mm9_v1_chr15_-_78034565_78034624	10.7083	CCAGCAU	X54613|Pvalb|19293|parvalbumin	BC027424|Pvalb|19293|parvalbumin	NM_013645|Pvalb|19293|parvalbumin	AK005371|Pvalb|19293|parvalbumin	AK013561|Pvalb|19293|parvalbumin	AK002354|Pvalb|19293|parvalbumin
mm9_v1_chr19_-_58935470_58935484	7.82515	CCAGCAU	AY196789|Hspa12a|73442|heat shock protein 12A	AK141925|Hspa12a|73442|heat shock protein 12A	NM_175199|Hspa12a|73442|heat shock protein 12A
mm9_v1_chr4_-_151235861_151235879	7.65028	CCAGCAU	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr16_-_67621054_67621188	7.45555	CCAGCAU	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr9_+_32031833_32031859	7.39806	CCAGCAU	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr13_-_105844882_105845009	6.86628	CCAGCAU	AK137417|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK036240|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	AK032138|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein	NM_029879|Rgs7bp|52882|regulator of G-protein signalling 7 binding protein
mm9_v1_chr8_-_70342105_70342226	6.57124	CCAGCAU	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr6_+_86799460_86799754	6.45706	CCAGCAU	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr11_-_70847078_70847118	6.18721	CCAGCAU	NM_134022|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene
mm9_v1_chr13_+_83643032_83643032	5.95263	CCAGCAU	NM_001170537|Mef2c|17260|myocyte enhancer factor 2C	NM_025282|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr18_+_37906739_37906841	5.9332	CCAGCAU	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr18_+_37849488_37849707	5.92604	CCAGCAU	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr18_+_37915375_37915594	5.80887	CCAGCAU	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr7_-_137410321_137410321	5.7972	CCAGCAU	NM_010207|Fgfr2|14183|fibroblast growth factor receptor 2	NM_201601|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr18_+_37844927_37845053	5.76934	CCAGCAU	BC049814|Pcdhga4|93712|protocadherin gamma subfamily A, 4	AY013798|Pcdhga4|93712|protocadherin gamma subfamily A, 4	NM_033587|Pcdhga4|93712|protocadherin gamma subfamily A, 4
mm9_v1_chr18_+_61123204_61123218	5.69533	CCAGCAU	NM_009792|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X87142|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr18_+_37833939_37833988	5.66382	CCAGCAU	BC060691|Pcdhga3|93711|protocadherin gamma subfamily A, 3	NM_033586|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr18_+_37828606_37828758	5.6209	CCAGCAU	AB093250|Pcdhga2|93710|protocadherin gamma subfamily A, 2	BC139178|Pcdhga2|93710|protocadherin gamma subfamily A, 2	AY013796|Pcdhga2|93710|protocadherin gamma subfamily A, 2	NM_033585|Pcdhga2|93710|protocadherin gamma subfamily A, 2
mm9_v1_chr18_+_37966017_37966102	5.61464	CCAGCAU	AK089310|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC059175|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	NM_033581|Pcdhgc3|93706|protocadherin gamma subfamily C, 3	BC098457|Pcdhgc3|93706|protocadherin gamma subfamily C, 3
mm9_v1_chr18_+_37890662_37890807	5.60763	CCAGCAU	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr2_-_52532100_52532129	5.60048	CCAGCAU	AK147338|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_001037099|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr2_-_52414072_52414117	5.52969	CCAGCAU	AK043850|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK079616|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	AK038633|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_146123|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr18_+_37901716_37901894	5.45518	CCAGCAU	BC054556|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	NM_033578|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	AY013808|Pcdhgb6|93703|protocadherin gamma subfamily B, 6
mm9_v1_chr18_+_37885359_37885546	5.32396	CCAGCAU	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr15_+_82105322_82105458	5.21911	CCAGCAU	AF104411|Sept3|24050|septin 3	NM_011889|Sept3|24050|septin 3	BC055738|Sept3|24050|septin 3
mm9_v1_chr11_+_68902025_68902081	5.15316	CCAGCAU	BC055105|Vamp2|22318|vesicle-associated membrane protein 2	NM_009497|Vamp2|22318|vesicle-associated membrane protein 2	BC039745|Vamp2|22318|vesicle-associated membrane protein 2	U60150|Vamp2|22318|vesicle-associated membrane protein 2
mm9_v1_chr18_+_37839910_37840111	5.12215	CCAGCAU	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr18_+_37911236_37911432	5.08976	CCAGCAU	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr18_+_37896589_37896589	5.08712	CCAGCAU	BC079567|Pcdhga9|93717|protocadherin gamma subfamily A, 9	NM_033592|Pcdhga9|93717|protocadherin gamma subfamily A, 9
mm9_v1_chr15_+_87455659_87455659	5.05038	CCAGCAU	AY325124|Fam19a5|106014|family with sequence similarity 19, member A5	BC015306|Fam19a5|106014|family with sequence similarity 19, member A5	NM_134096|Fam19a5|106014|family with sequence similarity 19, member A5
mm9_v1_chr18_+_37821598_37821598	4.8366	CCAGCAU	AY013792|Pcdhga1|93709|protocadherin gamma subfamily A, 1	NM_033584|Pcdhga1|93709|protocadherin gamma subfamily A, 1
mm9_v1_chr18_+_37925233_37925233	4.80289	CCAGCAU	BC056998|Pcdhga12|93724|protocadherin gamma subfamily A, 12	NM_033595|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr18_+_37874471_37874595	4.76845	CCAGCAU	AK034910|Pcdhga7|93715|protocadherin gamma subfamily A, 7	BC077712|Pcdhga7|93715|protocadherin gamma subfamily A, 7	NM_033590|Pcdhga7|93715|protocadherin gamma subfamily A, 7	AY013801|Pcdhga7|93715|protocadherin gamma subfamily A, 7
mm9_v1_chr18_+_37921454_37921532	4.72391	CCAGCAU	BC139099|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	BC139100|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	NM_033580|Pcdhgb8|93705|protocadherin gamma subfamily B, 8	AY013810|Pcdhgb8|93705|protocadherin gamma subfamily B, 8
mm9_v1_chr18_+_37979199_37979219	4.71952	CCAGCAU	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr9_+_31923720_31923720	4.71258	CCAGCAU	NM_001195632|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr2_-_144353133_144353142	4.6848	CCAGCAU	AK032182|6330439K17Rik|241688|RIKEN cDNA 6330439K17 gene	NM_172859|6330439K17Rik|241688|RIKEN cDNA 6330439K17 gene
mm9_v1_chr18_+_37866747_37866882	4.61528	CCAGCAU	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr2_+_35477498_35477550	4.61377	CCAGCAU	AK147593|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001114124|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr2_-_148558110_148558202	4.40948	CCAGCAU	AK078224|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	BC038362|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	AK083184|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	NM_019632|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta	BC049874|Napb|17957|N-ethylmaleimide sensitive fusion protein attachment protein beta
mm9_v1_chr7_-_82454147_82454194	4.39908	CCAGCAU	BC079568|Sv2b|64176|synaptic vesicle glycoprotein 2 b	NM_153579|Sv2b|64176|synaptic vesicle glycoprotein 2 b
mm9_v1_chr18_+_37880036_37880207	4.35694	CCAGCAU	AK083581|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	BC138701|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	AY013806|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	NM_033576|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr14_-_21613162_21613325	4.35147	CCAGCAU	AF395884|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK154764|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC025597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK078311|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	BC019162|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK081969|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK031213|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	AK054406|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039138|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_001039139|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma	NM_178597|Camk2g|12325|calcium/calmodulin-dependent protein kinase II gamma
mm9_v1_chr5_+_130090042_130090115	4.33701	CCAGCAU	BC051917|Mmp17|23948|matrix metallopeptidase 17	NM_011846|Mmp17|23948|matrix metallopeptidase 17	AB021224|Mmp17|23948|matrix metallopeptidase 17	AK143521|Mmp17|23948|matrix metallopeptidase 17	AJ010731|Mmp17|23948|matrix metallopeptidase 17
mm9_v1_chr15_-_74583382_74583477	4.32689	CCAGCAU	AF141377|Lynx1|23936|Ly6/neurotoxin 1	AK013827|Lynx1|23936|Ly6/neurotoxin 1	NM_011838|Lynx1|23936|Ly6/neurotoxin 1	AK165295|Lynx1|23936|Ly6/neurotoxin 1	AK165314|Lynx1|23936|Ly6/neurotoxin 1	AK162920|Lynx1|23936|Ly6/neurotoxin 1	AK161907|Lynx1|23936|Ly6/neurotoxin 1
mm9_v1_chr2_+_102498839_102498845	4.26645	CCAGCAU	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr4_-_154735351_154735519	4.24255	CCAGCAU	BC139761|Prkcz|18762|protein kinase C, zeta	M94632|Prkcz|18762|protein kinase C, zeta	AK165750|Prkcz|18762|protein kinase C, zeta	NM_008860|Prkcz|18762|protein kinase C, zeta
mm9_v1_chr18_+_37854011_37854154	4.20809	CCAGCAU	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr14_-_71029960_71029960	4.13961	CCAGCAU	BC016897|Epb4.9|13829|erythrocyte protein band 4.9	NM_013514|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr7_-_82453216_82453273	4.12865	CCAGCAU	AK147261|Sv2b|64176|synaptic vesicle glycoprotein 2 b	NM_001109753|Sv2b|64176|synaptic vesicle glycoprotein 2 b
mm9_v1_chr5_+_89316245_89316323	4.12669	CCAGCAU	NM_001136260|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_001197147|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	NM_018760|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	HQ204220|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	AF020195|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129863|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC148292|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4	BC129864|Slc4a4|54403|solute carrier family 4 (anion exchanger), member 4
mm9_v1_chr18_+_37974732_37974732	4.01779	CCAGCAU	BC064808|Pcdhgc4|93707|protocadherin gamma subfamily C, 4	NM_033582|Pcdhgc4|93707|protocadherin gamma subfamily C, 4
mm9_v1_chr18_-_20904585_20904945	4.01536	CCAGCAU	AK144997|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	AK138247|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	AK163956|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	AK164262|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	AK164724|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	AK137385|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	AK138610|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	AF097158|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	NM_019737|B4galt6|56386|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6
mm9_v1_chr2_+_35547418_35547513	3.97193	CCAGCAU	AY305657|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001001602|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr9_-_67407509_67407509	3.9253	CCAGCAU	NM_001081242|Tln2|70549|talin 2
mm9_v1_chr8_-_70434808_70434844	3.89968	CCAGCAU	BC052365|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK161498|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_030263|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr4_-_154719834_154719909	3.89015	CCAGCAU	AB110830|Prkcz|18762|protein kinase C, zeta	AK042562|Prkcz|18762|protein kinase C, zeta	AK049959|Prkcz|18762|protein kinase C, zeta	NM_001039079|Prkcz|18762|protein kinase C, zeta	BC072590|Prkcz|18762|protein kinase C, zeta
mm9_v1_chr2_+_177910053_177910084	3.75513	CCAGCAU	AJ632221|Phactr3|74189|phosphatase and actin regulator 3	NM_001177791|Phactr3|74189|phosphatase and actin regulator 3	AK005136|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr17_+_27792587_27792658	3.7077	CCAGCAU	BC014698|Pacsin1|23969|protein kinase C and casein kinase substrate in neurons 1	NM_011861|Pacsin1|23969|protein kinase C and casein kinase substrate in neurons 1	X85124|Pacsin1|23969|protein kinase C and casein kinase substrate in neurons 1
mm9_v1_chr2_+_177853679_177853679	3.66957	CCAGCAU	AK220554|Phactr3|74189|phosphatase and actin regulator 3	NM_001177789|Phactr3|74189|phosphatase and actin regulator 3	NM_001177790|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr2_+_177927788_177927833	3.66047	CCAGCAU	AJ632222|Phactr3|74189|phosphatase and actin regulator 3	NM_001007154|Phactr3|74189|phosphatase and actin regulator 3	AK038449|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr11_-_44283916_44284049	3.62987	CCAGCAU	AK015910|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK172546|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK043952|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK050031|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK153998|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	AK147744|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1	NM_024475|Ublcp1|79560|ubiquitin-like domain containing CTD phosphatase 1
mm9_v1_chr10_+_13686174_13686209	3.50595	CCAGCAU	AK147244|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147348|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147655|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	NM_010437|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr1_+_66221851_66221903	3.46866	CCAGCAU	AK166380|Mtap2|17756|microtubule-associated protein 2	BC052446|Mtap2|17756|microtubule-associated protein 2	NM_001039934|Mtap2|17756|microtubule-associated protein 2	NM_008632|Mtap2|17756|microtubule-associated protein 2	BC150945|Mtap2|17756|microtubule-associated protein 2
mm9_v1_chr6_-_112897259_112897274	3.43889	CCAGCAU	AK045508|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	AK051262|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	NM_080448|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr1_+_135934035_135934119	3.43677	CCAGCAU	AK054183|Fmod|14264|fibromodulin	AK080601|Fmod|14264|fibromodulin	AK082593|Fmod|14264|fibromodulin	BC052673|Fmod|14264|fibromodulin	AK032302|Fmod|14264|fibromodulin	AK053317|Fmod|14264|fibromodulin	NM_021355|Fmod|14264|fibromodulin	BC064779|Fmod|14264|fibromodulin	X94998|Fmod|14264|fibromodulin
mm9_v1_chrX_-_56387565_56387612	3.41455	CCAGCAU	BC018238|Fgf13|14168|fibroblast growth factor 13	NM_010200|Fgf13|14168|fibroblast growth factor 13
mm9_v1_chr4_+_101169252_101169283	3.30173	CCAGCAU	NM_198412|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	BC064460|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr7_+_19876447_19876478	3.28823	CCAGCAU	NM_001025364|Rtn2|20167|reticulon 2 (Z-band associated protein)	AK160500|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038539|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr6_+_54402876_54402876	3.2697	CCAGCAU	NM_001167860|Wipf3|330319|WAS/WASL interacting protein family, member 3	NM_001167861|Wipf3|330319|WAS/WASL interacting protein family, member 3
mm9_v1_chr3_-_108218411_108218411	3.24329	CCAGCAU	AB028499|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	NM_001004177|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	NM_017392|Celsr2|53883|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm9_v1_chr9_+_120213190_120213236	3.1623	CCAGCAU	AK083225|Myrip|245049|myosin VIIA and Rab interacting protein	NM_144557|Myrip|245049|myosin VIIA and Rab interacting protein	AK038988|Myrip|245049|myosin VIIA and Rab interacting protein
mm9_v1_chr18_-_15562126_15562266	3.13088	CCAGCAU	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr14_-_94287950_94288026	3.09736	CCAGCAU	NM_001081377|Pcdh9|211712|protocadherin 9	BC157952|Pcdh9|211712|protocadherin 9	BC172098|Pcdh9|211712|protocadherin 9	BC158114|Pcdh9|211712|protocadherin 9	BC158117|Pcdh9|211712|protocadherin 9
mm9_v1_chr19_-_5085471_5085483	3.09278	CCAGCAU	BC072634|Tmem151a|381199|transmembrane protein 151A	NM_001001885|Tmem151a|381199|transmembrane protein 151A
mm9_v1_chr13_+_104899869_104899979	3.07739	CCAGCAU	BC017611|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	NM_144838|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	AK082080|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm9_v1_chr1_+_196446006_196446022	3.0765	CCAGCAU	NM_008882|Plxna2|18845|plexin A2
mm9_v1_chr2_+_177876635_177876639	3.03385	CCAGCAU	AK135144|Phactr3|74189|phosphatase and actin regulator 3	NM_028806|Phactr3|74189|phosphatase and actin regulator 3
mm9_v1_chr7_+_19868009_19868016	3.01815	CCAGCAU	AK144271|Rtn2|20167|reticulon 2 (Z-band associated protein)	BC031370|Rtn2|20167|reticulon 2 (Z-band associated protein)	NM_013648|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038538|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr2_-_35056582_35056639	3.01165	CCAGCAU	AK160859|Rab14|68365|RAB14, member RAS oncogene family	NM_026697|Rab14|68365|RAB14, member RAS oncogene family
