BPTF.p2	BC014805|BC014805|236149|cDNA sequence BC014805	NM_146232|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr4_+_130219299_130219334	0.43217	BPTF.p2	BC050747|Pum1|80912|pumilio 1 (Drosophila)	AK147185|Pum1|80912|pumilio 1 (Drosophila)	AF321909|Pum1|80912|pumilio 1 (Drosophila)	BC048174|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr7_+_52872975_52872999	0.431525	BPTF.p2	AK137638|Fut1|14343|fucosyltransferase 1	NM_008051|Fut1|14343|fucosyltransferase 1	BC109145|Fut1|14343|fucosyltransferase 1	BC109146|Fut1|14343|fucosyltransferase 1
mm9_v1_chr1_-_84741605_84741713	0.431393	BPTF.p2	BC004085|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr9_-_100935259_100935321	0.430933	BPTF.p2	BC026531|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AF327060|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	BC037082|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	BC055946|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK050366|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK004976|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	NM_025835|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide	AK134437|Pccb|66904|propionyl Coenzyme A carboxylase, beta polypeptide
mm9_v1_chr6_-_24477549_24477560	0.430743	BPTF.p2	AK008156|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008286|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008414|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019242|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	BC028633|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008155|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009396|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009461|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009493|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009608|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009652|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010024|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010090|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019084|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019201|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019215|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019291|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019354|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr14_-_33278035_33278035	0.430605	BPTF.p2	AK158592|Slc18a3|20508|solute carrier family 18 (vesicular monoamine), member 3	NM_021712|Slc18a3|20508|solute carrier family 18 (vesicular monoamine), member 3
mm9_v1_chr18_-_46372017_46372260	0.429695	BPTF.p2	AY251389|Trim36|28105|tripartite motif-containing 36	AB103063|Trim36|28105|tripartite motif-containing 36	BC058106|Trim36|28105|tripartite motif-containing 36	NM_178872|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr8_-_89409079_89409204	0.428882	BPTF.p2	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr11_+_86014819_86014963	0.428825	BPTF.p2	BC067002|4632419I22Rik|74038|RIKEN cDNA 4632419I22 gene	AK078546|4632419I22Rik|74038|RIKEN cDNA 4632419I22 gene	AK132401|4632419I22Rik|74038|RIKEN cDNA 4632419I22 gene	AK084670|4632419I22Rik|74038|RIKEN cDNA 4632419I22 gene	AK052488|4632419I22Rik|74038|RIKEN cDNA 4632419I22 gene
mm9_v1_chr13_+_3564316_3564379	0.427923	BPTF.p2	AF095728|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr7_-_114146118_114146118	0.427594	BPTF.p2	NM_010983|Olfr2|18317|olfactory receptor 2	S73844|Olfr2|18317|olfactory receptor 2
mm9_v1_chr2_+_84667174_84667190	0.42631	BPTF.p2	AK008088|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	NM_013899|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)
mm9_v1_chr12_-_109417393_109417565	0.426251	BPTF.p2	AK166570|Setd3|52690|SET domain containing 3	BC016123|Setd3|52690|SET domain containing 3	BC019973|Setd3|52690|SET domain containing 3	AY513271|Setd3|52690|SET domain containing 3	BC057968|Setd3|52690|SET domain containing 3	AK031371|Setd3|52690|SET domain containing 3	BC108358|Setd3|52690|SET domain containing 3	AK011993|Setd3|52690|SET domain containing 3	AK029403|Setd3|52690|SET domain containing 3	AK146777|Setd3|52690|SET domain containing 3	NM_028262|Setd3|52690|SET domain containing 3	AK170917|Setd3|52690|SET domain containing 3
mm9_v1_chr3_-_93982114_93982114	0.425488	BPTF.p2	AK139538|Gm10696|100043188|predicted gene 10696	NM_001146107|Gm10696|100043188|predicted gene 10696
mm9_v1_chr12_+_86940000_86940107	0.425415	BPTF.p2	BC019780|Jdp2|81703|Jun dimerization protein 2
mm9_v1_chr11_-_82684245_82684245	0.425403	BPTF.p2	AK128983|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164570|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr9_+_57982471_57982471	0.424648	BPTF.p2	NM_001162479|Stra6|20897|stimulated by retinoic acid gene 6
mm9_v1_chrX_-_7753020_7753088	0.424183	BPTF.p2	AK166256|Tbc1d25|209815|TBC1 domain family, member 25	AK040932|Tbc1d25|209815|TBC1 domain family, member 25	BC060178|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr2_-_25671355_25671362	0.423536	BPTF.p2	BC111823|Glt6d1|71103|glycosyltransferase 6 domain containing 1	NM_001039095|Glt6d1|71103|glycosyltransferase 6 domain containing 1	AK016765|Glt6d1|71103|glycosyltransferase 6 domain containing 1
mm9_v1_chr3_-_86352170_86352368	0.423145	BPTF.p2	BC046628|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK053645|Mab21l2|23937|mab-21-like 2 (C. elegans)	NM_011839|Mab21l2|23937|mab-21-like 2 (C. elegans)	BC058730|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK144373|Mab21l2|23937|mab-21-like 2 (C. elegans)
mm9_v1_chr11_-_69734838_69734914	0.422892	BPTF.p2	AK011306|Eif5a|276770|eukaryotic translation initiation factor 5A	AY129325|Eif5a|276770|eukaryotic translation initiation factor 5A	AY129326|Eif5a|276770|eukaryotic translation initiation factor 5A	AY129327|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166589|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166591|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_181582|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr15_+_101980990_101981035	0.422645	BPTF.p2	BC025931|Soat2|223920|sterol O-acyltransferase 2	NM_146064|Soat2|223920|sterol O-acyltransferase 2	AF078751|Soat2|223920|sterol O-acyltransferase 2
mm9_v1_chr6_+_133242233_133242233	0.4224	BPTF.p2	AK017421|5530400C23Rik|232426|RIKEN cDNA 5530400C23 gene	NM_027784|5530400C23Rik|232426|RIKEN cDNA 5530400C23 gene
mm9_v1_chr7_+_147323460_147323573	0.42163	BPTF.p2	NM_199301|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	AK144625|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	AK144453|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	AK140018|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	BC027306|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)
mm9_v1_chr11_+_115676023_115676086	0.420689	BPTF.p2	BC117762|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	BC126953|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	NM_029557|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	AK002758|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)	AK089005|Tsen54|76265|tRNA splicing endonuclease 54 homolog (S. cerevisiae)
mm9_v1_chr7_+_147404165_147404179	0.420205	BPTF.p2	AK046675|Cd163l1|244233|CD163 molecule-like 1	NM_172909|Cd163l1|244233|CD163 molecule-like 1	AK088010|Cd163l1|244233|CD163 molecule-like 1
mm9_v1_chr2_+_24132473_24132473	0.419953	BPTF.p2	AK014576|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_001146087|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_001146088|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr2_+_122141407_122141407	0.419038	BPTF.p2	NM_001099297|Duox1|99439|dual oxidase 1
mm9_v1_chr6_-_24477565_24477581	0.418947	BPTF.p2	AK009642|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019245|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019368|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019430|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009338|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009840|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009985|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010092|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019364|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019359|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009775|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr8_-_23272965_23272967	0.417254	BPTF.p2	NM_001162947|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	AF093416|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3
mm9_v1_chr4_+_118293403_118293498	0.417197	BPTF.p2	NM_026932|Ebna1bp2|69072|EBNA1 binding protein 2	BC054723|Ebna1bp2|69072|EBNA1 binding protein 2	AK007491|Ebna1bp2|69072|EBNA1 binding protein 2	AK134732|Ebna1bp2|69072|EBNA1 binding protein 2	AK167070|Ebna1bp2|69072|EBNA1 binding protein 2	BC062876|Ebna1bp2|69072|EBNA1 binding protein 2	AK168269|Ebna1bp2|69072|EBNA1 binding protein 2
mm9_v1_chr7_-_111030754_111030754	0.416588	BPTF.p2	NM_013618|Olfr66|18367|olfactory receptor 66
mm9_v1_chr8_+_109206967_109207060	0.416393	BPTF.p2	AK085030|Tmco7|272538|transmembrane and coiled-coil domains 7	NM_173037|Tmco7|272538|transmembrane and coiled-coil domains 7	AK077757|Tmco7|272538|transmembrane and coiled-coil domains 7	AK054283|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066134|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066869|Tmco7|272538|transmembrane and coiled-coil domains 7	BC069838|Tmco7|272538|transmembrane and coiled-coil domains 7	AK076373|Tmco7|272538|transmembrane and coiled-coil domains 7	AK173250|Tmco7|272538|transmembrane and coiled-coil domains 7
mm9_v1_chr11_+_64248779_64248833	0.416356	BPTF.p2	BC094320|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	AK051284|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	NM_178870|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
mm9_v1_chr1_-_30930715_30930760	0.416249	BPTF.p2	AK133490|Phf3|213109|PHD finger protein 3
mm9_v1_chr1_+_74200562_74200594	0.4162	BPTF.p2	AK158234|Cxcr2|12765|chemokine (C-X-C motif) receptor 2	NM_009909|Cxcr2|12765|chemokine (C-X-C motif) receptor 2	D17630|Cxcr2|12765|chemokine (C-X-C motif) receptor 2	BC051677|Cxcr2|12765|chemokine (C-X-C motif) receptor 2
mm9_v1_chr13_-_74199688_74199784	0.414666	BPTF.p2	BC080681|Cep72|74470|centrosomal protein 72	BC060686|Cep72|74470|centrosomal protein 72	AK017134|Cep72|74470|centrosomal protein 72	AK034892|Cep72|74470|centrosomal protein 72	NM_028959|Cep72|74470|centrosomal protein 72
mm9_v1_chr6_-_55082834_55083009	0.414394	BPTF.p2	FJ548565|Crhr2|12922|corticotropin releasing hormone receptor 2	U17858|Crhr2|12922|corticotropin releasing hormone receptor 2	BC137592|Crhr2|12922|corticotropin releasing hormone receptor 2	U21729|Crhr2|12922|corticotropin releasing hormone receptor 2	AK142261|Crhr2|12922|corticotropin releasing hormone receptor 2	NM_009953|Crhr2|12922|corticotropin releasing hormone receptor 2	U19939|Crhr2|12922|corticotropin releasing hormone receptor 2	AK085854|Crhr2|12922|corticotropin releasing hormone receptor 2
mm9_v1_chr12_-_86715612_86715842	0.414314	BPTF.p2	AK150605|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152656|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC064755|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC085097|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK003676|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK084117|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152643|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	NM_026775|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chrX_+_54307050_54307082	0.414273	BPTF.p2	AK011234|Htatsf1|72459|HIV TAT specific factor 1	AK005527|Htatsf1|72459|HIV TAT specific factor 1	AK139853|Htatsf1|72459|HIV TAT specific factor 1	AK049495|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr4_+_146927385_146927415	0.414232	BPTF.p2	NM_001014397|Gm13154|433804|predicted gene 13154	BC085112|Gm13154|433804|predicted gene 13154
mm9_v1_chr10_-_60895686_60895691	0.414191	BPTF.p2	AK147814|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr7_-_110926856_110926856	0.414118	BPTF.p2	NM_013620|Olfr68|18369|olfactory receptor 68
mm9_v1_chrX_-_72661900_72661926	0.413669	BPTF.p2	AK142198|Mtcp1|17763|mature T-cell proliferation 1	AK140533|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr6_-_24477545_24477547	0.413364	BPTF.p2	AK011579|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK011947|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019207|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr4_-_143998305_143998366	0.413125	BPTF.p2	AK167683|Pramef12|77632|PRAME family member 12	BC066168|Pramef12|77632|PRAME family member 12	AK019795|Pramef12|77632|PRAME family member 12	NM_029948|Pramef12|77632|PRAME family member 12
mm9_v1_chr17_-_74715708_74715816	0.412693	BPTF.p2	NM_001146222|Dpy30|66310|dpy-30 homolog (C. elegans)	BC002240|Dpy30|66310|dpy-30 homolog (C. elegans)	AK013073|Dpy30|66310|dpy-30 homolog (C. elegans)	AK077902|Dpy30|66310|dpy-30 homolog (C. elegans)	NM_001146223|Dpy30|66310|dpy-30 homolog (C. elegans)
mm9_v1_chr17_-_25998327_25998452	0.412297	BPTF.p2	AK129465|Wdr90|106618|WD repeat domain 90	AK154827|Wdr90|106618|WD repeat domain 90	AK036541|Wdr90|106618|WD repeat domain 90	AK170906|Wdr90|106618|WD repeat domain 90
mm9_v1_chr18_+_84257471_84257589	0.412121	BPTF.p2	AK083082|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	AK047559|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	AK081988|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	BC116427|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	BC116428|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2	NM_146090|Zadh2|225791|zinc binding alcohol dehydrogenase, domain containing 2
mm9_v1_chr5_+_138478451_138478466	0.411414	BPTF.p2	AK133180|Smok3b|622474|sperm motility kinase 3B	NM_001039889|Smok3b|622474|sperm motility kinase 3B	AJ245454|Smok3a|545814|sperm motility kinase 3A
mm9_v1_chr8_-_85297983_85298058	0.411196	BPTF.p2	BC030675|Zfp330|30932|zinc finger protein 330	BC008086|Zfp330|30932|zinc finger protein 330	NM_145600|Zfp330|30932|zinc finger protein 330	AK050534|Zfp330|30932|zinc finger protein 330	AK086617|Zfp330|30932|zinc finger protein 330	BC083081|Zfp330|30932|zinc finger protein 330
mm9_v1_chr6_-_122692754_122692762	0.41074	BPTF.p2	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr14_+_41964744_41964800	0.410621	BPTF.p2	NM_010775|Mbl1|17194|mannose-binding lectin (protein A) 1	S42292|Mbl1|17194|mannose-binding lectin (protein A) 1	AK034788|Mbl1|17194|mannose-binding lectin (protein A) 1	BC012245|Mbl1|17194|mannose-binding lectin (protein A) 1	BC021762|Mbl1|17194|mannose-binding lectin (protein A) 1	D11441|Mbl1|17194|mannose-binding lectin (protein A) 1
mm9_v1_chr14_+_47504276_47504358	0.410392	BPTF.p2	AK034323|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr11_-_23419100_23419194	0.410371	BPTF.p2	AK007052|1700093K21Rik|67358|RIKEN cDNA 1700093K21 gene	BC049567|1700093K21Rik|67358|RIKEN cDNA 1700093K21 gene	NM_026105|1700093K21Rik|67358|RIKEN cDNA 1700093K21 gene
mm9_v1_chr1_-_55084321_55084327	0.409883	BPTF.p2	NM_031179|Sf3b1|81898|splicing factor 3b, subunit 1	AB037890|Sf3b1|81898|splicing factor 3b, subunit 1	AK165992|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr7_+_113988126_113988127	0.40929	BPTF.p2	NM_146596|Olfr703|258589|olfactory receptor 703	BC111815|Olfr703|258589|olfactory receptor 703
mm9_v1_chr8_-_86781160_86781224	0.408946	BPTF.p2	AK144807|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK007709|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	BC025049|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK010538|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK013882|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK164894|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK164635|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	NM_026423|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	AK047287|Mri1|67873|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)
mm9_v1_chr2_-_120557235_120557264	0.408661	BPTF.p2	BC117555|Cdan1|68968|congenital dyserythropoietic anemia, type I (human)	AK157271|Cdan1|68968|congenital dyserythropoietic anemia, type I (human)	NM_026891|Cdan1|68968|congenital dyserythropoietic anemia, type I (human)
mm9_v1_chr9_+_55388955_55389013	0.408217	BPTF.p2	NM_027397|Isl2|104360|insulin related protein 2 (islet 2)	AK013964|Isl2|104360|insulin related protein 2 (islet 2)	BC120880|Isl2|104360|insulin related protein 2 (islet 2)	BC148307|Isl2|104360|insulin related protein 2 (islet 2)
mm9_v1_chr2_+_167247181_167247253	0.40651	BPTF.p2	AB089793|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	BC030879|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK049410|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK051791|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	NM_148929|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	NM_178371|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK004622|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK037377|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK173069|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK018301|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK160826|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	BC058947|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AK143281|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8	AF482993|Slc9a8|77031|solute carrier family 9 (sodium/hydrogen exchanger), member 8
mm9_v1_chr15_+_78905615_78905693	0.405973	BPTF.p2	AJ310346|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	AK075584|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	NM_145139|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	AK168295|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	AK168009|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	AK150895|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	AK151175|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	AK167640|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L	AK032936|Eif3l|223691|eukaryotic translation initiation factor 3, subunit L
mm9_v1_chr9_+_44448105_44448130	0.405848	BPTF.p2	AK003265|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr14_-_76956445_76956583	0.404192	BPTF.p2	AY425619|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	NM_001160326|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2	AK012850|Serp2|72661|stress-associated endoplasmic reticulum protein family member 2
mm9_v1_chr5_-_24348170_24348237	0.404174	BPTF.p2	AY197373|Rheb|19744|Ras homolog enriched in brain	NM_053075|Rheb|19744|Ras homolog enriched in brain	BC012273|Rheb|19744|Ras homolog enriched in brain	AK151213|Rheb|19744|Ras homolog enriched in brain	AB039919|Rheb|19744|Ras homolog enriched in brain
mm9_v1_chr14_+_33647147_33647147	0.403576	BPTF.p2	NM_001164485|Fam170b|105511|family with sequence similarity 170, member B
mm9_v1_chr4_+_140857147_140857182	0.402438	BPTF.p2	AK137704|Epha2|13836|Eph receptor A2	AK144202|Epha2|13836|Eph receptor A2	NM_010139|Epha2|13836|Eph receptor A2	U07634|Epha2|13836|Eph receptor A2	BC140960|Epha2|13836|Eph receptor A2	X78339|Epha2|13836|Eph receptor A2
mm9_v1_chr3_+_19088109_19088272	0.40184	BPTF.p2	DQ369744|Mtfr1|67472|mitochondrial fission regulator 1	AK075992|Mtfr1|67472|mitochondrial fission regulator 1	AK018048|Mtfr1|67472|mitochondrial fission regulator 1	AK004846|Mtfr1|67472|mitochondrial fission regulator 1	NM_026182|Mtfr1|67472|mitochondrial fission regulator 1	AK075822|Mtfr1|67472|mitochondrial fission regulator 1	AK009195|Mtfr1|67472|mitochondrial fission regulator 1	AK134822|Mtfr1|67472|mitochondrial fission regulator 1	BC019971|Mtfr1|67472|mitochondrial fission regulator 1
mm9_v1_chr1_-_122167658_122167658	0.401506	BPTF.p2	AK167028|Steap3|68428|STEAP family member 3	NM_001085409|Steap3|68428|STEAP family member 3
mm9_v1_chr2_+_125691964_125692075	0.401411	BPTF.p2	AK171939|Galk2|69976|galactokinase 2	BC079843|Galk2|69976|galactokinase 2	AK053002|Galk2|69976|galactokinase 2	AK154762|Galk2|69976|galactokinase 2	AK176923|Galk2|69976|galactokinase 2	AK209145|Galk2|69976|galactokinase 2
mm9_v1_chr3_-_104580464_104580464	0.400998	BPTF.p2	AK078681|Fam19a3|329731|family with sequence similarity 19, member A3	NM_183224|Fam19a3|329731|family with sequence similarity 19, member A3
mm9_v1_chr10_+_7512691_7512745	0.398273	BPTF.p2	AK017370|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	NM_026141|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014453|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK011443|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK013377|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014406|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK049634|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK164127|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167258|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK012371|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167168|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	BC079912|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4
mm9_v1_chr18_-_44334726_44334726	0.398119	BPTF.p2	AK020535|Spinkl|77424|serine protease inhibitor, Kazal type-like	NM_183123|Spinkl|77424|serine protease inhibitor, Kazal type-like
mm9_v1_chr2_+_154083589_154083614	0.397521	BPTF.p2	AK029377|4833413D08Rik|71425|RIKEN cDNA 4833413D08 gene	BC080814|4833413D08Rik|71425|RIKEN cDNA 4833413D08 gene	BC047134|4833413D08Rik|71425|RIKEN cDNA 4833413D08 gene	NM_175167|4833413D08Rik|71425|RIKEN cDNA 4833413D08 gene
mm9_v1_chr4_-_134470813_134470953	0.39736	BPTF.p2	BC094256|Tmem50a|71817|transmembrane protein 50A	NM_027935|Tmem50a|71817|transmembrane protein 50A	AK147069|Tmem50a|71817|transmembrane protein 50A	AK165636|Tmem50a|71817|transmembrane protein 50A	AK152654|Tmem50a|71817|transmembrane protein 50A	AK164989|Tmem50a|71817|transmembrane protein 50A	AK014282|Tmem50a|71817|transmembrane protein 50A	AK157214|Tmem50a|71817|transmembrane protein 50A	AK152630|Tmem50a|71817|transmembrane protein 50A
mm9_v1_chr18_-_34911152_34911201	0.396779	BPTF.p2	U15562|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	L16926|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK168287|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK141737|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	NM_009860|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AF347115|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)
mm9_v1_chr5_+_31916313_31916404	0.39676	BPTF.p2	NM_025796|Mrpl33|66845|mitochondrial ribosomal protein L33	AB049651|Mrpl33|66845|mitochondrial ribosomal protein L33	AK167883|Mrpl33|66845|mitochondrial ribosomal protein L33	AK002421|Mrpl33|66845|mitochondrial ribosomal protein L33	AK008431|Mrpl33|66845|mitochondrial ribosomal protein L33	AK021173|Mrpl33|66845|mitochondrial ribosomal protein L33	AK165856|Mrpl33|66845|mitochondrial ribosomal protein L33	BC059722|Mrpl33|66845|mitochondrial ribosomal protein L33	BC051471|Mrpl33|66845|mitochondrial ribosomal protein L33	BC027018|Mrpl33|66845|mitochondrial ribosomal protein L33	BC037363|Mrpl33|66845|mitochondrial ribosomal protein L33	BC055724|Mrpl33|66845|mitochondrial ribosomal protein L33	AK041771|Mrpl33|66845|mitochondrial ribosomal protein L33	BC006029|Mrpl33|66845|mitochondrial ribosomal protein L33
mm9_v1_chr18_-_12279951_12280047	0.395646	BPTF.p2	BC094382|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	NM_178801|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	BC137621|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK038472|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK037547|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK038419|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK031517|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK144963|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK051727|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene
mm9_v1_chr4_+_12067460_12067484	0.395012	BPTF.p2	BC050844|Rbm12b|72397|RNA binding motif protein 12B
mm9_v1_chr8_+_4613206_4613229	0.394769	BPTF.p2	BC138223|Zfp958|233987|zinc finger protein 958	BC145996|Zfp958|233987|zinc finger protein 958
mm9_v1_chr6_+_120616386_120616438	0.394353	BPTF.p2	AK137536|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)	NM_001128151|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)
mm9_v1_chr12_+_75002361_75002386	0.394054	BPTF.p2	X95580|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr7_+_97535516_97535523	0.393139	BPTF.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr7_-_38804503_38804582	0.392405	BPTF.p2	AK160558|C80913|19777|expressed sequence C80913	AK155994|C80913|19777|expressed sequence C80913	AK166566|C80913|19777|expressed sequence C80913	AK170929|C80913|19777|expressed sequence C80913	NM_011274|C80913|19777|expressed sequence C80913
mm9_v1_chr3_+_134970663_134970722	0.392328	BPTF.p2	AK029417|Nhedc2|97086|Na+/H+ exchanger domain containing 2	NM_178877|Nhedc2|97086|Na+/H+ exchanger domain containing 2	AK076505|Nhedc2|97086|Na+/H+ exchanger domain containing 2	BC090977|Nhedc2|97086|Na+/H+ exchanger domain containing 2
mm9_v1_chr8_-_75005707_75005831	0.39206	BPTF.p2	AK090231|Slc35e1|270066|solute carrier family 35, member E1	AK182855|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr8_+_23734514_23734514	0.391988	BPTF.p2	BC018400|Dkk4|234130|dickkopf homolog 4 (Xenopus laevis)	NM_145592|Dkk4|234130|dickkopf homolog 4 (Xenopus laevis)
mm9_v1_chrX_-_98417753_98417901	0.391912	BPTF.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr5_-_38108301_38108391	0.391867	BPTF.p2	BC052404|Stk32b|64293|serine/threonine kinase 32B	BC058412|Stk32b|64293|serine/threonine kinase 32B	BC056396|Stk32b|64293|serine/threonine kinase 32B	AK082468|Stk32b|64293|serine/threonine kinase 32B	NM_022416|Stk32b|64293|serine/threonine kinase 32B
mm9_v1_chr13_-_76081343_76081394	0.391814	BPTF.p2	AK081381|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr13_-_41205322_41205386	0.391553	BPTF.p2	AF081556|Gcm2|107889|glial cells missing homolog 2 (Drosophila)	NM_008104|Gcm2|107889|glial cells missing homolog 2 (Drosophila)	BC110631|Gcm2|107889|glial cells missing homolog 2 (Drosophila)	BC110632|Gcm2|107889|glial cells missing homolog 2 (Drosophila)
mm9_v1_chr6_+_149090037_149090167	0.391513	BPTF.p2	AK160463|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK029471|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC046911|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC065807|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	NM_177101|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK077292|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC048711|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK132096|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene
mm9_v1_chr1_+_21373636_21373636	0.390835	BPTF.p2	AK139842|Khdc1b|98582|KH domain containing 1B	NM_001113187|Khdc1b|98582|KH domain containing 1B
mm9_v1_chr19_-_34953810_34953944	0.390803	BPTF.p2	AK017345|Pank1|75735|pantothenate kinase 1	AF347700|Pank1|75735|pantothenate kinase 1	NM_001114339|Pank1|75735|pantothenate kinase 1
mm9_v1_chr8_+_73224288_73224388	0.390387	BPTF.p2	AK131827|Jund|16478|Jun proto-oncogene related gene d
mm9_v1_chr2_+_32817189_32817274	0.390181	BPTF.p2	AK167761|Rpl12|269261|ribosomal protein L12	NM_009076|Rpl12|269261|ribosomal protein L12	AK002973|Rpl12|269261|ribosomal protein L12	AK008347|Rpl12|269261|ribosomal protein L12	AK012349|Rpl12|269261|ribosomal protein L12	AK088464|Rpl12|269261|ribosomal protein L12	AK144905|Rpl12|269261|ribosomal protein L12	AK151532|Rpl12|269261|ribosomal protein L12	AK151592|Rpl12|269261|ribosomal protein L12	AK168121|Rpl12|269261|ribosomal protein L12	AK012428|Rpl12|269261|ribosomal protein L12	AK150318|Rpl12|269261|ribosomal protein L12	AK148566|Rpl12|269261|ribosomal protein L12	BC018321|Rpl12|269261|ribosomal protein L12	L04280|Rpl12|269261|ribosomal protein L12	BC081469|Rpl12|269261|ribosomal protein L12	BC075731|Rpl12|269261|ribosomal protein L12	BC090393|Rpl12|269261|ribosomal protein L12
mm9_v1_chr19_-_55390300_55390527	0.38891	BPTF.p2	AK179827|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK181252|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK206189|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK217393|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK185086|Zdhhc6|66980|zinc finger, DHHC domain containing 6	BC019614|Zdhhc6|66980|zinc finger, DHHC domain containing 6	BC033317|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK077693|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK139707|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK035172|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK077838|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK011373|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK144128|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK154741|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK038177|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK157494|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK010296|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK168497|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK050388|Zdhhc6|66980|zinc finger, DHHC domain containing 6	AK159304|Zdhhc6|66980|zinc finger, DHHC domain containing 6	NM_001033573|Zdhhc6|66980|zinc finger, DHHC domain containing 6	NM_025883|Zdhhc6|66980|zinc finger, DHHC domain containing 6
mm9_v1_chr12_-_82695968_82696003	0.388196	BPTF.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr10_-_77814444_77814444	0.387243	BPTF.p2	AK075715|Agpat3|28169|1-acylglycerol-3-phosphate O-acyltransferase 3	NM_053014|Agpat3|28169|1-acylglycerol-3-phosphate O-acyltransferase 3
mm9_v1_chr4_+_123582074_123582311	0.387003	BPTF.p2	BC048478|Mycbp|56309|c-myc binding protein	AK033289|Mycbp|56309|c-myc binding protein	AK077633|Mycbp|56309|c-myc binding protein	AK037661|Mycbp|56309|c-myc binding protein	AK077762|Mycbp|56309|c-myc binding protein	AK077995|Mycbp|56309|c-myc binding protein	AK145773|Mycbp|56309|c-myc binding protein	NM_019660|Mycbp|56309|c-myc binding protein	BC028344|Mycbp|56309|c-myc binding protein	AB015858|Mycbp|56309|c-myc binding protein
mm9_v1_chr10_+_128258826_128258995	0.386901	BPTF.p2	NM_025364|Sarnp|66118|SAP domain containing ribonucleoprotein	AK146248|Sarnp|66118|SAP domain containing ribonucleoprotein	AK018773|Sarnp|66118|SAP domain containing ribonucleoprotein	BC157909|Sarnp|66118|SAP domain containing ribonucleoprotein	BC158023|Sarnp|66118|SAP domain containing ribonucleoprotein	BC172063|Sarnp|66118|SAP domain containing ribonucleoprotein	AK003453|Sarnp|66118|SAP domain containing ribonucleoprotein	AK088266|Sarnp|66118|SAP domain containing ribonucleoprotein	BC027510|Sarnp|66118|SAP domain containing ribonucleoprotein	BC094393|Sarnp|66118|SAP domain containing ribonucleoprotein	AK212934|Sarnp|66118|SAP domain containing ribonucleoprotein
mm9_v1_chr13_-_4278605_4278680	0.386554	BPTF.p2	AB027237|Akr1c12|622402|aldo-keto reductase family 1, member C12	BC012643|Akr1c12|622402|aldo-keto reductase family 1, member C12	BC063780|Akr1c12|622402|aldo-keto reductase family 1, member C12	AF177041|Akr1c12|622402|aldo-keto reductase family 1, member C12	AK007716|Akr1c12|622402|aldo-keto reductase family 1, member C12	NM_013777|Akr1c12|622402|aldo-keto reductase family 1, member C12
mm9_v1_chr3_+_95091630_95092080	0.386515	BPTF.p2	BC132301|Fam63a|75007|family with sequence similarity 63, member A	BC144749|Fam63a|75007|family with sequence similarity 63, member A	AK191590|Fam63a|75007|family with sequence similarity 63, member A	AK211364|Fam63a|75007|family with sequence similarity 63, member A	AB075603|Fam63a|75007|family with sequence similarity 63, member A	BC051048|Fam63a|75007|family with sequence similarity 63, member A	BC039762|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr13_+_89680240_89680277	0.386239	BPTF.p2	AK032750|Hapln1|12950|hyaluronan and proteoglycan link protein 1	NM_013500|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr12_-_119539840_119539861	0.386185	BPTF.p2	U62522|Sp4|20688|trans-acting transcription factor 4	BC076630|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr12_-_86680251_86680341	0.385072	BPTF.p2	BC117972|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	BC117971|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AJ489828|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AK173323|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	NM_145138|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9
mm9_v1_chr7_+_13911015_13911015	0.384889	BPTF.p2	BC117808|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	BC117809|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	BC129974|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	NM_001168504|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)
mm9_v1_chr1_-_65097587_65097736	0.383928	BPTF.p2	K02584|Cryge|12968|crystallin, gamma E	BC057012|Cryge|12968|crystallin, gamma E	BC078417|Cryge|12968|crystallin, gamma E	AK014301|Cryge|12968|crystallin, gamma E	BC132506|Cryge|12968|crystallin, gamma E	BC132508|Cryge|12968|crystallin, gamma E	NM_007777|Cryge|12968|crystallin, gamma E
mm9_v1_chr14_+_56178853_56178921	0.383881	BPTF.p2	NM_133734|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK033540|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK170657|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK158784|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr13_+_95793012_95793015	0.383302	BPTF.p2	
mm9_v1_chr11_+_4795308_4795373	0.383164	BPTF.p2	AK040311|Thoc5|107829|THO complex 5	AK050734|Thoc5|107829|THO complex 5	NM_172438|Thoc5|107829|THO complex 5	BC039758|Thoc5|107829|THO complex 5	AK087099|Thoc5|107829|THO complex 5
mm9_v1_chr8_+_77617542_77617574	0.383102	BPTF.p2	AK151627|Hmox1|15368|heme oxygenase (decycling) 1	BC010757|Hmox1|15368|heme oxygenase (decycling) 1	M33203|Hmox1|15368|heme oxygenase (decycling) 1	X13356|Hmox1|15368|heme oxygenase (decycling) 1
mm9_v1_chr7_-_109636820_109636820	0.383068	BPTF.p2	NM_020289|Olfr544|257926|olfactory receptor 544
mm9_v1_chr12_-_73765729_73765833	0.38301	BPTF.p2	AK014100|Dhrs7|66375|dehydrogenase/reductase (SDR family) member 7	AK017856|Dhrs7|66375|dehydrogenase/reductase (SDR family) member 7	BC058739|Dhrs7|66375|dehydrogenase/reductase (SDR family) member 7	BC016189|Dhrs7|66375|dehydrogenase/reductase (SDR family) member 7	AK009385|Dhrs7|66375|dehydrogenase/reductase (SDR family) member 7	NM_025522|Dhrs7|66375|dehydrogenase/reductase (SDR family) member 7
mm9_v1_chr8_+_96738448_96738479	0.382995	BPTF.p2	AK169693|Nup93|71805|nucleoporin 93
mm9_v1_chr11_-_98190774_98191090	0.382695	BPTF.p2	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr12_+_101350539_101350540	0.381433	BPTF.p2	U39302|Psmc1|19179|protease (prosome, macropain) 26S subunit, ATPase 1	NM_008947|Psmc1|19179|protease (prosome, macropain) 26S subunit, ATPase 1
mm9_v1_chrX_-_72661877_72661890	0.380784	BPTF.p2	NM_001039373|Mtcp1|17763|mature T-cell proliferation 1	NM_010839|Mtcp1|17763|mature T-cell proliferation 1	U32332|Mtcp1|17763|mature T-cell proliferation 1	Z35294|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr11_+_9018509_9018554	0.38026	BPTF.p2	NM_001159402|Upp1|22271|uridine phosphorylase 1
mm9_v1_chr9_+_13632152_13632249	0.379857	BPTF.p2	AK145026|Fam76b|72826|family with sequence similarity 76, member B	BC043120|Fam76b|72826|family with sequence similarity 76, member B	NM_176836|Fam76b|72826|family with sequence similarity 76, member B	AK052430|Fam76b|72826|family with sequence similarity 76, member B	BC050870|Fam76b|72826|family with sequence similarity 76, member B
mm9_v1_chr9_-_42280256_42280323	0.379554	BPTF.p2	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr6_-_124790292_124790292	0.379416	BPTF.p2	BC018239|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3	NM_013530|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3
mm9_v1_chr10_-_117147068_117147083	0.37897	BPTF.p2	AK150530|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK152685|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK160069|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chr9_-_22272576_22272657	0.377922	BPTF.p2	BC048480|rp9|55934|retinitis pigmentosa 9 (human)
mm9_v1_chr12_-_81269174_81269180	0.3779	BPTF.p2	AK037382|Actn1|109711|actinin, alpha 1
mm9_v1_chr2_-_51790406_51790534	0.376486	BPTF.p2	BC003333|Rbm43|71684|RNA binding motif protein 43	NM_001141981|Rbm43|71684|RNA binding motif protein 43	NM_030243|Rbm43|71684|RNA binding motif protein 43
mm9_v1_chr6_+_21899614_21899692	0.376328	BPTF.p2	NM_023626|Ing3|71777|inhibitor of growth family, member 3	AY007791|Ing3|71777|inhibitor of growth family, member 3	AK080787|Ing3|71777|inhibitor of growth family, member 3	AK131993|Ing3|71777|inhibitor of growth family, member 3	BC018342|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr8_-_25686797_25686823	0.376287	BPTF.p2	BC026393|Ido2|209176|indoleamine 2,3-dioxygenase 2	EF137182|Ido2|209176|indoleamine 2,3-dioxygenase 2	NM_145949|Ido2|209176|indoleamine 2,3-dioxygenase 2
mm9_v1_chr13_-_41582649_41582707	0.376041	BPTF.p2	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr6_-_129976943_129976977	0.37586	BPTF.p2	BC116377|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	BC116822|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	BC116824|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	NM_008464|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	U10092|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	AF288378|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	NM_053154|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19
mm9_v1_chr4_-_149377238_149377303	0.374981	BPTF.p2	BC042677|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	AK159373|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	AK172249|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm9_v1_chr6_-_87793898_87794088	0.374938	BPTF.p2	AK207643|Cnbp|12785|cellular nucleic acid binding protein	AK188144|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr5_-_17341512_17341522	0.374819	BPTF.p2	AK052825|Cd36|12491|CD36 antigen
mm9_v1_chr17_+_23737822_23737907	0.374599	BPTF.p2	AK141259|Zscan10|332221|zinc finger and SCAN domain containing 10	NM_001033425|Zscan10|332221|zinc finger and SCAN domain containing 10	DQ323929|Zscan10|332221|zinc finger and SCAN domain containing 10	DQ323930|Zscan10|332221|zinc finger and SCAN domain containing 10	DQ323931|Zscan10|332221|zinc finger and SCAN domain containing 10	EF152499|Zscan10|332221|zinc finger and SCAN domain containing 10	EF152500|Zscan10|332221|zinc finger and SCAN domain containing 10	BC068284|Zscan10|332221|zinc finger and SCAN domain containing 10
mm9_v1_chr9_-_48288692_48288741	0.374518	BPTF.p2	AK007731|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	NM_024233|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)	AK090202|Rexo2|104444|REX2, RNA exonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr11_-_102994176_102994239	0.374311	BPTF.p2	
mm9_v1_chr12_-_40860769_40860814	0.373807	BPTF.p2	AK133484|Scin|20259|scinderin	AK167739|Scin|20259|scinderin	BC063328|Scin|20259|scinderin	U04354|Scin|20259|scinderin	Y13971|Scin|20259|scinderin	AK173295|Scin|20259|scinderin	AK171530|Scin|20259|scinderin	NM_001146196|Scin|20259|scinderin	NM_009132|Scin|20259|scinderin
mm9_v1_chr4_+_135502353_135502412	0.373536	BPTF.p2	NM_008254|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK144768|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK145251|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK077842|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK132035|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	AK154033|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	S65036|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase	BC025440|Hmgcl|15356|3-hydroxy-3-methylglutaryl-Coenzyme A lyase
mm9_v1_chr13_+_35751730_35751781	0.373318	BPTF.p2	NM_009881|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081260|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081261|Cdyl|12593|chromodomain protein, Y chromosome-like	BC055103|Cdyl|12593|chromodomain protein, Y chromosome-like
mm9_v1_chr19_+_6226400_6226412	0.372991	BPTF.p2	AF260740|Gpha2|170458|glycoprotein hormone alpha 2	BC062804|Gpha2|170458|glycoprotein hormone alpha 2	NM_130453|Gpha2|170458|glycoprotein hormone alpha 2	BC132274|Gpha2|170458|glycoprotein hormone alpha 2	BC132562|Gpha2|170458|glycoprotein hormone alpha 2
mm9_v1_chr16_-_22841914_22841951	0.372799	BPTF.p2	AK179171|Tbccd1|70573|TBCC domain containing 1
mm9_v1_chr1_+_19198994_19199078	0.372526	BPTF.p2	AK017373|Tcfap2b|21419|transcription factor AP-2 beta	NM_009334|Tcfap2b|21419|transcription factor AP-2 beta	AK005128|Tcfap2b|21419|transcription factor AP-2 beta	AK028906|Tcfap2b|21419|transcription factor AP-2 beta	X78197|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr8_-_112132522_112132608	0.372375	BPTF.p2	AK013102|Dhodh|56749|dihydroorotate dehydrogenase	BC027829|Dhodh|56749|dihydroorotate dehydrogenase	BC045206|Dhodh|56749|dihydroorotate dehydrogenase	NM_020046|Dhodh|56749|dihydroorotate dehydrogenase
mm9_v1_chr13_-_36209100_36209228	0.371998	BPTF.p2	BC080772|Lyrm4|380840|LYR motif containing 4	BC034664|Lyrm4|380840|LYR motif containing 4	AK050553|Lyrm4|380840|LYR motif containing 4	NM_201358|Lyrm4|380840|LYR motif containing 4
mm9_v1_chr2_+_132079092_132079159	0.371513	BPTF.p2	
mm9_v1_chrX_+_106290703_106290922	0.371482	BPTF.p2	BC043055|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	NM_019989|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK218315|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	BC034161|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151871|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK165995|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK146588|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK150604|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151095|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK049929|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151501|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AJ272504|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like
mm9_v1_chr15_-_79085177_79085186	0.370761	BPTF.p2	BC018216|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8	NM_020516|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8	AF019111|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm9_v1_chr4_+_144482979_144483095	0.370517	BPTF.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr1_-_145454821_145454855	0.370342	BPTF.p2	AK029710|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr2_+_151736942_151737067	0.369325	BPTF.p2	AK132988|Angpt4|11602|angiopoietin 4	AK154379|Angpt4|11602|angiopoietin 4	AF113707|Angpt4|11602|angiopoietin 4	BC129965|Angpt4|11602|angiopoietin 4	BC129966|Angpt4|11602|angiopoietin 4	NM_009641|Angpt4|11602|angiopoietin 4
mm9_v1_chr11_+_98799013_98799173	0.368795	BPTF.p2	S56656|Rara|19401|retinoic acid receptor, alpha	BC040383|Rara|19401|retinoic acid receptor, alpha	NM_001177302|Rara|19401|retinoic acid receptor, alpha	AK154623|Rara|19401|retinoic acid receptor, alpha
mm9_v1_chr7_-_135020290_135020344	0.368523	BPTF.p2	BC028251|Zfp668|244219|zinc finger protein 668	AK047593|Zfp668|244219|zinc finger protein 668	AK081436|Zfp668|244219|zinc finger protein 668	AK053438|Zfp668|244219|zinc finger protein 668	NM_146259|Zfp668|244219|zinc finger protein 668	AK169556|Zfp668|244219|zinc finger protein 668
mm9_v1_chr11_-_100632238_100632274	0.368205	BPTF.p2	AK143922|Ghdc|80860|GH3 domain containing	BC005639|Ghdc|80860|GH3 domain containing	AK135322|Ghdc|80860|GH3 domain containing	AF316996|Ghdc|80860|GH3 domain containing	NM_031871|Ghdc|80860|GH3 domain containing
mm9_v1_chr7_+_17401237_17401237	0.367971	BPTF.p2	AF414080|Strn4|97387|striatin, calmodulin binding protein 4	NM_001039878|Strn4|97387|striatin, calmodulin binding protein 4	NM_133789|Strn4|97387|striatin, calmodulin binding protein 4
mm9_v1_chr9_+_77602377_77602381	0.367753	BPTF.p2	AK169676|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr12_+_34000269_34000282	0.367394	BPTF.p2	AK036472|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr7_-_31606540_31606666	0.366936	BPTF.p2	AF545043|Ffar2|233079|free fatty acid receptor 2	NM_001168509|Ffar2|233079|free fatty acid receptor 2
mm9_v1_chr5_-_90652790_90652982	0.366626	BPTF.p2	BC038311|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr13_-_67601323_67601457	0.366509	BPTF.p2	BC139150|Zfp58|238693|zinc finger protein 58	BC139151|Zfp58|238693|zinc finger protein 58	AK041250|Zfp58|238693|zinc finger protein 58	AK162259|Zfp58|238693|zinc finger protein 58	AK167399|Zfp58|238693|zinc finger protein 58	NM_001007575|Zfp58|238693|zinc finger protein 58
mm9_v1_chr10_-_90579986_90580013	0.366062	BPTF.p2	AK198800|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK190863|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK184040|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK191542|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK191799|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK194450|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK194768|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK200191|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK200546|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK200877|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK202780|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK203032|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK203930|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK213202|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK215444|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK193469|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK196032|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr9_-_106350001_106350018	0.366032	BPTF.p2	NM_001110271|Abhd14a|68644|abhydrolase domain containing 14A	NM_001110272|Abhd14a|68644|abhydrolase domain containing 14A	NM_145919|Abhd14a|68644|abhydrolase domain containing 14A
mm9_v1_chr2_+_127429570_127429640	0.365951	BPTF.p2	AK047438|Mrps5|77721|mitochondrial ribosomal protein S5
mm9_v1_chr19_-_33664731_33664800	0.365484	BPTF.p2	AK170332|Lipo1|381236|lipase, member O1	AK139790|Lipo1|381236|lipase, member O1	NM_001013770|Lipo1|381236|lipase, member O1
mm9_v1_chr6_-_100621086_100621167	0.365381	BPTF.p2	BC052657|Shq1|72171|SHQ1 homolog (S. cerevisiae)	AK012978|Shq1|72171|SHQ1 homolog (S. cerevisiae)	NM_181590|Shq1|72171|SHQ1 homolog (S. cerevisiae)
mm9_v1_chr10_-_51310190_51310285	0.365238	BPTF.p2	BC147085|Fam162b|77296|family with sequence similarity 162, member B	BC147086|Fam162b|77296|family with sequence similarity 162, member B	NM_029894|Fam162b|77296|family with sequence similarity 162, member B	AK020485|Fam162b|77296|family with sequence similarity 162, member B
mm9_v1_chr2_-_87814819_87814819	0.36512	BPTF.p2	AB061229|Olfr74|117005|olfactory receptor 74	NM_054091|Olfr74|117005|olfactory receptor 74
mm9_v1_chr8_-_11008429_11008457	0.364716	BPTF.p2	NM_001081212|Irs2|384783|insulin receptor substrate 2	BC147580|Irs2|384783|insulin receptor substrate 2
mm9_v1_chr4_+_155387803_155387982	0.364416	BPTF.p2	NM_011659|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139239|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139266|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC065782|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	Z21674|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4
mm9_v1_chr13_-_41165827_41165833	0.364207	BPTF.p2	X66983|Mak|17152|male germ cell-associated kinase	NM_008547|Mak|17152|male germ cell-associated kinase
mm9_v1_chr7_-_5148348_5148348	0.363107	BPTF.p2	AF324868|Vmn1r56|81015|vomeronasal 1 receptor 56	NM_030740|Vmn1r56|81015|vomeronasal 1 receptor 56
mm9_v1_chr8_-_27056759_27056953	0.362628	BPTF.p2	BC019450|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK189846|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase	AK020410|Hgsnat|52120|heparan-alpha-glucosaminide N-acetyltransferase
mm9_v1_chr10_+_66590005_66590005	0.361331	BPTF.p2	NM_207221|Jmjd1c|108829|jumonji domain containing 1C
mm9_v1_chr2_+_83484686_83484734	0.361117	BPTF.p2	AK050782|Zc3h15|69082|zinc finger CCCH-type containing 15	BC031845|Zc3h15|69082|zinc finger CCCH-type containing 15	NM_026934|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr11_+_116735400_116735520	0.360976	BPTF.p2	AK011216|Mfsd11|69900|major facilitator superfamily domain containing 11
mm9_v1_chr4_+_153385839_153386102	0.360846	BPTF.p2	BC138462|Lrrc47|72946|leucine rich repeat containing 47	BC138463|Lrrc47|72946|leucine rich repeat containing 47	AK154897|Lrrc47|72946|leucine rich repeat containing 47	NM_201226|Lrrc47|72946|leucine rich repeat containing 47	BC094573|Lrrc47|72946|leucine rich repeat containing 47	AK129306|Lrrc47|72946|leucine rich repeat containing 47
mm9_v1_chr18_-_9282615_9282806	0.360701	BPTF.p2	AJ414562|Gjd4|225152|gap junction protein, delta 4	AK053016|Gjd4|225152|gap junction protein, delta 4	BC137984|Gjd4|225152|gap junction protein, delta 4	AK034663|Gjd4|225152|gap junction protein, delta 4	NM_153086|Gjd4|225152|gap junction protein, delta 4
mm9_v1_chr10_+_19311761_19311893	0.360685	BPTF.p2	NM_010511|Ifngr1|15979|interferon gamma receptor 1	AK087525|Ifngr1|15979|interferon gamma receptor 1	M26711|Ifngr1|15979|interferon gamma receptor 1	M28233|Ifngr1|15979|interferon gamma receptor 1	AK169593|Ifngr1|15979|interferon gamma receptor 1	J05265|Ifngr1|15979|interferon gamma receptor 1	AK151079|Ifngr1|15979|interferon gamma receptor 1	AK159359|Ifngr1|15979|interferon gamma receptor 1	AF128216|Ifngr1|15979|interferon gamma receptor 1	AF128217|Ifngr1|15979|interferon gamma receptor 1	AY157836|Ifngr1|15979|interferon gamma receptor 1	AY157837|Ifngr1|15979|interferon gamma receptor 1	AK153347|Ifngr1|15979|interferon gamma receptor 1	AK150503|Ifngr1|15979|interferon gamma receptor 1	AK152085|Ifngr1|15979|interferon gamma receptor 1	AK152384|Ifngr1|15979|interferon gamma receptor 1	AK153084|Ifngr1|15979|interferon gamma receptor 1	BC132599|Ifngr1|15979|interferon gamma receptor 1	BC138617|Ifngr1|15979|interferon gamma receptor 1	M25764|Ifngr1|15979|interferon gamma receptor 1	AK159660|Ifngr1|15979|interferon gamma receptor 1	AK159839|Ifngr1|15979|interferon gamma receptor 1	M28995|Ifngr1|15979|interferon gamma receptor 1
mm9_v1_chr2_-_33226980_33226997	0.359415	BPTF.p2	AK129123|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1	AK017939|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1	AK076767|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1	NM_175211|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1
mm9_v1_chr5_-_72559220_72559438	0.359162	BPTF.p2	AK017777|Commd8|27784|COMM domain containing 8	AK013015|Commd8|27784|COMM domain containing 8	AK170011|Commd8|27784|COMM domain containing 8	AK013371|Commd8|27784|COMM domain containing 8	BC098183|Commd8|27784|COMM domain containing 8	AK158078|Commd8|27784|COMM domain containing 8	AK009275|Commd8|27784|COMM domain containing 8	AK151560|Commd8|27784|COMM domain containing 8	AK012653|Commd8|27784|COMM domain containing 8	AK077934|Commd8|27784|COMM domain containing 8	NM_178599|Commd8|27784|COMM domain containing 8
mm9_v1_chr11_-_99146520_99146575	0.358572	BPTF.p2	GU046702|Krt24|75706|keratin 24	BC129847|Krt24|75706|keratin 24	BC129848|Krt24|75706|keratin 24	NM_029393|Krt24|75706|keratin 24	AK010165|Krt24|75706|keratin 24
mm9_v1_chrX_+_54465272_54465331	0.35826	BPTF.p2	BC119225|Cd40lg|21947|CD40 ligand	NM_011616|Cd40lg|21947|CD40 ligand	X65453|Cd40lg|21947|CD40 ligand	EU274582|Cd40lg|21947|CD40 ligand
mm9_v1_chr1_+_171899520_171899582	0.358148	BPTF.p2	AK014177|3110045C21Rik|67303|RIKEN cDNA 3110045C21 gene	AK014032|3110045C21Rik|67303|RIKEN cDNA 3110045C21 gene
mm9_v1_chr10_+_62706600_62706895	0.357829	BPTF.p2	AK147723|Herc4|67345|hect domain and RLD 4	AK143111|Herc4|67345|hect domain and RLD 4	AK009436|Herc4|67345|hect domain and RLD 4	BC043082|Herc4|67345|hect domain and RLD 4	NM_026101|Herc4|67345|hect domain and RLD 4	AK020652|Herc4|67345|hect domain and RLD 4
mm9_v1_chr9_-_107673318_107673340	0.357728	BPTF.p2	AK134183|Rbm5|83486|RNA binding motif protein 5	AK146880|Rbm5|83486|RNA binding motif protein 5	NM_148930|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chr11_-_19977305_19977316	0.355682	BPTF.p2	BC023864|Actr2|66713|ARP2 actin-related protein 2 homolog (yeast)
mm9_v1_chr8_-_89269853_89269958	0.355456	BPTF.p2	BC046317|Siah1a|20437|seven in absentia 1A	NM_009172|Siah1a|20437|seven in absentia 1A
mm9_v1_chr10_+_57370786_57370799	0.355215	BPTF.p2	BC052351|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001039050|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001190402|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	BC087894|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific
mm9_v1_chr3_+_41367672_41367775	0.354899	BPTF.p2	NM_001130185|Phf17|269424|PHD finger protein 17
mm9_v1_chr10_+_50312445_50312544	0.354878	BPTF.p2	AK144867|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	NM_001146089|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	NM_198007|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	AK052745|Ascc3|77987|activating signal cointegrator 1 complex subunit 3
mm9_v1_chr3_+_90024674_90024714	0.354298	BPTF.p2	BC027214|Rab13|68328|RAB13, member RAS oncogene family
mm9_v1_chr4_-_100937800_100937898	0.352948	BPTF.p2	AK133866|Jak1|16451|Janus kinase 1	AK141210|Jak1|16451|Janus kinase 1	AK134143|Jak1|16451|Janus kinase 1	AK143650|Jak1|16451|Janus kinase 1	S63728|Jak1|16451|Janus kinase 1	BC039752|Jak1|16451|Janus kinase 1	AK152128|Jak1|16451|Janus kinase 1	AK148521|Jak1|16451|Janus kinase 1	AK081552|Jak1|16451|Janus kinase 1	NM_146145|Jak1|16451|Janus kinase 1
mm9_v1_chr15_-_98701613_98701613	0.352664	BPTF.p2	NM_001033276|Mll2|381022|myeloid/lymphoid or mixed-lineage leukemia 2
mm9_v1_chr9_-_88987672_88987672	0.352454	BPTF.p2	NM_001170884|Trim43b|666747|tripartite motif-containing 43B
mm9_v1_chr7_-_13583329_13583480	0.351433	BPTF.p2	AF072760|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC115421|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145823|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145825|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr8_+_74763920_74764019	0.351096	BPTF.p2	AK148173|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1
mm9_v1_chr13_+_9171776_9171813	0.351084	BPTF.p2	AK148903|Larp4b|217980|La ribonucleoprotein domain family, member 4B
mm9_v1_chr12_-_100688283_100688306	0.351074	BPTF.p2	NM_183186|Foxn3|71375|forkhead box N3	AK148970|Foxn3|71375|forkhead box N3
mm9_v1_chr1_-_55084269_55084299	0.350582	BPTF.p2	AK012632|Sf3b1|81898|splicing factor 3b, subunit 1	BC037098|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr17_-_33961403_33961506	0.349677	BPTF.p2	U11248|Rps28|54127|ribosomal protein S28	BC010987|Rps28|54127|ribosomal protein S28	AK002919|Rps28|54127|ribosomal protein S28	BC090982|Rps28|54127|ribosomal protein S28	NM_016844|Rps28|54127|ribosomal protein S28	BC125644|Rps28|54127|ribosomal protein S28	BC125646|Rps28|54127|ribosomal protein S28
mm9_v1_chr4_-_26273772_26273798	0.349335	BPTF.p2	AK030141|Manea|242362|mannosidase, endo-alpha	BC067076|Manea|242362|mannosidase, endo-alpha	NM_172865|Manea|242362|mannosidase, endo-alpha
mm9_v1_chr19_-_47538692_47538733	0.348669	BPTF.p2	BC118022|Sh3pxd2a|14218|SH3 and PX domains 2A
mm9_v1_chr5_-_116474254_116474473	0.34846	BPTF.p2	AK088250|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC016398|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	NM_031869|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	AK153552|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit
mm9_v1_chr2_-_4544898_4544915	0.348311	BPTF.p2	BC019370|Prpf18|67229|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm9_v1_chr1_-_30920095_30920100	0.348222	BPTF.p2	BC011226|Phf3|213109|PHD finger protein 3	BC032205|Phf3|213109|PHD finger protein 3	BC137913|Phf3|213109|PHD finger protein 3	NM_001081080|Phf3|213109|PHD finger protein 3
mm9_v1_chr8_-_119606348_119606348	0.348048	BPTF.p2	AY164484|Pkd1l2|76645|polycystic kidney disease 1 like 2	NM_029686|Pkd1l2|76645|polycystic kidney disease 1 like 2
mm9_v1_chr5_-_23897960_23897960	0.347385	BPTF.p2	AY495541|Atg9b|213948|ATG9 autophagy related 9 homolog B (S. cerevisiae)	AY515313|Atg9b|213948|ATG9 autophagy related 9 homolog B (S. cerevisiae)	NM_001002897|Atg9b|213948|ATG9 autophagy related 9 homolog B (S. cerevisiae)
mm9_v1_chr5_-_123271207_123271281	0.347158	BPTF.p2	AK152528|Anapc5|59008|anaphase-promoting complex subunit 5	BC010339|Anapc5|59008|anaphase-promoting complex subunit 5	AK013978|Anapc5|59008|anaphase-promoting complex subunit 5	AK031432|Anapc5|59008|anaphase-promoting complex subunit 5	AK168135|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr19_-_7008874_7009004	0.346094	BPTF.p2	BC119784|Kcnk4|16528|potassium channel, subfamily K, member 4	NM_008431|Kcnk4|16528|potassium channel, subfamily K, member 4
mm9_v1_chr9_-_107673288_107673315	0.34575	BPTF.p2	AK133999|Rbm5|83486|RNA binding motif protein 5	BC042419|Rbm5|83486|RNA binding motif protein 5	BC023854|Rbm5|83486|RNA binding motif protein 5	BC054729|Rbm5|83486|RNA binding motif protein 5	BC060985|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chr15_+_80085613_80085722	0.345305	BPTF.p2	AK003001|Atf4|11911|activating transcription factor 4	NM_009716|Atf4|11911|activating transcription factor 4	BC085169|Atf4|11911|activating transcription factor 4
mm9_v1_chr19_-_8955377_8955422	0.344723	BPTF.p2	AK131892|AI462493|107197|expressed sequence AI462493	AY941793|AI462493|107197|expressed sequence AI462493	AK131602|AI462493|107197|expressed sequence AI462493	AK132116|AI462493|107197|expressed sequence AI462493	NM_001160356|AI462493|107197|expressed sequence AI462493
mm9_v1_chr11_+_95122842_95123008	0.344407	BPTF.p2	AF235035|Tac4|93670|tachykinin 4	NM_053093|Tac4|93670|tachykinin 4	BC119426|Tac4|93670|tachykinin 4	AF515827|Tac4|93670|tachykinin 4
mm9_v1_chr4_-_21694265_21694282	0.344164	BPTF.p2	AK011611|2610029I01Rik|77032|RIKEN cDNA 2610029I01 gene
mm9_v1_chr11_+_75195846_75195864	0.344137	BPTF.p2	AK173306|Smyd4|319822|SET and MYND domain containing 4
mm9_v1_chr15_+_99800504_99800504	0.34412	BPTF.p2	AK139636|Larp4|207214|La ribonucleoprotein domain family, member 4	NM_001080948|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr11_+_75401554_75401692	0.343142	BPTF.p2	AK144618|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152089|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK153569|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK167760|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK152874|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK165659|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168720|Pitpna|18738|phosphatidylinositol transfer protein, alpha	U96725|Pitpna|18738|phosphatidylinositol transfer protein, alpha	NM_008850|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK149745|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK151496|Pitpna|18738|phosphatidylinositol transfer protein, alpha	AK168187|Pitpna|18738|phosphatidylinositol transfer protein, alpha	BC056171|Pitpna|18738|phosphatidylinositol transfer protein, alpha
mm9_v1_chrY_+_234230_234474	0.34269	BPTF.p2	AK047790|Kdm5d|20592|lysine (K)-specific demethylase 5D	NM_011419|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK141096|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK140971|Kdm5d|20592|lysine (K)-specific demethylase 5D	BC060077|Kdm5d|20592|lysine (K)-specific demethylase 5D	AF127244|Kdm5d|20592|lysine (K)-specific demethylase 5D	AB221607|Kdm5d|20592|lysine (K)-specific demethylase 5D	Z29652|Kdm5d|20592|lysine (K)-specific demethylase 5D
mm9_v1_chr11_+_46564669_46564678	0.342532	BPTF.p2	NM_134248|Havcr1|171283|hepatitis A virus cellular receptor 1	AF399829|Havcr1|171283|hepatitis A virus cellular receptor 1	AF399830|Havcr1|171283|hepatitis A virus cellular receptor 1
mm9_v1_chr17_-_36098718_36098770	0.342473	BPTF.p2	AK145549|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1
mm9_v1_chr4_-_134909036_134909128	0.342373	BPTF.p2	BC094322|Srrm1|51796|serine/arginine repetitive matrix 1	BC079542|Srrm1|51796|serine/arginine repetitive matrix 1	AF062655|Srrm1|51796|serine/arginine repetitive matrix 1	AK008284|Srrm1|51796|serine/arginine repetitive matrix 1	AK028412|Srrm1|51796|serine/arginine repetitive matrix 1	NM_001130477|Srrm1|51796|serine/arginine repetitive matrix 1	NM_016799|Srrm1|51796|serine/arginine repetitive matrix 1
mm9_v1_chr7_+_50834955_50835126	0.341886	BPTF.p2	NM_172482|Zfp719|210105|zinc finger protein 719	AK044684|Zfp719|210105|zinc finger protein 719	BC081548|Zfp719|210105|zinc finger protein 719	AK083143|Zfp719|210105|zinc finger protein 719	AK020523|Zfp719|210105|zinc finger protein 719
mm9_v1_chr7_-_149415875_149415881	0.34116	BPTF.p2	BC111113|Krtap5-5|114666|keratin associated protein 5-5	NM_001037822|Krtap5-5|114666|keratin associated protein 5-5	AK020690|Krtap5-5|114666|keratin associated protein 5-5
mm9_v1_chr2_+_121782185_121782265	0.341069	BPTF.p2	AK033382|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	NM_212450|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK169248|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK044805|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK053513|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC066219|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK030085|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK041422|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK049463|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	AK160431|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	BC052660|Ctdspl2|329506|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm9_v1_chr1_+_74634915_74634982	0.340412	BPTF.p2	AK078925|Bcs1l|66821|BCS1-like (yeast)	AK079385|Bcs1l|66821|BCS1-like (yeast)	NM_025784|Bcs1l|66821|BCS1-like (yeast)	AK012324|Bcs1l|66821|BCS1-like (yeast)	BC019781|Bcs1l|66821|BCS1-like (yeast)
mm9_v1_chr11_+_70338856_70338858	0.340349	BPTF.p2	NM_008946|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr12_+_112278008_112278010	0.340231	BPTF.p2	NM_198023|Rcor1|217864|REST corepressor 1	BC042731|Rcor1|217864|REST corepressor 1
mm9_v1_chr18_+_69843730_69844096	0.340118	BPTF.p2	AK021032|Tcf4|21413|transcription factor 4	AK047926|Tcf4|21413|transcription factor 4	AK045400|Tcf4|21413|transcription factor 4	AK083152|Tcf4|21413|transcription factor 4	AK039181|Tcf4|21413|transcription factor 4	AK040346|Tcf4|21413|transcription factor 4	AK032345|Tcf4|21413|transcription factor 4
mm9_v1_chr1_-_170361525_170361683	0.339485	BPTF.p2	BC002244|Pbx1|18514|pre B-cell leukemia transcription factor 1	AB221563|Pbx1|18514|pre B-cell leukemia transcription factor 1	HM369110|Pbx1|18514|pre B-cell leukemia transcription factor 1	L27453|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr18_-_58169723_58169818	0.339095	BPTF.p2	BC063774|Fbn2|14119|fibrillin 2
mm9_v1_chr7_-_133558344_133558387	0.339052	BPTF.p2	AK172008|Cd19|12478|CD19 antigen	AK089835|Cd19|12478|CD19 antigen	AK163608|Cd19|12478|CD19 antigen	NM_009844|Cd19|12478|CD19 antigen	AK156125|Cd19|12478|CD19 antigen
mm9_v1_chr5_-_122804200_122804240	0.338925	BPTF.p2	AY297460|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	BC021784|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	NM_144912|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK081488|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK157179|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK042331|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK136504|Rad9b|231724|RAD9 homolog B (S. cerevisiae)
mm9_v1_chr11_-_78510874_78510941	0.338332	BPTF.p2	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr8_+_73300712_73300842	0.337288	BPTF.p2	AK008596|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	BC051496|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	AK162274|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	BC092380|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene	BC059891|2010320M18Rik|72093|RIKEN cDNA 2010320M18 gene
mm9_v1_chr19_-_11023721_11023751	0.337219	BPTF.p2	AB041663|Ccdc86|108673|coiled-coil domain containing 86	DQ501252|Ccdc86|108673|coiled-coil domain containing 86	AK162676|Ccdc86|108673|coiled-coil domain containing 86	AK036812|Ccdc86|108673|coiled-coil domain containing 86	AK088727|Ccdc86|108673|coiled-coil domain containing 86	BC043326|Ccdc86|108673|coiled-coil domain containing 86
mm9_v1_chr1_-_135517936_135517963	0.337211	BPTF.p2	AK003350|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chr6_+_134961629_134961652	0.336719	BPTF.p2	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr5_+_148000271_148000302	0.336373	BPTF.p2	NM_008178|Gsx1|14842|GS homeobox 1	U21224|Gsx1|14842|GS homeobox 1	BC137769|Gsx1|14842|GS homeobox 1
mm9_v1_chr2_+_78709195_78709267	0.336182	BPTF.p2	BC011477|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	NM_009454|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr7_-_108704315_108704409	0.335888	BPTF.p2	AF016462|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	AF016464|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	NM_007490|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	X52991|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	BC120753|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chr6_+_128942978_128943066	0.335886	BPTF.p2	BC051485|BC064078|408064|cDNA sequence BC064078	BC016205|BC064078|408064|cDNA sequence BC064078	BC017132|BC064078|408064|cDNA sequence BC064078	BC025095|BC064078|408064|cDNA sequence BC064078	BC038635|BC064078|408064|cDNA sequence BC064078	BC096405|BC064078|408064|cDNA sequence BC064078	BC064078|BC064078|408064|cDNA sequence BC064078	AK134020|BC064078|408064|cDNA sequence BC064078
mm9_v1_chr9_-_107673316_107673317	0.335705	BPTF.p2	AK161794|Rbm5|83486|RNA binding motif protein 5	BC054820|Rbm5|83486|RNA binding motif protein 5	BC031899|Rbm5|83486|RNA binding motif protein 5
mm9_v1_chr6_+_97160736_97160744	0.335246	BPTF.p2	D87211|Arl6ip5|65106|ADP-ribosylation factor-like 6 interacting protein 5
mm9_v1_chr2_+_22924561_22924686	0.334755	BPTF.p2	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr4_-_21694324_21694364	0.334519	BPTF.p2	AK154853|2610029I01Rik|77032|RIKEN cDNA 2610029I01 gene	NM_029840|2610029I01Rik|77032|RIKEN cDNA 2610029I01 gene
mm9_v1_chr6_-_33010151_33010266	0.333845	BPTF.p2	AK003519|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	NM_025336|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC032987|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK145337|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK006643|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC021941|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK050063|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002263|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002889|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3
mm9_v1_chr2_+_69708777_69708824	0.333827	BPTF.p2	AK200405|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chrX_-_6765768_6765839	0.333566	BPTF.p2	AK142227|Clcn5|12728|chloride channel 5	AK145763|Clcn5|12728|chloride channel 5	BC036347|Clcn5|12728|chloride channel 5	AK052990|Clcn5|12728|chloride channel 5	AF134117|Clcn5|12728|chloride channel 5	NM_016691|Clcn5|12728|chloride channel 5
mm9_v1_chr12_-_115286643_115286977	0.333493	BPTF.p2	M35502|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37557|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37558|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37559|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37560|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	Y00743|Igh-V11|16051|immunoglobulin heavy chain (V11 family)
mm9_v1_chr2_-_37225800_37225813	0.333239	BPTF.p2	AK046886|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2
mm9_v1_chr16_+_36156891_36156920	0.333171	BPTF.p2	AK050597|Stfa2l1|268885|stefin A2 like 1	NM_173869|Stfa2l1|268885|stefin A2 like 1	BC117052|Stfa2l1|268885|stefin A2 like 1	BC119354|Stfa2l1|268885|stefin A2 like 1	AY163161|Stfa2l1|268885|stefin A2 like 1
mm9_v1_chr10_-_122633922_122634056	0.333062	BPTF.p2	L10903|Usp15|14479|ubiquitin specific peptidase 15	AF468037|Usp15|14479|ubiquitin specific peptidase 15	AK145749|Usp15|14479|ubiquitin specific peptidase 15	NM_027604|Usp15|14479|ubiquitin specific peptidase 15	AK046332|Usp15|14479|ubiquitin specific peptidase 15	AK083303|Usp15|14479|ubiquitin specific peptidase 15	AK133852|Usp15|14479|ubiquitin specific peptidase 15	AK122301|Usp15|14479|ubiquitin specific peptidase 15	BC050042|Usp15|14479|ubiquitin specific peptidase 15	AK164382|Usp15|14479|ubiquitin specific peptidase 15	AK163315|Usp15|14479|ubiquitin specific peptidase 15	AK168755|Usp15|14479|ubiquitin specific peptidase 15	AK161469|Usp15|14479|ubiquitin specific peptidase 15	AK161957|Usp15|14479|ubiquitin specific peptidase 15	AK163284|Usp15|14479|ubiquitin specific peptidase 15
mm9_v1_chr7_-_107663293_107663468	0.332791	BPTF.p2	AK139680|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	BC048501|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	NM_153527|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	AF419292|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13
mm9_v1_chr18_-_37803782_37803859	0.332156	BPTF.p2	BC029673|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AF144562|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK075700|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK029380|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK076362|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK089054|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_175770|Taf7|24074|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr2_-_87332571_87332574	0.331993	BPTF.p2	BC052825|Pramel7|347712|preferentially expressed antigen in melanoma like 7	AF490343|Pramel7|347712|preferentially expressed antigen in melanoma like 7	NM_178250|Pramel7|347712|preferentially expressed antigen in melanoma like 7
mm9_v1_chr13_-_61107271_61107285	0.331228	BPTF.p2	AF136272|Ctsj|26898|cathepsin J	NM_012007|Ctsj|26898|cathepsin J	BC103769|Ctsj|26898|cathepsin J	AK005526|Ctsj|26898|cathepsin J	AK131661|Ctsj|26898|cathepsin J
mm9_v1_chr16_-_88878143_88878282	0.330752	BPTF.p2	AF345296|Krtap16-6|170655|keratin associated protein 16-6	AF345295|Krtap16-5|77918|keratin associated protein 16-5	BC115545|Krtap16-5|77918|keratin associated protein 16-5	BC115546|Krtap16-5|77918|keratin associated protein 16-5	AK020697|Krtap16-5|77918|keratin associated protein 16-5	NM_130857|Krtap16-5|77918|keratin associated protein 16-5
mm9_v1_chr13_+_27437541_27437557	0.330205	BPTF.p2	AK131668|Prl8a2|13529|prolactin family 8, subfamily a, member 2	AK146049|Prl8a2|13529|prolactin family 8, subfamily a, member 2	BC061150|Prl8a2|13529|prolactin family 8, subfamily a, member 2	AF015729|Prl8a2|13529|prolactin family 8, subfamily a, member 2	AF011385|Prl8a2|13529|prolactin family 8, subfamily a, member 2	NM_010088|Prl8a2|13529|prolactin family 8, subfamily a, member 2
mm9_v1_chr12_+_29334537_29334550	0.329974	BPTF.p2	BC019411|Rnaseh1|19819|ribonuclease H1
mm9_v1_chr3_+_81800843_81800866	0.329657	BPTF.p2	NM_021370|Accn5|58170|amiloride-sensitive cation channel 5, intestinal	Y19035|Accn5|58170|amiloride-sensitive cation channel 5, intestinal
mm9_v1_chr1_-_165242744_165242943	0.329601	BPTF.p2	AK031075|Prrx1|18933|paired related homeobox 1	AB221686|Prrx1|18933|paired related homeobox 1	X59725|Prrx1|18933|paired related homeobox 1	L06502|Prrx1|18933|paired related homeobox 1
mm9_v1_chr16_+_89206105_89206105	0.32956	BPTF.p2	AK004483|Krtap20-2|622935|keratin associated protein 20-2	NM_001163615|Krtap20-2|622935|keratin associated protein 20-2
mm9_v1_chr5_-_4104331_4104507	0.329534	BPTF.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr15_+_95621222_95621461	0.328755	BPTF.p2	BC060732|Ano6|105722|anoctamin 6	NM_175344|Ano6|105722|anoctamin 6	AK159411|Ano6|105722|anoctamin 6	AK089300|Ano6|105722|anoctamin 6
mm9_v1_chr1_-_175961921_175961984	0.328623	BPTF.p2	M31418|Ifi202b|26388|interferon activated gene 202B	AK036386|Ifi205|226695|interferon activated gene 205
mm9_v1_chr3_+_94247220_94247297	0.327616	BPTF.p2	AK021196|Mrpl9|78523|mitochondrial ribosomal protein L9	AK161563|Mrpl9|78523|mitochondrial ribosomal protein L9	AK040055|Mrpl9|78523|mitochondrial ribosomal protein L9	AK162023|Mrpl9|78523|mitochondrial ribosomal protein L9	NM_030116|Mrpl9|78523|mitochondrial ribosomal protein L9	AK146237|Mrpl9|78523|mitochondrial ribosomal protein L9	AK046099|Mrpl9|78523|mitochondrial ribosomal protein L9	BC116385|Mrpl9|78523|mitochondrial ribosomal protein L9	BC116386|Mrpl9|78523|mitochondrial ribosomal protein L9	AB049637|Mrpl9|78523|mitochondrial ribosomal protein L9
mm9_v1_chr11_-_121090513_121090656	0.32693	BPTF.p2	BC026616|BC017643|217370|cDNA sequence BC017643	AK158402|BC017643|217370|cDNA sequence BC017643	AK170767|BC017643|217370|cDNA sequence BC017643	BC017643|BC017643|217370|cDNA sequence BC017643	NM_144832|BC017643|217370|cDNA sequence BC017643	AK159453|BC017643|217370|cDNA sequence BC017643	AK168104|BC017643|217370|cDNA sequence BC017643	BC027406|BC017643|217370|cDNA sequence BC017643	AK145884|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr5_-_92511942_92511942	0.326534	BPTF.p2	AK149427|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080797|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr5_+_32438843_32438906	0.326492	BPTF.p2	NM_008037|Fosl2|14284|fos-like antigen 2	BC065131|Fosl2|14284|fos-like antigen 2
mm9_v1_chr9_-_79825502_79825688	0.326259	BPTF.p2	AK017709|Filip1|70598|filamin A interacting protein 1	BC125581|Filip1|70598|filamin A interacting protein 1	BC131965|Filip1|70598|filamin A interacting protein 1	NM_001081243|Filip1|70598|filamin A interacting protein 1
mm9_v1_chr6_+_57159851_57159851	0.326124	BPTF.p2	NM_053235|Vmn1r13|113862|vomeronasal 1 receptor 13
mm9_v1_chr17_+_73186891_73186925	0.326104	BPTF.p2	AK154461|Ypel5|383295|yippee-like 5 (Drosophila)
mm9_v1_chr19_-_8893358_8893513	0.325847	BPTF.p2	BC035304|Ttc9c|70387|tetratricopeptide repeat domain 9C	BC063773|Ttc9c|70387|tetratricopeptide repeat domain 9C
mm9_v1_chrX_+_50251737_50251764	0.325664	BPTF.p2	AF283559|Rps2|16898|ribosomal protein S2
mm9_v1_chr2_+_80457201_80457422	0.325521	BPTF.p2	AF237618|Dusp19|68082|dual specificity phosphatase 19	NM_024438|Dusp19|68082|dual specificity phosphatase 19	AK010127|Dusp19|68082|dual specificity phosphatase 19	AK077871|Dusp19|68082|dual specificity phosphatase 19	AK170170|Dusp19|68082|dual specificity phosphatase 19	AK018369|Dusp19|68082|dual specificity phosphatase 19	AB051896|Dusp19|68082|dual specificity phosphatase 19	AK049927|Dusp19|68082|dual specificity phosphatase 19	AB038769|Dusp19|68082|dual specificity phosphatase 19	BC021591|Dusp19|68082|dual specificity phosphatase 19	AK083610|Dusp19|68082|dual specificity phosphatase 19
mm9_v1_chr9_-_78435825_78435857	0.324847	BPTF.p2	AK029102|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	AK087395|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	NM_172773|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5
mm9_v1_chr17_+_29839370_29839515	0.324803	BPTF.p2	
mm9_v1_chr5_+_107393340_107393415	0.324772	BPTF.p2	AB018574|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	AB018575|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	NM_009863|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	AK012986|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	AK163921|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	AJ007661|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	BC072666|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	BC080702|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	BC062149|Cdc7|12545|cell division cycle 7 (S. cerevisiae)	AK145921|Cdc7|12545|cell division cycle 7 (S. cerevisiae)
mm9_v1_chr4_+_11413062_11413204	0.324636	BPTF.p2	AK170075|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK155623|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	NM_001081183|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK076731|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK162531|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	BC033309|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK052499|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK034232|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene	AK122509|1110037F02Rik|66185|RIKEN cDNA 1110037F02 gene
mm9_v1_chr4_+_40669908_40669973	0.324409	BPTF.p2	NM_001164671|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1	NM_001164672|Dnaja1|15502|DnaJ (Hsp40) homolog, subfamily A, member 1
mm9_v1_chr17_-_89599951_89600014	0.323715	BPTF.p2	AF095642|Fshr|14309|follicle stimulating hormone receptor	BC137990|Fshr|14309|follicle stimulating hormone receptor	BC137991|Fshr|14309|follicle stimulating hormone receptor	AK016635|Fshr|14309|follicle stimulating hormone receptor	NM_013523|Fshr|14309|follicle stimulating hormone receptor
mm9_v1_chr6_-_49214015_49214054	0.323643	BPTF.p2	AK170599|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076230|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK089980|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK171708|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK005187|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	NM_198102|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK148552|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chrX_-_133278223_133278228	0.322924	BPTF.p2	AK161610|Morf4l2|56397|mortality factor 4 like 2	AK166637|Morf4l2|56397|mortality factor 4 like 2	NM_001168228|Morf4l2|56397|mortality factor 4 like 2	NM_001168230|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chrX_+_130385546_130385673	0.322333	BPTF.p2	BC049944|Tnmd|64103|tenomodulin	NM_022322|Tnmd|64103|tenomodulin	AF191768|Tnmd|64103|tenomodulin	AK003748|Tnmd|64103|tenomodulin	AF219993|Tnmd|64103|tenomodulin
mm9_v1_chr2_+_154262114_154262265	0.322228	BPTF.p2	AK148027|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_009823|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_172860|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK040403|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	DQ213025|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC064679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK049206|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr2_+_74517614_74517665	0.321816	BPTF.p2	AK054090|Hoxd11|15431|homeobox D11
mm9_v1_chr6_+_127022919_127023047	0.321769	BPTF.p2	AK155687|Fgf23|64654|fibroblast growth factor 23	NM_022657|Fgf23|64654|fibroblast growth factor 23	AF263536|Fgf23|64654|fibroblast growth factor 23	BC120605|Fgf23|64654|fibroblast growth factor 23	AB037889|Fgf23|64654|fibroblast growth factor 23
mm9_v1_chr17_+_25910720_25910771	0.321758	BPTF.p2	AK145408|Narfl|67563|nuclear prelamin A recognition factor-like	NM_026238|Narfl|67563|nuclear prelamin A recognition factor-like	AK014038|Narfl|67563|nuclear prelamin A recognition factor-like	AK043694|Narfl|67563|nuclear prelamin A recognition factor-like	AK018548|Narfl|67563|nuclear prelamin A recognition factor-like	BC052830|Narfl|67563|nuclear prelamin A recognition factor-like	BC020468|Narfl|67563|nuclear prelamin A recognition factor-like	BC025108|Narfl|67563|nuclear prelamin A recognition factor-like
mm9_v1_chr11_+_94981430_94981448	0.320881	BPTF.p2	NM_010055|Dlx3|13393|distal-less homeobox 3	BC058852|Dlx3|13393|distal-less homeobox 3
mm9_v1_chr6_+_24683244_24683306	0.320194	BPTF.p2	AK016575|Hyal6|74409|hyaluronoglucosaminidase 6	AK030190|Hyal6|74409|hyaluronoglucosaminidase 6	NM_028920|Hyal6|74409|hyaluronoglucosaminidase 6	AK029715|Hyal6|74409|hyaluronoglucosaminidase 6	BC151178|Hyal6|74409|hyaluronoglucosaminidase 6	BC151179|Hyal6|74409|hyaluronoglucosaminidase 6
mm9_v1_chr18_+_37480034_37480222	0.32007	BPTF.p2	AK028661|Pcdhb5|93876|protocadherin beta 5	NM_053130|Pcdhb5|93876|protocadherin beta 5	AK049825|Pcdhb5|93876|protocadherin beta 5	BC141147|Pcdhb5|93876|protocadherin beta 5	AY013787|Pcdhb5|93876|protocadherin beta 5
mm9_v1_chr18_+_54113094_54113152	0.31948	BPTF.p2	AJ279839|Csnk1g3|70425|casein kinase 1, gamma 3
mm9_v1_chr8_+_108674263_108674491	0.319187	BPTF.p2	AK028614|Pla2g15|192654|phospholipase A2, group XV	BC019373|Pla2g15|192654|phospholipase A2, group XV	NM_133792|Pla2g15|192654|phospholipase A2, group XV	AK155004|Pla2g15|192654|phospholipase A2, group XV	AK085194|Pla2g15|192654|phospholipase A2, group XV	AK163111|Pla2g15|192654|phospholipase A2, group XV	AK170814|Pla2g15|192654|phospholipase A2, group XV	AF468958|Pla2g15|192654|phospholipase A2, group XV	AK180645|Pla2g15|192654|phospholipase A2, group XV	AK188333|Pla2g15|192654|phospholipase A2, group XV	AK205252|Pla2g15|192654|phospholipase A2, group XV	AK205480|Pla2g15|192654|phospholipase A2, group XV	AK207442|Pla2g15|192654|phospholipase A2, group XV	AK211077|Pla2g15|192654|phospholipase A2, group XV	AK212406|Pla2g15|192654|phospholipase A2, group XV	AK212507|Pla2g15|192654|phospholipase A2, group XV	AK212587|Pla2g15|192654|phospholipase A2, group XV	AK212623|Pla2g15|192654|phospholipase A2, group XV	AK215050|Pla2g15|192654|phospholipase A2, group XV	AK215274|Pla2g15|192654|phospholipase A2, group XV	AK217196|Pla2g15|192654|phospholipase A2, group XV	AK219754|Pla2g15|192654|phospholipase A2, group XV
mm9_v1_chr2_-_181598918_181598962	0.319044	BPTF.p2	AK013066|2810410D24Rik|69254|RIKEN cDNA 2810410D24 gene
mm9_v1_chr10_+_82448326_82448493	0.31881	BPTF.p2	BC137629|Chst11|58250|carbohydrate sulfotransferase 11	BC144793|Chst11|58250|carbohydrate sulfotransferase 11
mm9_v1_chr9_+_99370839_99370876	0.318568	BPTF.p2	BC068205|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene	AK005560|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene
mm9_v1_chr5_-_125914417_125914513	0.318394	BPTF.p2	BC066077|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37	NM_203319|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37	BC080298|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37	AK148257|Dhx37|208144|DEAH (Asp-Glu-Ala-His) box polypeptide 37
mm9_v1_chr16_-_20610796_20610837	0.31836	BPTF.p2	BC031893|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK090067|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK149510|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	NM_145939|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)
mm9_v1_chr10_-_12912880_12912990	0.318293	BPTF.p2	AK011491|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC069962|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC067062|Ltv1|353258|LTV1 homolog (S. cerevisiae)	NM_181470|Ltv1|353258|LTV1 homolog (S. cerevisiae)
mm9_v1_chr11_-_68685356_68685412	0.318193	BPTF.p2	BC021434|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr2_-_80287552_80287621	0.317988	BPTF.p2	AK029941|Frzb|20378|frizzled-related protein	NM_011356|Frzb|20378|frizzled-related protein
mm9_v1_chr15_+_102839909_102840036	0.317833	BPTF.p2	X16511|Hoxc6|15425|homeobox C6	BC028482|Hoxc6|15425|homeobox C6	NM_010465|Hoxc6|15425|homeobox C6	BC141061|Hoxc6|15425|homeobox C6	AB221685|Hoxc6|15425|homeobox C6
mm9_v1_chr7_-_20262106_20262119	0.317723	BPTF.p2	AK146468|Apoc2|11813|apolipoprotein C-II	Z15090|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr3_+_123058707_123058740	0.316773	BPTF.p2	AK009425|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr6_+_51473868_51474033	0.316474	BPTF.p2	AK150704|Snx10|71982|sorting nexin 10	AK150999|Snx10|71982|sorting nexin 10	AK151320|Snx10|71982|sorting nexin 10	AK151520|Snx10|71982|sorting nexin 10	AK153127|Snx10|71982|sorting nexin 10	NM_001127349|Snx10|71982|sorting nexin 10	AK152949|Snx10|71982|sorting nexin 10	AK152825|Snx10|71982|sorting nexin 10	AK153356|Snx10|71982|sorting nexin 10	AK010399|Snx10|71982|sorting nexin 10	AK169110|Snx10|71982|sorting nexin 10	BC010334|Snx10|71982|sorting nexin 10	AK042505|Snx10|71982|sorting nexin 10	AK150878|Snx10|71982|sorting nexin 10
mm9_v1_chr11_-_79067893_79067979	0.316	BPTF.p2	AF033186|Wsb1|78889|WD repeat and SOCS box-containing 1	BC053391|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr14_+_118666284_118666379	0.315729	BPTF.p2	NM_001101609|Gm9376|668814|predicted gene 9376
mm9_v1_chr14_-_21475715_21475724	0.315403	BPTF.p2	AK041896|Myoz1|59011|myozenin 1	AK009077|Myoz1|59011|myozenin 1
mm9_v1_chr4_-_94595442_94595518	0.315089	BPTF.p2	AB438105|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AB438106|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK006446|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	DQ336137|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK016313|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	BC089517|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	NM_027089|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	AK016738|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	EU828781|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene	EU828782|4930579C15Rik|67753|RIKEN cDNA 4930579C15 gene
mm9_v1_chr9_-_54041231_54041328	0.314741	BPTF.p2	BC103670|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	BC104489|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	D00659|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	NM_007810|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	AK143323|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1
mm9_v1_chr12_+_73542852_73542935	0.314381	BPTF.p2	AK029802|Lrrc9|78257|leucine rich repeat containing 9	NM_001142728|Lrrc9|78257|leucine rich repeat containing 9	NM_030070|Lrrc9|78257|leucine rich repeat containing 9	AK019545|Lrrc9|78257|leucine rich repeat containing 9	AK015292|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr1_+_136007818_136007852	0.314218	BPTF.p2	AK009012|Chit1|71884|chitinase 1 (chitotriosidase)	AY458654|Chit1|71884|chitinase 1 (chitotriosidase)	NM_027979|Chit1|71884|chitinase 1 (chitotriosidase)	BC138765|Chit1|71884|chitinase 1 (chitotriosidase)
mm9_v1_chr17_+_27993426_27993458	0.31388	BPTF.p2	AK089790|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK144200|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	AK220293|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1	NM_001080769|Uhrf1bp1|224648|UHRF1 (ICBP90) binding protein 1
mm9_v1_chr16_-_11909420_11909546	0.313837	BPTF.p2	BC025476|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029379|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK032288|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK041329|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	BC034347|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK133977|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK080876|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK049721|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK134718|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	NM_146067|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029442|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1
mm9_v1_chr8_+_109459623_109459679	0.313611	BPTF.p2	AK131687|Sntb2|20650|syntrophin, basic 2	AK040423|Sntb2|20650|syntrophin, basic 2	AK165009|Sntb2|20650|syntrophin, basic 2	NM_009229|Sntb2|20650|syntrophin, basic 2	BC138850|Sntb2|20650|syntrophin, basic 2	BC145442|Sntb2|20650|syntrophin, basic 2	U00678|Sntb2|20650|syntrophin, basic 2	AK080059|Sntb2|20650|syntrophin, basic 2	AK165900|Sntb2|20650|syntrophin, basic 2
mm9_v1_chr6_-_83720525_83720778	0.313491	BPTF.p2	AK170049|Tex261|21766|testis expressed gene 261	X80425|Tex261|21766|testis expressed gene 261	AK214743|Tex261|21766|testis expressed gene 261
mm9_v1_chr3_+_96449506_96449522	0.313473	BPTF.p2	NM_001081053|Itga10|213119|integrin, alpha 10	BC115770|Itga10|213119|integrin, alpha 10
mm9_v1_chr2_+_153988342_153988366	0.313344	BPTF.p2	AK009835|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010012|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010159|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	NM_025990|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009441|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009629|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009803|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010145|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009329|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009531|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009562|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009580|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009695|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010051|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010158|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010115|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	BC115526|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	BC115527|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene
mm9_v1_chr15_+_54242324_54242328	0.313083	BPTF.p2	AB016429|Colec10|239447|collectin sub-family member 10	AK028423|Colec10|239447|collectin sub-family member 10	BC106836|Colec10|239447|collectin sub-family member 10	BC106837|Colec10|239447|collectin sub-family member 10	BC108945|Colec10|239447|collectin sub-family member 10	NM_173422|Colec10|239447|collectin sub-family member 10
mm9_v1_chr6_+_38501333_38501546	0.312934	BPTF.p2	AK046307|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK044839|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170848|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170849|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_138680|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK155264|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056383|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056354|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056970|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK166155|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK147889|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AF318301|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK038543|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK048581|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK053863|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK134191|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr16_-_88874510_88874513	0.312786	BPTF.p2	BC115787|Krtap16-1|170651|keratin associated protein 16-1	AF345291|Krtap16-1|170651|keratin associated protein 16-1	BC115815|Krtap16-1|170651|keratin associated protein 16-1	NM_130870|Krtap16-1|170651|keratin associated protein 16-1
mm9_v1_chr19_-_3686441_3686567	0.31268	BPTF.p2	AF077847|Lrp5|16973|low density lipoprotein receptor-related protein 5	AK220186|Lrp5|16973|low density lipoprotein receptor-related protein 5	BC011374|Lrp5|16973|low density lipoprotein receptor-related protein 5	BC094610|Lrp5|16973|low density lipoprotein receptor-related protein 5	AF064984|Lrp5|16973|low density lipoprotein receptor-related protein 5	AK147068|Lrp5|16973|low density lipoprotein receptor-related protein 5	AK147231|Lrp5|16973|low density lipoprotein receptor-related protein 5	AK147330|Lrp5|16973|low density lipoprotein receptor-related protein 5	AK081025|Lrp5|16973|low density lipoprotein receptor-related protein 5	NM_008513|Lrp5|16973|low density lipoprotein receptor-related protein 5
mm9_v1_chr3_+_90318894_90318921	0.312207	BPTF.p2	X99921|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr6_-_146582942_146583021	0.311491	BPTF.p2	AK204708|Tm7sf3|67623|transmembrane 7 superfamily member 3	AK010720|Tm7sf3|67623|transmembrane 7 superfamily member 3	BC049960|Tm7sf3|67623|transmembrane 7 superfamily member 3
mm9_v1_chr11_+_57917469_57917691	0.31049	BPTF.p2	AK150757|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AK153907|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	BC004040|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	NM_026949|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AK075727|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AY515608|Cnot8|69125|CCR4-NOT transcription complex, subunit 8
mm9_v1_chr5_+_37259906_37259968	0.309313	BPTF.p2	AK032023|Ppp2r2c|269643|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform	AK049830|Ppp2r2c|269643|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform
mm9_v1_chr6_-_66987377_66987402	0.309088	BPTF.p2	BC011141|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	AK144900|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	L28177|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	NM_007836|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha
mm9_v1_chr11_-_69495203_69495445	0.30899	BPTF.p2	AY008764|Senp3|80886|SUMO/sentrin specific peptidase 3	BC037014|Senp3|80886|SUMO/sentrin specific peptidase 3	AK045071|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr2_+_180444945_180445046	0.308793	BPTF.p2	AK009106|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene	BC052539|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene
mm9_v1_chr7_-_26082941_26082973	0.308742	BPTF.p2	AK167496|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	BC067015|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	AK039375|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	AK154547|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	NM_008776|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3	U57746|Pafah1b3|18476|platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
mm9_v1_chr18_+_32056465_32056564	0.308668	BPTF.p2	BC003939|Wdr33|74320|WD repeat domain 33
mm9_v1_chr6_-_56654667_56654692	0.308404	BPTF.p2	BC048459|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK008480|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK011218|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC061085|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK009617|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132626|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132628|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_025520|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr5_+_104631633_104631713	0.30826	BPTF.p2	AK132177|Dmp1|13406|dentin matrix protein 1	AK157973|Dmp1|13406|dentin matrix protein 1	NM_016779|Dmp1|13406|dentin matrix protein 1	U65020|Dmp1|13406|dentin matrix protein 1	BC113753|Dmp1|13406|dentin matrix protein 1
mm9_v1_chr13_-_99585403_99585403	0.307959	BPTF.p2	AK031041|Fcho2|218503|FCH domain only 2	NM_172591|Fcho2|218503|FCH domain only 2
mm9_v1_chr15_+_81575472_81575548	0.307895	BPTF.p2	AK165492|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK147978|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK147484|Zc3h7b|20286|zinc finger CCCH type containing 7B	BC059923|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK171949|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr6_-_132314127_132314152	0.307881	BPTF.p2	M11897|Gm4736|114600|predicted gene 4736	X63004|Prpmp5|381832|proline-rich protein MP5	BC171936|Gm8882|667929|predicted gene 8882	BC171935|Gm8882|667929|predicted gene 8882	NM_001177588|Gm8882|667929|predicted gene 8882	NM_053251|Gm4736|114600|predicted gene 4736
mm9_v1_chr17_+_29089357_29089397	0.307837	BPTF.p2	AK168440|Kctd20|66989|potassium channel tetramerisation domain containing 20
mm9_v1_chr4_-_19849637_19849704	0.307603	BPTF.p2	AK089507|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	BC087899|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170578|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170659|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AB088358|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170405|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170072|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK137586|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AY517482|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr13_-_58227306_58227430	0.307371	BPTF.p2	BC048746|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr3_-_95110715_95110725	0.307346	BPTF.p2	BC062140|Anxa9|71790|annexin A9	AK003395|Anxa9|71790|annexin A9	NM_001085383|Anxa9|71790|annexin A9
mm9_v1_chr18_+_37649118_37649272	0.307137	BPTF.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr11_-_60013141_60013246	0.305566	BPTF.p2	AK040663|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr13_+_30228397_30228535	0.304895	BPTF.p2	BC024653|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK020281|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK033388|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK137755|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK146984|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB297382|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB305045|Mboat1|218121|membrane bound O-acyltransferase domain containing 1
mm9_v1_chr10_-_17667872_17667872	0.304689	BPTF.p2	AK132340|Heca|380629|headcase homolog (Drosophila)	NM_001033432|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr1_+_129625987_129626062	0.304332	BPTF.p2	AK143962|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	NM_001033041|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	BC139281|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	AB071419|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase
mm9_v1_chr3_+_31801595_31801757	0.304013	BPTF.p2	AK012400|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2	BC046227|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2	BC058957|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_028231|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm9_v1_chr2_-_80287349_80287399	0.303923	BPTF.p2	U88568|Frzb|20378|frizzled-related protein	BC016884|Frzb|20378|frizzled-related protein
mm9_v1_chr8_-_109620413_109620444	0.303695	BPTF.p2	AK089419|Terf2|21750|telomeric repeat binding factor 2	BC046284|Terf2|21750|telomeric repeat binding factor 2	AK049507|Terf2|21750|telomeric repeat binding factor 2	NM_001083118|Terf2|21750|telomeric repeat binding factor 2	NM_009353|Terf2|21750|telomeric repeat binding factor 2
mm9_v1_chr1_+_94807324_94807438	0.303429	BPTF.p2	AK154881|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1	AK133751|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1
mm9_v1_chr11_+_3102355_3102394	0.303416	BPTF.p2	NM_001166548|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AK041598|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1
mm9_v1_chr11_-_53448203_53448203	0.303371	BPTF.p2	M23504|Il13|16163|interleukin 13	NM_008355|Il13|16163|interleukin 13
mm9_v1_chr3_-_145770980_145771093	0.303328	BPTF.p2	AK029903|Wdr63|242253|WD repeat domain 63	NM_172864|Wdr63|242253|WD repeat domain 63	BC158119|Wdr63|242253|WD repeat domain 63
mm9_v1_chr4_-_133527108_133527157	0.303235	BPTF.p2	AK205621|Dhdds|67422|dehydrodolichyl diphosphate synthase
mm9_v1_chr11_+_96143218_96143218	0.303167	BPTF.p2	NM_010461|Hoxb8|15416|homeobox B8	X13721|Hoxb8|15416|homeobox B8
mm9_v1_chr17_-_26017802_26017802	0.3024	BPTF.p2	NM_001100454|Wfikkn1|215001|WAP, FS, Ig, KU, and NTR-containing protein 1
mm9_v1_chr19_+_22522646_22522721	0.301296	BPTF.p2	AK044454|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_177341|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141400|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	BC141412|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr17_+_34781733_34781827	0.301265	BPTF.p2	AK146018|Fkbpl|56299|FK506 binding protein-like	BC046338|Fkbpl|56299|FK506 binding protein-like	NM_019873|Fkbpl|56299|FK506 binding protein-like
mm9_v1_chr14_-_51363998_51363998	0.300282	BPTF.p2	NM_020288|Olfr749|56858|olfactory receptor 749
mm9_v1_chr15_+_66502314_66502353	0.299637	BPTF.p2	U76389|Tg|21819|thyroglobulin	NM_009375|Tg|21819|thyroglobulin	BC111467|Tg|21819|thyroglobulin	AF076186|Tg|21819|thyroglobulin	AF076187|Tg|21819|thyroglobulin
mm9_v1_chr7_+_14209315_14209343	0.299315	BPTF.p2	NM_001184980|Sult2a5|434264|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 5
mm9_v1_chr10_-_89195016_89195045	0.299154	BPTF.p2	BC062137|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	AK088571|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	AK008409|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)	NM_025914|Actr6|67019|ARP6 actin-related protein 6 homolog (yeast)
mm9_v1_chr6_+_58257261_58257290	0.299141	BPTF.p2	BC150722|Vmn1r29|113859|vomeronasal 1 receptor 29	NM_053232|Vmn1r29|113859|vomeronasal 1 receptor 29
mm9_v1_chr5_+_62200081_62200187	0.298955	BPTF.p2	BC120827|G6pd2|14380|glucose-6-phosphate dehydrogenase 2	BC137684|G6pd2|14380|glucose-6-phosphate dehydrogenase 2	NM_019468|G6pd2|14380|glucose-6-phosphate dehydrogenase 2
mm9_v1_chr4_-_138908210_138908289	0.298881	BPTF.p2	AK011387|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC005734|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	NM_023536|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	AK171445|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC096556|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC138221|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC145205|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC145209|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)
mm9_v1_chr6_-_29114604_29114752	0.298715	BPTF.p2	BC024602|Rbm28|68272|RNA binding motif protein 28	AK156773|Rbm28|68272|RNA binding motif protein 28	BC040811|Rbm28|68272|RNA binding motif protein 28	AK012408|Rbm28|68272|RNA binding motif protein 28	AK019296|Rbm28|68272|RNA binding motif protein 28	AK019436|Rbm28|68272|RNA binding motif protein 28	AK161670|Rbm28|68272|RNA binding motif protein 28	AK013047|Rbm28|68272|RNA binding motif protein 28	AK167050|Rbm28|68272|RNA binding motif protein 28	NM_133925|Rbm28|68272|RNA binding motif protein 28
mm9_v1_chr4_-_73596693_73596749	0.298674	BPTF.p2	BC115483|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	BC115484|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009124|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009097|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027104|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027981|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene
mm9_v1_chr9_-_99776467_99776588	0.298287	BPTF.p2	BC069948|Sox14|20669|SRY-box containing gene 14	AK138208|Sox14|20669|SRY-box containing gene 14	BC055767|Sox14|20669|SRY-box containing gene 14	BC083360|Sox14|20669|SRY-box containing gene 14	BC100555|Sox14|20669|SRY-box containing gene 14	NM_011440|Sox14|20669|SRY-box containing gene 14
mm9_v1_chr2_-_32111045_32111247	0.298001	BPTF.p2	AK208557|Uck1|22245|uridine-cytidine kinase 1	AK218660|Uck1|22245|uridine-cytidine kinase 1
mm9_v1_chr18_+_24148190_24148219	0.297853	BPTF.p2	BC138830|Zfp35|22694|zinc finger protein 35	BC138832|Zfp35|22694|zinc finger protein 35
mm9_v1_chr6_-_69494873_69494938	0.297822	BPTF.p2	J04610|Igkv4-57-1|384514|immunoglobulin kappa variable 4-57-1
mm9_v1_chr11_+_75281563_75281593	0.297685	BPTF.p2	BC021945|Tlcd2|380712|TLC domain containing 2	NM_027249|Tlcd2|380712|TLC domain containing 2	AK008522|Tlcd2|380712|TLC domain containing 2
mm9_v1_chr7_-_21597204_21597204	0.297359	BPTF.p2	NM_001166837|Vmn1r114|100042996|vomeronasal 1 receptor 114
mm9_v1_chr12_-_92622769_92622848	0.296812	BPTF.p2	BC079647|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK054363|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK017333|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK033284|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK054164|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	AK029215|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	BC076614|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene	NM_181815|4930534B04Rik|75216|RIKEN cDNA 4930534B04 gene
mm9_v1_chr7_+_52257572_52257687	0.296802	BPTF.p2	
mm9_v1_chr17_+_28465962_28465972	0.296509	BPTF.p2	AK177057|Rpl10a|19896|ribosomal protein L10A	AK193763|Rpl10a|19896|ribosomal protein L10A	AK200448|Rpl10a|19896|ribosomal protein L10A	AK215262|Rpl10a|19896|ribosomal protein L10A
mm9_v1_chr4_+_128964854_128964874	0.29644	BPTF.p2	AK081983|Sync|68828|syncoilin	NM_023485|Sync|68828|syncoilin	AK160756|Sync|68828|syncoilin
mm9_v1_chr17_+_6079804_6079929	0.296302	BPTF.p2	NM_181392|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	AK084443|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	AK003547|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	AK003579|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	AK011281|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	BC029238|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	AK013225|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	AK019011|Gtf2h5|66467|general transcription factor IIH, polypeptide 5	AK012257|Gtf2h5|66467|general transcription factor IIH, polypeptide 5
mm9_v1_chr12_-_79944026_79944112	0.296087	BPTF.p2	
mm9_v1_chr8_+_74764036_74764120	0.296086	BPTF.p2	BC003823|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1	AK215581|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1
mm9_v1_chrX_-_160696001_160696124	0.295478	BPTF.p2	BC138104|Bmx|12169|BMX non-receptor tyrosine kinase	BC138105|Bmx|12169|BMX non-receptor tyrosine kinase	U88091|Bmx|12169|BMX non-receptor tyrosine kinase	AK080038|Bmx|12169|BMX non-receptor tyrosine kinase	AK040936|Bmx|12169|BMX non-receptor tyrosine kinase	NM_009759|Bmx|12169|BMX non-receptor tyrosine kinase
mm9_v1_chr15_-_102552494_102552522	0.295281	BPTF.p2	AK018734|Calcoco1|67488|calcium binding and coiled coil domain 1	AK007393|Calcoco1|67488|calcium binding and coiled coil domain 1	BC054783|Calcoco1|67488|calcium binding and coiled coil domain 1	AK220400|Calcoco1|67488|calcium binding and coiled coil domain 1	AK035598|Calcoco1|67488|calcium binding and coiled coil domain 1
mm9_v1_chr4_+_49644923_49645030	0.295209	BPTF.p2	NM_001163263|Rnf20|109331|ring finger protein 20	NM_182999|Rnf20|109331|ring finger protein 20	AK053783|Rnf20|109331|ring finger protein 20	AK085436|Rnf20|109331|ring finger protein 20	AK139883|Rnf20|109331|ring finger protein 20	AK048862|Rnf20|109331|ring finger protein 20	AK051278|Rnf20|109331|ring finger protein 20	BC052482|Rnf20|109331|ring finger protein 20	AK087860|Rnf20|109331|ring finger protein 20	AK220492|Rnf20|109331|ring finger protein 20	AK082529|Rnf20|109331|ring finger protein 20
mm9_v1_chr9_+_50924105_50924222	0.294836	BPTF.p2	AB050983|Btg4|56057|B-cell translocation gene 4	AK136149|Btg4|56057|B-cell translocation gene 4	AK136185|Btg4|56057|B-cell translocation gene 4	NM_019493|Btg4|56057|B-cell translocation gene 4	AK136041|Btg4|56057|B-cell translocation gene 4	AK136124|Btg4|56057|B-cell translocation gene 4	AK162122|Btg4|56057|B-cell translocation gene 4	AK163407|Btg4|56057|B-cell translocation gene 4	BC066811|Btg4|56057|B-cell translocation gene 4	AJ005120|Btg4|56057|B-cell translocation gene 4
mm9_v1_chr3_-_98449453_98449456	0.294214	BPTF.p2	BC012715|Hsd3b5|15496|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5	NM_008295|Hsd3b5|15496|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5
mm9_v1_chr17_-_25152174_25152174	0.294017	BPTF.p2	AK147411|Cramp1l|57354|Crm, cramped-like (Drosophila)	AK147449|Cramp1l|57354|Crm, cramped-like (Drosophila)	NM_020608|Cramp1l|57354|Crm, cramped-like (Drosophila)
mm9_v1_chr5_+_108817391_108817466	0.29355	BPTF.p2	NM_008806|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC048247|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC058803|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	AK044364|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	X60133|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	X87952|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	X55968|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC129923|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	BC129924|Pde6b|18587|phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
mm9_v1_chr16_-_62846777_62846879	0.292862	BPTF.p2	AK016794|Arl13b|68146|ADP-ribosylation factor-like 13B	AK020859|Arl13b|68146|ADP-ribosylation factor-like 13B	AK051159|Arl13b|68146|ADP-ribosylation factor-like 13B	AK021270|Arl13b|68146|ADP-ribosylation factor-like 13B	NM_026577|Arl13b|68146|ADP-ribosylation factor-like 13B
mm9_v1_chr14_-_55173133_55173197	0.292322	BPTF.p2	AK079161|Haus4|219072|HAUS augmin-like complex, subunit 4	AK079852|Haus4|219072|HAUS augmin-like complex, subunit 4	BC004644|Haus4|219072|HAUS augmin-like complex, subunit 4	BC011095|Haus4|219072|HAUS augmin-like complex, subunit 4	AK087969|Haus4|219072|HAUS augmin-like complex, subunit 4	NM_145462|Haus4|219072|HAUS augmin-like complex, subunit 4
mm9_v1_chr15_+_58704189_58704251	0.291884	BPTF.p2	NM_026642|Trmt12|68260|tRNA methyltranferase 12 homolog (S. cerevisiae)	AK019481|Trmt12|68260|tRNA methyltranferase 12 homolog (S. cerevisiae)	AK076857|Trmt12|68260|tRNA methyltranferase 12 homolog (S. cerevisiae)	BC052533|Trmt12|68260|tRNA methyltranferase 12 homolog (S. cerevisiae)	BC055850|Trmt12|68260|tRNA methyltranferase 12 homolog (S. cerevisiae)	AK079291|Trmt12|68260|tRNA methyltranferase 12 homolog (S. cerevisiae)	AK031429|Trmt12|68260|tRNA methyltranferase 12 homolog (S. cerevisiae)
mm9_v1_chr7_-_24993103_24993167	0.291765	BPTF.p2	BC005456|Zfp111|56707|zinc finger protein 111	AK135436|Zfp111|56707|zinc finger protein 111	NM_019940|Zfp111|56707|zinc finger protein 111
mm9_v1_chr18_-_64676090_64676141	0.291696	BPTF.p2	BC005473|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr7_+_36182085_36182138	0.291656	BPTF.p2	AK012067|Ccdc123|72140|coiled-coil domain containing 123	NM_028120|Ccdc123|72140|coiled-coil domain containing 123	AK082303|Ccdc123|72140|coiled-coil domain containing 123
mm9_v1_chr18_+_61265225_61265605	0.291613	BPTF.p2	AK146069|Csf1r|12978|colony stimulating factor 1 receptor	NM_001037859|Csf1r|12978|colony stimulating factor 1 receptor	BC066863|Csf1r|12978|colony stimulating factor 1 receptor	BC050024|Csf1r|12978|colony stimulating factor 1 receptor	AK171241|Csf1r|12978|colony stimulating factor 1 receptor	AK156550|Csf1r|12978|colony stimulating factor 1 receptor	AK155565|Csf1r|12978|colony stimulating factor 1 receptor	AK155488|Csf1r|12978|colony stimulating factor 1 receptor	AK079247|Csf1r|12978|colony stimulating factor 1 receptor	AK155576|Csf1r|12978|colony stimulating factor 1 receptor	AK155858|Csf1r|12978|colony stimulating factor 1 receptor	AK154128|Csf1r|12978|colony stimulating factor 1 receptor	AK155640|Csf1r|12978|colony stimulating factor 1 receptor	AK155654|Csf1r|12978|colony stimulating factor 1 receptor	AK171386|Csf1r|12978|colony stimulating factor 1 receptor	AK004947|Csf1r|12978|colony stimulating factor 1 receptor	AK154556|Csf1r|12978|colony stimulating factor 1 receptor	AK154653|Csf1r|12978|colony stimulating factor 1 receptor	AK154699|Csf1r|12978|colony stimulating factor 1 receptor	AK076215|Csf1r|12978|colony stimulating factor 1 receptor	AK143545|Csf1r|12978|colony stimulating factor 1 receptor	X06368|Csf1r|12978|colony stimulating factor 1 receptor	X68932|Csf1r|12978|colony stimulating factor 1 receptor	AK080326|Csf1r|12978|colony stimulating factor 1 receptor	BC043054|Csf1r|12978|colony stimulating factor 1 receptor	AK089498|Csf1r|12978|colony stimulating factor 1 receptor	AK171543|Csf1r|12978|colony stimulating factor 1 receptor	BC036343|Csf1r|12978|colony stimulating factor 1 receptor	AK041299|Csf1r|12978|colony stimulating factor 1 receptor
mm9_v1_chr17_-_47551659_47551659	0.291528	BPTF.p2	AK005579|1700001C19Rik|75462|RIKEN cDNA 1700001C19 gene	NM_001172091|1700001C19Rik|75462|RIKEN cDNA 1700001C19 gene
mm9_v1_chr2_-_173053287_173053316	0.290674	BPTF.p2	AK077382|Pmepa1|65112|prostate transmembrane protein, androgen induced 1
mm9_v1_chr15_-_50721552_50721725	0.290088	BPTF.p2	BC099962|Trps1|83925|trichorhinophalangeal syndrome I (human)	AF346836|Trps1|83925|trichorhinophalangeal syndrome I (human)	NM_032000|Trps1|83925|trichorhinophalangeal syndrome I (human)
