mm9_v1_chr1_+_89991575_89991689	20.7978	CRX.p2	NM_201642|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK159496|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK128918|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK162317|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK165465|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK154973|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141205|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	BC141206|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AY227199|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK144599|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C	AK153157|Ugt1a7c|394432|UDP glucuronosyltransferase 1 family, polypeptide A7C
mm9_v1_chr5_-_101001209_101001243	20.6106	CRX.p2	AF263458|Plac8|231507|placenta-specific 8	AK007369|Plac8|231507|placenta-specific 8	NM_139198|Plac8|231507|placenta-specific 8	AJ422151|Plac8|231507|placenta-specific 8
mm9_v1_chr3_-_8964045_8964059	19.4425	CRX.p2	AY048852|Tpd52|21985|tumor protein D52	NM_001025261|Tpd52|21985|tumor protein D52	NM_001025262|Tpd52|21985|tumor protein D52
mm9_v1_chrX_-_9046362_9046456	18.1399	CRX.p2	U43384|Cybb|13058|cytochrome b-245, beta polypeptide	AK033570|Cybb|13058|cytochrome b-245, beta polypeptide	AK053920|Cybb|13058|cytochrome b-245, beta polypeptide	AK079926|Cybb|13058|cytochrome b-245, beta polypeptide	BC071229|Cybb|13058|cytochrome b-245, beta polypeptide	BC042838|Cybb|13058|cytochrome b-245, beta polypeptide	AK152257|Cybb|13058|cytochrome b-245, beta polypeptide	AK153154|Cybb|13058|cytochrome b-245, beta polypeptide	AK153259|Cybb|13058|cytochrome b-245, beta polypeptide	AK171526|Cybb|13058|cytochrome b-245, beta polypeptide	FJ168469|Cybb|13058|cytochrome b-245, beta polypeptide	AK154126|Cybb|13058|cytochrome b-245, beta polypeptide	NM_007807|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr1_+_89951985_89952026	15.9082	CRX.p2	BC089569|Ugt1a10|394430|UDP glycosyltransferase 1 family, polypeptide A10	NM_201641|Ugt1a10|394430|UDP glycosyltransferase 1 family, polypeptide A10	AY227201|Ugt1a10|394430|UDP glycosyltransferase 1 family, polypeptide A10
mm9_v1_chr2_-_58012447_58012596	15.4383	CRX.p2	AF192525|Cytip|227929|cytohesin 1 interacting protein	AK089364|Cytip|227929|cytohesin 1 interacting protein	AF374273|Cytip|227929|cytohesin 1 interacting protein	AK152784|Cytip|227929|cytohesin 1 interacting protein	AK169575|Cytip|227929|cytohesin 1 interacting protein	BC007144|Cytip|227929|cytohesin 1 interacting protein	AK168343|Cytip|227929|cytohesin 1 interacting protein	AK037842|Cytip|227929|cytohesin 1 interacting protein	AK157859|Cytip|227929|cytohesin 1 interacting protein	AK166254|Cytip|227929|cytohesin 1 interacting protein	AK170544|Cytip|227929|cytohesin 1 interacting protein	AK170796|Cytip|227929|cytohesin 1 interacting protein	AK171467|Cytip|227929|cytohesin 1 interacting protein	AK172380|Cytip|227929|cytohesin 1 interacting protein	NM_139200|Cytip|227929|cytohesin 1 interacting protein	AK170301|Cytip|227929|cytohesin 1 interacting protein	AK172071|Cytip|227929|cytohesin 1 interacting protein	AK030882|Cytip|227929|cytohesin 1 interacting protein
mm9_v1_chr3_+_127494295_127494302	15.4085	CRX.p2	AK041891|Tifa|211550|TRAF-interacting protein with forkhead-associated domain
mm9_v1_chr1_-_173537404_173537546	15.3196	CRX.p2	M84412|Ly9|17085|lymphocyte antigen 9	BC055380|Ly9|17085|lymphocyte antigen 9	BC066212|Ly9|17085|lymphocyte antigen 9	AB196804|Ly9|17085|lymphocyte antigen 9	AB196805|Ly9|17085|lymphocyte antigen 9	AB196806|Ly9|17085|lymphocyte antigen 9	AB196807|Ly9|17085|lymphocyte antigen 9	AK087345|Ly9|17085|lymphocyte antigen 9	BC095921|Ly9|17085|lymphocyte antigen 9	AK134106|Ly9|17085|lymphocyte antigen 9	AK150121|Ly9|17085|lymphocyte antigen 9	AK042288|Ly9|17085|lymphocyte antigen 9	AK088815|Ly9|17085|lymphocyte antigen 9	AK040306|Ly9|17085|lymphocyte antigen 9	NM_008534|Ly9|17085|lymphocyte antigen 9	AF244130|Ly9|17085|lymphocyte antigen 9	AF244131|Ly9|17085|lymphocyte antigen 9
mm9_v1_chr19_-_11679293_11679315	15.1772	CRX.p2	NM_026835|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D
mm9_v1_chr19_-_11679242_11679284	14.9871	CRX.p2	BC029738|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AF237911|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AY039037|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AK156878|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AK152859|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	AK004295|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D
mm9_v1_chr5_-_101001191_101001194	14.5375	CRX.p2	BC010789|Plac8|231507|placenta-specific 8