mm9_v1_chr2_+_102546576_102546605	2.95815	CCAGCAU	AB007812|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138255|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	BC138256|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077515|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_011393|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AB007811|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr6_+_49269351_49269403	2.89982	CCAGCAU	AK018135|Ccdc126|57895|coiled-coil domain containing 126	NM_175098|Ccdc126|57895|coiled-coil domain containing 126	BC117837|Ccdc126|57895|coiled-coil domain containing 126
mm9_v1_chr3_-_69402739_69402860	2.88895	CCAGCAU	AK088407|B3galnt1|26879|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1	NM_020026|B3galnt1|26879|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1
mm9_v1_chr1_+_63319842_63319842	2.8699	CCAGCAU	AK015271|Zdbf2|73884|zinc finger, DBF-type containing 2	AK132808|Zdbf2|73884|zinc finger, DBF-type containing 2	NM_028673|Zdbf2|73884|zinc finger, DBF-type containing 2
mm9_v1_chr8_-_42140113_42140147	2.84704	CCAGCAU	BC043321|Mtus1|102103|mitochondrial tumor suppressor 1	AK043214|Mtus1|102103|mitochondrial tumor suppressor 1	AY626782|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005864|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr9_-_73781373_73781373	2.83905	CCAGCAU	NM_001081153|Unc13c|208898|unc-13 homolog C (C. elegans)
mm9_v1_chr1_+_168184269_168184413	2.83198	CCAGCAU	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr6_+_115084919_115085009	2.82304	CCAGCAU	AF096867|Syn2|20965|synapsin II	NM_001111015|Syn2|20965|synapsin II	NM_013681|Syn2|20965|synapsin II	BC053427|Syn2|20965|synapsin II
mm9_v1_chr10_-_61693963_61693977	2.82251	CCAGCAU	AK012471|Tspan15|70423|tetraspanin 15	NM_197996|Tspan15|70423|tetraspanin 15	AK172169|Tspan15|70423|tetraspanin 15
mm9_v1_chr11_-_118216689_118216724	2.75514	CCAGCAU	NM_011594|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr18_+_37089837_37089938	2.75276	CCAGCAU	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chr18_+_37120093_37120209	2.74309	CCAGCAU	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr18_+_37098858_37098971	2.7179	CCAGCAU	BC030897|Pcdha2|353234|protocadherin alpha 2	NM_198117|Pcdha2|353234|protocadherin alpha 2	BC141390|Pcdha2|353234|protocadherin alpha 2	AY013760|Pcdha2|353234|protocadherin alpha 2
mm9_v1_chr18_+_37179802_37179999	2.71651	CCAGCAU	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chrX_+_131252456_131252527	2.71541	CCAGCAU	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr2_+_121115337_121115465	2.71081	CCAGCAU	AF182213|Mtap1a|17754|microtubule-associated protein 1 A	NM_032393|Mtap1a|17754|microtubule-associated protein 1 A	AK044057|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr7_-_148615247_148615354	2.69415	CCAGCAU	AF243130|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK005092|Cend1|57754|cell cycle exit and neuronal differentiation 1	BC023032|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK079045|Cend1|57754|cell cycle exit and neuronal differentiation 1	NM_021316|Cend1|57754|cell cycle exit and neuronal differentiation 1
mm9_v1_chr18_+_37127284_37127409	2.67862	CCAGCAU	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr7_+_146132386_146132432	2.66417	CCAGCAU	AK018189|Jakmip3|74004|janus kinase and microtubule interacting protein 3	AK220482|Jakmip3|74004|janus kinase and microtubule interacting protein 3	NM_028708|Jakmip3|74004|janus kinase and microtubule interacting protein 3
mm9_v1_chr17_+_87153083_87153241	2.63736	CCAGCAU	AK136911|Epas1|13819|endothelial PAS domain protein 1	NM_010137|Epas1|13819|endothelial PAS domain protein 1	D89787|Epas1|13819|endothelial PAS domain protein 1
mm9_v1_chr5_-_121459496_121459582	2.61129	CCAGCAU	BC042585|Rph3a|19894|rabphilin 3A	NM_011286|Rph3a|19894|rabphilin 3A
mm9_v1_chr6_-_126595818_126595818	2.60919	CCAGCAU	NM_010595|Kcna1|16485|potassium voltage-gated channel, shaker-related subfamily, member 1
mm9_v1_chr3_+_95985065_95985205	2.56898	CCAGCAU	AK080525|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK144166|Sv2a|64051|synaptic vesicle glycoprotein 2 a	BC046587|Sv2a|64051|synaptic vesicle glycoprotein 2 a	NM_022030|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK080502|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK028318|Sv2a|64051|synaptic vesicle glycoprotein 2 a
mm9_v1_chr6_-_12699189_12699252	2.54281	CCAGCAU	NM_001164805|Thsd7a|330267|thrombospondin, type I, domain containing 7A
mm9_v1_chr9_-_97933533_97933585	2.53434	CCAGCAU	AJ278069|Clstn2|64085|calsyntenin 2	BC063058|Clstn2|64085|calsyntenin 2	NM_022319|Clstn2|64085|calsyntenin 2
mm9_v1_chr18_+_37157533_37157533	2.51842	CCAGCAU	AY013767|Pcdha9|192161|protocadherin alpha 9	NM_138661|Pcdha9|192161|protocadherin alpha 9
mm9_v1_chr7_-_149276174_149276174	2.5017	CCAGCAU	NM_008748|Dusp8|18218|dual specificity phosphatase 8	X95518|Dusp8|18218|dual specificity phosphatase 8
mm9_v1_chr11_+_6963421_6963491	2.47037	CCAGCAU	NM_009622|Adcy1|432530|adenylate cyclase 1
mm9_v1_chr18_+_37105758_37105860	2.42853	CCAGCAU	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr15_-_103368312_103368499	2.41905	CCAGCAU	AF281676|Ppp1r1a|58200|protein phosphatase 1, regulatory (inhibitor) subunit 1A	BC025123|Ppp1r1a|58200|protein phosphatase 1, regulatory (inhibitor) subunit 1A	NM_021391|Ppp1r1a|58200|protein phosphatase 1, regulatory (inhibitor) subunit 1A
mm9_v1_chr12_+_72038843_72038862	2.40381	CCAGCAU	AK090043|Actr10|56444|ARP10 actin-related protein 10 homolog (S. cerevisiae)	NM_019785|Actr10|56444|ARP10 actin-related protein 10 homolog (S. cerevisiae)
mm9_v1_chr2_+_121121189_121121220	2.36283	CCAGCAU	NM_001173506|Mtap1a|17754|microtubule-associated protein 1 A	AF182212|Mtap1a|17754|microtubule-associated protein 1 A	BC028853|Mtap1a|17754|microtubule-associated protein 1 A	AK160546|Mtap1a|17754|microtubule-associated protein 1 A
mm9_v1_chr1_-_175297778_175297829	2.35294	CCAGCAU	AK036352|Cadm3|94332|cell adhesion molecule 3	AK053077|Cadm3|94332|cell adhesion molecule 3	AK038917|Cadm3|94332|cell adhesion molecule 3	NM_053199|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr18_+_37152024_37152120	2.32654	CCAGCAU	BC139424|Pcdha8|353235|protocadherin alpha 8	BC139426|Pcdha8|353235|protocadherin alpha 8	AY013766|Pcdha8|353235|protocadherin alpha 8	NM_201243|Pcdha8|353235|protocadherin alpha 8
mm9_v1_chr7_+_106416854_106416924	2.32456	CCAGCAU	NM_001043355|Mtap6|17760|microtubule-associated protein 6	AK154455|Mtap6|17760|microtubule-associated protein 6	Y16032|Mtap6|17760|microtubule-associated protein 6
mm9_v1_chr6_+_90412566_90412633	2.32332	CCAGCAU	AK138824|Klf15|66277|Kruppel-like factor 15	AK142618|Klf15|66277|Kruppel-like factor 15	AK009739|Klf15|66277|Kruppel-like factor 15	NM_023184|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr11_+_42233258_42233286	2.32317	CCAGCAU	AK090279|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	NM_008070|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145973|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	BC145975|Gabrb2|14401|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm9_v1_chr4_+_46052090_46052107	2.28695	CCAGCAU	NM_021883|Tmod1|21916|tropomodulin 1
mm9_v1_chr9_+_111214242_111214242	2.27436	CCAGCAU	AK079552|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1	NM_001164659|Trank1|320429|tetratricopeptide repeat and ankyrin repeat containing 1
mm9_v1_chr13_-_52626065_52626204	2.27153	CCAGCAU	AK136096|Diras2|68203|DIRAS family, GTP-binding RAS-like 2	AK136101|Diras2|68203|DIRAS family, GTP-binding RAS-like 2	NM_001024474|Diras2|68203|DIRAS family, GTP-binding RAS-like 2
mm9_v1_chr11_+_105451296_105451348	2.26513	CCAGCAU	AK019982|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	NM_181071|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	AK051973|Tanc2|77097|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm9_v1_chr2_-_118855090_118855134	2.2383	CCAGCAU	AK040670|Ccdc32|269336|coiled-coil domain containing 32	AK133813|Ccdc32|269336|coiled-coil domain containing 32	AK147152|Ccdc32|269336|coiled-coil domain containing 32	BC023926|Ccdc32|269336|coiled-coil domain containing 32	AK132604|Ccdc32|269336|coiled-coil domain containing 32	NM_199310|Ccdc32|269336|coiled-coil domain containing 32
mm9_v1_chr18_+_37133455_37133703	2.23811	CCAGCAU	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chrX_+_71002395_71002441	2.23788	CCAGCAU	AK138168|Plxnb3|140571|plexin B3	AK138631|Plxnb3|140571|plexin B3	AK140240|Plxnb3|140571|plexin B3	NM_019587|Plxnb3|140571|plexin B3
mm9_v1_chr8_-_42219037_42219129	2.19296	CCAGCAU	AK040710|Mtus1|102103|mitochondrial tumor suppressor 1	AK143781|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005863|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr11_-_105805442_105805573	2.18841	CCAGCAU	AK169711|Cyb561|13056|cytochrome b-561	AK014395|Cyb561|13056|cytochrome b-561	NM_007805|Cyb561|13056|cytochrome b-561	U16297|Cyb561|13056|cytochrome b-561	BC006732|Cyb561|13056|cytochrome b-561	AK158978|Cyb561|13056|cytochrome b-561
mm9_v1_chr18_+_37303622_37303622	2.18316	CCAGCAU	AY013769|Pcdhac2|353237|protocadherin alpha subfamily C, 2	NM_001003672|Pcdhac2|353237|protocadherin alpha subfamily C, 2
mm9_v1_chr2_+_158492468_158492468	2.17365	CCAGCAU	NM_153089|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr3_+_31048841_31049071	2.10375	CCAGCAU	NM_008770|Cldn11|18417|claudin 11	AK005088|Cldn11|18417|claudin 11	AK005171|Cldn11|18417|claudin 11	AK161698|Cldn11|18417|claudin 11	BC021659|Cldn11|18417|claudin 11	U19582|Cldn11|18417|claudin 11	AF124426|Cldn11|18417|claudin 11
mm9_v1_chr2_+_35413977_35414092	2.09126	CCAGCAU	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr9_-_95307645_95307747	2.06074	CCAGCAU	NM_018763|Chst2|54371|carbohydrate sulfotransferase 2
mm9_v1_chr7_+_53651811_53651938	2.03784	CCAGCAU	NM_008421|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147476|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	AK147682|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1	NM_001112739|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr1_+_92100572_92100639	2.02741	CCAGCAU	AK031100|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	NM_007722|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	AF000236|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	BC015254|Cxcr7|12778|chemokine (C-X-C motif) receptor 7
mm9_v1_chr2_-_121097017_121097133	2.00832	CCAGCAU	AK045851|Trp53bp1|27223|transformation related protein 53 binding protein 1	BC079906|Trp53bp1|27223|transformation related protein 53 binding protein 1	AK045077|Trp53bp1|27223|transformation related protein 53 binding protein 1	AK148123|Trp53bp1|27223|transformation related protein 53 binding protein 1	BC037378|Trp53bp1|27223|transformation related protein 53 binding protein 1	NM_013735|Trp53bp1|27223|transformation related protein 53 binding protein 1
mm9_v1_chr8_+_4493404_4493448	1.98716	CCAGCAU	NM_026058|Lass4|67260|LAG1 homolog, ceramide synthase 4	AK134887|Lass4|67260|LAG1 homolog, ceramide synthase 4
mm9_v1_chr14_-_66572577_66572643	1.98136	CCAGCAU	AK054188|Scara3|219151|scavenger receptor class A, member 3	AK048423|Scara3|219151|scavenger receptor class A, member 3	NM_172604|Scara3|219151|scavenger receptor class A, member 3
mm9_v1_chr4_+_101223198_101223198	1.9765	CCAGCAU	BC060734|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164583|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr8_+_96561097_96561129	1.97251	CCAGCAU	AK029629|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_001093757|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_177767|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK156765|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr2_+_181449669_181449860	1.95489	CCAGCAU	AF043276|Oprl1|18389|opioid receptor-like 1	U09421|Oprl1|18389|opioid receptor-like 1	AK031926|Oprl1|18389|opioid receptor-like 1	AK079529|Oprl1|18389|opioid receptor-like 1	NM_011012|Oprl1|18389|opioid receptor-like 1	AK043275|Oprl1|18389|opioid receptor-like 1	AK044178|Oprl1|18389|opioid receptor-like 1	X91813|Oprl1|18389|opioid receptor-like 1	AK142474|Oprl1|18389|opioid receptor-like 1	BC050885|Oprl1|18389|opioid receptor-like 1	U04952|Oprl1|18389|opioid receptor-like 1	BC051982|Oprl1|18389|opioid receptor-like 1
mm9_v1_chr1_+_179375951_179375951	1.95127	CCAGCAU	AF140224|Zfp238|30928|zinc finger protein 238	NM_013915|Zfp238|30928|zinc finger protein 238
mm9_v1_chr7_-_28338127_28338176	1.9509	CCAGCAU	BC068170|Pld3|18807|phospholipase D family, member 3	AF026124|Pld3|18807|phospholipase D family, member 3	NM_011116|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr2_-_118529608_118529698	1.94048	CCAGCAU	NM_001081971|Gm1337|383787|predicted gene 1337
mm9_v1_chr2_+_156246644_156246847	1.93798	CCAGCAU	AK147611|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK147272|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK165479|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	NM_001003815|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	NM_013510|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK044744|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AK154704|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	AF061283|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1	BC034751|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1
mm9_v1_chr6_+_135148004_135148077	1.92505	CCAGCAU	AK169892|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	NM_028982|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137674|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK018428|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK155128|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK039401|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC079676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene
mm9_v1_chr6_-_113145321_113145377	1.87098	CCAGCAU	AK220449|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	BC085130|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	AK046437|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4	NM_177763|Lhfpl4|269788|lipoma HMGIC fusion partner-like protein 4
mm9_v1_chr13_-_92901406_92901450	1.82873	CCAGCAU	NM_009027|Rasgrf2|19418|RAS protein-specific guanine nucleotide-releasing factor 2	U67326|Rasgrf2|19418|RAS protein-specific guanine nucleotide-releasing factor 2
mm9_v1_chr6_-_145024596_145024703	1.82629	CCAGCAU	BC053706|Bcat1|12035|branched chain aminotransferase 1, cytosolic	X17502|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK167232|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK166971|Bcat1|12035|branched chain aminotransferase 1, cytosolic	NM_007532|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK168249|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr9_+_103014374_103014418	1.79056	CCAGCAU	BC060618|Rab6b|270192|RAB6B, member RAS oncogene family	NM_173781|Rab6b|270192|RAB6B, member RAS oncogene family
mm9_v1_chr16_+_35022488_35022506	1.77983	CCAGCAU	NM_023587|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
mm9_v1_chr1_+_60466462_60466491	1.76295	CCAGCAU	NM_001198570|Abi2|329165|abl-interactor 2	NM_001198571|Abi2|329165|abl-interactor 2	NM_198127|Abi2|329165|abl-interactor 2
mm9_v1_chr14_-_56143027_56143052	1.74596	CCAGCAU	L14935|Nrl|18185|neural retina leucine zipper gene	NM_008736|Nrl|18185|neural retina leucine zipper gene	AK044275|Nrl|18185|neural retina leucine zipper gene
mm9_v1_chr18_+_61085283_61085301	1.73296	CCAGCAU	AK083245|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK163179|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	NM_177407|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	AK122410|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha	X14836|Camk2a|12322|calcium/calmodulin-dependent protein kinase II alpha
mm9_v1_chr6_-_144997311_144997331	1.72041	CCAGCAU	AK036309|Bcat1|12035|branched chain aminotransferase 1, cytosolic	NM_001024468|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr9_+_59598963_59599005	1.70962	CCAGCAU	NM_173018|Myo9a|270163|myosin IXa	AK048681|Myo9a|270163|myosin IXa
mm9_v1_chr1_-_134439500_134439516	1.70648	CCAGCAU	AK147602|Cntn2|21367|contactin 2	NM_177129|Cntn2|21367|contactin 2
mm9_v1_chrX_-_147531030_147531085	1.70069	CCAGCAU	BC037444|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC025008|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	AK044504|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC049668|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_001164578|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_175146|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
mm9_v1_chrX_+_160346948_160347157	1.69652	CCAGCAU	AK045558|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK047724|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK167690|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK053941|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK005223|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	BC046964|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	NM_026887|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit	AK043776|Ap1s2|108012|adaptor-related protein complex 1, sigma 2 subunit
mm9_v1_chr10_+_18189773_18189786	1.67847	CCAGCAU	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr2_+_48805027_48805131	1.67839	CCAGCAU	NM_029924|Mbd5|109241|methyl-CpG binding domain protein 5	AK155574|Mbd5|109241|methyl-CpG binding domain protein 5
