mm9_v1_chr3_-_104855832_104856063	6.65234	CAGUGCA	BC003236|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK145085|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK051259|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK030438|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK129359|Cttnbp2nl|80281|CTTNBP2 N-terminal like	NM_001163332|Cttnbp2nl|80281|CTTNBP2 N-terminal like	NM_001163333|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK029901|Cttnbp2nl|80281|CTTNBP2 N-terminal like	NM_030249|Cttnbp2nl|80281|CTTNBP2 N-terminal like
mm9_v1_chr7_-_125273061_125273141	5.46869	CAGUGCA	BC046792|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF133669|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF223953|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	BC010196|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152885|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK090001|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150042|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151272|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK151507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK152565|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK163655|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167912|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168245|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK169191|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK150507|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154644|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167872|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK168172|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK154355|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AF172088|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK167888|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	NM_019419|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr3_-_36470904_36470919	5.2978	CAGUGCA	NM_009828|Ccna2|12428|cyclin A2	AK044924|Ccna2|12428|cyclin A2
mm9_v1_chr2_+_131012677_131012814	5.28943	CAGUGCA	BC048164|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	NM_001111075|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	NM_023117|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	AK153903|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	AK043730|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	AK004836|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	AK157397|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	BC057568|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)	S93521|Cdc25b|12531|cell division cycle 25 homolog B (S. pombe)
mm9_v1_chr6_+_97757012_97757093	5.274	CAGUGCA	AK154189|Mitf|17342|microphthalmia-associated transcription factor	AK155350|Mitf|17342|microphthalmia-associated transcription factor	AK160757|Mitf|17342|microphthalmia-associated transcription factor	NM_001113198|Mitf|17342|microphthalmia-associated transcription factor	AB009397|Mitf|17342|microphthalmia-associated transcription factor
mm9_v1_chr13_+_5860701_5860744	4.96937	CAGUGCA	NM_011803|Klf6|23849|Kruppel-like factor 6	AY027436|Klf6|23849|Kruppel-like factor 6
mm9_v1_chr15_-_86016336_86016570	4.92881	CAGUGCA	AK052269|Cerk|223753|ceramide kinase	BC094253|Cerk|223753|ceramide kinase	NM_145475|Cerk|223753|ceramide kinase
mm9_v1_chr6_+_97879810_97879849	4.91551	CAGUGCA	NM_001178049|Mitf|17342|microphthalmia-associated transcription factor	AK052895|Mitf|17342|microphthalmia-associated transcription factor	U19874|Mitf|17342|microphthalmia-associated transcription factor
mm9_v1_chr2_-_160192799_160192833	4.60787	CAGUGCA	AK132425|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	NM_010658|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	AK143209|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm9_v1_chr6_+_97941776_97941914	4.6023	CAGUGCA	NM_008601|Mitf|17342|microphthalmia-associated transcription factor	U19875|Mitf|17342|microphthalmia-associated transcription factor	Z23066|Mitf|17342|microphthalmia-associated transcription factor	BC108976|Mitf|17342|microphthalmia-associated transcription factor	BC108977|Mitf|17342|microphthalmia-associated transcription factor	AB221657|Mitf|17342|microphthalmia-associated transcription factor
mm9_v1_chr2_+_127951773_127951787	4.36593	CAGUGCA	AK031285|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK037885|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK150464|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK152472|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK153542|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK162975|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_009754|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207680|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207681|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK082613|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	BC019556|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK011490|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK050192|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr8_-_118230771_118230819	4.25658	CAGUGCA	AK132165|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	NM_001025577|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr5_-_68238654_68238670	4.12623	CAGUGCA	DQ503480|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK151709|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503479|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_001038999|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_009727|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503477|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr10_-_13194201_13194201	3.79074	CAGUGCA	BC012871|Phactr2|215789|phosphatase and actin regulator 2	NM_001195065|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr17_-_10512217_10512250	3.78419	CAGUGCA	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr16_+_32608981_32609106	3.72432	CAGUGCA	NM_011638|Tfrc|22042|transferrin receptor	AK048228|Tfrc|22042|transferrin receptor	AK088961|Tfrc|22042|transferrin receptor	BC054522|Tfrc|22042|transferrin receptor
mm9_v1_chr17_+_75404865_75404880	3.66282	CAGUGCA	NM_019919|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr5_-_137548123_137548145	3.65811	CAGUGCA	BC054091|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1	M33960|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1	AK040662|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1	NM_008871|Serpine1|18787|serine (or cysteine) peptidase inhibitor, clade E, member 1
mm9_v1_chr11_+_90110701_90110805	3.65751	CAGUGCA	AK033889|Mmd|67468|monocyte to macrophage differentiation-associated	AK007961|Mmd|67468|monocyte to macrophage differentiation-associated	BC021914|Mmd|67468|monocyte to macrophage differentiation-associated	NM_026178|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr10_-_13108775_13108775	3.5747	CAGUGCA	AK139466|Phactr2|215789|phosphatase and actin regulator 2	NM_001195066|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr6_-_13627853_13628000	3.54617	CAGUGCA	BC145708|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	BC145710|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK170526|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK046745|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	NM_175312|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene
mm9_v1_chr3_-_115417932_115417972	3.49205	CAGUGCA	AK004591|S1pr1|13609|sphingosine-1-phosphate receptor 1	NM_007901|S1pr1|13609|sphingosine-1-phosphate receptor 1
mm9_v1_chr8_+_130882920_130882997	3.48007	CAGUGCA	AK082992|Nrp1|18186|neuropilin 1	AK083052|Nrp1|18186|neuropilin 1	AK164378|Nrp1|18186|neuropilin 1	NM_008737|Nrp1|18186|neuropilin 1	BC026730|Nrp1|18186|neuropilin 1	BC032048|Nrp1|18186|neuropilin 1	AK148372|Nrp1|18186|neuropilin 1
mm9_v1_chr10_-_13043959_13044096	3.35014	CAGUGCA	BC130264|Phactr2|215789|phosphatase and actin regulator 2	AK142930|Phactr2|215789|phosphatase and actin regulator 2	NM_001033257|Phactr2|215789|phosphatase and actin regulator 2	NM_001195096|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr17_-_78817348_78817472	3.11157	CAGUGCA	BC064130|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK033547|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK165595|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC096619|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AY382580|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	NM_199448|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK159545|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK157221|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	AK150241|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)	BC052366|Fez2|225020|fasciculation and elongation protein zeta 2 (zygin II)
mm9_v1_chr6_-_39156706_39156787	3.07941	CAGUGCA	AK136238|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	AK042834|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	NM_001033430|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	AK042327|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr4_-_53172748_53172872	3.03741	CAGUGCA	AK051920|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1	NM_013454|Abca1|11303|ATP-binding cassette, sub-family A (ABC1), member 1
mm9_v1_chr2_+_138082301_138082378	3.00997	CAGUGCA	NM_001025431|Btbd3|228662|BTB (POZ) domain containing 3	AK052530|Btbd3|228662|BTB (POZ) domain containing 3	AK161924|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr1_+_12708582_12708625	3.00503	CAGUGCA	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr18_+_44540137_44540241	2.97677	CAGUGCA	AK153105|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_027490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK008609|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK017809|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK166560|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK010490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK152160|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153264|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153310|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)
mm9_v1_chr4_+_109015660_109015680	2.86687	CAGUGCA	NM_001159964|Eps15|13858|epidermal growth factor receptor pathway substrate 15	AK083176|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr15_-_103197178_103197295	2.86315	CAGUGCA	BC053431|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	NM_010577|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	BC050943|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)	BC059829|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)
mm9_v1_chr4_+_118781336_118781380	2.8501	CAGUGCA	NM_011400|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	M23384|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	BC055340|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1
mm9_v1_chr9_+_47338431_47338446	2.81952	CAGUGCA	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr10_+_110182506_110182701	2.81828	CAGUGCA	AK051521|E2f7|52679|E2F transcription factor 7	NM_178609|E2f7|52679|E2F transcription factor 7	AK031078|E2f7|52679|E2F transcription factor 7	AK041481|E2f7|52679|E2F transcription factor 7	AY463359|E2f7|52679|E2F transcription factor 7	AK143686|E2f7|52679|E2F transcription factor 7	BC145429|E2f7|52679|E2F transcription factor 7	BC150772|E2f7|52679|E2F transcription factor 7	AK045040|E2f7|52679|E2F transcription factor 7
mm9_v1_chr4_-_144836658_144836801	2.7459	CAGUGCA	X76401|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK170464|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	M60469|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	M59378|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	BC141405|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK155385|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK004752|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK004844|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK085490|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK140332|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK153301|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	NM_011610|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK156996|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b
mm9_v1_chr1_-_174136874_174136913	2.70594	CAGUGCA	NM_011063|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr11_+_78002249_78002305	2.68929	CAGUGCA	NM_033475|Rab34|19376|RAB34, member of RAS oncogene family	BC028481|Rab34|19376|RAB34, member of RAS oncogene family	AK160308|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chrX_+_156065141_156065596	2.68337	CAGUGCA	AK049182|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK172022|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK080930|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135727|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK038540|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK208632|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr17_+_75578120_75578285	2.6797	CAGUGCA	AK036047|Ltbp1|268977|latent transforming growth factor beta binding protein 1	NM_206958|Ltbp1|268977|latent transforming growth factor beta binding protein 1	AF280604|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr11_+_78001871_78001989	2.66133	CAGUGCA	NM_001159482|Rab34|19376|RAB34, member of RAS oncogene family	AF327929|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr3_+_27081918_27081998	2.64874	CAGUGCA	AK128968|Nceh1|320024|arylacetamide deacetylase-like 1	AK038691|Nceh1|320024|arylacetamide deacetylase-like 1	AK045363|Nceh1|320024|arylacetamide deacetylase-like 1	AK085767|Nceh1|320024|arylacetamide deacetylase-like 1	NM_178772|Nceh1|320024|arylacetamide deacetylase-like 1	AK135837|Nceh1|320024|arylacetamide deacetylase-like 1	BC082569|Nceh1|320024|arylacetamide deacetylase-like 1	AK173158|Nceh1|320024|arylacetamide deacetylase-like 1	AK034339|Nceh1|320024|arylacetamide deacetylase-like 1
mm9_v1_chr17_+_43526389_43526484	2.52677	CAGUGCA	NM_001081178|Gpr116|224792|G protein-coupled receptor 116
mm9_v1_chr6_-_92517359_92517359	2.52366	CAGUGCA	BC050793|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134461|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr1_-_132994093_132994119	2.48699	CAGUGCA	X76850|Mapkapk2|17164|MAP kinase-activated protein kinase 2	BC063064|Mapkapk2|17164|MAP kinase-activated protein kinase 2	NM_008551|Mapkapk2|17164|MAP kinase-activated protein kinase 2
mm9_v1_chr9_+_121275947_121276133	2.4814	CAGUGCA	NM_175114|Trak1|67095|trafficking protein, kinesin binding 1	BC046285|Trak1|67095|trafficking protein, kinesin binding 1	BC058971|Trak1|67095|trafficking protein, kinesin binding 1
mm9_v1_chr1_+_12682510_12682540	2.46994	CAGUGCA	NM_001198565|Sulf1|240725|sulfatase 1	NM_001198566|Sulf1|240725|sulfatase 1	AK078756|Sulf1|240725|sulfatase 1
mm9_v1_chr6_+_15670660_15670769	2.45182	CAGUGCA	AK165016|Mdfic|16543|MyoD family inhibitor domain containing	NM_175088|Mdfic|16543|MyoD family inhibitor domain containing	AK086117|Mdfic|16543|MyoD family inhibitor domain containing	AK172522|Mdfic|16543|MyoD family inhibitor domain containing	AK166462|Mdfic|16543|MyoD family inhibitor domain containing	AK080178|Mdfic|16543|MyoD family inhibitor domain containing	AK134050|Mdfic|16543|MyoD family inhibitor domain containing	AK048821|Mdfic|16543|MyoD family inhibitor domain containing
mm9_v1_chrX_+_156146532_156146595	2.40935	CAGUGCA	AK030839|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_021389|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK004636|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK020782|Sh3kbp1|58194|SH3-domain kinase binding protein 1	BC052863|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr6_-_92484838_92484854	2.38237	CAGUGCA	AK147576|Prickle2|243548|prickle homolog 2 (Drosophila)	AK147628|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134459|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr2_+_138104219_138104260	2.35746	CAGUGCA	AB093275|Btbd3|228662|BTB (POZ) domain containing 3	NM_145534|Btbd3|228662|BTB (POZ) domain containing 3	BC018174|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr6_-_92656148_92656177	2.32651	CAGUGCA	BC099897|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001081146|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr16_+_35983402_35983472	2.32104	CAGUGCA	AK169464|Kpna1|16646|karyopherin (importin) alpha 1	AK169311|Kpna1|16646|karyopherin (importin) alpha 1	AK169348|Kpna1|16646|karyopherin (importin) alpha 1	AK028307|Kpna1|16646|karyopherin (importin) alpha 1	AK154800|Kpna1|16646|karyopherin (importin) alpha 1	AK028259|Kpna1|16646|karyopherin (importin) alpha 1	NM_008465|Kpna1|16646|karyopherin (importin) alpha 1	U20619|Kpna1|16646|karyopherin (importin) alpha 1	BC006771|Kpna1|16646|karyopherin (importin) alpha 1
mm9_v1_chr6_-_92431385_92431385	2.30657	CAGUGCA	AK020123|Prickle2|243548|prickle homolog 2 (Drosophila)	AK032631|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134460|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr11_-_20731016_20731238	2.28993	CAGUGCA	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr16_+_30599808_30599823	2.2598	CAGUGCA	AK083036|Fam43a|224093|family with sequence similarity 43, member A	NM_177632|Fam43a|224093|family with sequence similarity 43, member A	AK137950|Fam43a|224093|family with sequence similarity 43, member A	BC099947|Fam43a|224093|family with sequence similarity 43, member A
mm9_v1_chr16_+_33185137_33185252	2.24995	CAGUGCA	BC035278|Osbpl11|106326|oxysterol binding protein-like 11	NM_176840|Osbpl11|106326|oxysterol binding protein-like 11	BC099400|Osbpl11|106326|oxysterol binding protein-like 11
mm9_v1_chr15_+_102820969_102821018	2.24319	CAGUGCA	NM_010466|Hoxc8|15426|homeobox C8	X07439|Hoxc8|15426|homeobox C8
mm9_v1_chr11_-_76660476_76660569	2.21965	CAGUGCA	AK142583|Cpd|12874|carboxypeptidase D	AK134907|Cpd|12874|carboxypeptidase D	AK137737|Cpd|12874|carboxypeptidase D	D85391|Cpd|12874|carboxypeptidase D	NM_007754|Cpd|12874|carboxypeptidase D
mm9_v1_chr17_-_67703726_67703889	2.2086	CAGUGCA	X58287|Ptprm|19274|protein tyrosine phosphatase, receptor type, M	BC058614|Ptprm|19274|protein tyrosine phosphatase, receptor type, M	NM_008984|Ptprm|19274|protein tyrosine phosphatase, receptor type, M
mm9_v1_chr13_+_44826121_44826271	2.20126	CAGUGCA	D31967|Jarid2|16468|jumonji, AT rich interactive domain 2	BC052444|Jarid2|16468|jumonji, AT rich interactive domain 2	BC060695|Jarid2|16468|jumonji, AT rich interactive domain 2	NM_021878|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr4_+_102791890_102792040	2.19099	CAGUGCA	AK143201|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AK138876|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	NM_001039081|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AK168693|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	BC108273|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AY769437|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis
mm9_v1_chr1_+_82836029_82836087	2.1847	CAGUGCA	AK048326|Agfg1|15463|ArfGAP with FG repeats 1	NM_010472|Agfg1|15463|ArfGAP with FG repeats 1	AK049400|Agfg1|15463|ArfGAP with FG repeats 1	BC031154|Agfg1|15463|ArfGAP with FG repeats 1
mm9_v1_chr5_+_144412109_144412109	2.15213	CAGUGCA	AK016645|Cyth3|19159|cytohesin 3	NM_001163548|Cyth3|19159|cytohesin 3
mm9_v1_chr5_-_37087204_37087208	2.11963	CAGUGCA	AK033480|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed	NM_001081232|D5Ertd579e|320661|DNA segment, Chr 5, ERATO Doi 579, expressed
mm9_v1_chr2_+_25036276_25036300	2.07835	CAGUGCA	AY046077|Nrarp|67122|Notch-regulated ankyrin repeat protein	NM_025980|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC020293|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC048088|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr7_-_4610551_4610664	2.058	CAGUGCA	BC053076|Ppp6r1|243819|protein phosphatase 6, regulatory subunit 1	NM_172894|Ppp6r1|243819|protein phosphatase 6, regulatory subunit 1	AK080891|Ppp6r1|243819|protein phosphatase 6, regulatory subunit 1
mm9_v1_chr6_-_97098845_97098885	2.04875	CAGUGCA	AK037507|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene	NM_175313|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene
mm9_v1_chr6_-_129422702_129422806	2.03107	CAGUGCA	AY534909|Clec7a|56644|C-type lectin domain family 7, member a	BC027742|Clec7a|56644|C-type lectin domain family 7, member a	AF262985|Clec7a|56644|C-type lectin domain family 7, member a	NM_020008|Clec7a|56644|C-type lectin domain family 7, member a
mm9_v1_chr3_+_102862151_102862295	2.02421	CAGUGCA	X13664|Nras|18176|neuroblastoma ras oncogene	NM_010937|Nras|18176|neuroblastoma ras oncogene	AK011704|Nras|18176|neuroblastoma ras oncogene	AK165960|Nras|18176|neuroblastoma ras oncogene	AK150357|Nras|18176|neuroblastoma ras oncogene	BC058755|Nras|18176|neuroblastoma ras oncogene	BC014704|Nras|18176|neuroblastoma ras oncogene	BC051443|Nras|18176|neuroblastoma ras oncogene
mm9_v1_chr9_+_70526702_70526924	1.99669	CAGUGCA	BC066207|Adam10|11487|a disintegrin and metallopeptidase domain 10	NM_007399|Adam10|11487|a disintegrin and metallopeptidase domain 10	BC057346|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr1_-_65003291_65003407	1.99099	CAGUGCA	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr9_-_20757236_20757422	1.9574	CAGUGCA	AK013247|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	BC053047|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	BC048148|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	AK143578|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	X14805|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	AK147143|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	NM_010066|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	AF162282|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1	U70051|Dnmt1|13433|DNA methyltransferase (cytosine-5) 1
mm9_v1_chr17_+_87153083_87153241	1.94086	CAGUGCA	AK136911|Epas1|13819|endothelial PAS domain protein 1	NM_010137|Epas1|13819|endothelial PAS domain protein 1	D89787|Epas1|13819|endothelial PAS domain protein 1
mm9_v1_chr17_-_48548973_48549148	1.93239	CAGUGCA	AK156487|Nfya|18044|nuclear transcription factor-Y alpha	BC029695|Nfya|18044|nuclear transcription factor-Y alpha	X55315|Nfya|18044|nuclear transcription factor-Y alpha	BC057099|Nfya|18044|nuclear transcription factor-Y alpha	AK137561|Nfya|18044|nuclear transcription factor-Y alpha	AK004729|Nfya|18044|nuclear transcription factor-Y alpha	AK143723|Nfya|18044|nuclear transcription factor-Y alpha	NM_001110832|Nfya|18044|nuclear transcription factor-Y alpha	NM_010913|Nfya|18044|nuclear transcription factor-Y alpha
mm9_v1_chr8_+_82163574_82163602	1.92023	CAGUGCA	NM_001081164|Otud4|73945|OTU domain containing 4	BC138373|Otud4|73945|OTU domain containing 4	BC145259|Otud4|73945|OTU domain containing 4
mm9_v1_chr10_+_59809598_59809683	1.90925	CAGUGCA	NM_001159572|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	NM_028732|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK079734|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK170059|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK032383|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK159086|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK159864|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK163118|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK170419|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK171045|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK033393|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK030479|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK014600|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK131118|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	BC003967|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene
mm9_v1_chr13_+_113254277_113254381	1.88605	CAGUGCA	NM_010560|Il6st|16195|interleukin 6 signal transducer	BC058679|Il6st|16195|interleukin 6 signal transducer	AK170020|Il6st|16195|interleukin 6 signal transducer	BC020454|Il6st|16195|interleukin 6 signal transducer
mm9_v1_chr18_+_69504145_69504185	1.88445	CAGUGCA	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr4_-_55545337_55545348	1.86786	CAGUGCA	U70662|Klf4|16600|Kruppel-like factor 4 (gut)	AK144942|Klf4|16600|Kruppel-like factor 4 (gut)	AK155343|Klf4|16600|Kruppel-like factor 4 (gut)	NM_010637|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr2_-_119980243_119980354	1.8216	CAGUGCA	BC012272|Ehd4|98878|EH-domain containing 4	AK149760|Ehd4|98878|EH-domain containing 4	AK163835|Ehd4|98878|EH-domain containing 4	AK147186|Ehd4|98878|EH-domain containing 4	AK159235|Ehd4|98878|EH-domain containing 4	AK159597|Ehd4|98878|EH-domain containing 4	NM_133838|Ehd4|98878|EH-domain containing 4	AK166101|Ehd4|98878|EH-domain containing 4	AK169343|Ehd4|98878|EH-domain containing 4
mm9_v1_chr5_+_144383313_144383461	1.81349	CAGUGCA	NM_011182|Cyth3|19159|cytohesin 3	AK142407|Cyth3|19159|cytohesin 3	AK220565|Cyth3|19159|cytohesin 3	AK159229|Cyth3|19159|cytohesin 3	BC035296|Cyth3|19159|cytohesin 3	AK036191|Cyth3|19159|cytohesin 3	AK168566|Cyth3|19159|cytohesin 3	AF084221|Cyth3|19159|cytohesin 3	AB013470|Cyth3|19159|cytohesin 3
mm9_v1_chr4_-_140695648_140695720	1.77022	CAGUGCA	BC066992|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171420|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK027934|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK145912|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171702|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_001025608|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_174996|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed
mm9_v1_chr17_-_26645403_26645422	1.74964	CAGUGCA	BC006967|Dusp1|19252|dual specificity phosphatase 1	X61940|Dusp1|19252|dual specificity phosphatase 1	AK159658|Dusp1|19252|dual specificity phosphatase 1	AK150433|Dusp1|19252|dual specificity phosphatase 1	AK152183|Dusp1|19252|dual specificity phosphatase 1	AK152905|Dusp1|19252|dual specificity phosphatase 1	AK159251|Dusp1|19252|dual specificity phosphatase 1	AK159363|Dusp1|19252|dual specificity phosphatase 1	AK159567|Dusp1|19252|dual specificity phosphatase 1	AK167602|Dusp1|19252|dual specificity phosphatase 1	AK168627|Dusp1|19252|dual specificity phosphatase 1	NM_013642|Dusp1|19252|dual specificity phosphatase 1	AK145903|Dusp1|19252|dual specificity phosphatase 1	AK152324|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr8_-_11312729_11312825	1.74401	CAGUGCA	J04694|Col4a1|12826|collagen, type IV, alpha 1	AK142097|Col4a1|12826|collagen, type IV, alpha 1	J03758|Col4a1|12826|collagen, type IV, alpha 1	AK147284|Col4a1|12826|collagen, type IV, alpha 1	AK147355|Col4a1|12826|collagen, type IV, alpha 1	X06777|Col4a1|12826|collagen, type IV, alpha 1	AK146487|Col4a1|12826|collagen, type IV, alpha 1	AK159130|Col4a1|12826|collagen, type IV, alpha 1	AK147661|Col4a1|12826|collagen, type IV, alpha 1	NM_009931|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr4_+_108952859_108952895	1.73382	CAGUGCA	NM_007943|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr1_-_121318824_121318824	1.67853	CAGUGCA	AK132352|Inhbb|16324|inhibin beta-B	NM_008381|Inhbb|16324|inhibin beta-B
mm9_v1_chr9_+_118620809_118620817	1.63621	CAGUGCA	NM_001113514|Itga9|104099|integrin alpha 9	AK139690|Itga9|104099|integrin alpha 9
mm9_v1_chr2_-_84265422_84265424	1.62962	CAGUGCA	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr1_+_6720087_6720131	1.62681	CAGUGCA	AB097467|St18|240690|suppression of tumorigenicity 18	AJ536155|St18|240690|suppression of tumorigenicity 18	AK032557|St18|240690|suppression of tumorigenicity 18	NM_173868|St18|240690|suppression of tumorigenicity 18
mm9_v1_chrX_-_153929935_153930011	1.61655	CAGUGCA	AK017775|Sms|20603|spermine synthase	Y09419|Sms|20603|spermine synthase	BC046623|Sms|20603|spermine synthase	AF031486|Sms|20603|spermine synthase	AK049787|Sms|20603|spermine synthase	AK160637|Sms|20603|spermine synthase	AK149929|Sms|20603|spermine synthase	AK002687|Sms|20603|spermine synthase	AK049780|Sms|20603|spermine synthase	AK136798|Sms|20603|spermine synthase	AK011542|Sms|20603|spermine synthase	AK160659|Sms|20603|spermine synthase	NM_009214|Sms|20603|spermine synthase	AK166665|Sms|20603|spermine synthase
mm9_v1_chr4_-_136454674_136454768	1.61337	CAGUGCA	X58861|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159343|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK002655|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK136737|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK150771|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159210|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	BC002086|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	NM_007572|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide
mm9_v1_chr17_-_31992708_31992780	1.60876	CAGUGCA	U11494|Sik1|17691|salt inducible kinase 1	AK141817|Sik1|17691|salt inducible kinase 1	NM_010831|Sik1|17691|salt inducible kinase 1	AK172427|Sik1|17691|salt inducible kinase 1
mm9_v1_chr16_+_52031661_52031695	1.59243	CAGUGCA	NM_001033238|Cblb|208650|Casitas B-lineage lymphoma b	AK147367|Cblb|208650|Casitas B-lineage lymphoma b
mm9_v1_chr9_+_118515769_118515921	1.56663	CAGUGCA	AJ344342|Itga9|104099|integrin alpha 9	NM_133721|Itga9|104099|integrin alpha 9	BC150824|Itga9|104099|integrin alpha 9
mm9_v1_chr11_-_109334465_109334613	1.56301	CAGUGCA	AK170472|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	BC017129|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	NM_134038|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chr6_+_113187821_113187914	1.56241	CAGUGCA	NM_026849|Mtmr14|97287|myotubularin related protein 14	AK161445|Mtmr14|97287|myotubularin related protein 14	BC018294|Mtmr14|97287|myotubularin related protein 14	AK034867|Mtmr14|97287|myotubularin related protein 14
mm9_v1_chr4_+_102787069_102787071	1.55477	CAGUGCA	BC043930|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	NM_027696|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AK129405|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis
mm9_v1_chr4_-_44180323_44180519	1.5544	CAGUGCA	BC062976|Rnf38|73469|ring finger protein 38	BC060730|Rnf38|73469|ring finger protein 38	NM_175201|Rnf38|73469|ring finger protein 38	AK006888|Rnf38|73469|ring finger protein 38
mm9_v1_chr2_-_129196855_129196879	1.54182	CAGUGCA	BC011437|Il1b|16176|interleukin 1 beta	NM_008361|Il1b|16176|interleukin 1 beta	M15131|Il1b|16176|interleukin 1 beta	AK168047|Il1b|16176|interleukin 1 beta	AK156396|Il1b|16176|interleukin 1 beta	AK157245|Il1b|16176|interleukin 1 beta	AK224980|Il1b|16176|interleukin 1 beta	AK225002|Il1b|16176|interleukin 1 beta
mm9_v1_chr3_-_108830522_108830608	1.52875	CAGUGCA	NM_001163567|Fam102b|329739|family with sequence similarity 102, member B
mm9_v1_chr2_+_131735663_131735721	1.51568	CAGUGCA	NM_011170|Prnp|19122|prion protein	AK148061|Prnp|19122|prion protein	AK158908|Prnp|19122|prion protein	AK159056|Prnp|19122|prion protein	AK162504|Prnp|19122|prion protein	AK148892|Prnp|19122|prion protein	AK157840|Prnp|19122|prion protein	AK150963|Prnp|19122|prion protein	AK159224|Prnp|19122|prion protein	AK160091|Prnp|19122|prion protein
mm9_v1_chr3_-_122322556_122322614	1.51015	CAGUGCA	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr3_+_51219882_51219968	1.50016	CAGUGCA	NM_053089|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr10_-_70747929_70748034	1.49398	CAGUGCA	AK144468|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	AK043167|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	BC019464|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	AK148364|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)	NM_145420|Ube2d1|216080|ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)
mm9_v1_chr16_-_18289209_18289363	1.48841	CAGUGCA	AK086233|Dgcr8|94223|DiGeorge syndrome critical region gene 8	AB086857|Dgcr8|94223|DiGeorge syndrome critical region gene 8	NM_033324|Dgcr8|94223|DiGeorge syndrome critical region gene 8	BC062919|Dgcr8|94223|DiGeorge syndrome critical region gene 8	BC066118|Dgcr8|94223|DiGeorge syndrome critical region gene 8
mm9_v1_chr2_-_101679136_101679136	1.47927	CAGUGCA	NM_001110849|Prr5l|72446|proline rich 5 like
mm9_v1_chr2_+_59450080_59450110	1.46967	CAGUGCA	NM_198294|Tanc1|66860|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm9_v1_chr12_-_21379292_21379460	1.46797	CAGUGCA	AJ007365|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC114999|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69613|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138416|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138420|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC145270|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC026052|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149288|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK139471|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC048792|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK137693|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK165739|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC094655|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK144161|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK142441|Adam17|11491|a disintegrin and metallopeptidase domain 17	NM_009615|Adam17|11491|a disintegrin and metallopeptidase domain 17	AB021709|Adam17|11491|a disintegrin and metallopeptidase domain 17
mm9_v1_chr6_+_7795223_7795332	1.45042	CAGUGCA	NM_052993|C1galt1|94192|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	AF157962|C1galt1|94192|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	BC064767|C1galt1|94192|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm9_v1_chr10_-_25018912_25018969	1.44405	CAGUGCA	BC099487|Akap7|432442|A kinase (PRKA) anchor protein 7	NM_018747|Akap7|432442|A kinase (PRKA) anchor protein 7	AY301068|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr6_-_72908352_72908476	1.43718	CAGUGCA	BC089326|Tmsb10|19240|thymosin, beta 10	BC145877|Tmsb10|19240|thymosin, beta 10	BC145879|Tmsb10|19240|thymosin, beta 10	BC094284|Tmsb10|19240|thymosin, beta 10	BC070416|Tmsb10|19240|thymosin, beta 10	BC048070|Tmsb10|19240|thymosin, beta 10	BC037153|Tmsb10|19240|thymosin, beta 10	BC080312|Tmsb10|19240|thymosin, beta 10	BC099374|Tmsb10|19240|thymosin, beta 10	BC093587|Tmsb10|19240|thymosin, beta 10	BC059777|Tmsb10|19240|thymosin, beta 10	BC092009|Tmsb10|19240|thymosin, beta 10	BC038926|Tmsb10|19240|thymosin, beta 10	AK019232|Tmsb10|19240|thymosin, beta 10	AK003178|Tmsb10|19240|thymosin, beta 10	AK005512|Tmsb10|19240|thymosin, beta 10	AK008557|Tmsb10|19240|thymosin, beta 10	AK012361|Tmsb10|19240|thymosin, beta 10	AK019212|Tmsb10|19240|thymosin, beta 10	AK131711|Tmsb10|19240|thymosin, beta 10	AK161987|Tmsb10|19240|thymosin, beta 10	NM_025284|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr9_-_99336923_99337150	1.4336	CAGUGCA	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr9_+_58430031_58430196	1.41265	CAGUGCA	NM_009145|Nptn|20320|neuroplastin	BC039191|Nptn|20320|neuroplastin
mm9_v1_chr18_+_69505374_69505487	1.39066	CAGUGCA	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr6_-_72908741_72908741	1.38785	CAGUGCA	NM_001190327|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr9_-_108962219_108962241	1.38373	CAGUGCA	AF319574|Trex1|22040|three prime repair exonuclease 1	AF151106|Trex1|22040|three prime repair exonuclease 1	NM_011637|Trex1|22040|three prime repair exonuclease 1	BC011133|Trex1|22040|three prime repair exonuclease 1
mm9_v1_chr9_-_49607164_49607185	1.35849	CAGUGCA	NM_001081445|Ncam1|17967|neural cell adhesion molecule 1	NM_001113204|Ncam1|17967|neural cell adhesion molecule 1	NM_010875|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr15_+_76181718_76181819	1.34924	CAGUGCA	NM_001164607|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_001164608|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_026859|Maf1|68877|MAF1 homolog (S. cerevisiae)	BC016260|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK154047|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK042913|Maf1|68877|MAF1 homolog (S. cerevisiae)
mm9_v1_chr4_-_44181148_44181210	1.349	CAGUGCA	AK044324|Rnf38|73469|ring finger protein 38	NM_001038993|Rnf38|73469|ring finger protein 38	AK147608|Rnf38|73469|ring finger protein 38
mm9_v1_chr9_-_108961721_108961772	1.33483	CAGUGCA	AK171916|Trex1|22040|three prime repair exonuclease 1	AK009899|Trex1|22040|three prime repair exonuclease 1	AK087832|Trex1|22040|three prime repair exonuclease 1	NM_001012236|Trex1|22040|three prime repair exonuclease 1
mm9_v1_chrX_+_156278399_156278494	1.32362	CAGUGCA	AK028299|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135728|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr11_+_82765567_82765652	1.29683	CAGUGCA	AK171886|Slfn5|327978|schlafen 5	AK036486|Slfn5|327978|schlafen 5	NM_183201|Slfn5|327978|schlafen 5	AK039815|Slfn5|327978|schlafen 5	AK040359|Slfn5|327978|schlafen 5
mm9_v1_chr8_-_26212242_26212282	1.29648	CAGUGCA	AK042324|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2	AK078212|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2	NM_031257|Plekha2|83436|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
mm9_v1_chrX_+_103222548_103222685	1.29242	CAGUGCA	AK017506|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK033254|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_001109757|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_009726|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK155643|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK171563|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK172209|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U03434|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U71091|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	BC141395|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr19_+_42164922_42164992	1.28676	CAGUGCA	NM_145501|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	AK030725|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC110363|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC089309|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha
mm9_v1_chr6_-_66987377_66987402	1.28543	CAGUGCA	BC011141|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	AK144900|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	L28177|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha	NM_007836|Gadd45a|13197|growth arrest and DNA-damage-inducible 45 alpha
mm9_v1_chr10_+_87321789_87322010	1.27368	CAGUGCA	NM_001111275|Igf1|16000|insulin-like growth factor 1	NM_010512|Igf1|16000|insulin-like growth factor 1	AK050118|Igf1|16000|insulin-like growth factor 1	AK081019|Igf1|16000|insulin-like growth factor 1	AK165471|Igf1|16000|insulin-like growth factor 1	AY878192|Igf1|16000|insulin-like growth factor 1	AY878193|Igf1|16000|insulin-like growth factor 1	AK052033|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr16_-_91011339_91011552	1.26743	CAGUGCA	NM_001045515|Synj1|104015|synaptojanin 1	NM_001164483|Synj1|104015|synaptojanin 1
mm9_v1_chr1_-_183772442_183772553	1.25906	CAGUGCA	BC021516|Lbr|98386|lamin B receptor	AK166850|Lbr|98386|lamin B receptor	AK167157|Lbr|98386|lamin B receptor	AK033459|Lbr|98386|lamin B receptor	AK088179|Lbr|98386|lamin B receptor	AK030606|Lbr|98386|lamin B receptor	BC042522|Lbr|98386|lamin B receptor	AK151798|Lbr|98386|lamin B receptor	AK161762|Lbr|98386|lamin B receptor	AK028426|Lbr|98386|lamin B receptor	NM_133815|Lbr|98386|lamin B receptor
mm9_v1_chr1_+_183081058_183081062	1.24803	CAGUGCA	NM_030131|Cnih4|98417|cornichon homolog 4 (Drosophila)
mm9_v1_chrX_-_101609169_101609195	1.23835	CAGUGCA	AK151967|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK152535|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK152816|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK152946|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK084853|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	AK040069|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BC151037|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	NM_009592|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7	BC080769|Abcb7|11306|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm9_v1_chr2_-_69424085_69424123	1.22456	CAGUGCA	AK049346|Lrp2|14725|low density lipoprotein receptor-related protein 2	AK084165|Lrp2|14725|low density lipoprotein receptor-related protein 2	AK165434|Lrp2|14725|low density lipoprotein receptor-related protein 2	NM_001081088|Lrp2|14725|low density lipoprotein receptor-related protein 2
mm9_v1_chr5_+_135644171_135644241	1.22345	CAGUGCA	NM_009745|Bcl7b|12054|B-cell CLL/lymphoma 7B
mm9_v1_chr8_+_112302530_112302620	1.21085	CAGUGCA	AK036387|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	NM_009677|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	X54424|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	AK145821|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC052703|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC054535|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit
mm9_v1_chr1_+_75378688_75378710	1.19532	CAGUGCA	NM_001085371|Speg|11790|SPEG complex locus	AK164360|Speg|11790|SPEG complex locus
mm9_v1_chr13_+_46513668_46513668	1.19142	CAGUGCA	NM_001081425|Rbm24|666794|RNA binding motif protein 24
mm9_v1_chr6_-_91423388_91423454	1.18595	CAGUGCA	AK010479|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	BC019405|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	NM_133928|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4
mm9_v1_chr6_-_72908018_72908225	1.17742	CAGUGCA	BC089327|Tmsb10|19240|thymosin, beta 10	Z48496|Tmsb10|19240|thymosin, beta 10	NM_001039392|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr5_+_116081897_116082155	1.17581	CAGUGCA	BC056466|Rab35|77407|RAB35, member RAS oncogene family	NM_198163|Rab35|77407|RAB35, member RAS oncogene family	AK156576|Rab35|77407|RAB35, member RAS oncogene family	AB232631|Rab35|77407|RAB35, member RAS oncogene family
mm9_v1_chr19_-_5726221_5726316	1.14655	CAGUGCA	BC004660|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305087|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305088|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305089|Ehbp1l1|114601|EH domain binding protein 1-like 1	AF305090|Ehbp1l1|114601|EH domain binding protein 1-like 1	AK089917|Ehbp1l1|114601|EH domain binding protein 1-like 1	AK169974|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114595|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114596|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_001114597|Ehbp1l1|114601|EH domain binding protein 1-like 1	NM_053252|Ehbp1l1|114601|EH domain binding protein 1-like 1
mm9_v1_chr12_+_4599810_4599868	1.14145	CAGUGCA	AK034367|Itsn2|20403|intersectin 2	NM_001198968|Itsn2|20403|intersectin 2	NM_001198969|Itsn2|20403|intersectin 2	NM_011365|Itsn2|20403|intersectin 2	BC138262|Itsn2|20403|intersectin 2	BC171950|Itsn2|20403|intersectin 2	AK163807|Itsn2|20403|intersectin 2	AK042449|Itsn2|20403|intersectin 2	AK029325|Itsn2|20403|intersectin 2
mm9_v1_chr8_+_114062242_114062242	1.14084	CAGUGCA	NM_001168623|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr9_+_108362848_108362907	1.13811	CAGUGCA	NM_133744|Ccdc71|72454|coiled-coil domain containing 71	AK085544|Ccdc71|72454|coiled-coil domain containing 71	AK079333|Ccdc71|72454|coiled-coil domain containing 71	AK011229|Ccdc71|72454|coiled-coil domain containing 71	AK044601|Ccdc71|72454|coiled-coil domain containing 71	AK086560|Ccdc71|72454|coiled-coil domain containing 71	AK149878|Ccdc71|72454|coiled-coil domain containing 71	AK136982|Ccdc71|72454|coiled-coil domain containing 71	BC018518|Ccdc71|72454|coiled-coil domain containing 71
mm9_v1_chr6_-_5446277_5446311	1.12618	CAGUGCA	AJ001418|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	NM_013743|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	BC026134|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK004543|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK036818|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4
mm9_v1_chr17_-_71660199_71660362	1.12008	CAGUGCA	GQ872457|Emilin2|246707|elastin microfibril interfacer 2	GQ872460|Emilin2|246707|elastin microfibril interfacer 2	AF468645|Emilin2|246707|elastin microfibril interfacer 2	AK171616|Emilin2|246707|elastin microfibril interfacer 2	AK155913|Emilin2|246707|elastin microfibril interfacer 2	AK170391|Emilin2|246707|elastin microfibril interfacer 2	AK154230|Emilin2|246707|elastin microfibril interfacer 2	AK170288|Emilin2|246707|elastin microfibril interfacer 2	AK171579|Emilin2|246707|elastin microfibril interfacer 2	AK171592|Emilin2|246707|elastin microfibril interfacer 2	AK155037|Emilin2|246707|elastin microfibril interfacer 2	AK155366|Emilin2|246707|elastin microfibril interfacer 2	AK171020|Emilin2|246707|elastin microfibril interfacer 2	AK155879|Emilin2|246707|elastin microfibril interfacer 2	AK155306|Emilin2|246707|elastin microfibril interfacer 2	AK155797|Emilin2|246707|elastin microfibril interfacer 2	AK155554|Emilin2|246707|elastin microfibril interfacer 2	AK155878|Emilin2|246707|elastin microfibril interfacer 2	AK170081|Emilin2|246707|elastin microfibril interfacer 2	AK171309|Emilin2|246707|elastin microfibril interfacer 2	AK155909|Emilin2|246707|elastin microfibril interfacer 2	AK170801|Emilin2|246707|elastin microfibril interfacer 2	NM_145158|Emilin2|246707|elastin microfibril interfacer 2	AK170953|Emilin2|246707|elastin microfibril interfacer 2	AK170822|Emilin2|246707|elastin microfibril interfacer 2	AK171015|Emilin2|246707|elastin microfibril interfacer 2	AK155918|Emilin2|246707|elastin microfibril interfacer 2
mm9_v1_chr1_+_75396650_75396733	1.11621	CAGUGCA	NM_001173477|Speg|11790|SPEG complex locus
mm9_v1_chr4_-_133574655_133574730	1.10442	CAGUGCA	AB221669|Lin28a|83557|lin-28 homolog A (C. elegans)	BC068304|Lin28a|83557|lin-28 homolog A (C. elegans)	AF521097|Lin28a|83557|lin-28 homolog A (C. elegans)	NM_145833|Lin28a|83557|lin-28 homolog A (C. elegans)
mm9_v1_chr9_+_59598963_59599005	1.0974	CAGUGCA	NM_173018|Myo9a|270163|myosin IXa	AK048681|Myo9a|270163|myosin IXa
mm9_v1_chr13_+_20277293_20277293	1.09178	CAGUGCA	AF398883|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	NM_080288|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)
mm9_v1_chr4_-_63681749_63681759	1.08907	CAGUGCA	BC117979|Tnc|21923|tenascin C	BC117980|Tnc|21923|tenascin C	NM_011607|Tnc|21923|tenascin C	X56304|Tnc|21923|tenascin C
mm9_v1_chr7_+_104991443_104991474	1.08725	CAGUGCA	BC055740|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC060157|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	NM_011035|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC079838|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr2_-_167174531_167174736	1.0741	CAGUGCA	AF142673|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5	NM_019835|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5	AB004786|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm9_v1_chr11_-_109334909_109334911	1.073	CAGUGCA	NM_001029842|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	AK032026|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chr4_+_11118500_11118500	1.07219	CAGUGCA	NM_001037134|Ccne2|12448|cyclin E2