mm9_v1_chr15_+_31154178_31154275	13.8192	CRX.p2	BC024876|Dap|223453|death-associated protein	BC010828|Dap|223453|death-associated protein	AK169162|Dap|223453|death-associated protein	BC057669|Dap|223453|death-associated protein	AK167579|Dap|223453|death-associated protein	AK014991|Dap|223453|death-associated protein	AK167688|Dap|223453|death-associated protein
mm9_v1_chr10_+_87321789_87322010	13.6233	CRX.p2	NM_001111275|Igf1|16000|insulin-like growth factor 1	NM_010512|Igf1|16000|insulin-like growth factor 1	AK050118|Igf1|16000|insulin-like growth factor 1	AK081019|Igf1|16000|insulin-like growth factor 1	AK165471|Igf1|16000|insulin-like growth factor 1	AY878192|Igf1|16000|insulin-like growth factor 1	AY878193|Igf1|16000|insulin-like growth factor 1	AK052033|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr2_+_145686377_145686454	12.8315	CRX.p2	AK014548|Rin2|74030|Ras and Rab interactor 2	AK040763|Rin2|74030|Ras and Rab interactor 2	AK152025|Rin2|74030|Ras and Rab interactor 2	BC005529|Rin2|74030|Ras and Rab interactor 2	AK154421|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr5_+_115347750_115347773	12.0861	CRX.p2	AK160630|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr8_-_124948837_124948876	11.9668	CRX.p2	
mm9_v1_chr10_-_61960613_61960625	11.858	CRX.p2	AK087960|Srgn|19073|serglycin
mm9_v1_chr2_-_51828671_51828727	11.7079	CRX.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr1_+_90062550_90062608	11.6267	CRX.p2	AY227196|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5	NM_201643|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5	BC139093|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5	BC139094|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5
mm9_v1_chr9_+_89949315_89949397	11.3374	CRX.p2	AK157376|Ctsh|13036|cathepsin H	AK171550|Ctsh|13036|cathepsin H	U06119|Ctsh|13036|cathepsin H	BC080767|Ctsh|13036|cathepsin H	AK151877|Ctsh|13036|cathepsin H	BC006878|Ctsh|13036|cathepsin H	AK017638|Ctsh|13036|cathepsin H	AK160026|Ctsh|13036|cathepsin H	AK167498|Ctsh|13036|cathepsin H	AK150583|Ctsh|13036|cathepsin H	AK149949|Ctsh|13036|cathepsin H
mm9_v1_chr8_-_112103065_112103072	10.9153	CRX.p2	NM_017370|Hp|15439|haptoglobin
mm9_v1_chr6_+_67846144_67846176	10.8776	CRX.p2	
mm9_v1_chr2_-_51828440_51828551	10.6881	CRX.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr10_-_60561786_60561820	10.5151	CRX.p2	
mm9_v1_chr1_+_89967340_89967428	10.2043	CRX.p2	NM_201644|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	AY227200|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC138699|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC146021|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	BC019434|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	L27122|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9	S57479|Ugt1a9|394434|UDP glucuronosyltransferase 1 family, polypeptide A9
mm9_v1_chr10_-_60561763_60561769	10.0151	CRX.p2	
mm9_v1_chr5_+_104868321_104868417	9.82906	CRX.p2	BC014284|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr7_+_4225744_4225790	9.73871	CRX.p2	NM_011093|Pira6|18729|paired-Ig-like receptor A6	U96687|Pira6|18729|paired-Ig-like receptor A6	AF041035|Pira6|18729|paired-Ig-like receptor A6	NM_008848|Pira6|18729|paired-Ig-like receptor A6
mm9_v1_chr19_-_41289262_41289457	9.65705	CRX.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr4_-_19849637_19849704	9.59468	CRX.p2	AK089507|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	BC087899|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170578|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170659|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AB088358|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170405|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170072|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK137586|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AY517482|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr4_-_19849712_19849751	9.53792	CRX.p2	AY145896|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	NM_175406|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK075745|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr6_-_39050297_39050406	9.39419	CRX.p2	BC024579|Parp12|243771|poly (ADP-ribose) polymerase family, member 12
mm9_v1_chr11_-_83388330_83388380	9.20879	CRX.p2	AK151953|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr17_+_87762817_87762839	9.15923	CRX.p2	BC057906|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr2_+_145685882_145685886	9.08313	CRX.p2	AK163047|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr14_-_122314994_122315068	9.04135	CRX.p2	AK172401|Gpr18|110168|G protein-coupled receptor 18	BC034872|Gpr18|110168|G protein-coupled receptor 18	NM_182806|Gpr18|110168|G protein-coupled receptor 18	AK157029|Gpr18|110168|G protein-coupled receptor 18	AK156868|Gpr18|110168|G protein-coupled receptor 18	AK156039|Gpr18|110168|G protein-coupled receptor 18