mm9_v1_chr8_-_85966482_85966569	1.64934	CCAGCAU	NM_019708|Scoc|56367|short coiled-coil protein
mm9_v1_chr6_-_87285690_87285768	1.63908	CCAGCAU	AF378762|Antxr1|69538|anthrax toxin receptor 1	BC094544|Antxr1|69538|anthrax toxin receptor 1	AK031465|Antxr1|69538|anthrax toxin receptor 1	NM_054041|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chr1_+_194014677_194014800	1.62486	CCAGCAU	AK140193|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_001038607|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_010600|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	U04294|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC109012|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC109013|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1
mm9_v1_chr11_-_116060358_116060358	1.5616	CCAGCAU	BC056448|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	NM_015729|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr4_+_151712739_151712761	1.55845	CCAGCAU	NM_001081376|Chd5|269610|chromodomain helicase DNA binding protein 5	NM_029216|Chd5|269610|chromodomain helicase DNA binding protein 5	AK147563|Chd5|269610|chromodomain helicase DNA binding protein 5
mm9_v1_chr6_+_124948454_124948454	1.55773	CCAGCAU	BC065170|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_001145927|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr11_-_95936914_95937007	1.53436	CCAGCAU	BC003854|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008191|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK009883|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_001161419|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011432|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK008998|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK011054|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK167884|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	AK010868|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)	NM_007506|Atp5g1|11951|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
mm9_v1_chr1_+_72330942_72330988	1.53102	CCAGCAU	AK034935|Tmem169|271711|transmembrane protein 169	AK043681|Tmem169|271711|transmembrane protein 169	NM_175564|Tmem169|271711|transmembrane protein 169	AK084021|Tmem169|271711|transmembrane protein 169
mm9_v1_chr7_-_147340532_147340650	1.52518	CCAGCAU	BC056484|Sprn|212518|shadow of prion protein	NM_183147|Sprn|212518|shadow of prion protein	AK049995|Sprn|212518|shadow of prion protein
mm9_v1_chr2_+_28303460_28303460	1.51652	CCAGCAU	BC070440|Gm347|241289|predicted gene 347	NM_001005420|Gm347|241289|predicted gene 347
mm9_v1_chr2_-_79296732_79296799	1.47623	CCAGCAU	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr14_-_56143799_56143817	1.47558	CCAGCAU	AK044316|Nrl|18185|neural retina leucine zipper gene	BC031440|Nrl|18185|neural retina leucine zipper gene	NM_001136074|Nrl|18185|neural retina leucine zipper gene	AK044244|Nrl|18185|neural retina leucine zipper gene
mm9_v1_chr13_+_93381086_93381215	1.46545	CCAGCAU	AK165334|Serinc5|218442|serine incorporator 5	BC049189|Serinc5|218442|serine incorporator 5	BC062131|Serinc5|218442|serine incorporator 5	NM_172588|Serinc5|218442|serine incorporator 5	AK037699|Serinc5|218442|serine incorporator 5	AK163675|Serinc5|218442|serine incorporator 5	AB029501|Serinc5|218442|serine incorporator 5
mm9_v1_chrX_-_133403050_133403118	1.46452	CCAGCAU	BC107383|Rab9b|319642|RAB9B, member RAS oncogene family	AK034442|Rab9b|319642|RAB9B, member RAS oncogene family	NM_176971|Rab9b|319642|RAB9B, member RAS oncogene family	AK049693|Rab9b|319642|RAB9B, member RAS oncogene family
mm9_v1_chr17_-_24342446_24342565	1.4459	CCAGCAU	AK036088|Tbc1d24|224617|TBC1 domain family, member 24	AK129304|Tbc1d24|224617|TBC1 domain family, member 24	AK084693|Tbc1d24|224617|TBC1 domain family, member 24	AK086293|Tbc1d24|224617|TBC1 domain family, member 24	AK138431|Tbc1d24|224617|TBC1 domain family, member 24	AK045194|Tbc1d24|224617|TBC1 domain family, member 24	AK083833|Tbc1d24|224617|TBC1 domain family, member 24	AK049754|Tbc1d24|224617|TBC1 domain family, member 24	AK147647|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163847|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163848|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163849|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163850|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163851|Tbc1d24|224617|TBC1 domain family, member 24	NM_173186|Tbc1d24|224617|TBC1 domain family, member 24	AK172594|Ntn3|18209|netrin 3
mm9_v1_chr6_+_124948627_124948627	1.44489	CCAGCAU	AK148352|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_001145926|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr4_+_101180580_101180604	1.44306	CCAGCAU	NM_001164584|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164585|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK030374|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK122293|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr13_+_111185251_111185286	1.43346	CCAGCAU	NM_152804|Plk2|20620|polo-like kinase 2 (Drosophila)	AK133962|Plk2|20620|polo-like kinase 2 (Drosophila)	AK143452|Plk2|20620|polo-like kinase 2 (Drosophila)	AK164365|Plk2|20620|polo-like kinase 2 (Drosophila)	BC034513|Plk2|20620|polo-like kinase 2 (Drosophila)	BC035451|Plk2|20620|polo-like kinase 2 (Drosophila)	M96163|Plk2|20620|polo-like kinase 2 (Drosophila)
mm9_v1_chr15_+_99501148_99501237	1.42847	CCAGCAU	BC067025|Accn2|11419|amiloride-sensitive cation channel 2, neuronal	NM_009597|Accn2|11419|amiloride-sensitive cation channel 2, neuronal
mm9_v1_chr18_+_86882439_86882439	1.38984	CCAGCAU	AK032112|Cbln2|12405|cerebellin 2 precursor protein	NM_172633|Cbln2|12405|cerebellin 2 precursor protein
mm9_v1_chr7_+_28474358_28474458	1.38347	CCAGCAU	NM_001112731|C030039L03Rik|112415|RIKEN cDNA C030039L03 gene	AK140966|C030039L03Rik|112415|RIKEN cDNA C030039L03 gene	AK141645|C030039L03Rik|112415|RIKEN cDNA C030039L03 gene
mm9_v1_chr7_-_149558139_149558173	1.38087	CCAGCAU	BC049666|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK045822|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK163573|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	NM_177265|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK031961|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene
mm9_v1_chr8_+_91220921_91220958	1.3728	CCAGCAU	NM_001128170|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128171|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_173369|Cyld|74256|cylindromatosis (turban tumor syndrome)	NM_001128169|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK122389|Cyld|74256|cylindromatosis (turban tumor syndrome)	AK147204|Cyld|74256|cylindromatosis (turban tumor syndrome)
mm9_v1_chr6_-_121423682_121423717	1.36565	CCAGCAU	AK122446|Iqsec3|243621|IQ motif and Sec7 domain 3	AK147268|Iqsec3|243621|IQ motif and Sec7 domain 3	AK169437|Iqsec3|243621|IQ motif and Sec7 domain 3	NM_001033354|Iqsec3|243621|IQ motif and Sec7 domain 3
mm9_v1_chr16_-_38713106_38713149	1.34537	CCAGCAU	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr2_+_156301543_156301577	1.33565	CCAGCAU	NM_001006664|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1
mm9_v1_chr9_+_44925922_44925963	1.30997	CCAGCAU	NM_001014761|Scn2b|72821|sodium channel, voltage-gated, type II, beta	AB118947|Scn2b|72821|sodium channel, voltage-gated, type II, beta	BC092225|Scn2b|72821|sodium channel, voltage-gated, type II, beta
mm9_v1_chr6_-_137118238_137118241	1.30715	CCAGCAU	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr1_+_94728217_94728298	1.29809	CCAGCAU	AK154899|Gpc1|14733|glypican 1	AF185613|Gpc1|14733|glypican 1	NM_016696|Gpc1|14733|glypican 1
mm9_v1_chr12_+_112127468_112127521	1.29423	CCAGCAU	AK147592|Tecpr2|104859|tectonin beta-propeller repeat containing 2	NM_001081057|Tecpr2|104859|tectonin beta-propeller repeat containing 2	AK031736|Tecpr2|104859|tectonin beta-propeller repeat containing 2	AK129113|Tecpr2|104859|tectonin beta-propeller repeat containing 2
mm9_v1_chr12_-_88607158_88607275	1.28258	CCAGCAU	BC016646|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK082261|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK049643|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK079055|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK038165|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK046322|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK145043|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142580|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	NM_001142581|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator	AK020129|Vipar|104799|VPS33B interacting protein, apical-basolateral polarity regulator
mm9_v1_chr3_+_33699111_33699116	1.27281	CCAGCAU	AK031605|Ttc14|67120|tetratricopeptide repeat domain 14	AK134539|Ttc14|67120|tetratricopeptide repeat domain 14	NM_025978|Ttc14|67120|tetratricopeptide repeat domain 14	NM_027619|Ttc14|67120|tetratricopeptide repeat domain 14
mm9_v1_chr8_-_70498472_70498472	1.25824	CCAGCAU	AB220685|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_177698|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr17_-_81127339_81127433	1.25053	CCAGCAU	AK014711|Map4k3|225028|mitogen-activated protein kinase kinase kinase kinase 3	NM_001081357|Map4k3|225028|mitogen-activated protein kinase kinase kinase kinase 3
mm9_v1_chr1_-_38878059_38878110	1.25004	CCAGCAU	NM_001029878|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2	BC139127|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2	BC139130|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2
mm9_v1_chr15_-_79635138_79635146	1.2442	CCAGCAU	BC058962|Nptxr|73340|neuronal pentraxin receptor	BC098199|Nptxr|73340|neuronal pentraxin receptor	NM_030689|Nptxr|73340|neuronal pentraxin receptor	AK147605|Nptxr|73340|neuronal pentraxin receptor
mm9_v1_chr17_-_24336901_24336901	1.24285	CCAGCAU	AK049306|Tbc1d24|224617|TBC1 domain family, member 24	AK161054|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163852|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163853|Tbc1d24|224617|TBC1 domain family, member 24
mm9_v1_chr12_+_16901671_16901783	1.23216	CCAGCAU	NM_009072|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2
mm9_v1_chr4_+_43455122_43455148	1.22571	CCAGCAU	BC099699|Tesk1|21754|testis specific protein kinase 1	NM_011571|Tesk1|21754|testis specific protein kinase 1
mm9_v1_chr11_-_74739244_74739299	1.2244	CCAGCAU	AB232340|Srr|27364|serine racemase	AB232342|Srr|27364|serine racemase	NM_001163311|Srr|27364|serine racemase	NM_013761|Srr|27364|serine racemase
mm9_v1_chr2_-_5816381_5816442	1.22352	CCAGCAU	AK160602|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK077701|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	NM_021305|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr8_-_85982247_85982289	1.21562	CCAGCAU	AK002521|Scoc|56367|short coiled-coil protein	BC147069|Scoc|56367|short coiled-coil protein	NM_001039137|Scoc|56367|short coiled-coil protein
mm9_v1_chr5_+_33361386_33361464	1.20865	CCAGCAU	NM_011738|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm9_v1_chr9_-_64585562_64585585	1.20235	CCAGCAU	AK014268|Rab11a|53869|RAB11a, member RAS oncogene family	AK147122|Rab11a|53869|RAB11a, member RAS oncogene family	NM_017382|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr7_+_24866915_24866972	1.18362	CCAGCAU	AK144892|Zfp180|210135|zinc finger protein 180	AK083802|Zfp180|210135|zinc finger protein 180	BC085472|Zfp180|210135|zinc finger protein 180	AK145004|Zfp180|210135|zinc finger protein 180	BC066115|Zfp180|210135|zinc finger protein 180	AK141922|Zfp180|210135|zinc finger protein 180	NM_001045486|Zfp180|210135|zinc finger protein 180	AK154182|Zfp180|210135|zinc finger protein 180	BC063741|Zfp180|210135|zinc finger protein 180
mm9_v1_chr17_-_24781872_24781901	1.18056	CCAGCAU	BC065778|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK002557|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_023449|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm9_v1_chr5_-_113592211_113592370	1.1651	CCAGCAU	BC147338|2900026A02Rik|243219|RIKEN cDNA 2900026A02 gene	BC147339|2900026A02Rik|243219|RIKEN cDNA 2900026A02 gene	AK041243|2900026A02Rik|243219|RIKEN cDNA 2900026A02 gene	AK171617|2900026A02Rik|243219|RIKEN cDNA 2900026A02 gene	NM_172884|2900026A02Rik|243219|RIKEN cDNA 2900026A02 gene	AK154484|2900026A02Rik|243219|RIKEN cDNA 2900026A02 gene
mm9_v1_chr19_-_29887442_29887463	1.16454	CCAGCAU	BC056759|Ranbp6|240614|RAN binding protein 6	AK044143|Ranbp6|240614|RAN binding protein 6	BC139395|Ranbp6|240614|RAN binding protein 6	BC139396|Ranbp6|240614|RAN binding protein 6	NM_177721|Ranbp6|240614|RAN binding protein 6
mm9_v1_chr11_-_20012953_20012967	1.16239	CCAGCAU	NM_146243|Actr2|66713|ARP2 actin-related protein 2 homolog (yeast)
mm9_v1_chrX_-_7151185_7151245	1.16153	CCAGCAU	BC138137|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F	BC138138|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F	AF229644|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F	NM_138605|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm9_v1_chr10_+_98377759_98377828	1.15585	CCAGCAU	AK133920|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	NM_026482|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK170163|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	BC024831|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK170926|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr13_+_41701584_41701584	1.14737	CCAGCAU	NM_001163572|Tmem170b|621976|transmembrane protein 170B
mm9_v1_chr2_-_173102033_173102038	1.14063	CCAGCAU	AK008976|Pmepa1|65112|prostate transmembrane protein, androgen induced 1	AK136450|Pmepa1|65112|prostate transmembrane protein, androgen induced 1	NM_022995|Pmepa1|65112|prostate transmembrane protein, androgen induced 1
mm9_v1_chr13_-_32873647_32873647	1.1388	CCAGCAU	NM_001166030|Mylk4|238564|myosin light chain kinase family, member 4
mm9_v1_chr19_-_7280741_7280794	1.13267	CCAGCAU	BC054410|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK027996|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK087195|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK140070|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK145273|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	AK145970|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	BC022575|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1	NM_134150|Otub1|107260|OTU domain, ubiquitin aldehyde binding 1
mm9_v1_chr8_-_127187268_127187334	1.13147	CCAGCAU	BC058626|2310022B05Rik|69551|RIKEN cDNA 2310022B05 gene	NM_175149|2310022B05Rik|69551|RIKEN cDNA 2310022B05 gene
mm9_v1_chr18_-_35374663_35374683	1.12444	CCAGCAU	AK122278|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK036155|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK044705|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046774|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	NM_178005|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr8_-_63462080_63462110	1.08758	CCAGCAU	AK159698|Clcn3|12725|chloride channel 3	AK036501|Clcn3|12725|chloride channel 3	NM_007711|Clcn3|12725|chloride channel 3	NM_173873|Clcn3|12725|chloride channel 3	NM_173874|Clcn3|12725|chloride channel 3
mm9_v1_chrX_-_133276147_133276147	1.08553	CCAGCAU	BC075653|Morf4l2|56397|mortality factor 4 like 2	NM_019768|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr13_+_91600662_91600791	1.08021	CCAGCAU	BC002176|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024186|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024272|Ssbp2|66970|single-stranded DNA binding protein 2	AK133699|Ssbp2|66970|single-stranded DNA binding protein 2	AK051840|Ssbp2|66970|single-stranded DNA binding protein 2	AK010220|Ssbp2|66970|single-stranded DNA binding protein 2	AY037837|Ssbp2|66970|single-stranded DNA binding protein 2	AK005150|Ssbp2|66970|single-stranded DNA binding protein 2	AK013177|Ssbp2|66970|single-stranded DNA binding protein 2	AY167988|Ssbp2|66970|single-stranded DNA binding protein 2
mm9_v1_chr13_-_78338131_78338242	1.07676	CCAGCAU	BC108408|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	X74134|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	NM_010151|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1
mm9_v1_chr1_+_24685377_24685468	1.05994	CCAGCAU	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr4_+_97444312_97444317	1.05791	CCAGCAU	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr19_+_12752655_12752655	1.04606	CCAGCAU	BC065104|Olfr1443|258693|olfactory receptor 1443	NM_146698|Olfr1443|258693|olfactory receptor 1443
mm9_v1_chrX_-_133275812_133275890	1.04467	CCAGCAU	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr5_+_151062363_151062504	1.04371	CCAGCAU	NM_172887|Fry|320365|furry homolog (Drosophila)