mm9_v1_chr5_+_130695613_130695613	0.290054	BPTF.p2	NM_001081394|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene
mm9_v1_chr14_-_51536045_51536047	0.289337	BPTF.p2	AK207563|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr1_-_154749751_154749796	0.289296	BPTF.p2	BC082789|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC086651|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001005507|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001160256|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr8_+_19495096_19495096	0.289035	BPTF.p2	AJ298147|Defb7|246080|defensin beta 7	NM_139220|Defb7|246080|defensin beta 7
mm9_v1_chr17_+_36974084_36974137	0.288962	BPTF.p2	AK171019|Trim26|22670|tripartite motif-containing 26	NM_001025599|Trim26|22670|tripartite motif-containing 26	AK042252|Trim26|22670|tripartite motif-containing 26	BC037110|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr6_-_146596323_146596323	0.28891	BPTF.p2	NM_001178001|Gm6654|626175|predicted pseudogene 6654
mm9_v1_chr7_-_36181628_36181850	0.288839	BPTF.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr3_+_103379203_103379300	0.288312	BPTF.p2	NM_018800|Syt6|54524|synaptotagmin VI	BC050760|Syt6|54524|synaptotagmin VI	AB026803|Syt6|54524|synaptotagmin VI	AB026809|Syt6|54524|synaptotagmin VI	AB026810|Syt6|54524|synaptotagmin VI
mm9_v1_chr7_-_20158687_20158791	0.287406	BPTF.p2	BC028527|Gemin7|69731|gem (nuclear organelle) associated protein 7	AK010303|Gemin7|69731|gem (nuclear organelle) associated protein 7	NM_027189|Gemin7|69731|gem (nuclear organelle) associated protein 7
mm9_v1_chr9_+_121643763_121643808	0.287258	BPTF.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr7_-_7089433_7089465	0.286154	BPTF.p2	AK013056|Zfp773|76373|zinc finger protein 773	AK036639|Zfp773|76373|zinc finger protein 773	BC117497|Zfp773|76373|zinc finger protein 773	AK031040|Zfp773|76373|zinc finger protein 773	NM_029584|Zfp773|76373|zinc finger protein 773
mm9_v1_chr5_+_116010796_116010949	0.285824	BPTF.p2	BC030189|Rplp0|11837|ribosomal protein, large, P0	AK193996|Rplp0|11837|ribosomal protein, large, P0	AK205179|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr1_+_40637047_40637153	0.285605	BPTF.p2	AK085681|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	AK135750|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	AK141534|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	NM_177084|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	BC120543|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4
mm9_v1_chr6_+_114347929_114347929	0.284958	BPTF.p2	AK046607|Hrh1|15465|histamine receptor H1	NM_008285|Hrh1|15465|histamine receptor H1
mm9_v1_chr12_-_40763924_40763965	0.284764	BPTF.p2	BC029234|Arl4a|11861|ADP-ribosylation factor-like 4A	BC003725|Arl4a|11861|ADP-ribosylation factor-like 4A	AK168618|Arl4a|11861|ADP-ribosylation factor-like 4A	AK048606|Arl4a|11861|ADP-ribosylation factor-like 4A	AK137751|Arl4a|11861|ADP-ribosylation factor-like 4A	NM_007487|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr9_-_40153864_40153891	0.284295	BPTF.p2	BC070451|Gramd1b|235283|GRAM domain containing 1B
mm9_v1_chr10_+_90292388_90292441	0.28415	BPTF.p2	AK032061|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr7_-_127288785_127288804	0.283344	BPTF.p2	BC071183|Zp2|22787|zona pellucida glycoprotein 2	AK135903|Zp2|22787|zona pellucida glycoprotein 2	M34148|Zp2|22787|zona pellucida glycoprotein 2	NM_011775|Zp2|22787|zona pellucida glycoprotein 2	AK138699|Zp2|22787|zona pellucida glycoprotein 2
mm9_v1_chr4_-_74924159_74924210	0.283268	BPTF.p2	AK003640|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene	BC022621|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene	NM_025849|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene	AK013937|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene
mm9_v1_chr6_-_72548335_72548408	0.283211	BPTF.p2	AK049155|Elmod3|232089|ELMO/CED-12 domain containing 3	NM_144917|Elmod3|232089|ELMO/CED-12 domain containing 3	AK084010|Elmod3|232089|ELMO/CED-12 domain containing 3	AK164974|Elmod3|232089|ELMO/CED-12 domain containing 3
mm9_v1_chr5_-_87174825_87174839	0.283079	BPTF.p2	BC115432|Tmprss11e|243084|transmembrane protease, serine 11e	BC115433|Tmprss11e|243084|transmembrane protease, serine 11e	AK162701|Tmprss11e|243084|transmembrane protease, serine 11e	AK037235|Tmprss11e|243084|transmembrane protease, serine 11e	NM_172880|Tmprss11e|243084|transmembrane protease, serine 11e	AY787860|Tmprss11e|243084|transmembrane protease, serine 11e
mm9_v1_chr14_+_55502291_55502313	0.283064	BPTF.p2	AK015644|Bcl2l2|12050|BCL2-like 2
mm9_v1_chrX_+_8849905_8850039	0.282582	BPTF.p2	AK007734|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	NM_023500|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	AY534248|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125618|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125620|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr1_-_172815525_172815670	0.282204	BPTF.p2	AK155026|Dusp12|80915|dual specificity phosphatase 12	AF280810|Dusp12|80915|dual specificity phosphatase 12	AF280811|Dusp12|80915|dual specificity phosphatase 12	AK004488|Dusp12|80915|dual specificity phosphatase 12	AK081862|Dusp12|80915|dual specificity phosphatase 12	AF268196|Dusp12|80915|dual specificity phosphatase 12	BC099453|Dusp12|80915|dual specificity phosphatase 12	NM_023173|Dusp12|80915|dual specificity phosphatase 12
mm9_v1_chr2_+_129838084_129838109	0.281958	BPTF.p2	L10385|Tgm3|21818|transglutaminase 3, E polypeptide	BC129890|Tgm3|21818|transglutaminase 3, E polypeptide	BC129891|Tgm3|21818|transglutaminase 3, E polypeptide	NM_009374|Tgm3|21818|transglutaminase 3, E polypeptide
mm9_v1_chr10_-_126778634_126778717	0.281255	BPTF.p2	AF026305|Gli1|14632|GLI-Kruppel family member GLI1	NM_010296|Gli1|14632|GLI-Kruppel family member GLI1	AB025922|Gli1|14632|GLI-Kruppel family member GLI1
mm9_v1_chr4_+_155336386_155336439	0.280932	BPTF.p2	AK004116|Fam132a|67389|family with sequence similarity 132, member A	NM_026125|Fam132a|67389|family with sequence similarity 132, member A	AK007335|Fam132a|67389|family with sequence similarity 132, member A	AK002876|Fam132a|67389|family with sequence similarity 132, member A
mm9_v1_chr17_-_55851857_55851925	0.28082	BPTF.p2	AK045286|Pot1b|72836|protection of telomeres 1B	AK165040|Pot1b|72836|protection of telomeres 1B	AK050727|Pot1b|72836|protection of telomeres 1B	AK013364|Pot1b|72836|protection of telomeres 1B	NM_028370|Pot1b|72836|protection of telomeres 1B
mm9_v1_chr8_-_46380114_46380132	0.280815	BPTF.p2	BC026555|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr14_-_51512929_51512929	0.280628	BPTF.p2	NM_001166651|Klhl33|546611|kelch-like 33 (Drosophila)
mm9_v1_chr1_+_180179405_180179521	0.280459	BPTF.p2	AK213642|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr16_-_56037836_56037920	0.280034	BPTF.p2	BC106131|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK148219|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	BC023147|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK087991|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK005047|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	NM_029092|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK135426|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1	AK166781|Rg9mtd1|52575|RNA (guanine-9-) methyltransferase domain containing 1
mm9_v1_chr15_-_101363197_101363254	0.2795	BPTF.p2	AY028607|Krt84|16680|keratin 84	BC114971|Krt84|16680|keratin 84	NM_008474|Krt84|16680|keratin 84
mm9_v1_chr8_-_126384108_126384108	0.279469	BPTF.p2	BC036300|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene	NM_028536|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene
mm9_v1_chr17_+_35978442_35978442	0.27936	BPTF.p2	NM_001010833|Mdc1|240087|mediator of DNA damage checkpoint 1
mm9_v1_chr6_+_66846377_66846490	0.278916	BPTF.p2	NM_001177556|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177557|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177559|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_001177560|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	NM_025278|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK005561|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	BC040685|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK162342|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK166035|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK159872|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK148765|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK033422|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12
mm9_v1_chr6_+_57087346_57087346	0.278639	BPTF.p2	BC104398|Vmn1r11|113860|vomeronasal 1 receptor 11	BC104399|Vmn1r11|113860|vomeronasal 1 receptor 11	NM_053233|Vmn1r11|113860|vomeronasal 1 receptor 11
mm9_v1_chr19_+_10708722_10708782	0.278112	BPTF.p2	AK005010|Vwce|71768|von Willebrand factor C and EGF domains	NM_027913|Vwce|71768|von Willebrand factor C and EGF domains	BC030181|Vwce|71768|von Willebrand factor C and EGF domains	BC043473|Vwce|71768|von Willebrand factor C and EGF domains
mm9_v1_chr9_+_79914751_79914905	0.277932	BPTF.p2	AK129219|Senp6|215351|SUMO/sentrin specific peptidase 6	BC061480|Senp6|215351|SUMO/sentrin specific peptidase 6	BC052718|Senp6|215351|SUMO/sentrin specific peptidase 6
mm9_v1_chr18_+_60685866_60685974	0.277645	BPTF.p2	AK162552|Dctn4|67665|dynactin 4	AK168484|Dctn4|67665|dynactin 4	AK160813|Dctn4|67665|dynactin 4	AK050896|Dctn4|67665|dynactin 4	AK019382|Dctn4|67665|dynactin 4	BC034725|Dctn4|67665|dynactin 4	NM_026302|Dctn4|67665|dynactin 4	AK141855|Dctn4|67665|dynactin 4	AK003238|Dctn4|67665|dynactin 4	AK089264|Dctn4|67665|dynactin 4	BC006677|Dctn4|67665|dynactin 4	AK177969|Dctn4|67665|dynactin 4	AK197489|Dctn4|67665|dynactin 4
mm9_v1_chr3_+_30501008_30501008	0.276375	BPTF.p2	BC065084|Mynn|80732|myoneurin	NM_030557|Mynn|80732|myoneurin
mm9_v1_chr11_-_51419012_51419040	0.274728	BPTF.p2	AK207379|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr14_-_21475679_21475701	0.274279	BPTF.p2	AY013298|Myoz1|59011|myozenin 1	AJ005620|Myoz1|59011|myozenin 1
mm9_v1_chr3_+_88489708_88489765	0.274135	BPTF.p2	NM_028814|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK170490|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK038617|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	BC006621|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK012969|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK173057|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK083018|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK164337|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene	AK020778|2810403A07Rik|74200|RIKEN cDNA 2810403A07 gene
mm9_v1_chr11_-_94837640_94837640	0.273942	BPTF.p2	AB024920|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)	NM_009161|Sgca|20391|sarcoglycan, alpha (dystrophin-associated glycoprotein)
mm9_v1_chr2_-_155979971_155980032	0.272963	BPTF.p2	AK046526|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr2_+_120967876_120967876	0.272651	BPTF.p2	BC050879|Adal|75894|adenosine deaminase-like	BC052048|Adal|75894|adenosine deaminase-like	NM_029475|Adal|75894|adenosine deaminase-like
mm9_v1_chr6_-_55631256_55631256	0.272128	BPTF.p2	AK144360|Neurod6|11922|neurogenic differentiation 6	NM_009717|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr12_+_79962662_79962770	0.272091	BPTF.p2	AK003094|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha
mm9_v1_chr13_+_14046883_14047111	0.271767	BPTF.p2	AK044785|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK151677|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK153362|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK035259|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK084275|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK085691|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK134868|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK167635|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	NM_178640|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	BC085110|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK041022|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AB116655|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK144880|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
mm9_v1_chr2_-_93662687_93662734	0.27135	BPTF.p2	BC006597|Ext2|14043|exostoses (multiple) 2	U67837|Ext2|14043|exostoses (multiple) 2	U72141|Ext2|14043|exostoses (multiple) 2	AK152265|Ext2|14043|exostoses (multiple) 2	AK152840|Ext2|14043|exostoses (multiple) 2	AK082572|Ext2|14043|exostoses (multiple) 2	AK084772|Ext2|14043|exostoses (multiple) 2	AK164342|Ext2|14043|exostoses (multiple) 2	AK148090|Ext2|14043|exostoses (multiple) 2	AK150155|Ext2|14043|exostoses (multiple) 2	NM_010163|Ext2|14043|exostoses (multiple) 2
mm9_v1_chr2_+_32305976_32305976	0.271144	BPTF.p2	AK029812|Naif1|71254|nuclear apoptosis inducing factor 1	NM_194335|Naif1|71254|nuclear apoptosis inducing factor 1
mm9_v1_chr19_-_59244517_59244518	0.27094	BPTF.p2	BC111818|Vax1|22326|ventral anterior homeobox containing gene 1	BC119455|Vax1|22326|ventral anterior homeobox containing gene 1	AF064554|Vax1|22326|ventral anterior homeobox containing gene 1	NM_009501|Vax1|22326|ventral anterior homeobox containing gene 1
mm9_v1_chr4_+_143436399_143436414	0.270916	BPTF.p2	AK054347|Gm13103|194225|predicted gene 13103	NM_177571|Gm13103|194225|predicted gene 13103	BC096438|Gm13103|194225|predicted gene 13103
mm9_v1_chr13_-_65307023_65307023	0.2709	BPTF.p2	NM_175290|Nlrp4f|97895|NLR family, pyrin domain containing 4F
mm9_v1_chr4_-_116666956_116667029	0.270518	BPTF.p2	AK002844|Urod|22275|uroporphyrinogen decarboxylase	AK007470|Urod|22275|uroporphyrinogen decarboxylase	AK135090|Urod|22275|uroporphyrinogen decarboxylase	BC008109|Urod|22275|uroporphyrinogen decarboxylase	NM_009478|Urod|22275|uroporphyrinogen decarboxylase	AK172426|Urod|22275|uroporphyrinogen decarboxylase
mm9_v1_chr2_+_163646545_163646658	0.270508	BPTF.p2	NM_016873|Wisp2|22403|WNT1 inducible signaling pathway protein 2	AF100778|Wisp2|22403|WNT1 inducible signaling pathway protein 2	AF126063|Wisp2|22403|WNT1 inducible signaling pathway protein 2	BC032877|Wisp2|22403|WNT1 inducible signaling pathway protein 2
mm9_v1_chr8_+_4613144_4613169	0.270417	BPTF.p2	BC003267|Zfp958|233987|zinc finger protein 958	AK037596|Zfp958|233987|zinc finger protein 958	AK037083|Zfp958|233987|zinc finger protein 958	NM_145591|Zfp958|233987|zinc finger protein 958
mm9_v1_chr13_-_93258004_93258035	0.270142	BPTF.p2	AK134948|Zfyve16|218441|zinc finger, FYVE domain containing 16
mm9_v1_chr2_-_181022670_181022690	0.270072	BPTF.p2	BC059066|Gmeb2|229004|glucocorticoid modulatory element binding protein 2	NM_198169|Gmeb2|229004|glucocorticoid modulatory element binding protein 2
mm9_v1_chr17_-_36053309_36053350	0.269865	BPTF.p2	AK088540|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK167067|Mrps18b|66973|mitochondrial ribosomal protein S18B	BC021752|Mrps18b|66973|mitochondrial ribosomal protein S18B	NM_025878|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK010250|Mrps18b|66973|mitochondrial ribosomal protein S18B	AB049954|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK168140|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK002554|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK076033|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK076044|Mrps18b|66973|mitochondrial ribosomal protein S18B	AK166597|Mrps18b|66973|mitochondrial ribosomal protein S18B
mm9_v1_chr4_-_132019760_132019840	0.269593	BPTF.p2	BC068306|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK012903|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK012886|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	NM_026039|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK159696|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)
mm9_v1_chr19_+_34715368_34715406	0.268815	BPTF.p2	AK151125|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK151278|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK150609|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK153532|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK151298|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK089608|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK144230|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK150352|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK151983|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK153184|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK150424|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK151158|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK152112|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK152753|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK157848|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	NM_008331|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK153500|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	AK131669|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	U43084|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1	BC003768|Ifit1|15957|interferon-induced protein with tetratricopeptide repeats 1
mm9_v1_chr14_+_64055230_64055357	0.26831	BPTF.p2	NM_177628|Fam167a|219148|family with sequence similarity 167, member A	BC065085|Fam167a|219148|family with sequence similarity 167, member A	BC094561|Fam167a|219148|family with sequence similarity 167, member A
mm9_v1_chr7_+_5626205_5626228	0.267605	BPTF.p2	AF324867|Vmn1r62|81016|vomeronasal 1 receptor 62	NM_030741|Vmn1r62|81016|vomeronasal 1 receptor 62	BC113757|Vmn1r62|81016|vomeronasal 1 receptor 62
mm9_v1_chr7_-_20724436_20724436	0.267594	BPTF.p2	NM_001167573|Gm10666|100043037|predicted gene 10666	NM_207547|Vmn1r93|404290|vomernasal 1 receptor Vmn1r93
mm9_v1_chr1_-_156573049_156573160	0.267502	BPTF.p2	NM_009782|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit	BC150750|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm9_v1_chr5_-_121835619_121835649	0.267249	BPTF.p2	NM_001163470|Trafd1|231712|TRAF type zinc finger domain containing 1	NM_172275|Trafd1|231712|TRAF type zinc finger domain containing 1
mm9_v1_chr16_-_84735425_84735537	0.266294	BPTF.p2	BC012274|Mrpl39|27393|mitochondrial ribosomal protein L39	NM_017404|Mrpl39|27393|mitochondrial ribosomal protein L39	AF239728|Mrpl39|27393|mitochondrial ribosomal protein L39	AK031942|Mrpl39|27393|mitochondrial ribosomal protein L39	BC016561|Mrpl39|27393|mitochondrial ribosomal protein L39	BC036276|Mrpl39|27393|mitochondrial ribosomal protein L39	AK007681|Mrpl39|27393|mitochondrial ribosomal protein L39
mm9_v1_chr3_-_93480189_93480204	0.266127	BPTF.p2	AF290198|Tdpoz1|207213|TD and POZ domain containing 1	NM_148949|Tdpoz1|207213|TD and POZ domain containing 1
mm9_v1_chr16_+_84835573_84835671	0.266123	BPTF.p2	AK148087|Gabpa|14390|GA repeat binding protein, alpha	AK145838|Gabpa|14390|GA repeat binding protein, alpha
mm9_v1_chr6_-_123368078_123368078	0.265361	BPTF.p2	NM_001104634|Vmn2r20|667180|vomeronasal 2, receptor 20
mm9_v1_chr1_+_100028032_100028043	0.265263	BPTF.p2	AK007349|1810006J02Rik|69030|RIKEN cDNA 1810006J02 gene
mm9_v1_chr7_+_31278675_31278685	0.265155	BPTF.p2	AK011039|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK050141|Prodh2|56189|proline dehydrogenase (oxidase) 2	NM_019546|Prodh2|56189|proline dehydrogenase (oxidase) 2	U80019|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK011020|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr11_-_100711785_100712037	0.26504	BPTF.p2	Z48539|Stat5b|20851|signal transducer and activator of transcription 5B	BC024319|Stat5b|20851|signal transducer and activator of transcription 5B	AK154664|Stat5b|20851|signal transducer and activator of transcription 5B	AK150098|Stat5b|20851|signal transducer and activator of transcription 5B	NM_001113563|Stat5b|20851|signal transducer and activator of transcription 5B	AK045531|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr17_-_74299469_74299535	0.265006	BPTF.p2	X62932|Xdh|22436|xanthine dehydrogenase	AK164764|Xdh|22436|xanthine dehydrogenase	AK034256|Xdh|22436|xanthine dehydrogenase	AK143412|Xdh|22436|xanthine dehydrogenase	AK161529|Xdh|22436|xanthine dehydrogenase	AK144700|Xdh|22436|xanthine dehydrogenase	BC141183|Xdh|22436|xanthine dehydrogenase	NM_011723|Xdh|22436|xanthine dehydrogenase	AK160010|Xdh|22436|xanthine dehydrogenase
mm9_v1_chr14_-_60845511_60845640	0.264973	BPTF.p2	AK145818|BC010981|407830|cDNA sequence BC010981
mm9_v1_chr17_-_31649139_31649255	0.264396	BPTF.p2	AK213574|Wdr4|57773|WD repeat domain 4	AK164160|Wdr4|57773|WD repeat domain 4	AJ271892|Wdr4|57773|WD repeat domain 4	AJ271893|Wdr4|57773|WD repeat domain 4	AK035125|Wdr4|57773|WD repeat domain 4	BC039272|Wdr4|57773|WD repeat domain 4	AK152271|Wdr4|57773|WD repeat domain 4	AK153161|Wdr4|57773|WD repeat domain 4	AK144821|Wdr4|57773|WD repeat domain 4
mm9_v1_chr10_-_24647243_24647289	0.263638	BPTF.p2	BC013341|Arg1|11846|arginase, liver	AK149471|Arg1|11846|arginase, liver	NM_007482|Arg1|11846|arginase, liver	BC050005|Arg1|11846|arginase, liver
mm9_v1_chr3_-_33980178_33980268	0.263055	BPTF.p2	BC024335|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	BC020327|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK008267|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK010204|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK012051|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK076602|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK007866|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	NM_001026211|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	NM_026332|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19
mm9_v1_chr9_-_44613544_44613680	0.26289	BPTF.p2	
mm9_v1_chr14_-_58364879_58364959	0.26275	BPTF.p2	AK164789|Lats2|50523|large tumor suppressor 2	BC053028|Lats2|50523|large tumor suppressor 2	AK029966|Lats2|50523|large tumor suppressor 2	AK029242|Lats2|50523|large tumor suppressor 2	AK029870|Lats2|50523|large tumor suppressor 2	AK163607|Lats2|50523|large tumor suppressor 2	BC024819|Lats2|50523|large tumor suppressor 2	AK081190|Lats2|50523|large tumor suppressor 2	NM_015771|Lats2|50523|large tumor suppressor 2
mm9_v1_chr2_-_160934743_160934810	0.26256	BPTF.p2	BC145629|Chd6|71389|chromodomain helicase DNA binding protein 6	BC150806|Chd6|71389|chromodomain helicase DNA binding protein 6	AK018129|Chd6|71389|chromodomain helicase DNA binding protein 6	AK040495|Chd6|71389|chromodomain helicase DNA binding protein 6	AK142177|Chd6|71389|chromodomain helicase DNA binding protein 6	AK086807|Chd6|71389|chromodomain helicase DNA binding protein 6	AK162083|Chd6|71389|chromodomain helicase DNA binding protein 6	NM_173368|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080892|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080927|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr11_-_87217940_87218007	0.262467	BPTF.p2	BC090648|Rad51c|114714|RAD51 homolog c (S. cerevisiae)	BC141034|Rad51c|114714|RAD51 homolog c (S. cerevisiae)	NM_053269|Rad51c|114714|RAD51 homolog c (S. cerevisiae)	AK136204|Rad51c|114714|RAD51 homolog c (S. cerevisiae)
mm9_v1_chr2_+_132673469_132673469	0.26167	BPTF.p2	AK016165|Crls1|66586|cardiolipin synthase 1	NM_025646|Crls1|66586|cardiolipin synthase 1
mm9_v1_chr2_-_93709259_93709259	0.261053	BPTF.p2	AK135828|Accsl|381411|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001033452|Accsl|381411|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
mm9_v1_chr9_-_96371668_96371747	0.260258	BPTF.p2	AK208401|Rnf7|19823|ring finger protein 7
mm9_v1_chr7_-_16225125_16225125	0.259871	BPTF.p2	AK139750|Obox3|246791|oocyte specific homeobox 3	NM_145707|Obox3|246791|oocyte specific homeobox 3
mm9_v1_chr19_-_37281762_37281782	0.259634	BPTF.p2	BC128377|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	AY313774|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	NM_198300|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3
mm9_v1_chr4_-_106164724_106164887	0.259155	BPTF.p2	AY373833|Bsnd|140475|Bartter syndrome, infantile, with sensorineural deafness (Barttin)	AF391088|Bsnd|140475|Bartter syndrome, infantile, with sensorineural deafness (Barttin)	AK052587|Bsnd|140475|Bartter syndrome, infantile, with sensorineural deafness (Barttin)	NM_080458|Bsnd|140475|Bartter syndrome, infantile, with sensorineural deafness (Barttin)	BC038287|Bsnd|140475|Bartter syndrome, infantile, with sensorineural deafness (Barttin)
mm9_v1_chr13_-_101262544_101262571	0.258693	BPTF.p2	NM_022011|Gtf2h2|23894|general transcription factor II H, polypeptide 2
mm9_v1_chr19_+_8810274_8810348	0.258355	BPTF.p2	AK145704|Wdr74|107071|WD repeat domain 74	AK077521|Wdr74|107071|WD repeat domain 74	BC019968|Wdr74|107071|WD repeat domain 74	NM_134139|Wdr74|107071|WD repeat domain 74
mm9_v1_chr5_+_121364826_121364874	0.258314	BPTF.p2	NM_133893|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AK054465|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AK136001|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AY055829|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AB067532|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	BC052835|Oas1d|100535|2'-5' oligoadenylate synthetase 1D
mm9_v1_chr13_+_23625779_23625779	0.258075	BPTF.p2	BC125011|Hist1h2af|319173|histone cluster 1, H2af	NM_175661|Hist1h2af|319173|histone cluster 1, H2af
mm9_v1_chr8_+_74764023_74764030	0.258067	BPTF.p2	M62419|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1	NM_007456|Ap1m1|11767|adaptor-related protein complex AP-1, mu subunit 1
mm9_v1_chr9_+_21172314_21172446	0.257921	BPTF.p2	AK150276|Ilf3|16201|interleukin enhancer binding factor 3	AK128936|Ilf3|16201|interleukin enhancer binding factor 3	AK048096|Ilf3|16201|interleukin enhancer binding factor 3	AK077560|Ilf3|16201|interleukin enhancer binding factor 3	BC047272|Ilf3|16201|interleukin enhancer binding factor 3	AF497751|Ilf3|16201|interleukin enhancer binding factor 3	AF497752|Ilf3|16201|interleukin enhancer binding factor 3	DQ104405|Ilf3|16201|interleukin enhancer binding factor 3	DQ104406|Ilf3|16201|interleukin enhancer binding factor 3	NM_001042707|Ilf3|16201|interleukin enhancer binding factor 3	NM_001042708|Ilf3|16201|interleukin enhancer binding factor 3	NM_001042709|Ilf3|16201|interleukin enhancer binding factor 3	NM_010561|Ilf3|16201|interleukin enhancer binding factor 3
mm9_v1_chr9_-_35651734_35651734	0.257879	BPTF.p2	AK020329|9230110F15Rik|77080|RIKEN cDNA 9230110F15 gene	NM_029863|9230110F15Rik|77080|RIKEN cDNA 9230110F15 gene
mm9_v1_chr11_-_88816679_88816773	0.257477	BPTF.p2	AK050181|Scpep1|74617|serine carboxypeptidase 1	AK153485|Scpep1|74617|serine carboxypeptidase 1	BC021399|Scpep1|74617|serine carboxypeptidase 1	AF330052|Scpep1|74617|serine carboxypeptidase 1	AK153225|Scpep1|74617|serine carboxypeptidase 1	BC004847|Scpep1|74617|serine carboxypeptidase 1	AK014680|Scpep1|74617|serine carboxypeptidase 1	NM_029023|Scpep1|74617|serine carboxypeptidase 1
mm9_v1_chr13_-_27530465_27530556	0.257425	BPTF.p2	AF090140|Prl8a6|19112|prolactin family 8, subfamily a, member 6	NM_011167|Prl8a6|19112|prolactin family 8, subfamily a, member 6	BC099469|Prl8a6|19112|prolactin family 8, subfamily a, member 6	AK005435|Prl8a6|19112|prolactin family 8, subfamily a, member 6	AK005478|Prl8a6|19112|prolactin family 8, subfamily a, member 6
mm9_v1_chr7_-_134335965_134336058	0.256667	BPTF.p2	AK005198|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2
mm9_v1_chr5_+_32535080_32535120	0.255699	BPTF.p2	AK030142|Plb1|665270|phospholipase B1	NM_030072|Plb1|665270|phospholipase B1	AK015301|Plb1|665270|phospholipase B1	AK019494|Plb1|665270|phospholipase B1	AK015993|Plb1|665270|phospholipase B1
mm9_v1_chr2_+_30271577_30271577	0.255594	BPTF.p2	AK150029|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr12_-_102321835_102321908	0.25549	BPTF.p2	AK051239|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK031629|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK156272|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK152480|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr1_-_157820378_157820386	0.255433	BPTF.p2	AK044664|Cep350|74081|centrosomal protein 350	NM_001039184|Cep350|74081|centrosomal protein 350
mm9_v1_chr3_+_88420105_88420182	0.255296	BPTF.p2	NM_001198911|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK144972|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr13_-_101086551_101086570	0.255212	BPTF.p2	BC116347|Naip6|17952|NLR family, apoptosis inhibitory protein 6	BC141346|Naip6|17952|NLR family, apoptosis inhibitory protein 6	AF381772|Naip6|17952|NLR family, apoptosis inhibitory protein 6	NM_010871|Naip6|17952|NLR family, apoptosis inhibitory protein 6
mm9_v1_chr10_+_100055019_100055050	0.255059	BPTF.p2	NM_001081246|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK014917|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene	AK006074|1700017N19Rik|66605|RIKEN cDNA 1700017N19 gene
mm9_v1_chr3_-_58689068_58689133	0.254836	BPTF.p2	AK041623|Clrn1|229320|clarin 1	AK042523|Clrn1|229320|clarin 1	BC132254|Clrn1|229320|clarin 1	BC132256|Clrn1|229320|clarin 1	BC145202|Clrn1|229320|clarin 1	AF495718|Clrn1|229320|clarin 1	AF495719|Clrn1|229320|clarin 1	AF495720|Clrn1|229320|clarin 1	NM_153384|Clrn1|229320|clarin 1	NM_153385|Clrn1|229320|clarin 1	NM_153386|Clrn1|229320|clarin 1
mm9_v1_chr6_-_128738499_128738658	0.254419	BPTF.p2	DQ237929|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	X64720|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	S43141|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	AF354263|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	M77678|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	BC061168|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	AK079743|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	NM_001159904|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	NM_008527|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C
mm9_v1_chr14_+_70167372_70167466	0.253357	BPTF.p2	AF176833|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr9_+_48863746_48863781	0.252625	BPTF.p2	AK167937|Zw10|26951|ZW10 homolog (Drosophila), centromere/kinetochore protein
mm9_v1_chrX_-_20527674_20527737	0.252258	BPTF.p2	BC054474|Elk1|13712|ELK1, member of ETS oncogene family	AK132354|Elk1|13712|ELK1, member of ETS oncogene family	NM_007922|Elk1|13712|ELK1, member of ETS oncogene family	AK082260|Elk1|13712|ELK1, member of ETS oncogene family
mm9_v1_chr11_+_6375032_6375069	0.25217	BPTF.p2	
mm9_v1_chr17_+_12777054_12777126	0.252118	BPTF.p2	AJ006036|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	NM_013667|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK143892|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK052658|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC069911|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC015250|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2
mm9_v1_chr4_+_110070336_110070438	0.251973	BPTF.p2	AK016502|Agbl4|78933|ATP/GTP binding protein-like 4	AK019817|Agbl4|78933|ATP/GTP binding protein-like 4	AK051109|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867039|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867040|Agbl4|78933|ATP/GTP binding protein-like 4	NM_001048189|Agbl4|78933|ATP/GTP binding protein-like 4	NM_030231|Agbl4|78933|ATP/GTP binding protein-like 4
mm9_v1_chr1_+_58768329_58768403	0.251667	BPTF.p2	AK009498|Cflar|12633|CASP8 and FADD-like apoptosis regulator	AK152515|Cflar|12633|CASP8 and FADD-like apoptosis regulator	U97076|Cflar|12633|CASP8 and FADD-like apoptosis regulator
mm9_v1_chr6_+_66986592_66986609	0.251149	BPTF.p2	AK029473|E230016M11Rik|320172|RIKEN cDNA E230016M11 gene
mm9_v1_chr17_-_20185168_20185168	0.250898	BPTF.p2	NM_001104566|Vmn2r104|22313|vomeronasal 2, receptor 104
mm9_v1_chr17_+_33661120_33661188	0.250772	BPTF.p2	BC082773|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK042525|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK046333|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK034843|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK034565|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK076334|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	NM_172619|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	BC056427|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	BC100558|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
mm9_v1_chr11_+_6289339_6289394	0.250004	BPTF.p2	NM_028601|Zmiz2|52915|zinc finger, MIZ-type containing 2
mm9_v1_chr5_+_25005506_25005758	0.249839	BPTF.p2	AK149324|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene	AK029244|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene
mm9_v1_chr9_+_44048807_44048916	0.249369	BPTF.p2	BC038167|Ccdc153|270150|coiled-coil domain containing 153
mm9_v1_chr6_-_57273628_57273628	0.249329	BPTF.p2	NM_134184|Vmn1r16|171202|vomeronasal 1 receptor 16
mm9_v1_chr13_-_84204320_84204376	0.248953	BPTF.p2	AK082072|LOC553095|553095|hypothetical LOC553095
mm9_v1_chr16_+_16870955_16870979	0.248843	BPTF.p2	AK146475|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr1_-_180259336_180259529	0.248747	BPTF.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr19_+_34035676_34035740	0.248699	BPTF.p2	AK009923|Lipf|67717|lipase, gastric	AK009428|Lipf|67717|lipase, gastric	AK009431|Lipf|67717|lipase, gastric	AK009546|Lipf|67717|lipase, gastric	AK075913|Lipf|67717|lipase, gastric	AK009300|Lipf|67717|lipase, gastric	AK009359|Lipf|67717|lipase, gastric	AK009413|Lipf|67717|lipase, gastric	AK009437|Lipf|67717|lipase, gastric	AK009459|Lipf|67717|lipase, gastric	AK009473|Lipf|67717|lipase, gastric	AK009474|Lipf|67717|lipase, gastric	AK009523|Lipf|67717|lipase, gastric	AK009525|Lipf|67717|lipase, gastric	AK009537|Lipf|67717|lipase, gastric	AK009560|Lipf|67717|lipase, gastric	AK009571|Lipf|67717|lipase, gastric	AK009573|Lipf|67717|lipase, gastric	AK009729|Lipf|67717|lipase, gastric	AK009773|Lipf|67717|lipase, gastric	AK009875|Lipf|67717|lipase, gastric	AK009990|Lipf|67717|lipase, gastric	AK010019|Lipf|67717|lipase, gastric	AK010026|Lipf|67717|lipase, gastric	AK010035|Lipf|67717|lipase, gastric	AK010036|Lipf|67717|lipase, gastric	AK010058|Lipf|67717|lipase, gastric	AK010061|Lipf|67717|lipase, gastric	AK010091|Lipf|67717|lipase, gastric	AK010093|Lipf|67717|lipase, gastric	AK010103|Lipf|67717|lipase, gastric	AK010106|Lipf|67717|lipase, gastric	AK010110|Lipf|67717|lipase, gastric	AK010116|Lipf|67717|lipase, gastric	AK010123|Lipf|67717|lipase, gastric	AK010125|Lipf|67717|lipase, gastric	AK010139|Lipf|67717|lipase, gastric	AK010148|Lipf|67717|lipase, gastric	AK010173|Lipf|67717|lipase, gastric	AK010203|Lipf|67717|lipase, gastric	AK010231|Lipf|67717|lipase, gastric	AK010236|Lipf|67717|lipase, gastric	BC061067|Lipf|67717|lipase, gastric	NM_026334|Lipf|67717|lipase, gastric	AK009479|Lipf|67717|lipase, gastric	AK009544|Lipf|67717|lipase, gastric
mm9_v1_chr7_-_148358709_148358768	0.248471	BPTF.p2	AK145173|Rnh1|107702|ribonuclease/angiogenin inhibitor 1	NM_001172100|Rnh1|107702|ribonuclease/angiogenin inhibitor 1
mm9_v1_chr9_-_55359898_55360033	0.248471	BPTF.p2	BC096645|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	BC003432|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK133525|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK032830|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK168321|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK167572|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chr4_+_132091510_132091524	0.248383	BPTF.p2	BC035539|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8
mm9_v1_chr10_+_13686174_13686209	0.248245	BPTF.p2	AK147244|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147348|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147655|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	NM_010437|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr17_+_31657059_31657158	0.248029	BPTF.p2	NM_001083891|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	NM_030087|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK154477|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK018779|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	BC013640|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK077433|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK154191|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK160289|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3
mm9_v1_chr17_-_79407844_79407844	0.247848	BPTF.p2	AK030058|Prkd3|75292|protein kinase D3	NM_001171005|Prkd3|75292|protein kinase D3
mm9_v1_chr4_+_116799417_116799417	0.247818	BPTF.p2	AK029345|Tctex1d4|242646|Tctex1 domain containing 4	NM_175030|Tctex1d4|242646|Tctex1 domain containing 4
mm9_v1_chr4_+_101390232_101390324	0.247543	BPTF.p2	AK143989|Lepr|16847|leptin receptor
mm9_v1_chr4_-_33335761_33335761	0.247232	BPTF.p2	NM_001033225|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr2_-_155266518_155266522	0.246962	BPTF.p2	BC083187|Ncoa6|56406|nuclear receptor coactivator 6	NM_019825|Ncoa6|56406|nuclear receptor coactivator 6	BC031113|Ncoa6|56406|nuclear receptor coactivator 6
mm9_v1_chr16_+_94914273_94914275	0.246798	BPTF.p2	AK165966|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	AK163136|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr7_+_24416996_24417006	0.246569	BPTF.p2	AF324871|Vmn1r171|81012|vomeronasal 1 receptor 171	BC111911|Vmn1r171|81012|vomeronasal 1 receptor 171	NM_030737|Vmn1r171|81012|vomeronasal 1 receptor 171
mm9_v1_chr12_-_77347671_77347732	0.246419	BPTF.p2	AK016434|Tex21|80384|testis expressed gene 21	AK016471|Tex21|80384|testis expressed gene 21	AB000682|Tex21|80384|testis expressed gene 21	AK016448|Tex21|80384|testis expressed gene 21	BC100432|Tex21|80384|testis expressed gene 21	NM_001159532|Tex21|80384|testis expressed gene 21	NM_019784|Tex21|80384|testis expressed gene 21
mm9_v1_chr1_-_165015800_165015800	0.246045	BPTF.p2	AK019544|4921528O07Rik|78258|RIKEN cDNA 4921528O07 gene	NM_030071|4921528O07Rik|78258|RIKEN cDNA 4921528O07 gene
mm9_v1_chr13_-_67033920_67034045	0.245981	BPTF.p2	BC085282|Mterfd1|66410|MTERF domain containing 1	AK034645|Mterfd1|66410|MTERF domain containing 1	BC025173|Mterfd1|66410|MTERF domain containing 1	AK002299|Mterfd1|66410|MTERF domain containing 1	AK011934|Mterfd1|66410|MTERF domain containing 1	AK010525|Mterfd1|66410|MTERF domain containing 1	NM_025547|Mterfd1|66410|MTERF domain containing 1
mm9_v1_chr5_-_77738960_77739110	0.245913	BPTF.p2	AK139955|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK172681|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AB041537|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK017793|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK128920|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	BC017154|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK163935|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK019975|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK011533|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK157246|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	NM_019836|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene
mm9_v1_chr9_-_7387992_7388025	0.245388	BPTF.p2	AJ278461|Mmp1b|83996|matrix metallopeptidase 1b (interstitial collagenase)	NM_032007|Mmp1b|83996|matrix metallopeptidase 1b (interstitial collagenase)
mm9_v1_chr14_+_67853446_67853480	0.245238	BPTF.p2	BC050922|Ebf2|13592|early B-cell factor 2
mm9_v1_chr6_-_126114938_126114977	0.244935	BPTF.p2	BC065785|Ntf3|18205|neurotrophin 3	AK132586|Ntf3|18205|neurotrophin 3	NM_001164035|Ntf3|18205|neurotrophin 3
mm9_v1_chrX_+_7274259_7274353	0.243621	BPTF.p2	NM_173747|Gpkow|209416|G patch domain and KOW motifs	AK017864|Gpkow|209416|G patch domain and KOW motifs	AK144167|Gpkow|209416|G patch domain and KOW motifs	AK028433|Gpkow|209416|G patch domain and KOW motifs	BC092224|Gpkow|209416|G patch domain and KOW motifs
mm9_v1_chr5_-_86802390_86802444	0.243441	BPTF.p2	AF448809|Tmprss11d|231382|transmembrane protease, serine 11d	BC020151|Tmprss11d|231382|transmembrane protease, serine 11d	NM_145561|Tmprss11d|231382|transmembrane protease, serine 11d	AB053953|Tmprss11d|231382|transmembrane protease, serine 11d
mm9_v1_chr4_+_88481428_88481428	0.243416	BPTF.p2	BC120910|Ifna5|15968|interferon alpha 5	BC120911|Ifna5|15968|interferon alpha 5	NM_010505|Ifna5|15968|interferon alpha 5
mm9_v1_chr9_+_72961223_72961298	0.243374	BPTF.p2	AK153492|Rsl24d1|225215|ribosomal L24 domain containing 1	AK160194|Rsl24d1|225215|ribosomal L24 domain containing 1	BC003885|Rsl24d1|225215|ribosomal L24 domain containing 1	NM_198609|Rsl24d1|225215|ribosomal L24 domain containing 1	BC089481|Rsl24d1|225215|ribosomal L24 domain containing 1	AK164856|Rsl24d1|225215|ribosomal L24 domain containing 1
mm9_v1_chrX_+_68468175_68468259	0.243363	BPTF.p2	AK149997|Mtm1|17772|X-linked myotubular myopathy gene 1	NM_001164191|Mtm1|17772|X-linked myotubular myopathy gene 1	NM_001164192|Mtm1|17772|X-linked myotubular myopathy gene 1	NM_001164193|Mtm1|17772|X-linked myotubular myopathy gene 1	AK171475|Mtm1|17772|X-linked myotubular myopathy gene 1	AK031794|Mtm1|17772|X-linked myotubular myopathy gene 1	AK166452|Mtm1|17772|X-linked myotubular myopathy gene 1	BC090984|Mtm1|17772|X-linked myotubular myopathy gene 1	BC051022|Mtm1|17772|X-linked myotubular myopathy gene 1	AK032870|Mtm1|17772|X-linked myotubular myopathy gene 1	BC066847|Mtm1|17772|X-linked myotubular myopathy gene 1	AF073996|Mtm1|17772|X-linked myotubular myopathy gene 1	NM_019926|Mtm1|17772|X-linked myotubular myopathy gene 1	AK166759|Mtm1|17772|X-linked myotubular myopathy gene 1
mm9_v1_chr11_-_115971521_115971577	0.243306	BPTF.p2	AK031572|Trim47|217333|tripartite motif-containing 47	BC100317|Trim47|217333|tripartite motif-containing 47
mm9_v1_chr19_-_46114019_46114148	0.243011	BPTF.p2	NM_010697|Ldb1|16825|LIM domain binding 1	U69270|Ldb1|16825|LIM domain binding 1
mm9_v1_chr19_-_4201541_4201648	0.24287	BPTF.p2	BC082556|Rad9|19367|RAD9 homolog (S. pombe)	AF045663|Rad9|19367|RAD9 homolog (S. pombe)	NM_011237|Rad9|19367|RAD9 homolog (S. pombe)	AK138973|Rad9|19367|RAD9 homolog (S. pombe)	AK134293|Rad9|19367|RAD9 homolog (S. pombe)	AK165833|Rad9|19367|RAD9 homolog (S. pombe)
mm9_v1_chr2_-_101679136_101679136	0.242276	BPTF.p2	NM_001110849|Prr5l|72446|proline rich 5 like
mm9_v1_chr7_-_25917458_25917515	0.241888	BPTF.p2	AY746974|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC104488|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105647|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105920|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105921|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163554|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163555|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163556|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_011138|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57936|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57937|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57938|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57939|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57940|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57941|Pou2f2|18987|POU domain, class 2, transcription factor 2	AK156322|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC050258|Pou2f2|18987|POU domain, class 2, transcription factor 2	AY746973|Pou2f2|18987|POU domain, class 2, transcription factor 2
mm9_v1_chr17_+_21560190_21560333	0.241808	BPTF.p2	BC080782|Zfp54|22712|zinc finger protein 54	NM_011760|Zfp54|22712|zinc finger protein 54	AK148292|Zfp54|22712|zinc finger protein 54	AF080070|Zfp54|22712|zinc finger protein 54	AK012854|Zfp54|22712|zinc finger protein 54
mm9_v1_chr10_+_23640161_23640211	0.240682	BPTF.p2	BC125368|Taar1|111174|trace amine-associated receptor 1	BC125370|Taar1|111174|trace amine-associated receptor 1	NM_053205|Taar1|111174|trace amine-associated receptor 1
mm9_v1_chr3_+_127336055_127336062	0.240421	BPTF.p2	AK143190|Neurog2|11924|neurogenin 2	BC055743|Neurog2|11924|neurogenin 2	NM_009718|Neurog2|11924|neurogenin 2
mm9_v1_chr11_+_3558702_3558702	0.239765	BPTF.p2	BC059243|Morc2a|74522|microrchidia 2A	NM_198162|Morc2a|74522|microrchidia 2A
mm9_v1_chr12_+_82047269_82047362	0.23965	BPTF.p2	AK088358|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr6_+_56985906_56985906	0.23954	BPTF.p2	AF394951|Vmn1r8|171205|vomeronasal 1 receptor 8	NM_134187|Vmn1r8|171205|vomeronasal 1 receptor 8
mm9_v1_chr11_+_95275392_95275501	0.239517	BPTF.p2	NM_025287|Spop|20747|speckle-type POZ protein	AK168546|Spop|20747|speckle-type POZ protein	AK030746|Spop|20747|speckle-type POZ protein	AK132383|Spop|20747|speckle-type POZ protein	BC045205|Spop|20747|speckle-type POZ protein	AK004669|Spop|20747|speckle-type POZ protein	AK159482|Spop|20747|speckle-type POZ protein	AK028201|Spop|20747|speckle-type POZ protein	BC064809|Spop|20747|speckle-type POZ protein	AK168185|Spop|20747|speckle-type POZ protein	AK166581|Spop|20747|speckle-type POZ protein	AK160858|Spop|20747|speckle-type POZ protein
mm9_v1_chr1_-_58752798_58752832	0.239508	BPTF.p2	AK077190|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK016678|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK133373|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	NM_175370|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)
mm9_v1_chr8_+_37157910_37157939	0.238644	BPTF.p2	AK036672|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed	AK052494|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed	AK089749|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed
mm9_v1_chr7_+_36182053_36182081	0.238622	BPTF.p2	BC003981|Ccdc123|72140|coiled-coil domain containing 123	AK029107|Ccdc123|72140|coiled-coil domain containing 123
mm9_v1_chr2_-_69180643_69180677	0.237832	BPTF.p2	AF133903|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	AK144553|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_021022|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11
mm9_v1_chr2_+_30271579_30271778	0.237813	BPTF.p2	AK049184|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC006626|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC052852|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK160980|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AY035997|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK046288|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr13_-_55516542_55516592	0.237237	BPTF.p2	EU375560|Pfn3|75477|profilin 3	AK005930|Pfn3|75477|profilin 3	BC048629|Pfn3|75477|profilin 3	NM_029303|Pfn3|75477|profilin 3
mm9_v1_chr13_-_23515682_23515773	0.236936	BPTF.p2	AB021860|Abt1|30946|activator of basal transcription 1	AK019220|Abt1|30946|activator of basal transcription 1	AK019221|Abt1|30946|activator of basal transcription 1	BC082609|Abt1|30946|activator of basal transcription 1	AK009557|Abt1|30946|activator of basal transcription 1	AK029222|Abt1|30946|activator of basal transcription 1	NM_013924|Abt1|30946|activator of basal transcription 1
mm9_v1_chr4_-_49519417_49519429	0.236325	BPTF.p2	NM_007519|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase
mm9_v1_chr5_-_87919883_87919895	0.23622	BPTF.p2	BC048926|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1	AK140757|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1	NM_053184|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1
mm9_v1_chr11_-_106642357_106642481	0.235742	BPTF.p2	AK011169|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chrX_+_160528118_160528196	0.235603	BPTF.p2	AF178085|Tmem27|57394|transmembrane protein 27	NM_020626|Tmem27|57394|transmembrane protein 27	AK148534|Tmem27|57394|transmembrane protein 27	AK002337|Tmem27|57394|transmembrane protein 27	BC049912|Tmem27|57394|transmembrane protein 27
mm9_v1_chr2_+_152398479_152398479	0.235401	BPTF.p2	AK076875|Defb21|403172|defensin beta 21	DQ012032|Defb21|403172|defensin beta 21	NM_207276|Defb21|403172|defensin beta 21
mm9_v1_chr7_-_20262178_20262212	0.235158	BPTF.p2	NM_009695|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr11_+_59953583_59953674	0.235084	BPTF.p2	NM_001037764|Rai1|19377|retinoic acid induced 1	AY548172|Rai1|19377|retinoic acid induced 1	D29801|Rai1|19377|retinoic acid induced 1
mm9_v1_chr11_-_106649652_106649810	0.235049	BPTF.p2	BC108369|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK203495|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129873|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129874|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC086320|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC046554|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	X65627|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC062916|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK044792|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK076018|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK088887|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK129022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK135173|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK166045|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	NM_007840|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr3_-_89767429_89767429	0.23499	BPTF.p2	NM_001081182|Atp8b2|54667|ATPase, class I, type 8B, member 2
mm9_v1_chr2_+_92061718_92061757	0.234218	BPTF.p2	NM_001109690|Phf21a|192285|PHD finger protein 21A	AK137085|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr16_+_16870983_16871175	0.233573	BPTF.p2	BC031723|Top3b|21976|topoisomerase (DNA) III beta	NM_011624|Top3b|21976|topoisomerase (DNA) III beta	AK079765|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr5_+_21291100_21291100	0.233276	BPTF.p2	AK076874|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	NM_011188|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm9_v1_chr10_-_44178474_44178587	0.233176	BPTF.p2	AK133503|Prdm1|12142|PR domain containing 1, with ZNF domain	BC129801|Prdm1|12142|PR domain containing 1, with ZNF domain	NM_007548|Prdm1|12142|PR domain containing 1, with ZNF domain	U08185|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr16_+_91465229_91465258	0.232218	BPTF.p2	AK020819|A930006K02Rik|78433|RIKEN cDNA A930006K02 gene
mm9_v1_chr4_-_45333366_45333502	0.231727	BPTF.p2	AK006281|Exosc3|66362|exosome component 3	BC023669|Exosc3|66362|exosome component 3	BC054085|Exosc3|66362|exosome component 3	NM_025513|Exosc3|66362|exosome component 3	AK012689|Exosc3|66362|exosome component 3
mm9_v1_chr8_-_84927109_84927120	0.231721	BPTF.p2	AK085441|Il15|16168|interleukin 15	AK155616|Il15|16168|interleukin 15
mm9_v1_chr6_-_6831907_6832001	0.23101	BPTF.p2	AF033011|Dlx5|13395|distal-less homeobox 5	AF022075|Dlx5|13395|distal-less homeobox 5	AF022076|Dlx5|13395|distal-less homeobox 5	AF022077|Dlx5|13395|distal-less homeobox 5	AK134920|Dlx5|13395|distal-less homeobox 5	AK158772|Dlx5|13395|distal-less homeobox 5
mm9_v1_chr3_-_30799013_30799120	0.230613	BPTF.p2	AK050678|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr5_+_104864136_104864144	0.23061	BPTF.p2	AK160540|Spp1|20750|secreted phosphoprotein 1	NM_009263|Spp1|20750|secreted phosphoprotein 1	AK133555|Spp1|20750|secreted phosphoprotein 1	AK145099|Spp1|20750|secreted phosphoprotein 1	AK149588|Spp1|20750|secreted phosphoprotein 1	AK150819|Spp1|20750|secreted phosphoprotein 1	AK150845|Spp1|20750|secreted phosphoprotein 1	AK151562|Spp1|20750|secreted phosphoprotein 1	AK153089|Spp1|20750|secreted phosphoprotein 1	AK154908|Spp1|20750|secreted phosphoprotein 1	AK165393|Spp1|20750|secreted phosphoprotein 1	AK165965|Spp1|20750|secreted phosphoprotein 1	AK166395|Spp1|20750|secreted phosphoprotein 1	AK171158|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr6_-_28399248_28399339	0.230154	BPTF.p2	BC131908|Pax4|18506|paired box gene 4	BC131906|Pax4|18506|paired box gene 4	BC145168|Pax4|18506|paired box gene 4	BC145169|Pax4|18506|paired box gene 4	AB010557|Pax4|18506|paired box gene 4	AF145233|Pax4|18506|paired box gene 4	AB010558|Pax4|18506|paired box gene 4	AB008912|Pax4|18506|paired box gene 4	NM_001159925|Pax4|18506|paired box gene 4	NM_001159926|Pax4|18506|paired box gene 4	NM_011038|Pax4|18506|paired box gene 4
mm9_v1_chr11_+_106137853_106138061	0.230055	BPTF.p2	AK076581|Tcam1|75870|testicular cell adhesion molecule 1	NM_029467|Tcam1|75870|testicular cell adhesion molecule 1	AK016263|Tcam1|75870|testicular cell adhesion molecule 1	BC050746|Tcam1|75870|testicular cell adhesion molecule 1
mm9_v1_chr13_+_47218048_47218098	0.229875	BPTF.p2	AK038964|Rnf144b|218215|ring finger protein 144B	AK053529|Rnf144b|218215|ring finger protein 144B	NM_146042|Rnf144b|218215|ring finger protein 144B
mm9_v1_chr3_+_52072302_52072340	0.229697	BPTF.p2	AK137629|Foxo1|56458|forkhead box O1	AF114258|Foxo1|56458|forkhead box O1
mm9_v1_chr6_+_122503826_122503835	0.229641	BPTF.p2	NM_009645|Aicda|11628|activation-induced cytidine deaminase	AF132979|Aicda|11628|activation-induced cytidine deaminase
mm9_v1_chr1_-_58480910_58480931	0.229497	BPTF.p2	NM_001042634|Clk1|12747|CDC-like kinase 1
mm9_v1_chr6_-_71390481_71390504	0.228254	BPTF.p2	BC050876|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr9_+_121807472_121807540	0.227815	BPTF.p2	AK157140|Ccbp2|59289|chemokine binding protein 2
mm9_v1_chr11_-_42134509_42134538	0.226698	BPTF.p2	X51986|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chr3_+_90145575_90145575	0.225869	BPTF.p2	AF411837|Gatad2b|229542|GATA zinc finger domain containing 2B	BC130262|Gatad2b|229542|GATA zinc finger domain containing 2B	NM_139304|Gatad2b|229542|GATA zinc finger domain containing 2B
mm9_v1_chr9_-_13631482_13631562	0.225795	BPTF.p2	BC056968|Cep57|74360|centrosomal protein 57	AY251192|Cep57|74360|centrosomal protein 57	AK014873|Cep57|74360|centrosomal protein 57	BC030353|Cep57|74360|centrosomal protein 57	AK129053|Cep57|74360|centrosomal protein 57	NM_026665|Cep57|74360|centrosomal protein 57
mm9_v1_chr18_-_61874531_61874583	0.225515	BPTF.p2	BC024866|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr16_-_17911283_17911450	0.225497	BPTF.p2	AK088520|Dgcr14|27886|DiGeorge syndrome critical region gene 14	AK142684|Dgcr14|27886|DiGeorge syndrome critical region gene 14	AK148404|Dgcr14|27886|DiGeorge syndrome critical region gene 14	BC013711|Dgcr14|27886|DiGeorge syndrome critical region gene 14	AF037256|Dgcr14|27886|DiGeorge syndrome critical region gene 14	NM_001081633|Dgcr14|27886|DiGeorge syndrome critical region gene 14	NM_022408|Dgcr14|27886|DiGeorge syndrome critical region gene 14
mm9_v1_chr14_+_9047015_9047035	0.224422	BPTF.p2	AK159067|Kctd6|71393|potassium channel tetramerisation domain containing 6
mm9_v1_chr5_-_104406382_104406389	0.224226	BPTF.p2	BC019427|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13
mm9_v1_chr11_+_77845840_77845855	0.222782	BPTF.p2	AK011939|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13	BC115881|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13	AK046465|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13
mm9_v1_chr10_-_116333934_116333934	0.222646	BPTF.p2	AK144383|Gm239|237558|predicted gene 239	AK144411|Gm239|237558|predicted gene 239	NM_001033333|Gm239|237558|predicted gene 239
mm9_v1_chr6_+_77192615_77192722	0.222543	BPTF.p2	AK080836|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	NM_028880|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK014545|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK053345|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr4_+_63219786_63219927	0.222388	BPTF.p2	AK144990|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK030466|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK206525|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK161160|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene
mm9_v1_chr1_+_89021547_89021583	0.222306	BPTF.p2	BC145627|Akp3|11648|alkaline phosphatase 3, intestine, not Mn requiring	NM_007432|Akp3|11648|alkaline phosphatase 3, intestine, not Mn requiring	BC115745|Akp3|11648|alkaline phosphatase 3, intestine, not Mn requiring