mm9_v1_chr1_+_90062617_90062631	8.77864	CRX.p2	AB094481|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5
mm9_v1_chr2_-_103104559_103104567	8.66453	CRX.p2	BC012652|Ehf|13661|ets homologous factor
mm9_v1_chr7_-_91763744_91763768	8.6425	CRX.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr3_+_116564564_116564609	8.44543	CRX.p2	NM_009146|Frrs1|20321|ferric-chelate reductase 1	AK075573|Frrs1|20321|ferric-chelate reductase 1	AK144933|Frrs1|20321|ferric-chelate reductase 1	AK162693|Frrs1|20321|ferric-chelate reductase 1	D50464|Frrs1|20321|ferric-chelate reductase 1
mm9_v1_chr6_+_123212210_123212220	8.23388	CRX.p2	BC099471|Clec4d|17474|C-type lectin domain family 4, member d	AK150926|Clec4d|17474|C-type lectin domain family 4, member d
mm9_v1_chr5_-_104406333_104406376	8.15406	CRX.p2	AY101768|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13
mm9_v1_chr19_+_47938880_47939051	8.1279	CRX.p2	AK187657|Gsto1|14873|glutathione S-transferase omega 1	AK187708|Gsto1|14873|glutathione S-transferase omega 1	AK209032|Gsto1|14873|glutathione S-transferase omega 1
mm9_v1_chr14_+_75576599_75576717	8.03394	CRX.p2	AK088202|Lcp1|18826|lymphocyte cytosolic protein 1	U82610|Lcp1|18826|lymphocyte cytosolic protein 1	AK169728|Lcp1|18826|lymphocyte cytosolic protein 1	AK171751|Lcp1|18826|lymphocyte cytosolic protein 1	AK030996|Lcp1|18826|lymphocyte cytosolic protein 1	AK169972|Lcp1|18826|lymphocyte cytosolic protein 1	AK167261|Lcp1|18826|lymphocyte cytosolic protein 1	AK153061|Lcp1|18826|lymphocyte cytosolic protein 1	AK153082|Lcp1|18826|lymphocyte cytosolic protein 1	AK151542|Lcp1|18826|lymphocyte cytosolic protein 1	AK089922|Lcp1|18826|lymphocyte cytosolic protein 1	AK151720|Lcp1|18826|lymphocyte cytosolic protein 1	AK152668|Lcp1|18826|lymphocyte cytosolic protein 1	AK152891|Lcp1|18826|lymphocyte cytosolic protein 1	AK152902|Lcp1|18826|lymphocyte cytosolic protein 1	AK168062|Lcp1|18826|lymphocyte cytosolic protein 1	AK153206|Lcp1|18826|lymphocyte cytosolic protein 1	AK169833|Lcp1|18826|lymphocyte cytosolic protein 1	AK030806|Lcp1|18826|lymphocyte cytosolic protein 1	AK151155|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr19_-_40345985_40346014	8.02545	CRX.p2	BC004809|Pdlim1|54132|PDZ and LIM domain 1 (elfin)	AK076285|Pdlim1|54132|PDZ and LIM domain 1 (elfin)	AK088089|Pdlim1|54132|PDZ and LIM domain 1 (elfin)	AK158173|Pdlim1|54132|PDZ and LIM domain 1 (elfin)	AK146225|Pdlim1|54132|PDZ and LIM domain 1 (elfin)
mm9_v1_chr10_-_87937335_87937390	7.98637	CRX.p2	AK080245|Chpt1|212862|choline phosphotransferase 1
mm9_v1_chr11_+_95703981_95704031	7.94523	CRX.p2	NM_001038664|Gngt2|14710|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2	AK010554|Gngt2|14710|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2	BC061005|Gngt2|14710|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
mm9_v1_chr9_-_76893529_76893587	7.86019	CRX.p2	AF153366|Tinag|26944|tubulointerstitial nephritis antigen	BC010745|Tinag|26944|tubulointerstitial nephritis antigen	AK008374|Tinag|26944|tubulointerstitial nephritis antigen	NM_012033|Tinag|26944|tubulointerstitial nephritis antigen
mm9_v1_chr8_+_120022149_120022210	7.73371	CRX.p2	AK142173|Plcg2|234779|phospholipase C, gamma 2	AK170430|Plcg2|234779|phospholipase C, gamma 2	BC023877|Plcg2|234779|phospholipase C, gamma 2	NM_172285|Plcg2|234779|phospholipase C, gamma 2	AK151039|Plcg2|234779|phospholipase C, gamma 2
mm9_v1_chr12_+_36719492_36719512	7.71492	CRX.p2	AK007677|Agr2|23795|anterior gradient 2 (Xenopus laevis)	BC013334|Agr2|23795|anterior gradient 2 (Xenopus laevis)	AF044262|Agr2|23795|anterior gradient 2 (Xenopus laevis)	NM_011783|Agr2|23795|anterior gradient 2 (Xenopus laevis)	AB016592|Agr2|23795|anterior gradient 2 (Xenopus laevis)
mm9_v1_chr10_-_53638995_53639134	7.64056	CRX.p2	AK204950|Man1a|17155|mannosidase 1, alpha	AK192972|Man1a|17155|mannosidase 1, alpha	AK191835|Man1a|17155|mannosidase 1, alpha	AK196316|Man1a|17155|mannosidase 1, alpha	AK196883|Man1a|17155|mannosidase 1, alpha	AK201818|Man1a|17155|mannosidase 1, alpha	AK211829|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr7_-_125629996_125630002	7.41278	CRX.p2	AK164927|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK081844|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chr4_+_19207954_19207996	7.30418	CRX.p2	BC100395|Cngb3|30952|cyclic nucleotide gated channel beta 3	AJ243572|Cngb3|30952|cyclic nucleotide gated channel beta 3	NM_013927|Cngb3|30952|cyclic nucleotide gated channel beta 3
mm9_v1_chr2_+_24201033_24201038	7.29723	CRX.p2	S64082|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr7_-_109005707_109005707	7.24728	CRX.p2	M64817|Folr2|14276|folate receptor 2 (fetal)	NM_008035|Folr2|14276|folate receptor 2 (fetal)