mm9_v1_chr14_-_119498586_119498663	1.02382	CCAGCAU	AK038817|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	AK052077|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	NM_001081252|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2	AK048685|Uggt2|66435|UDP-glucose glycoprotein glucosyltransferase 2
mm9_v1_chr7_+_116154373_116154494	1.00659	CCAGCAU	AK165720|Tub|22141|tubby candidate gene	NM_021885|Tub|22141|tubby candidate gene	U52433|Tub|22141|tubby candidate gene	BC096554|Tub|22141|tubby candidate gene	U54643|Tub|22141|tubby candidate gene
mm9_v1_chr4_+_43419445_43419451	0.988703	CCAGCAU	AK132170|Rusc2|100213|RUN and SH3 domain containing 2	NM_199057|Rusc2|100213|RUN and SH3 domain containing 2	AK122263|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr2_+_145611851_145611951	0.968264	CCAGCAU	NM_028724|Rin2|74030|Ras and Rab interactor 2	BC040390|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr2_-_17652669_17652710	0.954866	CCAGCAU	BC025863|Nebl|74103|nebulette	AK036214|Nebl|74103|nebulette	AK004645|Nebl|74103|nebulette	NM_028757|Nebl|74103|nebulette
mm9_v1_chr17_+_23810567_23810574	0.953219	CCAGCAU	AK013438|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)	NM_181821|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)
mm9_v1_chrX_-_141122722_141122821	0.946933	CCAGCAU	AF060107|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5	NM_009428|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5	AK021052|Trpc5|22067|transient receptor potential cation channel, subfamily C, member 5
mm9_v1_chrX_-_35605626_35605657	0.942786	CCAGCAU	NM_172930|Fam70a|245386|family with sequence similarity 70, member A
mm9_v1_chr7_-_148379844_148379932	0.940994	CCAGCAU	BC061885|Hras1|15461|Harvey rat sarcoma virus oncogene 1	BC050837|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130443|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130444|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_008284|Hras1|15461|Harvey rat sarcoma virus oncogene 1
mm9_v1_chr7_-_4947629_4947709	0.940135	CCAGCAU	AK003337|Zfp579|68490|zinc finger protein 579	AK082494|Zfp579|68490|zinc finger protein 579	AK143550|Zfp579|68490|zinc finger protein 579	NM_026741|Zfp579|68490|zinc finger protein 579	AK148159|Zfp579|68490|zinc finger protein 579
mm9_v1_chr4_-_43038575_43038674	0.93677	CCAGCAU	AK220315|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC141058|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	AB038560|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	NM_020035|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC092394|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC036977|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	AK050819|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O
mm9_v1_chr8_-_126384108_126384108	0.927871	CCAGCAU	BC036300|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene	NM_028536|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene
mm9_v1_chr5_-_136410488_136410547	0.91898	CCAGCAU	NM_018871|Ywhag|22628|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm9_v1_chr7_+_6683288_6683655	0.914408	CCAGCAU	AF229257|Usp29|57775|ubiquitin specific peptidase 29	AK142304|Usp29|57775|ubiquitin specific peptidase 29	AK084156|Usp29|57775|ubiquitin specific peptidase 29	AF227912|Usp29|57775|ubiquitin specific peptidase 29	AK038752|Usp29|57775|ubiquitin specific peptidase 29	NM_021323|Usp29|57775|ubiquitin specific peptidase 29
mm9_v1_chr2_-_160934743_160934810	0.907309	CCAGCAU	BC145629|Chd6|71389|chromodomain helicase DNA binding protein 6	BC150806|Chd6|71389|chromodomain helicase DNA binding protein 6	AK018129|Chd6|71389|chromodomain helicase DNA binding protein 6	AK040495|Chd6|71389|chromodomain helicase DNA binding protein 6	AK142177|Chd6|71389|chromodomain helicase DNA binding protein 6	AK086807|Chd6|71389|chromodomain helicase DNA binding protein 6	AK162083|Chd6|71389|chromodomain helicase DNA binding protein 6	NM_173368|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080892|Chd6|71389|chromodomain helicase DNA binding protein 6	AK080927|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr19_-_5688877_5688907	0.906151	CCAGCAU	BC055289|Pcnxl3|104401|pecanex-like 3 (Drosophila)	BC096538|Pcnxl3|104401|pecanex-like 3 (Drosophila)	NM_144868|Pcnxl3|104401|pecanex-like 3 (Drosophila)
mm9_v1_chr2_-_5635547_5635807	0.903317	CCAGCAU	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr5_-_124778459_124778459	0.902344	CCAGCAU	NM_001081323|Mphosph9|269702|M-phase phosphoprotein 9
mm9_v1_chr4_+_43394824_43394863	0.899544	CCAGCAU	NM_001037709|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr13_+_109004589_109004634	0.896543	CCAGCAU	AK049118|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	BC005602|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	NM_029001|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK050441|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK137668|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK018616|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK037162|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)
mm9_v1_chr4_+_149656024_149656024	0.89633	CCAGCAU	NM_001085492|Rere|68703|arginine glutamic acid dipeptide (RE) repeats
mm9_v1_chr19_-_19185685_19185685	0.894869	CCAGCAU	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr8_+_107800316_107800347	0.892703	CCAGCAU	AK079536|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	BC027290|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AY459322|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	AK053846|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)	NM_030152|Nol3|78688|nucleolar protein 3 (apoptosis repressor with CARD domain)
mm9_v1_chr2_+_128891655_128891754	0.890984	CCAGCAU	NM_027192|Ttl|69737|tubulin tyrosine ligase	BC024414|Ttl|69737|tubulin tyrosine ligase	AK084377|Ttl|69737|tubulin tyrosine ligase
mm9_v1_chr2_-_102241053_102241195	0.88482	CCAGCAU	AJ278191|Trim44|80985|tripartite motif-containing 44	NM_020267|Trim44|80985|tripartite motif-containing 44
mm9_v1_chr2_+_118502976_118503018	0.879568	CCAGCAU	NM_001145854|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	AK028788|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	AK145601|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr4_-_155608927_155608999	0.873895	CCAGCAU	AY423764|Klhl17|231003|kelch-like 17 (Drosophila)	NM_198305|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr1_+_179374783_179374796	0.86703	CCAGCAU	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr1_-_166237573_166237642	0.860319	CCAGCAU	AK029787|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_001160208|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_001160209|Blzf1|66352|basic leucine zipper nuclear factor 1	NM_025505|Blzf1|66352|basic leucine zipper nuclear factor 1	AK006544|Blzf1|66352|basic leucine zipper nuclear factor 1	AK167493|Blzf1|66352|basic leucine zipper nuclear factor 1
mm9_v1_chr7_-_4796261_4796301	0.85896	CCAGCAU	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr19_-_30249899_30249920	0.857629	CCAGCAU	AK080789|Gldc|104174|glycine decarboxylase	BC017135|Gldc|104174|glycine decarboxylase	NM_138595|Gldc|104174|glycine decarboxylase	AK080937|Gldc|104174|glycine decarboxylase	AK139929|Gldc|104174|glycine decarboxylase
mm9_v1_chr4_-_153534748_153534817	0.852493	CCAGCAU	BC019544|Tprgl|67808|transformation related protein 63 regulated like	AK004777|Tprgl|67808|transformation related protein 63 regulated like	AK155413|Tprgl|67808|transformation related protein 63 regulated like	NM_026388|Tprgl|67808|transformation related protein 63 regulated like
mm9_v1_chr5_+_111847185_111847185	0.851147	CCAGCAU	NM_001081235|Mn1|433938|meningioma 1
mm9_v1_chr7_-_146374392_146374419	0.843568	CCAGCAU	NM_021302|Stk32c|57740|serine/threonine kinase 32C
mm9_v1_chr7_+_29477867_29477867	0.830255	CCAGCAU	AK053292|Fbxo27|233040|F-box protein 27	NM_207238|Fbxo27|233040|F-box protein 27
mm9_v1_chr3_+_84668066_84668066	0.828866	CCAGCAU	BC066093|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177774|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr12_+_77938392_77938461	0.82833	CCAGCAU	AK008228|Fntb|110606|farnesyltransferase, CAAX box, beta	AK089911|Fntb|110606|farnesyltransferase, CAAX box, beta	BC031417|Fntb|110606|farnesyltransferase, CAAX box, beta	NM_145927|Fntb|110606|farnesyltransferase, CAAX box, beta
mm9_v1_chr17_+_7374435_7374635	0.82248	CCAGCAU	BC055331|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	NM_011299|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	AK044173|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	BC043064|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	BC056946|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	BC051079|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	AK019881|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2	AJ131021|Rps6ka2|20112|ribosomal protein S6 kinase, polypeptide 2
mm9_v1_chr7_+_48888900_48888933	0.822007	CCAGCAU	AK082981|Zfp788|67607|zinc finger protein 788	NM_023363|Zfp788|67607|zinc finger protein 788	AK020228|Zfp788|67607|zinc finger protein 788	AK036346|Zfp788|67607|zinc finger protein 788
mm9_v1_chr17_-_35838974_35838988	0.811382	CCAGCAU	AK138698|Ddr1|12305|discoidin domain receptor family, member 1	NM_001198831|Ddr1|12305|discoidin domain receptor family, member 1
mm9_v1_chr2_-_37502738_37502804	0.807808	CCAGCAU	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr17_-_71339826_71339901	0.806337	CCAGCAU	BC099425|Myl12b|67938|myosin, light chain 12B, regulatory	BC131925|Myl12b|67938|myosin, light chain 12B, regulatory	BC131927|Myl12b|67938|myosin, light chain 12B, regulatory	BC028878|Myl12b|67938|myosin, light chain 12B, regulatory	AK002885|Myl12b|67938|myosin, light chain 12B, regulatory	AK168316|Myl12b|67938|myosin, light chain 12B, regulatory	NM_023402|Myl12b|67938|myosin, light chain 12B, regulatory	AK146115|Myl12b|67938|myosin, light chain 12B, regulatory	AK005133|Myl12b|67938|myosin, light chain 12B, regulatory	AK160123|Myl12b|67938|myosin, light chain 12B, regulatory
mm9_v1_chr7_+_28459677_28459679	0.802358	CCAGCAU	BC060708|C030039L03Rik|112415|RIKEN cDNA C030039L03 gene	NM_198417|C030039L03Rik|112415|RIKEN cDNA C030039L03 gene
mm9_v1_chr19_+_16207300_16207320	0.782451	CCAGCAU	AK147393|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide	NM_008139|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide
mm9_v1_chr2_-_22895682_22895796	0.776482	CCAGCAU	AF420251|Abi1|11308|abl-interactor 1	AK167744|Abi1|11308|abl-interactor 1	BC004657|Abi1|11308|abl-interactor 1	AK167568|Abi1|11308|abl-interactor 1	AK167328|Abi1|11308|abl-interactor 1	AK165924|Abi1|11308|abl-interactor 1	AK151363|Abi1|11308|abl-interactor 1	NM_001077190|Abi1|11308|abl-interactor 1	NM_001077192|Abi1|11308|abl-interactor 1	NM_001077193|Abi1|11308|abl-interactor 1	NM_007380|Abi1|11308|abl-interactor 1	NM_145994|Abi1|11308|abl-interactor 1
mm9_v1_chr7_+_146574969_146575035	0.769328	CCAGCAU	BC056341|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	NM_001127363|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	NM_183144|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	AK083449|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	AK171360|Inpp5a|212111|inositol polyphosphate-5-phosphatase A	AK171880|Inpp5a|212111|inositol polyphosphate-5-phosphatase A
mm9_v1_chr17_-_32925218_32925259	0.764764	CCAGCAU	AK029041|Zfp871|208292|zinc finger protein 871	NM_172458|Zfp871|208292|zinc finger protein 871
mm9_v1_chrX_-_133275693_133275798	0.75833	CCAGCAU	NM_001168225|Morf4l2|56397|mortality factor 4 like 2	AK183992|Morf4l2|56397|mortality factor 4 like 2	AK129038|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr2_-_30214724_30214844	0.757512	CCAGCAU	AF426314|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC024477|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	NM_139302|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK155248|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152409|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152502|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	EF676083|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK167762|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC028859|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2
mm9_v1_chr6_+_124946723_124946772	0.756826	CCAGCAU	AK082984|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_175696|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr14_+_30781514_30781692	0.752152	CCAGCAU	NM_019979|Selk|80795|selenoprotein K	AK008419|Selk|80795|selenoprotein K	BC038049|Selk|80795|selenoprotein K	AK003206|Selk|80795|selenoprotein K	BC096677|Selk|80795|selenoprotein K	AK007523|Selk|80795|selenoprotein K	AK006674|Selk|80795|selenoprotein K	BC096044|Selk|80795|selenoprotein K
mm9_v1_chr11_+_120459840_120459845	0.751987	CCAGCAU	NM_001038230|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr11_-_3763899_3763908	0.744095	CCAGCAU	AK049816|Osbp2|74309|oxysterol binding protein 2	NM_152818|Osbp2|74309|oxysterol binding protein 2
mm9_v1_chr2_+_118489312_118489451	0.733128	CCAGCAU	BC079572|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	NM_001033254|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6	BC150754|Pak6|214230|p21 protein (Cdc42/Rac)-activated kinase 6
mm9_v1_chr1_-_153937364_153937449	0.727537	CCAGCAU	AK144357|LOC545371|545371|hypothetical protein LOC545371	NM_197990|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr2_+_163820920_163821078	0.72576	CCAGCAU	AK150414|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK151294|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK004872|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK011389|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	NM_018753|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AF058797|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK083367|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK158932|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK204033|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC132121|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC138512|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr1_+_91351373_91351428	0.724551	CCAGCAU	AK147503|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037136|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_178119|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK046523|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK129289|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr17_-_23330163_23330200	0.720286	CCAGCAU	BC061205|Zfp40|22700|zinc finger protein 40	AK164585|Zfp40|22700|zinc finger protein 40	BC065097|Zfp40|22700|zinc finger protein 40	NM_009555|Zfp40|22700|zinc finger protein 40	AK049894|Zfp40|22700|zinc finger protein 40
mm9_v1_chr1_+_174056868_174056950	0.71817	CCAGCAU	AK029368|Pex19|19298|peroxisomal biogenesis factor 19	NM_001159525|Pex19|19298|peroxisomal biogenesis factor 19	NM_023041|Pex19|19298|peroxisomal biogenesis factor 19	AK028449|Pex19|19298|peroxisomal biogenesis factor 19	AK075576|Pex19|19298|peroxisomal biogenesis factor 19	AK170175|Pex19|19298|peroxisomal biogenesis factor 19	AK012785|Pex19|19298|peroxisomal biogenesis factor 19	BC019767|Pex19|19298|peroxisomal biogenesis factor 19	Y09046|Pex19|19298|peroxisomal biogenesis factor 19	CT010305|Pex19|19298|peroxisomal biogenesis factor 19	BC012517|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr18_+_37249789_37249789	0.70522	CCAGCAU	AY013768|Pcdhac1|353236|protocadherin alpha subfamily C, 1	NM_001003671|Pcdhac1|353236|protocadherin alpha subfamily C, 1
mm9_v1_chr5_+_121098830_121098830	0.689367	CCAGCAU	BC005418|Rasal1|19415|RAS protein activator like 1 (GAP1 like)	NM_013832|Rasal1|19415|RAS protein activator like 1 (GAP1 like)
mm9_v1_chr6_-_137119016_137119017	0.688488	CCAGCAU	NM_181988|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	BC026463|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr7_-_36370556_36370600	0.687339	CCAGCAU	BC118006|Rgs9bp|243923|regulator of G-protein signalling 9 binding protein	AY229888|Rgs9bp|243923|regulator of G-protein signalling 9 binding protein	AK044285|Rgs9bp|243923|regulator of G-protein signalling 9 binding protein	NM_145840|Rgs9bp|243923|regulator of G-protein signalling 9 binding protein
mm9_v1_chr2_+_59450080_59450110	0.686843	CCAGCAU	NM_198294|Tanc1|66860|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm9_v1_chr17_+_26551909_26551909	0.68452	CCAGCAU	DQ839448|Neurl1b|240055|neuralized homolog 1b (Drosophila)	GQ414760|Neurl1b|240055|neuralized homolog 1b (Drosophila)	NM_001081656|Neurl1b|240055|neuralized homolog 1b (Drosophila)
mm9_v1_chr3_+_84619399_84619498	0.679586	CCAGCAU	BC085184|Fbxw7|50754|F-box and WD-40 domain protein 7	BC060620|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177773|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr17_-_35837432_35837546	0.678481	CCAGCAU	AF026259|Ddr1|12305|discoidin domain receptor family, member 1	BC006836|Ddr1|12305|discoidin domain receptor family, member 1	NM_001198833|Ddr1|12305|discoidin domain receptor family, member 1