mm9_v1_chr13_+_55794441_55794492	1.06567	CAGUGCA	AK088693|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	BC051430|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	NM_181278|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr19_+_11986887_11986895	1.06375	CAGUGCA	AK150301|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK170918|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	NM_172635|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK154102|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)
mm9_v1_chr3_+_40549475_40549540	1.06247	CAGUGCA	BC012712|Hspa4l|18415|heat shock protein 4 like	AK144225|Hspa4l|18415|heat shock protein 4 like	AK032066|Hspa4l|18415|heat shock protein 4 like	BC110662|Hspa4l|18415|heat shock protein 4 like	BC057002|Hspa4l|18415|heat shock protein 4 like	NM_011020|Hspa4l|18415|heat shock protein 4 like	D49482|Hspa4l|18415|heat shock protein 4 like
mm9_v1_chr19_-_32423805_32423805	1.06133	CAGUGCA	BC076618|Sgms1|208449|sphingomyelin synthase 1	NM_001168525|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr2_-_101637773_101637865	1.05934	CAGUGCA	BC048394|Prr5l|72446|proline rich 5 like	AK030499|Prr5l|72446|proline rich 5 like	NM_001083810|Prr5l|72446|proline rich 5 like	NM_175181|Prr5l|72446|proline rich 5 like	AK145981|Prr5l|72446|proline rich 5 like
mm9_v1_chr1_-_130256055_130256293	1.0468	CAGUGCA	AK188642|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK177954|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK180079|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK183692|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK194535|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK210474|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK211618|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK150726|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146896|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC051658|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC057584|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK145520|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146770|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK146272|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	AK088493|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	D86726|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	NM_008567|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)	BC050886|Mcm6|17219|minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)
mm9_v1_chr19_-_32462926_32462979	1.03891	CAGUGCA	AK151170|Sgms1|208449|sphingomyelin synthase 1	AK153406|Sgms1|208449|sphingomyelin synthase 1	AK146782|Sgms1|208449|sphingomyelin synthase 1	AY509044|Sgms1|208449|sphingomyelin synthase 1	NM_144792|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr2_+_130275977_130276080	1.03306	CAGUGCA	AK010458|Ptpra|19262|protein tyrosine phosphatase, receptor type, A	NM_001163688|Ptpra|19262|protein tyrosine phosphatase, receptor type, A	NM_008980|Ptpra|19262|protein tyrosine phosphatase, receptor type, A	AK031690|Ptpra|19262|protein tyrosine phosphatase, receptor type, A	AK165673|Ptpra|19262|protein tyrosine phosphatase, receptor type, A	BC050930|Ptpra|19262|protein tyrosine phosphatase, receptor type, A	BC110683|Ptpra|19262|protein tyrosine phosphatase, receptor type, A
mm9_v1_chr17_-_66868909_66869045	1.02743	CAGUGCA	AB232607|Rab12|19328|RAB12, member RAS oncogene family	NM_024448|Rab12|19328|RAB12, member RAS oncogene family
mm9_v1_chr17_+_44325518_44325614	1.02743	CAGUGCA	NM_172621|Clic5|224796|chloride intracellular channel 5	AK046522|Clic5|224796|chloride intracellular channel 5	BC064037|Clic5|224796|chloride intracellular channel 5	AK017800|Clic5|224796|chloride intracellular channel 5
mm9_v1_chr16_+_11066390_11066492	1.01277	CAGUGCA	NM_009223|Snn|20621|stannin	BC006961|Snn|20621|stannin	AK149685|Snn|20621|stannin	BC063027|Snn|20621|stannin	BC017685|Snn|20621|stannin
mm9_v1_chr7_+_19766490_19766570	0.995041	CAGUGCA	NM_001162996|Eml2|72205|echinoderm microtubule associated protein like 2	NM_028153|Eml2|72205|echinoderm microtubule associated protein like 2	BC055476|Eml2|72205|echinoderm microtubule associated protein like 2	AK005562|Eml2|72205|echinoderm microtubule associated protein like 2
mm9_v1_chr15_+_5093855_5093914	0.98254	CAGUGCA	NM_001013367|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK160612|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AK147811|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	BC086695|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit	AY885266|Prkaa1|105787|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm9_v1_chr19_-_9973901_9974022	0.977742	CAGUGCA	BC021761|Incenp|16319|inner centromere protein	AK034764|Incenp|16319|inner centromere protein	AK081841|Incenp|16319|inner centromere protein	BC052414|Incenp|16319|inner centromere protein	AF117610|Incenp|16319|inner centromere protein	BC037011|Incenp|16319|inner centromere protein	AK088627|Incenp|16319|inner centromere protein	NM_016692|Incenp|16319|inner centromere protein
mm9_v1_chr4_+_11118855_11118930	0.973351	CAGUGCA	NM_009830|Ccne2|12448|cyclin E2	AK010929|Ccne2|12448|cyclin E2	AK031116|Ccne2|12448|cyclin E2	AK037791|Ccne2|12448|cyclin E2	AK167428|Ccne2|12448|cyclin E2
mm9_v1_chr3_+_126299858_126299959	0.965208	CAGUGCA	AK220516|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	NM_001025438|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	NM_001025439|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	NM_023813|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK032524|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK042722|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK044872|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK142435|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK157736|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	AK145106|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta	BC057103|Camk2d|108058|calcium/calmodulin-dependent protein kinase II, delta
mm9_v1_chr6_-_92133945_92134035	0.962305	CAGUGCA	AK131114|Mrps25|64658|mitochondrial ribosomal protein S25	AK013196|Mrps25|64658|mitochondrial ribosomal protein S25	AK004037|Mrps25|64658|mitochondrial ribosomal protein S25	BC022953|Mrps25|64658|mitochondrial ribosomal protein S25	NM_025578|Mrps25|64658|mitochondrial ribosomal protein S25
mm9_v1_chr9_+_86916846_86916935	0.959763	CAGUGCA	AK090159|Cyb5r4|266690|cytochrome b5 reductase 4	NM_024195|Cyb5r4|266690|cytochrome b5 reductase 4	AK157312|Cyb5r4|266690|cytochrome b5 reductase 4	AK169937|Cyb5r4|266690|cytochrome b5 reductase 4	AK169995|Cyb5r4|266690|cytochrome b5 reductase 4	BC025438|Cyb5r4|266690|cytochrome b5 reductase 4	AK034878|Cyb5r4|266690|cytochrome b5 reductase 4	AK172252|Cyb5r4|266690|cytochrome b5 reductase 4
mm9_v1_chr11_+_5688463_5688609	0.956235	CAGUGCA	NM_001146308|Dbnl|13169|drebrin-like	NM_001146309|Dbnl|13169|drebrin-like	NM_013810|Dbnl|13169|drebrin-like	AK053796|Dbnl|13169|drebrin-like	AK046073|Dbnl|13169|drebrin-like	AK151096|Dbnl|13169|drebrin-like	AK152204|Dbnl|13169|drebrin-like	AK153072|Dbnl|13169|drebrin-like	AK161973|Dbnl|13169|drebrin-like	AK159984|Dbnl|13169|drebrin-like	AK168898|Dbnl|13169|drebrin-like	AK134136|Dbnl|13169|drebrin-like	AK134487|Dbnl|13169|drebrin-like	AK140752|Dbnl|13169|drebrin-like	AK146920|Dbnl|13169|drebrin-like	AK152110|Dbnl|13169|drebrin-like	BC046430|Dbnl|13169|drebrin-like	AK078082|Dbnl|13169|drebrin-like	AK172471|Dbnl|13169|drebrin-like	U58884|Dbnl|13169|drebrin-like	AK153389|Dbnl|13169|drebrin-like	AK142818|Dbnl|13169|drebrin-like	AK167956|Dbnl|13169|drebrin-like	AY098595|Dbnl|13169|drebrin-like	AK199448|Dbnl|13169|drebrin-like	AK203166|Dbnl|13169|drebrin-like
mm9_v1_chrX_-_138825032_138825081	0.952925	CAGUGCA	AK054387|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_001033600|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_019477|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_207625|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr2_-_77118632_77118710	0.951577	CAGUGCA	BC013245|Sestd1|228071|SEC14 and spectrin domains 1	AK047939|Sestd1|228071|SEC14 and spectrin domains 1	BC044853|Sestd1|228071|SEC14 and spectrin domains 1	NM_175465|Sestd1|228071|SEC14 and spectrin domains 1
mm9_v1_chr16_+_23224804_23224864	0.94908	CAGUGCA	BC092222|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	NM_145933|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr6_-_87285690_87285768	0.946763	CAGUGCA	AF378762|Antxr1|69538|anthrax toxin receptor 1	BC094544|Antxr1|69538|anthrax toxin receptor 1	AK031465|Antxr1|69538|anthrax toxin receptor 1	NM_054041|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chr6_-_82983358_82983472	0.931575	CAGUGCA	U78818|Dok1|13448|docking protein 1	BC013066|Dok1|13448|docking protein 1	AK169871|Dok1|13448|docking protein 1	AK136382|Dok1|13448|docking protein 1	NM_010070|Dok1|13448|docking protein 1
mm9_v1_chr16_-_36666078_36666195	0.930732	CAGUGCA	AF065897|Cd86|12524|CD86 antigen	AF065898|Cd86|12524|CD86 antigen	AF065899|Cd86|12524|CD86 antigen	AF065900|Cd86|12524|CD86 antigen	S70108|Cd86|12524|CD86 antigen	BC013807|Cd86|12524|CD86 antigen	L25606|Cd86|12524|CD86 antigen	AK079513|Cd86|12524|CD86 antigen	AK155710|Cd86|12524|CD86 antigen	AK170054|Cd86|12524|CD86 antigen	NM_019388|Cd86|12524|CD86 antigen	AK172548|Cd86|12524|CD86 antigen	AK172686|Cd86|12524|CD86 antigen
mm9_v1_chrX_-_163647088_163647149	0.925414	CAGUGCA	AK010659|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK088783|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK162286|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169718|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169108|Tmsb4x|19241|thymosin, beta 4, X chromosome	NM_021278|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr7_-_112900699_112900744	0.922271	CAGUGCA	AJ011912|Tpp1|12751|tripeptidyl peptidase I	BC024820|Tpp1|12751|tripeptidyl peptidase I	AK170781|Tpp1|12751|tripeptidyl peptidase I	AK146759|Tpp1|12751|tripeptidyl peptidase I	AK048279|Tpp1|12751|tripeptidyl peptidase I	NM_009906|Tpp1|12751|tripeptidyl peptidase I	AK083832|Tpp1|12751|tripeptidyl peptidase I	AK169924|Tpp1|12751|tripeptidyl peptidase I	AF111172|Tpp1|12751|tripeptidyl peptidase I	AK155021|Tpp1|12751|tripeptidyl peptidase I	AK002418|Tpp1|12751|tripeptidyl peptidase I	AK165669|Tpp1|12751|tripeptidyl peptidase I
mm9_v1_chr9_-_51976215_51976215	0.916703	CAGUGCA	NM_001162921|Zc3h12c|244871|zinc finger CCCH type containing 12C
mm9_v1_chr18_+_73732352_73732560	0.901535	CAGUGCA	NM_001039214|Mex3c|240396|mex3 homolog C (C. elegans)	AK133686|Mex3c|240396|mex3 homolog C (C. elegans)
mm9_v1_chr3_-_95085997_95085997	0.900589	CAGUGCA	BC057546|Prune|229589|prune homolog (Drosophila)	NM_173347|Prune|229589|prune homolog (Drosophila)
mm9_v1_chr2_-_125332107_125332185	0.898579	CAGUGCA	U22493|Fbn1|14118|fibrillin 1	AK080935|Fbn1|14118|fibrillin 1	NM_007993|Fbn1|14118|fibrillin 1
mm9_v1_chr19_-_32285445_32285502	0.898032	CAGUGCA	AK079254|Sgms1|208449|sphingomyelin synthase 1	AK133967|Sgms1|208449|sphingomyelin synthase 1	BC019443|Sgms1|208449|sphingomyelin synthase 1	AK150272|Sgms1|208449|sphingomyelin synthase 1	AK152312|Sgms1|208449|sphingomyelin synthase 1	AK160539|Sgms1|208449|sphingomyelin synthase 1	NM_001168526|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr15_+_12134833_12134872	0.893076	CAGUGCA	AK076161|Mtmr12|268783|myotubularin related protein 12	BC054352|Mtmr12|268783|myotubularin related protein 12	NM_172958|Mtmr12|268783|myotubularin related protein 12	AK050099|Mtmr12|268783|myotubularin related protein 12	AK050236|Mtmr12|268783|myotubularin related protein 12	BC042573|Mtmr12|268783|myotubularin related protein 12
mm9_v1_chr7_+_73254341_73254400	0.879611	CAGUGCA	AK129255|Chsy1|269941|chondroitin sulfate synthase 1	BC128567|Chsy1|269941|chondroitin sulfate synthase 1	BC153826|Chsy1|269941|chondroitin sulfate synthase 1	BC153827|Chsy1|269941|chondroitin sulfate synthase 1	NM_001081163|Chsy1|269941|chondroitin sulfate synthase 1
mm9_v1_chr9_+_40493989_40494055	0.874198	CAGUGCA	AK033723|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene	NM_133733|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr7_-_35015309_35015367	0.873288	CAGUGCA	AK147124|Gpi1|14751|glucose phosphate isomerase 1	NM_008155|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr13_-_99696254_99696340	0.871643	CAGUGCA	AK030580|Tnpo1|238799|transportin 1	AK087194|Tnpo1|238799|transportin 1	AK037001|Tnpo1|238799|transportin 1	AK029953|Tnpo1|238799|transportin 1	NM_178716|Tnpo1|238799|transportin 1
mm9_v1_chr15_-_79272478_79272599	0.867183	CAGUGCA	NM_013767|Csnk1e|27373|casein kinase 1, epsilon
mm9_v1_chr17_-_24388262_24388385	0.860152	CAGUGCA	BC021658|Ccnf|12449|cyclin F	Z47766|Ccnf|12449|cyclin F	U20612|Ccnf|12449|cyclin F	U20636|Ccnf|12449|cyclin F	AK085183|Ccnf|12449|cyclin F	AK030298|Ccnf|12449|cyclin F	AK031613|Ccnf|12449|cyclin F	AK032961|Ccnf|12449|cyclin F	AK162447|Ccnf|12449|cyclin F	AK169263|Ccnf|12449|cyclin F	AK082485|Ccnf|12449|cyclin F	AK159594|Ccnf|12449|cyclin F	NM_007634|Ccnf|12449|cyclin F
mm9_v1_chr11_-_54601163_54601250	0.85515	CAGUGCA	AK145931|Cdc42se2|72729|CDC42 small effector 2	AK160934|Cdc42se2|72729|CDC42 small effector 2	NM_178626|Cdc42se2|72729|CDC42 small effector 2
mm9_v1_chr5_+_102194126_102194174	0.843804	CAGUGCA	BC055292|Cds1|74596|CDP-diacylglycerol synthase 1	NM_173370|Cds1|74596|CDP-diacylglycerol synthase 1
mm9_v1_chr13_-_99660903_99660996	0.814541	CAGUGCA	BC055372|Tnpo1|238799|transportin 1	AK167049|Tnpo1|238799|transportin 1	AK045132|Tnpo1|238799|transportin 1	NM_001048267|Tnpo1|238799|transportin 1
mm9_v1_chr4_+_107474842_107475017	0.800194	CAGUGCA	NM_001080926|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D85463|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC127061|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	AJ312058|Lrp8|16975|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm9_v1_chr4_-_19636000_19636212	0.797323	CAGUGCA	AK137588|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	BC026829|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK168567|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK032232|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	AK042432|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1	NM_177327|Wwp1|107568|WW domain containing E3 ubiquitin protein ligase 1
mm9_v1_chr10_+_87323855_87324094	0.793628	CAGUGCA	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr2_-_59963796_59963833	0.793449	CAGUGCA	NM_001001182|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK147737|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr1_+_59030365_59030647	0.77536	CAGUGCA	AK140272|Stradb|227154|STE20-related kinase adaptor beta	NM_172656|Stradb|227154|STE20-related kinase adaptor beta	AK036678|Stradb|227154|STE20-related kinase adaptor beta	BC055814|Stradb|227154|STE20-related kinase adaptor beta	AK046790|Stradb|227154|STE20-related kinase adaptor beta	AK080096|Stradb|227154|STE20-related kinase adaptor beta	AK035207|Stradb|227154|STE20-related kinase adaptor beta	AK086974|Stradb|227154|STE20-related kinase adaptor beta	BC037003|Stradb|227154|STE20-related kinase adaptor beta	BC060956|Stradb|227154|STE20-related kinase adaptor beta	AK146079|Stradb|227154|STE20-related kinase adaptor beta	AB057666|Stradb|227154|STE20-related kinase adaptor beta	AB057667|Stradb|227154|STE20-related kinase adaptor beta
mm9_v1_chr4_+_53838895_53838980	0.76617	CAGUGCA	NM_028053|Tmem38b|52076|transmembrane protein 38B	AK005479|Tmem38b|52076|transmembrane protein 38B	BC011072|Tmem38b|52076|transmembrane protein 38B	AK150377|Tmem38b|52076|transmembrane protein 38B	AK150892|Tmem38b|52076|transmembrane protein 38B	AK153075|Tmem38b|52076|transmembrane protein 38B	AB261159|Tmem38b|52076|transmembrane protein 38B
mm9_v1_chr8_+_114060341_114060576	0.75019	CAGUGCA	AK079338|Znrf1|170737|zinc and ring finger 1	NM_001168621|Znrf1|170737|zinc and ring finger 1	NM_001168622|Znrf1|170737|zinc and ring finger 1	NM_133206|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr3_-_94386590_94386623	0.749454	CAGUGCA	AK147452|Snx27|76742|sorting nexin family member 27	NM_001082484|Snx27|76742|sorting nexin family member 27	NM_029721|Snx27|76742|sorting nexin family member 27
mm9_v1_chr19_+_37509290_37509343	0.748397	CAGUGCA	AK014111|Hhex|15242|hematopoietically expressed homeobox	AK033664|Hhex|15242|hematopoietically expressed homeobox	AK149553|Hhex|15242|hematopoietically expressed homeobox	NM_008245|Hhex|15242|hematopoietically expressed homeobox	BC057986|Hhex|15242|hematopoietically expressed homeobox
mm9_v1_chr19_-_18706239_18706339	0.735452	CAGUGCA	AK008123|Ostf1|20409|osteoclast stimulating factor 1	AK008467|Ostf1|20409|osteoclast stimulating factor 1	U58888|Ostf1|20409|osteoclast stimulating factor 1	AK145949|Ostf1|20409|osteoclast stimulating factor 1	AK005525|Ostf1|20409|osteoclast stimulating factor 1	AK150145|Ostf1|20409|osteoclast stimulating factor 1	AK155028|Ostf1|20409|osteoclast stimulating factor 1	AK149175|Ostf1|20409|osteoclast stimulating factor 1	AK002899|Ostf1|20409|osteoclast stimulating factor 1	AK010074|Ostf1|20409|osteoclast stimulating factor 1	NM_017375|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr11_+_121121273_121121393	0.72293	CAGUGCA	EU882160|Foxk2|68837|forkhead box K2	NM_001080932|Foxk2|68837|forkhead box K2	AK139325|Foxk2|68837|forkhead box K2
mm9_v1_chr6_+_145756902_145756931	0.721559	CAGUGCA	AF424737|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_027760|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC115779|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC117546|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm9_v1_chr11_-_101846064_101846112	0.719978	CAGUGCA	AF280809|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	AK008734|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	AK170772|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	NM_028207|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)	BC016269|Dusp3|72349|dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related)
mm9_v1_chr10_-_110447050_110447195	0.710138	CAGUGCA	BC027101|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK162922|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC080664|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC058772|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK046891|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC117788|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC117789|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK038670|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK038681|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK134967|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK039575|Zdhhc17|320150|zinc finger, DHHC domain containing 17	NM_172554|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK122406|Zdhhc17|320150|zinc finger, DHHC domain containing 17
mm9_v1_chr9_+_21903696_21903696	0.70569	CAGUGCA	NM_009922|Cnn1|12797|calponin 1
mm9_v1_chr6_+_113257130_113257306	0.704579	CAGUGCA	AK043372|Brpf1|78783|bromodomain and PHD finger containing, 1	AK156375|Brpf1|78783|bromodomain and PHD finger containing, 1	BC046521|Brpf1|78783|bromodomain and PHD finger containing, 1	NM_030178|Brpf1|78783|bromodomain and PHD finger containing, 1	AK177868|Brpf1|78783|bromodomain and PHD finger containing, 1	BC138361|Brpf1|78783|bromodomain and PHD finger containing, 1	BC145256|Brpf1|78783|bromodomain and PHD finger containing, 1
mm9_v1_chr11_-_119409041_119409133	0.700312	CAGUGCA	BC139018|Nptx1|18164|neuronal pentraxin 1	BC139020|Nptx1|18164|neuronal pentraxin 1	BC093479|Nptx1|18164|neuronal pentraxin 1	NM_008730|Nptx1|18164|neuronal pentraxin 1
mm9_v1_chr3_-_126701367_126701380	0.697641	CAGUGCA	AK032060|Ank2|109676|ankyrin 2, brain	NM_178655|Ank2|109676|ankyrin 2, brain
mm9_v1_chr4_-_126991216_126991282	0.691833	CAGUGCA	BC056613|Gja4|14612|gap junction protein, alpha 4	AF216832|Gja4|14612|gap junction protein, alpha 4	NM_008120|Gja4|14612|gap junction protein, alpha 4	AK143024|Gja4|14612|gap junction protein, alpha 4
mm9_v1_chr19_-_21547072_21547150	0.691795	CAGUGCA	AF174583|Gda|14544|guanine deaminase	AK044078|Gda|14544|guanine deaminase	AK173138|Gda|14544|guanine deaminase	AK041056|Gda|14544|guanine deaminase	AK079459|Gda|14544|guanine deaminase	AK157014|Gda|14544|guanine deaminase	NM_010266|Gda|14544|guanine deaminase
mm9_v1_chr1_-_172018982_172019074	0.688084	CAGUGCA	AK196844|Ddr2|18214|discoidin domain receptor family, member 2	NM_022563|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr12_-_103943059_103943209	0.686319	CAGUGCA	BC056464|Itpk1|217837|inositol 1,3,4-triphosphate 5/6 kinase	AK038913|Itpk1|217837|inositol 1,3,4-triphosphate 5/6 kinase	NM_172584|Itpk1|217837|inositol 1,3,4-triphosphate 5/6 kinase
mm9_v1_chr14_+_31292750_31292775	0.662504	CAGUGCA	AJ344447|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	NM_133761|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr2_-_179711350_179711395	0.661018	CAGUGCA	NM_001081092|Taf4a|228980|TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr5_-_147606370_147606581	0.660358	CAGUGCA	AK035629|Usp12|22217|ubiquitin specific peptidase 12	AK167153|Usp12|22217|ubiquitin specific peptidase 12	BC068136|Usp12|22217|ubiquitin specific peptidase 12	NM_011669|Usp12|22217|ubiquitin specific peptidase 12	AK006739|Usp12|22217|ubiquitin specific peptidase 12
mm9_v1_chr9_-_20781206_20781236	0.658732	CAGUGCA	AK170436|S1pr2|14739|sphingosine-1-phosphate receptor 2	AK085114|S1pr2|14739|sphingosine-1-phosphate receptor 2	NM_010333|S1pr2|14739|sphingosine-1-phosphate receptor 2
mm9_v1_chr9_-_119893775_119893775	0.657858	CAGUGCA	BC050066|Csrnp1|215418|cysteine-serine-rich nuclear protein 1	NM_153287|Csrnp1|215418|cysteine-serine-rich nuclear protein 1
mm9_v1_chr11_+_78141923_78141987	0.65562	CAGUGCA	BC058979|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	NM_201406|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK166408|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK033331|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK043232|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK053771|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK039604|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK045759|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK142871|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK158128|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK169633|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK153300|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK151858|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S	AK152229|Pigs|276846|phosphatidylinositol glycan anchor biosynthesis, class S
mm9_v1_chr2_-_153270059_153270214	0.655048	CAGUGCA	BC079552|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK157863|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK139459|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001001986|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr3_-_126646303_126646303	0.652984	CAGUGCA	BC043123|Ank2|109676|ankyrin 2, brain	NM_001034168|Ank2|109676|ankyrin 2, brain
mm9_v1_chr2_+_156665812_156665874	0.649857	CAGUGCA	AK029490|Tgif2|228839|TGFB-induced factor homeobox 2	NM_173396|Tgif2|228839|TGFB-induced factor homeobox 2	BC138706|Tgif2|228839|TGFB-induced factor homeobox 2	BC138705|Tgif2|228839|TGFB-induced factor homeobox 2	AK157623|Tgif2|228839|TGFB-induced factor homeobox 2	AK017884|Tgif2|228839|TGFB-induced factor homeobox 2
mm9_v1_chr2_-_166888514_166888514	0.634385	CAGUGCA	AK147564|Znfx1|98999|zinc finger, NFX1-type containing 1	AK147652|Znfx1|98999|zinc finger, NFX1-type containing 1	NM_001033196|Znfx1|98999|zinc finger, NFX1-type containing 1