mm9_v1_chr11_-_87639611_87639615	7.23359	CRX.p2	BC016212|Lpo|76113|lactoperoxidase	NM_080420|Lpo|76113|lactoperoxidase
mm9_v1_chr5_+_20878459_20878530	7.23325	CRX.p2	AK009500|Fgl2|14190|fibrinogen-like protein 2	BC028893|Fgl2|14190|fibrinogen-like protein 2	NM_008013|Fgl2|14190|fibrinogen-like protein 2	AK036402|Fgl2|14190|fibrinogen-like protein 2	AK036784|Fgl2|14190|fibrinogen-like protein 2
mm9_v1_chr9_+_89949104_89949104	7.19862	CRX.p2	NM_007801|Ctsh|13036|cathepsin H
mm9_v1_chr8_-_95753432_95753442	6.97167	CRX.p2	BC019208|Ces1e|13897|carboxylesterase 1E	S80191|Ces1e|13897|carboxylesterase 1E
mm9_v1_chr6_+_115310883_115310968	6.95386	CRX.p2	U01841|Pparg|19016|peroxisome proliferator activated receptor gamma
mm9_v1_chr17_+_24035687_24035688	6.92813	CRX.p2	BC171996|Dcpp2|630537|demilune cell and parotid protein 2	DQ237937|Dcpp2|630537|demilune cell and parotid protein 2	NM_001039238|Dcpp2|630537|demilune cell and parotid protein 2
mm9_v1_chr19_+_3935169_3935313	6.90517	CRX.p2	NM_001161428|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	NM_019449|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	BC018388|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK030488|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK039526|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK165060|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK155556|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK162535|Unc93b1|54445|unc-93 homolog B1 (C. elegans)
mm9_v1_chr16_-_97985323_97985396	6.86944	CRX.p2	BC057871|Ripk4|72388|receptor-interacting serine-threonine kinase 4	AK145203|Ripk4|72388|receptor-interacting serine-threonine kinase 4	AF302127|Ripk4|72388|receptor-interacting serine-threonine kinase 4	NM_023663|Ripk4|72388|receptor-interacting serine-threonine kinase 4	AK010133|Ripk4|72388|receptor-interacting serine-threonine kinase 4
mm9_v1_chr16_+_44765848_44765938	6.82008	CRX.p2	NM_021325|Cd200r1|57781|CD200 receptor 1	AK154325|Cd200r1|57781|CD200 receptor 1	AK154722|Cd200r1|57781|CD200 receptor 1	BC052682|Cd200r1|57781|CD200 receptor 1	AK089173|Cd200r1|57781|CD200 receptor 1	AK089415|Cd200r1|57781|CD200 receptor 1	AK170735|Cd200r1|57781|CD200 receptor 1	AK171590|Cd200r1|57781|CD200 receptor 1	AK171130|Cd200r1|57781|CD200 receptor 1	AK054236|Cd200r1|57781|CD200 receptor 1
mm9_v1_chr17_-_35325354_35325410	6.772	CRX.p2	U72643|Lst1|16988|leukocyte specific transcript 1	U72644|Lst1|16988|leukocyte specific transcript 1	AF000428|Lst1|16988|leukocyte specific transcript 1	BC086881|Lst1|16988|leukocyte specific transcript 1	M18187|Lst1|16988|leukocyte specific transcript 1	NM_010734|Lst1|16988|leukocyte specific transcript 1	AF000427|Lst1|16988|leukocyte specific transcript 1
mm9_v1_chr11_+_100720664_100720716	6.73081	CRX.p2	NM_011488|Stat5a|20850|signal transducer and activator of transcription 5A	BC013274|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr2_-_163575826_163575924	6.66715	CRX.p2	AF483480|Ada|11486|adenosine deaminase	AF483481|Ada|11486|adenosine deaminase	CT010224|Ada|11486|adenosine deaminase	CT010255|Ada|11486|adenosine deaminase	M10319|Ada|11486|adenosine deaminase	AK075899|Ada|11486|adenosine deaminase	AK167489|Ada|11486|adenosine deaminase	NM_007398|Ada|11486|adenosine deaminase	BC002075|Ada|11486|adenosine deaminase
mm9_v1_chr3_+_97432726_97432760	6.60945	CRX.p2	AK162951|Fmo5|14263|flavin containing monooxygenase 5	NM_001161763|Fmo5|14263|flavin containing monooxygenase 5	AK147040|Fmo5|14263|flavin containing monooxygenase 5	NM_001161765|Fmo5|14263|flavin containing monooxygenase 5	NM_010232|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chr19_+_12535268_12535270	6.58822	CRX.p2	AK030216|Mpeg1|17476|macrophage expressed gene 1	NM_010821|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr11_-_99354417_99354437	6.54935	CRX.p2	BC019972|Krt23|94179|keratin 23	AF102849|Krt23|94179|keratin 23	NM_033373|Krt23|94179|keratin 23	AK036901|Krt23|94179|keratin 23	AK036954|Krt23|94179|keratin 23
mm9_v1_chr19_+_4097894_4098000	6.50244	CRX.p2	AK183323|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr6_-_69765093_69765126	6.46664	CRX.p2	
mm9_v1_chr3_+_95330700_95330810	6.36677	CRX.p2	AK028366|Ctss|13040|cathepsin S	NM_021281|Ctss|13040|cathepsin S	AJ002386|Ctss|13040|cathepsin S	AK152191|Ctss|13040|cathepsin S	AF038546|Ctss|13040|cathepsin S	AK150274|Ctss|13040|cathepsin S	BC011104|Ctss|13040|cathepsin S	BC002125|Ctss|13040|cathepsin S
mm9_v1_chr7_+_35905996_35906277	6.33974	CRX.p2	BC106174|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	AK160443|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha
mm9_v1_chr7_+_25247448_25247518	6.3142	CRX.p2	AK002580|Plaur|18793|plasminogen activator, urokinase receptor	AK144796|Plaur|18793|plasminogen activator, urokinase receptor	AK154141|Plaur|18793|plasminogen activator, urokinase receptor	AK131951|Plaur|18793|plasminogen activator, urokinase receptor	AK146827|Plaur|18793|plasminogen activator, urokinase receptor	AK155351|Plaur|18793|plasminogen activator, urokinase receptor	BC010309|Plaur|18793|plasminogen activator, urokinase receptor	NM_011113|Plaur|18793|plasminogen activator, urokinase receptor	X62700|Plaur|18793|plasminogen activator, urokinase receptor	X62701|Plaur|18793|plasminogen activator, urokinase receptor
mm9_v1_chr2_-_25052245_25052332	6.26117	CRX.p2	BC013092|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK155540|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	NM_146115|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene
mm9_v1_chr2_+_163332550_163332692	6.23071	CRX.p2	AF015275|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608819|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608820|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608821|Hnf4a|15378|hepatic nuclear factor 4, alpha	EF193391|Hnf4a|15378|hepatic nuclear factor 4, alpha
mm9_v1_chr1_+_58859345_58859473	6.19686	CRX.p2	NM_001080126|Casp8|12370|caspase 8	AK153340|Casp8|12370|caspase 8
mm9_v1_chr7_-_20262106_20262119	6.17646	CRX.p2	AK146468|Apoc2|11813|apolipoprotein C-II	Z15090|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr11_+_20125239_20125296	6.17388	CRX.p2	AK078671|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr11_+_101309725_101309821	6.15002	CRX.p2	AK131884|Ifi35|70110|interferon-induced protein 35	NM_027320|Ifi35|70110|interferon-induced protein 35	AK008161|Ifi35|70110|interferon-induced protein 35	BC008158|Ifi35|70110|interferon-induced protein 35
mm9_v1_chr7_+_51368048_51368052	6.14871	CRX.p2	BC106155|Klk1b22|13646|kallikrein 1-related peptidase b22	NM_010114|Klk1b22|13646|kallikrein 1-related peptidase b22
mm9_v1_chr7_+_135052004_135052051	6.11242	CRX.p2	
mm9_v1_chr3_-_113126814_113126969	6.07608	CRX.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr6_+_115311078_115311238	6.0292	CRX.p2	U01664|Pparg|19016|peroxisome proliferator activated receptor gamma	NM_001127330|Pparg|19016|peroxisome proliferator activated receptor gamma
mm9_v1_chr6_+_41304103_41304177	6.02149	CRX.p2	BC138698|Try10|436522|trypsin 10	BC146017|Try10|436522|trypsin 10	NM_001038996|Try10|436522|trypsin 10	AK133516|Try10|436522|trypsin 10
mm9_v1_chr18_-_84851298_84851466	6.00568	CRX.p2	AK131124|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK149751|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152729|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK153040|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK152442|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)	AK159129|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)
mm9_v1_chr19_-_41289045_41289143	6.0009	CRX.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr11_-_120421805_120421818	5.98393	CRX.p2	AK196256|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK201336|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr6_-_115542515_115542614	5.96169	CRX.p2	AK028760|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene	AK011120|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene	NM_001101431|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene
mm9_v1_chr8_-_95753501_95753517	5.93931	CRX.p2	AK144549|Ces1e|13897|carboxylesterase 1E	NM_133660|Ces1e|13897|carboxylesterase 1E
mm9_v1_chr19_+_12535536_12535672	5.91179	CRX.p2	L20315|Mpeg1|17476|macrophage expressed gene 1	BC129843|Mpeg1|17476|macrophage expressed gene 1	BC129844|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr4_+_135750500_135750521	5.89936	CRX.p2	AK033797|E2f2|242705|E2F transcription factor 2
mm9_v1_chr12_-_71332398_71332474	5.87207	CRX.p2	AK149491|Pygl|110095|liver glycogen phosphorylase
mm9_v1_chr15_-_66644127_66644154	5.84419	CRX.p2	BC032922|Sla|20491|src-like adaptor	NM_009192|Sla|20491|src-like adaptor
mm9_v1_chr19_+_4231881_4231919	5.82064	CRX.p2	NM_027196|Pold4|69745|polymerase (DNA-directed), delta 4
mm9_v1_chr9_-_114299732_114299829	5.77406	CRX.p2	BC049890|Crtap|56693|cartilage associated protein	AK047506|Crtap|56693|cartilage associated protein	AJ006469|Crtap|56693|cartilage associated protein	AK017797|Crtap|56693|cartilage associated protein	NM_019922|Crtap|56693|cartilage associated protein
mm9_v1_chr14_-_52393218_52393266	5.76164	CRX.p2	BC132444|Ang4|219033|angiogenin, ribonuclease A family, member 4	BC132448|Ang4|219033|angiogenin, ribonuclease A family, member 4	AK136415|Ang4|219033|angiogenin, ribonuclease A family, member 4	AK165799|Ang4|219033|angiogenin, ribonuclease A family, member 4	AY219870|Ang4|219033|angiogenin, ribonuclease A family, member 4	NM_177544|Ang4|219033|angiogenin, ribonuclease A family, member 4