mm9_v1_chr2_-_125608472_125608605	0.672073	CCAGCAU	BC095939|Secisbp2l|70354|SECIS binding protein 2-like	AK145135|Secisbp2l|70354|SECIS binding protein 2-like	AK169713|Secisbp2l|70354|SECIS binding protein 2-like	BC141056|Secisbp2l|70354|SECIS binding protein 2-like	AK049924|Secisbp2l|70354|SECIS binding protein 2-like	NM_177608|Secisbp2l|70354|SECIS binding protein 2-like
mm9_v1_chrX_+_16196823_16196987	0.67191	CCAGCAU	AK146612|Maoa|17161|monoamine oxidase A	NM_173740|Maoa|17161|monoamine oxidase A	BC029100|Maoa|17161|monoamine oxidase A	AK004337|Maoa|17161|monoamine oxidase A	AK155052|Maoa|17161|monoamine oxidase A	AK164457|Maoa|17161|monoamine oxidase A
mm9_v1_chr11_-_87800799_87801034	0.669556	CCAGCAU	AK028319|Dynll2|68097|dynein light chain LC8-type 2	BC011289|Dynll2|68097|dynein light chain LC8-type 2	BC058797|Dynll2|68097|dynein light chain LC8-type 2	BC040822|Dynll2|68097|dynein light chain LC8-type 2	AK011284|Dynll2|68097|dynein light chain LC8-type 2	AK160114|Dynll2|68097|dynein light chain LC8-type 2	AK049645|Dynll2|68097|dynein light chain LC8-type 2	AK078434|Dynll2|68097|dynein light chain LC8-type 2	AK169212|Dynll2|68097|dynein light chain LC8-type 2	NM_026556|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr3_-_122322556_122322614	0.669424	CCAGCAU	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr11_-_87800086_87800086	0.666083	CCAGCAU	NM_001168472|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr11_-_87811778_87811799	0.660549	CCAGCAU	BC049621|Dynll2|68097|dynein light chain LC8-type 2	AK006876|Dynll2|68097|dynein light chain LC8-type 2	NM_001168471|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr5_+_104888468_104888623	0.660186	CCAGCAU	BC053058|Pkd2|18764|polycystic kidney disease 2	BC062969|Pkd2|18764|polycystic kidney disease 2	NM_008861|Pkd2|18764|polycystic kidney disease 2	FJ609779|Pkd2|18764|polycystic kidney disease 2	Y13278|Pkd2|18764|polycystic kidney disease 2	AK053502|Pkd2|18764|polycystic kidney disease 2	AF014010|Pkd2|18764|polycystic kidney disease 2	AK164673|Pkd2|18764|polycystic kidney disease 2	AK128961|Pkd2|18764|polycystic kidney disease 2
mm9_v1_chr11_+_32542845_32542890	0.653478	CCAGCAU	AK166226|Fbxw11|103583|F-box and WD-40 domain protein 11	BC034261|Fbxw11|103583|F-box and WD-40 domain protein 11	NM_134015|Fbxw11|103583|F-box and WD-40 domain protein 11	AK178514|Fbxw11|103583|F-box and WD-40 domain protein 11	AK179454|Fbxw11|103583|F-box and WD-40 domain protein 11	AY038079|Fbxw11|103583|F-box and WD-40 domain protein 11
mm9_v1_chr2_+_31101302_31101442	0.653317	CCAGCAU	BC059825|Ncs1|14299|neuronal calcium sensor 1	NM_019681|Ncs1|14299|neuronal calcium sensor 1
mm9_v1_chr3_+_107989221_107989318	0.646154	CCAGCAU	AK173118|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_001004293|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_146137|Amigo1|229715|adhesion molecule with Ig like domain 1	BC022907|Amigo1|229715|adhesion molecule with Ig like domain 1	AK035960|Amigo1|229715|adhesion molecule with Ig like domain 1	BC010598|Amigo1|229715|adhesion molecule with Ig like domain 1
mm9_v1_chr2_-_121632749_121632811	0.645633	CCAGCAU	AK054484|Frmd5|228564|FERM domain containing 5	BC062889|Frmd5|228564|FERM domain containing 5	AK146383|Frmd5|228564|FERM domain containing 5	AK048865|Frmd5|228564|FERM domain containing 5	NM_172673|Frmd5|228564|FERM domain containing 5
mm9_v1_chr13_-_54666552_54666754	0.634072	CCAGCAU	AK217762|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK173126|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC039775|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK014792|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK028697|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK016176|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK167616|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC054417|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC043040|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK004845|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK159945|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK145025|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK169399|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	BC033445|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	NM_133797|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene
mm9_v1_chr2_+_179177132_179177182	0.632473	CCAGCAU	BC047991|Cdh4|12561|cadherin 4	NM_009867|Cdh4|12561|cadherin 4
mm9_v1_chr19_+_55390770_55390846	0.631326	CCAGCAU	AK135463|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK014541|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK148281|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK030538|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AF035209|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	BC089321|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AF035823|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK028646|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	NM_016862|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	BC012211|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	AK035895|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
mm9_v1_chrX_+_130939318_130939458	0.627535	CCAGCAU	AK038488|Drp2|13497|dystrophin related protein 2	NM_010078|Drp2|13497|dystrophin related protein 2	AK081426|Drp2|13497|dystrophin related protein 2	AK034383|Drp2|13497|dystrophin related protein 2	BC125345|Drp2|13497|dystrophin related protein 2	BC125347|Drp2|13497|dystrophin related protein 2
mm9_v1_chr12_+_37108036_37108345	0.626466	CCAGCAU	AK045940|Ispd|75847|isoprenoid synthase domain containing	BC086665|Ispd|75847|isoprenoid synthase domain containing	NM_178629|Ispd|75847|isoprenoid synthase domain containing	BC096030|Ispd|75847|isoprenoid synthase domain containing	AK039004|Ispd|75847|isoprenoid synthase domain containing	BC050993|Ispd|75847|isoprenoid synthase domain containing	BC118038|Ispd|75847|isoprenoid synthase domain containing	AK051322|Ispd|75847|isoprenoid synthase domain containing
mm9_v1_chr8_+_113245378_113245384	0.619229	CCAGCAU	BC060632|Mtss1l|244654|metastasis suppressor 1-like	NM_198625|Mtss1l|244654|metastasis suppressor 1-like
mm9_v1_chr19_+_53404935_53404935	0.609068	CCAGCAU	L38821|Mxi1|17859|Max interacting protein 1	NM_001008543|Mxi1|17859|Max interacting protein 1
mm9_v1_chr11_+_53333270_53333474	0.600942	CCAGCAU	BC059248|Sept8|20362|septin 8	NM_033144|Sept8|20362|septin 8	AB093215|Sept8|20362|septin 8	AK144178|Sept8|20362|septin 8	BC049819|Sept8|20362|septin 8	BC037707|Sept8|20362|septin 8
mm9_v1_chr6_+_145882641_145882808	0.596262	CCAGCAU	AK162864|Sspn|16651|sarcospan	AK163041|Sspn|16651|sarcospan	AK164430|Sspn|16651|sarcospan	BC021484|Sspn|16651|sarcospan	NM_010656|Sspn|16651|sarcospan	U02487|Sspn|16651|sarcospan	AK148179|Sspn|16651|sarcospan	AK164529|Sspn|16651|sarcospan
mm9_v1_chr2_+_69561103_69561149	0.595645	CCAGCAU	AK135178|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC150694|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK134121|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	NM_001081086|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC027420|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr7_-_146399089_146399205	0.593936	CCAGCAU	NM_001162540|Stk32c|57740|serine/threonine kinase 32C
mm9_v1_chr9_-_53475610_53475616	0.591584	CCAGCAU	AK031955|Cul5|75717|cullin 5	NM_001161618|Cul5|75717|cullin 5	NM_027807|Cul5|75717|cullin 5
mm9_v1_chr4_+_115823089_115823207	0.588522	CCAGCAU	NM_026651|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	NM_029786|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AK002638|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AB053220|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	BC011201|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	AK183969|Pomgnt1|68273|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase
mm9_v1_chr12_+_86814822_86814862	0.586083	CCAGCAU	AK154418|Fos|14281|FBJ osteosarcoma oncogene	BC029814|Fos|14281|FBJ osteosarcoma oncogene	NM_010234|Fos|14281|FBJ osteosarcoma oncogene
mm9_v1_chr14_+_12386043_12386066	0.585207	CCAGCAU	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr5_-_92512683_92512782	0.574715	CCAGCAU	AF145285|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	U65313|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK151965|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK152792|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK172256|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	BC048176|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK145697|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK076117|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK167186|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080795|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_011816|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr16_+_3884618_3884768	0.571595	CCAGCAU	NM_029090|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK039910|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	BC004837|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK088736|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK004750|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)
mm9_v1_chr13_+_113450958_113450993	0.565576	CCAGCAU	AK020109|Slc38a9|268706|solute carrier family 38, member 9	BC052361|Slc38a9|268706|solute carrier family 38, member 9	NM_178746|Slc38a9|268706|solute carrier family 38, member 9	AK044735|Slc38a9|268706|solute carrier family 38, member 9	AK043402|Slc38a9|268706|solute carrier family 38, member 9	AK034958|Slc38a9|268706|solute carrier family 38, member 9	AK039821|Slc38a9|268706|solute carrier family 38, member 9
mm9_v1_chr2_-_118199046_118199154	0.562986	CCAGCAU	BC052037|Gpr176|381413|G protein-coupled receptor 176	NM_201367|Gpr176|381413|G protein-coupled receptor 176
mm9_v1_chr6_+_65621583_65621630	0.558847	CCAGCAU	AK049802|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	AK029210|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	NM_172399|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	BC047154|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene
mm9_v1_chr1_+_155587480_155587527	0.555941	CCAGCAU	AK079543|Rgs16|19734|regulator of G-protein signaling 16	NM_011267|Rgs16|19734|regulator of G-protein signaling 16	AK154324|Rgs16|19734|regulator of G-protein signaling 16	U94828|Rgs16|19734|regulator of G-protein signaling 16	U67189|Rgs16|19734|regulator of G-protein signaling 16	BC049968|Rgs16|19734|regulator of G-protein signaling 16	BC010980|Rgs16|19734|regulator of G-protein signaling 16	BC055459|Rgs16|19734|regulator of G-protein signaling 16	U72881|Rgs16|19734|regulator of G-protein signaling 16
mm9_v1_chr17_+_43153490_43153503	0.555453	CCAGCAU	AK043823|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21	NM_178589|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21
mm9_v1_chr11_-_71949346_71949391	0.544097	CCAGCAU	AK147444|Pitpnm3|327958|PITPNM family member 3	NM_001024927|Pitpnm3|327958|PITPNM family member 3	NM_001081641|Pitpnm3|327958|PITPNM family member 3
mm9_v1_chr15_+_81296745_81296851	0.543751	CCAGCAU	NM_019712|Rbx1|56438|ring-box 1	AK004114|Rbx1|56438|ring-box 1	AK005127|Rbx1|56438|ring-box 1	AK003159|Rbx1|56438|ring-box 1	AF140599|Rbx1|56438|ring-box 1	AK152012|Rbx1|56438|ring-box 1	AK159571|Rbx1|56438|ring-box 1	BC027396|Rbx1|56438|ring-box 1	BC051473|Rbx1|56438|ring-box 1	BC056992|Rbx1|56438|ring-box 1	AK182752|Rbx1|56438|ring-box 1	AK183716|Rbx1|56438|ring-box 1
mm9_v1_chr11_+_67399999_67400271	0.527782	CCAGCAU	AK031455|Gas7|14457|growth arrest specific 7	NM_001109657|Gas7|14457|growth arrest specific 7	AK154463|Gas7|14457|growth arrest specific 7	AK017394|Gas7|14457|growth arrest specific 7
mm9_v1_chr8_-_4217275_4217311	0.523892	CCAGCAU	BC068157|BC068157|73072|cDNA sequence BC068157	NM_207203|BC068157|73072|cDNA sequence BC068157
mm9_v1_chr2_-_73730605_73730700	0.514551	CCAGCAU	AK139844|Atf2|11909|activating transcription factor 2	AK146839|Atf2|11909|activating transcription factor 2	AK139515|Atf2|11909|activating transcription factor 2	BC079883|Atf2|11909|activating transcription factor 2	BC085137|Atf2|11909|activating transcription factor 2	BC082596|Atf2|11909|activating transcription factor 2	AK035438|Atf2|11909|activating transcription factor 2	AK140855|Atf2|11909|activating transcription factor 2	AK144977|Atf2|11909|activating transcription factor 2	AK051591|Atf2|11909|activating transcription factor 2	AK087424|Atf2|11909|activating transcription factor 2	NM_001025093|Atf2|11909|activating transcription factor 2	NM_009715|Atf2|11909|activating transcription factor 2	AK145887|Atf2|11909|activating transcription factor 2
mm9_v1_chr14_+_58417025_58417046	0.504293	CCAGCAU	NM_009119|Sap18|20220|Sin3-associated polypeptide 18
mm9_v1_chr3_-_108830522_108830608	0.504011	CCAGCAU	NM_001163567|Fam102b|329739|family with sequence similarity 102, member B
mm9_v1_chr6_+_140372619_140372642	0.502604	CCAGCAU	NM_144920|Plekha5|109135|pleckstrin homology domain containing, family A member 5
mm9_v1_chr10_-_112365976_112366087	0.494669	CCAGCAU	AK014824|Atxn7l3b|382423|ataxin 7-like 3B	BC058561|Atxn7l3b|382423|ataxin 7-like 3B	BC047210|Atxn7l3b|382423|ataxin 7-like 3B	BC079579|Atxn7l3b|382423|ataxin 7-like 3B	BC094390|Atxn7l3b|382423|ataxin 7-like 3B	BC030168|Atxn7l3b|382423|ataxin 7-like 3B	AK003631|Atxn7l3b|382423|ataxin 7-like 3B	AK150316|Atxn7l3b|382423|ataxin 7-like 3B	AK135540|Atxn7l3b|382423|ataxin 7-like 3B	AK011696|Atxn7l3b|382423|ataxin 7-like 3B	AK009409|Atxn7l3b|382423|ataxin 7-like 3B	NM_001033474|Atxn7l3b|382423|ataxin 7-like 3B
mm9_v1_chr4_+_86520317_86520392	0.486836	CCAGCAU	BC059819|Acer2|230379|alkaline ceramidase 2	NM_139306|Acer2|230379|alkaline ceramidase 2	AK085306|Acer2|230379|alkaline ceramidase 2	AF282864|Acer2|230379|alkaline ceramidase 2	AY312515|Acer2|230379|alkaline ceramidase 2
mm9_v1_chr18_-_56732585_56732592	0.486708	CCAGCAU	NM_001127338|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr4_+_130348406_130348575	0.48173	CCAGCAU	AK129153|Sdc3|20970|syndecan 3	NM_011520|Sdc3|20970|syndecan 3	AK155127|Sdc3|20970|syndecan 3	BC054795|Sdc3|20970|syndecan 3	BC062093|Sdc3|20970|syndecan 3	U52826|Sdc3|20970|syndecan 3
mm9_v1_chr9_+_107302196_107302210	0.473186	CCAGCAU	BC056389|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174047|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174048|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174049|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_001174050|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2	NM_020263|Cacna2d2|56808|calcium channel, voltage-dependent, alpha 2/delta subunit 2
mm9_v1_chr7_-_137663020_137663074	0.471549	CCAGCAU	BC050948|Ate1|11907|arginyltransferase 1	NM_001136054|Ate1|11907|arginyltransferase 1	AK167591|Ate1|11907|arginyltransferase 1	BC042601|Ate1|11907|arginyltransferase 1	NM_013799|Ate1|11907|arginyltransferase 1	AK148442|Ate1|11907|arginyltransferase 1
mm9_v1_chr7_+_98239230_98239295	0.46505	CCAGCAU	NM_011807|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr9_+_94570310_94570389	0.464449	CCAGCAU	NM_177909|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK037058|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC153825|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC099942|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK172687|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK156494|Slc9a9|331004|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm9_v1_chr11_-_90499370_90499421	0.459507	CCAGCAU	BC032881|Stxbp4|20913|syntaxin binding protein 4	AK012293|Stxbp4|20913|syntaxin binding protein 4	AK032998|Stxbp4|20913|syntaxin binding protein 4	AK049001|Stxbp4|20913|syntaxin binding protein 4	NM_011505|Stxbp4|20913|syntaxin binding protein 4
mm9_v1_chr2_+_158492854_158492905	0.458816	CCAGCAU	AK044453|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_001159662|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC054764|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC057542|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AF423761|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AK042123|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr16_-_16359122_16359124	0.456132	CCAGCAU	NM_001025947|Dnm1l|74006|dynamin 1-like	NM_152816|Dnm1l|74006|dynamin 1-like
mm9_v1_chr4_+_135841981_135841996	0.451421	CCAGCAU	AK053652|Zfp46|22704|zinc finger protein 46	NM_009557|Zfp46|22704|zinc finger protein 46	AK173240|Zfp46|22704|zinc finger protein 46
mm9_v1_chr14_-_26588341_26588548	0.444505	CCAGCAU	NM_001101433|Zcchc24|71918|zinc finger, CCHC domain containing 24	BC147263|Zcchc24|71918|zinc finger, CCHC domain containing 24	BC147264|Zcchc24|71918|zinc finger, CCHC domain containing 24