mm9_v1_chr7_+_107621474_107621532	0.630021	CAGUGCA	BC098234|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	AB010742|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	NM_009464|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	BC055901|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	AF032902|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	AF053352|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)
mm9_v1_chr6_-_39370351_39370385	0.624407	CAGUGCA	BC003329|Mkrn1|54484|makorin, ring finger protein, 1	AK077060|Mkrn1|54484|makorin, ring finger protein, 1	NM_018810|Mkrn1|54484|makorin, ring finger protein, 1	AF192785|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr10_-_119638448_119638648	0.618675	CAGUGCA	AJ440757|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120829|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120831|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC144835|Irak3|73914|interleukin-1 receptor-associated kinase 3	AF461763|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK029057|Irak3|73914|interleukin-1 receptor-associated kinase 3	NM_028679|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK049210|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK014783|Irak3|73914|interleukin-1 receptor-associated kinase 3
mm9_v1_chr9_-_30729990_30730036	0.617041	CAGUGCA	BC094677|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15	NM_001024139|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm9_v1_chr11_+_105946215_105946222	0.615925	CAGUGCA	NM_011947|Map3k3|26406|mitogen-activated protein kinase kinase kinase 3	BC023781|Map3k3|26406|mitogen-activated protein kinase kinase kinase 3
mm9_v1_chr5_-_36873134_36873271	0.610663	CAGUGCA	AB064521|Tbc1d14|100855|TBC1 domain family, member 14	BC011420|Tbc1d14|100855|TBC1 domain family, member 14	AK013092|Tbc1d14|100855|TBC1 domain family, member 14	NM_001113364|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr6_+_91937103_91937154	0.608967	CAGUGCA	NM_172731|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5	BC145502|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5	BC150786|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5
mm9_v1_chr18_+_61085283_61085301	0.604744	CAGUGCA	AK083245|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK163179|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	NM_177407|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK122410|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X14836|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr2_+_4073908_4073934	0.601729	CAGUGCA	NM_172475|Frmd4a|209630|FERM domain containing 4A	AK034706|Frmd4a|209630|FERM domain containing 4A	BC058672|Frmd4a|209630|FERM domain containing 4A	AK163887|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr1_+_53353919_53353984	0.600532	CAGUGCA	NM_145517|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK050385|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK052927|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	AK077562|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC023695|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC025572|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)	BC012315|Ormdl1|227102|ORM1-like 1 (S. cerevisiae)
mm9_v1_chr10_+_93498745_93498948	0.594619	CAGUGCA	AK044341|Fgd6|13998|FYVE, RhoGEF and PH domain containing 6	NM_053072|Fgd6|13998|FYVE, RhoGEF and PH domain containing 6	AK173157|Fgd6|13998|FYVE, RhoGEF and PH domain containing 6	BC139019|Fgd6|13998|FYVE, RhoGEF and PH domain containing 6	BC139022|Fgd6|13998|FYVE, RhoGEF and PH domain containing 6
mm9_v1_chr12_+_37835132_37835270	0.584431	CAGUGCA	AK028352|Meox2|17286|mesenchyme homeobox 2	NM_008584|Meox2|17286|mesenchyme homeobox 2	AK031152|Meox2|17286|mesenchyme homeobox 2	BC002076|Meox2|17286|mesenchyme homeobox 2	AK142690|Meox2|17286|mesenchyme homeobox 2	Z16406|Meox2|17286|mesenchyme homeobox 2
mm9_v1_chr14_-_67691221_67691310	0.583089	CAGUGCA	BC080692|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK161704|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK167530|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK220192|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK161507|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	NM_028032|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK010380|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	BC065100|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK090027|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK164497|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK167189|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform
mm9_v1_chr3_-_116510948_116511083	0.580364	CAGUGCA	AK087855|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	AK041661|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	AK036225|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	NM_001081326|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm9_v1_chr17_+_29797537_29797684	0.578249	CAGUGCA	AK080379|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	NM_028791|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK049190|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK154773|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK042060|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK043733|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK088624|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK150392|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK151194|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152276|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152799|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153021|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153066|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	BC024691|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK005044|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152452|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK198101|Ftsjd2|74157|FtsJ methyltransferase domain containing 2
mm9_v1_chr10_+_102830353_102830476	0.573715	CAGUGCA	AK082286|Slc6a15|103098|solute carrier family 6 (neurotransmitter transporter), member 15	BC076593|Slc6a15|103098|solute carrier family 6 (neurotransmitter transporter), member 15	AK036136|Slc6a15|103098|solute carrier family 6 (neurotransmitter transporter), member 15	AY149281|Slc6a15|103098|solute carrier family 6 (neurotransmitter transporter), member 15	AY149280|Slc6a15|103098|solute carrier family 6 (neurotransmitter transporter), member 15	NM_175328|Slc6a15|103098|solute carrier family 6 (neurotransmitter transporter), member 15
mm9_v1_chr12_-_71203819_71203840	0.571525	CAGUGCA	AY515727|Nin|18080|ninein	NM_001081453|Nin|18080|ninein
mm9_v1_chr5_-_5380077_5380250	0.570463	CAGUGCA	AK129226|Cdk14|18647|cyclin-dependent kinase 14	AK016370|Cdk14|18647|cyclin-dependent kinase 14	AK051411|Cdk14|18647|cyclin-dependent kinase 14	AK083790|Cdk14|18647|cyclin-dependent kinase 14	AF033655|Cdk14|18647|cyclin-dependent kinase 14	AK051283|Cdk14|18647|cyclin-dependent kinase 14	AK045083|Cdk14|18647|cyclin-dependent kinase 14	NM_011074|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr17_+_26551909_26551909	0.567942	CAGUGCA	DQ839448|Neurl1b|240055|neuralized homolog 1b (Drosophila)	GQ414760|Neurl1b|240055|neuralized homolog 1b (Drosophila)	NM_001081656|Neurl1b|240055|neuralized homolog 1b (Drosophila)
mm9_v1_chr11_+_104469313_104469402	0.561722	CAGUGCA	BC125518|Itgb3|16416|integrin beta 3	BC125520|Itgb3|16416|integrin beta 3	NM_016780|Itgb3|16416|integrin beta 3	AK157958|Itgb3|16416|integrin beta 3	AF026509|Itgb3|16416|integrin beta 3	AY541673|Itgb3|16416|integrin beta 3	U83167|Itgb3|16416|integrin beta 3
mm9_v1_chr14_+_73909826_73909861	0.559936	CAGUGCA	AK145636|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK078288|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010270|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010686|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	BC024950|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	NM_026119|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)
mm9_v1_chr15_-_79572885_79572998	0.551852	CAGUGCA	BC098208|Sun2|223697|Sad1 and UNC84 domain containing 2	AK171058|Sun2|223697|Sad1 and UNC84 domain containing 2	AK046318|Sun2|223697|Sad1 and UNC84 domain containing 2	AK085196|Sun2|223697|Sad1 and UNC84 domain containing 2	AK128958|Sun2|223697|Sad1 and UNC84 domain containing 2	NM_194342|Sun2|223697|Sad1 and UNC84 domain containing 2	AK156246|Sun2|223697|Sad1 and UNC84 domain containing 2	AK172398|Sun2|223697|Sad1 and UNC84 domain containing 2
mm9_v1_chr2_+_4322020_4322021	0.551026	CAGUGCA	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr16_+_94791713_94791812	0.546754	CAGUGCA	NM_007890|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr2_+_91297678_91297857	0.546484	CAGUGCA	NM_001145857|Lrp4|228357|low density lipoprotein receptor-related protein 4	NM_172668|Lrp4|228357|low density lipoprotein receptor-related protein 4	BC132240|Lrp4|228357|low density lipoprotein receptor-related protein 4	AF247637|Lrp4|228357|low density lipoprotein receptor-related protein 4
mm9_v1_chr11_+_87574041_87574047	0.540478	CAGUGCA	AK043747|Bzrap1|207777|benzodiazepine receptor associated protein 1	NM_172449|Bzrap1|207777|benzodiazepine receptor associated protein 1
mm9_v1_chr16_-_22439642_22439745	0.537607	CAGUGCA	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr1_-_36330235_36330291	0.533289	CAGUGCA	BC056622|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	AF321278|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	NM_153408|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	AK040949|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)	AK156207|Neurl3|214854|neuralized homolog 3 homolog (Drosophila)
mm9_v1_chr6_-_86619001_86619180	0.531648	CAGUGCA	CT010233|Mxd1|17119|MAX dimerization protein 1	L38926|Mxd1|17119|MAX dimerization protein 1	X83106|Mxd1|17119|MAX dimerization protein 1	BC034860|Mxd1|17119|MAX dimerization protein 1	U20614|Mxd1|17119|MAX dimerization protein 1	AK036504|Mxd1|17119|MAX dimerization protein 1	AK151882|Mxd1|17119|MAX dimerization protein 1	AK153303|Mxd1|17119|MAX dimerization protein 1	AK151114|Mxd1|17119|MAX dimerization protein 1	AK151014|Mxd1|17119|MAX dimerization protein 1	AK151305|Mxd1|17119|MAX dimerization protein 1	NM_010751|Mxd1|17119|MAX dimerization protein 1
mm9_v1_chr19_+_37000568_37000661	0.531396	CAGUGCA	NM_001080706|Btaf1|107182|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm9_v1_chr10_+_40069113_40069226	0.530968	CAGUGCA	AK122421|Cdk19|78334|cyclin-dependent kinase 19	NM_001168304|Cdk19|78334|cyclin-dependent kinase 19	NM_198164|Cdk19|78334|cyclin-dependent kinase 19	AK053651|Cdk19|78334|cyclin-dependent kinase 19	BC137614|Cdk19|78334|cyclin-dependent kinase 19	BC144782|Cdk19|78334|cyclin-dependent kinase 19	BC080280|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr12_-_88541151_88541189	0.52481	CAGUGCA	AK147378|Tmed8|382620|transmembrane emp24 domain containing 8	NM_001033475|Tmed8|382620|transmembrane emp24 domain containing 8
mm9_v1_chr14_-_47441795_47441916	0.52433	CAGUGCA	AB001732|Gmfb|63985|glia maturation factor, beta	BC040233|Gmfb|63985|glia maturation factor, beta	AB050013|Gmfb|63985|glia maturation factor, beta	BC049134|Gmfb|63985|glia maturation factor, beta	AK013970|Gmfb|63985|glia maturation factor, beta	AK013947|Gmfb|63985|glia maturation factor, beta	AF297220|Gmfb|63985|glia maturation factor, beta	AK142014|Gmfb|63985|glia maturation factor, beta	NM_022023|Gmfb|63985|glia maturation factor, beta
mm9_v1_chr18_-_15562126_15562266	0.519233	CAGUGCA	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr19_-_57083064_57083064	0.511874	CAGUGCA	NM_001177796|Afap1l2|226250|actin filament associated protein 1-like 2	NM_001177797|Afap1l2|226250|actin filament associated protein 1-like 2	NM_146102|Afap1l2|226250|actin filament associated protein 1-like 2
mm9_v1_chr2_-_58419236_58419238	0.510296	CAGUGCA	AK150014|Acvr1|11477|activin A receptor, type 1	AK150075|Acvr1|11477|activin A receptor, type 1	NM_001110204|Acvr1|11477|activin A receptor, type 1	NM_001110205|Acvr1|11477|activin A receptor, type 1	NM_007394|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr3_+_135101664_135101764	0.510095	CAGUGCA	AK153111|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152231|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153410|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167801|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK151594|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK032885|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167077|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK090099|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC098220|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC024351|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK004001|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK049906|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_025356|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167650|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159546|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152541|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159963|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC057941|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK088448|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr8_-_42219037_42219129	0.507871	CAGUGCA	AK040710|Mtus1|102103|mitochondrial tumor suppressor 1	AK143781|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005863|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr2_+_4480799_4480871	0.501483	CAGUGCA	AK077327|Frmd4a|209630|FERM domain containing 4A	NM_001177844|Frmd4a|209630|FERM domain containing 4A	AK148414|Frmd4a|209630|FERM domain containing 4A	AK029073|Frmd4a|209630|FERM domain containing 4A	AK171532|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr7_-_112781902_112782053	0.498208	CAGUGCA	BC003347|Trim3|55992|tripartite motif-containing 3	AF220019|Trim3|55992|tripartite motif-containing 3	AK144674|Trim3|55992|tripartite motif-containing 3	NM_018880|Trim3|55992|tripartite motif-containing 3	AK170029|Trim3|55992|tripartite motif-containing 3	BC034263|Trim3|55992|tripartite motif-containing 3	AK019165|Trim3|55992|tripartite motif-containing 3
mm9_v1_chr7_+_133903118_133903185	0.497679	CAGUGCA	NM_011952|Mapk3|26417|mitogen-activated protein kinase 3	BC029712|Mapk3|26417|mitogen-activated protein kinase 3	Z14249|Mapk3|26417|mitogen-activated protein kinase 3
mm9_v1_chr7_-_120512849_120512864	0.49692	CAGUGCA	BC050781|Btbd10|68815|BTB (POZ) domain containing 10	NM_133700|Btbd10|68815|BTB (POZ) domain containing 10
mm9_v1_chr4_-_109959366_109959438	0.490729	CAGUGCA	BC048159|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163399|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_010488|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr14_+_64562509_64562560	0.48745	CAGUGCA	AK155670|Sox7|20680|SRY-box containing gene 7	AK156497|Sox7|20680|SRY-box containing gene 7	AK009704|Sox7|20680|SRY-box containing gene 7	AB023419|Sox7|20680|SRY-box containing gene 7	NM_011446|Sox7|20680|SRY-box containing gene 7	BC131936|Sox7|20680|SRY-box containing gene 7	BC145925|Sox7|20680|SRY-box containing gene 7
mm9_v1_chr15_-_50721552_50721725	0.481343	CAGUGCA	BC099962|Trps1|83925|trichorhinophalangeal syndrome I (human)	AF346836|Trps1|83925|trichorhinophalangeal syndrome I (human)	NM_032000|Trps1|83925|trichorhinophalangeal syndrome I (human)
mm9_v1_chr10_+_117066551_117066569	0.480728	CAGUGCA	NM_027468|Cpm|70574|carboxypeptidase M	BC055073|Cpm|70574|carboxypeptidase M	BC088735|Cpm|70574|carboxypeptidase M	BC100404|Cpm|70574|carboxypeptidase M	BC047389|Cpm|70574|carboxypeptidase M
mm9_v1_chrX_+_139115908_139116076	0.478602	CAGUGCA	AK166488|Tmem164|209497|transmembrane protein 164	BC056470|Tmem164|209497|transmembrane protein 164	NM_177592|Tmem164|209497|transmembrane protein 164
mm9_v1_chr14_-_49282546_49282546	0.472388	CAGUGCA	BC017609|Otx2|18424|orthodenticle homolog 2 (Drosophila)	NM_144841|Otx2|18424|orthodenticle homolog 2 (Drosophila)
mm9_v1_chr9_-_70504934_70505009	0.472256	CAGUGCA	BC058683|Fam63b|235461|family with sequence similarity 63, member B	AK046623|Fam63b|235461|family with sequence similarity 63, member B	BC049357|Fam63b|235461|family with sequence similarity 63, member B	AK046403|Fam63b|235461|family with sequence similarity 63, member B	AK035930|Fam63b|235461|family with sequence similarity 63, member B	NM_172772|Fam63b|235461|family with sequence similarity 63, member B	AK220158|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr12_-_28027541_28027588	0.471263	CAGUGCA	AK146514|Sox11|20666|SRY-box containing gene 11	AF009414|Sox11|20666|SRY-box containing gene 11	BC078643|Sox11|20666|SRY-box containing gene 11	AK165693|Sox11|20666|SRY-box containing gene 11	AK165005|Sox11|20666|SRY-box containing gene 11	NM_009234|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr9_+_108594470_108594519	0.465346	CAGUGCA	AF533977|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	NM_008924|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC080276|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC075623|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha
mm9_v1_chr12_-_80397239_80397289	0.465217	CAGUGCA	AK220333|Zfyve26|211978|zinc finger, FYVE domain containing 26	BC141359|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK132344|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK041668|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK135518|Zfyve26|211978|zinc finger, FYVE domain containing 26	NM_001008550|Zfyve26|211978|zinc finger, FYVE domain containing 26
mm9_v1_chr4_-_110024513_110024515	0.464868	CAGUGCA	AF041341|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001163397|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr4_+_33397279_33397404	0.464574	CAGUGCA	AK151463|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	NM_011884|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK150497|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160007|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK002922|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK079488|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK142016|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160706|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	BC043657|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK169305|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF034568|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF025653|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase
mm9_v1_chr7_-_117758413_117758468	0.463644	CAGUGCA	BC048706|Sbf2|319934|SET binding factor 2	AK080963|Sbf2|319934|SET binding factor 2	AK087396|Sbf2|319934|SET binding factor 2	AK080952|Sbf2|319934|SET binding factor 2	NM_177324|Sbf2|319934|SET binding factor 2	AK046622|Sbf2|319934|SET binding factor 2
mm9_v1_chr5_-_63157309_63157425	0.463446	CAGUGCA	AK037027|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	AK039153|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	AK041540|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	NM_178407|Arap2|212285|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm9_v1_chr18_+_53335981_53336033	0.461073	CAGUGCA	AK005470|Snx2|67804|sorting nexin 2	AK002692|Snx2|67804|sorting nexin 2	BC006960|Snx2|67804|sorting nexin 2	NM_026386|Snx2|67804|sorting nexin 2	AK010572|Snx2|67804|sorting nexin 2	AK075929|Snx2|67804|sorting nexin 2	AK153525|Snx2|67804|sorting nexin 2	CT010229|Snx2|67804|sorting nexin 2
mm9_v1_chr2_+_152561983_152562076	0.460486	CAGUGCA	M31885|Id1|15901|inhibitor of DNA binding 1	AK008264|Id1|15901|inhibitor of DNA binding 1	BC025073|Id1|15901|inhibitor of DNA binding 1	NM_010495|Id1|15901|inhibitor of DNA binding 1	U43884|Id1|15901|inhibitor of DNA binding 1	AB221668|Id1|15901|inhibitor of DNA binding 1	CT010243|Id1|15901|inhibitor of DNA binding 1
mm9_v1_chr11_-_113545329_113545497	0.455031	CAGUGCA	AK009763|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	AK159228|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	AK159659|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	AK017659|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	AK087540|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	AK028386|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed	NM_138598|D11Wsu99e|28081|DNA segment, Chr 11, Wayne State University 99, expressed
mm9_v1_chr15_-_73015345_73015397	0.45448	CAGUGCA	NM_153178|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2
mm9_v1_chr14_-_58444986_58445016	0.449771	CAGUGCA	AK166171|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	BC117500|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	BC117501|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	AK089223|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	NM_198605|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	AK158142|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene
mm9_v1_chr13_-_115892166_115892179	0.443401	CAGUGCA	AK035870|Itga1|109700|integrin alpha 1	NM_001033228|Itga1|109700|integrin alpha 1
mm9_v1_chr2_+_128689667_128689808	0.441811	CAGUGCA	NM_024237|Fbln7|70370|fibulin 7	AK005465|Fbln7|70370|fibulin 7	BC095941|Fbln7|70370|fibulin 7	EF668007|Fbln7|70370|fibulin 7
mm9_v1_chr11_+_94515080_94515111	0.439451	CAGUGCA	AK143575|Mrpl27|94064|mitochondrial ribosomal protein L27	BC030074|Mrpl27|94064|mitochondrial ribosomal protein L27	NM_053161|Mrpl27|94064|mitochondrial ribosomal protein L27	BC096568|Mrpl27|94064|mitochondrial ribosomal protein L27	AB049648|Mrpl27|94064|mitochondrial ribosomal protein L27	AK080324|Mrpl27|94064|mitochondrial ribosomal protein L27	AK080329|Mrpl27|94064|mitochondrial ribosomal protein L27
mm9_v1_chr8_-_129117310_129117573	0.434612	CAGUGCA	NM_001164598|Irf2bp2|270110|interferon regulatory factor 2 binding protein 2
mm9_v1_chr16_-_42340613_42340763	0.43407	CAGUGCA	AK031908|Gap43|14432|growth associated protein 43	BC080758|Gap43|14432|growth associated protein 43	BC028288|Gap43|14432|growth associated protein 43	NM_008083|Gap43|14432|growth associated protein 43
mm9_v1_chr1_-_138242666_138242682	0.427675	CAGUGCA	AK016014|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK028542|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK053092|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	NM_001081360|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1
mm9_v1_chr2_+_144194646_144194805	0.42759	CAGUGCA	NM_001164813|Pet117|100048644|cytochrome c oxidase assembly factor-like	BC033464|Csrp2bp|228714|cysteine and glycine-rich protein 2 binding protein	NM_001166640|Csrp2bp|228714|cysteine and glycine-rich protein 2 binding protein	BC031563|Csrp2bp|228714|cysteine and glycine-rich protein 2 binding protein	NM_181417|Csrp2bp|228714|cysteine and glycine-rich protein 2 binding protein
mm9_v1_chr2_-_73367455_73367546	0.42546	CAGUGCA	BC049788|Wipf1|215280|WAS/WASL interacting protein family, member 1	NM_153138|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr17_+_26813327_26813409	0.425245	CAGUGCA	AK017760|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	NM_025272|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK159669|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK134836|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK007610|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK008464|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK168015|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	BC024733|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK013229|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK030335|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E
mm9_v1_chr18_-_62071494_62071513	0.423059	CAGUGCA	NM_001164491|Ablim3|319713|actin binding LIM protein family, member 3