mm9_v1_chr16_+_49699314_49699432	0.222285	BPTF.p2	DQ266091|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AF274590|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK047217|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	NM_028680|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK014731|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138143|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138144|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)
mm9_v1_chr3_-_153993432_153993614	0.222181	BPTF.p2	BC125281|Lhx8|16875|LIM homeobox protein 8	BC125283|Lhx8|16875|LIM homeobox protein 8	BC144768|Lhx8|16875|LIM homeobox protein 8	D49658|Lhx8|16875|LIM homeobox protein 8	AK165733|Lhx8|16875|LIM homeobox protein 8	AK160121|Lhx8|16875|LIM homeobox protein 8	NM_010713|Lhx8|16875|LIM homeobox protein 8	AJ000338|Lhx8|16875|LIM homeobox protein 8
mm9_v1_chr3_-_94386590_94386623	0.22197	BPTF.p2	AK147452|Snx27|76742|sorting nexin family member 27	NM_001082484|Snx27|76742|sorting nexin family member 27	NM_029721|Snx27|76742|sorting nexin family member 27
mm9_v1_chr1_-_172236462_172236462	0.221751	BPTF.p2	NM_001198955|Gm7694|665574|predicted gene 7694
mm9_v1_chr5_+_136533136_136533238	0.221338	BPTF.p2	BC115563|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene	BC115564|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene	NM_027158|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene	BC099515|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene
mm9_v1_chr11_+_79391766_79391883	0.221286	BPTF.p2	AK053047|Nf1|18015|neurofibromatosis 1
mm9_v1_chr10_-_124765435_124765590	0.221023	BPTF.p2	BC117803|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC117804|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC126960|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC089606|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	AF058054|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	NM_011391|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm9_v1_chr11_+_67346499_67346579	0.220671	BPTF.p2	NM_008088|Gas7|14457|growth arrest specific 7	BC120528|Gas7|14457|growth arrest specific 7	BC120530|Gas7|14457|growth arrest specific 7
mm9_v1_chr15_-_102552527_102552608	0.220645	BPTF.p2	AK087513|Calcoco1|67488|calcium binding and coiled coil domain 1	NM_026192|Calcoco1|67488|calcium binding and coiled coil domain 1
mm9_v1_chr2_+_144096752_144096785	0.220501	BPTF.p2	AK031535|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	AK049565|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	NM_028984|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr4_-_116300068_116300103	0.220324	BPTF.p2	BC004693|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AF095722|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK008295|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK083333|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	NM_001081475|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)
mm9_v1_chr13_-_67856070_67856070	0.219873	BPTF.p2	BC055337|Zfp85-rs1|22746|zinc finger protein 85, related sequence 1	BC055756|Zfp85-rs1|22746|zinc finger protein 85, related sequence 1	NM_001001130|Zfp85-rs1|22746|zinc finger protein 85, related sequence 1
mm9_v1_chr19_-_24975686_24975798	0.219666	BPTF.p2	BC138432|Foxd4|14237|forkhead box D4	BC138434|Foxd4|14237|forkhead box D4	NM_008022|Foxd4|14237|forkhead box D4
mm9_v1_chr7_+_3293008_3293247	0.219216	BPTF.p2	NM_001093766|Myadm|50918|myeloid-associated differentiation marker	BC119364|Myadm|50918|myeloid-associated differentiation marker	BC119368|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr16_+_89031943_89031945	0.218977	BPTF.p2	BC107313|Krtap6-1|16700|keratin associated protein 6-1	BC107314|Krtap6-1|16700|keratin associated protein 6-1	BC127045|Krtap6-1|16700|keratin associated protein 6-1	BC127046|Krtap6-1|16700|keratin associated protein 6-1	D86420|Krtap6-1|16700|keratin associated protein 6-1	NM_010672|Krtap6-1|16700|keratin associated protein 6-1	BC114404|Krtap6-1|16700|keratin associated protein 6-1	BC114532|Krtap6-1|16700|keratin associated protein 6-1
mm9_v1_chr5_+_130322875_130322895	0.218654	BPTF.p2	AK138300|Sumf2|67902|sulfatase modifying factor 2	AK013017|Sumf2|67902|sulfatase modifying factor 2	AK166216|Sumf2|67902|sulfatase modifying factor 2	AK140169|Sumf2|67902|sulfatase modifying factor 2
mm9_v1_chr7_-_69565024_69565050	0.218337	BPTF.p2	BC054771|Mkrn3|22652|makorin, ring finger protein, 3	NM_011746|Mkrn3|22652|makorin, ring finger protein, 3	AK134870|Mkrn3|22652|makorin, ring finger protein, 3
mm9_v1_chr4_+_117507993_117508058	0.217739	BPTF.p2	BC021828|Slc6a9|14664|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
mm9_v1_chr19_-_4175478_4175577	0.217724	BPTF.p2	NM_134148|Carns1|107239|carnosine synthase 1
mm9_v1_chr1_+_87423176_87423243	0.217317	BPTF.p2	AK156961|Csprs|114564|component of Sp100-rs
mm9_v1_chr18_-_35658485_35658600	0.217176	BPTF.p2	BC028488|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AJ297884|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AK170415|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016466|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016119|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	NM_030749|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm9_v1_chr5_+_130322861_130322869	0.216962	BPTF.p2	AK076022|Sumf2|67902|sulfatase modifying factor 2	AK157784|Sumf2|67902|sulfatase modifying factor 2	NM_026445|Sumf2|67902|sulfatase modifying factor 2
mm9_v1_chr15_-_97077552_97077717	0.216818	BPTF.p2	BC095990|Amigo2|105827|adhesion molecule with Ig like domain 2	AK030848|Amigo2|105827|adhesion molecule with Ig like domain 2	AK038783|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164563|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164602|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_178114|Amigo2|105827|adhesion molecule with Ig like domain 2
mm9_v1_chr8_-_72974533_72974552	0.21656	BPTF.p2	AK188349|Klhl26|234378|kelch-like 26 (Drosophila)
mm9_v1_chr13_-_21925343_21925443	0.216087	BPTF.p2	BC110626|Hist1h2ap|319171|histone cluster 1, H2ap	BC116373|Hist1h2ai|319191|histone cluster 1, H2ai	BC127164|Hist1h2ai|319191|histone cluster 1, H2ai	BC133661|Hist1h2ap|319171|histone cluster 1, H2ap	BC134370|Hist1h2ah|319168|histone cluster 1, H2ah	NM_178185|Hist1h2ap|319171|histone cluster 1, H2ap	BC062251|Hist1h2ap|319171|histone cluster 1, H2ap	BC090402|Hist1h2ap|319171|histone cluster 1, H2ap	AK146846|Hist1h2ap|319171|histone cluster 1, H2ap	AK145443|Hist1h2ap|319171|histone cluster 1, H2ap	BC147161|Hist1h2ap|319171|histone cluster 1, H2ap	BC147162|Hist1h2ap|319171|histone cluster 1, H2ap	NM_001177544|Hist1h2ao|665433|histone cluster 1, H2ao
mm9_v1_chr14_+_75642093_75642165	0.215921	BPTF.p2	AF164524|Cpb2|56373|carboxypeptidase B2 (plasma)	NM_019775|Cpb2|56373|carboxypeptidase B2 (plasma)	AK004045|Cpb2|56373|carboxypeptidase B2 (plasma)	BC089577|Cpb2|56373|carboxypeptidase B2 (plasma)	AB021968|Cpb2|56373|carboxypeptidase B2 (plasma)	AF186188|Cpb2|56373|carboxypeptidase B2 (plasma)
mm9_v1_chr7_-_36103433_36103463	0.215486	BPTF.p2	BC100577|Gpatch1|67471|G patch domain containing 1	AK154571|Gpatch1|67471|G patch domain containing 1	AK014367|Gpatch1|67471|G patch domain containing 1	BC125584|Gpatch1|67471|G patch domain containing 1	BC132155|Gpatch1|67471|G patch domain containing 1	AK004868|Gpatch1|67471|G patch domain containing 1	NM_026181|Gpatch1|67471|G patch domain containing 1
mm9_v1_chrX_+_8849858_8849881	0.215297	BPTF.p2	BC027097|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr8_+_87432522_87432575	0.215158	BPTF.p2	AK145192|Dnase2a|13423|deoxyribonuclease II alpha	NM_010062|Dnase2a|13423|deoxyribonuclease II alpha	AK167277|Dnase2a|13423|deoxyribonuclease II alpha	BC058609|Dnase2a|13423|deoxyribonuclease II alpha
mm9_v1_chr2_-_83781362_83781384	0.214505	BPTF.p2	BC120837|Zswim2|71861|zinc finger, SWIM domain containing 2	BC144860|Zswim2|71861|zinc finger, SWIM domain containing 2	AK006367|Zswim2|71861|zinc finger, SWIM domain containing 2	NM_027964|Zswim2|71861|zinc finger, SWIM domain containing 2	AK017097|Zswim2|71861|zinc finger, SWIM domain containing 2
mm9_v1_chr16_+_95924069_95924179	0.214028	BPTF.p2	AK150175|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK014602|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005486|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	J04103|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005504|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK145852|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr17_+_31814873_31814975	0.213624	BPTF.p2	AK143463|Cryaa|12954|crystallin, alpha A	BC085170|Cryaa|12954|crystallin, alpha A	BC085172|Cryaa|12954|crystallin, alpha A	NM_013501|Cryaa|12954|crystallin, alpha A	AJ310308|Cryaa|12954|crystallin, alpha A	BC092385|Cryaa|12954|crystallin, alpha A	J00376|Cryaa|12954|crystallin, alpha A
mm9_v1_chr9_-_57613666_57613666	0.212976	BPTF.p2	AK146942|Clk3|102414|CDC-like kinase 3	AK167300|Clk3|102414|CDC-like kinase 3	NM_007713|Clk3|102414|CDC-like kinase 3
mm9_v1_chr1_-_184271729_184271762	0.212632	BPTF.p2	BC094542|Fbxo28|67948|F-box protein 28	NM_175127|Fbxo28|67948|F-box protein 28	AK076211|Fbxo28|67948|F-box protein 28	AK077653|Fbxo28|67948|F-box protein 28
mm9_v1_chr7_+_31278689_31278695	0.212504	BPTF.p2	AF222851|Prodh2|56189|proline dehydrogenase (oxidase) 2	BC018182|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chrX_-_143838294_143838374	0.212403	BPTF.p2	BC003723|Il13ra2|16165|interleukin 13 receptor, alpha 2	NM_008356|Il13ra2|16165|interleukin 13 receptor, alpha 2	U65747|Il13ra2|16165|interleukin 13 receptor, alpha 2
mm9_v1_chr4_-_133928435_133928461	0.212347	BPTF.p2	AK164184|Extl1|56219|exostoses (multiple)-like 1	AK085075|Extl1|56219|exostoses (multiple)-like 1	AK172619|Extl1|56219|exostoses (multiple)-like 1	NM_019578|Extl1|56219|exostoses (multiple)-like 1
mm9_v1_chr2_-_42509117_42509117	0.21205	BPTF.p2	AF270884|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	NM_053011|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)
mm9_v1_chr9_+_113840051_113840064	0.211306	BPTF.p2	AK143282|Ubp1|22221|upstream binding protein 1	NM_001083319|Ubp1|22221|upstream binding protein 1	NM_013699|Ubp1|22221|upstream binding protein 1
mm9_v1_chr4_-_11181335_11181349	0.211195	BPTF.p2	BC049092|Ints8|72656|integrator complex subunit 8	BC057618|Ints8|72656|integrator complex subunit 8
mm9_v1_chr4_+_135842023_135842037	0.210967	BPTF.p2	AK148255|Zfp46|22704|zinc finger protein 46
mm9_v1_chr11_-_5778204_5778260	0.210559	BPTF.p2	BC003342|Pold2|18972|polymerase (DNA directed), delta 2, regulatory subunit	Z72486|Pold2|18972|polymerase (DNA directed), delta 2, regulatory subunit	AK013901|Pold2|18972|polymerase (DNA directed), delta 2, regulatory subunit	NM_008894|Pold2|18972|polymerase (DNA directed), delta 2, regulatory subunit
mm9_v1_chr13_+_30228352_30228364	0.210493	BPTF.p2	NM_153546|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	BC023845|Mboat1|218121|membrane bound O-acyltransferase domain containing 1
mm9_v1_chrX_-_130811415_130811532	0.209956	BPTF.p2	BC056937|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK129030|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK028999|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK137595|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK049523|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK046928|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	NM_001167994|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	NM_001167995|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	NM_172540|Trmt2b|215201|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
mm9_v1_chr1_+_129670740_129670806	0.209104	BPTF.p2	BC054122|Ccnt2|72949|cyclin T2	NM_028399|Ccnt2|72949|cyclin T2	AK156231|Ccnt2|72949|cyclin T2	AK154439|Ccnt2|72949|cyclin T2	AK156621|Ccnt2|72949|cyclin T2	AK152399|Ccnt2|72949|cyclin T2	AK036772|Ccnt2|72949|cyclin T2	AK013634|Ccnt2|72949|cyclin T2	AK049863|Ccnt2|72949|cyclin T2
mm9_v1_chr2_+_160471623_160471632	0.208463	BPTF.p2	AK145538|Top1|21969|topoisomerase (DNA) I	NM_009408|Top1|21969|topoisomerase (DNA) I
mm9_v1_chr8_+_74200281_74200478	0.208373	BPTF.p2	NM_001190830|Jak3|16453|Janus kinase 3	NM_010589|Jak3|16453|Janus kinase 3	AK088365|Jak3|16453|Janus kinase 3	L40172|Jak3|16453|Janus kinase 3	AK164520|Jak3|16453|Janus kinase 3	AK142178|Jak3|16453|Janus kinase 3	BC027234|Jak3|16453|Janus kinase 3	AK156646|Jak3|16453|Janus kinase 3
mm9_v1_chr4_-_150026205_150026286	0.208138	BPTF.p2	AK134677|Slc45a1|242773|solute carrier family 45, member 1	BC051188|Slc45a1|242773|solute carrier family 45, member 1	AK134683|Slc45a1|242773|solute carrier family 45, member 1	AK158002|Slc45a1|242773|solute carrier family 45, member 1	AK082651|Slc45a1|242773|solute carrier family 45, member 1	NM_173774|Slc45a1|242773|solute carrier family 45, member 1
mm9_v1_chr7_-_129164546_129164728	0.208043	BPTF.p2	AK187372|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK129280|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	BC062933|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK004632|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK154904|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK143691|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK159953|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK149798|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	NM_028758|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm9_v1_chr4_+_155384040_155384070	0.207531	BPTF.p2	AK198663|Sdf4|20318|stromal cell derived factor 4
mm9_v1_chr17_-_30729995_30730086	0.207067	BPTF.p2	
mm9_v1_chr16_+_84835361_84835405	0.207012	BPTF.p2	AY282793|Gabpa|14390|GA repeat binding protein, alpha	M74515|Gabpa|14390|GA repeat binding protein, alpha	BC052448|Gabpa|14390|GA repeat binding protein, alpha	NM_008065|Gabpa|14390|GA repeat binding protein, alpha
mm9_v1_chr19_+_36158191_36158279	0.206783	BPTF.p2	NM_019428|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK004137|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	BC062146|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	U95123|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK160536|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK169253|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)
mm9_v1_chr2_+_151907264_151907264	0.20624	BPTF.p2	NM_001160410|Scrt2|545474|scratch homolog 2, zinc finger protein (Drosophila)
mm9_v1_chr9_+_3335472_3335500	0.20572	BPTF.p2	AK020197|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK054267|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK081459|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK133489|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK041810|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK033352|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)
mm9_v1_chr9_-_78226334_78226394	0.205354	BPTF.p2	AB283026|Ooep|67968|oocyte expressed protein homolog (dog)	BC062245|Ooep|67968|oocyte expressed protein homolog (dog)	AK133554|Ooep|67968|oocyte expressed protein homolog (dog)	AK135950|Ooep|67968|oocyte expressed protein homolog (dog)	AK136199|Ooep|67968|oocyte expressed protein homolog (dog)	AK145510|Ooep|67968|oocyte expressed protein homolog (dog)	AK010266|Ooep|67968|oocyte expressed protein homolog (dog)	AK010809|Ooep|67968|oocyte expressed protein homolog (dog)	DQ238107|Ooep|67968|oocyte expressed protein homolog (dog)	NM_026480|Ooep|67968|oocyte expressed protein homolog (dog)
mm9_v1_chr10_+_120802099_120802365	0.20476	BPTF.p2	AK040524|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK049162|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK054046|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	NM_029364|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK030773|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK135016|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK170791|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	BC055328|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK087265|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK149863|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK165917|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK169485|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK165180|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK164907|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK083597|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK159562|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK197322|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK200155|Gns|75612|glucosamine (N-acetyl)-6-sulfatase	AK205939|Gns|75612|glucosamine (N-acetyl)-6-sulfatase
mm9_v1_chr5_-_138596915_138596971	0.204702	BPTF.p2	BC052453|Zfp113|56314|zinc finger protein 113	BC054525|Zfp113|56314|zinc finger protein 113	BC056991|Zfp113|56314|zinc finger protein 113	AF167320|Zfp113|56314|zinc finger protein 113	AK076349|Zfp113|56314|zinc finger protein 113	AK220556|Zfp113|56314|zinc finger protein 113	NM_019747|Zfp113|56314|zinc finger protein 113
mm9_v1_chr2_+_30271550_30271576	0.204481	BPTF.p2	AK031591|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	NM_138748|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr17_+_87153022_87153066	0.203345	BPTF.p2	AK158430|Epas1|13819|endothelial PAS domain protein 1
mm9_v1_chr12_+_60230704_60230799	0.203289	BPTF.p2	NM_001165254|Ctage5|217615|CTAGE family, member 5	NM_146034|Ctage5|217615|CTAGE family, member 5	AK029466|Ctage5|217615|CTAGE family, member 5	AK080312|Ctage5|217615|CTAGE family, member 5	BC026864|Ctage5|217615|CTAGE family, member 5	AK087188|Ctage5|217615|CTAGE family, member 5	AK053010|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr7_-_110920107_110920107	0.203259	BPTF.p2	NM_013621|Olfr69|18370|olfactory receptor 69
mm9_v1_chr2_-_32549637_32549722	0.202985	BPTF.p2	BC005484|Fpgs|14287|folylpolyglutamyl synthetase	U32197|Fpgs|14287|folylpolyglutamyl synthetase	AK041952|Fpgs|14287|folylpolyglutamyl synthetase	AK157040|Fpgs|14287|folylpolyglutamyl synthetase	U33557|Fpgs|14287|folylpolyglutamyl synthetase	NM_010236|Fpgs|14287|folylpolyglutamyl synthetase
mm9_v1_chr13_+_49063750_49063790	0.202536	BPTF.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr6_+_89046108_89046173	0.202388	BPTF.p2	BC098480|4933427D06Rik|232217|RIKEN cDNA 4933427D06 gene	NM_175017|4933427D06Rik|232217|RIKEN cDNA 4933427D06 gene	AK030235|4933427D06Rik|232217|RIKEN cDNA 4933427D06 gene
mm9_v1_chr4_-_88940294_88940522	0.202261	BPTF.p2	EU071702|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	AB221638|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	BC058190|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	L76092|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	S80650|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	NM_009877|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A
mm9_v1_chr5_+_34974750_34974884	0.202006	BPTF.p2	
mm9_v1_chr18_-_38157190_38157227	0.201996	BPTF.p2	AK053122|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	BC068145|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	AK220486|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	NM_139206|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
mm9_v1_chr13_+_23673433_23673471	0.201921	BPTF.p2	NM_175654|Hist1h4d|319156|histone cluster 1, H4d	BC119611|Hist1h4d|319156|histone cluster 1, H4d
mm9_v1_chr4_-_11181388_11181409	0.201789	BPTF.p2	AK140829|Ints8|72656|integrator complex subunit 8	NM_001159595|Ints8|72656|integrator complex subunit 8	NM_178112|Ints8|72656|integrator complex subunit 8
mm9_v1_chr13_+_74075268_74075296	0.201776	BPTF.p2	AK154645|Brd9|105246|bromodomain containing 9	AK142152|Brd9|105246|bromodomain containing 9	BC031484|Brd9|105246|bromodomain containing 9	NM_001024508|Brd9|105246|bromodomain containing 9
mm9_v1_chr3_-_109946355_109946392	0.201716	BPTF.p2	BC079881|Ntng1|80883|netrin G1	NM_001163348|Ntng1|80883|netrin G1	NM_001163349|Ntng1|80883|netrin G1	NM_001163350|Ntng1|80883|netrin G1	NM_001163351|Ntng1|80883|netrin G1	NM_030699|Ntng1|80883|netrin G1	NM_133488|Ntng1|80883|netrin G1	AK134467|Ntng1|80883|netrin G1
mm9_v1_chr17_-_56439695_56439708	0.201145	BPTF.p2	BC100496|Arrdc5|76920|arrestin domain containing 5	NM_029799|Arrdc5|76920|arrestin domain containing 5
mm9_v1_chr18_-_55149819_55149833	0.200688	BPTF.p2	AK051334|Zfp608|269023|zinc finger protein 608	NM_175751|Zfp608|269023|zinc finger protein 608
mm9_v1_chr16_-_89571427_89571427	0.200091	BPTF.p2	NM_001113406|Krtap11-1|16693|keratin associated protein 11-1
mm9_v1_chr11_+_62875160_62875262	0.20008	BPTF.p2	AK016718|Tekt3|71062|tektin 3	AY252101|Tekt3|71062|tektin 3	NM_027660|Tekt3|71062|tektin 3	BC139074|Tekt3|71062|tektin 3	BC139075|Tekt3|71062|tektin 3	BC127605|Tekt3|71062|tektin 3	BC128270|Tekt3|71062|tektin 3
mm9_v1_chr1_-_53353810_53353878	0.199877	BPTF.p2	AK045010|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	BC028939|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	NM_153556|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)	AK140689|Pms1|227099|postmeiotic segregation increased 1 (S. cerevisiae)
mm9_v1_chr17_+_12571494_12571524	0.199483	BPTF.p2	BC057186|Plg|18815|plasminogen	AK132254|Plg|18815|plasminogen	J04766|Plg|18815|plasminogen	AK040840|Plg|18815|plasminogen
mm9_v1_chr9_+_20447739_20447785	0.198849	BPTF.p2	AK051149|Ubl5|66177|ubiquitin-like 5	NM_025401|Ubl5|66177|ubiquitin-like 5	AK040449|Ubl5|66177|ubiquitin-like 5
mm9_v1_chr4_+_11486066_11486118	0.198436	BPTF.p2	AK078439|Rad54b|623474|RAD54 homolog B (S. cerevisiae)	BC057604|Rad54b|623474|RAD54 homolog B (S. cerevisiae)	NM_001039556|Rad54b|623474|RAD54 homolog B (S. cerevisiae)
mm9_v1_chr18_-_65553541_65553541	0.198134	BPTF.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr6_-_93863547_93863683	0.197562	BPTF.p2	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chrX_-_151384047_151384111	0.196875	BPTF.p2	AY438669|Magea3|17139|melanoma antigen, family A, 3	BC119064|Magea3|17139|melanoma antigen, family A, 3	BC119066|Magea3|17139|melanoma antigen, family A, 3	NM_020017|Magea3|17139|melanoma antigen, family A, 3
mm9_v1_chr16_+_37580238_37580255	0.19685	BPTF.p2	NM_013547|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr4_+_143125856_143125856	0.196822	BPTF.p2	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040
mm9_v1_chr4_+_143141602_143141602	0.196822	BPTF.p2	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040
mm9_v1_chr4_+_155384167_155384192	0.196812	BPTF.p2	
mm9_v1_chr10_-_60159237_60159237	0.196719	BPTF.p2	AK016015|Cdh23|22295|cadherin 23 (otocadherin)	AK016365|Cdh23|22295|cadherin 23 (otocadherin)	NM_023370|Cdh23|22295|cadherin 23 (otocadherin)
mm9_v1_chr1_-_155396839_155396845	0.196686	BPTF.p2	BC022734|Npl|74091|N-acetylneuraminate pyruvate lyase	AK154216|F630010C12Rik|100038670|RIKEN cDNA F630010C12 gene	AK002734|Npl|74091|N-acetylneuraminate pyruvate lyase	NM_028749|Npl|74091|N-acetylneuraminate pyruvate lyase	AK088859|Npl|74091|N-acetylneuraminate pyruvate lyase
mm9_v1_chr15_+_76369247_76369393	0.195866	BPTF.p2	AK161447|Gpr172b|52710|G protein-coupled receptor 172B	AK142597|Gpr172b|52710|G protein-coupled receptor 172B	AK080449|Gpr172b|52710|G protein-coupled receptor 172B	BC016264|Gpr172b|52710|G protein-coupled receptor 172B	AK152335|Gpr172b|52710|G protein-coupled receptor 172B	AK029579|Gpr172b|52710|G protein-coupled receptor 172B	NM_029643|Gpr172b|52710|G protein-coupled receptor 172B	AK008081|Gpr172b|52710|G protein-coupled receptor 172B	AK032015|Gpr172b|52710|G protein-coupled receptor 172B
mm9_v1_chr1_-_72920776_72921027	0.19583	BPTF.p2	X81583|Igfbp5|16011|insulin-like growth factor binding protein 5	BC054812|Igfbp5|16011|insulin-like growth factor binding protein 5	BC026805|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr8_+_47249009_47249101	0.195633	BPTF.p2	AK048125|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	AK129358|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	AK082519|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	BC049135|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	AK020894|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	AK020776|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	AK016776|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene
mm9_v1_chr13_-_115722244_115722337	0.194926	BPTF.p2	Z29987|Itga2|16398|integrin alpha 2	BC065139|Itga2|16398|integrin alpha 2	NM_008396|Itga2|16398|integrin alpha 2	AK051050|Itga2|16398|integrin alpha 2	AK156604|Itga2|16398|integrin alpha 2	AK036572|Itga2|16398|integrin alpha 2
mm9_v1_chr2_+_25621067_25621088	0.194908	BPTF.p2	BC116816|Lcn3|16820|lipocalin 3	BC116818|Lcn3|16820|lipocalin 3	BC144882|Lcn3|16820|lipocalin 3	D38580|Lcn3|16820|lipocalin 3	NM_010694|Lcn3|16820|lipocalin 3
mm9_v1_chr3_+_40439675_40439741	0.19476	BPTF.p2	NM_175515|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	AK035092|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC125523|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)	BC132387|Intu|380614|inturned planar cell polarity effector homolog (Drosophila)
mm9_v1_chr19_+_34658016_34658052	0.19473	BPTF.p2	AK153226|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	NM_010501|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK077459|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	AK151032|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC089563|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	L32974|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3	BC003804|Ifit3|15959|interferon-induced protein with tetratricopeptide repeats 3
mm9_v1_chr8_-_90886051_90886133	0.194562	BPTF.p2	AF084259|Brd7|26992|bromodomain containing 7	AK142758|Brd7|26992|bromodomain containing 7	NM_012047|Brd7|26992|bromodomain containing 7	AK138934|Brd7|26992|bromodomain containing 7
mm9_v1_chr4_-_12015073_12015153	0.194514	BPTF.p2	AK017238|Tmem67|329795|transmembrane protein 67	AK039177|Tmem67|329795|transmembrane protein 67	AK042835|Tmem67|329795|transmembrane protein 67	AK133059|Tmem67|329795|transmembrane protein 67	AK045429|Tmem67|329795|transmembrane protein 67	NM_177861|Tmem67|329795|transmembrane protein 67	AK077246|Tmem67|329795|transmembrane protein 67
mm9_v1_chr4_+_116924633_116924654	0.194445	BPTF.p2	BC019937|Tmem53|68777|transmembrane protein 53	BC020121|Tmem53|68777|transmembrane protein 53	AK005104|Tmem53|68777|transmembrane protein 53
mm9_v1_chr15_-_39688931_39689018	0.193567	BPTF.p2	AF227731|Dpys|64705|dihydropyrimidinase	BC037086|Dpys|64705|dihydropyrimidinase	AF249296|Dpys|64705|dihydropyrimidinase	AK004899|Dpys|64705|dihydropyrimidinase	AK004822|Dpys|64705|dihydropyrimidinase	NM_001164466|Dpys|64705|dihydropyrimidinase	NM_022722|Dpys|64705|dihydropyrimidinase
mm9_v1_chr12_+_54349663_54349663	0.193183	BPTF.p2	AF173871|Npas3|27386|neuronal PAS domain protein 3	BC120885|Npas3|27386|neuronal PAS domain protein 3	BC148199|Npas3|27386|neuronal PAS domain protein 3	NM_013780|Npas3|27386|neuronal PAS domain protein 3
mm9_v1_chr14_+_29318658_29318741	0.192816	BPTF.p2	NM_009524|Wnt5a|22418|wingless-related MMTV integration site 5A	AK031597|Wnt5a|22418|wingless-related MMTV integration site 5A	M89798|Wnt5a|22418|wingless-related MMTV integration site 5A
mm9_v1_chr7_+_74367429_74367537	0.192564	BPTF.p2	AK015716|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	NM_175215|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK172203|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK033681|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	BC030310|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK039294|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	AK143241|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	NM_001191051|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4	BC094328|Lysmd4|75099|LysM, putative peptidoglycan-binding, domain containing 4
mm9_v1_chrX_+_104863302_104863302	0.192519	BPTF.p2	AF516208|Tbx22|245572|T-box 22	NM_181319|Tbx22|245572|T-box 22
mm9_v1_chr3_+_134951618_134951625	0.191967	BPTF.p2	AK007603|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr2_-_168781086_168781086	0.191965	BPTF.p2	NM_009564|Zfp64|22722|zinc finger protein 64
mm9_v1_chr14_-_65515555_65515693	0.191841	BPTF.p2	BC002212|Hmbox1|219150|homeobox containing 1
mm9_v1_chr9_+_123715592_123715616	0.191527	BPTF.p2	AF305709|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	NM_030712|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK153914|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK052901|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AF301018|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK137703|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	BC096491|Cxcr6|80901|chemokine (C-X-C motif) receptor 6
mm9_v1_chr7_+_27320083_27320085	0.191429	BPTF.p2	NM_001048219|Nlrp9a|233001|NLR family, pyrin domain containing 9A	NM_001048220|Nlrp9a|233001|NLR family, pyrin domain containing 9A	AK139925|Nlrp9a|233001|NLR family, pyrin domain containing 9A	AK145355|Nlrp9a|233001|NLR family, pyrin domain containing 9A
mm9_v1_chr8_-_90483392_90483493	0.191135	BPTF.p2	AY256893|Zfp423|94187|zinc finger protein 423	AK122365|Zfp423|94187|zinc finger protein 423	NM_033327|Zfp423|94187|zinc finger protein 423
mm9_v1_chr2_+_120393393_120393485	0.191103	BPTF.p2	AK019162|Snap23|20619|synaptosomal-associated protein 23	NM_001177792|Snap23|20619|synaptosomal-associated protein 23	NM_001177793|Snap23|20619|synaptosomal-associated protein 23	NM_009222|Snap23|20619|synaptosomal-associated protein 23	AK171763|Snap23|20619|synaptosomal-associated protein 23	AK017311|Snap23|20619|synaptosomal-associated protein 23	BC070456|Snap23|20619|synaptosomal-associated protein 23	AB007444|Snap23|20619|synaptosomal-associated protein 23
mm9_v1_chr6_-_47780444_47780540	0.189848	BPTF.p2	BC138897|Zfp786|330301|zinc finger protein 786	AK080438|Zfp786|330301|zinc finger protein 786	NM_177882|Zfp786|330301|zinc finger protein 786
mm9_v1_chr11_+_101848369_101848394	0.189495	BPTF.p2	AK005669|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	NM_029287|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	BC116819|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	BC116821|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	BC100517|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene
mm9_v1_chr5_+_151476361_151476427	0.188979	BPTF.p2	AY102267|Pds5b|100710|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	NM_175310|Pds5b|100710|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm9_v1_chr17_-_48590807_48590825	0.188066	BPTF.p2	AK162634|Tspo2|70026|translocator protein 2	AK011003|Tspo2|70026|translocator protein 2	NM_027292|Tspo2|70026|translocator protein 2
mm9_v1_chr13_+_21902235_21902335	0.187894	BPTF.p2	BC147161|Hist1h2ap|319171|histone cluster 1, H2ap	BC147162|Hist1h2ap|319171|histone cluster 1, H2ap	NM_001177544|Hist1h2ao|665433|histone cluster 1, H2ao	AK145443|Hist1h2ap|319171|histone cluster 1, H2ap	AK146846|Hist1h2ap|319171|histone cluster 1, H2ap	BC062251|Hist1h2ap|319171|histone cluster 1, H2ap	BC090402|Hist1h2ap|319171|histone cluster 1, H2ap	BC110626|Hist1h2ap|319171|histone cluster 1, H2ap	BC116373|Hist1h2ai|319191|histone cluster 1, H2ai	BC127164|Hist1h2ai|319191|histone cluster 1, H2ai	BC133661|Hist1h2ap|319171|histone cluster 1, H2ap	BC134370|Hist1h2ah|319168|histone cluster 1, H2ah	NM_178185|Hist1h2ap|319171|histone cluster 1, H2ap
mm9_v1_chr13_+_73901101_73901259	0.187824	BPTF.p2	AK171498|Slc12a7|20499|solute carrier family 12, member 7	AF087436|Slc12a7|20499|solute carrier family 12, member 7	NM_011390|Slc12a7|20499|solute carrier family 12, member 7	BC059242|Slc12a7|20499|solute carrier family 12, member 7	BC060133|Slc12a7|20499|solute carrier family 12, member 7	AK143535|Slc12a7|20499|solute carrier family 12, member 7	AK149750|Slc12a7|20499|solute carrier family 12, member 7	AK166215|Slc12a7|20499|solute carrier family 12, member 7	AK169950|Slc12a7|20499|solute carrier family 12, member 7	BC051558|Slc12a7|20499|solute carrier family 12, member 7	BC053470|Slc12a7|20499|solute carrier family 12, member 7	BC141107|Slc12a7|20499|solute carrier family 12, member 7	AK083598|Slc12a7|20499|solute carrier family 12, member 7	BC079677|Slc12a7|20499|solute carrier family 12, member 7	AK131129|Slc12a7|20499|solute carrier family 12, member 7
mm9_v1_chr14_+_15179435_15179644	0.187225	BPTF.p2	BC077736|Il3ra|16188|interleukin 3 receptor, alpha chain	FJ550346|Il3ra|16188|interleukin 3 receptor, alpha chain
mm9_v1_chr1_-_37486768_37486947	0.186292	BPTF.p2	AK177444|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK218336|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK018255|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK040907|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK050432|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	BC002137|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK166651|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK169639|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	NM_198006|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene
mm9_v1_chr4_+_24900565_24900565	0.186245	BPTF.p2	AK036257|Gpr63|81006|G protein-coupled receptor 63	NM_030733|Gpr63|81006|G protein-coupled receptor 63
mm9_v1_chr5_-_130214385_130214385	0.186163	BPTF.p2	NM_028826|Sept14|74222|septin 14
mm9_v1_chr14_+_55506625_55506792	0.185224	BPTF.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr18_-_38094995_38095137	0.185195	BPTF.p2	AK140734|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK220466|Diap1|13367|diaphanous homolog 1 (Drosophila)	NM_007858|Diap1|13367|diaphanous homolog 1 (Drosophila)	U96963|Diap1|13367|diaphanous homolog 1 (Drosophila)	BC070412|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK012707|Diap1|13367|diaphanous homolog 1 (Drosophila)
mm9_v1_chr16_-_94592243_94592351	0.184884	BPTF.p2	BC061116|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AK004169|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC096569|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159616|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216306|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr3_-_96024766_96024802	0.184663	BPTF.p2	NM_175662|Hist2h2ac|319176|histone cluster 2, H2ac	BC117094|Hist2h2ac|319176|histone cluster 2, H2ac	BC117096|Hist2h2ac|319176|histone cluster 2, H2ac
mm9_v1_chr9_-_35936363_35936363	0.184614	BPTF.p2	NM_001167587|Gm5916|546123|predicted gene 5916
mm9_v1_chr5_-_5559500_5559542	0.184559	BPTF.p2	NM_153116|Gtpbp10|207704|GTP-binding protein 10 (putative)	BC034507|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK139595|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK160252|Gtpbp10|207704|GTP-binding protein 10 (putative)
mm9_v1_chr9_-_109733967_109734002	0.184512	BPTF.p2	BC024703|3000002C10Rik|378954|glyceraldehyde-3-phosphate dehydrogenase pseudogene
mm9_v1_chr3_-_116317504_116317504	0.184428	BPTF.p2	AK039588|Ccdc76|229780|coiled-coil domain containing 76	NM_030016|Ccdc76|229780|coiled-coil domain containing 76
mm9_v1_chr10_-_43724651_43724651	0.184415	BPTF.p2	NM_172393|Aim1|11630|absent in melanoma 1
mm9_v1_chr11_+_69659873_69659874	0.184205	BPTF.p2	AK075841|Plscr3|70310|phospholipid scramblase 3	NM_001168497|Plscr3|70310|phospholipid scramblase 3
mm9_v1_chr3_+_3508029_3508207	0.18414	BPTF.p2	AK143816|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	NM_013920|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	AJ242626|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	BC125519|Hnf4g|30942|hepatocyte nuclear factor 4, gamma
mm9_v1_chr6_+_41988391_41988406	0.184092	BPTF.p2	BC104305|Sva|20939|seminal vesicle antigen	NM_009299|Sva|20939|seminal vesicle antigen	BC104304|Sva|20939|seminal vesicle antigen	M94179|Sva|20939|seminal vesicle antigen
mm9_v1_chr11_+_4060345_4060409	0.183746	BPTF.p2	NM_026175|Sf3a1|67465|splicing factor 3a, subunit 1	AK051703|Sf3a1|67465|splicing factor 3a, subunit 1	AK030223|Sf3a1|67465|splicing factor 3a, subunit 1	AK004763|Sf3a1|67465|splicing factor 3a, subunit 1	AK160061|Sf3a1|67465|splicing factor 3a, subunit 1	AK134178|Sf3a1|67465|splicing factor 3a, subunit 1	AK029095|Sf3a1|67465|splicing factor 3a, subunit 1	BC029753|Sf3a1|67465|splicing factor 3a, subunit 1	AK028829|Sf3a1|67465|splicing factor 3a, subunit 1
mm9_v1_chr16_+_16870904_16870931	0.183395	BPTF.p2	AB045324|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr3_+_90097269_90097314	0.183146	BPTF.p2	AK041594|Gatad2b|229542|GATA zinc finger domain containing 2B
mm9_v1_chr1_+_173144116_173144124	0.183047	BPTF.p2	AK149430|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr10_-_79568856_79568857	0.18298	BPTF.p2	AJ512611|Sbno2|216161|strawberry notch homolog 2 (Drosophila)
mm9_v1_chr17_+_56098594_56098609	0.182452	BPTF.p2	AK078481|Ccdc94|72886|coiled-coil domain containing 94	AK013533|Ccdc94|72886|coiled-coil domain containing 94	BC031400|Ccdc94|72886|coiled-coil domain containing 94	NM_028381|Ccdc94|72886|coiled-coil domain containing 94
mm9_v1_chr15_+_4677207_4677220	0.182239	BPTF.p2	NM_016704|C6|12274|complement component 6	AF184900|C6|12274|complement component 6	AK041057|C6|12274|complement component 6	BC011251|C6|12274|complement component 6
mm9_v1_chr1_-_84835871_84836168	0.181348	BPTF.p2	AK158807|Trip12|14897|thyroid hormone receptor interactor 12	NM_133975|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr5_+_138721736_138721806	0.181235	BPTF.p2	BC060184|Stag3|50878|stromal antigen 3	NM_016964|Stag3|50878|stromal antigen 3	AK145898|Stag3|50878|stromal antigen 3	AK158240|Stag3|50878|stromal antigen 3	AJ005678|Stag3|50878|stromal antigen 3	BC139010|Stag3|50878|stromal antigen 3	BC139011|Stag3|50878|stromal antigen 3
mm9_v1_chr1_+_182685912_182685968	0.179895	BPTF.p2	AK017899|5830405M20Rik|74749|RIKEN cDNA 5830405M20 gene
mm9_v1_chr14_+_32481114_32481230	0.17954	BPTF.p2	AK189055|Btd|26363|biotinidase
mm9_v1_chr7_-_109907908_109907984	0.179277	BPTF.p2	AK014616|Olfr78|170639|olfactory receptor 78	AK028467|Olfr78|170639|olfactory receptor 78	AK036356|Olfr78|170639|olfactory receptor 78	NM_001168503|Olfr78|170639|olfactory receptor 78	NM_130866|Olfr78|170639|olfactory receptor 78
mm9_v1_chr11_+_100831192_100831209	0.179148	BPTF.p2	AK009381|Ptrf|19285|polymerase I and transcript release factor
mm9_v1_chrX_+_71372802_71372832	0.179065	BPTF.p2	AF190672|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	AK149287|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	NM_008106|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	BC014826|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	AF011389|Opn1mw|14539|opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
mm9_v1_chr15_-_89209682_89209731	0.179028	BPTF.p2	BC087962|Odf3b|70113|outer dense fiber of sperm tails 3B	NM_001013022|Odf3b|70113|outer dense fiber of sperm tails 3B
mm9_v1_chr1_-_25886551_25886551	0.179012	BPTF.p2	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr3_+_152377076_152377079	0.178722	BPTF.p2	AK043033|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	AK046246|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	BC060175|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr8_+_61390551_61390637	0.178704	BPTF.p2	BC030500|BC030500|234290|cDNA sequence BC030500	NM_173411|BC030500|234290|cDNA sequence BC030500
mm9_v1_chr11_+_100484226_100484324	0.17849	BPTF.p2	AK083475|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK169878|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK010371|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK052645|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	NM_028024|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK149696|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2
mm9_v1_chr5_-_121245511_121245538	0.178061	BPTF.p2	AY055830|Oas1e|231699|2'-5' oligoadenylate synthetase 1E	AY055831|Oas1e|231699|2'-5' oligoadenylate synthetase 1E	AB067531|Oas1e|231699|2'-5' oligoadenylate synthetase 1E	BC053721|Oas1e|231699|2'-5' oligoadenylate synthetase 1E	BC094918|Oas1e|231699|2'-5' oligoadenylate synthetase 1E	BC108956|Oas1e|231699|2'-5' oligoadenylate synthetase 1E	AK087823|Oas1e|231699|2'-5' oligoadenylate synthetase 1E	NM_145210|Oas1e|231699|2'-5' oligoadenylate synthetase 1E
mm9_v1_chr11_+_101037415_101037470	0.178054	BPTF.p2	AF039833|Cntnap1|53321|contactin associated protein-like 1	NM_016782|Cntnap1|53321|contactin associated protein-like 1
mm9_v1_chr3_+_126066744_126066789	0.177993	BPTF.p2	AK034584|Arsj|271970|arylsulfatase J	AK034454|Arsj|271970|arylsulfatase J	NM_173451|Arsj|271970|arylsulfatase J	AK046410|Arsj|271970|arylsulfatase J	AK052931|Arsj|271970|arylsulfatase J
mm9_v1_chr8_+_97125835_97125965	0.177958	BPTF.p2	NM_026274|Rspry1|67610|ring finger and SPRY domain containing 1	BC054121|Rspry1|67610|ring finger and SPRY domain containing 1	AK150941|Rspry1|67610|ring finger and SPRY domain containing 1	AK152435|Rspry1|67610|ring finger and SPRY domain containing 1	AK172461|Rspry1|67610|ring finger and SPRY domain containing 1	AK166167|Rspry1|67610|ring finger and SPRY domain containing 1	AK151018|Rspry1|67610|ring finger and SPRY domain containing 1	AK152024|Rspry1|67610|ring finger and SPRY domain containing 1	AK156697|Rspry1|67610|ring finger and SPRY domain containing 1	AK146028|Rspry1|67610|ring finger and SPRY domain containing 1	AK172567|Rspry1|67610|ring finger and SPRY domain containing 1	AK032416|Rspry1|67610|ring finger and SPRY domain containing 1	AK141443|Rspry1|67610|ring finger and SPRY domain containing 1
mm9_v1_chr9_+_3404047_3404117	0.177815	BPTF.p2	BC125483|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC125485|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK083386|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK045423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	NM_027545|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK014327|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK031423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC100536|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC051218|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC043480|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)
mm9_v1_chr9_+_64083007_64083016	0.177776	BPTF.p2	AB035420|Uchl4|93841|ubiquitin carboxyl-terminal esterase L4	NM_033607|Uchl4|93841|ubiquitin carboxyl-terminal esterase L4	BC139440|Uchl4|93841|ubiquitin carboxyl-terminal esterase L4	BC139441|Uchl4|93841|ubiquitin carboxyl-terminal esterase L4
mm9_v1_chr1_-_181682859_181682906	0.177088	BPTF.p2	AK016646|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr2_+_91551067_91551117	0.17697	BPTF.p2	AK147045|Harbi1|241547|harbinger transposase derived 1	AK084226|Harbi1|241547|harbinger transposase derived 1	AK080671|Harbi1|241547|harbinger transposase derived 1	BC094315|Harbi1|241547|harbinger transposase derived 1	NM_178724|Harbi1|241547|harbinger transposase derived 1	AK045343|Harbi1|241547|harbinger transposase derived 1
mm9_v1_chr16_-_95078278_95078296	0.176164	BPTF.p2	AB029502|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6	U51126|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6	AK015481|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6	NM_001025590|Kcnj6|16522|potassium inwardly-rectifying channel, subfamily J, member 6
mm9_v1_chr8_+_28479182_28479253	0.176162	BPTF.p2	AK030464|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	NM_027454|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	NM_173212|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	AK133689|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3	AK017571|Chrnb3|108043|cholinergic receptor, nicotinic, beta polypeptide 3
mm9_v1_chr13_-_29043539_29043562	0.175948	BPTF.p2	AK031394|Sox4|20677|SRY-box containing gene 4	AK153771|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr6_+_120314442_120314515	0.175889	BPTF.p2	BC080691|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK133589|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK154025|Kdm5a|214899|lysine (K)-specific demethylase 5A	BC010717|Kdm5a|214899|lysine (K)-specific demethylase 5A
mm9_v1_chrX_-_34650263_34650340	0.175873	BPTF.p2	AK019989|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC058761|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK162222|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK011606|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK145431|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	NM_026573|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117769|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117770|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm9_v1_chr5_+_137170046_137170046	0.175807	BPTF.p2	NM_001085387|Myl10|59310|myosin, light chain 10, regulatory	X65979|Myl10|59310|myosin, light chain 10, regulatory
mm9_v1_chr15_-_97536204_97536244	0.175699	BPTF.p2	AK169097|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr12_+_106801381_106801438	0.175588	BPTF.p2	NM_009747|Bdkrb2|12062|bradykinin receptor, beta 2	X78438|Bdkrb2|12062|bradykinin receptor, beta 2	X69682|Bdkrb2|12062|bradykinin receptor, beta 2	AK132469|Bdkrb2|12062|bradykinin receptor, beta 2	BC137755|Bdkrb2|12062|bradykinin receptor, beta 2	BC137756|Bdkrb2|12062|bradykinin receptor, beta 2
mm9_v1_chr6_+_124254668_124254724	0.17557	BPTF.p2	NM_001170395|Cd163|93671|CD163 antigen	NM_053094|Cd163|93671|CD163 antigen	AF274883|Cd163|93671|CD163 antigen	BC144848|Cd163|93671|CD163 antigen	BC145793|Cd163|93671|CD163 antigen	DQ058616|Cd163|93671|CD163 antigen	DQ058617|Cd163|93671|CD163 antigen
mm9_v1_chr16_-_50432421_50432504	0.175513	BPTF.p2	AK044855|Bbx|70508|bobby sox homolog (Drosophila)	BC019456|Bbx|70508|bobby sox homolog (Drosophila)	BC066821|Bbx|70508|bobby sox homolog (Drosophila)	AF276951|Bbx|70508|bobby sox homolog (Drosophila)	BC064763|Bbx|70508|bobby sox homolog (Drosophila)	BC057869|Bbx|70508|bobby sox homolog (Drosophila)	AK157813|Bbx|70508|bobby sox homolog (Drosophila)	AK049516|Bbx|70508|bobby sox homolog (Drosophila)	AF454943|Bbx|70508|bobby sox homolog (Drosophila)	AK017487|Bbx|70508|bobby sox homolog (Drosophila)	AK029747|Bbx|70508|bobby sox homolog (Drosophila)	AK167724|Bbx|70508|bobby sox homolog (Drosophila)	NM_027444|Bbx|70508|bobby sox homolog (Drosophila)
mm9_v1_chr16_+_37011839_37011930	0.17541	BPTF.p2	AY074936|Polq|77782|polymerase (DNA directed), theta	AY147862|Polq|77782|polymerase (DNA directed), theta	AY147863|Polq|77782|polymerase (DNA directed), theta	AY147864|Polq|77782|polymerase (DNA directed), theta	NM_001159369|Polq|77782|polymerase (DNA directed), theta	NM_029977|Polq|77782|polymerase (DNA directed), theta	AK020790|Polq|77782|polymerase (DNA directed), theta	BC138360|Polq|77782|polymerase (DNA directed), theta	BC157900|Polq|77782|polymerase (DNA directed), theta
mm9_v1_chr5_-_110537215_110537219	0.1754	BPTF.p2	AK144812|Gtpbp6|107999|GTP binding protein 6 (putative)	AK152225|Gtpbp6|107999|GTP binding protein 6 (putative)	AK152972|Gtpbp6|107999|GTP binding protein 6 (putative)	NM_145147|Gtpbp6|107999|GTP binding protein 6 (putative)
mm9_v1_chr3_-_88288055_88288076	0.17521	BPTF.p2	AK003174|Lmna|16905|lamin A	AK210233|Lmna|16905|lamin A
mm9_v1_chr5_-_46030523_46030852	0.174815	BPTF.p2	AK081567|Fam184b|58227|family with sequence similarity 184, member B	BC056379|Fam184b|58227|family with sequence similarity 184, member B	NM_021416|Fam184b|58227|family with sequence similarity 184, member B	AB257856|Fam184b|58227|family with sequence similarity 184, member B
mm9_v1_chr13_+_27893522_27893571	0.174791	BPTF.p2	AB032428|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF234636|Prl2a1|56635|prolactin family 2, subfamily a, member 1	NM_019991|Prl2a1|56635|prolactin family 2, subfamily a, member 1	BC099458|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AK005424|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF226610|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF272368|Prl2a1|56635|prolactin family 2, subfamily a, member 1
mm9_v1_chr6_+_64679118_64679139	0.174607	BPTF.p2	AK082354|Atoh1|11921|atonal homolog 1 (Drosophila)	BC010820|Atoh1|11921|atonal homolog 1 (Drosophila)	NM_007500|Atoh1|11921|atonal homolog 1 (Drosophila)
mm9_v1_chrX_+_154137193_154137229	0.173761	BPTF.p2	BC132358|Smpx|66106|small muscle protein, X-linked	BC138801|Smpx|66106|small muscle protein, X-linked
mm9_v1_chr14_+_70167278_70167338	0.173637	BPTF.p2	AK050753|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	NM_020275|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK080069|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK145730|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK154993|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	BC065141|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AB031081|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr4_-_11181373_11181380	0.173131	BPTF.p2	AK169552|Ints8|72656|integrator complex subunit 8	AK049513|Ints8|72656|integrator complex subunit 8
mm9_v1_chr10_-_13043959_13044096	0.173045	BPTF.p2	BC130264|Phactr2|215789|phosphatase and actin regulator 2	AK142930|Phactr2|215789|phosphatase and actin regulator 2	NM_001033257|Phactr2|215789|phosphatase and actin regulator 2	NM_001195096|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr13_+_51747065_51747139	0.17294	BPTF.p2	AK156076|Secisbp2|75420|SECIS binding protein 2	BC125391|Secisbp2|75420|SECIS binding protein 2	BC144795|Secisbp2|75420|SECIS binding protein 2	NM_029279|Secisbp2|75420|SECIS binding protein 2	BC125393|Secisbp2|75420|SECIS binding protein 2	AK012732|Secisbp2|75420|SECIS binding protein 2	AK168634|Secisbp2|75420|SECIS binding protein 2	AK037988|Secisbp2|75420|SECIS binding protein 2	AK030021|Secisbp2|75420|SECIS binding protein 2
mm9_v1_chr19_-_44481898_44481917	0.172817	BPTF.p2	CT010171|Scd1|20249|stearoyl-Coenzyme A desaturase 1	CT010332|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr4_-_49519333_49519379	0.172578	BPTF.p2	U95215|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	BC012683|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	AK017923|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase
mm9_v1_chr10_-_127613623_127613661	0.172512	BPTF.p2	NM_019711|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr3_-_89195913_89195990	0.172258	BPTF.p2	AK149976|Zbtb7b|22724|zinc finger and BTB domain containing 7B
mm9_v1_chr12_+_56404272_56404278	0.172197	BPTF.p2	AK172942|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr9_-_105999021_105999113	0.17192	BPTF.p2	AM231151|Col6a4|68553|collagen, type VI, alpha 4	NM_026763|Col6a4|68553|collagen, type VI, alpha 4	AB370265|Col6a4|68553|collagen, type VI, alpha 4
mm9_v1_chr4_-_128866766_128866902	0.171918	BPTF.p2	AK146310|S100pbp|74648|S100P binding protein	AK030636|S100pbp|74648|S100P binding protein	AK046756|S100pbp|74648|S100P binding protein	AK154074|S100pbp|74648|S100P binding protein	AK169364|S100pbp|74648|S100P binding protein	AK139097|S100pbp|74648|S100P binding protein	BC038329|S100pbp|74648|S100P binding protein
mm9_v1_chr17_+_95149439_95149477	0.171347	BPTF.p2	AK132724|2700099C18Rik|77022|NDC80 homolog, kinetochore complex component pseudogene	AK020462|2700099C18Rik|77022|NDC80 homolog, kinetochore complex component pseudogene	AK012623|2700099C18Rik|77022|NDC80 homolog, kinetochore complex component pseudogene	BC002320|2700099C18Rik|77022|NDC80 homolog, kinetochore complex component pseudogene
mm9_v1_chr7_-_22546493_22546493	0.170995	BPTF.p2	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr7_-_23769691_23769691	0.170995	BPTF.p2	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr5_+_147644594_147644770	0.170971	BPTF.p2	AK008457|Rpl21|19933|ribosomal protein L21	AK018480|Rpl21|19933|ribosomal protein L21	BC086905|Rpl21|19933|ribosomal protein L21	BC086935|Rpl21|19933|ribosomal protein L21	AK002940|Rpl21|19933|ribosomal protein L21	BC086904|Rpl21|19933|ribosomal protein L21	BC089582|Rpl21|19933|ribosomal protein L21	AK146440|Rpl21|19933|ribosomal protein L21	BC106116|Rpl21|19933|ribosomal protein L21	BC138299|Rpl21|19933|ribosomal protein L21	BC138300|Rpl21|19933|ribosomal protein L21	BC094410|Rpl21|19933|ribosomal protein L21	BC096404|Rpl21|19933|ribosomal protein L21	U93863|Rpl21|19933|ribosomal protein L21	BC090256|Rpl21|19933|ribosomal protein L21	AK168998|Rpl21|19933|ribosomal protein L21
mm9_v1_chr16_+_31934038_31934067	0.170918	BPTF.p2	AK089183|Pigz|239827|phosphatidylinositol glycan anchor biosynthesis, class Z	AK087516|Pigz|239827|phosphatidylinositol glycan anchor biosynthesis, class Z	AK038701|Pigz|239827|phosphatidylinositol glycan anchor biosynthesis, class Z
mm9_v1_chr7_+_13483153_13483228	0.170728	BPTF.p2	AK052559|Zscan22|232878|zinc finger and SCAN domain containing 22	AK085207|Zscan22|232878|zinc finger and SCAN domain containing 22	NM_001001447|Zscan22|232878|zinc finger and SCAN domain containing 22	AK163694|Zscan22|232878|zinc finger and SCAN domain containing 22	AK078591|Zscan22|232878|zinc finger and SCAN domain containing 22	BC026676|Zscan22|232878|zinc finger and SCAN domain containing 22
mm9_v1_chr2_+_142904128_142904227	0.170289	BPTF.p2	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr11_+_116396053_116396165	0.170197	BPTF.p2	AF068749|Sphk1|20698|sphingosine kinase 1	NM_011451|Sphk1|20698|sphingosine kinase 1	AF415213|Sphk1|20698|sphingosine kinase 1
mm9_v1_chr6_+_64992861_64992872	0.170149	BPTF.p2	AK147884|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr6_-_123483423_123483423	0.16998	BPTF.p2	NM_001104635|Vmn2r21|546912|vomeronasal 2, receptor 21
mm9_v1_chr16_+_10170320_10170392	0.169289	BPTF.p2	AK019681|Rpl39l|68172|ribosomal protein L39-like	NM_026594|Rpl39l|68172|ribosomal protein L39-like	AK005645|Rpl39l|68172|ribosomal protein L39-like	BC023885|Rpl39l|68172|ribosomal protein L39-like	BC051469|Rpl39l|68172|ribosomal protein L39-like
mm9_v1_chrX_-_146875621_146875705	0.169006	BPTF.p2	BC058428|Tmem29|382245|transmembrane protein 29	AK018228|Tmem29|382245|transmembrane protein 29	NM_001164684|Tmem29|382245|transmembrane protein 29	AK165152|Tmem29|382245|transmembrane protein 29
mm9_v1_chr7_+_48888946_48888970	0.168994	BPTF.p2	AK163311|Zfp788|67607|zinc finger protein 788
mm9_v1_chr2_-_35252576_35252694	0.168871	BPTF.p2	BC115676|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene	BC115677|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene	AK015047|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene	NM_001080709|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene
mm9_v1_chr1_+_111880313_111880391	0.168837	BPTF.p2	AK034096|Cdh7|241201|cadherin 7, type 2	NM_172853|Cdh7|241201|cadherin 7, type 2	AK137369|Cdh7|241201|cadherin 7, type 2
mm9_v1_chr4_-_131628011_131628011	0.168824	BPTF.p2	L00919|Epb4.1|269587|erythrocyte protein band 4.1	NM_183428|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr1_-_122401329_122401342	0.168561	BPTF.p2	AK156388|Marco|17167|macrophage receptor with collagenous structure	AK169230|Marco|17167|macrophage receptor with collagenous structure	AK159967|Marco|17167|macrophage receptor with collagenous structure
mm9_v1_chr12_+_72212414_72212430	0.168368	BPTF.p2	BC048520|Tomm20l|75266|translocase of outer mitochondrial membrane 20 homolog (yeast)-like	NM_029227|Tomm20l|75266|translocase of outer mitochondrial membrane 20 homolog (yeast)-like	AK016101|Tomm20l|75266|translocase of outer mitochondrial membrane 20 homolog (yeast)-like
mm9_v1_chr1_+_83156336_83156343	0.168356	BPTF.p2	AK016977|Wdr69|71227|WD repeat domain 69	BC049704|Wdr69|71227|WD repeat domain 69	BC144994|Wdr69|71227|WD repeat domain 69	BC145995|Wdr69|71227|WD repeat domain 69	NM_027725|Wdr69|71227|WD repeat domain 69	AK016201|Wdr69|71227|WD repeat domain 69
mm9_v1_chr10_+_110917672_110917672	0.168292	BPTF.p2	AK050375|Nap1l1|53605|nucleosome assembly protein 1-like 1	NM_001146707|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr4_+_128964928_128964982	0.168277	BPTF.p2	AJ251641|Sync|68828|syncoilin	BC106855|Sync|68828|syncoilin	FJ752162|Sync|68828|syncoilin	FJ752163|Sync|68828|syncoilin	FJ752164|Sync|68828|syncoilin
mm9_v1_chr16_-_19706433_19706494	0.167952	BPTF.p2	NM_177356|Lamp3|239739|lysosomal-associated membrane protein 3