mm9_v1_chr19_-_19075535_19075606	0.444487	CCAGCAU	DQ779924|Rorb|225998|RAR-related orphan receptor beta	BC024768|Rorb|225998|RAR-related orphan receptor beta	AK044421|Rorb|225998|RAR-related orphan receptor beta	BC024842|Rorb|225998|RAR-related orphan receptor beta	NM_146095|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr2_-_58419236_58419238	0.440058	CCAGCAU	AK150014|Acvr1|11477|activin A receptor, type 1	AK150075|Acvr1|11477|activin A receptor, type 1	NM_001110204|Acvr1|11477|activin A receptor, type 1	NM_001110205|Acvr1|11477|activin A receptor, type 1	NM_007394|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr16_+_14906698_14906846	0.439431	CCAGCAU	AK042748|Efcab1|66793|EF hand calcium binding domain 1	AK015866|Efcab1|66793|EF hand calcium binding domain 1	AK030381|Efcab1|66793|EF hand calcium binding domain 1	AK038735|Efcab1|66793|EF hand calcium binding domain 1	AK077722|Efcab1|66793|EF hand calcium binding domain 1	AK017267|Efcab1|66793|EF hand calcium binding domain 1	NM_025769|Efcab1|66793|EF hand calcium binding domain 1	AK015426|Efcab1|66793|EF hand calcium binding domain 1	AK043519|Efcab1|66793|EF hand calcium binding domain 1	BC085167|Efcab1|66793|EF hand calcium binding domain 1
mm9_v1_chr12_-_112615921_112615933	0.436057	CCAGCAU	NM_183016|Cdc42bpb|217866|CDC42 binding protein kinase beta
mm9_v1_chr9_+_64949242_64949341	0.431283	CCAGCAU	AB052620|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AB052621|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AK082162|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	NM_020043|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AK079073|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AF176694|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	AK143256|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	BC126879|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4	BC126880|Igdcc4|56741|immunoglobulin superfamily, DCC subclass, member 4
mm9_v1_chr7_+_29478162_29478199	0.430558	CCAGCAU	AK158463|Fbxo27|233040|F-box protein 27	NM_001163702|Fbxo27|233040|F-box protein 27	AK140275|Fbxo27|233040|F-box protein 27	BC075656|Fbxo27|233040|F-box protein 27
mm9_v1_chr9_+_121669121_121669172	0.430278	CCAGCAU	NM_001166644|Zfp651|270210|zinc finger protein 651
mm9_v1_chr6_-_142912908_142912971	0.425909	CCAGCAU	AK046188|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC024821|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	NM_011374|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm9_v1_chr6_+_91828040_91828112	0.425179	CCAGCAU	NM_172730|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	BC051147|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK170727|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK156259|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK081505|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK039818|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK155581|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK170492|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	BC038871|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK051852|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene
mm9_v1_chr4_+_136025675_136025745	0.424984	CCAGCAU	AK139583|Luzp1|269593|leucine zipper protein 1	NM_024452|Luzp1|269593|leucine zipper protein 1	AK012514|Luzp1|269593|leucine zipper protein 1	BC026746|Luzp1|269593|leucine zipper protein 1
mm9_v1_chr17_-_26078825_26078928	0.422193	CCAGCAU	AK155173|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK016852|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK137390|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK033349|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK170431|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AB008895|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	BC014287|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	NM_011822|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK163680|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q	AK169284|Pigq|14755|phosphatidylinositol glycan anchor biosynthesis, class Q
mm9_v1_chr16_+_57121795_57121895	0.42149	CCAGCAU	AK145458|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC057096|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK012084|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK083586|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK150429|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	NM_138599|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK161720|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139420|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	BC139421|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK169809|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK122356|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chr15_-_98507886_98507905	0.420559	CCAGCAU	AK161870|Rnd1|223881|Rho family GTPase 1	BC048531|Rnd1|223881|Rho family GTPase 1	AK039992|Rnd1|223881|Rho family GTPase 1	AK043639|Rnd1|223881|Rho family GTPase 1	NM_172612|Rnd1|223881|Rho family GTPase 1
mm9_v1_chr9_+_121628258_121628322	0.419056	CCAGCAU	AK163916|Nktr|18087|natural killer tumor recognition sequence	L04289|Nktr|18087|natural killer tumor recognition sequence	NM_010918|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr18_-_53904193_53904270	0.412729	CCAGCAU	AK044952|Cep120|225523|centrosomal protein 120	BC053439|Cep120|225523|centrosomal protein 120	NM_178686|Cep120|225523|centrosomal protein 120	AK089236|Cep120|225523|centrosomal protein 120	AK089242|Cep120|225523|centrosomal protein 120	AK044808|Cep120|225523|centrosomal protein 120	AK079319|Cep120|225523|centrosomal protein 120	AK047594|Cep120|225523|centrosomal protein 120	AK038916|Cep120|225523|centrosomal protein 120
mm9_v1_chr2_+_163484110_163484121	0.411516	CCAGCAU	AK135505|Pkig|18769|protein kinase inhibitor, gamma	NM_001039390|Pkig|18769|protein kinase inhibitor, gamma	NM_001039391|Pkig|18769|protein kinase inhibitor, gamma	NM_001164055|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr2_+_163484132_163484240	0.411323	CCAGCAU	AK164716|Pkig|18769|protein kinase inhibitor, gamma	AK168614|Pkig|18769|protein kinase inhibitor, gamma	NM_001164053|Pkig|18769|protein kinase inhibitor, gamma	AK184424|Pkig|18769|protein kinase inhibitor, gamma	AK186035|Pkig|18769|protein kinase inhibitor, gamma	AK186927|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr5_+_124423632_124423689	0.407113	CCAGCAU	NM_145070|Hip1r|29816|huntingtin interacting protein 1 related	BC065101|Hip1r|29816|huntingtin interacting protein 1 related	AK014542|Hip1r|29816|huntingtin interacting protein 1 related	AK129182|Hip1r|29816|huntingtin interacting protein 1 related
mm9_v1_chr7_+_129276547_129276617	0.40457	CCAGCAU	AK076738|Dctn5|59288|dynactin 5	NM_021608|Dctn5|59288|dynactin 5	BC005671|Dctn5|59288|dynactin 5	AK010238|Dctn5|59288|dynactin 5	AK168983|Dctn5|59288|dynactin 5	AK076100|Dctn5|59288|dynactin 5	AK151193|Dctn5|59288|dynactin 5	AK151876|Dctn5|59288|dynactin 5	BC010834|Dctn5|59288|dynactin 5	BC092273|Dctn5|59288|dynactin 5	AK146123|Dctn5|59288|dynactin 5	AK145958|Dctn5|59288|dynactin 5	AF190795|Dctn5|59288|dynactin 5	AK051957|Dctn5|59288|dynactin 5
mm9_v1_chr10_-_60846055_60846288	0.391001	CCAGCAU	X99384|X99384|27355|cDNA sequence X99384	BC099531|X99384|27355|cDNA sequence X99384	BC052850|X99384|27355|cDNA sequence X99384	AK088577|X99384|27355|cDNA sequence X99384	AK146489|X99384|27355|cDNA sequence X99384	NM_013753|X99384|27355|cDNA sequence X99384
mm9_v1_chr11_+_102977638_102977680	0.387669	CCAGCAU	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr11_+_120459734_120459836	0.38402	CCAGCAU	NM_025389|Anapc11|66156|anaphase promoting complex subunit 11	AK158224|Anapc11|66156|anaphase promoting complex subunit 11	AK003612|Anapc11|66156|anaphase promoting complex subunit 11	AK045408|Anapc11|66156|anaphase promoting complex subunit 11	AK003244|Anapc11|66156|anaphase promoting complex subunit 11	AK136358|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr4_+_151470827_151470883	0.382048	CCAGCAU	AY605057|Plekhg5|269608|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	AY605058|Plekhg5|269608|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	NM_001004156|Plekhg5|269608|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm9_v1_chr4_-_141179720_141179764	0.367686	CCAGCAU	BC089627|Slc25a34|384071|solute carrier family 25, member 34	AK085913|Slc25a34|384071|solute carrier family 25, member 34	AK142924|Slc25a34|384071|solute carrier family 25, member 34	NM_001013780|Slc25a34|384071|solute carrier family 25, member 34
mm9_v1_chr18_+_37170365_37170627	0.366364	CCAGCAU	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr14_+_63741286_63741338	0.36419	CCAGCAU	AK083393|Ctsb|13030|cathepsin B	NM_007798|Ctsb|13030|cathepsin B	S69034|Ctsb|13030|cathepsin B	BC006656|Ctsb|13030|cathepsin B	AK159992|Ctsb|13030|cathepsin B	AK167361|Ctsb|13030|cathepsin B	AK170959|Ctsb|13030|cathepsin B
mm9_v1_chr17_-_35840931_35841083	0.359799	CCAGCAU	L57509|Ddr1|12305|discoidin domain receptor family, member 1	AK143088|Ddr1|12305|discoidin domain receptor family, member 1	AK031442|Ddr1|12305|discoidin domain receptor family, member 1	NM_007584|Ddr1|12305|discoidin domain receptor family, member 1	NM_172962|Ddr1|12305|discoidin domain receptor family, member 1
mm9_v1_chr9_-_90009416_90009657	0.356348	CCAGCAU	AK167079|Morf4l1|21761|mortality factor 4 like 1	AK164251|Morf4l1|21761|mortality factor 4 like 1	AK010528|Morf4l1|21761|mortality factor 4 like 1	AK011441|Morf4l1|21761|mortality factor 4 like 1	AK182816|Morf4l1|21761|mortality factor 4 like 1	AK218718|Morf4l1|21761|mortality factor 4 like 1	BC083094|Morf4l1|21761|mortality factor 4 like 1	AK152119|Morf4l1|21761|mortality factor 4 like 1	AK168585|Morf4l1|21761|mortality factor 4 like 1	AK168608|Morf4l1|21761|mortality factor 4 like 1	AK150925|Morf4l1|21761|mortality factor 4 like 1	AK220441|Morf4l1|21761|mortality factor 4 like 1	AK146210|Morf4l1|21761|mortality factor 4 like 1	AK168327|Morf4l1|21761|mortality factor 4 like 1	AK169065|Morf4l1|21761|mortality factor 4 like 1	AK168674|Morf4l1|21761|mortality factor 4 like 1	AB042241|Morf4l1|21761|mortality factor 4 like 1	AF319620|Morf4l1|21761|mortality factor 4 like 1	AF319621|Morf4l1|21761|mortality factor 4 like 1	BC085103|Morf4l1|21761|mortality factor 4 like 1	BC003894|Morf4l1|21761|mortality factor 4 like 1	BC017619|Morf4l1|21761|mortality factor 4 like 1	BC083118|Morf4l1|21761|mortality factor 4 like 1	BC092293|Morf4l1|21761|mortality factor 4 like 1	BC103783|Morf4l1|21761|mortality factor 4 like 1	AK011249|Morf4l1|21761|mortality factor 4 like 1	AK016414|Morf4l1|21761|mortality factor 4 like 1	NM_001039147|Morf4l1|21761|mortality factor 4 like 1	NM_024431|Morf4l1|21761|mortality factor 4 like 1
mm9_v1_chr11_-_42134548_42134554	0.349497	CCAGCAU	AK135145|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	AK137331|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	NM_001099641|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6	NM_008068|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chr8_-_23816962_23817062	0.346763	CCAGCAU	BC004772|Ikbkb|16150|inhibitor of kappaB kinase beta	BC019210|Ikbkb|16150|inhibitor of kappaB kinase beta	BC037723|Ikbkb|16150|inhibitor of kappaB kinase beta	AK151955|Ikbkb|16150|inhibitor of kappaB kinase beta	AK153151|Ikbkb|16150|inhibitor of kappaB kinase beta	AK150884|Ikbkb|16150|inhibitor of kappaB kinase beta	AK151888|Ikbkb|16150|inhibitor of kappaB kinase beta	AK155587|Ikbkb|16150|inhibitor of kappaB kinase beta	AK011359|Ikbkb|16150|inhibitor of kappaB kinase beta	AK139972|Ikbkb|16150|inhibitor of kappaB kinase beta	AK156294|Ikbkb|16150|inhibitor of kappaB kinase beta	AK144048|Ikbkb|16150|inhibitor of kappaB kinase beta	AK172275|Ikbkb|16150|inhibitor of kappaB kinase beta	AK051128|Ikbkb|16150|inhibitor of kappaB kinase beta	AK053346|Ikbkb|16150|inhibitor of kappaB kinase beta	AK144603|Ikbkb|16150|inhibitor of kappaB kinase beta	AK086442|Ikbkb|16150|inhibitor of kappaB kinase beta	NM_001159774|Ikbkb|16150|inhibitor of kappaB kinase beta	NM_010546|Ikbkb|16150|inhibitor of kappaB kinase beta
mm9_v1_chr15_-_96473193_96473343	0.346579	CCAGCAU	AK162612|Slc38a1|105727|solute carrier family 38, member 1	AK081724|Slc38a1|105727|solute carrier family 38, member 1	NM_001166458|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr1_-_65003291_65003407	0.341313	CCAGCAU	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr5_-_92757021_92757142	0.33852	CCAGCAU	AK042480|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	CT010194|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	BC003343|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157109|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK042017|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156012|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156029|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156453|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157118|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	NM_008599|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	M34815|Cxcl9|17329|chemokine (C-X-C motif) ligand 9
mm9_v1_chrX_+_70656434_70656441	0.333431	CCAGCAU	U47104|Zfp92|22754|zinc finger protein 92	AK141522|Zfp92|22754|zinc finger protein 92	NM_009566|Zfp92|22754|zinc finger protein 92
mm9_v1_chr3_+_96025040_96025063	0.332002	CCAGCAU	AK090189|Hist2h2be|319190|histone cluster 2, H2be	AK143398|Hist2h2be|319190|histone cluster 2, H2be	AK162494|Hist2h2be|319190|histone cluster 2, H2be	AK167546|Hist2h2be|319190|histone cluster 2, H2be	AK170749|Hist2h2be|319190|histone cluster 2, H2be	BC058562|Hist2h2be|319190|histone cluster 2, H2be	AK078533|Hist2h2be|319190|histone cluster 2, H2be	NM_178214|Hist2h2be|319190|histone cluster 2, H2be	AK168767|Hist2h2be|319190|histone cluster 2, H2be	BC047137|Hist2h2be|319190|histone cluster 2, H2be
mm9_v1_chr14_-_103746016_103746030	0.331562	CCAGCAU	AK149225|Mycbp2|105689|MYC binding protein 2	NM_207215|Mycbp2|105689|MYC binding protein 2	AK048441|Mycbp2|105689|MYC binding protein 2	AK081652|Mycbp2|105689|MYC binding protein 2
mm9_v1_chr5_+_110528987_110528987	0.314878	CCAGCAU	BC039627|Plcxd1|403178|phosphatidylinositol-specific phospholipase C, X domain containing 1	NM_207279|Plcxd1|403178|phosphatidylinositol-specific phospholipase C, X domain containing 1
mm9_v1_chr2_-_26264694_26264752	0.312072	CCAGCAU	AK170786|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AF226683|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	BC057566|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	BC080295|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	BC052717|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	NM_033134|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK170812|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK080075|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK047245|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK158135|Inpp5e|64436|inositol polyphosphate-5-phosphatase E	AK154097|Inpp5e|64436|inositol polyphosphate-5-phosphatase E
mm9_v1_chr7_-_29953665_29953665	0.310405	CCAGCAU	BC062119|Spred3|101809|sprouty-related, EVH1 domain containing 3	NM_182927|Spred3|101809|sprouty-related, EVH1 domain containing 3
mm9_v1_chr18_-_68459958_68459986	0.30896	CCAGCAU	AK077093|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene	NM_153794|4933403F05Rik|108654|RIKEN cDNA 4933403F05 gene
mm9_v1_chr12_+_86451782_86451862	0.303687	CCAGCAU	AK158877|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	NM_030225|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK019713|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK149664|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK168570|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK171100|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK028513|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK047270|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK054053|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK169943|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BC006702|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	CT010197|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
mm9_v1_chr14_-_34260323_34260352	0.303034	CCAGCAU	AK139498|Mapk8|26419|mitogen-activated protein kinase 8	AK032486|Mapk8|26419|mitogen-activated protein kinase 8	AK043102|Mapk8|26419|mitogen-activated protein kinase 8	AK085745|Mapk8|26419|mitogen-activated protein kinase 8	AK030767|Mapk8|26419|mitogen-activated protein kinase 8	NM_016700|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr15_+_75534706_75534718	0.298244	CCAGCAU	NM_001163465|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1	NM_008164|Rhpn1|14787|rhophilin, Rho GTPase binding protein 1
mm9_v1_chr8_-_42127242_42127289	0.295568	CCAGCAU	AK030510|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005865|Mtus1|102103|mitochondrial tumor suppressor 1	AY626781|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr9_+_57787915_57787952	0.294098	CCAGCAU	AK156123|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	BC057875|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	NM_011352|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AF030699|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AB017532|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AF176670|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm9_v1_chr4_-_106850812_106850984	0.281311	CCAGCAU	AK008694|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	BC028321|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	AK011991|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	AK008715|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene	NM_025617|2210012G02Rik|66526|RIKEN cDNA 2210012G02 gene