mm9_v1_chr18_-_62071451_62071482	0.420711	CAGUGCA	BC094229|Ablim3|319713|actin binding LIM protein family, member 3	AK082380|Ablim3|319713|actin binding LIM protein family, member 3	BC060275|Ablim3|319713|actin binding LIM protein family, member 3	NM_198649|Ablim3|319713|actin binding LIM protein family, member 3
mm9_v1_chr5_-_24414236_24414326	0.418572	CAGUGCA	AY348864|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	AK165834|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	AK010703|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_001170555|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_001170556|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr4_+_59202363_59202463	0.415622	CAGUGCA	AK138848|Ugcg|22234|UDP-glucose ceramide glucosyltransferase	BC050828|Ugcg|22234|UDP-glucose ceramide glucosyltransferase	NM_011673|Ugcg|22234|UDP-glucose ceramide glucosyltransferase
mm9_v1_chr5_-_24606422_24606505	0.407847	CAGUGCA	AK154296|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	NM_145401|Prkag2|108099|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm9_v1_chr12_-_60320438_60320474	0.405229	CAGUGCA	BC020022|Fbxo33|70611|F-box protein 33	NM_001033156|Fbxo33|70611|F-box protein 33
mm9_v1_chr4_-_109960078_109960115	0.401701	CAGUGCA	BC052451|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AF041342|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK079088|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001038698|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr13_-_99585403_99585403	0.39991	CAGUGCA	AK031041|Fcho2|218503|FCH domain only 2	NM_172591|Fcho2|218503|FCH domain only 2
mm9_v1_chr4_+_147314951_147315041	0.399892	CAGUGCA	AK011059|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK153761|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	NM_029841|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	BC012878|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK173332|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene
mm9_v1_chr4_+_47366162_47366183	0.395865	CAGUGCA	BC063260|Tgfbr1|21812|transforming growth factor, beta receptor I	NM_009370|Tgfbr1|21812|transforming growth factor, beta receptor I	D25540|Tgfbr1|21812|transforming growth factor, beta receptor I	CT010393|Tgfbr1|21812|transforming growth factor, beta receptor I	D28526|Tgfbr1|21812|transforming growth factor, beta receptor I
mm9_v1_chr7_-_53069599_53069692	0.394123	CAGUGCA	BC004662|Cyth2|19158|cytohesin 2	AB013466|Cyth2|19158|cytohesin 2	AK168979|Cyth2|19158|cytohesin 2	AK143829|Cyth2|19158|cytohesin 2	AK172050|Cyth2|19158|cytohesin 2	AF079971|Cyth2|19158|cytohesin 2	AK045451|Cyth2|19158|cytohesin 2	BC088833|Cyth2|19158|cytohesin 2	AK078067|Cyth2|19158|cytohesin 2	NM_001112701|Cyth2|19158|cytohesin 2	NM_011181|Cyth2|19158|cytohesin 2
mm9_v1_chr10_+_127774872_127774973	0.393902	CAGUGCA	BC013554|Cs|12974|citrate synthase	BC029754|Cs|12974|citrate synthase	NM_026444|Cs|12974|citrate synthase	AB056479|Cs|12974|citrate synthase
mm9_v1_chr1_-_128727208_128727208	0.393719	CAGUGCA	NM_001081756|Nckap5|210356|NCK-associated protein 5	NM_176957|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr7_-_74904546_74904632	0.392603	CAGUGCA	BC115442|Synm|233335|synemin, intermediate filament protein	BC115443|Synm|233335|synemin, intermediate filament protein	BC026872|Synm|233335|synemin, intermediate filament protein	BC040093|Synm|233335|synemin, intermediate filament protein	AJ579700|Synm|233335|synemin, intermediate filament protein	AJ579701|Synm|233335|synemin, intermediate filament protein	AJ579702|Synm|233335|synemin, intermediate filament protein	AK143019|Synm|233335|synemin, intermediate filament protein	NM_183312|Synm|233335|synemin, intermediate filament protein	NM_201639|Synm|233335|synemin, intermediate filament protein	NM_207663|Synm|233335|synemin, intermediate filament protein
mm9_v1_chr3_-_101640128_101640145	0.391505	CAGUGCA	NM_172295|Mab21l3|242125|mab-21-like 3 (C. elegans)
mm9_v1_chrX_+_33652066_33652189	0.391504	CAGUGCA	AK154675|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK089984|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC052425|Il13ra1|16164|interleukin 13 receptor, alpha 1	NM_133990|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK080147|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK143292|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK082889|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC059939|Il13ra1|16164|interleukin 13 receptor, alpha 1
mm9_v1_chr2_+_17976897_17976897	0.381501	CAGUGCA	BC070475|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_010804|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr16_-_8738377_8738512	0.381484	CAGUGCA	AF548565|Usp7|252870|ubiquitin specific peptidase 7	NM_001003918|Usp7|252870|ubiquitin specific peptidase 7	BC046963|Usp7|252870|ubiquitin specific peptidase 7
mm9_v1_chr8_-_122625167_122625371	0.37945	CAGUGCA	AK170923|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK172462|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK089681|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK090333|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK170639|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK157968|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK041905|Zdhhc7|102193|zinc finger, DHHC domain containing 7	BC075666|Zdhhc7|102193|zinc finger, DHHC domain containing 7	NM_133967|Zdhhc7|102193|zinc finger, DHHC domain containing 7
mm9_v1_chr5_-_36928872_36928874	0.376936	CAGUGCA	AK131724|Tbc1d14|100855|TBC1 domain family, member 14	AK029986|Tbc1d14|100855|TBC1 domain family, member 14	NM_001113362|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr10_-_92185071_92185164	0.369241	CAGUGCA	BC066870|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	D10712|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK090040|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK048393|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK085355|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	BC052430|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK010591|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	NM_008682|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK153746|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1
mm9_v1_chr6_+_134870418_134870458	0.366969	CAGUGCA	AK047669|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	NM_009875|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK050240|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK158411|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	BC014296|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr15_+_83393975_83394050	0.366034	CAGUGCA	NM_009775|Tspo|12257|translocator protein	AK151824|Tspo|12257|translocator protein	AK153273|Tspo|12257|translocator protein	AK165822|Tspo|12257|translocator protein	AK166125|Tspo|12257|translocator protein	AK151569|Tspo|12257|translocator protein	AK156489|Tspo|12257|translocator protein	AK172384|Tspo|12257|translocator protein	AK149743|Tspo|12257|translocator protein	AK151421|Tspo|12257|translocator protein	AK152860|Tspo|12257|translocator protein	AK153159|Tspo|12257|translocator protein	AK165450|Tspo|12257|translocator protein	AK150516|Tspo|12257|translocator protein	AK152082|Tspo|12257|translocator protein	AK152827|Tspo|12257|translocator protein	BC002055|Tspo|12257|translocator protein	D21207|Tspo|12257|translocator protein
mm9_v1_chr7_+_119902897_119902956	0.362941	CAGUGCA	NM_001166585|Tead1|21676|TEA domain family member 1	L06865|Tead1|21676|TEA domain family member 1	BC052021|Tead1|21676|TEA domain family member 1	BC060138|Tead1|21676|TEA domain family member 1
mm9_v1_chr3_+_21975544_21975859	0.36014	CAGUGCA	AK036064|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1	NM_030732|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1	AK033347|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1
mm9_v1_chr7_+_148317160_148317300	0.359042	CAGUGCA	AK036368|Ptdss2|27388|phosphatidylserine synthase 2	NM_013782|Ptdss2|27388|phosphatidylserine synthase 2	AK031906|Ptdss2|27388|phosphatidylserine synthase 2	AK048026|Ptdss2|27388|phosphatidylserine synthase 2	AK081275|Ptdss2|27388|phosphatidylserine synthase 2	AK021249|Ptdss2|27388|phosphatidylserine synthase 2	AK032686|Ptdss2|27388|phosphatidylserine synthase 2	AK137415|Ptdss2|27388|phosphatidylserine synthase 2	BC053517|Ptdss2|27388|phosphatidylserine synthase 2	AF099053|Ptdss2|27388|phosphatidylserine synthase 2
mm9_v1_chr3_-_103594950_103595238	0.351226	CAGUGCA	BC145697|Hipk1|15257|homeodomain interacting protein kinase 1	BC145699|Hipk1|15257|homeodomain interacting protein kinase 1	AF170303|Hipk1|15257|homeodomain interacting protein kinase 1	AF170304|Hipk1|15257|homeodomain interacting protein kinase 1	AF077658|Hipk1|15257|homeodomain interacting protein kinase 1	AK134408|Hipk1|15257|homeodomain interacting protein kinase 1	NM_010432|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr7_-_116895708_116895795	0.347286	CAGUGCA	AK009147|Tmem9b|56786|TMEM9 domain family, member B	AK077253|Tmem9b|56786|TMEM9 domain family, member B	AK007430|Tmem9b|56786|TMEM9 domain family, member B	BC002208|Tmem9b|56786|TMEM9 domain family, member B	NM_020050|Tmem9b|56786|TMEM9 domain family, member B	AK147127|Tmem9b|56786|TMEM9 domain family, member B
mm9_v1_chr10_+_17516024_17516131	0.338389	CAGUGCA	AK084639|Txlnb|378431|taxilin beta	NM_138628|Txlnb|378431|taxilin beta	AK084579|Txlnb|378431|taxilin beta	AK052324|Txlnb|378431|taxilin beta	AF422244|Txlnb|378431|taxilin beta	AF422245|Txlnb|378431|taxilin beta	AK137442|Txlnb|378431|taxilin beta	BC141023|Txlnb|378431|taxilin beta	AK085904|Txlnb|378431|taxilin beta
mm9_v1_chr6_-_100237331_100237351	0.338016	CAGUGCA	BC138324|Rybp|56353|RING1 and YY1 binding protein	BC138325|Rybp|56353|RING1 and YY1 binding protein	BC053016|Rybp|56353|RING1 and YY1 binding protein	NM_019743|Rybp|56353|RING1 and YY1 binding protein
mm9_v1_chr13_-_18035913_18036071	0.337804	CAGUGCA	AK013881|Rala|56044|v-ral simian leukemia viral oncogene homolog A (ras related)	BC031741|Rala|56044|v-ral simian leukemia viral oncogene homolog A (ras related)	NM_019491|Rala|56044|v-ral simian leukemia viral oncogene homolog A (ras related)
mm9_v1_chr12_+_4082573_4082658	0.3363	CAGUGCA	NM_153082|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC051140|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	AK049300|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC042643|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr4_+_125781197_125781263	0.335963	CAGUGCA	NM_001145827|Stk40|74178|serine/threonine kinase 40	NM_028800|Stk40|74178|serine/threonine kinase 40	AK154780|Stk40|74178|serine/threonine kinase 40	AY336057|Stk40|74178|serine/threonine kinase 40	BC046981|Stk40|74178|serine/threonine kinase 40
mm9_v1_chr9_-_57454023_57454087	0.329105	CAGUGCA	AY264290|Cplx3|235415|complexin 3	BC016632|Cplx3|235415|complexin 3	BC024854|Cplx3|235415|complexin 3	BC033343|Cplx3|235415|complexin 3	AK044211|Cplx3|235415|complexin 3	BC017128|Cplx3|235415|complexin 3	NM_146223|Cplx3|235415|complexin 3
mm9_v1_chr3_+_116297899_116297929	0.327328	CAGUGCA	AK013338|Sass6|72776|spindle assembly 6 homolog (C. elegans)	BC050110|Sass6|72776|spindle assembly 6 homolog (C. elegans)	NM_028349|Sass6|72776|spindle assembly 6 homolog (C. elegans)	AK145076|Sass6|72776|spindle assembly 6 homolog (C. elegans)	AK165224|Sass6|72776|spindle assembly 6 homolog (C. elegans)
mm9_v1_chr2_+_20431673_20431673	0.326657	CAGUGCA	AB125594|Etl4|208618|enhancer trap locus 4	AB125595|Etl4|208618|enhancer trap locus 4	NM_029895|Etl4|208618|enhancer trap locus 4	NM_178059|Etl4|208618|enhancer trap locus 4
mm9_v1_chr7_+_29573987_29573995	0.32494	CAGUGCA	BC044761|Rinl|320435|Ras and Rab interactor-like	BC046530|Rinl|320435|Ras and Rab interactor-like	NM_177158|Rinl|320435|Ras and Rab interactor-like	AK020687|Rinl|320435|Ras and Rab interactor-like	AK030993|Rinl|320435|Ras and Rab interactor-like
mm9_v1_chr14_+_73542316_73542336	0.320761	CAGUGCA	NM_001170694|Rcbtb2|105670|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	NM_134083|Rcbtb2|105670|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm9_v1_chr15_+_75447114_75447188	0.320277	CAGUGCA	NM_001044718|Zfp41|22701|zinc finger protein 41	NM_011759|Zfp41|22701|zinc finger protein 41	AK030420|Zfp41|22701|zinc finger protein 41	BC053927|Zfp41|22701|zinc finger protein 41
mm9_v1_chr7_-_149276174_149276174	0.316397	CAGUGCA	NM_008748|Dusp8|18218|dual specificity phosphatase 8	X95518|Dusp8|18218|dual specificity phosphatase 8
mm9_v1_chr17_-_88464582_88464624	0.315752	CAGUGCA	BC117884|Fbxo11|225055|F-box protein 11	BC117885|Fbxo11|225055|F-box protein 11	BC128479|Fbxo11|225055|F-box protein 11	NM_001081034|Fbxo11|225055|F-box protein 11
mm9_v1_chr2_-_169968174_169968177	0.313428	CAGUGCA	AK139547|Zfp217|228913|zinc finger protein 217	NM_001159683|Zfp217|228913|zinc finger protein 217	AK163381|Zfp217|228913|zinc finger protein 217
mm9_v1_chr9_-_63225646_63225720	0.311224	CAGUGCA	BC013697|Map2k5|23938|mitogen-activated protein kinase kinase 5	AB019374|Map2k5|23938|mitogen-activated protein kinase kinase 5	NM_011840|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK020716|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK159261|Map2k5|23938|mitogen-activated protein kinase kinase 5	AK166137|Map2k5|23938|mitogen-activated protein kinase kinase 5
mm9_v1_chr7_+_107756069_107756204	0.310402	CAGUGCA	AK169842|Rab6|19346|RAB6, member RAS oncogene family	NM_001163663|Rab6|19346|RAB6, member RAS oncogene family	NM_024287|Rab6|19346|RAB6, member RAS oncogene family	AK154012|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr15_-_31297286_31297513	0.308682	CAGUGCA	AK089667|Ankrd33b|67434|ankyrin repeat domain 33B	AK170894|Ankrd33b|67434|ankyrin repeat domain 33B	AK017844|Ankrd33b|67434|ankyrin repeat domain 33B	AK002572|Ankrd33b|67434|ankyrin repeat domain 33B	AK012871|Ankrd33b|67434|ankyrin repeat domain 33B	AK156757|Ankrd33b|67434|ankyrin repeat domain 33B	BC100327|Ankrd33b|67434|ankyrin repeat domain 33B	NM_001164441|Ankrd33b|67434|ankyrin repeat domain 33B	NM_026153|Ankrd33b|67434|ankyrin repeat domain 33B	NM_027496|Ankrd33b|67434|ankyrin repeat domain 33B
mm9_v1_chr8_-_80960532_80960550	0.308188	CAGUGCA	S68377|Pou4f2|18997|POU domain, class 4, transcription factor 2	AK084240|Pou4f2|18997|POU domain, class 4, transcription factor 2	AK087546|Pou4f2|18997|POU domain, class 4, transcription factor 2	NM_138944|Pou4f2|18997|POU domain, class 4, transcription factor 2
mm9_v1_chr2_+_145068346_145068346	0.306403	CAGUGCA	BC017615|Slc24a3|94249|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	NM_053195|Slc24a3|94249|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
mm9_v1_chr14_+_27852148_27852279	0.303939	CAGUGCA	AF494210|Il17rd|171463|interleukin 17 receptor D	NM_134437|Il17rd|171463|interleukin 17 receptor D	BC138629|Il17rd|171463|interleukin 17 receptor D	BC066804|Il17rd|171463|interleukin 17 receptor D	AF459444|Il17rd|171463|interleukin 17 receptor D
mm9_v1_chr17_-_82137708_82137731	0.303702	CAGUGCA	AF004666|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_001112798|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_011406|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	U70033|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	AK084813|D830013E24Rik|319510|RIKEN cDNA D830013E24 gene	AK085810|D830013E24Rik|319510|RIKEN cDNA D830013E24 gene
mm9_v1_chr9_-_45636638_45636736	0.30203	CAGUGCA	AK158671|Cep164|214552|centrosomal protein 164	NM_001081373|Cep164|214552|centrosomal protein 164
mm9_v1_chr18_+_49992650_49992666	0.299489	CAGUGCA	AY590892|Dmxl1|240283|Dmx-like 1	NM_001081371|Dmxl1|240283|Dmx-like 1
mm9_v1_chr5_+_34338625_34338665	0.299036	CAGUGCA	AK147307|Nat8l|269642|N-acetyltransferase 8-like	NM_001001985|Nat8l|269642|N-acetyltransferase 8-like
mm9_v1_chr14_+_48740495_48740543	0.292226	CAGUGCA	AK030564|Peli2|93834|pellino 2	AK045515|Peli2|93834|pellino 2	NM_033602|Peli2|93834|pellino 2
mm9_v1_chr13_-_107726930_107727002	0.285812	CAGUGCA	BC031900|Ipo11|76582|importin 11	BC029746|Ipo11|76582|importin 11	NM_029665|Ipo11|76582|importin 11
mm9_v1_chr7_+_28964486_28964515	0.281036	CAGUGCA	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr1_-_157820378_157820386	0.280021	CAGUGCA	AK044664|Cep350|74081|centrosomal protein 350	NM_001039184|Cep350|74081|centrosomal protein 350
mm9_v1_chr4_-_133843139_133843188	0.276218	CAGUGCA	AK053750|Pdik1l|230809|PDLIM1 interacting kinase 1 like	AK157013|Pdik1l|230809|PDLIM1 interacting kinase 1 like	BC027088|Pdik1l|230809|PDLIM1 interacting kinase 1 like	AK141566|Pdik1l|230809|PDLIM1 interacting kinase 1 like	AK139413|Pdik1l|230809|PDLIM1 interacting kinase 1 like	AK141823|Pdik1l|230809|PDLIM1 interacting kinase 1 like	AK162350|Pdik1l|230809|PDLIM1 interacting kinase 1 like	NM_001163794|Pdik1l|230809|PDLIM1 interacting kinase 1 like
mm9_v1_chr4_-_33010429_33010479	0.275726	CAGUGCA	BC065177|Ankrd6|140577|ankyrin repeat domain 6	NM_001012450|Ankrd6|140577|ankyrin repeat domain 6	NM_080471|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr8_-_83404377_83404428	0.273763	CAGUGCA	BC007483|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	NM_021356|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	AK155423|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	AK132176|Gab1|14388|growth factor receptor bound protein 2-associated protein 1
mm9_v1_chr11_-_106021399_106021524	0.273626	CAGUGCA	BC068130|Limd2|67803|LIM domain containing 2	AK049809|Limd2|67803|LIM domain containing 2	AK167349|Limd2|67803|LIM domain containing 2	AK169829|Limd2|67803|LIM domain containing 2	AK012581|Limd2|67803|LIM domain containing 2	AK032430|Limd2|67803|LIM domain containing 2	AK040486|Limd2|67803|LIM domain containing 2	NM_172397|Limd2|67803|LIM domain containing 2
mm9_v1_chr9_-_20264387_20264605	0.272766	CAGUGCA	AK141740|Zfp26|22688|zinc finger protein 26	AK029298|Zfp26|22688|zinc finger protein 26	AK017201|Zfp26|22688|zinc finger protein 26	AK082002|Zfp26|22688|zinc finger protein 26	NM_011753|Zfp26|22688|zinc finger protein 26	AK085739|Zfp26|22688|zinc finger protein 26
mm9_v1_chr4_-_147278927_147279021	0.272048	CAGUGCA	NM_133201|Mfn2|170731|mitofusin 2
mm9_v1_chr15_-_99602827_99602945	0.272015	CAGUGCA	AK146417|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK145589|Lass5|71949|LAG1 homolog, ceramide synthase 5	AY029533|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK075694|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK146220|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK145762|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK010241|Lass5|71949|LAG1 homolog, ceramide synthase 5	BC043059|Lass5|71949|LAG1 homolog, ceramide synthase 5	BC046797|Lass5|71949|LAG1 homolog, ceramide synthase 5	NM_028015|Lass5|71949|LAG1 homolog, ceramide synthase 5
mm9_v1_chr11_-_78510874_78510941	0.269899	CAGUGCA	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr11_-_96685326_96685440	0.269751	CAGUGCA	AK148471|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130453|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130454|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130451|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130452|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr12_-_5382487_5382487	0.267481	CAGUGCA	BC065168|Klhl29|208439|kelch-like 29 (Drosophila)	NM_001164493|Klhl29|208439|kelch-like 29 (Drosophila)
mm9_v1_chr8_-_8660610_8660772	0.260987	CAGUGCA	U30244|Efnb2|13642|ephrin B2	CT010381|Efnb2|13642|ephrin B2	U16819|Efnb2|13642|ephrin B2	L38847|Efnb2|13642|ephrin B2	NM_010111|Efnb2|13642|ephrin B2
mm9_v1_chr17_+_34807445_34807479	0.260687	CAGUGCA	AB235155|Tnxb|81877|tenascin XB	NM_031176|Tnxb|81877|tenascin XB
mm9_v1_chr10_+_115738429_115738633	0.255342	CAGUGCA	AK147439|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	AK147668|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	NM_029928|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	AY077755|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	BC141006|Ptprb|19263|protein tyrosine phosphatase, receptor type, B	BC145111|Ptprb|19263|protein tyrosine phosphatase, receptor type, B
mm9_v1_chr9_-_82869081_82869124	0.247459	CAGUGCA	NM_001081216|Phip|83946|pleckstrin homology domain interacting protein	AK032797|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr8_-_42127242_42127289	0.246583	CAGUGCA	AK030510|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005865|Mtus1|102103|mitochondrial tumor suppressor 1	AY626781|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr19_+_8945985_8946174	0.245054	CAGUGCA	AK172428|Ubxn1|225896|UBX domain protein 1	BC006701|Ubxn1|225896|UBX domain protein 1	NM_146093|Ubxn1|225896|UBX domain protein 1	AK015468|Ubxn1|225896|UBX domain protein 1	AK150442|Ubxn1|225896|UBX domain protein 1	AK159708|Ubxn1|225896|UBX domain protein 1
mm9_v1_chr3_+_88101037_88101138	0.242342	CAGUGCA	AK031293|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158223|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK089548|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK146360|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK161630|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK171160|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	NM_009836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	Z31556|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC054776|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK168052|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139465|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139467|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK154043|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158254|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158272|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK156836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)
mm9_v1_chr7_-_109213606_109213687	0.241294	CAGUGCA	AK078509|Rnf121|75212|ring finger protein 121	BC022686|Rnf121|75212|ring finger protein 121	NM_029211|Rnf121|75212|ring finger protein 121	AK168821|Rnf121|75212|ring finger protein 121	AK169089|Rnf121|75212|ring finger protein 121	AK159260|Rnf121|75212|ring finger protein 121
mm9_v1_chr6_+_108733041_108733073	0.241272	CAGUGCA	NM_026011|Arl8b|67166|ADP-ribosylation factor-like 8B	AK030689|Arl8b|67166|ADP-ribosylation factor-like 8B
mm9_v1_chr19_+_27397077_27397240	0.240192	CAGUGCA	BC046490|Kcnv2|240595|potassium channel, subfamily V, member 2	BC039042|Kcnv2|240595|potassium channel, subfamily V, member 2	NM_183179|Kcnv2|240595|potassium channel, subfamily V, member 2	AY238939|Kcnv2|240595|potassium channel, subfamily V, member 2
mm9_v1_chr19_-_19185685_19185685	0.237109	CAGUGCA	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chrX_-_71330931_71331012	0.237043	CAGUGCA	AF158181|Mecp2|17257|methyl CpG binding protein 2	NM_010788|Mecp2|17257|methyl CpG binding protein 2	AK041453|Mecp2|17257|methyl CpG binding protein 2	BC027153|Mecp2|17257|methyl CpG binding protein 2	AK158664|Mecp2|17257|methyl CpG binding protein 2	NM_001081979|Mecp2|17257|methyl CpG binding protein 2
mm9_v1_chr19_-_11893892_11893892	0.231145	CAGUGCA	BC056949|Stx3|20908|syntaxin 3	NM_001025307|Stx3|20908|syntaxin 3	NM_152220|Stx3|20908|syntaxin 3
mm9_v1_chr16_+_10488270_10488391	0.228116	CAGUGCA	AK040723|Ciita|12265|class II transactivator	AK155184|Ciita|12265|class II transactivator	AF042158|Ciita|12265|class II transactivator	AK153609|Ciita|12265|class II transactivator	NM_007575|Ciita|12265|class II transactivator	U60653|Ciita|12265|class II transactivator	BC107330|Ciita|12265|class II transactivator	BC107331|Ciita|12265|class II transactivator