mm9_v1_chr5_+_91503642_91503677	0.167404	BPTF.p2	NM_007950|Ereg|13874|epiregulin	D30782|Ereg|13874|epiregulin	BC027838|Ereg|13874|epiregulin
mm9_v1_chr14_+_52504516_52504626	0.167279	BPTF.p2	NM_001029990|Mett11d1|52535|methyltransferase 11 domain containing 1	AK156895|Mett11d1|52535|methyltransferase 11 domain containing 1	AK172330|Mett11d1|52535|methyltransferase 11 domain containing 1	BC138944|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145472|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145473|Mett11d1|52535|methyltransferase 11 domain containing 1	BC145474|Mett11d1|52535|methyltransferase 11 domain containing 1	AK087101|Mett11d1|52535|methyltransferase 11 domain containing 1	AK155096|Mett11d1|52535|methyltransferase 11 domain containing 1	AK009576|Mett11d1|52535|methyltransferase 11 domain containing 1	AK032357|Mett11d1|52535|methyltransferase 11 domain containing 1
mm9_v1_chrX_+_63906333_63906333	0.167069	BPTF.p2	BC111888|Slitrk2|245450|SLIT and NTRK-like family, member 2	BC112406|Slitrk2|245450|SLIT and NTRK-like family, member 2	NM_198863|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr11_+_97258202_97258205	0.167017	BPTF.p2	AK138734|Socs7|192157|suppressor of cytokine signaling 7
mm9_v1_chr9_-_37538645_37538688	0.166224	BPTF.p2	BC138117|Olfr151|406176|olfactory receptor 151	BC138118|Olfr151|406176|olfactory receptor 151	NM_207664|Olfr151|406176|olfactory receptor 151	AY245537|Olfr151|406176|olfactory receptor 151
mm9_v1_chr16_-_88869611_88869654	0.16559	BPTF.p2	AF345292|Krtap16-2|170652|keratin associated protein 16-2	AF345299|Krtap16-9|170657|keratin associated protein 16-9	NM_130876|Krtap16-9|170657|keratin associated protein 16-9
mm9_v1_chr6_-_40850379_40850385	0.165449	BPTF.p2	BC048599|BC048599|232717|cDNA sequence BC048599	AK075754|BC048599|232717|cDNA sequence BC048599	NM_175020|BC048599|232717|cDNA sequence BC048599
mm9_v1_chr1_-_89283173_89283296	0.165236	BPTF.p2	
mm9_v1_chr4_+_137773173_137773219	0.165196	BPTF.p2	AK169740|Hp1bp3|15441|heterochromatin protein 1, binding protein 3	AK161084|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr5_+_106129819_106129884	0.165133	BPTF.p2	AK158262|Lrrc8d|231549|leucine rich repeat containing 8D	NM_178701|Lrrc8d|231549|leucine rich repeat containing 8D	BC037717|Lrrc8d|231549|leucine rich repeat containing 8D	AK050400|Lrrc8d|231549|leucine rich repeat containing 8D	AK170452|Lrrc8d|231549|leucine rich repeat containing 8D
mm9_v1_chr17_+_71554015_71554025	0.164938	BPTF.p2	BC039698|Lpin2|64898|lipin 2
mm9_v1_chr1_-_89291303_89291307	0.164858	BPTF.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr8_+_86618736_86618846	0.164753	BPTF.p2	
mm9_v1_chr2_+_69877182_69877182	0.164065	BPTF.p2	NM_177376|Myo3b|329421|myosin IIIB
mm9_v1_chr4_-_129318200_129318260	0.163945	BPTF.p2	AK141252|Txlna|109658|taxilin alpha
mm9_v1_chr14_+_18814157_18814390	0.163641	BPTF.p2	BC089035|Thrb|21834|thyroid hormone receptor beta	NM_009380|Thrb|21834|thyroid hormone receptor beta	BC119553|Thrb|21834|thyroid hormone receptor beta	BC119552|Thrb|21834|thyroid hormone receptor beta	S62758|Thrb|21834|thyroid hormone receptor beta	AB221613|Thrb|21834|thyroid hormone receptor beta
mm9_v1_chr13_+_108834624_108834692	0.163503	BPTF.p2	BC069965|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene	AK088529|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene	AK139507|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene	NM_001048250|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene
mm9_v1_chr4_-_118081793_118081882	0.163067	BPTF.p2	GU433214|Szt2|230676|seizure threshold 2	FJ998170|Szt2|230676|seizure threshold 2	NM_198170|Szt2|230676|seizure threshold 2
mm9_v1_chr15_-_9678531_9678622	0.163052	BPTF.p2	AK041992|Spef2|320277|sperm flagellar 2	BC132098|Spef2|320277|sperm flagellar 2	BC132288|Spef2|320277|sperm flagellar 2	NM_177123|Spef2|320277|sperm flagellar 2	AK048961|Spef2|320277|sperm flagellar 2
mm9_v1_chr10_-_128240935_128241048	0.163011	BPTF.p2	AK207701|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene	AK054166|1110012D08Rik|73827|RIKEN cDNA 1110012D08 gene
mm9_v1_chr17_+_6806387_6806526	0.162649	BPTF.p2	NM_001166627|Dynlt1f|100040531|dynein light chain Tctex-type 1F	AK168478|Dynlt1c|100040563|dynein light chain Tctex-type 1C	NM_001166630|Dynlt1c|100040563|dynein light chain Tctex-type 1C	M25825|Dynlt1b|21648|dynein light chain Tctex-type 1D	EF110999|Dynlt1c|100040563|dynein light chain Tctex-type 1C
mm9_v1_chr18_+_13165498_13165545	0.162456	BPTF.p2	AF358859|Hrh4|225192|histamine receptor H4	NM_153087|Hrh4|225192|histamine receptor H4	BC111862|Hrh4|225192|histamine receptor H4	EU660535|Hrh4|225192|histamine receptor H4	EU660534|Hrh4|225192|histamine receptor H4
mm9_v1_chr15_-_83082156_83082203	0.162124	BPTF.p2	AK149186|A4galt|239559|alpha 1,4-galactosyltransferase	AK162529|A4galt|239559|alpha 1,4-galactosyltransferase	AY371179|A4galt|239559|alpha 1,4-galactosyltransferase	NM_001170954|A4galt|239559|alpha 1,4-galactosyltransferase	AK139833|A4galt|239559|alpha 1,4-galactosyltransferase	NM_001004150|A4galt|239559|alpha 1,4-galactosyltransferase
mm9_v1_chr7_-_147222263_147222306	0.162016	BPTF.p2	AK158060|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK033157|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK045084|Tubgcp2|74237|tubulin, gamma complex associated protein 2
mm9_v1_chr6_-_129628927_129628990	0.161676	BPTF.p2	AF095447|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF109782|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF109783|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF109784|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	NM_001136068|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	NM_010652|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF106009|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AK138801|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	AF106008|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	BC145003|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1	BC145694|Klrc1|16641|killer cell lectin-like receptor subfamily C, member 1
mm9_v1_chr4_-_62069611_62069739	0.161617	BPTF.p2	AK012627|Cdc26|66440|cell division cycle 26	NM_139291|Cdc26|66440|cell division cycle 26	AK135556|Cdc26|66440|cell division cycle 26	AK047055|Cdc26|66440|cell division cycle 26
mm9_v1_chr16_-_55974685_55974705	0.161557	BPTF.p2	AK010004|2310061J03Rik|66391|RIKEN cDNA 2310061J03 gene
mm9_v1_chr4_+_137773045_137773112	0.161248	BPTF.p2	NM_001122897|Hp1bp3|15441|heterochromatin protein 1, binding protein 3
mm9_v1_chr6_+_86321479_86321568	0.161223	BPTF.p2	BC051470|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G	AK013235|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G	NM_026506|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G	AK011129|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G	AK012802|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G	BC094411|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G	BC027499|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G	AK017852|Snrpg|68011|small nuclear ribonucleoprotein polypeptide G
mm9_v1_chr2_+_22924699_22924786	0.160645	BPTF.p2	BC084584|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr2_+_28980667_28980703	0.16046	BPTF.p2	AK168809|Setx|269254|senataxin
mm9_v1_chr13_+_36209724_36209798	0.160306	BPTF.p2	AK020164|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK170986|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK076259|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK054370|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	BC002147|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK013211|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr17_-_27076365_27076517	0.160289	BPTF.p2	AK007580|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK007912|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK145185|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC024422|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC028531|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	NM_026307|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK003381|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	NM_026948|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK003647|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK004197|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK159336|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK002828|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK012608|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr15_+_99869071_99869185	0.16003	BPTF.p2	NM_001159361|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	AK147562|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm9_v1_chr5_+_92984113_92984113	0.160017	BPTF.p2	NM_001170572|Fam47e|384198|family with sequence similarity 47, member E
mm9_v1_chr7_+_26846512_26846528	0.15977	BPTF.p2	NM_007813|Cyp2b13|13089|cytochrome P450, family 2, subfamily b, polypeptide 13	BC145895|Cyp2b13|13089|cytochrome P450, family 2, subfamily b, polypeptide 13
mm9_v1_chr6_-_52177368_52177368	0.159093	BPTF.p2	AB005457|Hoxa9|15405|homeobox A9	NM_010456|Hoxa9|15405|homeobox A9
mm9_v1_chr7_+_24443334_24443439	0.158934	BPTF.p2	AF324873|Vmn1r172|81010|vomeronasal 1 receptor 172	NM_030735|Vmn1r172|81010|vomeronasal 1 receptor 172	BC139316|Vmn1r172|81010|vomeronasal 1 receptor 172	BC139317|Vmn1r172|81010|vomeronasal 1 receptor 172	BC145601|Vmn1r172|81010|vomeronasal 1 receptor 172
mm9_v1_chr11_+_46337752_46337752	0.158918	BPTF.p2	NM_001163357|Gm12169|210535|predicted gene 12169
mm9_v1_chr5_+_91456489_91456542	0.158853	BPTF.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr5_+_121262643_121262689	0.158684	BPTF.p2	AB067529|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF328926|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418004|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418005|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418006|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418007|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418008|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF418009|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	NM_001083925|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AK080152|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	BC012877|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF466822|Oas1b|23961|2'-5' oligoadenylate synthetase 1B	AF466823|Oas1b|23961|2'-5' oligoadenylate synthetase 1B
mm9_v1_chr1_+_7079042_7079277	0.158537	BPTF.p2	AK079468|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK166166|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK168705|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	BC110360|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK134223|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK168606|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	BC019193|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK187882|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK040848|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK145008|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK166593|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr5_+_88095232_88095257	0.158078	BPTF.p2	AK052808|Csn1s1|12990|casein alpha s1	AK085690|Csn1s1|12990|casein alpha s1	BC003859|Csn1s1|12990|casein alpha s1	BC006024|Csn1s1|12990|casein alpha s1	BC007192|Csn1s1|12990|casein alpha s1	BC008278|Csn1s1|12990|casein alpha s1	BC040246|Csn1s1|12990|casein alpha s1	NM_007784|Csn1s1|12990|casein alpha s1	BC002101|Csn1s1|12990|casein alpha s1
mm9_v1_chr19_-_15980291_15980379	0.157951	BPTF.p2	AK191308|Psat1|107272|phosphoserine aminotransferase 1	AK177700|Psat1|107272|phosphoserine aminotransferase 1
mm9_v1_chr10_+_80165035_80165051	0.157876	BPTF.p2	AK018541|Izumo4|71564|IZUMO family member 4
mm9_v1_chr10_-_85474581_85474639	0.157662	BPTF.p2	BC112376|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	AK028764|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	NM_177772|Bpil2|270757|bactericidal/permeability-increasing protein-like 2	AK132518|Bpil2|270757|bactericidal/permeability-increasing protein-like 2
mm9_v1_chr13_-_61304752_61304770	0.157453	BPTF.p2	AF223401|Cts6|58518|cathepsin 6	NM_021445|Cts6|58518|cathepsin 6	BC099455|Cts6|58518|cathepsin 6	AY014781|Cts6|58518|cathepsin 6	AK005518|Cts6|58518|cathepsin 6
mm9_v1_chr4_+_140924106_140924134	0.157435	BPTF.p2	BC147048|Fam131c|277743|family with sequence similarity 131, member C	BC147049|Fam131c|277743|family with sequence similarity 131, member C	NM_001085513|Fam131c|277743|family with sequence similarity 131, member C
mm9_v1_chr7_-_7252221_7252267	0.157264	BPTF.p2	BC110668|Clcn4-2|12727|chloride channel 4-2	NM_011334|Clcn4-2|12727|chloride channel 4-2	BC089497|Clcn4-2|12727|chloride channel 4-2
mm9_v1_chr9_-_40792541_40792554	0.156732	BPTF.p2	AK163744|Crtam|54698|cytotoxic and regulatory T cell molecule
mm9_v1_chr12_+_56499761_56499884	0.156119	BPTF.p2	NM_011968|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK152915|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK088143|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK161662|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	U60288|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	BC086685|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr10_-_30338265_30338290	0.155673	BPTF.p2	AK002482|Hint3|66847|histidine triad nucleotide binding protein 3
mm9_v1_chr2_+_140221165_140221195	0.155528	BPTF.p2	AK134694|Macrod2|72899|MACRO domain containing 2	NM_001013802|Macrod2|72899|MACRO domain containing 2	AK013491|Macrod2|72899|MACRO domain containing 2	NM_028387|Macrod2|72899|MACRO domain containing 2	AK011824|Macrod2|72899|MACRO domain containing 2	AK165589|Macrod2|72899|MACRO domain containing 2	AK029184|Macrod2|72899|MACRO domain containing 2	AK160433|Macrod2|72899|MACRO domain containing 2	AK004072|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr19_+_46576230_46576286	0.155303	BPTF.p2	BC082298|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr15_+_79921725_79921855	0.154935	BPTF.p2	BC138728|Syngr1|20972|synaptogyrin 1	BC138729|Syngr1|20972|synaptogyrin 1	NM_009303|Syngr1|20972|synaptogyrin 1	NM_207708|Syngr1|20972|synaptogyrin 1	AK044007|Syngr1|20972|synaptogyrin 1	AJ002306|Syngr1|20972|synaptogyrin 1	AK156134|Syngr1|20972|synaptogyrin 1	AK002972|Syngr1|20972|synaptogyrin 1	AK010442|Syngr1|20972|synaptogyrin 1	AK153096|Syngr1|20972|synaptogyrin 1	AK153187|Syngr1|20972|synaptogyrin 1	BC048172|Syngr1|20972|synaptogyrin 1	AK194549|Syngr1|20972|synaptogyrin 1
mm9_v1_chr6_+_83106397_83106458	0.154803	BPTF.p2	NM_027948|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene	AK005628|1700003E16Rik|71837|RIKEN cDNA 1700003E16 gene
mm9_v1_chr4_+_102664399_102664426	0.154612	BPTF.p2	NM_001163768|Tctex1d1|67344|Tctex1 domain containing 1	AK040270|Tctex1d1|67344|Tctex1 domain containing 1
mm9_v1_chr16_+_33056538_33056630	0.154572	BPTF.p2	NM_001130485|Rpl35a|57808|ribosomal protein L35A	AK046386|Rpl35a|57808|ribosomal protein L35A	AK160963|Rpl35a|57808|ribosomal protein L35A	NM_001130484|Rpl35a|57808|ribosomal protein L35A	AK028214|Rpl35a|57808|ribosomal protein L35A	AK003063|Rpl35a|57808|ribosomal protein L35A	BC100599|Rpl35a|57808|ribosomal protein L35A	AK010692|Rpl35a|57808|ribosomal protein L35A	BC086771|Rpl35a|57808|ribosomal protein L35A	BC090255|Rpl35a|57808|ribosomal protein L35A	NM_021338|Rpl35a|57808|ribosomal protein L35A	BC027223|Rpl35a|57808|ribosomal protein L35A
mm9_v1_chr17_+_19499098_19499098	0.154543	BPTF.p2	NM_001104551|Vmn2r99|665376|vomeronasal 2, receptor 99
mm9_v1_chr13_+_23830671_23830686	0.154326	BPTF.p2	AK155502|Hist1h1c|50708|histone cluster 1, H1c	BC089604|Hist1h1c|50708|histone cluster 1, H1c	NM_015786|Hist1h1c|50708|histone cluster 1, H1c	AK002321|Hist1h1c|50708|histone cluster 1, H1c
mm9_v1_chr8_-_86265035_86265224	0.154293	BPTF.p2	CT010326|Cd97|26364|CD97 antigen	AF146344|Cd97|26364|CD97 antigen	Y18365|Cd97|26364|CD97 antigen	BC006676|Cd97|26364|CD97 antigen	NM_001163029|Cd97|26364|CD97 antigen	NM_001163030|Cd97|26364|CD97 antigen	NM_001163031|Cd97|26364|CD97 antigen	NM_011925|Cd97|26364|CD97 antigen	AK004577|Cd97|26364|CD97 antigen
mm9_v1_chr17_-_56273265_56273275	0.153849	BPTF.p2	AK166077|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	NM_013662|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm9_v1_chr19_-_5801766_5801972	0.153832	BPTF.p2	BC094333|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC039749|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	BC004722|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr17_+_8437922_8437922	0.153545	BPTF.p2	AK154413|Ccr6|12458|chemokine (C-C motif) receptor 6	NM_001190338|Ccr6|12458|chemokine (C-C motif) receptor 6
mm9_v1_chr17_-_15701291_15701303	0.153491	BPTF.p2	BC012016|Prdm9|213389|PR domain containing 9	BC049903|Prdm9|213389|PR domain containing 9
mm9_v1_chr19_+_53977901_53977958	0.153482	BPTF.p2	BC055739|Pdcd4|18569|programmed cell death 4	D86344|Pdcd4|18569|programmed cell death 4
mm9_v1_chr15_+_97998090_97998244	0.153468	BPTF.p2	AK080988|AI836003|239650|expressed sequence AI836003	NM_177716|AI836003|239650|expressed sequence AI836003
mm9_v1_chr3_+_138190223_138190257	0.153329	BPTF.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr15_+_76709688_76709760	0.153258	BPTF.p2	BC011501|Zfp7|223669|zinc finger protein 7	NM_145916|Zfp7|223669|zinc finger protein 7	AK144887|Zfp7|223669|zinc finger protein 7	AK038299|Zfp7|223669|zinc finger protein 7	AK143414|Zfp7|223669|zinc finger protein 7	AK168948|Zfp7|223669|zinc finger protein 7	BC062103|Zfp7|223669|zinc finger protein 7
mm9_v1_chr7_+_49515422_49515422	0.153226	BPTF.p2	NM_001105058|Vmn2r61|637873|vomeronasal 2, receptor 61
mm9_v1_chr11_+_95995099_95995099	0.15296	BPTF.p2	AM690749|Ttll6|237930|tubulin tyrosine ligase-like family, member 6	NM_172799|Ttll6|237930|tubulin tyrosine ligase-like family, member 6
mm9_v1_chr11_-_86398586_86398610	0.152743	BPTF.p2	AK219497|Tmem49|75909|transmembrane protein 49	AK180953|Tmem49|75909|transmembrane protein 49
mm9_v1_chrX_+_4446526_4446526	0.152569	BPTF.p2	NM_001099643|Gm3750|100042254|predicted gene 3750
mm9_v1_chr7_+_19425314_19425337	0.152534	BPTF.p2	AB086266|Mill2|243864|MHC I like leukocyte 2	AB086267|Mill2|243864|MHC I like leukocyte 2	NM_153760|Mill2|243864|MHC I like leukocyte 2	NM_153761|Mill2|243864|MHC I like leukocyte 2	BC137748|Mill2|243864|MHC I like leukocyte 2	BC144886|Mill2|243864|MHC I like leukocyte 2	AK137167|Mill2|243864|MHC I like leukocyte 2
mm9_v1_chr13_-_61265507_61265616	0.152081	BPTF.p2	AY014778|Ctsr|56835|cathepsin R	BC100338|Ctsr|56835|cathepsin R	AF245399|Ctsr|56835|cathepsin R	NM_020284|Ctsr|56835|cathepsin R	AK014432|Ctsr|56835|cathepsin R	AK005429|Ctsr|56835|cathepsin R	AY943668|Ctsr|56835|cathepsin R
mm9_v1_chr13_+_41096358_41096399	0.15188	BPTF.p2	NM_026550|Pak1ip1|68083|PAK1 interacting protein 1	AK077846|Pak1ip1|68083|PAK1 interacting protein 1	AF386076|Pak1ip1|68083|PAK1 interacting protein 1	AK017959|Pak1ip1|68083|PAK1 interacting protein 1
mm9_v1_chr3_-_89018256_89018256	0.151725	BPTF.p2	NM_001161824|Mtx1|17827|metaxin 1	NM_013604|Mtx1|17827|metaxin 1
mm9_v1_chr12_+_12268901_12269011	0.151539	BPTF.p2	NM_001146119|Fam49a|76820|family with sequence similarity 49, member A	NM_029758|Fam49a|76820|family with sequence similarity 49, member A	AK047142|Fam49a|76820|family with sequence similarity 49, member A	BC049664|Fam49a|76820|family with sequence similarity 49, member A
mm9_v1_chr7_+_147129687_147129754	0.151517	BPTF.p2	AK131968|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AK010589|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AY606111|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AK010280|Utf1|22286|undifferentiated embryonic cell transcription factor 1	BC138841|Utf1|22286|undifferentiated embryonic cell transcription factor 1	BC138842|Utf1|22286|undifferentiated embryonic cell transcription factor 1	D31647|Utf1|22286|undifferentiated embryonic cell transcription factor 1	NM_009482|Utf1|22286|undifferentiated embryonic cell transcription factor 1
mm9_v1_chr10_+_79612410_79612424	0.151407	BPTF.p2	AK154535|Midn|59090|midnolin
mm9_v1_chr8_-_23763885_23763908	0.151209	BPTF.p2	AF513911|Polb|18970|polymerase (DNA directed), beta	BC060998|Polb|18970|polymerase (DNA directed), beta	AK077127|Polb|18970|polymerase (DNA directed), beta	AK151436|Polb|18970|polymerase (DNA directed), beta	AK146745|Polb|18970|polymerase (DNA directed), beta	BC006681|Polb|18970|polymerase (DNA directed), beta	NM_011130|Polb|18970|polymerase (DNA directed), beta
mm9_v1_chr1_-_186635045_186635085	0.150993	BPTF.p2	AK011722|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1	AK004989|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr12_+_60232417_60232447	0.150989	BPTF.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr8_+_23303277_23303337	0.150504	BPTF.p2	AK161865|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK008946|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK150754|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK151035|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK156241|Vps36|70160|vacuolar protein sorting 36 (yeast)	BC010811|Vps36|70160|vacuolar protein sorting 36 (yeast)	NM_027338|Vps36|70160|vacuolar protein sorting 36 (yeast)
mm9_v1_chr11_+_104953532_104953539	0.150447	BPTF.p2	NM_001081046|Efcab3|70894|EF-hand calcium binding domain 3	BC050801|Efcab3|70894|EF-hand calcium binding domain 3	AK014861|Efcab3|70894|EF-hand calcium binding domain 3
mm9_v1_chr4_-_94645735_94645794	0.150388	BPTF.p2	AK164103|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK081684|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK145221|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK166402|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC150946|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC151172|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK043802|Mysm1|320713|myb-like, SWIRM and MPN domains 1	NM_177239|Mysm1|320713|myb-like, SWIRM and MPN domains 1
mm9_v1_chr4_-_62131905_62131926	0.150273	BPTF.p2	AF274321|Wdr31|71354|WD repeat domain 31	NM_023597|Wdr31|71354|WD repeat domain 31	BC037102|Wdr31|71354|WD repeat domain 31	AK017259|Wdr31|71354|WD repeat domain 31	AK141026|Wdr31|71354|WD repeat domain 31
mm9_v1_chr8_-_87784612_87784676	0.150081	BPTF.p2	AK219106|Vps35|65114|vacuolar protein sorting 35
mm9_v1_chr5_-_109027924_109027935	0.150029	BPTF.p2	AK034637|Gak|231580|cyclin G associated kinase
mm9_v1_chr2_+_24070936_24071023	0.149846	BPTF.p2	NM_019450|Il1f6|54448|interleukin 1 family, member 6	AK004061|Il1f6|54448|interleukin 1 family, member 6	AK224928|Il1f6|54448|interleukin 1 family, member 6	AK224929|Il1f6|54448|interleukin 1 family, member 6	AK224932|Il1f6|54448|interleukin 1 family, member 6	AK224931|Il1f6|54448|interleukin 1 family, member 6	AF206697|Il1f6|54448|interleukin 1 family, member 6
mm9_v1_chr9_+_106124928_106124996	0.149727	BPTF.p2	AB045181|Tlr9|81897|toll-like receptor 9	NM_031178|Tlr9|81897|toll-like receptor 9	AF314224|Tlr9|81897|toll-like receptor 9	AF348140|Tlr9|81897|toll-like receptor 9
mm9_v1_chr19_-_21547072_21547150	0.149697	BPTF.p2	AF174583|Gda|14544|guanine deaminase	AK044078|Gda|14544|guanine deaminase	AK173138|Gda|14544|guanine deaminase	AK041056|Gda|14544|guanine deaminase	AK079459|Gda|14544|guanine deaminase	AK157014|Gda|14544|guanine deaminase	NM_010266|Gda|14544|guanine deaminase
mm9_v1_chr13_+_91881065_91881204	0.149481	BPTF.p2	AK034622|Acot12|74156|acyl-CoA thioesterase 12	AK004905|Acot12|74156|acyl-CoA thioesterase 12	AK033663|Acot12|74156|acyl-CoA thioesterase 12	NM_028790|Acot12|74156|acyl-CoA thioesterase 12	AB078618|Acot12|74156|acyl-CoA thioesterase 12	BC025852|Acot12|74156|acyl-CoA thioesterase 12
mm9_v1_chr7_-_148040227_148040484	0.14919	BPTF.p2	BC052402|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK003184|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chr17_-_24278482_24278583	0.149042	BPTF.p2	AK165564|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF126294|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK149162|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	BC146001|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	BC146003|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF079535|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK149289|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AF086625|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK162677|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK143283|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK147835|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	AK147149|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	NM_001080773|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1	NM_011062|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr18_-_33623400_33623430	0.14896	BPTF.p2	NM_001109989|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr7_+_50685457_50685489	0.148791	BPTF.p2	BC092386|Lim2|233187|lens intrinsic membrane protein 2	AK029354|Lim2|233187|lens intrinsic membrane protein 2	NM_177693|Lim2|233187|lens intrinsic membrane protein 2	AK164958|Lim2|233187|lens intrinsic membrane protein 2	BC119253|Lim2|233187|lens intrinsic membrane protein 2	BC119255|Lim2|233187|lens intrinsic membrane protein 2
mm9_v1_chr17_+_66472859_66472952	0.148479	BPTF.p2	BC079656|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	NM_001003919|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK076357|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK049419|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK152868|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)
mm9_v1_chr17_+_5975585_5975739	0.147986	BPTF.p2	AK163512|Synj2|20975|synaptojanin 2	NM_001113351|Synj2|20975|synaptojanin 2	NM_011523|Synj2|20975|synaptojanin 2	AF041862|Synj2|20975|synaptojanin 2	BC060214|Synj2|20975|synaptojanin 2
mm9_v1_chr2_+_31526229_31526258	0.14733	BPTF.p2	BC021807|Exosc2|227715|exosome component 2	AK164618|Exosc2|227715|exosome component 2	AK166881|Exosc2|227715|exosome component 2	AK144234|Exosc2|227715|exosome component 2	BC021485|Exosc2|227715|exosome component 2	NM_144886|Exosc2|227715|exosome component 2
mm9_v1_chr4_-_118846799_118846813	0.146842	BPTF.p2	NM_001145936|Zfp691|195522|zinc finger protein 691
mm9_v1_chr2_-_12340979_12341107	0.146037	BPTF.p2	BC027202|Fam188a|66960|family with sequence similarity 188, member A	AK002900|Fam188a|66960|family with sequence similarity 188, member A	AK143250|Fam188a|66960|family with sequence similarity 188, member A	AK010050|Fam188a|66960|family with sequence similarity 188, member A	AK049869|Fam188a|66960|family with sequence similarity 188, member A	AK009891|Fam188a|66960|family with sequence similarity 188, member A	AK049694|Fam188a|66960|family with sequence similarity 188, member A	BC002225|Fam188a|66960|family with sequence similarity 188, member A	AK075792|Fam188a|66960|family with sequence similarity 188, member A	NM_024185|Fam188a|66960|family with sequence similarity 188, member A
mm9_v1_chr7_-_34953587_34953597	0.145733	BPTF.p2	AK146925|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chr18_+_35750071_35750097	0.14544	BPTF.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr3_+_88981440_88981554	0.145422	BPTF.p2	AK170115|Scamp3|24045|secretory carrier membrane protein 3	AF005036|Scamp3|24045|secretory carrier membrane protein 3	AF295403|Scamp3|24045|secretory carrier membrane protein 3
mm9_v1_chr15_-_74593991_74594015	0.14538	BPTF.p2	BC025135|Ly6d|17068|lymphocyte antigen 6 complex, locus D	NM_010742|Ly6d|17068|lymphocyte antigen 6 complex, locus D	X63782|Ly6d|17068|lymphocyte antigen 6 complex, locus D
mm9_v1_chr3_+_90318850_90318869	0.145327	BPTF.p2	AK002755|S100a13|20196|S100 calcium binding protein A13	AK008895|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr4_+_12067263_12067419	0.145243	BPTF.p2	NM_028226|Rbm12b|72397|RNA binding motif protein 12B	AK030861|Rbm12b|72397|RNA binding motif protein 12B
mm9_v1_chr5_+_74931439_74931607	0.145086	BPTF.p2	AK168464|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	NM_001159573|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	NM_001159574|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	NM_024183|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK049672|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK008561|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK005061|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	AK164105|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)	BC003263|Fip1l1|66899|FIP1 like 1 (S. cerevisiae)
mm9_v1_chr7_-_81429262_81429274	0.145036	BPTF.p2	AK020010|Slco3a1|108116|solute carrier organic anion transporter family, member 3a1
mm9_v1_chr9_+_57981881_57981881	0.144893	BPTF.p2	NM_001162476|Stra6|20897|stimulated by retinoic acid gene 6
mm9_v1_chr8_-_72826340_72826402	0.14476	BPTF.p2	BC085301|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49	NM_001024922|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49	BC099554|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49	AK139073|Ddx49|234374|DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
mm9_v1_chr7_-_20266749_20266811	0.144563	BPTF.p2	BC016889|Apoc4|11425|apolipoprotein C-IV	BC024657|Apoc4|11425|apolipoprotein C-IV	NM_007385|Apoc4|11425|apolipoprotein C-IV	BC100593|Apoc4|11425|apolipoprotein C-IV
mm9_v1_chr15_+_52127107_52127278	0.144551	BPTF.p2	AK050494|Slc30a8|239436|solute carrier family 30 (zinc transporter), member 8	NM_172816|Slc30a8|239436|solute carrier family 30 (zinc transporter), member 8	AK050482|Slc30a8|239436|solute carrier family 30 (zinc transporter), member 8	BC117544|Slc30a8|239436|solute carrier family 30 (zinc transporter), member 8	BC118521|Slc30a8|239436|solute carrier family 30 (zinc transporter), member 8
mm9_v1_chr5_+_88203590_88203597	0.144354	BPTF.p2	AK164738|Csn1s2a|12993|casein alpha s2-like A	D10215|Csn1s2a|12993|casein alpha s2-like A	NM_007785|Csn1s2a|12993|casein alpha s2-like A	AK142688|Csn1s2a|12993|casein alpha s2-like A
mm9_v1_chr3_-_51144470_51144612	0.144005	BPTF.p2	AK160118|Elf2|69257|E74-like factor 2	AK139199|Elf2|69257|E74-like factor 2	BC069901|Elf2|69257|E74-like factor 2	AK146819|Elf2|69257|E74-like factor 2
mm9_v1_chr2_+_162760505_162760606	0.143731	BPTF.p2	
mm9_v1_chr9_+_92170439_92170579	0.143685	BPTF.p2	NM_001195084|Plscr2|18828|phospholipid scramblase 2	NM_008880|Plscr2|18828|phospholipid scramblase 2	AK002410|Plscr2|18828|phospholipid scramblase 2	BC011299|Plscr2|18828|phospholipid scramblase 2	BC002012|Plscr2|18828|phospholipid scramblase 2
mm9_v1_chr1_-_12980994_12981257	0.142688	BPTF.p2	BC117943|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	BC117944|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK048882|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK041736|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	NM_172841|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK028758|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1
mm9_v1_chr18_-_6516073_6516084	0.142535	BPTF.p2	AK148194|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	AF079765|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	NM_007935|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)
mm9_v1_chr7_-_22086485_22086485	0.142517	BPTF.p2	NM_001166838|Vmn1r126|100043013|vomeronasal 1 receptor 126	NM_001167164|Gm4214|100043079|predicted gene 4214	NM_001167165|Gm4175|100043019|predicted gene 4175
mm9_v1_chr9_-_106691395_106691543	0.142516	BPTF.p2	BC133714|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK155151|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK090250|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	AK083903|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)	NM_030730|Rad54l2|81000|RAD54 like 2 (S. cerevisiae)
mm9_v1_chr5_-_124875921_124875965	0.14247	BPTF.p2	NM_001081203|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK077133|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK165852|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)
mm9_v1_chr1_-_152011986_152012077	0.142397	BPTF.p2	
mm9_v1_chr11_+_62633754_62633754	0.142063	BPTF.p2	NM_053169|Trim16|94092|tripartite motif-containing 16
mm9_v1_chr11_+_117127762_117127806	0.141153	BPTF.p2	AK122415|Sept9|53860|septin 9
mm9_v1_chr8_-_119098475_119098517	0.140845	BPTF.p2	
mm9_v1_chr3_+_96531494_96531647	0.140767	BPTF.p2	NM_026406|Rnf115|67845|ring finger protein 115	BC023113|Rnf115|67845|ring finger protein 115	AK042216|Rnf115|67845|ring finger protein 115	AK011584|Rnf115|67845|ring finger protein 115	AK131966|Rnf115|67845|ring finger protein 115	AK159772|Rnf115|67845|ring finger protein 115
mm9_v1_chr4_+_132091462_132091502	0.140741	BPTF.p2	AK088325|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	NM_172400|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC137735|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC145655|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK049526|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK150933|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK003892|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK168645|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC064732|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC066222|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC080760|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC057191|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8
mm9_v1_chr6_+_66986637_66986648	0.140701	BPTF.p2	AK054076|E230016M11Rik|320172|RIKEN cDNA E230016M11 gene
mm9_v1_chr11_-_85048228_85048358	0.140686	BPTF.p2	AK122222|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK132963|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK005440|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm9_v1_chr1_-_184397778_184397904	0.140498	BPTF.p2	AK192389|Capn2|12334|calpain 2	AK203804|Capn2|12334|calpain 2	AK198770|Capn2|12334|calpain 2	AK203361|Capn2|12334|calpain 2
mm9_v1_chr4_-_135050358_135050475	0.14036	BPTF.p2	BC057168|Nipal3|74552|NIPA-like domain containing 3	AK018640|Nipal3|74552|NIPA-like domain containing 3	AK138843|Nipal3|74552|NIPA-like domain containing 3	NM_028995|Nipal3|74552|NIPA-like domain containing 3	AK053937|Nipal3|74552|NIPA-like domain containing 3	AK082376|Nipal3|74552|NIPA-like domain containing 3	AK087811|Nipal3|74552|NIPA-like domain containing 3	AK148206|Nipal3|74552|NIPA-like domain containing 3	AK049696|Nipal3|74552|NIPA-like domain containing 3
mm9_v1_chr11_-_106210699_106210703	0.140238	BPTF.p2	BC129805|Scn4a|110880|sodium channel, voltage-gated, type IV, alpha	AJ278787|Scn4a|110880|sodium channel, voltage-gated, type IV, alpha	NM_133199|Scn4a|110880|sodium channel, voltage-gated, type IV, alpha
mm9_v1_chr16_+_48283847_48283930	0.140108	BPTF.p2	AK033197|Dppa4|73693|developmental pluripotency associated 4	NM_001018002|Dppa4|73693|developmental pluripotency associated 4	NM_028610|Dppa4|73693|developmental pluripotency associated 4	AK010753|Dppa4|73693|developmental pluripotency associated 4	BC064754|Dppa4|73693|developmental pluripotency associated 4	AF490348|Dppa4|73693|developmental pluripotency associated 4
mm9_v1_chr4_+_138331649_138331724	0.140075	BPTF.p2	AF169407|Pla2g2d|18782|phospholipase A2, group IID	AF169408|Pla2g2d|18782|phospholipase A2, group IID	NM_011109|Pla2g2d|18782|phospholipase A2, group IID	BC111806|Pla2g2d|18782|phospholipase A2, group IID	AK171797|Pla2g2d|18782|phospholipase A2, group IID	AF112983|Pla2g2d|18782|phospholipase A2, group IID	AK018005|Pla2g2d|18782|phospholipase A2, group IID	AK157392|Pla2g2d|18782|phospholipase A2, group IID	AF124374|Pla2g2d|18782|phospholipase A2, group IID	AK158364|Pla2g2d|18782|phospholipase A2, group IID	AK172367|Pla2g2d|18782|phospholipase A2, group IID
mm9_v1_chr9_-_55360042_55360055	0.138913	BPTF.p2	AK028118|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	NM_145615|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chr7_+_129363009_129363009	0.138851	BPTF.p2	BC119202|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene	BC119204|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene	NM_027363|2010110P09Rik|70261|RIKEN cDNA 2010110P09 gene
mm9_v1_chr15_-_99705812_99705887	0.138809	BPTF.p2	BC031490|Lima1|65970|LIM domain and actin binding 1	AK028311|Lima1|65970|LIM domain and actin binding 1	AK049350|Lima1|65970|LIM domain and actin binding 1	AF307845|Lima1|65970|LIM domain and actin binding 1	AK078959|Lima1|65970|LIM domain and actin binding 1	NM_001113545|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr14_+_30806158_30806226	0.138759	BPTF.p2	AK179069|Actr8|56249|ARP8 actin-related protein 8 homolog (S. cerevisiae)
mm9_v1_chr1_-_34496128_34496223	0.138309	BPTF.p2	AK162237|Ccdc115|69668|coiled-coil domain containing 115	AK154179|Ccdc115|69668|coiled-coil domain containing 115
mm9_v1_chr14_-_70205438_70205471	0.138169	BPTF.p2	AK038196|Rhobtb2|246710|Rho-related BTB domain containing 2
mm9_v1_chr7_+_152101004_152101187	0.137801	BPTF.p2	AK046447|Oraov1|72284|oral cancer overexpressed 1	AK008702|Oraov1|72284|oral cancer overexpressed 1	AK083244|Oraov1|72284|oral cancer overexpressed 1	AK169310|Oraov1|72284|oral cancer overexpressed 1	AK167712|Oraov1|72284|oral cancer overexpressed 1	BC013564|Oraov1|72284|oral cancer overexpressed 1	NM_028184|Oraov1|72284|oral cancer overexpressed 1	BC006906|Oraov1|72284|oral cancer overexpressed 1
mm9_v1_chr19_-_11893431_11893451	0.136957	BPTF.p2	AK171135|Stx3|20908|syntaxin 3
mm9_v1_chr11_+_102994627_102994711	0.136788	BPTF.p2	AK016624|Hexim2|71059|hexamthylene bis-acetamide inducible 2	AK160110|Hexim2|71059|hexamthylene bis-acetamide inducible 2	NM_001130516|Hexim2|71059|hexamthylene bis-acetamide inducible 2	NM_001130515|Hexim2|71059|hexamthylene bis-acetamide inducible 2	NM_027658|Hexim2|71059|hexamthylene bis-acetamide inducible 2	BC026458|Hexim2|71059|hexamthylene bis-acetamide inducible 2	BC115597|Hexim2|71059|hexamthylene bis-acetamide inducible 2	BC115598|Hexim2|71059|hexamthylene bis-acetamide inducible 2
mm9_v1_chr5_-_90652986_90653036	0.136476	BPTF.p2	AK156053|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC138972|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145479|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145486|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145728|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001033310|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001163456|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr11_+_60166826_60166909	0.136473	BPTF.p2	AK047468|Lrrc48|74665|leucine rich repeat containing 48	AK049695|Lrrc48|74665|leucine rich repeat containing 48	BC018412|Lrrc48|74665|leucine rich repeat containing 48	AK015430|Lrrc48|74665|leucine rich repeat containing 48	NM_029044|Lrrc48|74665|leucine rich repeat containing 48
mm9_v1_chr1_-_135557925_135557932	0.13593	BPTF.p2	BC066163|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chr19_+_34082779_34082838	0.135763	BPTF.p2	AK037106|Lipk|240633|lipase, family member K	NM_172837|Lipk|240633|lipase, family member K	BC055815|Lipk|240633|lipase, family member K	AK162706|Lipk|240633|lipase, family member K	BC037229|Lipk|240633|lipase, family member K
mm9_v1_chr6_-_38074549_38074585	0.135668	BPTF.p2	AK165464|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AF435090|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK128892|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK143790|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	NM_080467|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4
mm9_v1_chr10_+_69667423_69667431	0.135664	BPTF.p2	AK009351|2310015B20Rik|69563|RIKEN cDNA 2310015B20 gene
mm9_v1_chr6_-_131637480_131637512	0.135519	BPTF.p2	NM_020501|Tas2r105|57252|taste receptor, type 2, member 105	BC125515|Tas2r105|57252|taste receptor, type 2, member 105	BC125541|Tas2r105|57252|taste receptor, type 2, member 105
mm9_v1_chr4_-_14548903_14548926	0.135505	BPTF.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr9_-_19976012_19976012	0.135399	BPTF.p2	NM_146904|Olfr870|57251|olfactory receptor 870
mm9_v1_chr14_-_55236828_55236864	0.135271	BPTF.p2	AF060091|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	NM_011186|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AB003304|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	BC106144|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	BC012246|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AK088367|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AK010441|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5	AK133839|Psmb5|19173|proteasome (prosome, macropain) subunit, beta type 5
mm9_v1_chr15_-_97738692_97738754	0.13473	BPTF.p2	BC006716|Vdr|22337|vitamin D receptor	D31969|Vdr|22337|vitamin D receptor	AK154647|Vdr|22337|vitamin D receptor	AK030339|Vdr|22337|vitamin D receptor	NM_009504|Vdr|22337|vitamin D receptor	AK156789|Vdr|22337|vitamin D receptor
mm9_v1_chr4_+_88473179_88473319	0.134648	BPTF.p2	BC151087|Ifna6|15969|interferon alpha 6	NM_206871|Ifna6|15969|interferon alpha 6
mm9_v1_chr5_-_100158034_100158083	0.134337	BPTF.p2	AK048739|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK086859|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK044414|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK050558|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene
mm9_v1_chr11_+_74584328_74584437	0.134273	BPTF.p2	AK013306|Mett10d|67493|methyltransferase 10 domain containing	BC022902|Mett10d|67493|methyltransferase 10 domain containing	AK145022|Mett10d|67493|methyltransferase 10 domain containing	AK011780|Mett10d|67493|methyltransferase 10 domain containing	AK012739|Mett10d|67493|methyltransferase 10 domain containing	NM_026197|Mett10d|67493|methyltransferase 10 domain containing	AK145662|Mett10d|67493|methyltransferase 10 domain containing	AK029045|Mett10d|67493|methyltransferase 10 domain containing	AK161574|Mett10d|67493|methyltransferase 10 domain containing	BC003467|Mett10d|67493|methyltransferase 10 domain containing	AK168798|Mett10d|67493|methyltransferase 10 domain containing	BC037452|Mett10d|67493|methyltransferase 10 domain containing	BC054724|Mett10d|67493|methyltransferase 10 domain containing	BC049897|Mett10d|67493|methyltransferase 10 domain containing
mm9_v1_chr10_+_87841876_87842156	0.133988	BPTF.p2	BC060638|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AK140867|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AK173132|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_001004164|Gnptab|432486|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm9_v1_chr15_+_31531856_31531890	0.133402	BPTF.p2	NM_026546|Fam173b|68073|family with sequence similarity 173, member B	AK020868|Fam173b|68073|family with sequence similarity 173, member B	AK160923|Fam173b|68073|family with sequence similarity 173, member B	AK003724|Fam173b|68073|family with sequence similarity 173, member B	AK044518|Fam173b|68073|family with sequence similarity 173, member B	BC030179|Fam173b|68073|family with sequence similarity 173, member B
mm9_v1_chr11_-_106054817_106054916	0.133297	BPTF.p2	BC058517|Strada|72149|STE20-related kinase adaptor alpha	AK031715|Strada|72149|STE20-related kinase adaptor alpha	AK011451|Strada|72149|STE20-related kinase adaptor alpha	NM_028126|Strada|72149|STE20-related kinase adaptor alpha	AY341872|Strada|72149|STE20-related kinase adaptor alpha	AY341878|Strada|72149|STE20-related kinase adaptor alpha	AK031290|Strada|72149|STE20-related kinase adaptor alpha	AK138358|Strada|72149|STE20-related kinase adaptor alpha
mm9_v1_chr2_+_84499235_84499235	0.132827	BPTF.p2	NM_001145100|Gm13718|100270744|predicted gene 13718
mm9_v1_chr7_-_31011907_31012028	0.132821	BPTF.p2	AK214432|Tbcb|66411|tubulin folding cofactor B
mm9_v1_chr9_+_45715013_45715102	0.132461	BPTF.p2	AK165389|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK151980|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK148416|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	BC007322|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	U48830|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr5_+_144578694_144578848	0.132341	BPTF.p2	AK014775|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK156492|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK158437|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	BC111035|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK173160|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK020887|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1
mm9_v1_chr3_-_9610062_9610137	0.132289	BPTF.p2	AF292939|Zfp704|170753|zinc finger protein 704	NM_133218|Zfp704|170753|zinc finger protein 704
mm9_v1_chr11_+_77845814_77845821	0.131961	BPTF.p2	NM_183286|Dhrs13|70451|dehydrogenase/reductase (SDR family) member 13
mm9_v1_chr8_+_47254909_47254909	0.131675	BPTF.p2	BC058092|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	NM_025747|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene
mm9_v1_chr2_-_118305356_118305444	0.131372	BPTF.p2	M29264|Srp14|20813|signal recognition particle 14	AK156845|Srp14|20813|signal recognition particle 14	AK167821|Srp14|20813|signal recognition particle 14	BC021537|Srp14|20813|signal recognition particle 14	AK168144|Srp14|20813|signal recognition particle 14	AK019310|Srp14|20813|signal recognition particle 14	NM_009273|Srp14|20813|signal recognition particle 14
mm9_v1_chrX_-_5897723_5897841	0.131233	BPTF.p2	AF082348|Bmp15|12155|bone morphogenetic protein 15	AK135757|Bmp15|12155|bone morphogenetic protein 15	AK139936|Bmp15|12155|bone morphogenetic protein 15	BC055363|Bmp15|12155|bone morphogenetic protein 15	AK139773|Bmp15|12155|bone morphogenetic protein 15	AK139847|Bmp15|12155|bone morphogenetic protein 15	NM_009757|Bmp15|12155|bone morphogenetic protein 15	AK135882|Bmp15|12155|bone morphogenetic protein 15
mm9_v1_chr5_-_77640458_77640477	0.131196	BPTF.p2	BC087876|Spink2|69982|serine peptidase inhibitor, Kazal type 2	BC048619|Spink2|69982|serine peptidase inhibitor, Kazal type 2	AK005709|Spink2|69982|serine peptidase inhibitor, Kazal type 2	NM_183284|Spink2|69982|serine peptidase inhibitor, Kazal type 2
mm9_v1_chr16_+_37580303_37580398	0.130824	BPTF.p2	BC024369|Hgd|15233|homogentisate 1, 2-dioxygenase	BC037628|Hgd|15233|homogentisate 1, 2-dioxygenase	AK050193|Hgd|15233|homogentisate 1, 2-dioxygenase	BC044758|Hgd|15233|homogentisate 1, 2-dioxygenase	AK002584|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chrX_-_70510714_70510728	0.130817	BPTF.p2	L22977|Xlr3c|22446|X-linked lymphocyte-regulated 3C	NM_011727|Xlr3c|22446|X-linked lymphocyte-regulated 3C	U02600|Xlr3c|22446|X-linked lymphocyte-regulated 3C
mm9_v1_chr3_-_123210567_123210704	0.130596	BPTF.p2	AK008369|Snhg8|69895|small nucleolar RNA host gene 8
mm9_v1_chr12_+_31269290_31269335	0.12992	BPTF.p2	AK166323|Tmem18|211986|transmembrane protein 18	NM_172049|Tmem18|211986|transmembrane protein 18	AK133493|Tmem18|211986|transmembrane protein 18	AK160817|Tmem18|211986|transmembrane protein 18	AK170496|Tmem18|211986|transmembrane protein 18	BC024093|Tmem18|211986|transmembrane protein 18
mm9_v1_chr9_+_88475873_88475994	0.129792	BPTF.p2	AK145647|Trim43a|547109|tripartite motif-containing 43A	NM_001034906|Trim43a|547109|tripartite motif-containing 43A	AK166678|Trim43a|547109|tripartite motif-containing 43A	BC141236|Trim43a|547109|tripartite motif-containing 43A
mm9_v1_chr15_-_82169203_82169306	0.129587	BPTF.p2	AF079458|Naga|17939|N-acetyl galactosaminidase, alpha	AK133576|Naga|17939|N-acetyl galactosaminidase, alpha	BC021631|Naga|17939|N-acetyl galactosaminidase, alpha	AK077116|Naga|17939|N-acetyl galactosaminidase, alpha	AK153002|Naga|17939|N-acetyl galactosaminidase, alpha	NM_008669|Naga|17939|N-acetyl galactosaminidase, alpha
mm9_v1_chr16_+_4726348_4726451	0.129349	BPTF.p2	NM_001136066|Hmox2|15369|heme oxygenase (decycling) 2	AK134536|Hmox2|15369|heme oxygenase (decycling) 2	BC002011|Hmox2|15369|heme oxygenase (decycling) 2	AK032175|Hmox2|15369|heme oxygenase (decycling) 2	AF054670|Hmox2|15369|heme oxygenase (decycling) 2	AK152936|Hmox2|15369|heme oxygenase (decycling) 2
mm9_v1_chr7_+_111367306_111367377	0.128473	BPTF.p2	AK040000|Trim6|94088|tripartite motif-containing 6	NM_001013616|Trim6|94088|tripartite motif-containing 6	AK021253|Trim6|94088|tripartite motif-containing 6	AK033396|Trim6|94088|tripartite motif-containing 6	AK049238|Trim6|94088|tripartite motif-containing 6	BC138965|Trim6|94088|tripartite motif-containing 6
mm9_v1_chr8_-_131589372_131589416	0.128453	BPTF.p2	AK015811|Ccdc7|74703|coiled-coil domain containing 7	AK016006|Ccdc7|74703|coiled-coil domain containing 7	EF100607|Ccdc7|74703|coiled-coil domain containing 7	NM_001197041|Ccdc7|74703|coiled-coil domain containing 7	NM_029061|Ccdc7|74703|coiled-coil domain containing 7	AY854152|Ccdc7|74703|coiled-coil domain containing 7
mm9_v1_chr7_-_34953572_34953583	0.128007	BPTF.p2	BC054768|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK166133|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chr5_-_120922771_120922818	0.127463	BPTF.p2	BC022601|Sdsl|257635|serine dehydratase-like	NM_133902|Sdsl|257635|serine dehydratase-like	AF328927|Sdsl|257635|serine dehydratase-like
mm9_v1_chr2_+_163843744_163843775	0.127327	BPTF.p2	
mm9_v1_chr5_+_73684091_73684133	0.126953	BPTF.p2	AF295357|Ociad1|68095|OCIA domain containing 1	BC006937|Ociad1|68095|OCIA domain containing 1	AY208935|Ociad1|68095|OCIA domain containing 1
mm9_v1_chr18_+_52775568_52775635	0.126932	BPTF.p2	AK016749|Zfp474|66758|zinc finger protein 474	NM_025749|Zfp474|66758|zinc finger protein 474	BC055099|Zfp474|66758|zinc finger protein 474	AY350709|Zfp474|66758|zinc finger protein 474
mm9_v1_chrX_+_131135770_131135834	0.126805	BPTF.p2	AK141861|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK164115|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK168116|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	BC005461|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK169104|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK077716|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	NM_019868|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2
mm9_v1_chrX_+_71516128_71516339	0.126754	BPTF.p2	NM_052835|Rpl10|110954|ribosomal protein 10	AK146217|Rpl10|110954|ribosomal protein 10	AK011022|Rpl10|110954|ribosomal protein 10	AK088777|Rpl10|110954|ribosomal protein 10	AK144831|Rpl10|110954|ribosomal protein 10	AK151416|Rpl10|110954|ribosomal protein 10	AK151655|Rpl10|110954|ribosomal protein 10	AK152123|Rpl10|110954|ribosomal protein 10	AK152854|Rpl10|110954|ribosomal protein 10	AK153345|Rpl10|110954|ribosomal protein 10	AK160618|Rpl10|110954|ribosomal protein 10	AK167966|Rpl10|110954|ribosomal protein 10	AK168854|Rpl10|110954|ribosomal protein 10	BC086917|Rpl10|110954|ribosomal protein 10	M93980|Rpl10|110954|ribosomal protein 10	AK014054|Rpl10|110954|ribosomal protein 10	AK151736|Rpl10|110954|ribosomal protein 10	AK166610|Rpl10|110954|ribosomal protein 10	AK168250|Rpl10|110954|ribosomal protein 10	AK012561|Rpl10|110954|ribosomal protein 10	AK167239|Rpl10|110954|ribosomal protein 10	BC092383|Rpl10|110954|ribosomal protein 10	BC098204|Rpl10|110954|ribosomal protein 10	X75312|Rpl10|110954|ribosomal protein 10	BC048872|Rpl10|110954|ribosomal protein 10	BC099437|Rpl10|110954|ribosomal protein 10	BC024901|Rpl10|110954|ribosomal protein 10	BC082293|Rpl10|110954|ribosomal protein 10	BC083327|Rpl10|110954|ribosomal protein 10	BC006068|Rpl10|110954|ribosomal protein 10
mm9_v1_chr11_-_101634938_101634966	0.126752	BPTF.p2	BC068248|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr14_+_55840843_55840843	0.126698	BPTF.p2	AK017274|Dhrs2|71412|dehydrogenase/reductase member 2	NM_027790|Dhrs2|71412|dehydrogenase/reductase member 2
mm9_v1_chr12_-_77278242_77278245	0.126589	BPTF.p2	AK054290|Esr2|13983|estrogen receptor 2 (beta)	AK054301|Esr2|13983|estrogen receptor 2 (beta)	AK054413|Esr2|13983|estrogen receptor 2 (beta)	NM_010157|Esr2|13983|estrogen receptor 2 (beta)	NM_207707|Esr2|13983|estrogen receptor 2 (beta)
mm9_v1_chr12_+_113919213_113919483	0.126498	BPTF.p2	BC069952|Zbtb42|382639|zinc finger and BTB domain containing 42	AK079245|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr5_-_143666425_143666452	0.125611	BPTF.p2	
mm9_v1_chr5_+_135408221_135408290	0.125325	BPTF.p2	AY138964|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AY354925|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AY354926|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AY354927|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	NM_024479|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AK042578|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AK132481|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AK081683|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	BC002286|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)
mm9_v1_chr4_-_147818818_147818893	0.125006	BPTF.p2	BC071203|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK004550|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK078442|Ubiad1|71707|UbiA prenyltransferase domain containing 1	NM_027873|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK034787|Ubiad1|71707|UbiA prenyltransferase domain containing 1
mm9_v1_chr16_-_36562219_36562219	0.124968	BPTF.p2	AF110178|Casr|12374|calcium-sensing receptor	AF110179|Casr|12374|calcium-sensing receptor	NM_013803|Casr|12374|calcium-sensing receptor
mm9_v1_chr18_-_24280308_24280378	0.12466	BPTF.p2	BC056426|Ino80c|225280|INO80 complex subunit C	AK083718|Ino80c|225280|INO80 complex subunit C	NM_172625|Ino80c|225280|INO80 complex subunit C	AK077290|Ino80c|225280|INO80 complex subunit C	BC060961|Ino80c|225280|INO80 complex subunit C
mm9_v1_chr13_-_100670595_100670637	0.124336	BPTF.p2	BC056431|Cartpt|27220|CART prepropeptide	AK134656|Cartpt|27220|CART prepropeptide	AK135007|Cartpt|27220|CART prepropeptide	NM_001081493|Cartpt|27220|CART prepropeptide	NM_013732|Cartpt|27220|CART prepropeptide
mm9_v1_chr16_-_30267577_30267656	0.124174	BPTF.p2	BC025836|Cpn2|71756|carboxypeptidase N, polypeptide 2	AK005049|Cpn2|71756|carboxypeptidase N, polypeptide 2	NM_027904|Cpn2|71756|carboxypeptidase N, polypeptide 2
mm9_v1_chr3_-_93858806_93858806	0.124171	BPTF.p2	AK033449|Gm9125|668359|predicted gene 9125	NM_001163730|Gm9125|668359|predicted gene 9125
mm9_v1_chr11_+_95720178_95720317	0.12408	BPTF.p2	AK014714|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene	AK133925|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene
mm9_v1_chr9_-_20619426_20619525	0.123891	BPTF.p2	BC024367|Col5a3|53867|collagen, type V, alpha 3	BC138417|Col5a3|53867|collagen, type V, alpha 3	BC138419|Col5a3|53867|collagen, type V, alpha 3	BC145269|Col5a3|53867|collagen, type V, alpha 3	AF176645|Col5a3|53867|collagen, type V, alpha 3	NM_016919|Col5a3|53867|collagen, type V, alpha 3	AB040491|Col5a3|53867|collagen, type V, alpha 3
mm9_v1_chr11_-_35612385_35612385	0.123749	BPTF.p2	NM_001004147|Fbll1|237730|fibrillarin-like 1
mm9_v1_chr3_+_157204031_157204041	0.123528	BPTF.p2	BC051187|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr6_-_108135548_108135588	0.123414	BPTF.p2	BC026981|Sumf1|58911|sulfatase modifying factor 1	AK160917|Sumf1|58911|sulfatase modifying factor 1	AK159192|Sumf1|58911|sulfatase modifying factor 1	AK161203|Sumf1|58911|sulfatase modifying factor 1	AK151874|Sumf1|58911|sulfatase modifying factor 1	NM_145937|Sumf1|58911|sulfatase modifying factor 1
mm9_v1_chr7_-_30980042_30980100	0.123387	BPTF.p2	AF058298|Capns1|12336|calpain, small subunit 1	BC018352|Capns1|12336|calpain, small subunit 1	BC090988|Capns1|12336|calpain, small subunit 1	NM_009795|Capns1|12336|calpain, small subunit 1
mm9_v1_chr6_-_41586296_41586345	0.123156	BPTF.p2	AB037373|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	BC016101|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	AK077234|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6