mm9_v1_chr11_+_97660946_97661134	5.75693	CRX.p2	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr4_+_62626582_62626639	5.67669	CRX.p2	NM_028326|Zfp618|72701|zinc fingerprotein 618	AK012848|Zfp618|72701|zinc fingerprotein 618
mm9_v1_chr11_-_3817574_3817712	5.61589	CRX.p2	AK202567|Tcn2|21452|transcobalamin 2
mm9_v1_chr10_-_82800561_82800561	5.59883	CRX.p2	AK038549|Slc41a2|338365|solute carrier family 41, member 2	NM_177388|Slc41a2|338365|solute carrier family 41, member 2
mm9_v1_chr7_-_52317021_52317119	5.58007	CRX.p2	BC025098|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2	NM_022999|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm9_v1_chr10_+_126602182_126602286	5.57562	CRX.p2	AK144484|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC057199|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	NM_008080|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC019969|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr19_+_4231936_4231998	5.50448	CRX.p2	AK010477|Pold4|69745|polymerase (DNA-directed), delta 4	BC028520|Pold4|69745|polymerase (DNA-directed), delta 4	AF515709|Pold4|69745|polymerase (DNA-directed), delta 4
mm9_v1_chr1_-_87500465_87500465	5.49269	CRX.p2	NM_175397|Sp110|109032|Sp110 nuclear body protein
mm9_v1_chr7_-_52409783_52409953	5.41006	CRX.p2	AK209303|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK220200|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK169346|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK030673|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144967|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK151691|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	BC013548|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	NM_145954|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK144995|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK161198|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK170276|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1	AK164374|Aldh16a1|69748|aldehyde dehydrogenase 16 family, member A1
mm9_v1_chr16_+_57353389_57353389	5.39415	CRX.p2	AK146705|Filip1l|78749|filamin A interacting protein 1-like	NM_001040397|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr13_+_74777303_74777332	5.35846	CRX.p2	BC046610|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK159406|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK030329|Erap1|80898|endoplasmic reticulum aminopeptidase 1	NM_030711|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK029841|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK036559|Erap1|80898|endoplasmic reticulum aminopeptidase 1
mm9_v1_chr11_+_106612525_106612642	5.34615	CRX.p2	BC139224|Gm885|380732|predicted gene 885	BC139225|Gm885|380732|predicted gene 885	BC145580|Gm885|380732|predicted gene 885	BC145582|Gm885|380732|predicted gene 885	AK169925|Gm885|380732|predicted gene 885	AB542953|Gm885|380732|predicted gene 885	AK136488|Gm885|380732|predicted gene 885	AK137500|Gm885|380732|predicted gene 885	AK171381|Gm885|380732|predicted gene 885	NM_001033435|Gm885|380732|predicted gene 885	AK151814|Gm885|380732|predicted gene 885	AK170947|Gm885|380732|predicted gene 885	AK153506|Gm885|380732|predicted gene 885
mm9_v1_chr15_-_76447278_76447331	5.3343	CRX.p2	BC023498|Slc39a4|72027|solute carrier family 39 (zinc transporter), member 4	NM_028064|Slc39a4|72027|solute carrier family 39 (zinc transporter), member 4	AK147107|Slc39a4|72027|solute carrier family 39 (zinc transporter), member 4	AK005535|Slc39a4|72027|solute carrier family 39 (zinc transporter), member 4	AK146977|Slc39a4|72027|solute carrier family 39 (zinc transporter), member 4
mm9_v1_chr1_-_89291303_89291307	5.26408	CRX.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr11_-_70273453_70273485	5.24914	CRX.p2	AK028875|Cxcl16|66102|chemokine (C-X-C motif) ligand 16	NM_023158|Cxcl16|66102|chemokine (C-X-C motif) ligand 16
mm9_v1_chr3_+_137949734_137949755	5.22805	CRX.p2	M22611|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr17_-_57387033_57387124	5.20069	CRX.p2	AK047364|Gpr108|78308|G protein-coupled receptor 108	AF376726|Gpr108|78308|G protein-coupled receptor 108	AX775897|Gpr108|78308|G protein-coupled receptor 108	AK082797|Gpr108|78308|G protein-coupled receptor 108	BC016104|Gpr108|78308|G protein-coupled receptor 108	NM_030084|Gpr108|78308|G protein-coupled receptor 108	AK159313|Gpr108|78308|G protein-coupled receptor 108	AK170948|Gpr108|78308|G protein-coupled receptor 108	AK171030|Gpr108|78308|G protein-coupled receptor 108	AX775895|Gpr108|78308|G protein-coupled receptor 108
mm9_v1_chr6_-_69367406_69367460	5.1938	CRX.p2	DQ372799|Igkv4-68|384515|immunoglobulin kappa variable 4-68