mm9_v1_chr12_-_3309887_3309978	0.228039	CAGUGCA	AK134988|Rab10|19325|RAB10, member RAS oncogene family	AK150791|Rab10|19325|RAB10, member RAS oncogene family	AK153325|Rab10|19325|RAB10, member RAS oncogene family	BC052735|Rab10|19325|RAB10, member RAS oncogene family	BC056374|Rab10|19325|RAB10, member RAS oncogene family	AK160960|Rab10|19325|RAB10, member RAS oncogene family	AK150319|Rab10|19325|RAB10, member RAS oncogene family	AK153315|Rab10|19325|RAB10, member RAS oncogene family	AK159988|Rab10|19325|RAB10, member RAS oncogene family	AK168320|Rab10|19325|RAB10, member RAS oncogene family	AK087964|Rab10|19325|RAB10, member RAS oncogene family	AK159383|Rab10|19325|RAB10, member RAS oncogene family	AK159845|Rab10|19325|RAB10, member RAS oncogene family	AK028320|Rab10|19325|RAB10, member RAS oncogene family	AK166010|Rab10|19325|RAB10, member RAS oncogene family	AK045299|Rab10|19325|RAB10, member RAS oncogene family	AK008725|Rab10|19325|RAB10, member RAS oncogene family	AK146357|Rab10|19325|RAB10, member RAS oncogene family	NM_016676|Rab10|19325|RAB10, member RAS oncogene family
mm9_v1_chr11_-_68770359_68770398	0.218084	CAGUGCA	BC089365|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15	NM_177566|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15
mm9_v1_chr6_+_146673451_146673548	0.217851	CAGUGCA	NM_172734|Stk38l|232533|serine/threonine kinase 38 like	AK052288|Stk38l|232533|serine/threonine kinase 38 like	AK045971|Stk38l|232533|serine/threonine kinase 38 like	AY223819|Stk38l|232533|serine/threonine kinase 38 like
mm9_v1_chr2_+_20211539_20211581	0.214092	CAGUGCA	NM_001081006|Etl4|208618|enhancer trap locus 4
mm9_v1_chr4_+_126234210_126234268	0.214034	CAGUGCA	AK053847|Clspn|269582|claspin homolog (Xenopus laevis)	NM_175554|Clspn|269582|claspin homolog (Xenopus laevis)	AK045076|Clspn|269582|claspin homolog (Xenopus laevis)	AK135394|Clspn|269582|claspin homolog (Xenopus laevis)	AK051966|Clspn|269582|claspin homolog (Xenopus laevis)	BC050848|Clspn|269582|claspin homolog (Xenopus laevis)
mm9_v1_chr3_-_50247306_50247534	0.21398	CAGUGCA	AK162233|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK170568|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141402|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	BC141408|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AB022345|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766236|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AY766237|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK165599|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089202|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037742|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK076322|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK163168|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171252|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171327|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK089283|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK171192|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	AK037490|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	NM_011990|Slc7a11|26570|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm9_v1_chr7_+_129432585_129432762	0.213737	CAGUGCA	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr2_+_30122064_30122111	0.212217	CAGUGCA	NM_172267|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC132271|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC132273|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC145356|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC171925|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr19_-_29722826_29722925	0.211583	CAGUGCA	AK129447|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC086627|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK137206|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK037287|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC151181|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC151182|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC157914|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK041066|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK050284|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	NM_001081213|Ermp1|226090|endoplasmic reticulum metallopeptidase 1
mm9_v1_chr14_+_51715674_51715674	0.209475	CAGUGCA	AK159966|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_007447|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_201239|Rnase4|58809|ribonuclease, RNase A family 4
mm9_v1_chr2_-_52601140_52601264	0.208152	CAGUGCA	AK214650|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK004604|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	NM_019667|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AB012611|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK044230|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK159699|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK017668|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK078244|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK168729|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC013818|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ141211|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK035789|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
mm9_v1_chr2_-_127482430_127482430	0.20703	CAGUGCA	AK158653|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	NM_001171187|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	NM_010762|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein
mm9_v1_chr3_+_152059620_152059689	0.206192	CAGUGCA	BC060614|Zzz3|108946|zinc finger, ZZ domain containing 3	NM_198416|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr8_-_42140113_42140147	0.20515	CAGUGCA	BC043321|Mtus1|102103|mitochondrial tumor suppressor 1	AK043214|Mtus1|102103|mitochondrial tumor suppressor 1	AY626782|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005864|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr18_-_75120759_75120936	0.20367	CAGUGCA	BC020991|Lipg|16891|lipase, endothelial	AF118768|Lipg|16891|lipase, endothelial	AK090224|Lipg|16891|lipase, endothelial	AK152430|Lipg|16891|lipase, endothelial	AK152161|Lipg|16891|lipase, endothelial	AK153541|Lipg|16891|lipase, endothelial	AK152872|Lipg|16891|lipase, endothelial	AK172101|Lipg|16891|lipase, endothelial	NM_010720|Lipg|16891|lipase, endothelial
mm9_v1_chr11_-_96691261_96691289	0.202487	CAGUGCA	AK152040|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK153529|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_008686|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr15_+_88582086_88582189	0.202015	CAGUGCA	NM_181412|Zbed4|223773|zinc finger, BED domain containing 4	AK005794|Zbed4|223773|zinc finger, BED domain containing 4
mm9_v1_chr4_+_106323673_106323718	0.201971	CAGUGCA	NM_001083887|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	NM_172272|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	AK154150|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)	BC038817|Pars2|230577|prolyl-tRNA synthetase (mitochondrial)(putative)
mm9_v1_chr16_+_29579427_29579538	0.19709	CAGUGCA	AB044138|Opa1|74143|optic atrophy 1 homolog (human)	NM_133752|Opa1|74143|optic atrophy 1 homolog (human)	AK029157|Opa1|74143|optic atrophy 1 homolog (human)	AK053861|Opa1|74143|optic atrophy 1 homolog (human)	AK004715|Opa1|74143|optic atrophy 1 homolog (human)	AK030835|Opa1|74143|optic atrophy 1 homolog (human)	AK145620|Opa1|74143|optic atrophy 1 homolog (human)	AK038446|Opa1|74143|optic atrophy 1 homolog (human)	BC052704|Opa1|74143|optic atrophy 1 homolog (human)	AK050383|Opa1|74143|optic atrophy 1 homolog (human)	AK164872|Opa1|74143|optic atrophy 1 homolog (human)	AK044657|Opa1|74143|optic atrophy 1 homolog (human)	BC138665|Opa1|74143|optic atrophy 1 homolog (human)	BC145959|Opa1|74143|optic atrophy 1 homolog (human)
mm9_v1_chr13_+_81022644_81022695	0.196895	CAGUGCA	AK088288|Arrdc3|105171|arrestin domain containing 3	AK084951|Arrdc3|105171|arrestin domain containing 3	BC054844|Arrdc3|105171|arrestin domain containing 3	NM_001042591|Arrdc3|105171|arrestin domain containing 3	BC044762|Arrdc3|105171|arrestin domain containing 3	BC098474|Arrdc3|105171|arrestin domain containing 3	AK122499|Arrdc3|105171|arrestin domain containing 3
mm9_v1_chr1_+_43155550_43155613	0.19564	CAGUGCA	BC006931|AI597479|98404|expressed sequence AI597479	NM_133818|AI597479|98404|expressed sequence AI597479	AK081372|AI597479|98404|expressed sequence AI597479
mm9_v1_chr19_-_5912757_5912865	0.194379	CAGUGCA	U10435|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK215194|Dpf2|19708|D4, zinc and double PHD fingers family 2	BC012709|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK138047|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144848|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK019051|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144106|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK004812|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144954|Dpf2|19708|D4, zinc and double PHD fingers family 2	U43921|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK145851|Dpf2|19708|D4, zinc and double PHD fingers family 2	NM_011262|Dpf2|19708|D4, zinc and double PHD fingers family 2
mm9_v1_chr3_+_96361879_96362304	0.194247	CAGUGCA	AK089304|Txnip|56338|thioredoxin interacting protein	AK089403|Txnip|56338|thioredoxin interacting protein	NM_001009935|Txnip|56338|thioredoxin interacting protein	NM_023719|Txnip|56338|thioredoxin interacting protein	AK004653|Txnip|56338|thioredoxin interacting protein	AK082476|Txnip|56338|thioredoxin interacting protein	AK088870|Txnip|56338|thioredoxin interacting protein	AK089351|Txnip|56338|thioredoxin interacting protein	AK155517|Txnip|56338|thioredoxin interacting protein	AK171205|Txnip|56338|thioredoxin interacting protein	AK171312|Txnip|56338|thioredoxin interacting protein	AK171425|Txnip|56338|thioredoxin interacting protein	AK171456|Txnip|56338|thioredoxin interacting protein	AK171464|Txnip|56338|thioredoxin interacting protein	AK171527|Txnip|56338|thioredoxin interacting protein	BC031850|Txnip|56338|thioredoxin interacting protein	BC011212|Txnip|56338|thioredoxin interacting protein	AK187108|Txnip|56338|thioredoxin interacting protein	AF173681|Txnip|56338|thioredoxin interacting protein	AF282826|Txnip|56338|thioredoxin interacting protein	AK192038|Txnip|56338|thioredoxin interacting protein	AK214578|Txnip|56338|thioredoxin interacting protein
mm9_v1_chr5_+_34185760_34185844	0.1934	CAGUGCA	NM_001081102|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_001177884|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_175231|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	BC079668|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)
mm9_v1_chr1_+_161974503_161974570	0.192969	CAGUGCA	NM_001162896|4930523C07Rik|67647|RIKEN cDNA 4930523C07 gene	AK132698|4930523C07Rik|67647|RIKEN cDNA 4930523C07 gene	AK035814|4930523C07Rik|67647|RIKEN cDNA 4930523C07 gene	AK015875|4930523C07Rik|67647|RIKEN cDNA 4930523C07 gene
mm9_v1_chr9_+_108997946_108997990	0.191817	CAGUGCA	NM_172775|Plxnb1|235611|plexin B1
mm9_v1_chr9_+_56712850_56712966	0.191532	CAGUGCA	NM_139001|Cspg4|121021|chondroitin sulfate proteoglycan 4	AF352400|Cspg4|121021|chondroitin sulfate proteoglycan 4
mm9_v1_chr2_+_25227840_25227897	0.190074	CAGUGCA	NM_001081085|2010317E24Rik|72080|RIKEN cDNA 2010317E24 gene	AK154143|2010317E24Rik|72080|RIKEN cDNA 2010317E24 gene	BC070477|2010317E24Rik|72080|RIKEN cDNA 2010317E24 gene	AK008577|2010317E24Rik|72080|RIKEN cDNA 2010317E24 gene	AK164615|2010317E24Rik|72080|RIKEN cDNA 2010317E24 gene	AK166625|2010317E24Rik|72080|RIKEN cDNA 2010317E24 gene	AK077952|2010317E24Rik|72080|RIKEN cDNA 2010317E24 gene
mm9_v1_chr7_+_127821093_127821157	0.189654	CAGUGCA	NM_001164580|BC030336|233812|cDNA sequence BC030336
mm9_v1_chrX_-_98929396_98929485	0.185973	CAGUGCA	AF045146|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	BC096626|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	AB003174|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	NM_009910|Cxcr3|12766|chemokine (C-X-C motif) receptor 3
mm9_v1_chr11_-_103224633_103224824	0.185337	CAGUGCA	AK017636|Sh3d20|70559|SH3 domain containing 20	NM_183288|Sh3d20|70559|SH3 domain containing 20
mm9_v1_chr7_+_30768973_30768975	0.185038	CAGUGCA	AK148548|Zfp568|243905|zinc finger protein 568	AK166471|Zfp568|243905|zinc finger protein 568	NM_001033355|Zfp568|243905|zinc finger protein 568	NM_001167872|Zfp568|243905|zinc finger protein 568	NM_001167873|Zfp568|243905|zinc finger protein 568	AK143471|Zfp568|243905|zinc finger protein 568
mm9_v1_chr18_+_77183105_77183189	0.183014	CAGUGCA	NM_001039201|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2	AK147794|Hdhd2|76987|haloacid dehalogenase-like hydrolase domain containing 2
mm9_v1_chr2_+_20441139_20441459	0.182805	CAGUGCA	NM_001177630|Etl4|208618|enhancer trap locus 4	NM_001177631|Etl4|208618|enhancer trap locus 4	AK147510|Etl4|208618|enhancer trap locus 4	AB093289|Etl4|208618|enhancer trap locus 4	BC158051|Etl4|208618|enhancer trap locus 4	BC172143|Etl4|208618|enhancer trap locus 4	BC050016|Etl4|208618|enhancer trap locus 4	AK052733|Etl4|208618|enhancer trap locus 4
mm9_v1_chr3_+_115591053_115591114	0.181856	CAGUGCA	AK045127|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK046753|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK034652|Dph5|69740|DPH5 homolog (S. cerevisiae)	BC060372|Dph5|69740|DPH5 homolog (S. cerevisiae)	NM_027193|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK010475|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK045548|Dph5|69740|DPH5 homolog (S. cerevisiae)	AK046024|Dph5|69740|DPH5 homolog (S. cerevisiae)
mm9_v1_chr5_-_102498929_102498975	0.176853	CAGUGCA	AK047077|Wdfy3|72145|WD repeat and FYVE domain containing 3	AY336569|Wdfy3|72145|WD repeat and FYVE domain containing 3	NM_172882|Wdfy3|72145|WD repeat and FYVE domain containing 3
mm9_v1_chr14_-_122138082_122138150	0.176019	CAGUGCA	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr9_-_110379093_110379197	0.173723	CAGUGCA	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr15_+_6658368_6658402	0.171605	CAGUGCA	AK029196|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036149|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK036492|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK082586|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK087858|Rictor|78757|RPTOR independent companion of MTOR, complex 2	NM_030168|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY540053|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120903|Rictor|78757|RPTOR independent companion of MTOR, complex 2	BC120904|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK019537|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AK054119|Rictor|78757|RPTOR independent companion of MTOR, complex 2	AY497009|Rictor|78757|RPTOR independent companion of MTOR, complex 2
mm9_v1_chr2_+_57090045_57090088	0.170733	CAGUGCA	AK144716|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial	NM_001145820|Gpd2|14571|glycerol phosphate dehydrogenase 2, mitochondrial
mm9_v1_chr3_+_89635281_89635319	0.169584	CAGUGCA	AK034662|She|214547|src homology 2 domain-containing transforming protein E	AK157580|She|214547|src homology 2 domain-containing transforming protein E	NM_172530|She|214547|src homology 2 domain-containing transforming protein E	BC109362|She|214547|src homology 2 domain-containing transforming protein E	BC109363|She|214547|src homology 2 domain-containing transforming protein E
mm9_v1_chr15_-_96291163_96291288	0.168657	CAGUGCA	AK129478|Scaf11|72193|SR-related CTD-associated factor 11	AK034674|Scaf11|72193|SR-related CTD-associated factor 11	BC058682|Scaf11|72193|SR-related CTD-associated factor 11	NM_028148|Scaf11|72193|SR-related CTD-associated factor 11
mm9_v1_chr4_+_111087610_111087629	0.167905	CAGUGCA	AK075885|Bend5|67621|BEN domain containing 5	NM_026279|Bend5|67621|BEN domain containing 5	AK014057|Bend5|67621|BEN domain containing 5
mm9_v1_chr8_-_13974679_13974776	0.166005	CAGUGCA	BC099613|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK166972|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK166875|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK077810|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	BC132465|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	BC132467|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	BC145286|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	AK163687|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene	NM_173744|2610019F03Rik|72148|RIKEN cDNA 2610019F03 gene
mm9_v1_chr8_+_127386922_127387009	0.163915	CAGUGCA	NM_010322|Gnpat|14712|glyceronephosphate O-acyltransferase	AK004771|Gnpat|14712|glyceronephosphate O-acyltransferase	AK010896|Gnpat|14712|glyceronephosphate O-acyltransferase	AK004630|Gnpat|14712|glyceronephosphate O-acyltransferase	AK166997|Gnpat|14712|glyceronephosphate O-acyltransferase	AF110769|Gnpat|14712|glyceronephosphate O-acyltransferase	BC003225|Gnpat|14712|glyceronephosphate O-acyltransferase	AK150810|Gnpat|14712|glyceronephosphate O-acyltransferase	BC025972|Gnpat|14712|glyceronephosphate O-acyltransferase
mm9_v1_chr16_-_31081444_31081521	0.163042	CAGUGCA	BC031419|AI480653|268880|expressed sequence AI480653	AK166259|AI480653|268880|expressed sequence AI480653	AK154256|AI480653|268880|expressed sequence AI480653	NM_198626|AI480653|268880|expressed sequence AI480653
mm9_v1_chr2_+_180921963_180922240	0.162731	CAGUGCA	AK002602|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC058516|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK154758|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK166314|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC100439|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK003282|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	NM_025598|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012327|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012037|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK014211|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC029225|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC091753|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012545|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene
mm9_v1_chr18_-_31606908_31607087	0.16129	CAGUGCA	BC052738|Syt4|20983|synaptotagmin IV	BC058208|Syt4|20983|synaptotagmin IV	AK050515|Syt4|20983|synaptotagmin IV	AK220264|Syt4|20983|synaptotagmin IV	AK148681|Syt4|20983|synaptotagmin IV	AK043985|Syt4|20983|synaptotagmin IV	AK083960|Syt4|20983|synaptotagmin IV	AK032106|Syt4|20983|synaptotagmin IV	NM_009308|Syt4|20983|synaptotagmin IV
mm9_v1_chr9_+_64808638_64808765	0.160388	CAGUGCA	NM_001077631|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	AK169772|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	AK035654|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	AK041578|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	AK086850|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	BC024913|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	AK032095|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	NM_175153|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene	AK050654|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene
mm9_v1_chr10_-_128133261_128133372	0.157854	CAGUGCA	AK144551|Rab5b|19344|RAB5B, member RAS oncogene family	AK083034|Rab5b|19344|RAB5B, member RAS oncogene family	AK081251|Rab5b|19344|RAB5B, member RAS oncogene family	NM_177411|Rab5b|19344|RAB5B, member RAS oncogene family
mm9_v1_chr11_+_43342241_43342329	0.156759	CAGUGCA	AK143205|Ccnjl|380694|cyclin J-like	NM_001045530|Ccnjl|380694|cyclin J-like
mm9_v1_chr12_+_25516433_25516564	0.154905	CAGUGCA	NM_001083341|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	NM_026037|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK076045|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK012931|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK031682|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK031824|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK033106|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK034873|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	BC025020|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AK215458|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AB297383|Mboat2|67216|membrane bound O-acyltransferase domain containing 2	AB305046|Mboat2|67216|membrane bound O-acyltransferase domain containing 2
mm9_v1_chr4_-_94269846_94269942	0.153719	CAGUGCA	BC139773|Plaa|18786|phospholipase A2, activating protein	AK075934|Plaa|18786|phospholipase A2, activating protein	BC139355|Plaa|18786|phospholipase A2, activating protein	BC139356|Plaa|18786|phospholipase A2, activating protein	NM_172695|Plaa|18786|phospholipase A2, activating protein	AK019070|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr2_+_157854457_157854551	0.151741	CAGUGCA	BC028819|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	BC042447|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	BC054350|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	NM_027434|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	AK139995|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B
mm9_v1_chr15_-_11925724_11925789	0.15097	CAGUGCA	J03750|Sub1|20024|SUB1 homolog (S. cerevisiae)	BC010967|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK146335|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK154114|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK049260|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK132021|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK151734|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK048371|Sub1|20024|SUB1 homolog (S. cerevisiae)	NM_011294|Sub1|20024|SUB1 homolog (S. cerevisiae)
mm9_v1_chr15_+_83998239_83998332	0.150648	CAGUGCA	NM_054088|Pnpla3|116939|patatin-like phospholipase domain containing 3	BC028792|Pnpla3|116939|patatin-like phospholipase domain containing 3	AY037763|Pnpla3|116939|patatin-like phospholipase domain containing 3	AK158566|Pnpla3|116939|patatin-like phospholipase domain containing 3
mm9_v1_chr7_-_96487247_96487305	0.149865	CAGUGCA	AK013269|Tmem135|72759|transmembrane protein 135	AK028846|Tmem135|72759|transmembrane protein 135	AK047200|Tmem135|72759|transmembrane protein 135	BC033279|Tmem135|72759|transmembrane protein 135	NM_028343|Tmem135|72759|transmembrane protein 135
mm9_v1_chr14_+_58691522_58691522	0.147527	CAGUGCA	AK158782|Fgf9|14180|fibroblast growth factor 9	NM_013518|Fgf9|14180|fibroblast growth factor 9
mm9_v1_chr3_+_89240625_89240684	0.145738	CAGUGCA	NM_146131|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK028858|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159422|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159448|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK160103|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159633|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK028754|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	BC027771|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK170318|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	BC034200|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1
mm9_v1_chr16_+_94792513_94792513	0.144122	CAGUGCA	NM_001113389|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr11_-_96690784_96690815	0.144119	CAGUGCA	AK154167|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK085935|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_001130450|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr15_+_84753817_84753857	0.14409	CAGUGCA	AK141750|Nup50|18141|nucleoporin 50	AK165581|Nup50|18141|nucleoporin 50	AK133562|Nup50|18141|nucleoporin 50	BC060234|Nup50|18141|nucleoporin 50	AK161713|Nup50|18141|nucleoporin 50	BC065102|Nup50|18141|nucleoporin 50	AK087706|Nup50|18141|nucleoporin 50	AK168888|Nup50|18141|nucleoporin 50	AK151947|Nup50|18141|nucleoporin 50	AK152309|Nup50|18141|nucleoporin 50	BC059239|Nup50|18141|nucleoporin 50	NM_016714|Nup50|18141|nucleoporin 50