mm9_v1_chr2_+_156022382_156022502	0.278711	CCAGCAU	NM_172674|Phf20|228829|PHD finger protein 20	AK045309|Phf20|228829|PHD finger protein 20	AK033017|Phf20|228829|PHD finger protein 20	AK038573|Phf20|228829|PHD finger protein 20	AK142424|Phf20|228829|PHD finger protein 20	BC060121|Phf20|228829|PHD finger protein 20
mm9_v1_chr11_+_82724754_82724832	0.278359	CCAGCAU	NM_178680|Unc45b|217012|unc-45 homolog B (C. elegans)	AK084418|Unc45b|217012|unc-45 homolog B (C. elegans)	AK168968|Unc45b|217012|unc-45 homolog B (C. elegans)	AK081821|Unc45b|217012|unc-45 homolog B (C. elegans)	AK169274|Unc45b|217012|unc-45 homolog B (C. elegans)	AK052294|Unc45b|217012|unc-45 homolog B (C. elegans)	BC084585|Unc45b|217012|unc-45 homolog B (C. elegans)
mm9_v1_chr19_+_30078279_30078291	0.277779	CCAGCAU	AK016450|Trpd52l3|66745|tumor protein D52-like 3	BC125314|Trpd52l3|66745|tumor protein D52-like 3	BC125316|Trpd52l3|66745|tumor protein D52-like 3	NM_025741|Trpd52l3|66745|tumor protein D52-like 3	AK016362|Trpd52l3|66745|tumor protein D52-like 3
mm9_v1_chr4_-_57314708_57314708	0.277224	CCAGCAU	AK052928|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3	NM_011207|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3
mm9_v1_chr12_+_3891743_3891823	0.274398	CCAGCAU	AF480164|Dnmt3a|13435|DNA methyltransferase 3A	NM_153743|Dnmt3a|13435|DNA methyltransferase 3A	AK157792|Dnmt3a|13435|DNA methyltransferase 3A	AK077792|Dnmt3a|13435|DNA methyltransferase 3A	AK136170|Dnmt3a|13435|DNA methyltransferase 3A
mm9_v1_chr11_-_72303293_72303434	0.27326	CCAGCAU	AB441166|Spns2|216892|spinster homolog 2 (Drosophila)	NM_153060|Spns2|216892|spinster homolog 2 (Drosophila)	BC011467|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr7_-_53355395_53355639	0.272417	CCAGCAU	D50581|Kcnj11|16514|potassium inwardly rectifying channel, subfamily J, member 11	U73626|Kcnj11|16514|potassium inwardly rectifying channel, subfamily J, member 11	BC052731|Kcnj11|16514|potassium inwardly rectifying channel, subfamily J, member 11	BC057006|Kcnj11|16514|potassium inwardly rectifying channel, subfamily J, member 11	NM_010602|Kcnj11|16514|potassium inwardly rectifying channel, subfamily J, member 11
mm9_v1_chr15_-_77787128_77787170	0.269875	CCAGCAU	NM_001017983|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2	NM_001168260|Foxred2|239554|FAD-dependent oxidoreductase domain containing 2
mm9_v1_chr11_+_57615080_57615164	0.269462	CCAGCAU	BC051686|Sap30l|50724|SAP30-like	NM_001081168|Sap30l|50724|SAP30-like	BC094930|Sap30l|50724|SAP30-like
mm9_v1_chr1_-_133423902_133423973	0.265215	CCAGCAU	AK143649|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	NM_001081011|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2
mm9_v1_chr6_-_120481314_120481342	0.264528	CCAGCAU	BC014705|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	NM_144815|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	AK040291|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	AK044228|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	AK140387|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)
mm9_v1_chr12_-_47919695_47919761	0.263997	CCAGCAU	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr1_+_74901489_74901677	0.26282	CCAGCAU	NM_009872|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC100712|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC103550|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC100714|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	BC100715|Cdk5r2|12570|cyclin-dependent kinase 5, regulatory subunit 2 (p39)
mm9_v1_chr9_-_119932620_119932715	0.261948	CCAGCAU	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr7_+_25669603_25669732	0.260963	CCAGCAU	AK013524|Rps19|20085|ribosomal protein S19	AK031403|Rps19|20085|ribosomal protein S19	BC086938|Rps19|20085|ribosomal protein S19	AK012052|Rps19|20085|ribosomal protein S19	AK028244|Rps19|20085|ribosomal protein S19	BC034506|Rps19|20085|ribosomal protein S19	AK018725|Rps19|20085|ribosomal protein S19	NM_023133|Rps19|20085|ribosomal protein S19
mm9_v1_chr15_-_11835393_11835453	0.260306	CCAGCAU	D78175|Npr3|18162|natriuretic peptide receptor 3	BC055897|Npr3|18162|natriuretic peptide receptor 3	NM_001039181|Npr3|18162|natriuretic peptide receptor 3	NM_008728|Npr3|18162|natriuretic peptide receptor 3
mm9_v1_chr1_+_137695997_137696087	0.257104	CCAGCAU	AJ242874|Tnni1|21952|troponin I, skeletal, slow 1	NM_021467|Tnni1|21952|troponin I, skeletal, slow 1	AK012258|Tnni1|21952|troponin I, skeletal, slow 1	NM_001112702|Tnni1|21952|troponin I, skeletal, slow 1
mm9_v1_chr14_-_13178341_13178378	0.255497	CCAGCAU	AK019996|Fezf2|54713|Fez family zinc finger 2	BC055718|Fezf2|54713|Fez family zinc finger 2	NM_080433|Fezf2|54713|Fez family zinc finger 2
mm9_v1_chr2_-_25877230_25877291	0.247475	CCAGCAU	BC021811|Ubac1|98766|ubiquitin associated domain containing 1	NM_133835|Ubac1|98766|ubiquitin associated domain containing 1
mm9_v1_chr3_+_27081918_27081998	0.247438	CCAGCAU	AK128968|Nceh1|320024|arylacetamide deacetylase-like 1	AK038691|Nceh1|320024|arylacetamide deacetylase-like 1	AK045363|Nceh1|320024|arylacetamide deacetylase-like 1	AK085767|Nceh1|320024|arylacetamide deacetylase-like 1	NM_178772|Nceh1|320024|arylacetamide deacetylase-like 1	AK135837|Nceh1|320024|arylacetamide deacetylase-like 1	BC082569|Nceh1|320024|arylacetamide deacetylase-like 1	AK173158|Nceh1|320024|arylacetamide deacetylase-like 1	AK034339|Nceh1|320024|arylacetamide deacetylase-like 1
mm9_v1_chrX_-_133277456_133277461	0.246162	CCAGCAU	NM_001168227|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr13_+_55050729_55050861	0.242457	CCAGCAU	BC058084|Unc5a|107448|unc-5 homolog A (C. elegans)	AJ487852|Unc5a|107448|unc-5 homolog A (C. elegans)	NM_153131|Unc5a|107448|unc-5 homolog A (C. elegans)
mm9_v1_chr18_+_37164856_37165092	0.239687	CCAGCAU	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr6_-_91361356_91361402	0.23845	CCAGCAU	BC049093|Wnt7a|22421|wingless-related MMTV integration site 7A	BC057586|Wnt7a|22421|wingless-related MMTV integration site 7A	AK004683|Wnt7a|22421|wingless-related MMTV integration site 7A	NM_009527|Wnt7a|22421|wingless-related MMTV integration site 7A
mm9_v1_chr16_+_94550005_94550028	0.237392	CCAGCAU	AB063284|Ripply3|170765|ripply3 homolog (zebrafish)	NM_133229|Ripply3|170765|ripply3 homolog (zebrafish)
mm9_v1_chr18_-_56721902_56721984	0.232767	CCAGCAU	BC012407|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1	NM_138600|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr2_-_31701432_31701524	0.231624	CCAGCAU	AK046338|Fibcd1|98970|fibrinogen C domain containing 1	AK084379|Fibcd1|98970|fibrinogen C domain containing 1	BC060634|Fibcd1|98970|fibrinogen C domain containing 1	NM_178887|Fibcd1|98970|fibrinogen C domain containing 1
mm9_v1_chr4_+_33397279_33397404	0.23011	CCAGCAU	AK151463|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	NM_011884|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK150497|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160007|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK002922|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK079488|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK142016|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160706|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	BC043657|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK169305|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF034568|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF025653|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase
mm9_v1_chr13_-_49404519_49404608	0.22992	CCAGCAU	AK157835|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3	NM_015759|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3	AF017369|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3
mm9_v1_chr11_+_5855721_5855888	0.226046	CCAGCAU	NM_019661|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK002916|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK007486|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK147098|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK150472|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AK159253|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	BC006760|Ykt6|56418|YKT6 homolog (S. Cerevisiae)	AF076956|Ykt6|56418|YKT6 homolog (S. Cerevisiae)
mm9_v1_chr11_-_72080066_72080105	0.223403	CCAGCAU	AY368893|Slc13a5|237831|solute carrier family 13 (sodium-dependent citrate transporter), member 5	AK043499|Slc13a5|237831|solute carrier family 13 (sodium-dependent citrate transporter), member 5	AK048662|Slc13a5|237831|solute carrier family 13 (sodium-dependent citrate transporter), member 5	AK140943|Slc13a5|237831|solute carrier family 13 (sodium-dependent citrate transporter), member 5	AK158253|Slc13a5|237831|solute carrier family 13 (sodium-dependent citrate transporter), member 5	NM_001004148|Slc13a5|237831|solute carrier family 13 (sodium-dependent citrate transporter), member 5
mm9_v1_chr5_+_138526303_138526341	0.223366	CCAGCAU	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr15_-_3945704_3945774	0.22082	CCAGCAU	AK045350|AW549877|106064|expressed sequence AW549877	AK154940|AW549877|106064|expressed sequence AW549877	NM_145930|AW549877|106064|expressed sequence AW549877
mm9_v1_chr17_+_87362450_87362450	0.219602	CCAGCAU	BC056363|Rhoq|104215|ras homolog gene family, member Q	NM_145491|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr16_-_4964233_4964329	0.217519	CCAGCAU	BC050929|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	AK012494|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	BC051143|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	AK089037|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3	NM_028301|Anks3|72615|ankyrin repeat and sterile alpha motif domain containing 3
mm9_v1_chrX_-_133278223_133278228	0.217475	CCAGCAU	AK161610|Morf4l2|56397|mortality factor 4 like 2	AK166637|Morf4l2|56397|mortality factor 4 like 2	NM_001168228|Morf4l2|56397|mortality factor 4 like 2	NM_001168230|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr7_-_4990023_4990047	0.216783	CCAGCAU	BC147237|Zfp784|654801|zinc finger protein 784	BC147238|Zfp784|654801|zinc finger protein 784	AK050452|Zfp784|654801|zinc finger protein 784	AK161791|Zfp784|654801|zinc finger protein 784	NM_001039532|Zfp784|654801|zinc finger protein 784
mm9_v1_chr5_-_138596915_138596971	0.21398	CCAGCAU	BC052453|Zfp113|56314|zinc finger protein 113	BC054525|Zfp113|56314|zinc finger protein 113	BC056991|Zfp113|56314|zinc finger protein 113	AF167320|Zfp113|56314|zinc finger protein 113	AK076349|Zfp113|56314|zinc finger protein 113	AK220556|Zfp113|56314|zinc finger protein 113	NM_019747|Zfp113|56314|zinc finger protein 113
mm9_v1_chr10_-_110447050_110447195	0.213551	CCAGCAU	BC027101|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK162922|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC080664|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC058772|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK046891|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC117788|Zdhhc17|320150|zinc finger, DHHC domain containing 17	BC117789|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK038670|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK038681|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK134967|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK039575|Zdhhc17|320150|zinc finger, DHHC domain containing 17	NM_172554|Zdhhc17|320150|zinc finger, DHHC domain containing 17	AK122406|Zdhhc17|320150|zinc finger, DHHC domain containing 17
mm9_v1_chr11_+_49944855_49944942	0.209191	CCAGCAU	NM_029745|Tbc1d9b|76795|TBC1 domain family, member 9B	BC062928|Tbc1d9b|76795|TBC1 domain family, member 9B	AK166472|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065080|Tbc1d9b|76795|TBC1 domain family, member 9B	AK035457|Tbc1d9b|76795|TBC1 domain family, member 9B	AK147964|Tbc1d9b|76795|TBC1 domain family, member 9B	AK049999|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065130|Tbc1d9b|76795|TBC1 domain family, member 9B	AK172999|Tbc1d9b|76795|TBC1 domain family, member 9B
mm9_v1_chr3_+_103083215_103083215	0.202863	CCAGCAU	AY458590|Trim33|94093|tripartite motif-containing 33	NM_001079830|Trim33|94093|tripartite motif-containing 33	NM_053170|Trim33|94093|tripartite motif-containing 33
mm9_v1_chr15_-_96472392_96472392	0.202152	CCAGCAU	AK034130|Slc38a1|105727|solute carrier family 38, member 1	NM_134086|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr15_+_100446018_100446129	0.199409	CCAGCAU	AK002595|Dazap2|23994|DAZ associated protein 2	AK145398|Dazap2|23994|DAZ associated protein 2	AK146970|Dazap2|23994|DAZ associated protein 2	L10906|Dazap2|23994|DAZ associated protein 2	AK088916|Dazap2|23994|DAZ associated protein 2	AK132139|Dazap2|23994|DAZ associated protein 2	AK137246|Dazap2|23994|DAZ associated protein 2	BC014808|Dazap2|23994|DAZ associated protein 2	NM_011873|Dazap2|23994|DAZ associated protein 2	BC083347|Dazap2|23994|DAZ associated protein 2	AF085348|Dazap2|23994|DAZ associated protein 2
mm9_v1_chr14_-_21871647_21871707	0.196708	CCAGCAU	AF242857|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	NM_018829|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr7_-_13639862_13640112	0.189468	CCAGCAU	BC129904|Mzf1|109889|myeloid zinc finger 1	BC129905|Mzf1|109889|myeloid zinc finger 1	AK145014|Mzf1|109889|myeloid zinc finger 1	AB088478|Mzf1|109889|myeloid zinc finger 1	BC060649|Mzf1|109889|myeloid zinc finger 1	AK030410|Mzf1|109889|myeloid zinc finger 1	NM_145819|Mzf1|109889|myeloid zinc finger 1
mm9_v1_chr2_+_167757825_167757866	0.183957	CCAGCAU	AK157431|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	NM_011201|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK165567|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr19_-_11893333_11893421	0.180883	CCAGCAU	D29799|Stx3|20908|syntaxin 3	NM_011502|Stx3|20908|syntaxin 3	AK038415|Stx3|20908|syntaxin 3	AK133830|Stx3|20908|syntaxin 3
mm9_v1_chr8_+_85814244_85814260	0.179582	CCAGCAU	NM_009463|Ucp1|22227|uncoupling protein 1 (mitochondrial, proton carrier)	AK002759|Ucp1|22227|uncoupling protein 1 (mitochondrial, proton carrier)	AK076454|Ucp1|22227|uncoupling protein 1 (mitochondrial, proton carrier)	U63419|Ucp1|22227|uncoupling protein 1 (mitochondrial, proton carrier)	BC012701|Ucp1|22227|uncoupling protein 1 (mitochondrial, proton carrier)
mm9_v1_chr5_+_43624701_43624701	0.178308	CCAGCAU	NM_001177379|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2	NM_175937|Cpeb2|231207|cytoplasmic polyadenylation element binding protein 2
mm9_v1_chr11_+_60513191_60513346	0.175151	CCAGCAU	NM_001159404|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_001159405|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_008502|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC055399|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	AK159412|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	D16141|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC050913|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)
mm9_v1_chrX_+_71019741_71019765	0.171775	CCAGCAU	AK004696|Srpk3|56504|serine/arginine-rich protein specific kinase 3	AF043288|Srpk3|56504|serine/arginine-rich protein specific kinase 3	NM_019684|Srpk3|56504|serine/arginine-rich protein specific kinase 3	BC120883|Srpk3|56504|serine/arginine-rich protein specific kinase 3	BC120884|Srpk3|56504|serine/arginine-rich protein specific kinase 3
mm9_v1_chr18_+_43367236_43367350	0.168744	CCAGCAU	AK042599|Stk32a|269019|serine/threonine kinase 32A	BC055002|Stk32a|269019|serine/threonine kinase 32A	AK044474|Stk32a|269019|serine/threonine kinase 32A	AK036266|Stk32a|269019|serine/threonine kinase 32A	NM_178749|Stk32a|269019|serine/threonine kinase 32A
mm9_v1_chr8_+_90642636_90642724	0.167566	CCAGCAU	NM_029074|Tmem188|382030|transmembrane protein 188	AK146578|Tmem188|382030|transmembrane protein 188	BC018498|Tmem188|382030|transmembrane protein 188	AK017198|Tmem188|382030|transmembrane protein 188	BC094385|Tmem188|382030|transmembrane protein 188	BC118981|Tmem188|382030|transmembrane protein 188	BC148291|Tmem188|382030|transmembrane protein 188
mm9_v1_chr19_-_5388655_5388722	0.167143	CCAGCAU	AB014721|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	AK088341|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	BC028823|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	BC051394|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	AF129931|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	NM_016882|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1