mm9_v1_chr4_+_41296028_41296100	0.122749	BPTF.p2	NM_023305|Ubap1|67123|ubiquitin-associated protein 1	AK009596|Ubap1|67123|ubiquitin-associated protein 1	AK076078|Ubap1|67123|ubiquitin-associated protein 1	AK028477|Ubap1|67123|ubiquitin-associated protein 1	AK163229|Ubap1|67123|ubiquitin-associated protein 1	AK033121|Ubap1|67123|ubiquitin-associated protein 1	AK028670|Ubap1|67123|ubiquitin-associated protein 1	BC065996|Ubap1|67123|ubiquitin-associated protein 1	AF275549|Ubap1|67123|ubiquitin-associated protein 1	AK030370|Ubap1|67123|ubiquitin-associated protein 1
mm9_v1_chr5_+_147043131_147043250	0.122649	BPTF.p2	NM_153599|Cdk8|264064|cyclin-dependent kinase 8
mm9_v1_chr19_-_60937266_60937332	0.122436	BPTF.p2	AF325263|Sfxn4|94281|sideroflexin 4	BC089535|Sfxn4|94281|sideroflexin 4	AK148530|Sfxn4|94281|sideroflexin 4	BC058211|Sfxn4|94281|sideroflexin 4	NM_053198|Sfxn4|94281|sideroflexin 4
mm9_v1_chr5_+_54389740_54389855	0.122254	BPTF.p2	AK173183|Stim2|116873|stromal interaction molecule 2	NM_001081103|Stim2|116873|stromal interaction molecule 2	AK080310|Stim2|116873|stromal interaction molecule 2	BC137881|Stim2|116873|stromal interaction molecule 2	BC145001|Stim2|116873|stromal interaction molecule 2
mm9_v1_chr2_+_127413130_127413169	0.122228	BPTF.p2	AK155101|Mrps5|77721|mitochondrial ribosomal protein S5	AK018829|Mrps5|77721|mitochondrial ribosomal protein S5	AK078198|Mrps5|77721|mitochondrial ribosomal protein S5	AK083366|Mrps5|77721|mitochondrial ribosomal protein S5	AB049941|Mrps5|77721|mitochondrial ribosomal protein S5	NM_029963|Mrps5|77721|mitochondrial ribosomal protein S5	BC021947|Mrps5|77721|mitochondrial ribosomal protein S5
mm9_v1_chr5_+_20930720_20930881	0.122221	BPTF.p2	NM_177869|Fam185a|330050|family with sequence similarity 185, member A	AK030922|Fam185a|330050|family with sequence similarity 185, member A	AK076256|Fam185a|330050|family with sequence similarity 185, member A	BC055342|Fam185a|330050|family with sequence similarity 185, member A
mm9_v1_chr3_-_94386449_94386477	0.121861	BPTF.p2	AK122296|Snx27|76742|sorting nexin family member 27	BC053495|Snx27|76742|sorting nexin family member 27
mm9_v1_chr4_+_122960059_122960153	0.121308	BPTF.p2	BC058263|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	BC056432|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	NM_130881|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4
mm9_v1_chr11_+_8948594_8948715	0.12129	BPTF.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chr17_+_12571455_12571482	0.120811	BPTF.p2	BC014773|Plg|18815|plasminogen	NM_008877|Plg|18815|plasminogen
mm9_v1_chr4_+_61947463_61947577	0.120402	BPTF.p2	NM_025286|Slc31a2|20530|solute carrier family 31, member 2	AK008473|Slc31a2|20530|solute carrier family 31, member 2	BC099447|Slc31a2|20530|solute carrier family 31, member 2	AK007579|Slc31a2|20530|solute carrier family 31, member 2	AK152812|Slc31a2|20530|solute carrier family 31, member 2	AK003269|Slc31a2|20530|solute carrier family 31, member 2	AK151612|Slc31a2|20530|solute carrier family 31, member 2	BC029183|Slc31a2|20530|solute carrier family 31, member 2
mm9_v1_chr6_+_113433408_113433466	0.120387	BPTF.p2	AK042344|Creld1|171508|cysteine-rich with EGF-like domains 1	AK077726|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chrX_-_136533042_136533082	0.12033	BPTF.p2	AK163147|Rbm41|237073|RNA binding motif protein 41	AK084514|Rbm41|237073|RNA binding motif protein 41	AK084629|Rbm41|237073|RNA binding motif protein 41	AK141075|Rbm41|237073|RNA binding motif protein 41	AK166005|Rbm41|237073|RNA binding motif protein 41	AK040213|Rbm41|237073|RNA binding motif protein 41	AK164496|Rbm41|237073|RNA binding motif protein 41	AK166229|Rbm41|237073|RNA binding motif protein 41
mm9_v1_chr2_+_34287544_34287544	0.120321	BPTF.p2	BC090644|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	NM_177345|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr4_+_128867107_128867262	0.119687	BPTF.p2	BC013552|Yars|107271|tyrosyl-tRNA synthetase	AK043837|Yars|107271|tyrosyl-tRNA synthetase	BC026615|Yars|107271|tyrosyl-tRNA synthetase	BC022143|Yars|107271|tyrosyl-tRNA synthetase	AK145356|Yars|107271|tyrosyl-tRNA synthetase	AK028785|Yars|107271|tyrosyl-tRNA synthetase	AK151880|Yars|107271|tyrosyl-tRNA synthetase	AK076634|Yars|107271|tyrosyl-tRNA synthetase	AK139579|Yars|107271|tyrosyl-tRNA synthetase	AK169708|Yars|107271|tyrosyl-tRNA synthetase
mm9_v1_chrX_+_68916841_68916944	0.119576	BPTF.p2	AK132272|Gpr50|14765|G-protein-coupled receptor 50	AF065145|Gpr50|14765|G-protein-coupled receptor 50	NM_010340|Gpr50|14765|G-protein-coupled receptor 50	BC137982|Gpr50|14765|G-protein-coupled receptor 50
mm9_v1_chr7_+_128061297_128061331	0.118933	BPTF.p2	AK012184|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK144721|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK146279|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK159723|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC037637|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC028924|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr7_-_34953455_34953570	0.118832	BPTF.p2	AK178317|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK184258|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK189465|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK192304|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK194855|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK204958|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK213601|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK219234|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK219985|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK169168|Uba2|50995|ubiquitin-like modifier activating enzyme 2	U35833|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK163451|Uba2|50995|ubiquitin-like modifier activating enzyme 2	NM_016682|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK151765|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK152977|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK168673|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK164826|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK165321|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK152415|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chrX_+_45461901_45462257	0.118496	BPTF.p2	AK172086|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	NM_133213|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AF428102|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK164538|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK078835|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK087627|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK085520|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AF367247|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	BC140977|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
mm9_v1_chr14_+_45839391_45839393	0.11848	BPTF.p2	AK082691|Gpr137c|70713|G protein-coupled receptor 137C	NM_027518|Gpr137c|70713|G protein-coupled receptor 137C	AK018183|Gpr137c|70713|G protein-coupled receptor 137C
mm9_v1_chr12_+_106397899_106397916	0.11799	BPTF.p2	AK136181|Tcl1b1|27379|T-cell leukemia/lymphoma 1B, 1	NM_013773|Tcl1b1|27379|T-cell leukemia/lymphoma 1B, 1	AF195488|Tcl1b1|27379|T-cell leukemia/lymphoma 1B, 1
mm9_v1_chr7_-_53987912_53987980	0.117922	BPTF.p2	NM_011316|Saa4|20211|serum amyloid A 4	U02554|Saa4|20211|serum amyloid A 4
mm9_v1_chr5_+_53225253_53225293	0.117574	BPTF.p2	AK166061|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr4_+_116667944_116667979	0.117537	BPTF.p2	BC070411|Hectd3|76608|HECT domain containing 3	NM_175244|Hectd3|76608|HECT domain containing 3
mm9_v1_chr17_+_18107421_18107421	0.117272	BPTF.p2	NM_008042|Fpr3|14294|formyl peptide receptor 3
mm9_v1_chr11_+_96160484_96160526	0.117238	BPTF.p2	BC016893|Hoxb6|15414|homeobox B6	NM_008269|Hoxb6|15414|homeobox B6
mm9_v1_chr8_+_114464639_114464646	0.116942	BPTF.p2	BC026798|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr15_+_65703468_65703625	0.116678	BPTF.p2	AK039483|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr5_-_110537170_110537204	0.116523	BPTF.p2	AK159462|Gtpbp6|107999|GTP binding protein 6 (putative)
mm9_v1_chr13_+_73674194_73674271	0.116139	BPTF.p2	BC054119|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	NM_010020|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK032629|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK136885|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	U16265|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AF109072|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
mm9_v1_chr7_-_112145415_112145415	0.11589	BPTF.p2	NM_146760|Olfr672|258755|olfactory receptor 672
mm9_v1_chr7_+_6683288_6683655	0.115817	BPTF.p2	AF229257|Usp29|57775|ubiquitin specific peptidase 29	AK142304|Usp29|57775|ubiquitin specific peptidase 29	AK084156|Usp29|57775|ubiquitin specific peptidase 29	AF227912|Usp29|57775|ubiquitin specific peptidase 29	AK038752|Usp29|57775|ubiquitin specific peptidase 29	NM_021323|Usp29|57775|ubiquitin specific peptidase 29
mm9_v1_chr4_-_43849385_43849388	0.115811	BPTF.p2	BC137911|Olfr157|100040268|olfactory receptor 157	BC137912|Olfr157|100040268|olfactory receptor 157	NM_019475|Olfr157|100040268|olfactory receptor 157
mm9_v1_chr17_+_29235731_29235767	0.115675	BPTF.p2	AK194916|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr14_+_27852148_27852279	0.115337	BPTF.p2	AF494210|Il17rd|171463|interleukin 17 receptor D	NM_134437|Il17rd|171463|interleukin 17 receptor D	BC138629|Il17rd|171463|interleukin 17 receptor D	BC066804|Il17rd|171463|interleukin 17 receptor D	AF459444|Il17rd|171463|interleukin 17 receptor D
mm9_v1_chr1_-_159342068_159342217	0.115285	BPTF.p2	BC120902|Rasal2|226525|RAS protein activator like 2
mm9_v1_chr10_-_61246611_61246701	0.115238	BPTF.p2	AF336305|H2afy2|404634|H2A histone family, member Y2	NM_207000|H2afy2|404634|H2A histone family, member Y2	BC045140|H2afy2|404634|H2A histone family, member Y2	AK165020|H2afy2|404634|H2A histone family, member Y2	AK018355|H2afy2|404634|H2A histone family, member Y2	BC046794|H2afy2|404634|H2A histone family, member Y2	AK078464|H2afy2|404634|H2A histone family, member Y2	AK032636|H2afy2|404634|H2A histone family, member Y2	AK020744|H2afy2|404634|H2A histone family, member Y2
mm9_v1_chr19_+_37000847_37000920	0.115024	BPTF.p2	AB287295|Btaf1|107182|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm9_v1_chr8_-_28524173_28524415	0.115012	BPTF.p2	AY574265|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AJ245706|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	AK149262|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	BC031985|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6	NM_021369|Chrna6|11440|cholinergic receptor, nicotinic, alpha polypeptide 6
mm9_v1_chr4_-_102887390_102887488	0.114546	BPTF.p2	AK169775|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK220330|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK049462|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK052968|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK049180|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC115984|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	NM_177732|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
mm9_v1_chr7_-_121261237_121261289	0.114164	BPTF.p2	BC003871|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172113|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172037|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2
mm9_v1_chr1_-_163089444_163089444	0.114095	BPTF.p2	AK015528|4930469G21Rik|74933|RIKEN cDNA 4930469G21 gene	NM_001195189|4930469G21Rik|74933|RIKEN cDNA 4930469G21 gene
mm9_v1_chr5_-_86601756_86601789	0.114092	BPTF.p2	AK053583|Uba6|231380|ubiquitin-like modifier activating enzyme 6	BC063048|Uba6|231380|ubiquitin-like modifier activating enzyme 6	NM_172712|Uba6|231380|ubiquitin-like modifier activating enzyme 6	AK086539|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr2_-_35835311_35835317	0.114046	BPTF.p2	AK016881|Ttll11|74410|tubulin tyrosine ligase-like family, member 11
mm9_v1_chr6_-_125112509_125113407	0.114018	BPTF.p2	AK160495|Gm10481|433845|glyceraldehyde-3-phosphate dehydrogenase pseudogene	BC091736|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK178680|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK193664|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK193983|Gm5523|433273|glyceraldehyde-3-phosphate dehydrogenase pseudogene	AK200636|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK188672|Gm5523|433273|glyceraldehyde-3-phosphate dehydrogenase pseudogene	AK211452|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	DQ403054|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase
mm9_v1_chr13_-_70776511_70776699	0.114005	BPTF.p2	AK143610|BC018507|218333|cDNA sequence BC018507	NM_144837|BC018507|218333|cDNA sequence BC018507
mm9_v1_chr13_+_33119282_33119422	0.113918	BPTF.p2	AK005491|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	NM_011452|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	U96705|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK167563|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK171850|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	BC064768|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b
mm9_v1_chr15_-_94408654_94408675	0.113702	BPTF.p2	
mm9_v1_chr15_-_98748371_98748661	0.113668	BPTF.p2	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr10_+_79578849_79578946	0.113592	BPTF.p2	AF129870|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr11_-_17853850_17853896	0.113485	BPTF.p2	BC028916|Etaa1|68145|Ewing's tumor-associated antigen 1	AK034138|Etaa1|68145|Ewing's tumor-associated antigen 1	AK019965|Etaa1|68145|Ewing's tumor-associated antigen 1	NM_026576|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr2_-_125684720_125684819	0.113247	BPTF.p2	AF071312|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	BC023096|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AF087688|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK145225|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK146153|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK132207|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK084421|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK010383|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK037757|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	AK132776|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	NM_009939|Cops2|12848|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm9_v1_chr7_-_111001598_111001720	0.113153	BPTF.p2	V00857|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	M26897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	BC057014|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK011619|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012501|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	AK012897|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain	NM_008221|Hbb-y|15135|hemoglobin Y, beta-like embryonic chain
mm9_v1_chr19_+_26679649_26679686	0.112735	BPTF.p2	BC075641|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	NM_011416|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK020092|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr5_+_138882703_138882746	0.112628	BPTF.p2	NM_028130|Zfp157|72154|zinc finger protein 157	AK042470|Zfp157|72154|zinc finger protein 157	BC059261|Zfp157|72154|zinc finger protein 157	AK083851|Zfp157|72154|zinc finger protein 157	BC049676|Zfp157|72154|zinc finger protein 157	AK028290|Zfp157|72154|zinc finger protein 157
mm9_v1_chr10_-_86470647_86470766	0.112626	BPTF.p2	BC145110|Stab2|192188|stabilin 2	DQ786775|Stab2|192188|stabilin 2	AF364951|Stab2|192188|stabilin 2	NM_138673|Stab2|192188|stabilin 2	AK164675|Stab2|192188|stabilin 2
mm9_v1_chr12_-_105392063_105392090	0.11255	BPTF.p2	BC116724|Serpina3c|16625|serine (or cysteine) peptidase inhibitor, clade A, member 3C	NM_008458|Serpina3c|16625|serine (or cysteine) peptidase inhibitor, clade A, member 3C
mm9_v1_chr6_-_130181634_130181704	0.112417	BPTF.p2	AF288375|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	EU429321|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC099859|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC099860|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC099862|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	S78689|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF074457|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF283248|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF283249|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF283253|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF307945|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF307946|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U12890|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF288376|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AK143240|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC140984|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC130251|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	NM_014194|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10094|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chrX_-_140367467_140367853	0.112069	BPTF.p2	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chr16_-_44558929_44559002	0.111676	BPTF.p2	BC078631|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	BC062892|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028889|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	NM_172506|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK043379|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028770|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm9_v1_chrX_-_160396490_160396625	0.111659	BPTF.p2	BC083160|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC099617|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC065693|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	D45205|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK030296|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK045504|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_009453|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_178794|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
mm9_v1_chr2_-_154198449_154198468	0.111474	BPTF.p2	AK010081|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK010097|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	NM_025876|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK088517|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK136570|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr5_+_117769274_117769326	0.111401	BPTF.p2	NM_001033311|Vsig10|231668|V-set and immunoglobulin domain containing 10	AK138152|Vsig10|231668|V-set and immunoglobulin domain containing 10
mm9_v1_chr17_-_27075896_27076239	0.111049	BPTF.p2	AK181681|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK187338|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC037500|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC021463|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr2_+_126834431_126834485	0.110672	BPTF.p2	NM_175550|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK143351|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK163701|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK039257|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK036944|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK144636|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1
mm9_v1_chr14_-_75992922_75992922	0.11055	BPTF.p2	NM_001164139|Spert|67926|spermatid associated	NM_001164140|Spert|67926|spermatid associated
mm9_v1_chr4_-_133556751_133556816	0.110436	BPTF.p2	AK149138|Dhdds|67422|dehydrodolichyl diphosphate synthase	BC004011|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK049991|Dhdds|67422|dehydrodolichyl diphosphate synthase	NM_026144|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK004993|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK014317|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK034277|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK135087|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK017556|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK171207|Dhdds|67422|dehydrodolichyl diphosphate synthase	AK036929|Dhdds|67422|dehydrodolichyl diphosphate synthase
mm9_v1_chr16_+_17146981_17147071	0.110372	BPTF.p2	AK032396|Ydjc|69101|YdjC homolog (bacterial)	AK140044|Ydjc|69101|YdjC homolog (bacterial)	BC030425|Ydjc|69101|YdjC homolog (bacterial)	AK007503|Ydjc|69101|YdjC homolog (bacterial)	BC115584|Ydjc|69101|YdjC homolog (bacterial)	BC115585|Ydjc|69101|YdjC homolog (bacterial)	NM_026940|Ydjc|69101|YdjC homolog (bacterial)
mm9_v1_chr8_-_10928326_10928456	0.110368	BPTF.p2	AK014460|3930402G23Rik|665306|RIKEN cDNA 3930402G23 gene
mm9_v1_chr1_+_134195202_134195202	0.110117	BPTF.p2	AK080356|Klhdc8a|213417|kelch domain containing 8A	NM_144810|Klhdc8a|213417|kelch domain containing 8A
mm9_v1_chr10_-_61885155_61885204	0.109333	BPTF.p2	AK044665|Hkdc1|216019|hexokinase domain containing 1	AK145980|Hkdc1|216019|hexokinase domain containing 1	BC016235|Hkdc1|216019|hexokinase domain containing 1	NM_145419|Hkdc1|216019|hexokinase domain containing 1
mm9_v1_chr6_+_115372083_115372128	0.109301	BPTF.p2	AY208183|Pparg|19016|peroxisome proliferator activated receptor gamma	AY208184|Pparg|19016|peroxisome proliferator activated receptor gamma	AY243585|Pparg|19016|peroxisome proliferator activated receptor gamma	BC021798|Pparg|19016|peroxisome proliferator activated receptor gamma	NM_011146|Pparg|19016|peroxisome proliferator activated receptor gamma	U09138|Pparg|19016|peroxisome proliferator activated receptor gamma	EF062476|Pparg|19016|peroxisome proliferator activated receptor gamma	CT010340|Pparg|19016|peroxisome proliferator activated receptor gamma
mm9_v1_chr9_-_91260619_91260636	0.109166	BPTF.p2	NM_009573|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chrX_+_66015013_66015108	0.109139	BPTF.p2	BC099411|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166619|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166620|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_174993|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC138087|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145139|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145140|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171922|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171923|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171947|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171948|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AK076190|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AY214130|Fmr1nb|207854|fragile X mental retardation 1 neighbor
mm9_v1_chr18_-_25324465_25324465	0.108984	BPTF.p2	NM_001142697|5730494M16Rik|66648|RIKEN cDNA 5730494M16 gene
mm9_v1_chrX_-_141884479_141884623	0.10881	BPTF.p2	AK053987|Amot|27494|angiomotin
mm9_v1_chr15_-_88953516_88953579	0.108601	BPTF.p2	AK052441|Tubgcp6|328580|tubulin, gamma complex associated protein 6	AK129420|Tubgcp6|328580|tubulin, gamma complex associated protein 6	NM_001163319|Tubgcp6|328580|tubulin, gamma complex associated protein 6
mm9_v1_chr6_-_83456775_83456962	0.108494	BPTF.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr11_+_61890494_61890602	0.108408	BPTF.p2	AK050982|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	AK220465|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1	NM_001029936|Specc1|432572|sperm antigen with calponin homology and coiled-coil domains 1
mm9_v1_chrX_+_20425667_20425723	0.108108	BPTF.p2	NM_001159645|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	NM_009703|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK169757|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK133797|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK163567|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK039044|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK085823|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	AK135358|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog	BC004757|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr17_-_18414529_18414529	0.108035	BPTF.p2	NM_001104543|Vmn2r94|665227|vomeronasal 2, receptor 94
mm9_v1_chr16_-_20302299_20302462	0.107941	BPTF.p2	AK039142|Parl|381038|presenilin associated, rhomboid-like	BC083153|Parl|381038|presenilin associated, rhomboid-like	AK151652|Parl|381038|presenilin associated, rhomboid-like	NM_001005767|Parl|381038|presenilin associated, rhomboid-like	AK150980|Parl|381038|presenilin associated, rhomboid-like	AK207637|Parl|381038|presenilin associated, rhomboid-like
mm9_v1_chr6_-_130330679_130330825	0.107787	BPTF.p2	AF146571|Klra15|27423|killer cell lectin-like receptor, subfamily A, member 15	NM_013793|Klra15|27423|killer cell lectin-like receptor, subfamily A, member 15	U34890|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF218077|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	BC125466|Klra15|27423|killer cell lectin-like receptor, subfamily A, member 15	BC125494|Klra15|27423|killer cell lectin-like receptor, subfamily A, member 15	BC140968|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	BC144929|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF288381|Klra22|93969|killer cell lectin-like receptor subfamily A, member 22	NM_053152|Klra22|93969|killer cell lectin-like receptor subfamily A, member 22
mm9_v1_chr1_+_89999782_89999852	0.107515	BPTF.p2	NM_201410|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B	BC026561|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B
mm9_v1_chr13_-_104710374_104710739	0.107215	BPTF.p2	BC141178|Erbb2ip|59079|Erbb2 interacting protein	BC141188|Erbb2ip|59079|Erbb2 interacting protein	BC145498|Erbb2ip|59079|Erbb2 interacting protein	BC145509|Erbb2ip|59079|Erbb2 interacting protein	AK169529|Erbb2ip|59079|Erbb2 interacting protein	NM_001005868|Erbb2ip|59079|Erbb2 interacting protein	NM_021563|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr10_+_60938535_60938600	0.107041	BPTF.p2	AK139384|Lrrc20|216011|leucine rich repeat containing 20	AK136380|Lrrc20|216011|leucine rich repeat containing 20	AK145920|Lrrc20|216011|leucine rich repeat containing 20	AK150142|Lrrc20|216011|leucine rich repeat containing 20	BC036304|Lrrc20|216011|leucine rich repeat containing 20	NM_153542|Lrrc20|216011|leucine rich repeat containing 20	AK150246|Lrrc20|216011|leucine rich repeat containing 20
mm9_v1_chr4_-_150422072_150422126	0.106716	BPTF.p2	
mm9_v1_chr10_+_80599005_80599015	0.106629	BPTF.p2	BC024815|Zbtb7a|16969|zinc finger and BTB domain containing 7a	NM_010731|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr18_-_52689504_52689520	0.106379	BPTF.p2	AK164634|Lox|16948|lysyl oxidase
mm9_v1_chr2_-_130005048_130005140	0.106069	BPTF.p2	AK077537|Snrpb|20638|small nuclear ribonucleoprotein B	NM_009225|Snrpb|20638|small nuclear ribonucleoprotein B	AK146319|Snrpb|20638|small nuclear ribonucleoprotein B
mm9_v1_chr8_-_46347363_46347377	0.105964	BPTF.p2	BC019485|F11|109821|coagulation factor XI	AF356627|F11|109821|coagulation factor XI
mm9_v1_chr16_-_18235102_18235235	0.105459	BPTF.p2	AY668947|Zdhhc8|27801|zinc finger, DHHC domain containing 8	AY894892|Zdhhc8|27801|zinc finger, DHHC domain containing 8	NM_172151|Zdhhc8|27801|zinc finger, DHHC domain containing 8
mm9_v1_chr2_-_60391245_60391354	0.105366	BPTF.p2	BC141355|Pla2r1|18779|phospholipase A2 receptor 1	BC141356|Pla2r1|18779|phospholipase A2 receptor 1	D30779|Pla2r1|18779|phospholipase A2 receptor 1	NM_008867|Pla2r1|18779|phospholipase A2 receptor 1	BC048780|Pla2r1|18779|phospholipase A2 receptor 1	AK011427|Pla2r1|18779|phospholipase A2 receptor 1	AK143853|Pla2r1|18779|phospholipase A2 receptor 1
mm9_v1_chr6_-_85019448_85019472	0.105357	BPTF.p2	BC144781|Exoc6b|75914|exocyst complex component 6B	BC145693|Exoc6b|75914|exocyst complex component 6B	AK165019|Exoc6b|75914|exocyst complex component 6B	AK142759|Exoc6b|75914|exocyst complex component 6B
mm9_v1_chr2_+_145686377_145686454	0.105275	BPTF.p2	AK014548|Rin2|74030|Ras and Rab interactor 2	AK040763|Rin2|74030|Ras and Rab interactor 2	AK152025|Rin2|74030|Ras and Rab interactor 2	BC005529|Rin2|74030|Ras and Rab interactor 2	AK154421|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr17_+_56724423_56724443	0.104827	BPTF.p2	BC018200|Safb|224903|scaffold attachment factor B
mm9_v1_chr7_-_25022472_25022616	0.104777	BPTF.p2	AF167316|Zfp109|56869|zinc finger protein 109	NM_020262|Zfp109|56869|zinc finger protein 109
mm9_v1_chr2_-_125657845_125657847	0.104719	BPTF.p2	
mm9_v1_chr4_+_66488606_66488658	0.104513	BPTF.p2	BC029856|Tlr4|21898|toll-like receptor 4	AK014533|Tlr4|21898|toll-like receptor 4	AK030348|Tlr4|21898|toll-like receptor 4	AF095353|Tlr4|21898|toll-like receptor 4
mm9_v1_chr7_+_136735365_136735478	0.104355	BPTF.p2	NM_172255|Wdr11|207425|WD repeat domain 11	AK166369|Wdr11|207425|WD repeat domain 11	AK170058|Wdr11|207425|WD repeat domain 11	BC037177|Wdr11|207425|WD repeat domain 11
mm9_v1_chr5_-_88128419_88128445	0.104102	BPTF.p2	BC019114|Csn2|12991|casein beta	BC013332|Csn2|12991|casein beta	BC092098|Csn2|12991|casein beta	BC020356|Csn2|12991|casein beta	BC050270|Csn2|12991|casein beta	BC020383|Csn2|12991|casein beta	BC021153|Csn2|12991|casein beta	BC057671|Csn2|12991|casein beta	BC080709|Csn2|12991|casein beta	AK164792|Csn2|12991|casein beta	AK164793|Csn2|12991|casein beta	AK085729|Csn2|12991|casein beta	AK021324|Csn2|12991|casein beta	AK021328|Csn2|12991|casein beta	AK052803|Csn2|12991|casein beta	AK052805|Csn2|12991|casein beta	AK052822|Csn2|12991|casein beta	AK085678|Csn2|12991|casein beta	AK085694|Csn2|12991|casein beta	AK085698|Csn2|12991|casein beta	AK085756|Csn2|12991|casein beta	AK142616|Csn2|12991|casein beta	AK142620|Csn2|12991|casein beta	AK142631|Csn2|12991|casein beta	AK142635|Csn2|12991|casein beta	AK164747|Csn2|12991|casein beta	AK164761|Csn2|12991|casein beta	AK164791|Csn2|12991|casein beta	AK164794|Csn2|12991|casein beta	NM_009972|Csn2|12991|casein beta	X04490|Csn2|12991|casein beta
mm9_v1_chr7_-_125263314_125263384	0.103573	BPTF.p2	AK004228|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK012904|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK005514|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr9_-_78162603_78162603	0.103504	BPTF.p2	NM_001164523|Omt2a|18379|oocyte maturation, alpha
mm9_v1_chr17_-_36106668_36106727	0.10291	BPTF.p2	BC046965|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	BC032250|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	BC063094|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	NM_013854|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	AK077741|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1
mm9_v1_chr7_+_54106270_54106390	0.10178	BPTF.p2	AK209400|Ldha|16828|lactate dehydrogenase A	AK146980|Ldha|16828|lactate dehydrogenase A	AK177468|Ldha|16828|lactate dehydrogenase A	AK194735|Ldha|16828|lactate dehydrogenase A	AK188760|Ldha|16828|lactate dehydrogenase A	AK200149|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr7_+_110565209_110565209	0.101671	BPTF.p2	NM_010089|Usp17l5|13532|ubiquitin specific peptidase 17-like 5	U70369|Usp17l5|13532|ubiquitin specific peptidase 17-like 5
mm9_v1_chrM_-_13886_13905	0.101587	BPTF.p2	
mm9_v1_chr4_+_116924581_116924617	0.101293	BPTF.p2	AK004164|Tmem53|68777|transmembrane protein 53	NM_026837|Tmem53|68777|transmembrane protein 53
mm9_v1_chr18_+_6603626_6603630	0.100983	BPTF.p2	BC049627|4921524L21Rik|70901|RIKEN cDNA 4921524L21 gene	AK014961|4921524L21Rik|70901|RIKEN cDNA 4921524L21 gene	NM_027598|4921524L21Rik|70901|RIKEN cDNA 4921524L21 gene
mm9_v1_chr5_-_145770501_145770504	0.100965	BPTF.p2	AY950703|Kpna7|381686|karyopherin alpha 7 (importin alpha 8)	NM_001013774|Kpna7|381686|karyopherin alpha 7 (importin alpha 8)
mm9_v1_chr7_+_52151432_52151509	0.100583	BPTF.p2	NM_027376|Fuz|70300|fuzzy homolog (Drosophila)	AK134650|Fuz|70300|fuzzy homolog (Drosophila)	AK168939|Fuz|70300|fuzzy homolog (Drosophila)	AK045745|Fuz|70300|fuzzy homolog (Drosophila)	AK033247|Fuz|70300|fuzzy homolog (Drosophila)	BC045601|Fuz|70300|fuzzy homolog (Drosophila)	AK011195|Fuz|70300|fuzzy homolog (Drosophila)
mm9_v1_chr13_-_91881231_91881476	0.0999877	BPTF.p2	AK135005|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK162854|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK161222|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK162063|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK048302|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene
mm9_v1_chr14_-_55272452_55272539	0.099955	BPTF.p2	AF124725|Acin1|56215|apoptotic chromatin condensation inducer 1	AF124729|Acin1|56215|apoptotic chromatin condensation inducer 1	BC019127|Acin1|56215|apoptotic chromatin condensation inducer 1	BC094217|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_019567|Acin1|56215|apoptotic chromatin condensation inducer 1	AK012099|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085472|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr8_-_35171564_35171572	0.0999337	BPTF.p2	NM_011722|Dctn6|22428|dynactin 6
mm9_v1_chr3_-_107877497_107877529	0.0999047	BPTF.p2	AK192664|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr13_-_69672440_69672453	0.0997287	BPTF.p2	AK152550|Papd7|210106|PAP associated domain containing 7
mm9_v1_chr8_+_28164658_28164830	0.0994787	BPTF.p2	AK219818|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr16_-_38525341_38525620	0.0988863	BPTF.p2	AK076379|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr7_-_14840218_14840218	0.098724	BPTF.p2	BC147210|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	BC172008|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	NM_001081325|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
mm9_v1_chr4_+_143157369_143157377	0.0987129	BPTF.p2	NM_001007579|BC080695|329986|cDNA sequence BC080695	BC080695|BC080695|329986|cDNA sequence BC080695
mm9_v1_chr5_-_33972218_33972258	0.0986779	BPTF.p2	AK010537|Fam53a|74504|family with sequence similarity 53, member A	AK155077|Fam53a|74504|family with sequence similarity 53, member A	AK086386|Fam53a|74504|family with sequence similarity 53, member A	AK163326|Fam53a|74504|family with sequence similarity 53, member A
mm9_v1_chr11_-_5442157_5442220	0.098511	BPTF.p2	BC034558|Ccdc117|104479|coiled-coil domain containing 117	BC059888|Ccdc117|104479|coiled-coil domain containing 117	BC018601|Ccdc117|104479|coiled-coil domain containing 117	NM_134033|Ccdc117|104479|coiled-coil domain containing 117
mm9_v1_chr19_+_37281988_37282110	0.0984723	BPTF.p2	AK009364|March5|69104|membrane-associated ring finger (C3HC4) 5	NM_001164336|March5|69104|membrane-associated ring finger (C3HC4) 5	NM_001164337|March5|69104|membrane-associated ring finger (C3HC4) 5	NM_027314|March5|69104|membrane-associated ring finger (C3HC4) 5	AK009232|March5|69104|membrane-associated ring finger (C3HC4) 5	AK021403|March5|69104|membrane-associated ring finger (C3HC4) 5
mm9_v1_chr13_-_113971103_113971104	0.0982557	BPTF.p2	BC117981|Gzmk|14945|granzyme K	NM_008196|Gzmk|14945|granzyme K
mm9_v1_chrX_-_35022192_35022192	0.0982554	BPTF.p2	AJ972670|Rhox4f|636177|reproductive homeobox 4F	NM_001039696|Rhox4f|636177|reproductive homeobox 4F
mm9_v1_chr6_-_136870688_136870700	0.0976436	BPTF.p2	BC104406|Erp27|69187|endoplasmic reticulum protein 27	BC104407|Erp27|69187|endoplasmic reticulum protein 27	AK007684|Erp27|69187|endoplasmic reticulum protein 27	AK007800|Erp27|69187|endoplasmic reticulum protein 27	AK131830|Erp27|69187|endoplasmic reticulum protein 27	NM_026983|Erp27|69187|endoplasmic reticulum protein 27
mm9_v1_chr14_+_57021419_57021536	0.0973785	BPTF.p2	AF190166|Rnf17|30054|ring finger protein 17	AF285585|Rnf17|30054|ring finger protein 17	AY854010|Rnf17|30054|ring finger protein 17	AY854011|Rnf17|30054|ring finger protein 17	NM_001033043|Rnf17|30054|ring finger protein 17	AK136196|Rnf17|30054|ring finger protein 17
mm9_v1_chr8_-_3926756_3926840	0.0966252	BPTF.p2	AK007656|Cd209b|69165|CD209b antigen	AF374471|Cd209b|69165|CD209b antigen	NM_001037800|Cd209b|69165|CD209b antigen	AF424796|Cd209b|69165|CD209b antigen	AF424790|Cd209b|69165|CD209b antigen	AF424791|Cd209b|69165|CD209b antigen	AF424792|Cd209b|69165|CD209b antigen	AF424793|Cd209b|69165|CD209b antigen	AF424797|Cd209b|69165|CD209b antigen	AF424799|Cd209b|69165|CD209b antigen	AF422108|Cd209b|69165|CD209b antigen	AK138999|Cd209b|69165|CD209b antigen	NM_026972|Cd209b|69165|CD209b antigen	AF373409|Cd209b|69165|CD209b antigen	AF424795|Cd209b|69165|CD209b antigen	AF424794|Cd209b|69165|CD209b antigen	AF424798|Cd209b|69165|CD209b antigen	AF424803|Cd209b|69165|CD209b antigen
mm9_v1_chr8_+_125628943_125629025	0.0966111	BPTF.p2	
mm9_v1_chr11_-_106642684_106642809	0.0965656	BPTF.p2	AK149022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr2_-_143688908_143688908	0.096	BPTF.p2	BC057580|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94	NM_009751|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94
mm9_v1_chr6_+_119852710_119852793	0.0959438	BPTF.p2	NM_001166381|Rad52|19365|RAD52 homolog (S. cerevisiae)	NM_001166382|Rad52|19365|RAD52 homolog (S. cerevisiae)	NM_001166383|Rad52|19365|RAD52 homolog (S. cerevisiae)	NM_011236|Rad52|19365|RAD52 homolog (S. cerevisiae)	Z32767|Rad52|19365|RAD52 homolog (S. cerevisiae)	AK080702|Rad52|19365|RAD52 homolog (S. cerevisiae)	BC019123|Rad52|19365|RAD52 homolog (S. cerevisiae)	U12135|Rad52|19365|RAD52 homolog (S. cerevisiae)	BC010673|Rad52|19365|RAD52 homolog (S. cerevisiae)	U06837|Rad52|19365|RAD52 homolog (S. cerevisiae)
mm9_v1_chr1_-_128727208_128727208	0.0953767	BPTF.p2	NM_001081756|Nckap5|210356|NCK-associated protein 5	NM_176957|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr2_-_93997994_93998073	0.0950861	BPTF.p2	BC037620|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC090659|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC010749|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AF064635|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK076088|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK150849|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK152489|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK166027|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK081869|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK082715|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK088521|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK167908|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK078841|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	NM_019657|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12
mm9_v1_chr17_-_15512773_15512786	0.0950179	BPTF.p2	NM_007865|Dll1|13388|delta-like 1 (Drosophila)
mm9_v1_chr17_-_27327042_27327306	0.0942634	BPTF.p2	AK217086|Lemd2|224640|LEM domain containing 2	AK212367|Lemd2|224640|LEM domain containing 2
mm9_v1_chr3_+_88769733_88769733	0.0940428	BPTF.p2	NM_138679|Ash1l|192195|ash1 (absent, small, or homeotic)-like (Drosophila)
mm9_v1_chr17_+_18718690_18718690	0.093913	BPTF.p2	NM_001104547|Vmn2r96|433070|vomeronasal 2, receptor 96
mm9_v1_chr8_-_37676914_37676951	0.0937302	BPTF.p2	AK160715|Dlc1|50768|deleted in liver cancer 1	AF178078|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr2_-_63936044_63936094	0.0936091	BPTF.p2	AF263913|Fign|60344|fidgetin	AK163474|Fign|60344|fidgetin	AK164536|Fign|60344|fidgetin	NM_021716|Fign|60344|fidgetin	AK143787|Fign|60344|fidgetin	BC059266|Fign|60344|fidgetin
mm9_v1_chr4_+_116667905_116667941	0.0934628	BPTF.p2	AK163323|Hectd3|76608|HECT domain containing 3	AK165482|Hectd3|76608|HECT domain containing 3	AK154378|Hectd3|76608|HECT domain containing 3	AK139305|Hectd3|76608|HECT domain containing 3	AK051385|Hectd3|76608|HECT domain containing 3	AK155290|Hectd3|76608|HECT domain containing 3	AK155676|Hectd3|76608|HECT domain containing 3	AK170930|Hectd3|76608|HECT domain containing 3
mm9_v1_chr10_+_80644982_80645055	0.0933972	BPTF.p2	
mm9_v1_chr6_+_82352327_82352468	0.0932556	BPTF.p2	AK048680|Tacr1|21336|tachykinin receptor 1	BC075631|Tacr1|21336|tachykinin receptor 1	NM_009313|Tacr1|21336|tachykinin receptor 1
mm9_v1_chr7_-_147234897_147234986	0.092743	BPTF.p2	AB221640|Msx3|17703|homeobox, msh-like 3	BC051983|Msx3|17703|homeobox, msh-like 3	BC137577|Msx3|17703|homeobox, msh-like 3	BC137578|Msx3|17703|homeobox, msh-like 3	U62523|Msx3|17703|homeobox, msh-like 3	AK012208|Msx3|17703|homeobox, msh-like 3	AK012556|Msx3|17703|homeobox, msh-like 3	NM_010836|Msx3|17703|homeobox, msh-like 3
mm9_v1_chr6_+_128349783_128350065	0.0926332	BPTF.p2	AJ278170|Nrip2|60345|nuclear receptor interacting protein 2	NM_001162858|Nrip2|60345|nuclear receptor interacting protein 2	NM_021717|Nrip2|60345|nuclear receptor interacting protein 2	AK156526|Nrip2|60345|nuclear receptor interacting protein 2	AK134689|Nrip2|60345|nuclear receptor interacting protein 2	BC115523|Nrip2|60345|nuclear receptor interacting protein 2	BC094230|Nrip2|60345|nuclear receptor interacting protein 2
mm9_v1_chr2_+_30812810_30812845	0.0924412	BPTF.p2	AK011416|Tor1b|30934|torsin family 1, member B
mm9_v1_chr2_-_77118632_77118710	0.0922149	BPTF.p2	BC013245|Sestd1|228071|SEC14 and spectrin domains 1	AK047939|Sestd1|228071|SEC14 and spectrin domains 1	BC044853|Sestd1|228071|SEC14 and spectrin domains 1	NM_175465|Sestd1|228071|SEC14 and spectrin domains 1
mm9_v1_chr7_-_99889932_99889979	0.0921807	BPTF.p2	AK014157|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK051992|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK018467|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK019505|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084903|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084084|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK145781|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene
mm9_v1_chr11_-_120459646_120459770	0.092022	BPTF.p2	AJ252140|Thoc4|21681|THO complex 4	NM_011568|Thoc4|21681|THO complex 4	U89876|Thoc4|21681|THO complex 4	BC120588|Thoc4|21681|THO complex 4	BC137658|Thoc4|21681|THO complex 4
mm9_v1_chr9_-_57682040_57682040	0.0920081	BPTF.p2	AF116847|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	BC145330|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	BC150755|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)	NM_019689|Arid3b|56380|AT rich interactive domain 3B (BRIGHT-like)
mm9_v1_chr18_+_32399979_32400013	0.0919495	BPTF.p2	AK151188|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK152347|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK152988|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK154745|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	NM_133658|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	S71186|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC026575|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC022956|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC016595|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm9_v1_chr7_+_75097142_75097267	0.0913672	BPTF.p2	NM_010513|Igf1r|16001|insulin-like growth factor I receptor
mm9_v1_chr14_-_56853436_56853492	0.0909846	BPTF.p2	X12822|Gzmc|14940|granzyme C	BC120755|Gzmc|14940|granzyme C	BC120757|Gzmc|14940|granzyme C	BC145030|Gzmc|14940|granzyme C	M18459|Gzmc|14940|granzyme C	NM_010371|Gzmc|14940|granzyme C
mm9_v1_chr10_+_82329370_82329405	0.0909377	BPTF.p2	AK161275|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK161307|Eid3|66341|EP300 interacting inhibitor of differentiation 3	NM_025499|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK007194|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK006438|Eid3|66341|EP300 interacting inhibitor of differentiation 3	BC099545|Eid3|66341|EP300 interacting inhibitor of differentiation 3	AK132745|Eid3|66341|EP300 interacting inhibitor of differentiation 3
mm9_v1_chr8_-_123632191_123632278	0.0899827	BPTF.p2	BC023782|Mthfsd|234814|methenyltetrahydrofolate synthetase domain containing	AK141278|Mthfsd|234814|methenyltetrahydrofolate synthetase domain containing	AK083317|Mthfsd|234814|methenyltetrahydrofolate synthetase domain containing	BC052066|Mthfsd|234814|methenyltetrahydrofolate synthetase domain containing	NM_001166482|Mthfsd|234814|methenyltetrahydrofolate synthetase domain containing	NM_172761|Mthfsd|234814|methenyltetrahydrofolate synthetase domain containing
mm9_v1_chr18_+_36687800_36687810	0.0899439	BPTF.p2	AK143939|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085424|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK128930|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK142545|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085269|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	NM_172830|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113179|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113785|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9
mm9_v1_chr16_-_57071458_57071484	0.0898262	BPTF.p2	AK009173|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	NM_183281|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	BC150914|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	BC150924|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	BC172084|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	AK036849|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene
mm9_v1_chr3_+_89534639_89534732	0.0897628	BPTF.p2	NM_001146296|Adar|56417|adenosine deaminase, RNA-specific	NM_019655|Adar|56417|adenosine deaminase, RNA-specific	AK089451|Adar|56417|adenosine deaminase, RNA-specific	BC042505|Adar|56417|adenosine deaminase, RNA-specific	AF052506|Adar|56417|adenosine deaminase, RNA-specific	AF291050|Adar|56417|adenosine deaminase, RNA-specific	AF291875|Adar|56417|adenosine deaminase, RNA-specific	AF291876|Adar|56417|adenosine deaminase, RNA-specific	AF291877|Adar|56417|adenosine deaminase, RNA-specific	CT010323|Adar|56417|adenosine deaminase, RNA-specific
mm9_v1_chr17_-_24210437_24210453	0.089611	BPTF.p2	AK052960|Kctd5|69259|potassium channel tetramerisation domain containing 5	NM_027008|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chr14_-_59797556_59797585	0.0892248	BPTF.p2	BC099536|Gm5142|380907|predicted gene 5142	AK076969|Gm5142|380907|predicted gene 5142	NM_001004158|Gm5142|380907|predicted gene 5142
mm9_v1_chr4_-_95744206_95744236	0.0891859	BPTF.p2	AK165473|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK165469|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	BC016446|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK143981|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK165405|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK143903|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	NM_145548|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK162358|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13
mm9_v1_chr19_+_5026004_5026105	0.0888803	BPTF.p2	X86682|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2
mm9_v1_chr1_+_192748986_192748990	0.0883734	BPTF.p2	NM_001199020|Angel2|52477|angel homolog 2 (Drosophila)	AK135709|Angel2|52477|angel homolog 2 (Drosophila)	AK166619|Angel2|52477|angel homolog 2 (Drosophila)
mm9_v1_chr10_+_59569052_59569061	0.0877145	BPTF.p2	BC060210|Spock2|94214|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm9_v1_chr15_-_83953604_83953604	0.0874267	BPTF.p2	AK014771|Pnpla5|75772|patatin-like phospholipase domain containing 5	BC109360|Pnpla5|75772|patatin-like phospholipase domain containing 5	BC109361|Pnpla5|75772|patatin-like phospholipase domain containing 5	NM_029427|Pnpla5|75772|patatin-like phospholipase domain containing 5
mm9_v1_chr7_-_121261292_121261300	0.0872331	BPTF.p2	AK011419|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK078870|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	NM_025846|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2
mm9_v1_chr9_-_119118203_119118222	0.0870789	BPTF.p2	BC021449|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	AF529220|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	NM_133980|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13
mm9_v1_chr17_-_6492294_6492335	0.0870255	BPTF.p2	AK168478|Dynlt1c|100040563|dynein light chain Tctex-type 1C
mm9_v1_chr8_-_73034208_73034318	0.0861785	BPTF.p2	BC054413|Uba52|22186|ubiquitin A-52 residue ribosomal protein fusion product 1	BC014772|Uba52|22186|ubiquitin A-52 residue ribosomal protein fusion product 1	AK018726|Uba52|22186|ubiquitin A-52 residue ribosomal protein fusion product 1	BC086924|Uba52|22186|ubiquitin A-52 residue ribosomal protein fusion product 1	BC087922|Uba52|22186|ubiquitin A-52 residue ribosomal protein fusion product 1	NM_019883|Uba52|22186|ubiquitin A-52 residue ribosomal protein fusion product 1
mm9_v1_chr3_+_105707338_105707346	0.0859687	BPTF.p2	AK154312|Adora3|11542|adenosine A3 receptor	NM_009631|Adora3|11542|adenosine A3 receptor	AK013534|Adora3|11542|adenosine A3 receptor
mm9_v1_chr5_-_136674768_136674835	0.0859256	BPTF.p2	AK018438|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	BC027503|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	AK010359|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	AK088862|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	AK010961|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)	NM_025774|Prkrip1|66801|Prkr interacting protein 1 (IL11 inducible)
mm9_v1_chr1_-_154472199_154472354	0.0855349	BPTF.p2	BC017678|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	NM_016846|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	U14103|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK169109|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK169180|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1	AK144218|Rgl1|19731|ral guanine nucleotide dissociation stimulator,-like 1
mm9_v1_chr4_-_88204148_88204148	0.0854791	BPTF.p2	BC116216|Gm12597|242517|predicted gene 12597	NM_206870|Gm12597|242517|predicted gene 12597
mm9_v1_chr18_-_3299475_3299553	0.0851724	BPTF.p2	AK076797|Crem|12916|cAMP responsive element modulator	NM_001110853|Crem|12916|cAMP responsive element modulator	AK016156|Crem|12916|cAMP responsive element modulator	AK015641|Crem|12916|cAMP responsive element modulator
mm9_v1_chr2_+_130401908_130401945	0.0849539	BPTF.p2	AK003042|Oxt|18429|oxytocin	NM_011025|Oxt|18429|oxytocin	BC117030|Oxt|18429|oxytocin	BC117032|Oxt|18429|oxytocin	AF483508|Oxt|18429|oxytocin	AF483509|Oxt|18429|oxytocin
mm9_v1_chr1_+_165978346_165978413	0.0843831	BPTF.p2	AK153623|Sele|20339|selectin, endothelial cell	M87862|Sele|20339|selectin, endothelial cell	NM_011345|Sele|20339|selectin, endothelial cell	BC119083|Sele|20339|selectin, endothelial cell	BC120795|Sele|20339|selectin, endothelial cell
mm9_v1_chr4_+_89354888_89354955	0.0842379	BPTF.p2	AF542047|Dmrta1|242523|doublesex and mab-3 related transcription factor like family A1	NM_175647|Dmrta1|242523|doublesex and mab-3 related transcription factor like family A1	BC137613|Dmrta1|242523|doublesex and mab-3 related transcription factor like family A1
mm9_v1_chr7_-_91234908_91235022	0.0840839	BPTF.p2	BC116643|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	BC115873|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	AB103331|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	AK036809|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	AK162689|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	NM_030728|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene
mm9_v1_chr2_+_154839149_154839305	0.0838813	BPTF.p2	S70326|a|50518|nonagouti	L06451|a|50518|nonagouti	S70394|a|50518|nonagouti	L06941|a|50518|nonagouti	NM_015770|a|50518|nonagouti
mm9_v1_chr6_-_130015247_130015411	0.0837715	BPTF.p2	AY860975|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	AY860973|Klra33|654450|killer cell lectin-like receptor subfamily A member 33	L78247|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	NM_001039118|Klra33|654450|killer cell lectin-like receptor subfamily A member 33	AY971805|Klra18|93970|killer cell lectin-like receptor, subfamily A, member 18	AK145141|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	AF218078|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	AF218079|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	BC141242|Klra18|93970|killer cell lectin-like receptor, subfamily A, member 18
mm9_v1_chr11_+_54683756_54683778	0.0836817	BPTF.p2	
mm9_v1_chr10_-_25798768_25798857	0.0824516	BPTF.p2	AK048673|Tmem200a|77220|transmembrane protein 200A	AK173299|Tmem200a|77220|transmembrane protein 200A	NM_029881|Tmem200a|77220|transmembrane protein 200A
mm9_v1_chr3_-_108714578_108714667	0.0821356	BPTF.p2	BC050900|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	BC052077|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	NM_025845|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK015938|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK040788|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK159267|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	AK018126|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr4_-_141402189_141402273	0.081867	BPTF.p2	AK007772|Ctrc|76701|chymotrypsin C (caldecrin)	BC103715|Ctrc|76701|chymotrypsin C (caldecrin)	BC115516|Ctrc|76701|chymotrypsin C (caldecrin)	BC115517|Ctrc|76701|chymotrypsin C (caldecrin)	NM_001033875|Ctrc|76701|chymotrypsin C (caldecrin)
mm9_v1_chr14_-_56751384_56751444	0.0817621	BPTF.p2	BC141122|Gzmd|14941|granzyme D	BC145433|Gzmd|14941|granzyme D	BC145434|Gzmd|14941|granzyme D	AK131671|Gzmd|14941|granzyme D	NM_010372|Gzmd|14941|granzyme D	J03255|Gzmd|14941|granzyme D
mm9_v1_chr8_-_28338915_28339032	0.0805788	BPTF.p2	AF193027|Adrb3|11556|adrenergic receptor, beta 3	BC132000|Adrb3|11556|adrenergic receptor, beta 3
mm9_v1_chr18_+_78021267_78021344	0.0804705	BPTF.p2	
mm9_v1_chr7_+_3597085_3597155	0.0803009	BPTF.p2	BC060684|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC141041|Cnot3|232791|CCR4-NOT transcription complex, subunit 3	BC053437|Cnot3|232791|CCR4-NOT transcription complex, subunit 3
mm9_v1_chr5_-_86947601_86947624	0.0802239	BPTF.p2	BC118660|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	BC118611|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	AK036981|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	NM_177162|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene
mm9_v1_chr12_-_52849709_52849723	0.0798481	BPTF.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr11_+_120094240_120094260	0.0797291	BPTF.p2	AK147250|Bahcc1|268515|BAH domain and coiled-coil containing 1	NM_198423|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr11_+_104411976_104411976	0.0794741	BPTF.p2	BC048485|Myl4|17896|myosin, light polypeptide 4	NM_010858|Myl4|17896|myosin, light polypeptide 4
mm9_v1_chr3_+_129539656_129539716	0.079366	BPTF.p2	NM_007686|Cfi|12630|complement component factor i	U47810|Cfi|12630|complement component factor i	BC150751|Cfi|12630|complement component factor i
mm9_v1_chr18_+_35966147_35966251	0.078484	BPTF.p2	AK075844|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2
mm9_v1_chr19_-_10557362_10557417	0.0781539	BPTF.p2	BC118523|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AY032666|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	NM_133689|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK005821|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK016325|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene
mm9_v1_chr7_-_144506091_144506108	0.0781155	BPTF.p2	BC067018|Ebf3|13593|early B-cell factor 3
mm9_v1_chr12_+_78576551_78576710	0.0780994	BPTF.p2	AK188352|Fut8|53618|fucosyltransferase 8	AK210295|Fut8|53618|fucosyltransferase 8	AK216622|Fut8|53618|fucosyltransferase 8
mm9_v1_chr4_-_84320976_84320992	0.0780321	BPTF.p2	AK030323|Bnc2|242509|basonuclin 2	NM_172870|Bnc2|242509|basonuclin 2