mm9_v1_chr12_+_99506844_99506881	5.16208	CRX.p2	AK134113|Gpr65|14744|G-protein coupled receptor 65	NM_008152|Gpr65|14744|G-protein coupled receptor 65	U39827|Gpr65|14744|G-protein coupled receptor 65	AK142853|Gpr65|14744|G-protein coupled receptor 65
mm9_v1_chr6_-_3349415_3349463	5.11603	CRX.p2	AK172649|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr5_+_145888588_145888809	5.089	CRX.p2	AK192837|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr2_-_84490666_84490763	5.05484	CRX.p2	NM_001085453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC046589|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr6_-_55124983_55125038	5.01604	CRX.p2	M88694|Inmt|21743|indolethylamine N-methyltransferase	NM_009349|Inmt|21743|indolethylamine N-methyltransferase	BC013518|Inmt|21743|indolethylamine N-methyltransferase	AK013010|Inmt|21743|indolethylamine N-methyltransferase	AK002281|Inmt|21743|indolethylamine N-methyltransferase
mm9_v1_chr6_+_70648433_70648461	4.97851	CRX.p2	M83099|Igkv3-2|626583|immunoglobulin kappa variable 3-2
mm9_v1_chr6_+_68375560_68375603	4.9427	CRX.p2	M19911|Igkv16-104|381778|immunoglobulin kappa variable 16-104	X14621|Igkv16-104|381778|immunoglobulin kappa variable 16-104
mm9_v1_chr3_-_96097855_96097923	4.897	CRX.p2	BC025535|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143154|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143155|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143156|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143157|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143158|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143159|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143160|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143161|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143162|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143163|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143164|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143165|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143166|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143167|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143168|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143169|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143170|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143171|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143172|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143173|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143174|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143175|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143176|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143177|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143178|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143179|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143180|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143181|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143186|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143187|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143188|Fcgr1|14129|Fc receptor, IgG, high affinity I	X70980|Fcgr1|14129|Fc receptor, IgG, high affinity I	M31314|Fcgr1|14129|Fc receptor, IgG, high affinity I	AK033874|Fcgr1|14129|Fc receptor, IgG, high affinity I	NM_010186|Fcgr1|14129|Fc receptor, IgG, high affinity I
mm9_v1_chr7_-_135073600_135073612	4.85496	CRX.p2	BC003851|Prss8|76560|protease, serine, 8 (prostasin)	AB038244|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chrX_+_136343083_136343199	4.83797	CRX.p2	AK004990|Cldn2|12738|claudin 2	BC015252|Cldn2|12738|claudin 2	AF072128|Cldn2|12738|claudin 2
mm9_v1_chr7_-_135073577_135073594	4.80903	CRX.p2	AK078696|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr11_+_78734288_78734472	4.73652	CRX.p2	M87039|Nos2|18126|nitric oxide synthase 2, inducible	M92649|Nos2|18126|nitric oxide synthase 2, inducible	M84373|Nos2|18126|nitric oxide synthase 2, inducible	NM_010927|Nos2|18126|nitric oxide synthase 2, inducible	AF065919|Nos2|18126|nitric oxide synthase 2, inducible	AF065920|Nos2|18126|nitric oxide synthase 2, inducible	AF065921|Nos2|18126|nitric oxide synthase 2, inducible	BC062378|Nos2|18126|nitric oxide synthase 2, inducible	U43428|Nos2|18126|nitric oxide synthase 2, inducible
mm9_v1_chr6_+_115372083_115372128	4.70476	CRX.p2	AY208183|Pparg|19016|peroxisome proliferator activated receptor gamma	AY208184|Pparg|19016|peroxisome proliferator activated receptor gamma	AY243585|Pparg|19016|peroxisome proliferator activated receptor gamma	BC021798|Pparg|19016|peroxisome proliferator activated receptor gamma	NM_011146|Pparg|19016|peroxisome proliferator activated receptor gamma	U09138|Pparg|19016|peroxisome proliferator activated receptor gamma	EF062476|Pparg|19016|peroxisome proliferator activated receptor gamma	CT010340|Pparg|19016|peroxisome proliferator activated receptor gamma