mm9_v1_chr6_-_99616745_99616839	0.16081	CCAGCAU	AY628329|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK007268|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	BC027014|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK005054|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	NM_025829|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK035794|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3
mm9_v1_chr19_+_53403902_53404133	0.157121	CCAGCAU	NM_010847|Mxi1|17859|Max interacting protein 1	AK144219|Mxi1|17859|Max interacting protein 1	AK017637|Mxi1|17859|Max interacting protein 1	AK140465|Mxi1|17859|Max interacting protein 1	L38822|Mxi1|17859|Max interacting protein 1	U24674|Mxi1|17859|Max interacting protein 1
mm9_v1_chr6_-_86347093_86347158	0.153746	CCAGCAU	AK049412|Pcyox1|66881|prenylcysteine oxidase 1	AK033373|Pcyox1|66881|prenylcysteine oxidase 1	AK004799|Pcyox1|66881|prenylcysteine oxidase 1	AK004840|Pcyox1|66881|prenylcysteine oxidase 1	AK031585|Pcyox1|66881|prenylcysteine oxidase 1	AK159981|Pcyox1|66881|prenylcysteine oxidase 1	AK161616|Pcyox1|66881|prenylcysteine oxidase 1	AK169209|Pcyox1|66881|prenylcysteine oxidase 1	AK145366|Pcyox1|66881|prenylcysteine oxidase 1	AK147190|Pcyox1|66881|prenylcysteine oxidase 1	BC028308|Pcyox1|66881|prenylcysteine oxidase 1	AK134528|Pcyox1|66881|prenylcysteine oxidase 1	NM_025823|Pcyox1|66881|prenylcysteine oxidase 1
mm9_v1_chr13_+_64533703_64533885	0.153687	CCAGCAU	AY005133|Cdk20|105278|cyclin-dependent kinase 20	BC031907|Cdk20|105278|cyclin-dependent kinase 20	NM_053180|Cdk20|105278|cyclin-dependent kinase 20	BC058353|Cdk20|105278|cyclin-dependent kinase 20
mm9_v1_chr2_+_126834431_126834485	0.152463	CCAGCAU	NM_175550|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK143351|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK163701|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK039257|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK036944|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1	AK144636|Ap4e1|108011|adaptor-related protein complex AP-4, epsilon 1
mm9_v1_chr8_+_130882920_130882997	0.151738	CCAGCAU	AK082992|Nrp1|18186|neuropilin 1	AK083052|Nrp1|18186|neuropilin 1	AK164378|Nrp1|18186|neuropilin 1	NM_008737|Nrp1|18186|neuropilin 1	BC026730|Nrp1|18186|neuropilin 1	BC032048|Nrp1|18186|neuropilin 1	AK148372|Nrp1|18186|neuropilin 1
mm9_v1_chr6_-_122692754_122692762	0.146173	CCAGCAU	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr14_+_104049453_104049469	0.14465	CCAGCAU	BC079866|Slain1|105439|SLAIN motif family, member 1	NM_198014|Slain1|105439|SLAIN motif family, member 1
mm9_v1_chr8_+_11312828_11312937	0.140567	CCAGCAU	AK053858|Col4a2|12827|collagen, type IV, alpha 2	NM_009932|Col4a2|12827|collagen, type IV, alpha 2	AK164096|Col4a2|12827|collagen, type IV, alpha 2	BC080789|Col4a2|12827|collagen, type IV, alpha 2	BC107685|Col4a2|12827|collagen, type IV, alpha 2
mm9_v1_chr8_-_8690519_8690552	0.134963	CCAGCAU	BC046971|Arglu1|234023|arginine and glutamate rich 1	NM_176849|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr16_-_32003226_32003372	0.1345	CCAGCAU	AK158338|Senp5|320213|SUMO/sentrin specific peptidase 5	AY522918|Senp5|320213|SUMO/sentrin specific peptidase 5	BC080830|Senp5|320213|SUMO/sentrin specific peptidase 5	AK043171|Senp5|320213|SUMO/sentrin specific peptidase 5	AK042087|Senp5|320213|SUMO/sentrin specific peptidase 5	AK028177|Senp5|320213|SUMO/sentrin specific peptidase 5	NM_177103|Senp5|320213|SUMO/sentrin specific peptidase 5
mm9_v1_chr11_-_66339627_66339627	0.127785	CCAGCAU	AK147504|Shisa6|380702|shisa homolog 6 (Xenopus laevis)	NM_001034874|Shisa6|380702|shisa homolog 6 (Xenopus laevis)
mm9_v1_chr19_-_10904345_10904547	0.126184	CCAGCAU	U12434|Cd6|12511|CD6 antigen	U35370|Cd6|12511|CD6 antigen	U37543|Cd6|12511|CD6 antigen	U37544|Cd6|12511|CD6 antigen	AK030822|Cd6|12511|CD6 antigen	AK088050|Cd6|12511|CD6 antigen	BC014294|Cd6|12511|CD6 antigen	AK030823|Cd6|12511|CD6 antigen	NM_001037801|Cd6|12511|CD6 antigen	NM_009852|Cd6|12511|CD6 antigen
mm9_v1_chr14_-_52723590_52723721	0.125577	CCAGCAU	AK214960|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK184811|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	BC095922|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AF095257|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK012633|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	BC004706|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK011336|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK088678|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK169287|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK168802|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK010845|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK150399|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK019958|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK088245|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK151446|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK153053|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK089061|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	AK166590|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170981|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170982|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170983|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_001170984|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C	NM_016884|Hnrnpc|15381|heterogeneous nuclear ribonucleoprotein C
mm9_v1_chr5_-_92512486_92512611	0.124652	CCAGCAU	AK153893|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK153221|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK151732|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080794|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080796|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	BC119806|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	BC122883|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr14_+_55502261_55502285	0.121594	CCAGCAU	AF030769|Bcl2l2|12050|BCL2-like 2	NM_007537|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr3_-_57379831_57379833	0.119735	CCAGCAU	AK142299|Wwtr1|97064|WW domain containing transcription regulator 1	NM_001168281|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chr5_-_151397024_151397110	0.118724	CCAGCAU	AK042145|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK046116|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK138666|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK155341|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK131647|N4bp2l1|100637|NEDD4 binding protein 2-like 1	NM_133898|N4bp2l1|100637|NEDD4 binding protein 2-like 1	AK010587|N4bp2l1|100637|NEDD4 binding protein 2-like 1
mm9_v1_chr15_+_10930475_10930567	0.104624	CCAGCAU	AK029155|Slc45a2|22293|solute carrier family 45, member 2	NM_053077|Slc45a2|22293|solute carrier family 45, member 2	AK148207|Slc45a2|22293|solute carrier family 45, member 2	BC125376|Slc45a2|22293|solute carrier family 45, member 2	BC132429|Slc45a2|22293|solute carrier family 45, member 2	AK089932|Slc45a2|22293|solute carrier family 45, member 2	AY034377|Slc45a2|22293|solute carrier family 45, member 2	AF360357|Slc45a2|22293|solute carrier family 45, member 2
mm9_v1_chr5_-_145927929_145927972	0.0990311	CCAGCAU	AK151064|Ptcd1|71799|pentatricopeptide repeat domain 1	AK152077|Ptcd1|71799|pentatricopeptide repeat domain 1	AK153366|Ptcd1|71799|pentatricopeptide repeat domain 1	NM_133735|Ptcd1|71799|pentatricopeptide repeat domain 1
mm9_v1_chrX_+_130442964_130443234	0.0877896	CCAGCAU	NM_001083895|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	NM_026838|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	AK136935|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	BC028307|Srpx2|68792|sushi-repeat-containing protein, X-linked 2
mm9_v1_chr6_+_86145220_86145449	0.0853848	CCAGCAU	AK010785|Tgfa|21802|transforming growth factor alpha	AK165017|Tgfa|21802|transforming growth factor alpha	NM_031199|Tgfa|21802|transforming growth factor alpha	AK166321|Tgfa|21802|transforming growth factor alpha	U65016|Tgfa|21802|transforming growth factor alpha	BC132185|Tgfa|21802|transforming growth factor alpha	BC132211|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr1_+_138364511_138364534	0.0832988	CCAGCAU	BC158132|Kif14|381293|kinesin family member 14	NM_001081258|Kif14|381293|kinesin family member 14
mm9_v1_chr3_-_10301182_10301182	0.0824151	CCAGCAU	BC030910|Fabp12|75497|fatty acid binding protein 12	NM_029310|Fabp12|75497|fatty acid binding protein 12
mm9_v1_chr8_+_18846262_18846328	0.0788227	CCAGCAU	BC062903|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	NM_026792|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK155378|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AY161042|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
mm9_v1_chr1_-_75188496_75188528	0.071672	CCAGCAU	AM085510|Atg9a|245860|autophagy-related 9A (yeast)	BC056488|Atg9a|245860|autophagy-related 9A (yeast)	NM_001003917|Atg9a|245860|autophagy-related 9A (yeast)	BC079884|Atg9a|245860|autophagy-related 9A (yeast)
mm9_v1_chr5_-_105568547_105568604	0.0671795	CCAGCAU	AK220567|Gbp4|17472|guanylate binding protein 4	AK155365|Gbp8|76074|guanylate-binding protein 8	NM_008620|Gbp4|17472|guanylate binding protein 4	EF494423|Gbp4|17472|guanylate binding protein 4	EF494424|Gbp4|17472|guanylate binding protein 4
mm9_v1_chr3_+_84756090_84756352	0.0622361	CCAGCAU	AF391192|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_080428|Fbxw7|50754|F-box and WD-40 domain protein 7	AF427101|Fbxw7|50754|F-box and WD-40 domain protein 7	BC131648|Fbxw7|50754|F-box and WD-40 domain protein 7	AB221593|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr9_+_122026378_122026421	0.0620422	CCAGCAU	NM_001164572|Snrk|20623|SNF related kinase	NM_133741|Snrk|20623|SNF related kinase
mm9_v1_chr13_-_70980619_70980688	0.0618191	CCAGCAU	AK173338|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	AK031314|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	AK134523|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	NM_172053|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	BC034739|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
mm9_v1_chr16_+_4726348_4726451	0.0612683	CCAGCAU	NM_001136066|Hmox2|15369|heme oxygenase (decycling) 2	AK134536|Hmox2|15369|heme oxygenase (decycling) 2	BC002011|Hmox2|15369|heme oxygenase (decycling) 2	AK032175|Hmox2|15369|heme oxygenase (decycling) 2	AF054670|Hmox2|15369|heme oxygenase (decycling) 2	AK152936|Hmox2|15369|heme oxygenase (decycling) 2
mm9_v1_chr1_-_80210403_80210518	0.0603228	CCAGCAU	BC150872|Fam124b|241128|family with sequence similarity 124, member B	AK043867|Fam124b|241128|family with sequence similarity 124, member B	NM_173425|Fam124b|241128|family with sequence similarity 124, member B
mm9_v1_chr11_-_100259048_100259060	0.0588808	CCAGCAU	BC040757|Jup|16480|junction plakoglobin	NM_010593|Jup|16480|junction plakoglobin	BC094461|Jup|16480|junction plakoglobin
mm9_v1_chr2_+_30271550_30271576	0.0544146	CCAGCAU	AK031591|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	NM_138748|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr2_+_163519756_163519774	0.0500607	CCAGCAU	NM_011106|Pkig|18769|protein kinase inhibitor, gamma	U97170|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr17_-_24787217_24787278	0.0499615	CCAGCAU	AB026489|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	BC070458|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK169007|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK170057|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK039491|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK004710|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK075800|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK075813|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK084801|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_023055|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm9_v1_chr5_+_45911467_45911626	0.0496616	CCAGCAU	NM_025895|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK007855|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AF318060|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK154249|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	BC024941|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK003854|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK005681|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)	AK201969|Med28|66999|mediator of RNA polymerase II transcription, subunit 28 homolog (yeast)
mm9_v1_chr2_-_163223660_163223751	0.0439648	CCAGCAU	AB024447|Jph2|59091|junctophilin 2	NM_021566|Jph2|59091|junctophilin 2	AK157145|Jph2|59091|junctophilin 2
mm9_v1_chr7_-_139978601_139978617	0.0430667	CCAGCAU	BC035523|Fam53b|77938|family with sequence similarity 53, member B	AK020830|Fam53b|77938|family with sequence similarity 53, member B	NM_175268|Fam53b|77938|family with sequence similarity 53, member B
mm9_v1_chr3_+_80840337_80840337	0.0311868	CCAGCAU	AF266467|Pdgfc|54635|platelet-derived growth factor, C polypeptide	NM_019971|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr15_-_84818368_84818512	0.0306785	CCAGCAU	AK149782|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	NM_001033273|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene	AK170532|5031439G07Rik|223739|RIKEN cDNA 5031439G07 gene
mm9_v1_chr6_-_55082834_55083009	0.025631	CCAGCAU	FJ548565|Crhr2|12922|corticotropin releasing hormone receptor 2	U17858|Crhr2|12922|corticotropin releasing hormone receptor 2	BC137592|Crhr2|12922|corticotropin releasing hormone receptor 2	U21729|Crhr2|12922|corticotropin releasing hormone receptor 2	AK142261|Crhr2|12922|corticotropin releasing hormone receptor 2	NM_009953|Crhr2|12922|corticotropin releasing hormone receptor 2	U19939|Crhr2|12922|corticotropin releasing hormone receptor 2	AK085854|Crhr2|12922|corticotropin releasing hormone receptor 2
mm9_v1_chr4_-_126106749_126106807	0.0242128	CCAGCAU	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr7_+_52198609_52198630	0.0240551	CCAGCAU	NM_001077591|Tsks|22116|testis-specific serine kinase substrate	NM_011651|Tsks|22116|testis-specific serine kinase substrate	AF025310|Tsks|22116|testis-specific serine kinase substrate	BC118618|Tsks|22116|testis-specific serine kinase substrate	BC121827|Tsks|22116|testis-specific serine kinase substrate
mm9_v1_chr16_+_17070249_17070422	0.0220403	CCAGCAU	AK011452|Ypel1|106369|yippee-like 1 (Drosophila)	AK076063|Ypel1|106369|yippee-like 1 (Drosophila)	AK133401|Ypel1|106369|yippee-like 1 (Drosophila)	AF190624|Ypel1|106369|yippee-like 1 (Drosophila)	BC049737|Ypel1|106369|yippee-like 1 (Drosophila)	AK139453|Ypel1|106369|yippee-like 1 (Drosophila)	AK006137|Ypel1|106369|yippee-like 1 (Drosophila)	AK006858|Ypel1|106369|yippee-like 1 (Drosophila)	AK005955|Ypel1|106369|yippee-like 1 (Drosophila)	AK006049|Ypel1|106369|yippee-like 1 (Drosophila)	AK019819|Ypel1|106369|yippee-like 1 (Drosophila)	AK014931|Ypel1|106369|yippee-like 1 (Drosophila)	NM_023249|Ypel1|106369|yippee-like 1 (Drosophila)	AK018910|Ypel1|106369|yippee-like 1 (Drosophila)	AK006505|Ypel1|106369|yippee-like 1 (Drosophila)
mm9_v1_chr9_+_113721698_113721717	0.0215096	CCAGCAU	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr9_-_71619329_71619430	0.0174822	CCAGCAU	AK040774|Cgnl1|68178|cingulin-like 1	AB186125|Cgnl1|68178|cingulin-like 1	AK081179|Cgnl1|68178|cingulin-like 1	AK036871|Cgnl1|68178|cingulin-like 1	NM_026599|Cgnl1|68178|cingulin-like 1
mm9_v1_chr8_+_74405966_74406017	0.0155285	CCAGCAU	AK031294|Zfp709|236193|zinc finger protein 709	NM_145624|Zfp709|236193|zinc finger protein 709	AK168304|Zfp709|236193|zinc finger protein 709	BC021921|Zfp709|236193|zinc finger protein 709
mm9_v1_chr1_+_87942437_87942543	0.0116973	CCAGCAU	BC137675|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	BC144821|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144992|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144993|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene
mm9_v1_chr4_-_153514316_153514316	0.00451077	CCAGCAU	NM_011642|Trp73|22062|transformation related protein 73	Y19234|Trp73|22062|transformation related protein 73
mm9_v1_chr4_-_49533914_49533978	0.00439275	CCAGCAU	AK075787|Mrpl50|28028|mitochondrial ribosomal protein L50	AK002646|Mrpl50|28028|mitochondrial ribosomal protein L50	AK049421|Mrpl50|28028|mitochondrial ribosomal protein L50	AK007405|Mrpl50|28028|mitochondrial ribosomal protein L50	AK031229|Mrpl50|28028|mitochondrial ribosomal protein L50	NM_178603|Mrpl50|28028|mitochondrial ribosomal protein L50	AK002686|Mrpl50|28028|mitochondrial ribosomal protein L50
mm9_v1_chr11_+_64248779_64248833	0.00321926	CCAGCAU	BC094320|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	AK051284|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	NM_178870|Hs3st3a1|15478|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
mm9_v1_chr11_+_78059210_78059318	0.00274443	CCAGCAU	BC058798|Sdf2|20316|stromal cell derived factor 2	NM_009143|Sdf2|20316|stromal cell derived factor 2