mm9_v1_chr4_+_154783298_154783366	0.143461	CAGUGCA	AK008257|2010015L04Rik|544678|RIKEN cDNA 2010015L04 gene	NM_001166029|2010015L04Rik|544678|RIKEN cDNA 2010015L04 gene	NM_177674|2010015L04Rik|544678|RIKEN cDNA 2010015L04 gene	AK134858|2010015L04Rik|544678|RIKEN cDNA 2010015L04 gene	BC056495|2010015L04Rik|544678|RIKEN cDNA 2010015L04 gene
mm9_v1_chr8_+_3655765_3655792	0.142927	CAGUGCA	AK131613|Retn|57264|resistin	AF323080|Retn|57264|resistin	AK131869|Retn|57264|resistin	AF290870|Retn|57264|resistin	NM_022984|Retn|57264|resistin	BC051196|Retn|57264|resistin
mm9_v1_chr8_-_46418352_46418573	0.141669	CAGUGCA	BC138967|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	BC138968|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AB056457|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AK165754|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AK004724|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	AK150653|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3	NM_133969|Cyp4v3|102294|cytochrome P450, family 4, subfamily v, polypeptide 3
mm9_v1_chr2_-_132403964_132404008	0.141587	CAGUGCA	AK031658|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042671|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042672|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_028802|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm9_v1_chr11_+_52045464_52045596	0.138334	CAGUGCA	NM_011543|Skp1a|21402|S-phase kinase-associated protein 1A	AK078330|Skp1a|21402|S-phase kinase-associated protein 1A	AK002983|Skp1a|21402|S-phase kinase-associated protein 1A	AK012498|Skp1a|21402|S-phase kinase-associated protein 1A	AK014245|Skp1a|21402|S-phase kinase-associated protein 1A	AK027909|Skp1a|21402|S-phase kinase-associated protein 1A	AK088339|Skp1a|21402|S-phase kinase-associated protein 1A	AK160198|Skp1a|21402|S-phase kinase-associated protein 1A	AK158209|Skp1a|21402|S-phase kinase-associated protein 1A	AK166673|Skp1a|21402|S-phase kinase-associated protein 1A	AK152609|Skp1a|21402|S-phase kinase-associated protein 1A	Z47088|Skp1a|21402|S-phase kinase-associated protein 1A	BC002115|Skp1a|21402|S-phase kinase-associated protein 1A	AF083214|Skp1a|21402|S-phase kinase-associated protein 1A
mm9_v1_chr4_-_9596206_9596308	0.137667	CAGUGCA	BC015281|Asph|65973|aspartate-beta-hydroxylase	AF289486|Asph|65973|aspartate-beta-hydroxylase	AF289487|Asph|65973|aspartate-beta-hydroxylase	AF289488|Asph|65973|aspartate-beta-hydroxylase	AK030293|Asph|65973|aspartate-beta-hydroxylase	AK032420|Asph|65973|aspartate-beta-hydroxylase	AK151787|Asph|65973|aspartate-beta-hydroxylase	AK049506|Asph|65973|aspartate-beta-hydroxylase	AK139566|Asph|65973|aspartate-beta-hydroxylase	AK160984|Asph|65973|aspartate-beta-hydroxylase	AK165260|Asph|65973|aspartate-beta-hydroxylase	BC061098|Asph|65973|aspartate-beta-hydroxylase	NM_001177849|Asph|65973|aspartate-beta-hydroxylase	NM_001177850|Asph|65973|aspartate-beta-hydroxylase	NM_001177851|Asph|65973|aspartate-beta-hydroxylase	NM_001177855|Asph|65973|aspartate-beta-hydroxylase	NM_001177856|Asph|65973|aspartate-beta-hydroxylase	NM_023066|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr2_-_169956719_169956719	0.137326	CAGUGCA	AK156475|Zfp217|228913|zinc finger protein 217	NM_001033299|Zfp217|228913|zinc finger protein 217
mm9_v1_chr18_+_80403593_80403727	0.13707	CAGUGCA	BC031634|Txnl4a|27366|thioredoxin-like 4A	BC014770|Txnl4a|27366|thioredoxin-like 4A	NM_001042408|Txnl4a|27366|thioredoxin-like 4A	AK011717|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr18_-_80904852_80904931	0.135863	CAGUGCA	EU887569|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887571|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887572|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AF049606|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK004810|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164111|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164112|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_016791|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr12_-_112615921_112615933	0.135583	CAGUGCA	NM_183016|Cdc42bpb|217866|CDC42 binding protein kinase beta
mm9_v1_chr8_-_23916037_23916141	0.135251	CAGUGCA	BC030484|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	BC027301|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK017991|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK134634|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK082988|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK080668|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK081220|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AY039763|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK077365|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_001122820|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_029505|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit
mm9_v1_chr3_+_101180976_101181070	0.134896	CAGUGCA	AK083000|Igsf3|78908|immunoglobulin superfamily, member 3	AK084011|Igsf3|78908|immunoglobulin superfamily, member 3	AK129151|Igsf3|78908|immunoglobulin superfamily, member 3	NM_207205|Igsf3|78908|immunoglobulin superfamily, member 3
mm9_v1_chr14_+_117324518_117324572	0.132239	CAGUGCA	AK164668|Gpc6|23888|glypican 6	AK135442|Gpc6|23888|glypican 6	NM_001079844|Gpc6|23888|glypican 6	NM_011821|Gpc6|23888|glypican 6
mm9_v1_chr17_-_26078825_26078928	0.129634	CAGUGCA	AK155173|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK016852|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK137390|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK033349|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK170431|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AB008895|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	BC014287|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	NM_011822|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK163680|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK169284|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q
mm9_v1_chr3_+_88520743_88520881	0.129107	CAGUGCA	NM_001163310|Rit1|19769|Ras-like without CAAX 1	NM_009069|Rit1|19769|Ras-like without CAAX 1	AK014126|Rit1|19769|Ras-like without CAAX 1	AK164196|Rit1|19769|Ras-like without CAAX 1	AK005357|Rit1|19769|Ras-like without CAAX 1	AK168254|Rit1|19769|Ras-like without CAAX 1	BC012694|Rit1|19769|Ras-like without CAAX 1	AK018785|Rit1|19769|Ras-like without CAAX 1	U71205|Rit1|19769|Ras-like without CAAX 1
mm9_v1_chr4_-_134088666_134088667	0.128632	CAGUGCA	AK146416|Fam54b|76824|family with sequence similarity 54, member B	AK164004|Fam54b|76824|family with sequence similarity 54, member B	BC026808|Fam54b|76824|family with sequence similarity 54, member B	NM_029759|Fam54b|76824|family with sequence similarity 54, member B	AK216840|Fam54b|76824|family with sequence similarity 54, member B
mm9_v1_chr10_+_7512691_7512745	0.127318	CAGUGCA	AK017370|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	NM_026141|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014453|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK011443|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK013377|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014406|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK049634|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK164127|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167258|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK012371|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167168|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	BC079912|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4
mm9_v1_chr11_-_104303565_104303604	0.12699	CAGUGCA	AK153679|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	AK122484|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	NM_001081045|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene
mm9_v1_chr13_-_19711409_19711707	0.12232	CAGUGCA	DQ914440|Epdr1|105298|ependymin related protein 1 (zebrafish)	AF353717|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK192851|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK160413|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK166252|Epdr1|105298|ependymin related protein 1 (zebrafish)	BC014708|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK034083|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK038733|Epdr1|105298|ependymin related protein 1 (zebrafish)	AK046185|Epdr1|105298|ependymin related protein 1 (zebrafish)	NM_134065|Epdr1|105298|ependymin related protein 1 (zebrafish)
mm9_v1_chr4_+_64785207_64785207	0.122077	CAGUGCA	NM_021362|Pappa|18491|pregnancy-associated plasma protein A
mm9_v1_chr6_-_93863547_93863683	0.121679	CAGUGCA	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr10_+_84849558_84849599	0.121079	CAGUGCA	BC096535|Btbd11|74007|BTB (POZ) domain containing 11	NM_028709|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr16_-_30587549_30587690	0.120313	CAGUGCA	AK146895|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK030940|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK145186|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK135345|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK078501|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	BC043724|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	NM_178069|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)	AK132527|Lsg1|224092|large subunit GTPase 1 homolog (S. cerevisiae)
mm9_v1_chr1_-_172145521_172145534	0.116815	CAGUGCA	BC058732|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	NM_010633|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	AK013347|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr10_+_122115755_122115904	0.115369	CAGUGCA	AK043121|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_001110218|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	NM_176919|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK040207|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK077422|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK134804|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK051434|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK220260|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr7_-_126138689_126138754	0.115188	CAGUGCA	NM_001195774|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B	NM_022420|Gprc5b|64297|G protein-coupled receptor, family C, group 5, member B
mm9_v1_chrX_-_156576261_156576298	0.113659	CAGUGCA	BC007142|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	NM_008810|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK148459|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK167987|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1
mm9_v1_chr13_-_30077931_30077931	0.113102	CAGUGCA	AK133828|E2f3|13557|E2F transcription factor 3	NM_010093|E2f3|13557|E2F transcription factor 3
mm9_v1_chr9_-_88376937_88377419	0.110547	CAGUGCA	BC080309|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC108363|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK083398|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK077588|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC050079|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC055863|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK076026|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AB035725|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK034845|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC041148|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC058807|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019666|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019796|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein
mm9_v1_chr16_+_4684069_4684136	0.109919	CAGUGCA	NM_001135112|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	NM_023646|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK167511|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK031250|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK004910|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	BC027240|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK004575|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK007852|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	BC003920|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3
mm9_v1_chr11_+_101121880_101121955	0.106	CAGUGCA	BC037114|Wnk4|69847|WNK lysine deficient protein kinase 4	NM_175638|Wnk4|69847|WNK lysine deficient protein kinase 4	AY184228|Wnk4|69847|WNK lysine deficient protein kinase 4	BC096453|Wnk4|69847|WNK lysine deficient protein kinase 4	AY260059|Wnk4|69847|WNK lysine deficient protein kinase 4	AY187027|Wnk4|69847|WNK lysine deficient protein kinase 4
mm9_v1_chrX_+_69062091_69062188	0.104965	CAGUGCA	NM_001081356|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049488|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK138582|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK011632|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK008848|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK045401|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK164163|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AJ748652|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC094639|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	AK049296|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	BC028317|Vma21|67048|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
mm9_v1_chr1_+_44176812_44176851	0.104086	CAGUGCA	AK047404|Bivm|246229|basic, immunoglobulin-like variable motif containing	NM_144558|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK032375|Bivm|246229|basic, immunoglobulin-like variable motif containing	AK034329|Bivm|246229|basic, immunoglobulin-like variable motif containing
mm9_v1_chr11_-_97049185_97049278	0.099571	CAGUGCA	BC055115|Kpnb1|16211|karyopherin (importin) beta 1	AK077709|Kpnb1|16211|karyopherin (importin) beta 1	NM_008379|Kpnb1|16211|karyopherin (importin) beta 1	AK147175|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr3_+_87774988_87775050	0.0979573	CAGUGCA	AK031207|Nes|18008|nestin	AK012622|Nes|18008|nestin	BC062893|Nes|18008|nestin	NM_016701|Nes|18008|nestin	BC060693|Nes|18008|nestin	AF076623|Nes|18008|nestin
mm9_v1_chr12_-_93024875_93024875	0.097584	CAGUGCA	AK036612|Ston2|108800|stonin 2	NM_175367|Ston2|108800|stonin 2
mm9_v1_chr19_+_5637459_5637550	0.0970762	CAGUGCA	AK155321|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK158072|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	BC094053|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	NM_009045|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr1_-_128389495_128389552	0.096343	CAGUGCA	BC066095|Nckap5|210356|NCK-associated protein 5	BC079551|Nckap5|210356|NCK-associated protein 5	NM_172484|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr2_+_153067186_153067388	0.0954784	CAGUGCA	NM_080463|Pofut1|140484|protein O-fucosyltransferase 1	BC046295|Pofut1|140484|protein O-fucosyltransferase 1	AK135635|Pofut1|140484|protein O-fucosyltransferase 1	AK044629|Pofut1|140484|protein O-fucosyltransferase 1	AF375885|Pofut1|140484|protein O-fucosyltransferase 1	AK037857|Pofut1|140484|protein O-fucosyltransferase 1	AK081059|Pofut1|140484|protein O-fucosyltransferase 1	AK132301|Pofut1|140484|protein O-fucosyltransferase 1	AK170038|Pofut1|140484|protein O-fucosyltransferase 1
mm9_v1_chr6_-_85283412_85283433	0.095407	CAGUGCA	AK036285|Sfxn5|94282|sideroflexin 5	AK043706|Sfxn5|94282|sideroflexin 5	AK082073|Sfxn5|94282|sideroflexin 5	AK038793|Sfxn5|94282|sideroflexin 5	NM_178639|Sfxn5|94282|sideroflexin 5
mm9_v1_chr14_+_51710751_51710835	0.0949423	CAGUGCA	NM_001161731|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_021472|Rnase4|58809|ribonuclease, RNase A family 4	AK076504|Rnase4|58809|ribonuclease, RNase A family 4	BC066843|Rnase4|58809|ribonuclease, RNase A family 4	AK171251|Ang|11727|angiogenin, ribonuclease, RNase A family, 5
mm9_v1_chr15_-_74583382_74583477	0.0932606	CAGUGCA	AF141377|Lynx1|23936|Ly6/neurotoxin 1	AK013827|Lynx1|23936|Ly6/neurotoxin 1	NM_011838|Lynx1|23936|Ly6/neurotoxin 1	AK165295|Lynx1|23936|Ly6/neurotoxin 1	AK165314|Lynx1|23936|Ly6/neurotoxin 1	AK162920|Lynx1|23936|Ly6/neurotoxin 1	AK161907|Lynx1|23936|Ly6/neurotoxin 1
mm9_v1_chr3_-_86978431_86978668	0.0925187	CAGUGCA	BC023765|Kirrel|170643|kin of IRRE like (Drosophila)	AK158381|Kirrel|170643|kin of IRRE like (Drosophila)	NM_001170985|Kirrel|170643|kin of IRRE like (Drosophila)	NM_130867|Kirrel|170643|kin of IRRE like (Drosophila)
mm9_v1_chr18_+_80403581_80403591	0.0919409	CAGUGCA	BC025053|Txnl4a|27366|thioredoxin-like 4A	NM_178604|Txnl4a|27366|thioredoxin-like 4A	AK171121|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr5_+_87233514_87233581	0.0915159	CAGUGCA	NM_177680|Ythdc1|231386|YTH domain containing 1
mm9_v1_chr8_-_18950870_18950974	0.0909087	CAGUGCA	BC098477|Xkr5|319581|X Kell blood group precursor-related family, member 5	AK045098|Xkr5|319581|X Kell blood group precursor-related family, member 5	AK030692|Xkr5|319581|X Kell blood group precursor-related family, member 5	NM_001113350|Xkr5|319581|X Kell blood group precursor-related family, member 5	NM_176951|Xkr5|319581|X Kell blood group precursor-related family, member 5	AY534251|Xkr5|319581|X Kell blood group precursor-related family, member 5
mm9_v1_chr2_+_130732201_130732231	0.0905084	CAGUGCA	AK155069|Atrn|11990|attractin	AF116897|Atrn|11990|attractin	NM_009730|Atrn|11990|attractin
mm9_v1_chr15_-_99358387_99358595	0.0904204	CAGUGCA	AK158960|Faim2|72393|Fas apoptotic inhibitory molecule 2	NM_001038658|Faim2|72393|Fas apoptotic inhibitory molecule 2	NM_028224|Faim2|72393|Fas apoptotic inhibitory molecule 2	BC072560|Faim2|72393|Fas apoptotic inhibitory molecule 2
mm9_v1_chr4_+_137150067_137150162	0.0902198	CAGUGCA	AK166158|Usp48|170707|ubiquitin specific peptidase 48	NM_130879|Usp48|170707|ubiquitin specific peptidase 48	AK220190|Usp48|170707|ubiquitin specific peptidase 48	BC021769|Usp48|170707|ubiquitin specific peptidase 48	AK052297|Usp48|170707|ubiquitin specific peptidase 48
mm9_v1_chr2_+_163428044_163428072	0.0879006	CAGUGCA	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr2_-_25052245_25052332	0.0856281	CAGUGCA	BC013092|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK155540|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	NM_146115|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene
mm9_v1_chr1_-_135817945_135817982	0.0855513	CAGUGCA	AK037150|Prelp|116847|proline arginine-rich end leucine-rich repeat	BC019775|Prelp|116847|proline arginine-rich end leucine-rich repeat	AK047480|Prelp|116847|proline arginine-rich end leucine-rich repeat	NM_054077|Prelp|116847|proline arginine-rich end leucine-rich repeat
mm9_v1_chr1_+_95700522_95700570	0.0826138	CAGUGCA	AK028397|Ing5|66262|inhibitor of growth family, member 5	NM_025454|Ing5|66262|inhibitor of growth family, member 5	AK007536|Ing5|66262|inhibitor of growth family, member 5	BC064674|Ing5|66262|inhibitor of growth family, member 5	AK009312|Ing5|66262|inhibitor of growth family, member 5	AK028010|Ing5|66262|inhibitor of growth family, member 5	AK145695|Ing5|66262|inhibitor of growth family, member 5
mm9_v1_chr5_-_31456576_31456630	0.0810415	CAGUGCA	BC013452|Mpv17|17527|MpV17 mitochondrial inner membrane protein	AK040477|Mpv17|17527|MpV17 mitochondrial inner membrane protein	M36411|Mpv17|17527|MpV17 mitochondrial inner membrane protein	NM_008622|Mpv17|17527|MpV17 mitochondrial inner membrane protein
mm9_v1_chr16_-_32003226_32003372	0.0804635	CAGUGCA	AK158338|Senp5|320213|SUMO/sentrin specific peptidase 5	AY522918|Senp5|320213|SUMO/sentrin specific peptidase 5	BC080830|Senp5|320213|SUMO/sentrin specific peptidase 5	AK043171|Senp5|320213|SUMO/sentrin specific peptidase 5	AK042087|Senp5|320213|SUMO/sentrin specific peptidase 5	AK028177|Senp5|320213|SUMO/sentrin specific peptidase 5	NM_177103|Senp5|320213|SUMO/sentrin specific peptidase 5
mm9_v1_chr8_+_123059756_123059756	0.0787125	CAGUGCA	AK033263|Gse1|382034|genetic suppressor element 1	NM_001145897|Gse1|382034|genetic suppressor element 1
mm9_v1_chr4_+_115511802_115511871	0.0769877	CAGUGCA	AK141298|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	AK010697|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	AK169982|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	Y11091|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	AK155934|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	NM_021461|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1	BC021369|Mknk1|17346|MAP kinase-interacting serine/threonine kinase 1
mm9_v1_chr9_+_106073255_106073259	0.074018	CAGUGCA	AK037620|Wdr82|77305|WD repeat domain containing 82	AK035109|Wdr82|77305|WD repeat domain containing 82	AK149692|Wdr82|77305|WD repeat domain containing 82	AK159240|Wdr82|77305|WD repeat domain containing 82	AK172474|Wdr82|77305|WD repeat domain containing 82	NM_029896|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr5_-_36925021_36925045	0.0736991	CAGUGCA	BC042515|Tbc1d14|100855|TBC1 domain family, member 14	NM_133910|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr17_-_25073897_25073943	0.0699971	CAGUGCA	BC068312|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	AB005662|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	AF262046|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	AF178637|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	BC065105|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	NM_001163447|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	NM_001163448|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	NM_001163449|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	NM_001163450|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	NM_001163451|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	NM_001163453|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3	NM_013931|Mapk8ip3|30957|mitogen-activated protein kinase 8 interacting protein 3
mm9_v1_chr11_-_95375878_95375924	0.0699328	CAGUGCA	AK158760|Nxph3|104079|neurexophilin 3	NM_130858|Nxph3|104079|neurexophilin 3
mm9_v1_chr3_+_88639149_88639197	0.0693005	CAGUGCA	NM_027389|Gon4l|76022|gon-4-like (C.elegans)	AK147575|Gon4l|76022|gon-4-like (C.elegans)	BC037148|Gon4l|76022|gon-4-like (C.elegans)
mm9_v1_chr8_+_107749072_107749302	0.0687824	CAGUGCA	AK156120|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	NM_145604|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC057919|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK051965|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK166937|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066141|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066826|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC006874|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene
mm9_v1_chr8_-_114045980_114046012	0.0679133	CAGUGCA	BC066082|Wdr59|319481|WD repeat domain 59	EF011622|Wdr59|319481|WD repeat domain 59	AK170910|Wdr59|319481|WD repeat domain 59	NM_001170742|Wdr59|319481|WD repeat domain 59	NM_001170743|Wdr59|319481|WD repeat domain 59	NM_176923|Wdr59|319481|WD repeat domain 59
mm9_v1_chr11_-_86922163_86922249	0.0675728	CAGUGCA	AK040348|Prr11|270906|proline rich 11	AK047463|Prr11|270906|proline rich 11	AK083651|Prr11|270906|proline rich 11	NM_175563|Prr11|270906|proline rich 11
mm9_v1_chr6_-_56873822_56873940	0.0673557	CAGUGCA	AK011894|Nt5c3|107569|5'-nucleotidase, cytosolic III	AK011525|Nt5c3|107569|5'-nucleotidase, cytosolic III	NM_026004|Nt5c3|107569|5'-nucleotidase, cytosolic III