mm9_v1_chr9_-_48719069_48719203	0.0779701	BPTF.p2	AY605711|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	AF513221|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	X72395|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	BC144799|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	BC145743|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	M74425|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	NM_001099644|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A	NM_013561|Htr3a|15561|5-hydroxytryptamine (serotonin) receptor 3A
mm9_v1_chr2_+_83564607_83564841	0.0776275	BPTF.p2	AK140647|Itgav|16410|integrin alpha V	AK080357|Itgav|16410|integrin alpha V	AK020674|Itgav|16410|integrin alpha V	AK149984|Itgav|16410|integrin alpha V	U14135|Itgav|16410|integrin alpha V	BC021600|Itgav|16410|integrin alpha V	BC133682|Itgav|16410|integrin alpha V
mm9_v1_chr4_-_116323979_116324063	0.077116	BPTF.p2	AK128906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK186333|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK192030|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK210646|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK219186|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK009462|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC003850|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr19_+_47938880_47939051	0.0769079	BPTF.p2	AK187657|Gsto1|14873|glutathione S-transferase omega 1	AK187708|Gsto1|14873|glutathione S-transferase omega 1	AK209032|Gsto1|14873|glutathione S-transferase omega 1
mm9_v1_chr9_-_106141043_106141044	0.0767064	BPTF.p2	BC004099|Alas1|11655|aminolevulinic acid synthase 1
mm9_v1_chr5_-_143005839_143006029	0.0766428	BPTF.p2	AB221598|Papolb|56522|poly (A) polymerase beta (testis specific)	AF039957|Papolb|56522|poly (A) polymerase beta (testis specific)	BC129896|Papolb|56522|poly (A) polymerase beta (testis specific)	BC129897|Papolb|56522|poly (A) polymerase beta (testis specific)	AB030729|Papolb|56522|poly (A) polymerase beta (testis specific)	NM_019943|Papolb|56522|poly (A) polymerase beta (testis specific)
mm9_v1_chr7_-_30875415_30875528	0.0766158	BPTF.p2	BC019790|Zfp566|72556|zinc finger protein 566	AK012367|Zfp566|72556|zinc finger protein 566	NM_152814|Zfp566|72556|zinc finger protein 566
mm9_v1_chr7_+_127821093_127821157	0.0765946	BPTF.p2	NM_001164580|BC030336|233812|cDNA sequence BC030336
mm9_v1_chr5_+_31357119_31357185	0.07638	BPTF.p2	BC053097|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	NM_023525|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	BC060119|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
mm9_v1_chr16_+_37539964_37540021	0.0760944	BPTF.p2	AK016099|Rabl3|67657|RAB, member of RAS oncogene family-like 3	NM_001042499|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK011280|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK028195|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK156982|Rabl3|67657|RAB, member of RAS oncogene family-like 3	AK028269|Rabl3|67657|RAB, member of RAS oncogene family-like 3	BC050194|Rabl3|67657|RAB, member of RAS oncogene family-like 3
mm9_v1_chr19_-_43598949_43599094	0.0758588	BPTF.p2	BC002057|Got1|14718|glutamate oxaloacetate transaminase 1, soluble	AK146445|Got1|14718|glutamate oxaloacetate transaminase 1, soluble	AK147934|Got1|14718|glutamate oxaloacetate transaminase 1, soluble	J02623|Got1|14718|glutamate oxaloacetate transaminase 1, soluble	AK147807|Got1|14718|glutamate oxaloacetate transaminase 1, soluble	NM_010324|Got1|14718|glutamate oxaloacetate transaminase 1, soluble
mm9_v1_chr5_-_125870386_125870439	0.0757965	BPTF.p2	NM_019639|Ubc|22190|ubiquitin C	AK004727|Ubc|22190|ubiquitin C
mm9_v1_chr5_-_115934305_115934492	0.0756853	BPTF.p2	AK016400|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	NM_001167691|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	BC022653|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	NM_133760|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)
mm9_v1_chr7_+_134356373_134356383	0.0755462	BPTF.p2	U77943|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle
mm9_v1_chrX_+_106029995_106030017	0.0753236	BPTF.p2	AK007586|2810403D21Rik|69964|RIKEN cDNA 2810403D21 gene	AK155344|2810403D21Rik|69964|RIKEN cDNA 2810403D21 gene	AK012972|2810403D21Rik|69964|RIKEN cDNA 2810403D21 gene
mm9_v1_chr2_+_162762650_162762674	0.0750608	BPTF.p2	
mm9_v1_chr5_+_88431549_88431605	0.0750439	BPTF.p2	NM_011422|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71629|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71631|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC035428|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC034553|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC055857|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031806|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC141243|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC145569|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031921|Smr3a|20599|submaxillary gland androgen regulated protein 3A
mm9_v1_chr12_-_15822792_15822800	0.0747709	BPTF.p2	AK080064|Trib2|217410|tribbles homolog 2 (Drosophila)	AK082329|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr4_-_129318264_129318285	0.0747157	BPTF.p2	AK150240|Txlna|109658|taxilin alpha	AK161649|Txlna|109658|taxilin alpha	AK171101|Txlna|109658|taxilin alpha	AK078192|Txlna|109658|taxilin alpha
mm9_v1_chr4_-_138313413_138313517	0.0746154	BPTF.p2	BC125567|Pla2g2f|26971|phospholipase A2, group IIF	AK029254|Pla2g2f|26971|phospholipase A2, group IIF	AF166099|Pla2g2f|26971|phospholipase A2, group IIF	NM_012045|Pla2g2f|26971|phospholipase A2, group IIF
mm9_v1_chr5_-_92792262_92792321	0.0744887	BPTF.p2	AK040051|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	BC025903|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF136449|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF178672|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF179872|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	NM_019494|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AK020750|Cxcl11|56066|chemokine (C-X-C motif) ligand 11
mm9_v1_chr9_+_65062496_65062582	0.0744448	BPTF.p2	AK133475|Parp16|214424|poly (ADP-ribose) polymerase family, member 16	NM_177460|Parp16|214424|poly (ADP-ribose) polymerase family, member 16	BC055447|Parp16|214424|poly (ADP-ribose) polymerase family, member 16	AK169866|Parp16|214424|poly (ADP-ribose) polymerase family, member 16
mm9_v1_chr8_-_75091078_75091201	0.0743733	BPTF.p2	
mm9_v1_chr1_+_180336011_180336163	0.074282	BPTF.p2	BC025062|Efcab2|68226|EF-hand calcium binding domain 2	NM_026626|Efcab2|68226|EF-hand calcium binding domain 2	AK018894|Efcab2|68226|EF-hand calcium binding domain 2	AK010880|Efcab2|68226|EF-hand calcium binding domain 2
mm9_v1_chr4_-_151412494_151412676	0.0740474	BPTF.p2	AF301161|Tas1r1|110326|taste receptor, type 1, member 1	AF301162|Tas1r1|110326|taste receptor, type 1, member 1	AY032622|Tas1r1|110326|taste receptor, type 1, member 1	AK153579|Tas1r1|110326|taste receptor, type 1, member 1	BC070448|Tas1r1|110326|taste receptor, type 1, member 1	NM_031867|Tas1r1|110326|taste receptor, type 1, member 1	AF337040|Tas1r1|110326|taste receptor, type 1, member 1
mm9_v1_chr16_-_17144301_17144301	0.0737702	BPTF.p2	BC050881|Ccdc116|76872|coiled-coil domain containing 116	NM_001164606|Ccdc116|76872|coiled-coil domain containing 116
mm9_v1_chr10_-_75905451_75905555	0.0733281	BPTF.p2	BC100380|Pcnt|18541|pericentrin (kendrin)	BC034865|Pcnt|18541|pericentrin (kendrin)	BC085244|Pcnt|18541|pericentrin (kendrin)	AK145315|Pcnt|18541|pericentrin (kendrin)	AB207233|Pcnt|18541|pericentrin (kendrin)
mm9_v1_chr3_+_92169108_92169139	0.0729773	BPTF.p2	AY158990|Sprr2f|20760|small proline-rich protein 2F	NM_011472|Sprr2f|20760|small proline-rich protein 2F	BC120756|Sprr2f|20760|small proline-rich protein 2F	BC120758|Sprr2f|20760|small proline-rich protein 2F
mm9_v1_chr12_+_105625371_105625401	0.0728736	BPTF.p2	NM_009253|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M	BC053337|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M	X55148|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M
mm9_v1_chr7_+_63495140_63495177	0.072864	BPTF.p2	M97900|Oca2|18431|oculocutaneous albinism II	NM_021879|Oca2|18431|oculocutaneous albinism II	AK051897|Oca2|18431|oculocutaneous albinism II	BC119220|Oca2|18431|oculocutaneous albinism II	BC120549|Oca2|18431|oculocutaneous albinism II	AK087494|Oca2|18431|oculocutaneous albinism II
mm9_v1_chr8_+_87356149_87356307	0.0726672	BPTF.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr6_-_106750030_106750092	0.0724759	BPTF.p2	AF229032|Crbn|58799|cereblon	BC069905|Crbn|58799|cereblon	BC033458|Crbn|58799|cereblon	BC086488|Crbn|58799|cereblon	AK032836|Crbn|58799|cereblon	AK075959|Crbn|58799|cereblon	AK141428|Crbn|58799|cereblon	AK076144|Crbn|58799|cereblon	AK077707|Crbn|58799|cereblon	AK160219|Crbn|58799|cereblon	AK050557|Crbn|58799|cereblon	NM_021449|Crbn|58799|cereblon	NM_175357|Crbn|58799|cereblon
mm9_v1_chr15_-_57309179_57309179	0.0723525	BPTF.p2	AK030222|BC026439|210463|cDNA sequence BC026439	NM_172378|BC026439|210463|cDNA sequence BC026439
mm9_v1_chr15_+_76173936_76173991	0.0720926	BPTF.p2	AK011288|Cyc1|66445|cytochrome c-1	NM_025567|Cyc1|66445|cytochrome c-1	AK151299|Cyc1|66445|cytochrome c-1	AK170272|Cyc1|66445|cytochrome c-1	BC005620|Cyc1|66445|cytochrome c-1	AK002815|Cyc1|66445|cytochrome c-1	BC082790|Cyc1|66445|cytochrome c-1
mm9_v1_chr15_+_84962507_84962603	0.0720132	BPTF.p2	AK017028|Ribc2|67747|RIB43A domain with coiled-coils 2	AK016311|Ribc2|67747|RIB43A domain with coiled-coils 2	NM_026357|Ribc2|67747|RIB43A domain with coiled-coils 2	AK006801|Ribc2|67747|RIB43A domain with coiled-coils 2	BC112373|Ribc2|67747|RIB43A domain with coiled-coils 2
mm9_v1_chr3_-_89767143_89767212	0.0719884	BPTF.p2	AK155736|Atp8b2|54667|ATPase, class I, type 8B, member 2
mm9_v1_chr10_-_77472501_77472567	0.0715692	BPTF.p2	NM_008826|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr8_+_71732923_71732973	0.0710278	BPTF.p2	NM_001013379|Zfp930|234358|zinc finger protein 930	AK040352|Zfp930|234358|zinc finger protein 930
mm9_v1_chr5_+_88314719_88314719	0.0706487	BPTF.p2	EF113909|Odam|69592|odontogenic, ameloblast asssociated	NM_027128|Odam|69592|odontogenic, ameloblast asssociated
mm9_v1_chr2_-_168780756_168780798	0.0696321	BPTF.p2	U49046|Zfp64|22722|zinc finger protein 64	AK012527|Zfp64|22722|zinc finger protein 64	BC004695|Zfp64|22722|zinc finger protein 64	AK146036|Zfp64|22722|zinc finger protein 64	AK010444|Zfp64|22722|zinc finger protein 64
mm9_v1_chrX_-_162917562_162917649	0.0693108	BPTF.p2	AK032133|Rab9|56382|RAB9, member RAS oncogene family	AK010710|Rab9|56382|RAB9, member RAS oncogene family	BC008160|Rab9|56382|RAB9, member RAS oncogene family	AK017301|Rab9|56382|RAB9, member RAS oncogene family	AB027290|Rab9|56382|RAB9, member RAS oncogene family	NM_019773|Rab9|56382|RAB9, member RAS oncogene family
mm9_v1_chr7_-_72017803_72017939	0.0693071	BPTF.p2	AF319979|Ndnl2|66647|necdin-like 2	BC034892|Ndnl2|66647|necdin-like 2	AK131157|Ndnl2|66647|necdin-like 2	AK010294|Ndnl2|66647|necdin-like 2	AK018250|Ndnl2|66647|necdin-like 2	BC092289|Ndnl2|66647|necdin-like 2	AK049759|Ndnl2|66647|necdin-like 2	AK076471|Ndnl2|66647|necdin-like 2	AK017727|Ndnl2|66647|necdin-like 2	NM_023239|Ndnl2|66647|necdin-like 2
mm9_v1_chr11_-_53244254_53244338	0.0692701	BPTF.p2	BC027809|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK007982|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK017907|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK002389|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK005374|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	BC028519|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	AK003160|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII	NM_025352|Uqcrq|22272|ubiquinol-cytochrome c reductase, complex III subunit VII
mm9_v1_chr11_-_102308910_102308956	0.0691638	BPTF.p2	BC025575|Fam171a2|217219|family with sequence similarity 171, member A2	BC064455|Fam171a2|217219|family with sequence similarity 171, member A2
mm9_v1_chr9_-_20703010_20703071	0.0689381	BPTF.p2	U70733|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	BC008511|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	NM_016876|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AF108214|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AK168362|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AK038249|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G
mm9_v1_chr7_+_52877180_52877296	0.0688418	BPTF.p2	AB195681|Izumo1|73456|izumo sperm-egg fusion 1	AK006830|Izumo1|73456|izumo sperm-egg fusion 1	NM_001018013|Izumo1|73456|izumo sperm-egg fusion 1	BC139270|Izumo1|73456|izumo sperm-egg fusion 1
mm9_v1_chr7_+_94395160_94395355	0.0685133	BPTF.p2	AK169304|Nox4|50490|NADPH oxidase 4	AK087097|Nox4|50490|NADPH oxidase 4	AF261944|Nox4|50490|NADPH oxidase 4	AF276957|Nox4|50490|NADPH oxidase 4	AK050371|Nox4|50490|NADPH oxidase 4	AK085509|Nox4|50490|NADPH oxidase 4	AK149398|Nox4|50490|NADPH oxidase 4	AK149455|Nox4|50490|NADPH oxidase 4	AK149492|Nox4|50490|NADPH oxidase 4	NM_015760|Nox4|50490|NADPH oxidase 4	AK052905|Nox4|50490|NADPH oxidase 4	AB041034|Nox4|50490|NADPH oxidase 4	AB042745|Nox4|50490|NADPH oxidase 4	AF218723|Nox4|50490|NADPH oxidase 4	BC138918|Nox4|50490|NADPH oxidase 4	BC145462|Nox4|50490|NADPH oxidase 4	BC021378|Nox4|50490|NADPH oxidase 4	EU861989|Nox4|50490|NADPH oxidase 4
mm9_v1_chr2_-_69550662_69550662	0.0682055	BPTF.p2	BC075689|Fastkd1|320720|FAST kinase domains 1	NM_177244|Fastkd1|320720|FAST kinase domains 1
mm9_v1_chr12_-_103057259_103057314	0.0677973	BPTF.p2	AK090129|Fbln5|23876|fibulin 5	NM_011812|Fbln5|23876|fibulin 5	AF112151|Fbln5|23876|fibulin 5	AK157936|Fbln5|23876|fibulin 5	AK159960|Fbln5|23876|fibulin 5	AK159471|Fbln5|23876|fibulin 5
mm9_v1_chr2_-_27940370_27940408	0.0673146	BPTF.p2	AF063217|Fcnb|14134|ficolin B	BC107220|Fcnb|14134|ficolin B	BC107221|Fcnb|14134|ficolin B	NM_010190|Fcnb|14134|ficolin B	AK151676|Fcnb|14134|ficolin B
mm9_v1_chr4_-_33335457_33335484	0.067305	BPTF.p2	AK159693|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK087995|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK160284|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr11_-_106649811_106649871	0.0672346	BPTF.p2	AK132779|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr2_-_80287218_80287228	0.0671898	BPTF.p2	AK019093|Frzb|20378|frizzled-related protein
mm9_v1_chr7_-_49703449_49703489	0.0671587	BPTF.p2	AK016864|4933421I07Rik|71162|RIKEN cDNA 4933421I07 gene	NM_027702|4933421I07Rik|71162|RIKEN cDNA 4933421I07 gene	BC147587|4933421I07Rik|71162|RIKEN cDNA 4933421I07 gene	BC147628|4933421I07Rik|71162|RIKEN cDNA 4933421I07 gene
mm9_v1_chr7_+_3425422_3425422	0.0662184	BPTF.p2	AF361348|Cacng6|54378|calcium channel, voltage-dependent, gamma subunit 6	BC115456|Cacng6|54378|calcium channel, voltage-dependent, gamma subunit 6	BC115457|Cacng6|54378|calcium channel, voltage-dependent, gamma subunit 6	NM_133183|Cacng6|54378|calcium channel, voltage-dependent, gamma subunit 6
mm9_v1_chr10_-_80129430_80129498	0.0660347	BPTF.p2	AK194912|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK189980|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK196822|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK202566|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK204946|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr18_+_37454493_37454629	0.0659875	BPTF.p2	NM_053127|Pcdhb2|93873|protocadherin beta 2	BC021789|Pcdhb2|93873|protocadherin beta 2	BC141154|Pcdhb2|93873|protocadherin beta 2	AY013781|Pcdhb2|93873|protocadherin beta 2
mm9_v1_chr11_-_65083442_65083498	0.0659702	BPTF.p2	AF384055|Myocd|214384|myocardin	AY303755|Myocd|214384|myocardin	NM_145136|Myocd|214384|myocardin	NM_146386|Myocd|214384|myocardin	AK142216|Myocd|214384|myocardin
mm9_v1_chr13_-_19789619_19789628	0.0656298	BPTF.p2	AF548543|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	AK006819|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	BC052356|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	NM_001167909|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	NM_181591|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)
mm9_v1_chr2_+_22924846_22924986	0.0654439	BPTF.p2	AK005001|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC061484|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr10_-_80664743_80664795	0.0652024	BPTF.p2	BC119244|Itgb1bp3|69564|integrin beta 1 binding protein 3	BC119246|Itgb1bp3|69564|integrin beta 1 binding protein 3	AK137483|Itgb1bp3|69564|integrin beta 1 binding protein 3	NM_027120|Itgb1bp3|69564|integrin beta 1 binding protein 3	AK009352|Itgb1bp3|69564|integrin beta 1 binding protein 3
mm9_v1_chr17_-_45705198_45705339	0.0649419	BPTF.p2	AK192311|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr3_-_94910762_94910779	0.0648871	BPTF.p2	BC031774|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	NM_008847|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr13_-_61459530_61459556	0.0648765	BPTF.p2	BC064740|Cts7|56092|cathepsin 7	NM_019539|Cts7|56092|cathepsin 7	BC050198|Cts7|56092|cathepsin 7	AK017466|Cts7|56092|cathepsin 7	AY014779|Cts7|56092|cathepsin 7
mm9_v1_chr9_+_5345475_5345506	0.064797	BPTF.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr11_-_72609306_72609347	0.0645028	BPTF.p2	BC086682|Cyb5d2|192986|cytochrome b5 domain containing 2	NM_001024926|Cyb5d2|192986|cytochrome b5 domain containing 2	AK142515|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr4_+_101927543_101927649	0.0643018	BPTF.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr11_+_119352933_119353046	0.0641973	BPTF.p2	NM_177394|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK170595|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK172181|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	BC056486|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK042626|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr5_+_44260035_44260114	0.0638498	BPTF.p2	AK150412|Cd38|12494|CD38 antigen	AK153215|Cd38|12494|CD38 antigen	AK151016|Cd38|12494|CD38 antigen	NM_007646|Cd38|12494|CD38 antigen	AK040498|Cd38|12494|CD38 antigen	AK038439|Cd38|12494|CD38 antigen	BC046312|Cd38|12494|CD38 antigen	AK042970|Cd38|12494|CD38 antigen	AK043442|Cd38|12494|CD38 antigen	AK151918|Cd38|12494|CD38 antigen	AK153334|Cd38|12494|CD38 antigen	L11332|Cd38|12494|CD38 antigen	CT010386|Cd38|12494|CD38 antigen
mm9_v1_chr19_+_34175422_34175462	0.0637341	BPTF.p2	AK019504|Lipm|78753|lipase, family member M	AK037091|Lipm|78753|lipase, family member M	NM_023903|Lipm|78753|lipase, family member M	AK037214|Lipm|78753|lipase, family member M	AK085719|Lipm|78753|lipase, family member M	BC031933|Lipm|78753|lipase, family member M
mm9_v1_chr4_-_142889312_142889356	0.0636209	BPTF.p2	M73748|Pdpn|14726|podoplanin	BC026551|Pdpn|14726|podoplanin
mm9_v1_chr12_-_11157647_11157647	0.0633927	BPTF.p2	AK162957|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_001168564|Kcns3|238076|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
mm9_v1_chr7_-_4965804_4965854	0.0633007	BPTF.p2	BC138231|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC138232|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC145207|Fiz1|23877|Flt3 interacting zinc finger protein 1	AF126747|Fiz1|23877|Flt3 interacting zinc finger protein 1	BC006633|Fiz1|23877|Flt3 interacting zinc finger protein 1	NM_011813|Fiz1|23877|Flt3 interacting zinc finger protein 1
mm9_v1_chr1_-_181448151_181448176	0.0630517	BPTF.p2	AK010447|Smyd3|69726|SET and MYND domain containing 3
mm9_v1_chr1_+_174306656_174306726	0.0630357	BPTF.p2	NM_026234|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK082746|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	BC005650|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK088117|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	BC083115|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK040397|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK044641|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK080242|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK018560|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK148197|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M
mm9_v1_chr11_+_29642667_29642710	0.0627309	BPTF.p2	
mm9_v1_chr2_+_172266042_172266209	0.0625042	BPTF.p2	AK053258|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK010321|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK077823|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	NM_025542|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK009901|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC049072|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK167287|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK028792|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC004803|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK219307|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK209674|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK169588|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK170141|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK153121|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC096692|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116442|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116443|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC127166|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr3_+_87723411_87723427	0.0623861	BPTF.p2	AK167623|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr6_-_130258378_130258378	0.0621323	BPTF.p2	AF074459|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF074463|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	NM_024470|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23
mm9_v1_chrX_-_25478166_25478166	0.0621038	BPTF.p2	BC099542|Gm5168|382275|predicted gene 5168	NM_001025607|Gm5168|382275|predicted gene 5168
mm9_v1_chr14_+_79826199_79826317	0.061629	BPTF.p2	AK135854|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	BC096019|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	NM_001024135|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7
mm9_v1_chr7_+_107685608_107685745	0.0612498	BPTF.p2	AK161506|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	NM_183270|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK019895|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK088786|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116995|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116997|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC096605|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK008883|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC048574|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8
mm9_v1_chr8_+_116657473_116657573	0.0601916	BPTF.p2	AK088191|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	NM_024437|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	NM_024446|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AF338424|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK004924|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	BC069843|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK011172|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	BC033046|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK008824|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm9_v1_chr18_+_56732519_56732526	0.0591899	BPTF.p2	NM_019996|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr13_-_21622917_21622982	0.0590845	BPTF.p2	BC050152|Zfp192|93681|zinc finger protein 192	AK032718|Zfp192|93681|zinc finger protein 192	AK134299|Zfp192|93681|zinc finger protein 192	NM_139141|Zfp192|93681|zinc finger protein 192
mm9_v1_chr8_+_19225477_19225477	0.0590586	BPTF.p2	AB063109|Defb6|116746|defensin beta 6	BC119422|Defb6|116746|defensin beta 6	BC119423|Defb6|116746|defensin beta 6	BC141871|Defb6|116746|defensin beta 6	BC141872|Defb6|116746|defensin beta 6	NM_054074|Defb6|116746|defensin beta 6
mm9_v1_chr5_+_34185760_34185844	0.058972	BPTF.p2	NM_001081102|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_001177884|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_175231|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	BC079668|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)
mm9_v1_chr4_+_135412061_135412061	0.0588005	BPTF.p2	AK169071|Srsf10|14105|serine/arginine-rich splicing factor 10
mm9_v1_chr10_+_99803471_99803471	0.058746	BPTF.p2	BC158090|Gm4303|100043231|predicted gene 4303	NM_001166638|Gm4303|100043231|predicted gene 4303	NM_001166639|Gm4305|100043235|predicted gene 4305	NM_001166641|Gm4307|100043239|predicted gene 4307
mm9_v1_chr3_+_88420058_88420079	0.0585631	BPTF.p2	AK158232|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr13_+_74075300_74075327	0.0582165	BPTF.p2	BC047372|Brd9|105246|bromodomain containing 9	BC057597|Brd9|105246|bromodomain containing 9	BC089379|Brd9|105246|bromodomain containing 9
mm9_v1_chr3_+_87723453_87723493	0.0580851	BPTF.p2	AK003362|Mrpl24|67707|mitochondrial ribosomal protein L24	AK019976|Mrpl24|67707|mitochondrial ribosomal protein L24	AK020157|Mrpl24|67707|mitochondrial ribosomal protein L24	NM_026591|Mrpl24|67707|mitochondrial ribosomal protein L24	AK013394|Mrpl24|67707|mitochondrial ribosomal protein L24	AK016190|Mrpl24|67707|mitochondrial ribosomal protein L24	BC031730|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chrX_+_146376197_146376197	0.0579798	BPTF.p2	NM_001122735|Gm15091|382244|predicted gene 15091	NM_001198987|Gm15097|434869|predicted gene 15097
mm9_v1_chr7_-_13404178_13404219	0.0577981	BPTF.p2	BC139021|Zfp329|67230|zinc finger protein 329	BC139023|Zfp329|67230|zinc finger protein 329	BC072665|Zfp329|67230|zinc finger protein 329	AK013271|Zfp329|67230|zinc finger protein 329	AK014562|Zfp329|67230|zinc finger protein 329	AK051535|Zfp329|67230|zinc finger protein 329	NM_026046|Zfp329|67230|zinc finger protein 329
mm9_v1_chr4_+_45310018_45310039	0.05762	BPTF.p2	AK011746|Rg9mtd3|69934|RNA (guanine-9-) methyltransferase domain containing 3	AK030465|Rg9mtd3|69934|RNA (guanine-9-) methyltransferase domain containing 3	NM_027266|Rg9mtd3|69934|RNA (guanine-9-) methyltransferase domain containing 3
mm9_v1_chr10_+_99813724_99813726	0.0573979	BPTF.p2	BC158099|Gm4302|100043227|predicted gene 4302	NM_001166634|Gm4302|100043227|predicted gene 4302	BC158090|Gm4303|100043231|predicted gene 4303	NM_001166638|Gm4303|100043231|predicted gene 4303	NM_001166639|Gm4305|100043235|predicted gene 4305	NM_001166641|Gm4307|100043239|predicted gene 4307
mm9_v1_chr11_-_4060222_4060295	0.0571777	BPTF.p2	AK076934|Ccdc157|216516|coiled-coil domain containing 157	AK143216|Ccdc157|216516|coiled-coil domain containing 157	AK220409|Ccdc157|216516|coiled-coil domain containing 157	AK133165|Ccdc157|216516|coiled-coil domain containing 157	NM_001164620|Ccdc157|216516|coiled-coil domain containing 157	NM_177616|Ccdc157|216516|coiled-coil domain containing 157
mm9_v1_chr8_-_19114830_19114832	0.0566274	BPTF.p2	AK020311|Defb12|77674|defensin beta 12	AB089182|Defb12|77674|defensin beta 12	NM_152802|Defb12|77674|defensin beta 12
mm9_v1_chr19_-_32423805_32423805	0.0565803	BPTF.p2	BC076618|Sgms1|208449|sphingomyelin synthase 1	NM_001168525|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr11_+_58731409_58731558	0.0561835	BPTF.p2	AK143638|Butr1|192194|butyrophilin related 1	AK029784|Butr1|192194|butyrophilin related 1	AF269232|Butr1|192194|butyrophilin related 1	NM_138678|Butr1|192194|butyrophilin related 1
mm9_v1_chr9_+_62189285_62189297	0.0560904	BPTF.p2	U73478|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr4_-_137882005_137882036	0.0560547	BPTF.p2	BC018561|Pink1|68943|PTEN induced putative kinase 1
mm9_v1_chr6_+_142246944_142246973	0.0559927	BPTF.p2	NM_010491|Iapp|15874|islet amyloid polypeptide	BC027527|Iapp|15874|islet amyloid polypeptide
mm9_v1_chr1_+_163899349_163899385	0.0558999	BPTF.p2	AK161117|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	AK170153|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	AK008524|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	AK014096|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	AK155971|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C	BC006938|Pigc|67292|phosphatidylinositol glycan anchor biosynthesis, class C
mm9_v1_chr3_+_95392855_95392908	0.0558842	BPTF.p2	NM_001177669|Golph3l|229593|golgi phosphoprotein 3-like	NM_001177670|Golph3l|229593|golgi phosphoprotein 3-like	NM_146133|Golph3l|229593|golgi phosphoprotein 3-like	BC047147|Golph3l|229593|golgi phosphoprotein 3-like	AK008434|Golph3l|229593|golgi phosphoprotein 3-like	AK089547|Golph3l|229593|golgi phosphoprotein 3-like	AK160454|Golph3l|229593|golgi phosphoprotein 3-like	AK169724|Golph3l|229593|golgi phosphoprotein 3-like	AK167675|Golph3l|229593|golgi phosphoprotein 3-like
mm9_v1_chr6_-_73419585_73419660	0.0556466	BPTF.p2	AK005631|4931417E11Rik|66740|RIKEN cDNA 4931417E11 gene	BC048456|4931417E11Rik|66740|RIKEN cDNA 4931417E11 gene	AK016460|4931417E11Rik|66740|RIKEN cDNA 4931417E11 gene	NM_025737|4931417E11Rik|66740|RIKEN cDNA 4931417E11 gene
mm9_v1_chrX_-_30292985_30293030	0.0556044	BPTF.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr7_-_35070627_35070627	0.0546067	BPTF.p2	AK076994|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene	NM_172741|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr8_+_34763709_34763709	0.0538837	BPTF.p2	BC056357|Gsr|14782|glutathione reductase	BC057325|Gsr|14782|glutathione reductase	NM_010344|Gsr|14782|glutathione reductase
mm9_v1_chr16_+_20717922_20717989	0.0538548	BPTF.p2	BC092087|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H
mm9_v1_chr10_+_80642896_80643136	0.0538223	BPTF.p2	AK210872|Eef2|13629|eukaryotic translation elongation factor 2	AK209228|Eef2|13629|eukaryotic translation elongation factor 2	AK202124|Eef2|13629|eukaryotic translation elongation factor 2	AK187806|Eef2|13629|eukaryotic translation elongation factor 2	AK193965|Eef2|13629|eukaryotic translation elongation factor 2	AK198543|Eef2|13629|eukaryotic translation elongation factor 2	AK199188|Eef2|13629|eukaryotic translation elongation factor 2	AK199799|Eef2|13629|eukaryotic translation elongation factor 2	AK203090|Eef2|13629|eukaryotic translation elongation factor 2	AK205853|Eef2|13629|eukaryotic translation elongation factor 2	AK207466|Eef2|13629|eukaryotic translation elongation factor 2	AK216165|Eef2|13629|eukaryotic translation elongation factor 2	AK216384|Eef2|13629|eukaryotic translation elongation factor 2	AK205723|Eef2|13629|eukaryotic translation elongation factor 2	AK164406|Eef2|13629|eukaryotic translation elongation factor 2	AK189872|Eef2|13629|eukaryotic translation elongation factor 2	AK195340|Eef2|13629|eukaryotic translation elongation factor 2	AK206829|Eef2|13629|eukaryotic translation elongation factor 2	AK207351|Eef2|13629|eukaryotic translation elongation factor 2	AK211185|Eef2|13629|eukaryotic translation elongation factor 2	AK217298|Eef2|13629|eukaryotic translation elongation factor 2	AK217627|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr12_+_109417947_109418052	0.0535366	BPTF.p2	NM_009832|Ccnk|12454|cyclin K	AK089386|Ccnk|12454|cyclin K	AK146711|Ccnk|12454|cyclin K	AK154765|Ccnk|12454|cyclin K	AK154679|Ccnk|12454|cyclin K	BC027297|Ccnk|12454|cyclin K
mm9_v1_chr12_+_10376776_10376849	0.0527547	BPTF.p2	NM_027588|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AK014892|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	BC060976|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AF356186|Nt5c1b|70881|5'-nucleotidase, cytosolic IB	AJ295253|Nt5c1b|70881|5'-nucleotidase, cytosolic IB
mm9_v1_chr10_-_99845190_99845193	0.052731	BPTF.p2	BC158090|Gm4303|100043231|predicted gene 4303	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr11_+_9018007_9018014	0.0526612	BPTF.p2	NM_001159401|Upp1|22271|uridine phosphorylase 1
mm9_v1_chr3_+_145600974_145601015	0.0523762	BPTF.p2	BC049577|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK010378|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	BC115465|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	NM_025555|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK019404|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK077565|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene
mm9_v1_chr6_-_24477665_24477717	0.0523106	BPTF.p2	AK019324|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019301|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	NM_026614|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr3_-_129525375_129525422	0.0522426	BPTF.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr19_-_56622636_56622751	0.0521367	BPTF.p2	AK029794|Dclre1a|55947|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)	BC076617|Dclre1a|55947|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm9_v1_chrX_+_30977792_30977837	0.0519706	BPTF.p2	NM_001168337|Gm2825|100040533|predicted gene 2825	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr4_+_140723459_140723541	0.0519153	BPTF.p2	AK020135|Fbxo42|213499|F-box protein 42
mm9_v1_chr17_-_56970332_56970435	0.0518865	BPTF.p2	AK017377|Rfx2|19725|regulatory factor X, 2 (influences HLA class II expression)	AK086559|Rfx2|19725|regulatory factor X, 2 (influences HLA class II expression)	X76089|Rfx2|19725|regulatory factor X, 2 (influences HLA class II expression)	AK044439|Rfx2|19725|regulatory factor X, 2 (influences HLA class II expression)	NM_009056|Rfx2|19725|regulatory factor X, 2 (influences HLA class II expression)	NM_027787|Rfx2|19725|regulatory factor X, 2 (influences HLA class II expression)	BC004654|Rfx2|19725|regulatory factor X, 2 (influences HLA class II expression)
mm9_v1_chr13_+_5860749_5860918	0.0516512	BPTF.p2	AK147904|Klf6|23849|Kruppel-like factor 6	AK053584|Klf6|23849|Kruppel-like factor 6	AK146615|Klf6|23849|Kruppel-like factor 6	BC020042|Klf6|23849|Kruppel-like factor 6	AK159420|Klf6|23849|Kruppel-like factor 6	AK144137|Klf6|23849|Kruppel-like factor 6	AK151769|Klf6|23849|Kruppel-like factor 6	AF072403|Klf6|23849|Kruppel-like factor 6
mm9_v1_chr17_-_45704908_45704999	0.0514394	BPTF.p2	
mm9_v1_chr1_+_44200032_44200079	0.0513699	BPTF.p2	AK088931|Bivm|246229|basic, immunoglobulin-like variable motif containing
mm9_v1_chr5_+_90947970_90948068	0.0511097	BPTF.p2	AK143987|Afm|280662|afamin	BC100597|Afm|280662|afamin	NM_145146|Afm|280662|afamin	BC026681|Afm|280662|afamin
mm9_v1_chr13_-_9764195_9764212	0.0509796	BPTF.p2	BC058999|Zmynd11|66505|zinc finger, MYND domain containing 11
mm9_v1_chr13_-_19487596_19487657	0.0509664	BPTF.p2	AK018331|Stard3nl|76205|STARD3 N-terminal like	AK152378|Stard3nl|76205|STARD3 N-terminal like	BC003334|Stard3nl|76205|STARD3 N-terminal like	NM_024270|Stard3nl|76205|STARD3 N-terminal like
mm9_v1_chr10_+_99798309_99798309	0.0508843	BPTF.p2	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr2_-_164653995_164654033	0.0507201	BPTF.p2	BC116354|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene	BC116355|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene	AK006145|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene	NM_029370|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene
mm9_v1_chr9_-_103595136_103595138	0.0506997	BPTF.p2	AK132350|Tmem108|81907|transmembrane protein 108
mm9_v1_chr5_-_124199380_124199422	0.0506462	BPTF.p2	BC008229|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK012697|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK077854|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK166941|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK168476|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK017771|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005523|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005525|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_025438|Rsrc2|208606|arginine/serine-rich coiled-coil 2
mm9_v1_chr3_+_107895985_107896200	0.0504754	BPTF.p2	BC016272|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	NM_008141|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131941|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131943|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC085102|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	L10666|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	AK009388|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2
mm9_v1_chr17_+_29090160_29090160	0.0504561	BPTF.p2	AK030202|Kctd20|66989|potassium channel tetramerisation domain containing 20	NM_025888|Kctd20|66989|potassium channel tetramerisation domain containing 20
mm9_v1_chr9_+_121807578_121807589	0.0497271	BPTF.p2	AK028281|Ccbp2|59289|chemokine binding protein 2	AK147166|Ccbp2|59289|chemokine binding protein 2	NM_021609|Ccbp2|59289|chemokine binding protein 2	AK145960|Ccbp2|59289|chemokine binding protein 2
mm9_v1_chr11_-_54798601_54798612	0.0497223	BPTF.p2	
mm9_v1_chr6_+_105627738_105627848	0.0494068	BPTF.p2	NM_001109749|Cntn4|269784|contactin 4	NM_173004|Cntn4|269784|contactin 4	AK036262|Cntn4|269784|contactin 4	BC115766|Cntn4|269784|contactin 4
mm9_v1_chr4_-_149575220_149575330	0.0493642	BPTF.p2	BC018582|Car6|12353|carbonic anhydrase 6	BC036270|Car6|12353|carbonic anhydrase 6	BC049973|Car6|12353|carbonic anhydrase 6	BC039657|Car6|12353|carbonic anhydrase 6	BC055437|Car6|12353|carbonic anhydrase 6	AK161216|Car6|12353|carbonic anhydrase 6	AK132599|Car6|12353|carbonic anhydrase 6	NM_009802|Car6|12353|carbonic anhydrase 6	AF079835|Car6|12353|carbonic anhydrase 6	BC006726|Car6|12353|carbonic anhydrase 6
mm9_v1_chr10_+_99823971_99823971	0.0493473	BPTF.p2	BC158090|Gm4303|100043231|predicted gene 4303	NM_001166638|Gm4303|100043231|predicted gene 4303	NM_001166639|Gm4305|100043235|predicted gene 4305	NM_001166641|Gm4307|100043239|predicted gene 4307
mm9_v1_chr13_+_49557301_49557363	0.0493445	BPTF.p2	AK007761|Ippk|75678|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
mm9_v1_chrX_-_31350951_31350996	0.0493156	BPTF.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001099333|Gm2863|100040606|predicted gene 2863
mm9_v1_chr15_-_85408499_85408499	0.0489919	BPTF.p2	BC066003|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_001163634|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr6_-_70868896_70868915	0.0487285	BPTF.p2	BC049736|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene	AK005862|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene	NM_028825|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene
mm9_v1_chr12_-_15823536_15823550	0.04866	BPTF.p2	BC037387|Trib2|217410|tribbles homolog 2 (Drosophila)	AK044747|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr11_+_73883671_73883671	0.048428	BPTF.p2	BC083001|Zfp616|327963|zinc finger protein 616	NM_001177570|Zfp616|327963|zinc finger protein 616
mm9_v1_chr2_-_150835067_150835133	0.048114	BPTF.p2	AK129253|Ninl|78177|ninein-like	BC067071|Ninl|78177|ninein-like	NM_207204|Ninl|78177|ninein-like
mm9_v1_chr4_-_109203808_109203901	0.0480145	BPTF.p2	AK005726|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	AK015869|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	BC125547|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	BC125549|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	AK019777|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene	NM_026291|4930522H14Rik|67646|RIKEN cDNA 4930522H14 gene
mm9_v1_chr10_+_98453513_98453709	0.04774	BPTF.p2	AK053569|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK042547|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr2_-_166888514_166888514	0.0475066	BPTF.p2	AK147564|Znfx1|98999|zinc finger, NFX1-type containing 1	AK147652|Znfx1|98999|zinc finger, NFX1-type containing 1	NM_001033196|Znfx1|98999|zinc finger, NFX1-type containing 1
mm9_v1_chr10_+_99808603_99808605	0.0473379	BPTF.p2	BC158099|Gm4302|100043227|predicted gene 4302	NM_001166634|Gm4302|100043227|predicted gene 4302	BC158090|Gm4303|100043231|predicted gene 4303	NM_001166638|Gm4303|100043231|predicted gene 4303	NM_001166639|Gm4305|100043235|predicted gene 4305	NM_001166641|Gm4307|100043239|predicted gene 4307
mm9_v1_chr5_+_125002866_125002933	0.0471643	BPTF.p2	AK154422|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_001190795|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_026409|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK167149|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK012782|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK077525|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK129402|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK033741|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117786|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117787|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC043052|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK017554|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
mm9_v1_chr1_+_36568707_36568722	0.047135	BPTF.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr13_-_26861883_26862033	0.047028	BPTF.p2	AF180109|Hdgfl1|15192|hepatoma derived growth factor-like 1	BC115593|Hdgfl1|15192|hepatoma derived growth factor-like 1	BC115594|Hdgfl1|15192|hepatoma derived growth factor-like 1	BC108388|Hdgfl1|15192|hepatoma derived growth factor-like 1	D63663|Hdgfl1|15192|hepatoma derived growth factor-like 1	AK133357|Hdgfl1|15192|hepatoma derived growth factor-like 1	NM_008232|Hdgfl1|15192|hepatoma derived growth factor-like 1
mm9_v1_chr7_+_120909509_120909519	0.0469978	BPTF.p2	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr15_+_80064503_80064578	0.0469175	BPTF.p2	AK163389|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	NM_178719|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK041184|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK038466|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK044773|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK050546|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK080375|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	BC094597|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)
mm9_v1_chr4_+_102242664_102242699	0.0468245	BPTF.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chrX_-_70535853_70535853	0.0465553	BPTF.p2	BC119509|Xlr5c|27084|X-linked lymphocyte-regulated 5C	NM_031493|Xlr5c|27084|X-linked lymphocyte-regulated 5C
mm9_v1_chr11_-_33478890_33478984	0.0464917	BPTF.p2	BC025550|Gabrp|216643|gamma-aminobutyric acid (GABA) A receptor, pi	BC027245|Gabrp|216643|gamma-aminobutyric acid (GABA) A receptor, pi	BC031196|Gabrp|216643|gamma-aminobutyric acid (GABA) A receptor, pi	BC023693|Gabrp|216643|gamma-aminobutyric acid (GABA) A receptor, pi	AK028946|Gabrp|216643|gamma-aminobutyric acid (GABA) A receptor, pi	NM_146017|Gabrp|216643|gamma-aminobutyric acid (GABA) A receptor, pi	AK160577|Gabrp|216643|gamma-aminobutyric acid (GABA) A receptor, pi
mm9_v1_chr8_-_95624574_95624626	0.0461909	BPTF.p2	
mm9_v1_chr8_+_109867910_109868036	0.0460939	BPTF.p2	
mm9_v1_chr15_-_77136972_77136997	0.0458324	BPTF.p2	AY904025|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr13_+_41744811_41744811	0.045398	BPTF.p2	AK037195|Gm5082|328231|predicted gene 5082	NM_177808|Gm5082|328231|predicted gene 5082
mm9_v1_chr2_+_129626252_129626487	0.0452226	BPTF.p2	NM_001038635|Stk35|67333|serine/threonine kinase 35	NM_183262|Stk35|67333|serine/threonine kinase 35	BC138904|Stk35|67333|serine/threonine kinase 35	BC138905|Stk35|67333|serine/threonine kinase 35	AK165988|Stk35|67333|serine/threonine kinase 35	AK006778|Stk35|67333|serine/threonine kinase 35
mm9_v1_chr5_+_31357245_31357300	0.045148	BPTF.p2	BC137856|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	BC144972|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase	BC144973|Cad|69719|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
mm9_v1_chr11_+_70338865_70338909	0.0449143	BPTF.p2	AK132042|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK078437|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167123|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167227|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	BC013897|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr2_+_113125888_113125897	0.0443222	BPTF.p2	BC050803|Tmco5b|75275|transmembrane and coiled-coil domains 5B	NM_029232|Tmco5b|75275|transmembrane and coiled-coil domains 5B	AK016214|Tmco5b|75275|transmembrane and coiled-coil domains 5B
mm9_v1_chr3_-_80606641_80606686	0.044115	BPTF.p2	AK044574|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK134572|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK086614|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK043490|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK141525|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr2_+_3253438_3253439	0.0437009	BPTF.p2	AK020348|Acbd7|78245|acyl-Coenzyme A binding domain containing 7	NM_030063|Acbd7|78245|acyl-Coenzyme A binding domain containing 7
mm9_v1_chr15_+_82282806_82282831	0.0433578	BPTF.p2	AK143963|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	NM_010006|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	BC094015|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	M23998|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	BC010593|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	M27168|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9
mm9_v1_chr12_+_87702066_87702202	0.0432902	BPTF.p2	AK052256|Esrrb|26380|estrogen related receptor, beta	NM_001159500|Esrrb|26380|estrogen related receptor, beta	BC132595|Esrrb|26380|estrogen related receptor, beta	BC132597|Esrrb|26380|estrogen related receptor, beta
mm9_v1_chr4_+_115769086_115769178	0.0431263	BPTF.p2	AK217820|Lrrc41|230654|leucine rich repeat containing 41
mm9_v1_chr9_-_114473486_114473486	0.0428596	BPTF.p2	DQ005956|Trim71|636931|tripartite motif-containing 71	NM_001042503|Trim71|636931|tripartite motif-containing 71
mm9_v1_chr8_-_96958065_96958186	0.042604	BPTF.p2	AK080381|9330175E14Rik|320377|RIKEN cDNA 9330175E14 gene	AK034303|9330175E14Rik|320377|RIKEN cDNA 9330175E14 gene
mm9_v1_chr1_+_173144098_173144105	0.0425906	BPTF.p2	AK133515|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	NM_009803|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr11_-_58266424_58266467	0.0424983	BPTF.p2	AK076838|4930504O13Rik|403200|RIKEN cDNA 4930504O13 gene	BC048595|4930504O13Rik|403200|RIKEN cDNA 4930504O13 gene	NM_207527|4930504O13Rik|403200|RIKEN cDNA 4930504O13 gene
mm9_v1_chr13_+_55815945_55816118	0.0423454	BPTF.p2	BC062180|Txndc15|69672|thioredoxin domain containing 15	NM_175150|Txndc15|69672|thioredoxin domain containing 15	AK160051|Txndc15|69672|thioredoxin domain containing 15	AK167838|Txndc15|69672|thioredoxin domain containing 15	AK167977|Txndc15|69672|thioredoxin domain containing 15	AK079517|Txndc15|69672|thioredoxin domain containing 15	AK009878|Txndc15|69672|thioredoxin domain containing 15	AK167701|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr11_+_4958024_4958308	0.0417498	BPTF.p2	AK008807|Rasl10a|75668|RAS-like, family 10, member A	AK044011|Rasl10a|75668|RAS-like, family 10, member A	NM_145216|Rasl10a|75668|RAS-like, family 10, member A	BC107200|Rasl10a|75668|RAS-like, family 10, member A	BC107201|Rasl10a|75668|RAS-like, family 10, member A	AF498251|Rasl10a|75668|RAS-like, family 10, member A
mm9_v1_chr17_+_28046196_28046431	0.0413184	BPTF.p2	BC050847|Anks1|224650|ankyrin repeat and SAM domain containing 1	NM_181413|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK129094|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK147273|Anks1|224650|ankyrin repeat and SAM domain containing 1
mm9_v1_chr2_+_145648290_145648325	0.0412556	BPTF.p2	AK151332|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr1_+_179374783_179374796	0.0411985	BPTF.p2	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr11_-_101036732_101036756	0.041055	BPTF.p2	AF215983|Ccr10|12777|chemokine (C-C motif) receptor 10	AF208238|Ccr10|12777|chemokine (C-C motif) receptor 10	AF215982|Ccr10|12777|chemokine (C-C motif) receptor 10	AK090044|Ccr10|12777|chemokine (C-C motif) receptor 10	BC117043|Ccr10|12777|chemokine (C-C motif) receptor 10	BC120542|Ccr10|12777|chemokine (C-C motif) receptor 10	NM_007721|Ccr10|12777|chemokine (C-C motif) receptor 10
mm9_v1_chr1_+_69873535_69873574	0.040518	BPTF.p2	AK015884|Spag16|66722|sperm associated antigen 16	BC120668|Spag16|66722|sperm associated antigen 16	BC145006|Spag16|66722|sperm associated antigen 16	AF490391|Spag16|66722|sperm associated antigen 16	NM_029160|Spag16|66722|sperm associated antigen 16	AK083083|Spag16|66722|sperm associated antigen 16
mm9_v1_chr8_-_44712538_44712623	0.0402987	BPTF.p2	NM_001025240|Gm5346|384813|predicted gene 5346	BC151154|Gm5346|384813|predicted gene 5346	BC157897|Gm5346|384813|predicted gene 5346
mm9_v1_chr8_-_88063071_88063191	0.0402487	BPTF.p2	
mm9_v1_chrX_-_3667391_3667436	0.0401775	BPTF.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr19_-_47044056_47044056	0.0401427	BPTF.p2	NM_001164365|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr17_-_22498323_22498380	0.0398449	BPTF.p2	BC090966|Zfp944|319615|zinc finger protein 944	AK033651|Zfp944|319615|zinc finger protein 944	AK031839|Zfp944|319615|zinc finger protein 944	AK167780|Zfp944|319615|zinc finger protein 944	NM_176962|Zfp944|319615|zinc finger protein 944	AK048043|Zfp944|319615|zinc finger protein 944
mm9_v1_chr5_-_106887184_106887184	0.0397231	BPTF.p2	AK053799|Barhl2|104382|BarH-like 2 (Drosophila)	NM_001005477|Barhl2|104382|BarH-like 2 (Drosophila)
mm9_v1_chr5_+_119010687_119010751	0.039583	BPTF.p2	AK088795|Med13l|76199|mediator complex subunit 13-like	NM_172424|Med13l|76199|mediator complex subunit 13-like	AK154895|Med13l|76199|mediator complex subunit 13-like	AY338464|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr15_+_7079540_7079643	0.0393924	BPTF.p2	AK155524|Lifr|16880|leukemia inhibitory factor receptor	AK145864|Lifr|16880|leukemia inhibitory factor receptor	NM_001113386|Lifr|16880|leukemia inhibitory factor receptor
mm9_v1_chr11_-_106077568_106077625	0.0392598	BPTF.p2	BC120502|Ccdc47|67163|coiled-coil domain containing 47	BC137681|Ccdc47|67163|coiled-coil domain containing 47	AK011882|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr7_+_141862431_141862467	0.0388494	BPTF.p2	AK195009|Dock1|330662|dedicator of cytokinesis 1
mm9_v1_chr16_+_57152994_57153228	0.0384697	BPTF.p2	BC025450|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK011763|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr13_+_28108080_28108091	0.0382958	BPTF.p2	AK141285|Prl4a1|19110|prolactin family 4, subfamily a, member 1	AK164009|Prl4a1|19110|prolactin family 4, subfamily a, member 1	BC052218|Prl4a1|19110|prolactin family 4, subfamily a, member 1	AF011383|Prl4a1|19110|prolactin family 4, subfamily a, member 1	AF015562|Prl4a1|19110|prolactin family 4, subfamily a, member 1	NM_011165|Prl4a1|19110|prolactin family 4, subfamily a, member 1
mm9_v1_chr1_-_59220232_59220232	0.0382001	BPTF.p2	AK044682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	NM_001164682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
mm9_v1_chr8_+_11834520_11834629	0.0379887	BPTF.p2	BC026704|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)
mm9_v1_chr11_+_68829412_68829631	0.0378805	BPTF.p2	NM_001013256|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	NM_001143790|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC072625|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC066078|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK145919|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK165906|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC147495|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	BC147497|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK044055|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK030876|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene	AK038651|1500010J02Rik|68964|RIKEN cDNA 1500010J02 gene
mm9_v1_chr10_+_99829132_99829132	0.0375989	BPTF.p2	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr7_+_16487010_16487010	0.0369339	BPTF.p2	AB472694|Egam-1c|100047130|Egam-1C	NM_001145190|Egam-1c|100047130|Egam-1C
mm9_v1_chr4_+_155336456_155336496	0.0367382	BPTF.p2	BC026939|Fam132a|67389|family with sequence similarity 132, member A
mm9_v1_chr4_-_142802606_142802625	0.0366123	BPTF.p2	AK087820|Prdm2|110593|PR domain containing 2, with ZNF domain	NM_001081355|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr4_-_118846774_118846793	0.0362855	BPTF.p2	BC108395|Zfp691|195522|zinc finger protein 691	AK170239|Zfp691|195522|zinc finger protein 691
mm9_v1_chr1_+_133534852_133534935	0.0361217	BPTF.p2	AK083315|Ctse|13034|cathepsin E	AK040175|Ctse|13034|cathepsin E	BC005432|Ctse|13034|cathepsin E	NM_007799|Ctse|13034|cathepsin E
mm9_v1_chr6_+_73226746_73226754	0.0359495	BPTF.p2	AK194483|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr12_+_25336138_25336389	0.0359278	BPTF.p2	AK038397|Klf11|194655|Kruppel-like factor 11	AK050156|Klf11|194655|Kruppel-like factor 11	NM_178357|Klf11|194655|Kruppel-like factor 11	BC060642|Klf11|194655|Kruppel-like factor 11	AK161233|Klf11|194655|Kruppel-like factor 11	AK082838|Klf11|194655|Kruppel-like factor 11	AK036618|Klf11|194655|Kruppel-like factor 11	AK089044|Klf11|194655|Kruppel-like factor 11	AK084913|Klf11|194655|Kruppel-like factor 11	AK085319|Klf11|194655|Kruppel-like factor 11	AK054170|Klf11|194655|Kruppel-like factor 11	AJ459773|Klf11|194655|Kruppel-like factor 11
mm9_v1_chr1_-_153275461_153275510	0.0357481	BPTF.p2	BC028449|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene	BC060204|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene	AK013686|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene	AK004803|1200016B10Rik|66875|RIKEN cDNA 1200016B10 gene
mm9_v1_chr10_-_76721815_76721967	0.0357295	BPTF.p2	AK164976|Gm10941|100169878|predicted gene 10941	AK132904|Gm10941|100169878|predicted gene 10941
mm9_v1_chr13_-_98669545_98669547	0.0353819	BPTF.p2	AK020332|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr2_-_142727172_142727216	0.0353425	BPTF.p2	NM_001081133|Kif16b|16558|kinesin family member 16B
mm9_v1_chrX_-_31752420_31752465	0.0350692	BPTF.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	NM_001145038|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr5_+_136455974_136455989	0.0350046	BPTF.p2	BC100745|Zp3|22788|zona pellucida glycoprotein 3	BC103583|Zp3|22788|zona pellucida glycoprotein 3	BC103584|Zp3|22788|zona pellucida glycoprotein 3	BC103585|Zp3|22788|zona pellucida glycoprotein 3	M20026|Zp3|22788|zona pellucida glycoprotein 3	NM_011776|Zp3|22788|zona pellucida glycoprotein 3	AK131934|Zp3|22788|zona pellucida glycoprotein 3	BC099465|Zp3|22788|zona pellucida glycoprotein 3
mm9_v1_chr9_+_21400165_21400200	0.0347795	BPTF.p2	
mm9_v1_chr10_-_12897796_12897828	0.0340601	BPTF.p2	AK015837|Fam164b|75122|family with sequence similarity 164, member B	BC137685|Fam164b|75122|family with sequence similarity 164, member B	BC144830|Fam164b|75122|family with sequence similarity 164, member B	NM_029172|Fam164b|75122|family with sequence similarity 164, member B
mm9_v1_chr3_-_92242684_92242702	0.0340308	BPTF.p2	X91825|Sprr1b|20754|small proline-rich protein 1B	BC119288|Sprr1b|20754|small proline-rich protein 1B	BC119290|Sprr1b|20754|small proline-rich protein 1B	AK003398|Sprr1b|20754|small proline-rich protein 1B	AK009752|Sprr1b|20754|small proline-rich protein 1B	NM_009265|Sprr1b|20754|small proline-rich protein 1B
mm9_v1_chr8_-_95603838_95603915	0.0335789	BPTF.p2	NM_001081372|Ces1b|382044|carboxylesterase 1B
mm9_v1_chr3_+_94176747_94176784	0.0334603	BPTF.p2	NM_011281|Rorc|19885|RAR-related orphan receptor gamma	AK160122|Rorc|19885|RAR-related orphan receptor gamma	BC014804|Rorc|19885|RAR-related orphan receptor gamma	U43508|Rorc|19885|RAR-related orphan receptor gamma
mm9_v1_chr15_-_76487319_76487388	0.0333093	BPTF.p2	BC062184|Cyhr1|54151|cysteine and histidine rich 1	BC082772|Cyhr1|54151|cysteine and histidine rich 1	AK080867|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr5_-_138181225_138181225	0.0332118	BPTF.p2	AB429289|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene	BC057372|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene	NM_175521|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene
mm9_v1_chr13_-_3944594_3944594	0.0331916	BPTF.p2	AK148451|Ucn3|83428|urocortin 3	NM_031250|Ucn3|83428|urocortin 3
mm9_v1_chr5_+_109058850_109059020	0.0331296	BPTF.p2	AK034579|Tmem175|72392|transmembrane protein 175	AK038865|Tmem175|72392|transmembrane protein 175	AK076446|Tmem175|72392|transmembrane protein 175	AK082765|Tmem175|72392|transmembrane protein 175	AK170273|Tmem175|72392|transmembrane protein 175	AK013879|Tmem175|72392|transmembrane protein 175	BC005542|Tmem175|72392|transmembrane protein 175
mm9_v1_chr19_+_9092973_9093058	0.033037	BPTF.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr13_+_21826902_21826964	0.0328176	BPTF.p2	BC139425|Hist1h4m|100041230|histone cluster 1, H4m	BC139437|Hist1h4m|100041230|histone cluster 1, H4m	AK010085|Hist1h4j|319159|histone cluster 1, H4j	NM_178210|Hist1h4j|319159|histone cluster 1, H4j
mm9_v1_chr9_+_14305055_14305063	0.0328066	BPTF.p2	NM_023153|Cwc15|66070|CWC15 homolog (S. cerevisiae)
mm9_v1_chr5_-_87355527_87355556	0.0327154	BPTF.p2	BC027200|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	NM_152811|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK004971|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK050435|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1
mm9_v1_chr2_+_70312979_70313222	0.0325525	BPTF.p2	AK036234|Sp5|64406|trans-acting transcription factor 5	NM_022435|Sp5|64406|trans-acting transcription factor 5	BC116691|Sp5|64406|trans-acting transcription factor 5	BC117505|Sp5|64406|trans-acting transcription factor 5	AF279479|Sp5|64406|trans-acting transcription factor 5
mm9_v1_chr18_+_75169426_75169445	0.0325441	BPTF.p2	
mm9_v1_chr10_+_59466074_59466139	0.0323272	BPTF.p2	AK139944|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	AK007519|Ascc1|69090|activating signal cointegrator 1 complex subunit 1
mm9_v1_chr2_-_7317513_7317626	0.0322771	BPTF.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chrX_-_160513980_160514094	0.032042	BPTF.p2	NM_009173|Siah1b|20438|seven in absentia 1B	Z19580|Siah1b|20438|seven in absentia 1B	BC052887|Siah1b|20438|seven in absentia 1B
mm9_v1_chr2_-_25316432_25316473	0.031905	BPTF.p2	AK046066|BC029214|227622|cDNA sequence BC029214
mm9_v1_chr10_-_127613494_127613534	0.0318533	BPTF.p2	BC021627|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	AB026583|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	AK207205|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	AK054482|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr7_-_116875215_116875245	0.0317527	BPTF.p2	AJ277605|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	AB046448|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104347|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104346|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	NM_020051|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)
mm9_v1_chrX_+_100688896_100688955	0.031646	BPTF.p2	AK148110|Enox|70252|expressed neighbor of Xist	AK137473|Enox|70252|expressed neighbor of Xist	AK007997|Enox|70252|expressed neighbor of Xist
mm9_v1_chr4_-_116324064_116324305	0.0315993	BPTF.p2	AF225564|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC046762|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011321|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011794|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK160185|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK005376|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK152086|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC039926|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011908|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK144198|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK168950|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011388|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011918|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK146081|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK159573|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK164461|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011667|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011856|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK146278|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AY207463|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	NM_021473|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr19_+_46576137_46576194	0.0315778	BPTF.p2	NM_053100|Trim8|93679|tripartite motif-containing 8	AK155303|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr16_-_11254052_11254466	0.0314374	BPTF.p2	BC031640|Gspt1|14852|G1 to S phase transition 1	AK030760|Gspt1|14852|G1 to S phase transition 1	AK032059|Gspt1|14852|G1 to S phase transition 1	AK148603|Gspt1|14852|G1 to S phase transition 1	AK134128|Gspt1|14852|G1 to S phase transition 1	AK037929|Gspt1|14852|G1 to S phase transition 1	AK166626|Gspt1|14852|G1 to S phase transition 1	NM_001130008|Gspt1|14852|G1 to S phase transition 1	NM_146066|Gspt1|14852|G1 to S phase transition 1
mm9_v1_chr10_-_62064997_62065070	0.0311729	BPTF.p2	BC060220|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	AK012125|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	BC043655|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	BC059237|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	AF159131|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	AK160095|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	AK145578|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	NM_019553|Ddx21|56200|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
mm9_v1_chr18_+_60685851_60685863	0.0309738	BPTF.p2	AK163240|Dctn4|67665|dynactin 4
mm9_v1_chrX_-_105011493_105011672	0.0307943	BPTF.p2	AK019383|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	BC016070|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	AK011297|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	NM_025921|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene
mm9_v1_chr15_+_9001154_9001214	0.0307495	BPTF.p2	BC115776|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr3_+_35653189_35653308	0.0305831	BPTF.p2	BC076603|Atp11b|76295|ATPase, class VI, type 11B
mm9_v1_chr1_+_87942437_87942543	0.0304412	BPTF.p2	BC137675|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	BC144821|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144992|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144993|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene
mm9_v1_chr16_-_48994193_48994207	0.0303446	BPTF.p2	AK039172|Dzip3|224170|DAZ interacting protein 3, zinc finger
mm9_v1_chr8_-_72149070_72149075	0.0302835	BPTF.p2	AK139223|Zfp868|234362|zinc finger protein 868	NM_001045553|Zfp868|234362|zinc finger protein 868
mm9_v1_chr14_-_69151731_69151797	0.0301144	BPTF.p2	AF013107|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK136692|Adam7|11500|a disintegrin and metallopeptidase domain 7	NM_007402|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK020312|Adam7|11500|a disintegrin and metallopeptidase domain 7
mm9_v1_chr11_-_119161194_119161425	0.0299979	BPTF.p2	AK201490|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK075920|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK157855|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK169350|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK168319|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK151786|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK153359|Eif4a3|192170|eukaryotic translation initiation factor 4A3	BC012862|Eif4a3|192170|eukaryotic translation initiation factor 4A3	BC008132|Eif4a3|192170|eukaryotic translation initiation factor 4A3	NM_138669|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK150277|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK152824|Eif4a3|192170|eukaryotic translation initiation factor 4A3	AK167107|Eif4a3|192170|eukaryotic translation initiation factor 4A3
mm9_v1_chr10_+_87323855_87324094	0.0299887	BPTF.p2	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr7_-_110401018_110401018	0.029973	BPTF.p2	AF393638|Dub2a|384701|deubiquitinating enzyme 2a	NM_001001559|Dub2a|384701|deubiquitinating enzyme 2a
mm9_v1_chr18_-_64676160_64676211	0.0299418	BPTF.p2	AK083730|Nars|70223|asparaginyl-tRNA synthetase	AK157244|Nars|70223|asparaginyl-tRNA synthetase	AK172657|Nars|70223|asparaginyl-tRNA synthetase	AK077699|Nars|70223|asparaginyl-tRNA synthetase	NM_001142950|Nars|70223|asparaginyl-tRNA synthetase	NM_027350|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr3_+_89856713_89856975	0.0298922	BPTF.p2	NM_025762|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	NM_027500|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK034749|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150324|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150423|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150831|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151002|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151263|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK017833|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC018438|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK051238|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC027190|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK214769|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AY533135|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chrX_-_35065833_35065833	0.0298845	BPTF.p2	AJ972671|Rhox4g|664608|reproductive homeobox 4G	NM_001039698|Rhox4g|664608|reproductive homeobox 4G
mm9_v1_chrX_-_146875443_146875447	0.0294522	BPTF.p2	NM_001164686|Tmem29|382245|transmembrane protein 29
mm9_v1_chr17_-_25998459_25998461	0.0294195	BPTF.p2	NM_001163766|Wdr90|106618|WD repeat domain 90
mm9_v1_chr6_-_30254273_30254567	0.029377	BPTF.p2	U19854|Ube2h|22214|ubiquitin-conjugating enzyme E2H	BC008517|Ube2h|22214|ubiquitin-conjugating enzyme E2H	AK131688|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001170345|Gm2058|100039133|predicted gene 2058	AK161414|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001169576|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_009459|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr10_-_41023009_41023070	0.0293467	BPTF.p2	AK169881|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK172341|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK172130|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK155392|Fig4|103199|FIG4 homolog (S. cerevisiae)	BC031887|Fig4|103199|FIG4 homolog (S. cerevisiae)	AK041196|Fig4|103199|FIG4 homolog (S. cerevisiae)	BC015295|Fig4|103199|FIG4 homolog (S. cerevisiae)	NM_133999|Fig4|103199|FIG4 homolog (S. cerevisiae)
mm9_v1_chr4_+_135051891_135051982	0.0289414	BPTF.p2	AK015061|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	AK019766|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	NM_030189|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	BC145657|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene
mm9_v1_chr9_+_110716497_110716530	0.0287785	BPTF.p2	AK006612|Prss44|73336|protease, serine, 44	NM_148940|Prss44|73336|protease, serine, 44	AB162857|Prss44|73336|protease, serine, 44	AB047758|Prss44|73336|protease, serine, 44
mm9_v1_chr12_-_86039703_86039802	0.0287468	BPTF.p2	AY993933|Tmem90a|627191|transmembrane protein 90a	AK140195|Tmem90a|627191|transmembrane protein 90a	NM_001033334|Tmem90a|627191|transmembrane protein 90a	AY993934|Tmem90a|627191|transmembrane protein 90a
mm9_v1_chr11_+_54911540_54911679	0.0286322	BPTF.p2	AK149642|Gm2a|14667|GM2 ganglioside activator protein	AK152256|Gm2a|14667|GM2 ganglioside activator protein	U09816|Gm2a|14667|GM2 ganglioside activator protein	BC004651|Gm2a|14667|GM2 ganglioside activator protein	NM_010299|Gm2a|14667|GM2 ganglioside activator protein	L19526|Gm2a|14667|GM2 ganglioside activator protein	CT010289|Gm2a|14667|GM2 ganglioside activator protein	AK179394|Gm2a|14667|GM2 ganglioside activator protein	AK181597|Gm2a|14667|GM2 ganglioside activator protein
mm9_v1_chr19_+_34682418_34682459	0.0285396	BPTF.p2	AK150632|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK151442|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK152620|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	NM_001005858|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK077243|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene
mm9_v1_chr8_+_48909835_48909835	0.0280867	BPTF.p2	AK008821|Cldn22|75677|claudin 22	NM_029383|Cldn22|75677|claudin 22
mm9_v1_chr5_-_20930494_20930494	0.0280164	BPTF.p2	AK015926|Ccdc146|75172|coiled-coil domain containing 146	NM_029195|Ccdc146|75172|coiled-coil domain containing 146
mm9_v1_chr15_-_79377170_79377216	0.0279115	BPTF.p2	BC096036|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	NM_001040187|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	NM_199080|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr3_-_88262982_88263022	0.0279052	BPTF.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr15_-_83197706_83197713	0.0273837	BPTF.p2	AK132681|1700001L05Rik|69291|RIKEN cDNA 1700001L05 gene	BC099567|1700001L05Rik|69291|RIKEN cDNA 1700001L05 gene
mm9_v1_chr19_+_39135495_39135572	0.0272052	BPTF.p2	NM_028191|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	AY227733|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC051089|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC118514|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC117531|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	AK008688|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65
mm9_v1_chr7_+_148641065_148641114	0.0270716	BPTF.p2	NM_001163689|Pnpla2|66853|patatin-like phospholipase domain containing 2	NM_025802|Pnpla2|66853|patatin-like phospholipase domain containing 2	AK002826|Pnpla2|66853|patatin-like phospholipase domain containing 2	AK085926|Pnpla2|66853|patatin-like phospholipase domain containing 2	AK150184|Pnpla2|66853|patatin-like phospholipase domain containing 2	AY510273|Pnpla2|66853|patatin-like phospholipase domain containing 2	AY731699|Pnpla2|66853|patatin-like phospholipase domain containing 2	BC064747|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chr11_+_83567248_83567345	0.0270503	BPTF.p2	AK050370|Heatr6|217026|HEAT repeat containing 6	AK149059|Heatr6|217026|HEAT repeat containing 6
mm9_v1_chr3_+_152377050_152377068	0.0266913	BPTF.p2	AK077893|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	NM_025662|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	NM_178016|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr13_-_23837389_23837470	0.026571	BPTF.p2	NM_175653|Hist1h3c|319148|histone cluster 1, H3c	BC120800|Hist1h3c|319148|histone cluster 1, H3c	BC120802|Hist1h3c|319148|histone cluster 1, H3c
mm9_v1_chr4_+_83171448_83171542	0.0264248	BPTF.p2	NM_001081012|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK170886|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK015166|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK029637|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK015563|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	AK041005|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	BC023323|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene	BC172165|4930473A06Rik|320226|RIKEN cDNA 4930473A06 gene
mm9_v1_chr9_-_105047257_105047411	0.0260804	BPTF.p2	FJ211595|1700080E11Rik|73532|RIKEN cDNA 1700080E11 gene	BC048436|1700080E11Rik|73532|RIKEN cDNA 1700080E11 gene	AK006953|1700080E11Rik|73532|RIKEN cDNA 1700080E11 gene	NM_028562|1700080E11Rik|73532|RIKEN cDNA 1700080E11 gene
mm9_v1_chr15_+_5135711_5135737	0.0260056	BPTF.p2	AK013464|Ttc33|67515|tetratricopeptide repeat domain 33	BC017533|Ttc33|67515|tetratricopeptide repeat domain 33	AK075643|Ttc33|67515|tetratricopeptide repeat domain 33
mm9_v1_chr11_+_87032504_87032509	0.0257988	BPTF.p2	AK004018|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr12_-_105282485_105282654	0.0257422	BPTF.p2	AY326419|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014346|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	BC062143|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014589|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_026535|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
mm9_v1_chr14_+_121325421_121325483	0.0254878	BPTF.p2	BC020012|Ipo5|70572|importin 5
mm9_v1_chr3_+_66789859_66789903	0.0252876	BPTF.p2	BC043045|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr1_-_121809744_121809749	0.025161	BPTF.p2	BC094344|Tmem177|66343|transmembrane protein 177	NM_175106|Tmem177|66343|transmembrane protein 177	AK009043|Tmem177|66343|transmembrane protein 177	AK076108|Tmem177|66343|transmembrane protein 177
mm9_v1_chr13_-_67522319_67522353	0.0251393	BPTF.p2	BC100389|Zfp459|328274|zinc finger protein 459	AK036923|Zfp459|328274|zinc finger protein 459	NM_177811|Zfp459|328274|zinc finger protein 459
mm9_v1_chr10_-_30375572_30375672	0.0243367	BPTF.p2	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr4_-_82666973_82667005	0.0242535	BPTF.p2	BC138427|Frem1|329872|Fras1 related extracellular matrix protein 1	BC145274|Frem1|329872|Fras1 related extracellular matrix protein 1	AJ616838|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_177863|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr6_+_34362333_34362371	0.0241134	BPTF.p2	AK147775|Akr1b7|11997|aldo-keto reductase family 1, member B7	NM_009731|Akr1b7|11997|aldo-keto reductase family 1, member B7	AK002705|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chr17_-_42829185_42829232	0.0240697	BPTF.p2	BC140980|Gpr115|78249|G protein-coupled receptor 115	AK019508|Gpr115|78249|G protein-coupled receptor 115	BC089564|Gpr115|78249|G protein-coupled receptor 115	NM_030067|Gpr115|78249|G protein-coupled receptor 115
mm9_v1_chr8_-_126383327_126383429	0.0233657	BPTF.p2	BC024705|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene	AK086180|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene
mm9_v1_chr4_-_118966829_118966902	0.0232976	BPTF.p2	AK188049|Ybx1|22608|Y box protein 1	AF038994|Ybx1|22608|Y box protein 1
mm9_v1_chr4_+_101390472_101390526	0.0231949	BPTF.p2	AK155891|Lepr|16847|leptin receptor	U58861|Lepr|16847|leptin receptor	U58862|Lepr|16847|leptin receptor	U58863|Lepr|16847|leptin receptor	AB519175|Lepr|16847|leptin receptor	AB519174|Lepr|16847|leptin receptor	AK140785|Lepr|16847|leptin receptor	U42467|Lepr|16847|leptin receptor	U46135|Lepr|16847|leptin receptor	AB519177|Lepr|16847|leptin receptor	AB519178|Lepr|16847|leptin receptor	AB519176|Lepr|16847|leptin receptor	BC082551|Lepr|16847|leptin receptor
mm9_v1_chr13_+_28234352_28234406	0.0223518	BPTF.p2	AK005447|Prl5a1|28078|prolactin family 5, subfamily a, member 1	NM_023746|Prl5a1|28078|prolactin family 5, subfamily a, member 1	BC051672|Prl5a1|28078|prolactin family 5, subfamily a, member 1	AF226611|Prl5a1|28078|prolactin family 5, subfamily a, member 1
mm9_v1_chr17_+_22099525_22099724	0.0217875	BPTF.p2	AK036434|Zfp943|74670|zinc finger prtoein 943	NM_001025373|Zfp943|74670|zinc finger prtoein 943	AK015297|Zfp943|74670|zinc finger prtoein 943	BC038865|Zfp943|74670|zinc finger prtoein 943	BC066031|Zfp943|74670|zinc finger prtoein 943
mm9_v1_chr9_-_20325813_20325863	0.0216142	BPTF.p2	BC048701|Zfp266|77519|zinc finger protein 266	BC061209|Zfp266|77519|zinc finger protein 266	AK081787|Zfp266|77519|zinc finger protein 266	AK019992|Zfp266|77519|zinc finger protein 266	BC089552|Zfp266|77519|zinc finger protein 266	NM_001082485|Zfp266|77519|zinc finger protein 266	NM_001135019|Zfp266|77519|zinc finger protein 266
mm9_v1_chrY_+_347036_347061	0.0210451	BPTF.p2	AK012186|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK153974|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AK009448|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	AJ006584|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC043656|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	NM_012011|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked	BC031450|Eif2s3y|26908|eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
mm9_v1_chr13_-_93962125_93962314	0.0203006	BPTF.p2	AK146086|Papd4|100715|PAP associated domain containing 4	BC016629|Papd4|100715|PAP associated domain containing 4	NM_133905|Papd4|100715|PAP associated domain containing 4
mm9_v1_chr6_-_23600205_23600304	0.0202152	BPTF.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr4_-_120689813_120689895	0.0198665	BPTF.p2	AK152757|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	BC032217|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	AK145042|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	BC031581|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	BC052413|Smap2|69780|stromal membrane-associated GTPase-activating protein 2	NM_133716|Smap2|69780|stromal membrane-associated GTPase-activating protein 2
mm9_v1_chrX_-_86655017_86655027	0.0197924	BPTF.p2	M95564|Pet2|18630|plasmacytoma expressed transcript 2	NM_008821|Pet2|18630|plasmacytoma expressed transcript 2
mm9_v1_chr15_+_81810969_81810980	0.0194333	BPTF.p2	AK006381|1700029P11Rik|66346|RIKEN cDNA 1700029P11 gene	AK006519|1700029P11Rik|66346|RIKEN cDNA 1700029P11 gene	AK007222|1700029P11Rik|66346|RIKEN cDNA 1700029P11 gene	NM_025503|1700029P11Rik|66346|RIKEN cDNA 1700029P11 gene	BC048460|1700029P11Rik|66346|RIKEN cDNA 1700029P11 gene
mm9_v1_chr12_+_73187085_73187131	0.0192473	BPTF.p2	AK009884|Jkamp|104771|JNK1/MAPK8-associated membrane protein	BC002238|Jkamp|104771|JNK1/MAPK8-associated membrane protein	NM_024205|Jkamp|104771|JNK1/MAPK8-associated membrane protein
mm9_v1_chr1_-_136443526_136443598	0.0189862	BPTF.p2	BC145149|4931440L10Rik|71001|RIKEN cDNA 4931440L10 gene	BC145786|4931440L10Rik|71001|RIKEN cDNA 4931440L10 gene	NM_001145300|4931440L10Rik|71001|RIKEN cDNA 4931440L10 gene
mm9_v1_chr7_+_31350445_31350445	0.01881	BPTF.p2	AK154129|Tmem149|101883|transmembrane protein 149	NM_145580|Tmem149|101883|transmembrane protein 149
mm9_v1_chr16_-_17144515_17144515	0.0187639	BPTF.p2	AK015290|Ccdc116|76872|coiled-coil domain containing 116	NM_029779|Ccdc116|76872|coiled-coil domain containing 116
mm9_v1_chr9_-_20297116_20297218	0.018168	BPTF.p2	AK036912|Zfp426|235028|zinc finger protein 426	AK048284|Zfp426|235028|zinc finger protein 426	BC023931|Zfp426|235028|zinc finger protein 426	BC024805|Zfp426|235028|zinc finger protein 426	AK220563|Zfp426|235028|zinc finger protein 426	AK085144|Zfp426|235028|zinc finger protein 426	NM_001110309|Zfp426|235028|zinc finger protein 426	NM_146221|Zfp426|235028|zinc finger protein 426
mm9_v1_chr8_+_86424565_86424613	0.017951	BPTF.p2	BC085138|Lphn1|330814|latrophilin 1
mm9_v1_chr1_-_193961641_193961894	0.0177357	BPTF.p2	BC138938|Rcor3|214742|REST corepressor 3	BC138939|Rcor3|214742|REST corepressor 3	BC145469|Rcor3|214742|REST corepressor 3	AK203210|Rcor3|214742|REST corepressor 3	BC057141|Rcor3|214742|REST corepressor 3	NM_144814|Rcor3|214742|REST corepressor 3	BC020065|Rcor3|214742|REST corepressor 3	AK135612|Rcor3|214742|REST corepressor 3	AK155440|Rcor3|214742|REST corepressor 3
mm9_v1_chr13_+_44826638_44826639	0.0177201	BPTF.p2	AK147226|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr3_+_51298674_51298675	0.0176956	BPTF.p2	AK038231|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr6_-_148893155_148893361	0.0175728	BPTF.p2	AK046519|Fam60a|56306|family with sequence similarity 60, member A
mm9_v1_chr16_-_94592095_94592172	0.0175214	BPTF.p2	NM_001159618|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chrX_+_150916544_150916544	0.0174499	BPTF.p2	AK016025|4930542N07Rik|75185|RIKEN cDNA 4930542N07 gene	NM_029199|4930542N07Rik|75185|RIKEN cDNA 4930542N07 gene
mm9_v1_chr7_-_30638635_30638689	0.0173445	BPTF.p2	AK132317|Zfp940|233057|zinc finger protein 940	AK139326|Zfp940|233057|zinc finger protein 940	BC027344|Zfp940|233057|zinc finger protein 940	NM_173738|Zfp940|233057|zinc finger protein 940	AK137204|Zfp940|233057|zinc finger protein 940	AK141787|Zfp940|233057|zinc finger protein 940
mm9_v1_chr2_+_145760519_145760551	0.0171974	BPTF.p2	AK019712|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK038772|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	NM_175280|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK086391|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107030|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107031|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC057361|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC058733|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene
mm9_v1_chr1_+_90097175_90097211	0.0166825	BPTF.p2	AY227195|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	AK002629|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	NM_013701|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	BC138676|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	BC145969|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	D87866|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2
mm9_v1_chr11_+_74644441_74644466	0.0166166	BPTF.p2	AK147933|Mnt|17428|max binding protein
mm9_v1_chr9_-_14304843_14304925	0.0161017	BPTF.p2	AK155227|Kdm4d|244694|lysine (K)-specific demethylase 4D	AK030020|Kdm4d|244694|lysine (K)-specific demethylase 4D	NM_173433|Kdm4d|244694|lysine (K)-specific demethylase 4D
mm9_v1_chr13_+_67964262_67964324	0.0160596	BPTF.p2	AK133011|BC048507|408058|cDNA sequence BC048507	BC048507|BC048507|408058|cDNA sequence BC048507	NM_001001185|BC048507|408058|cDNA sequence BC048507
mm9_v1_chr18_+_35989376_35989483	0.0159034	BPTF.p2	AK005364|Cxxc5|67393|CXXC finger 5	BC089314|Cxxc5|67393|CXXC finger 5	NM_133687|Cxxc5|67393|CXXC finger 5
mm9_v1_chr6_+_115310883_115310968	0.0157506	BPTF.p2	U01841|Pparg|19016|peroxisome proliferator activated receptor gamma
mm9_v1_chr5_-_139821054_139821222	0.0157216	BPTF.p2	AK148526|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK007984|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC031792|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_197980|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK002486|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK013260|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK003697|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK013289|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr13_-_29043617_29043693	0.0153942	BPTF.p2	AK051540|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr16_-_85901362_85901374	0.0153212	BPTF.p2	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr3_+_55046579_55046645	0.015299	BPTF.p2	BC133685|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr4_+_101390011_101390043	0.0151768	BPTF.p2	NM_001122899|Lepr|16847|leptin receptor	NM_010704|Lepr|16847|leptin receptor	NM_146146|Lepr|16847|leptin receptor	U52915|Lepr|16847|leptin receptor
mm9_v1_chr4_-_124742875_124742900	0.0150888	BPTF.p2	BC118619|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	BC122552|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	AK077109|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1	NM_175223|Dnali1|75563|dynein, axonemal, light intermediate polypeptide 1
mm9_v1_chr14_-_34260308_34260313	0.0150669	BPTF.p2	BC053027|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chrX_+_20126893_20126943	0.0150459	BPTF.p2	AK146465|Rgn|19733|regucalcin	BC012710|Rgn|19733|regucalcin	NM_009060|Rgn|19733|regucalcin	U28937|Rgn|19733|regucalcin
mm9_v1_chr8_+_63703064_63703069	0.0148066	BPTF.p2	AF030131|Sh3rf1|59009|SH3 domain containing ring finger 1
mm9_v1_chr1_+_89967340_89967428	0.0145868	BPTF.p2	NM_201644|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	AY227200|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC138699|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC146021|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC019434|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	L27122|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	S57479|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9
mm9_v1_chr13_+_67033746_67033766	0.0144609	BPTF.p2	AK085857|Ptdss1|19210|phosphatidylserine synthase 1	NM_008959|Ptdss1|19210|phosphatidylserine synthase 1
mm9_v1_chr4_+_94260340_94260340	0.0143599	BPTF.p2	NM_001081019|Gm12657|667250|predicted gene 12657
mm9_v1_chr19_-_11893333_11893421	0.014296	BPTF.p2	D29799|Stx3|20908|syntaxin 3	NM_011502|Stx3|20908|syntaxin 3	AK038415|Stx3|20908|syntaxin 3	AK133830|Stx3|20908|syntaxin 3
mm9_v1_chr3_-_115417685_115417834	0.0141827	BPTF.p2	BC051023|S1pr1|13609|sphingosine-1-phosphate receptor 1	AK146501|S1pr1|13609|sphingosine-1-phosphate receptor 1
mm9_v1_chr14_-_55036515_55036535	0.0141766	BPTF.p2	AJ130943|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AK150950|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AK151718|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	NM_011405|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm9_v1_chr19_+_60965651_60965651	0.0141613	BPTF.p2	AK135076|Grk5|14773|G protein-coupled receptor kinase 5	NM_018869|Grk5|14773|G protein-coupled receptor kinase 5
mm9_v1_chr1_+_174886898_174886898	0.0140451	BPTF.p2	BC119298|Olfr16|18313|olfactory receptor 16	BC119300|Olfr16|18313|olfactory receptor 16	NM_008763|Olfr16|18313|olfactory receptor 16
mm9_v1_chr6_-_13788580_13788612	0.0139814	BPTF.p2	AK047740|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr5_-_121995889_121995900	0.0139383	BPTF.p2	AF039840|Mapkapk5|17165|MAP kinase-activated protein kinase 5	NM_010765|Mapkapk5|17165|MAP kinase-activated protein kinase 5
mm9_v1_chr1_+_136312291_136312502	0.0137086	BPTF.p2	AK143680|Adipor1|72674|adiponectin receptor 1	AK181422|Adipor1|72674|adiponectin receptor 1
mm9_v1_chr16_-_20425991_20426058	0.0135858	BPTF.p2	AK050565|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr11_-_97637190_97637231	0.0135629	BPTF.p2	AK005619|1700001P01Rik|72215|RIKEN cDNA 1700001P01 gene	BC048607|1700001P01Rik|72215|RIKEN cDNA 1700001P01 gene	NM_028156|1700001P01Rik|72215|RIKEN cDNA 1700001P01 gene
mm9_v1_chr11_+_20346399_20346399	0.0135588	BPTF.p2	NM_001195717|Gm12034|382492|predicted gene 12034
mm9_v1_chr1_+_138364511_138364534	0.0133531	BPTF.p2	BC158132|Kif14|381293|kinesin family member 14	NM_001081258|Kif14|381293|kinesin family member 14
mm9_v1_chr11_-_115465172_115465241	0.0132476	BPTF.p2	BC056424|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	BC110676|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	AK082327|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	AK147882|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	AK132183|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	AK031086|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	AK122212|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	BC085617|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3	NM_173048|Gga3|260302|golgi associated, gamma adaptin ear containing, ARF binding protein 3
mm9_v1_chr15_+_32107043_32107046	0.0132206	BPTF.p2	BC111811|Tas2r119|57254|taste receptor, type 2, member 119	BC128079|Tas2r119|57254|taste receptor, type 2, member 119	BC152359|Tas2r119|57254|taste receptor, type 2, member 119	NM_020503|Tas2r119|57254|taste receptor, type 2, member 119	BC128078|Tas2r119|57254|taste receptor, type 2, member 119
mm9_v1_chr7_-_52972399_52972455	0.0130052	BPTF.p2	AK154321|Sphk2|56632|sphingosine kinase 2	BC006941|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr4_-_55545211_55545278	0.0127842	BPTF.p2	BC010301|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr14_-_60705571_60705718	0.0127639	BPTF.p2	BC137896|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	AF156550|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	NM_015803|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	AK051437|Atp8a2|50769|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm9_v1_chr2_+_28980511_28980658	0.0122571	BPTF.p2	AK044730|Setx|269254|senataxin	NM_198033|Setx|269254|senataxin
mm9_v1_chr4_+_33118447_33118538	0.0122457	BPTF.p2	BC024623|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK003050|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AJ245899|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK149985|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1	AK031669|Ube2j1|56228|ubiquitin-conjugating enzyme E2, J1
mm9_v1_chr9_+_108393149_108393235	0.0119705	BPTF.p2	AK043088|Usp19|71472|ubiquitin specific peptidase 19	AK171942|Usp19|71472|ubiquitin specific peptidase 19	AK146504|Usp19|71472|ubiquitin specific peptidase 19	AK160807|Usp19|71472|ubiquitin specific peptidase 19	AK159473|Usp19|71472|ubiquitin specific peptidase 19
mm9_v1_chr10_-_81090064_81090088	0.0115148	BPTF.p2	AK145929|Sirt6|50721|sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)	NM_001163430|Sirt6|50721|sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)
mm9_v1_chr18_-_34166859_34166859	0.0112733	BPTF.p2	NM_013512|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr4_-_120997521_120997521	0.0112111	BPTF.p2	AK136549|Gm12888|545677|predicted gene 12888	BC150899|Gm12888|545677|predicted gene 12888	NM_001033791|Gm12888|545677|predicted gene 12888
mm9_v1_chr6_-_129863199_129863241	0.0111701	BPTF.p2	BC120550|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	BC137708|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF247643|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	NM_008463|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	U10091|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5
mm9_v1_chr19_+_31943250_31943302	0.0110231	BPTF.p2	NM_001081074|A1cf|69865|APOBEC1 complementation factor	AY566862|A1cf|69865|APOBEC1 complementation factor	AY566863|A1cf|69865|APOBEC1 complementation factor	AY566864|A1cf|69865|APOBEC1 complementation factor	AK007970|A1cf|69865|APOBEC1 complementation factor	BC089622|A1cf|69865|APOBEC1 complementation factor
mm9_v1_chr3_-_88262805_88262805	0.0109957	BPTF.p2	NM_001163491|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr7_+_107422781_107422864	0.0109421	BPTF.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr13_-_114453813_114453883	0.0106327	BPTF.p2	BC092376|Hspb3|56534|heat shock protein 3	AF203375|Hspb3|56534|heat shock protein 3	BC065388|Hspb3|56534|heat shock protein 3	AK009633|Hspb3|56534|heat shock protein 3	NM_019960|Hspb3|56534|heat shock protein 3
mm9_v1_chr15_+_75098850_75098850	0.0106024	BPTF.p2	NM_008530|Ly6f|17071|lymphocyte antigen 6 complex, locus F
mm9_v1_chr13_+_31898612_31898654	0.0105425	BPTF.p2	AK144420|Foxc1|17300|forkhead box C1
mm9_v1_chr6_+_41797547_41797583	0.0104505	BPTF.p2	AK138795|Pip|18716|prolactin induced protein	NM_008843|Pip|18716|prolactin induced protein	S73282|Pip|18716|prolactin induced protein	X02510|Pip|18716|prolactin induced protein	BC028889|Pip|18716|prolactin induced protein	AB017907|Pip|18716|prolactin induced protein	BC018264|Pip|18716|prolactin induced protein
mm9_v1_chr5_-_115750649_115750671	0.0104197	BPTF.p2	BC085492|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr18_+_47009692_47009701	0.010287	BPTF.p2	AK014652|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene	NM_029008|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene	BC113158|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene
mm9_v1_chr5_-_33972265_33972318	0.0102801	BPTF.p2	AK017321|Fam53a|74504|family with sequence similarity 53, member A	NM_178390|Fam53a|74504|family with sequence similarity 53, member A
mm9_v1_chr2_+_91493364_91493364	0.0102549	BPTF.p2	AK084622|Arhgap1|228359|Rho GTPase activating protein 1	NM_146124|Arhgap1|228359|Rho GTPase activating protein 1
mm9_v1_chr17_-_23701088_23701089	0.010212	BPTF.p2	AK133902|Zfp213|449521|zinc finger protein 213
mm9_v1_chrX_+_30732633_30732678	0.0100958	BPTF.p2	NM_001168334|Gm2799|100040482|predicted gene 2799	NM_027955|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr17_-_40379205_40379215	0.0100483	BPTF.p2	BC132536|Crisp3|11572|cysteine-rich secretory protein 3	BC132538|Crisp3|11572|cysteine-rich secretory protein 3	L05560|Crisp3|11572|cysteine-rich secretory protein 3	NM_009639|Crisp3|11572|cysteine-rich secretory protein 3	BC114345|Crisp3|11572|cysteine-rich secretory protein 3	M92850|Crisp3|11572|cysteine-rich secretory protein 3	BC022573|Crisp3|11572|cysteine-rich secretory protein 3
mm9_v1_chr5_-_110698874_110698881	0.00983686	BPTF.p2	AK049246|Pgam5|72542|phosphoglycerate mutase family member 5	AK169643|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chrX_+_154137114_154137143	0.00972666	BPTF.p2	BC051197|Smpx|66106|small muscle protein, X-linked	BC061051|Smpx|66106|small muscle protein, X-linked
mm9_v1_chr7_-_52973262_52973371	0.00968207	BPTF.p2	AK146414|Sphk2|56632|sphingosine kinase 2	AK151990|Sphk2|56632|sphingosine kinase 2	BC053737|Sphk2|56632|sphingosine kinase 2	AF245448|Sphk2|56632|sphingosine kinase 2	NM_001172561|Sphk2|56632|sphingosine kinase 2	NM_203280|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr3_+_89006824_89006905	0.00968138	BPTF.p2	AK082767|Gba|14466|glucosidase, beta, acid	NM_001077411|Gba|14466|glucosidase, beta, acid	AK201806|Gba|14466|glucosidase, beta, acid	AK166198|Gba|14466|glucosidase, beta, acid	BC006663|Gba|14466|glucosidase, beta, acid	NM_008094|Gba|14466|glucosidase, beta, acid	AK152745|Gba|14466|glucosidase, beta, acid
mm9_v1_chr11_-_22882120_22882303	0.00958535	BPTF.p2	AK147766|Commd1|17846|COMM domain containing 1	BC030052|Commd1|17846|COMM domain containing 1	BC038641|Commd1|17846|COMM domain containing 1	D85430|Commd1|17846|COMM domain containing 1	BC051210|Commd1|17846|COMM domain containing 1	AK082909|Commd1|17846|COMM domain containing 1	AK133507|Commd1|17846|COMM domain containing 1	BC132083|Commd1|17846|COMM domain containing 1	BC132085|Commd1|17846|COMM domain containing 1	AB104816|Commd1|17846|COMM domain containing 1	NM_144514|Commd1|17846|COMM domain containing 1
mm9_v1_chr9_-_21043375_21043438	0.00944925	BPTF.p2	AK046178|Keap1|50868|kelch-like ECH-associated protein 1	AB020063|Keap1|50868|kelch-like ECH-associated protein 1	AK039549|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr7_+_151009071_151009071	0.00930737	BPTF.p2	AJ307059|Dhcr7|13360|7-dehydrocholesterol reductase	NM_007856|Dhcr7|13360|7-dehydrocholesterol reductase
mm9_v1_chr12_+_33832641_33832680	0.00911641	BPTF.p2	AK013145|Atxn7l1|380753|ataxin 7-like 1	BC100598|Atxn7l1|380753|ataxin 7-like 1	BC017546|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr4_+_154243693_154243744	0.00893694	BPTF.p2	AF176569|Mmel1|27390|membrane metallo-endopeptidase-like 1	NM_013783|Mmel1|27390|membrane metallo-endopeptidase-like 1	AF157105|Mmel1|27390|membrane metallo-endopeptidase-like 1
mm9_v1_chr17_+_32421400_32421423	0.00886332	BPTF.p2	
mm9_v1_chr12_+_89192945_89192962	0.00882161	BPTF.p2	AK145346|Oog1|193322|oogenesin 1	AK087852|Oog1|193322|oogenesin 1	AK135749|Oog1|193322|oogenesin 1	AK139641|Oog1|193322|oogenesin 1	AK143386|Oog1|193322|oogenesin 1	NM_178657|Oog1|193322|oogenesin 1	BC086484|Oog1|193322|oogenesin 1
mm9_v1_chrX_+_30598310_30598355	0.00880101	BPTF.p2	NM_001168334|Gm2799|100040482|predicted gene 2799	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr1_+_120285920_120286055	0.00868322	BPTF.p2	AK080782|Clasp1|76707|CLIP associating protein 1	BC157938|Clasp1|76707|CLIP associating protein 1	BC158064|Clasp1|76707|CLIP associating protein 1	AJ276962|Clasp1|76707|CLIP associating protein 1	AK031181|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr4_+_17780739_17780875	0.00859557	BPTF.p2	AK053598|Mmp16|17389|matrix metallopeptidase 16	AK048543|Mmp16|17389|matrix metallopeptidase 16	AK046170|Mmp16|17389|matrix metallopeptidase 16	AB021228|Mmp16|17389|matrix metallopeptidase 16	AF282844|Mmp16|17389|matrix metallopeptidase 16
mm9_v1_chr4_-_59973470_59973536	0.00853928	BPTF.p2	EU882229|Mup4|17843|major urinary protein 4	BC012227|Mup4|17843|major urinary protein 4	M16358|Mup4|17843|major urinary protein 4	NM_008648|Mup4|17843|major urinary protein 4
mm9_v1_chr9_-_20189550_20189620	0.00852874	BPTF.p2	AK006129|Zfp560|434377|zinc finger protein 560	AK012259|Zfp560|434377|zinc finger protein 560	AK009475|Zfp560|434377|zinc finger protein 560	AK009542|Zfp560|434377|zinc finger protein 560	AK010001|Zfp560|434377|zinc finger protein 560	BC141211|Zfp560|434377|zinc finger protein 560	AK141494|Zfp560|434377|zinc finger protein 560	NM_001004190|Zfp560|434377|zinc finger protein 560	AK012062|Zfp560|434377|zinc finger protein 560
mm9_v1_chr10_+_19928244_19928244	0.00846677	BPTF.p2	NM_001101561|Gm6251|621697|predicted gene 6251
mm9_v1_chr10_+_80532812_80532901	0.00846204	BPTF.p2	NM_022653|Thop1|50492|thimet oligopeptidase 1	BC031722|Thop1|50492|thimet oligopeptidase 1	BC003211|Thop1|50492|thimet oligopeptidase 1	AF314187|Thop1|50492|thimet oligopeptidase 1	AK028609|Thop1|50492|thimet oligopeptidase 1
mm9_v1_chr2_+_139319648_139319745	0.00798715	BPTF.p2	AK054240|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078686|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	NM_175467|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078679|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3
mm9_v1_chr7_+_30955159_30955213	0.00780466	BPTF.p2	AK142560|Gm5113|330503|predicted gene 5113
mm9_v1_chr14_+_62217061_62217076	0.00767082	BPTF.p2	AF220129|Trim13|66597|tripartite motif-containing 13	NM_001164220|Trim13|66597|tripartite motif-containing 13	AK162129|Trim13|66597|tripartite motif-containing 13
mm9_v1_chr12_-_113052051_113052070	0.00734587	BPTF.p2	AK014491|Xrcc3|74335|X-ray repair complementing defective repair in Chinese hamster cells 3	NM_028875|Xrcc3|74335|X-ray repair complementing defective repair in Chinese hamster cells 3
mm9_v1_chr5_+_130731488_130731494	0.00716542	BPTF.p2	AK045279|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	NM_178897|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm9_v1_chr17_+_47505827_47505888	0.00692335	BPTF.p2	NM_001146211|Mrps10|64657|mitochondrial ribosomal protein S10	NM_001146212|Mrps10|64657|mitochondrial ribosomal protein S10	AK142675|Mrps10|64657|mitochondrial ribosomal protein S10	AK004151|Mrps10|64657|mitochondrial ribosomal protein S10	BC038917|Mrps10|64657|mitochondrial ribosomal protein S10	BC096043|Mrps10|64657|mitochondrial ribosomal protein S10
mm9_v1_chr6_+_125081890_125081965	0.0066241	BPTF.p2	NM_138747|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK079914|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK154006|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK156568|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	BC007151|Nop2|110109|NOP2 nucleolar protein homolog (yeast)
mm9_v1_chr19_-_11893892_11893892	0.00656432	BPTF.p2	BC056949|Stx3|20908|syntaxin 3	NM_001025307|Stx3|20908|syntaxin 3	NM_152220|Stx3|20908|syntaxin 3
mm9_v1_chr12_+_88943636_88943653	0.00647675	BPTF.p2	AK145346|Oog1|193322|oogenesin 1	AK087852|Oog1|193322|oogenesin 1	AK135749|Oog1|193322|oogenesin 1	AK143386|Oog1|193322|oogenesin 1	NM_178657|Oog1|193322|oogenesin 1	BC086484|Oog1|193322|oogenesin 1
mm9_v1_chr3_-_143868114_143868170	0.00644859	BPTF.p2	AK033097|Lmo4|16911|LIM domain only 4	AK159590|Lmo4|16911|LIM domain only 4
mm9_v1_chr2_+_166888331_166888433	0.00643399	BPTF.p2	NM_001081005|1500012F01Rik|68949|RIKEN cDNA 1500012F01 gene
mm9_v1_chr1_+_130140700_130141098	0.00620851	BPTF.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr7_+_18398030_18398100	0.0059559	BPTF.p2	AK005390|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005482|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005509|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005533|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	NM_025957|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	BC099412|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14
mm9_v1_chr11_+_78059452_78059655	0.00570508	BPTF.p2	AK002496|Sdf2|20316|stromal cell derived factor 2	BC062881|Sdf2|20316|stromal cell derived factor 2	BC087871|Sdf2|20316|stromal cell derived factor 2	D50646|Sdf2|20316|stromal cell derived factor 2
mm9_v1_chr14_-_61877218_61877326	0.0054511	BPTF.p2	BC138960|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	BC138961|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AB024922|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AK132610|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AF282901|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	NM_011892|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)
mm9_v1_chr8_+_84239098_84239098	0.0052859	BPTF.p2	BC064813|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II	NM_001024617|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II
mm9_v1_chr3_+_154259975_154260228	0.00494408	BPTF.p2	NM_009968|Cryz|12972|crystallin, zeta	S70056|Cryz|12972|crystallin, zeta	BC003800|Cryz|12972|crystallin, zeta	AK098082|Cryz|12972|crystallin, zeta	AK134281|Cryz|12972|crystallin, zeta	BC043076|Cryz|12972|crystallin, zeta
mm9_v1_chr2_-_34678700_34678700	0.00485899	BPTF.p2	AF140683|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164768|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr2_+_90780626_90780644	0.00429957	BPTF.p2	AK014492|Celf1|13046|CUGBP, Elav-like family member 1	AK156725|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr8_+_42011568_42011702	0.00419254	BPTF.p2	AK081847|Pdgfrl|68797|platelet-derived growth factor receptor-like	AK132625|Pdgfrl|68797|platelet-derived growth factor receptor-like	NM_026840|Pdgfrl|68797|platelet-derived growth factor receptor-like	BC058275|Pdgfrl|68797|platelet-derived growth factor receptor-like	AK004179|Pdgfrl|68797|platelet-derived growth factor receptor-like
mm9_v1_chr11_-_120489993_120490076	0.00367293	BPTF.p2	AK038934|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	AK083165|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm9_v1_chr4_+_126354857_126354998	0.00330112	BPTF.p2	NM_011970|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK078487|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK164463|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	BC008265|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AF060090|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2
mm9_v1_chr5_-_17341713_17341713	0.00319906	BPTF.p2	NM_001159555|Cd36|12491|CD36 antigen	NM_007643|Cd36|12491|CD36 antigen
mm9_v1_chr7_-_123182257_123182257	0.00305841	BPTF.p2	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr7_-_147222126_147222249	0.00301063	BPTF.p2	BC025582|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK167924|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC025564|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC012519|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK153511|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC027034|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK146771|Tubgcp2|74237|tubulin, gamma complex associated protein 2	NM_133755|Tubgcp2|74237|tubulin, gamma complex associated protein 2
mm9_v1_chr2_+_127034130_127034141	0.00292032	BPTF.p2	AK039567|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	BC063261|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	NM_177214|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)
mm9_v1_chr15_+_73582208_73582380	0.00288457	BPTF.p2	BC027445|Ptp4a3|19245|protein tyrosine phosphatase 4a3	CT010215|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK003954|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr1_+_145586675_145586780	0.00280455	BPTF.p2	NM_001038592|Glrx2|69367|glutaredoxin 2 (thioltransferase)	NM_023505|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC065387|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF380337|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132031|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC132033|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145303|Glrx2|69367|glutaredoxin 2 (thioltransferase)	BC145304|Glrx2|69367|glutaredoxin 2 (thioltransferase)	AF276918|Glrx2|69367|glutaredoxin 2 (thioltransferase)
mm9_v1_chr4_+_115761660_115761879	0.0026116	BPTF.p2	BC007169|Lrrc41|230654|leucine rich repeat containing 41	AK181367|Lrrc41|230654|leucine rich repeat containing 41
mm9_v1_chr16_-_8637591_8637803	0.00250915	BPTF.p2	AK013147|Tmem186|66690|transmembrane protein 186	BC027261|Tmem186|66690|transmembrane protein 186	AK009236|Tmem186|66690|transmembrane protein 186	AK013277|Tmem186|66690|transmembrane protein 186	AK033686|Tmem186|66690|transmembrane protein 186	BC058268|Tmem186|66690|transmembrane protein 186	AK159727|Tmem186|66690|transmembrane protein 186	AK159782|Tmem186|66690|transmembrane protein 186	AK014478|Tmem186|66690|transmembrane protein 186	NM_025708|Tmem186|66690|transmembrane protein 186	AK088656|Tmem186|66690|transmembrane protein 186
mm9_v1_chr17_-_68353397_68353499	0.00237614	BPTF.p2	AK141901|Arhgap28|268970|Rho GTPase activating protein 28	BC066788|Arhgap28|268970|Rho GTPase activating protein 28	NM_172964|Arhgap28|268970|Rho GTPase activating protein 28	AK087523|Arhgap28|268970|Rho GTPase activating protein 28
mm9_v1_chr5_+_122804377_122804463	0.00232552	BPTF.p2	AK150330|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK008248|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK004103|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AF193794|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	NM_019780|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	BC005663|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK036426|Vps29|56433|vacuolar protein sorting 29 (S. pombe)
mm9_v1_chr6_-_124307086_124307103	0.00221105	BPTF.p2	BC120816|1700013D24Rik|76921|RIKEN cDNA 1700013D24 gene	BC120818|1700013D24Rik|76921|RIKEN cDNA 1700013D24 gene	NM_001177502|1700013D24Rik|76921|RIKEN cDNA 1700013D24 gene
mm9_v1_chr2_+_91050920_91051054	0.00191647	BPTF.p2	AK080581|Acp2|11432|acid phosphatase 2, lysosomal
mm9_v1_chr18_+_36894692_36894835	0.0018068	BPTF.p2	AK046207|Tmco6|71983|transmembrane and coiled-coil domains 6	BC005637|Tmco6|71983|transmembrane and coiled-coil domains 6	NM_028036|Tmco6|71983|transmembrane and coiled-coil domains 6	AK164554|Tmco6|71983|transmembrane and coiled-coil domains 6	AK010487|Tmco6|71983|transmembrane and coiled-coil domains 6
mm9_v1_chr11_-_77707282_77707373	0.00178216	BPTF.p2	U94700|Pipox|19193|pipecolic acid oxidase	BC013525|Pipox|19193|pipecolic acid oxidase	AK135009|Pipox|19193|pipecolic acid oxidase	AK149488|Pipox|19193|pipecolic acid oxidase	AK008555|Pipox|19193|pipecolic acid oxidase	NM_008952|Pipox|19193|pipecolic acid oxidase
mm9_v1_chr18_+_34569074_34569091	0.00170674	BPTF.p2	AF182033|Pkd2l2|53871|polycystic kidney disease 2-like 2	NM_001163004|Pkd2l2|53871|polycystic kidney disease 2-like 2	NM_016927|Pkd2l2|53871|polycystic kidney disease 2-like 2	AK133423|Pkd2l2|53871|polycystic kidney disease 2-like 2	AK142697|Pkd2l2|53871|polycystic kidney disease 2-like 2	BC138717|Pkd2l2|53871|polycystic kidney disease 2-like 2
mm9_v1_chr13_+_75977323_75977523	0.00163629	BPTF.p2	NM_053108|Glrx|93692|glutaredoxin	AK013722|Glrx|93692|glutaredoxin	AK153086|Glrx|93692|glutaredoxin	AF109314|Glrx|93692|glutaredoxin	AB013137|Glrx|93692|glutaredoxin	BC012642|Glrx|93692|glutaredoxin	BC054418|Glrx|93692|glutaredoxin	AF276917|Glrx|93692|glutaredoxin
mm9_v1_chr9_+_106105422_106105590	0.00160309	BPTF.p2	AK084026|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_011876|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK155204|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK166900|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC003338|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK170441|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK157886|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	Y17808|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AY267189|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)
mm9_v1_chr3_+_96531649_96531738	0.00149976	BPTF.p2	AK008329|Rnf115|67845|ring finger protein 115
mm9_v1_chr10_+_42221973_42222268	0.00149724	BPTF.p2	BC116885|Snx3|54198|sorting nexin 3	BC116889|Snx3|54198|sorting nexin 3	AK145350|Snx3|54198|sorting nexin 3	AK154728|Snx3|54198|sorting nexin 3	AF062482|Snx3|54198|sorting nexin 3	AK007798|Snx3|54198|sorting nexin 3	AK013261|Snx3|54198|sorting nexin 3	AK018790|Snx3|54198|sorting nexin 3	AK189751|Snx3|54198|sorting nexin 3
mm9_v1_chr11_-_29073541_29073557	0.00143828	BPTF.p2	AK042012|A630052C17Rik|320757|RIKEN cDNA A630052C17 gene
mm9_v1_chr11_-_106077657_106077682	0.00141166	BPTF.p2	AB040489|Ccdc47|67163|coiled-coil domain containing 47	AK078812|Ccdc47|67163|coiled-coil domain containing 47	NM_026009|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr17_-_32303796_32303836	0.000990974	BPTF.p2	NM_008716|Notch3|18131|Notch gene homolog 3 (Drosophila)	X74760|Notch3|18131|Notch gene homolog 3 (Drosophila)
mm9_v1_chrX_+_39421012_39421147	0.000947184	BPTF.p2	NM_009688|Xiap|11798|X-linked inhibitor of apoptosis
mm9_v1_chr4_-_58021900_58021995	0.00093551	BPTF.p2	AY495589|Txndc8|67402|thioredoxin domain containing 8	BC049564|Txndc8|67402|thioredoxin domain containing 8	AK006683|Txndc8|67402|thioredoxin domain containing 8	AK015240|Txndc8|67402|thioredoxin domain containing 8	BC116763|Txndc8|67402|thioredoxin domain containing 8	BC116765|Txndc8|67402|thioredoxin domain containing 8	BC144839|Txndc8|67402|thioredoxin domain containing 8	BC144840|Txndc8|67402|thioredoxin domain containing 8	NM_026132|Txndc8|67402|thioredoxin domain containing 8
mm9_v1_chr6_-_122692407_122692520	0.000821937	BPTF.p2	CT010354|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	M75135|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	X61093|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC050095|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK155997|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC034122|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC058811|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr14_+_9046655_9046821	0.000730002	BPTF.p2	AK082924|Kctd6|71393|potassium channel tetramerisation domain containing 6	AK017384|Kctd6|71393|potassium channel tetramerisation domain containing 6	NM_027782|Kctd6|71393|potassium channel tetramerisation domain containing 6	BC096370|Kctd6|71393|potassium channel tetramerisation domain containing 6
mm9_v1_chr11_+_74644479_74644499	0.000602604	BPTF.p2	Y07609|Mnt|17428|max binding protein	BC054534|Mnt|17428|max binding protein
mm9_v1_chr5_-_89104575_89104676	0.000599782	BPTF.p2	AK168385|Grsf1|231413|G-rich RNA sequence binding factor 1	AK168459|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_001098476|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr13_+_55206653_55206695	0.000592897	BPTF.p2	NM_012017|Zfp346|26919|zinc finger protein 346	AF083339|Zfp346|26919|zinc finger protein 346	BC055075|Zfp346|26919|zinc finger protein 346
mm9_v1_chrX_+_89735287_89735342	0.000568416	BPTF.p2	BC100438|Gm5941|546347|predicted gene 5941	NM_001034103|Gm5941|546347|predicted gene 5941	BC051629|Gm5941|546347|predicted gene 5941
mm9_v1_chr19_-_6118499_6118649	0.000543671	BPTF.p2	AK011298|Sac3d1|66406|SAC3 domain containing 1	AK014138|Sac3d1|66406|SAC3 domain containing 1	AK075930|Sac3d1|66406|SAC3 domain containing 1	AK139556|Sac3d1|66406|SAC3 domain containing 1	AJ131957|Sac3d1|66406|SAC3 domain containing 1	NM_133678|Sac3d1|66406|SAC3 domain containing 1	BC144812|Sac3d1|66406|SAC3 domain containing 1	BC145789|Sac3d1|66406|SAC3 domain containing 1
mm9_v1_chr4_+_73659506_73659598	0.000297667	BPTF.p2	AK079349|Frmd3|242506|FERM domain containing 3	NM_001163732|Frmd3|242506|FERM domain containing 3	NM_172869|Frmd3|242506|FERM domain containing 3	AK034956|Frmd3|242506|FERM domain containing 3	AK048561|Frmd3|242506|FERM domain containing 3	BC118964|Frmd3|242506|FERM domain containing 3	BC112419|Frmd3|242506|FERM domain containing 3	BC113795|Frmd3|242506|FERM domain containing 3
mm9_v1_chr3_+_19857053_19857266	8.40334e-05	BPTF.p2	BC062957|Cp|12870|ceruloplasmin	NM_001042611|Cp|12870|ceruloplasmin	NM_007752|Cp|12870|ceruloplasmin	DQ336396|Cp|12870|ceruloplasmin	AK014835|Cp|12870|ceruloplasmin	AK043248|Cp|12870|ceruloplasmin	U49430|Cp|12870|ceruloplasmin	AK149523|Cp|12870|ceruloplasmin
mm9_v1_chr7_-_25084567_25084655	5.54101e-05	BPTF.p2	NM_009561|Zfp61|22719|zinc finger protein 61	BC006618|Zfp61|22719|zinc finger protein 61