mm9_v1_chr8_-_112261607_112261664	0.0672166	CAGUGCA	AK089170|Atxn1l|52335|ataxin 1-like	NM_001080930|Atxn1l|52335|ataxin 1-like	AK172521|Atxn1l|52335|ataxin 1-like
mm9_v1_chr6_+_105627738_105627848	0.0653248	CAGUGCA	NM_001109749|Cntn4|269784|contactin 4	NM_173004|Cntn4|269784|contactin 4	AK036262|Cntn4|269784|contactin 4	BC115766|Cntn4|269784|contactin 4
mm9_v1_chr4_+_45861687_45861850	0.0636018	CAGUGCA	AK045033|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	NM_028788|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK050152|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK050348|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene	AK004855|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene
mm9_v1_chr7_-_73572306_73572369	0.0627447	CAGUGCA	BC058277|Aldh1a3|56847|aldehyde dehydrogenase family 1, subfamily A3	AF246711|Aldh1a3|56847|aldehyde dehydrogenase family 1, subfamily A3	AF280404|Aldh1a3|56847|aldehyde dehydrogenase family 1, subfamily A3	AF152359|Aldh1a3|56847|aldehyde dehydrogenase family 1, subfamily A3	AF253409|Aldh1a3|56847|aldehyde dehydrogenase family 1, subfamily A3	AK147006|Aldh1a3|56847|aldehyde dehydrogenase family 1, subfamily A3	NM_053080|Aldh1a3|56847|aldehyde dehydrogenase family 1, subfamily A3
mm9_v1_chr3_+_96500993_96501007	0.0608885	CAGUGCA	NM_001165949|Pias3|229615|protein inhibitor of activated STAT 3	NM_018812|Pias3|229615|protein inhibitor of activated STAT 3
mm9_v1_chr11_+_6295127_6295189	0.058351	CAGUGCA	NM_001005867|Zmiz2|52915|zinc finger, MIZ-type containing 2	BC060652|Zmiz2|52915|zinc finger, MIZ-type containing 2
mm9_v1_chr10_+_85061155_85061265	0.058312	CAGUGCA	NM_001017525|Btbd11|74007|BTB (POZ) domain containing 11	AK044022|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr3_+_92054568_92054677	0.0579688	CAGUGCA	NM_001164787|Sprr2a2|100303744|small proline-rich protein 2A2	NM_011468|Sprr2a1|20755|small proline-rich protein 2A1	AK003391|Sprr2a1|20755|small proline-rich protein 2A1	AK007633|Sprr2a1|20755|small proline-rich protein 2A1	AK008887|Sprr2a1|20755|small proline-rich protein 2A1	AK147183|Sprr2a1|20755|small proline-rich protein 2A1	AK009238|Sprr2a1|20755|small proline-rich protein 2A1	AK168529|Sprr2a1|20755|small proline-rich protein 2A1	AY158986|Sprr2a1|20755|small proline-rich protein 2A1	AK008631|Sprr2a1|20755|small proline-rich protein 2A1	AK009790|Sprr2a1|20755|small proline-rich protein 2A1	BC010818|Sprr2a2|100303744|small proline-rich protein 2A2	AK007928|Sprr2a2|100303744|small proline-rich protein 2A2
mm9_v1_chr13_+_49703402_49703439	0.0576602	CAGUGCA	AK028300|Ogn|18295|osteoglycin	AK160760|Ogn|18295|osteoglycin	AK053650|Ogn|18295|osteoglycin	NM_008760|Ogn|18295|osteoglycin
mm9_v1_chr5_-_109089782_109089839	0.0576438	CAGUGCA	BC062929|Dgkq|110524|diacylglycerol kinase, theta	NM_199011|Dgkq|110524|diacylglycerol kinase, theta	AK170840|Dgkq|110524|diacylglycerol kinase, theta	BC066012|Dgkq|110524|diacylglycerol kinase, theta	AK048764|Dgkq|110524|diacylglycerol kinase, theta	AK132151|Dgkq|110524|diacylglycerol kinase, theta
mm9_v1_chr4_+_14791353_14791554	0.0574457	CAGUGCA	AK049213|Tmem55a|72519|transmembrane protein 55A	NM_028264|Tmem55a|72519|transmembrane protein 55A	AK033845|Tmem55a|72519|transmembrane protein 55A	AK012054|Tmem55a|72519|transmembrane protein 55A	AX775959|Tmem55a|72519|transmembrane protein 55A	BC021435|Tmem55a|72519|transmembrane protein 55A	AK206695|Tmem55a|72519|transmembrane protein 55A
mm9_v1_chr18_-_61885933_61886002	0.0554395	CAGUGCA	AF041060|Grpel2|17714|GrpE-like 2, mitochondrial	BC094583|Grpel2|17714|GrpE-like 2, mitochondrial	BC068232|Grpel2|17714|GrpE-like 2, mitochondrial	AK012634|Grpel2|17714|GrpE-like 2, mitochondrial	AK134455|Grpel2|17714|GrpE-like 2, mitochondrial	AK003011|Grpel2|17714|GrpE-like 2, mitochondrial	AK082983|Grpel2|17714|GrpE-like 2, mitochondrial	BC120747|Grpel2|17714|GrpE-like 2, mitochondrial	AK145493|Grpel2|17714|GrpE-like 2, mitochondrial	NM_021296|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr18_-_38760921_38761068	0.0551791	CAGUGCA	BC050944|Spry4|24066|sprouty homolog 4 (Drosophila)	BC057005|Spry4|24066|sprouty homolog 4 (Drosophila)	NM_011898|Spry4|24066|sprouty homolog 4 (Drosophila)	AK139816|Spry4|24066|sprouty homolog 4 (Drosophila)	AB019280|Spry4|24066|sprouty homolog 4 (Drosophila)	AK037180|Spry4|24066|sprouty homolog 4 (Drosophila)	AK048122|Spry4|24066|sprouty homolog 4 (Drosophila)	AF176906|Spry4|24066|sprouty homolog 4 (Drosophila)
mm9_v1_chr2_-_120178819_120178881	0.0551508	CAGUGCA	BC007479|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281050|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281051|Vps39|269338|vacuolar protein sorting 39 (yeast)	AB028844|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK141424|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK038824|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK042253|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK154103|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK170831|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK171008|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK159889|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK160109|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK084743|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_147153|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_178851|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK140041|Vps39|269338|vacuolar protein sorting 39 (yeast)
mm9_v1_chr11_+_74644411_74644428	0.0537017	CAGUGCA	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr6_-_72330414_72330474	0.0527125	CAGUGCA	BC086925|Vamp5|53620|vesicle-associated membrane protein 5	AK009266|Vamp5|53620|vesicle-associated membrane protein 5	NM_001080742|Vamp5|53620|vesicle-associated membrane protein 5	NM_016872|Vamp5|53620|vesicle-associated membrane protein 5
mm9_v1_chr4_-_119165183_119165252	0.052605	CAGUGCA	BC057371|Rimkla|194237|ribosomal modification protein rimK-like family member A	AK163360|Rimkla|194237|ribosomal modification protein rimK-like family member A	AK047164|Rimkla|194237|ribosomal modification protein rimK-like family member A	NM_177572|Rimkla|194237|ribosomal modification protein rimK-like family member A
mm9_v1_chr5_-_52581705_52581765	0.0518297	CAGUGCA	BC003745|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC100343|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK146441|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK145983|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK151015|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK151757|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK149869|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK168323|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK168835|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK169174|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	NM_001042620|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	NM_007839|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr14_+_75684171_75684233	0.0514228	CAGUGCA	NM_026083|Zc3h13|67302|zinc finger CCCH type containing 13	AK013285|Zc3h13|67302|zinc finger CCCH type containing 13	AK078225|Zc3h13|67302|zinc finger CCCH type containing 13	BC138264|Zc3h13|67302|zinc finger CCCH type containing 13
mm9_v1_chr2_+_167757825_167757866	0.0507298	CAGUGCA	AK157431|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	NM_011201|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK165567|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr4_+_150229178_150229242	0.0495846	CAGUGCA	AK004851|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK166791|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK167359|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK168797|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK139780|Errfi1|74155|ERBB receptor feedback inhibitor 1	BC005546|Errfi1|74155|ERBB receptor feedback inhibitor 1	NM_133753|Errfi1|74155|ERBB receptor feedback inhibitor 1	AK167156|Errfi1|74155|ERBB receptor feedback inhibitor 1
mm9_v1_chr10_+_127114119_127114144	0.048349	CAGUGCA	BC030440|Tmem194|210035|transmembrane protein 194	NM_001113211|Tmem194|210035|transmembrane protein 194	NM_173732|Tmem194|210035|transmembrane protein 194	AK129110|Tmem194|210035|transmembrane protein 194	AK090031|Tmem194|210035|transmembrane protein 194
mm9_v1_chr14_+_31638767_31638861	0.0479758	CAGUGCA	AK007740|Tmem110|69179|transmembrane protein 110	NM_028839|Tmem110|69179|transmembrane protein 110	AK009341|Tmem110|69179|transmembrane protein 110	AK076341|Tmem110|69179|transmembrane protein 110	AK149088|Tmem110|69179|transmembrane protein 110	AK155257|Tmem110|69179|transmembrane protein 110
mm9_v1_chr5_-_123439064_123439107	0.0475456	CAGUGCA	BC065090|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK043352|Kdm2b|30841|lysine (K)-specific demethylase 2B	NM_001003953|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK136625|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr5_+_119010687_119010751	0.0444813	CAGUGCA	AK088795|Med13l|76199|mediator complex subunit 13-like	NM_172424|Med13l|76199|mediator complex subunit 13-like	AK154895|Med13l|76199|mediator complex subunit 13-like	AY338464|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr6_-_119280616_119280791	0.0440326	CAGUGCA	AK039006|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2	AK045494|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2	BC058944|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2	NM_172492|Lrtm2|211187|leucine-rich repeats and transmembrane domains 2
mm9_v1_chr6_-_37391993_37392195	0.0429329	CAGUGCA	BC138470|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	BC138471|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	BC043466|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK041050|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK035695|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK036712|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK042418|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK041669|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	NM_178661|Creb3l2|208647|cAMP responsive element binding protein 3-like 2
mm9_v1_chr12_-_70782807_70782838	0.0427212	CAGUGCA	NM_001135559|Sos2|20663|son of sevenless homolog 2 (Drosophila)
mm9_v1_chr8_+_123061308_123061392	0.0422923	CAGUGCA	NM_001145896|Gse1|382034|genetic suppressor element 1	AK154829|Gse1|382034|genetic suppressor element 1	AK042915|Gse1|382034|genetic suppressor element 1
mm9_v1_chr5_-_123438517_123438541	0.0420372	CAGUGCA	NM_001005866|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr11_-_101949793_101949840	0.0419042	CAGUGCA	AK172253|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	AF162685|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	AK161577|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	BC053026|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	NM_016695|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm9_v1_chr14_-_122097583_122097657	0.0403698	CAGUGCA	BC157964|Dock9|105445|dedicator of cytokinesis 9	NM_001081039|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr4_-_33037783_33037814	0.0398171	CAGUGCA	AK135024|Ankrd6|140577|ankyrin repeat domain 6	NM_001012451|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr3_+_152058937_152059038	0.0395072	CAGUGCA	NM_001080755|Zzz3|108946|zinc finger, ZZ domain containing 3	AK131150|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr10_+_79689342_79689484	0.0388247	CAGUGCA	AK158750|Mum1|68114|melanoma associated antigen (mutated) 1	NM_023431|Mum1|68114|melanoma associated antigen (mutated) 1	AK159972|Mum1|68114|melanoma associated antigen (mutated) 1	AK170459|Mum1|68114|melanoma associated antigen (mutated) 1	AK154610|Mum1|68114|melanoma associated antigen (mutated) 1
mm9_v1_chr2_+_13995715_13995918	0.0375455	CAGUGCA	AK144987|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK169170|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	BC044666|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	NM_011484|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK157767|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK162431|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK163720|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	BC055326|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK163922|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK035924|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK147832|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	U43900|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1	AK179759|Stam|20844|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm9_v1_chr6_-_112897259_112897274	0.0370782	CAGUGCA	AK045508|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	AK051262|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	NM_080448|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr9_+_70390523_70390626	0.0365498	CAGUGCA	AK077578|Sltm|66660|SAFB-like, transcription modulator	NM_026337|Sltm|66660|SAFB-like, transcription modulator	AK078251|Sltm|66660|SAFB-like, transcription modulator	AK011815|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr8_-_18741546_18741552	0.0337493	CAGUGCA	AK143974|Angpt2|11601|angiopoietin 2	AK019860|Angpt2|11601|angiopoietin 2	NM_007426|Angpt2|11601|angiopoietin 2
mm9_v1_chr6_+_29383152_29383347	0.0335739	CAGUGCA	NM_001081185|Flnc|68794|filamin C, gamma	AK051985|Flnc|68794|filamin C, gamma	BC151097|Flnc|68794|filamin C, gamma	BC158128|Flnc|68794|filamin C, gamma	BC172159|Flnc|68794|filamin C, gamma
mm9_v1_chr7_+_97278722_97279067	0.0328838	CAGUGCA	AK170373|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC025566|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	NM_146194|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC057683|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC021491|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AK144960|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC023843|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AK220291|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	BC011470|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AK162360|Picalm|233489|phosphatidylinositol binding clathrin assembly protein	AY206701|Picalm|233489|phosphatidylinositol binding clathrin assembly protein
mm9_v1_chr6_-_71212223_71212274	0.032866	CAGUGCA	AK027936|Smyd1|12180|SET and MYND domain containing 1	AK076266|Smyd1|12180|SET and MYND domain containing 1	AK142153|Smyd1|12180|SET and MYND domain containing 1	U76373|Smyd1|12180|SET and MYND domain containing 1	U76374|Smyd1|12180|SET and MYND domain containing 1	AK142252|Smyd1|12180|SET and MYND domain containing 1	BC076601|Smyd1|12180|SET and MYND domain containing 1	NM_001160127|Smyd1|12180|SET and MYND domain containing 1	NM_009762|Smyd1|12180|SET and MYND domain containing 1
mm9_v1_chr6_+_91162756_91162777	0.0319222	CAGUGCA	NM_001081437|Fbln2|14115|fibulin 2	NM_007992|Fbln2|14115|fibulin 2	BC005443|Fbln2|14115|fibulin 2
mm9_v1_chr17_+_79336458_79336518	0.0282002	CAGUGCA	NM_028611|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene	AK010752|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene	AK090097|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene	BC108350|2410091C18Rik|73694|RIKEN cDNA 2410091C18 gene
mm9_v1_chr17_-_33897428_33897430	0.0281692	CAGUGCA	NM_008997|Rab11b|19326|RAB11B, member RAS oncogene family
mm9_v1_chr18_-_10181789_10181789	0.0250088	CAGUGCA	BC057154|Rock1|19877|Rho-associated coiled-coil containing protein kinase 1	NM_009071|Rock1|19877|Rho-associated coiled-coil containing protein kinase 1
mm9_v1_chr5_+_23606402_23606481	0.0245833	CAGUGCA	NM_001161800|Klhl7|52323|kelch-like 7 (Drosophila)	NM_026448|Klhl7|52323|kelch-like 7 (Drosophila)	AK083358|Klhl7|52323|kelch-like 7 (Drosophila)	AK089072|Klhl7|52323|kelch-like 7 (Drosophila)	AK012326|Klhl7|52323|kelch-like 7 (Drosophila)	BC029154|Klhl7|52323|kelch-like 7 (Drosophila)	AK082520|Klhl7|52323|kelch-like 7 (Drosophila)
mm9_v1_chr11_-_98054219_98054219	0.0239186	CAGUGCA	AF000294|Med1|19014|mediator complex subunit 1	NM_013634|Med1|19014|mediator complex subunit 1
mm9_v1_chr2_+_140221165_140221195	0.0215129	CAGUGCA	AK134694|Macrod2|72899|MACRO domain containing 2	NM_001013802|Macrod2|72899|MACRO domain containing 2	AK013491|Macrod2|72899|MACRO domain containing 2	NM_028387|Macrod2|72899|MACRO domain containing 2	AK011824|Macrod2|72899|MACRO domain containing 2	AK165589|Macrod2|72899|MACRO domain containing 2	AK029184|Macrod2|72899|MACRO domain containing 2	AK160433|Macrod2|72899|MACRO domain containing 2	AK004072|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr11_-_4965279_4965341	0.0184394	CAGUGCA	BC031785|Gas2l1|78926|growth arrest-specific 2 like 1	AK082864|Gas2l1|78926|growth arrest-specific 2 like 1	AK019661|Gas2l1|78926|growth arrest-specific 2 like 1	AK052229|Gas2l1|78926|growth arrest-specific 2 like 1	NM_001190406|Gas2l1|78926|growth arrest-specific 2 like 1	NM_001190408|Gas2l1|78926|growth arrest-specific 2 like 1	NM_030228|Gas2l1|78926|growth arrest-specific 2 like 1	NM_144560|Gas2l1|78926|growth arrest-specific 2 like 1
mm9_v1_chr7_+_107376116_107376219	0.0169023	CAGUGCA	NM_027629|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK039189|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK040513|Pgm2l1|70974|phosphoglucomutase 2-like 1	BC076571|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr3_+_92019756_92019865	0.0163648	CAGUGCA	NM_001164787|Sprr2a2|100303744|small proline-rich protein 2A2	NM_011468|Sprr2a1|20755|small proline-rich protein 2A1	AK003391|Sprr2a1|20755|small proline-rich protein 2A1	AK007633|Sprr2a1|20755|small proline-rich protein 2A1	AK008887|Sprr2a1|20755|small proline-rich protein 2A1	AK147183|Sprr2a1|20755|small proline-rich protein 2A1	AK009238|Sprr2a1|20755|small proline-rich protein 2A1	AK168529|Sprr2a1|20755|small proline-rich protein 2A1	AY158986|Sprr2a1|20755|small proline-rich protein 2A1	AK008631|Sprr2a1|20755|small proline-rich protein 2A1	AK009790|Sprr2a1|20755|small proline-rich protein 2A1	BC010818|Sprr2a2|100303744|small proline-rich protein 2A2	AK007928|Sprr2a2|100303744|small proline-rich protein 2A2
mm9_v1_chr11_-_36757743_36757744	0.0149705	CAGUGCA	BC141361|Odz2|23964|odd Oz/ten-m homolog 2 (Drosophila)	NM_011856|Odz2|23964|odd Oz/ten-m homolog 2 (Drosophila)
mm9_v1_chr1_-_176851949_176851953	0.0143314	CAGUGCA	AB011030|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	NM_011825|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	AK142008|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr11_-_118280266_118280405	0.013908	CAGUGCA	AK006565|Cant1|76025|calcium activated nucleotidase 1	AK166384|Cant1|76025|calcium activated nucleotidase 1	AK081118|Cant1|76025|calcium activated nucleotidase 1	AK017942|Cant1|76025|calcium activated nucleotidase 1	AK049879|Cant1|76025|calcium activated nucleotidase 1	NM_001025617|Cant1|76025|calcium activated nucleotidase 1	NM_001025618|Cant1|76025|calcium activated nucleotidase 1	NM_029502|Cant1|76025|calcium activated nucleotidase 1	AK085059|Cant1|76025|calcium activated nucleotidase 1
mm9_v1_chr19_-_4190836_4191046	0.0137005	CAGUGCA	AK154444|Tbc1d10c|108995|TBC1 domain family, member 10c	BC094901|Tbc1d10c|108995|TBC1 domain family, member 10c	AK088119|Tbc1d10c|108995|TBC1 domain family, member 10c	AK131177|Tbc1d10c|108995|TBC1 domain family, member 10c	AK075803|Tbc1d10c|108995|TBC1 domain family, member 10c	AK146426|Tbc1d10c|108995|TBC1 domain family, member 10c	AK153836|Tbc1d10c|108995|TBC1 domain family, member 10c	AK040487|Tbc1d10c|108995|TBC1 domain family, member 10c	NM_178650|Tbc1d10c|108995|TBC1 domain family, member 10c
mm9_v1_chr17_-_89191315_89191329	0.0131137	CAGUGCA	M81310|Lhcgr|16867|luteinizing hormone/choriogonadotropin receptor	NM_013582|Lhcgr|16867|luteinizing hormone/choriogonadotropin receptor	AK030325|Lhcgr|16867|luteinizing hormone/choriogonadotropin receptor
mm9_v1_chr10_-_79337153_79337378	0.010349	CAGUGCA	AK220474|BC005764|216152|cDNA sequence BC005764	AF541278|BC005764|216152|cDNA sequence BC005764	NM_001170935|BC005764|216152|cDNA sequence BC005764	NM_181681|BC005764|216152|cDNA sequence BC005764
mm9_v1_chr15_+_80064503_80064578	0.0100362	CAGUGCA	AK163389|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	NM_178719|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK041184|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK038466|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK044773|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK050546|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK080375|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	BC094597|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)
mm9_v1_chr14_-_52898946_52899069	0.00817102	CAGUGCA	AK044202|Rab2b|76338|RAB2B, member RAS oncogene family	BC033312|Rab2b|76338|RAB2B, member RAS oncogene family	AK005230|Rab2b|76338|RAB2B, member RAS oncogene family	BC054719|Rab2b|76338|RAB2B, member RAS oncogene family	AK038393|Rab2b|76338|RAB2B, member RAS oncogene family	AK038576|Rab2b|76338|RAB2B, member RAS oncogene family	AK169657|Rab2b|76338|RAB2B, member RAS oncogene family	BC046334|Rab2b|76338|RAB2B, member RAS oncogene family	NM_172601|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr4_+_151648348_151648470	0.00698573	CAGUGCA	NM_178406|Gpr153|100129|G protein-coupled receptor 153
mm9_v1_chr8_+_11728104_11728202	0.00582466	CAGUGCA	NM_001113517|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AK129064|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AK139156|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)
mm9_v1_chr4_-_133843746_133843812	0.00425778	CAGUGCA	BC058514|Pdik1l|230809|PDLIM1 interacting kinase 1 like	NM_146156|Pdik1l|230809|PDLIM1 interacting kinase 1 like	AK164975|Pdik1l|230809|PDLIM1 interacting kinase 1 like
mm9_v1_chrX_+_135751704_135751704	0.00330146	CAGUGCA	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr12_-_4484059_4484074	0.00225139	CAGUGCA	NM_010881|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr14_-_122196929_122196955	0.000912851	CAGUGCA	NM_134074|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr2_+_90687308_90687523	0.000831632	CAGUGCA	AK008712|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	NM_019758|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC028929|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK016000|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK011814|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC038899|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC038916|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK162807|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AF176009|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC065145|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK164169|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK011874|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK151553|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK008487|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK161441|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK007757|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK008463|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK011785|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK075890|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK003100|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK184198|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK215565|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK217615|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)
mm9_v1_chrX_+_135744582_135744582	0.000579757	CAGUGCA	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