mm9_v1_chr11_+_82878590_82878700	4.67675	CRX.p2	AF099973|Slfn2|20556|schlafen 2	NM_011408|Slfn2|20556|schlafen 2	BC138749|Slfn2|20556|schlafen 2	BC138750|Slfn2|20556|schlafen 2
mm9_v1_chr6_+_17699145_17699592	4.65709	CRX.p2	AK079107|St7|64213|suppression of tumorigenicity 7	AK132103|St7|64213|suppression of tumorigenicity 7	AK151550|St7|64213|suppression of tumorigenicity 7	NM_001083315|St7|64213|suppression of tumorigenicity 7	NM_022332|St7|64213|suppression of tumorigenicity 7	BC108418|St7|64213|suppression of tumorigenicity 7	AF234884|St7|64213|suppression of tumorigenicity 7	AF234885|St7|64213|suppression of tumorigenicity 7	AY007794|St7|64213|suppression of tumorigenicity 7	AY007795|St7|64213|suppression of tumorigenicity 7	AK036248|St7|64213|suppression of tumorigenicity 7	BC060630|St7|64213|suppression of tumorigenicity 7	BC051429|St7|64213|suppression of tumorigenicity 7	AY551821|St7|64213|suppression of tumorigenicity 7	AY551822|St7|64213|suppression of tumorigenicity 7	CT010245|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr11_-_3427914_3427958	4.63135	CRX.p2	AK009426|Smtn|29856|smoothelin
mm9_v1_chr18_-_84849981_84849981	4.62773	CRX.p2	AK168856|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)
mm9_v1_chr2_-_163470841_163470868	4.60757	CRX.p2	BC029026|Serinc3|26943|serine incorporator 3	BC029980|Serinc3|26943|serine incorporator 3	AK031101|Serinc3|26943|serine incorporator 3
mm9_v1_chr5_-_17394564_17394590	4.57865	CRX.p2	AK128908|Cd36|12491|CD36 antigen
mm9_v1_chr7_+_74792295_74792398	4.54545	CRX.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr2_-_103105045_103105100	4.48793	CRX.p2	AK162509|Ehf|13661|ets homologous factor
mm9_v1_chr2_+_24831667_24831768	4.43668	CRX.p2	AK038505|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC141365|Pnpla7|241274|patatin-like phospholipase domain containing 7	BC141366|Pnpla7|241274|patatin-like phospholipase domain containing 7
mm9_v1_chr5_+_34868420_34868522	4.39158	CRX.p2	AK155898|Sh3bp2|24055|SH3-domain binding protein 2	NM_011893|Sh3bp2|24055|SH3-domain binding protein 2	AK155103|Sh3bp2|24055|SH3-domain binding protein 2	BC010198|Sh3bp2|24055|SH3-domain binding protein 2	L14543|Sh3bp2|24055|SH3-domain binding protein 2	AK089455|Sh3bp2|24055|SH3-domain binding protein 2
mm9_v1_chr2_+_24200890_24200907	4.38868	CRX.p2	AK155641|Il1rn|16181|interleukin 1 receptor antagonist	NM_001039701|Il1rn|16181|interleukin 1 receptor antagonist	AK155888|Il1rn|16181|interleukin 1 receptor antagonist	AK157157|Il1rn|16181|interleukin 1 receptor antagonist	AK171385|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr4_+_130469048_130469149	4.38625	CRX.p2	BC158032|Laptm5|16792|lysosomal-associated protein transmembrane 5
mm9_v1_chr10_+_87322774_87322795	4.36397	CRX.p2	AK038119|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr10_+_88348725_88348907	4.33838	CRX.p2	AK136457|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	AY484428|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	NM_145423|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	BC017691|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	AK039927|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8
mm9_v1_chr13_+_54802823_54802823	4.32598	CRX.p2	AK144400|Cdhr2|268663|cadherin-related family member 2	NM_001033364|Cdhr2|268663|cadherin-related family member 2
mm9_v1_chr5_+_64203602_64203733	4.28851	CRX.p2	AK050792|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	AK002869|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	NM_029554|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene
mm9_v1_chr1_+_87546558_87546676	4.24934	CRX.p2	AK042095|Sp100|20684|nuclear antigen Sp100	AK080004|Sp100|20684|nuclear antigen Sp100	AK152348|Sp100|20684|nuclear antigen Sp100	U83630|Sp100|20684|nuclear antigen Sp100	AK146054|Sp100|20684|nuclear antigen Sp100	AK153487|Sp100|20684|nuclear antigen Sp100	BC069183|Sp100|20684|nuclear antigen Sp100	AK083304|Sp100|20684|nuclear antigen Sp100	NM_013673|Sp100|20684|nuclear antigen Sp100	CT010199|Sp100|20684|nuclear antigen Sp100	U83636|Sp100|20684|nuclear antigen Sp100
mm9_v1_chr2_-_25052129_25052179	4.24819	CRX.p2	AK154508|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK043559|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK082899|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK172142|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK171551|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene
mm9_v1_chr18_-_35900005_35900208	4.18362	CRX.p2	DQ910493|Tmem173|72512|transmembrane protein 173	AK153868|Tmem173|72512|transmembrane protein 173	AK146284|Tmem173|72512|transmembrane protein 173	AX775911|Tmem173|72512|transmembrane protein 173	AK077788|Tmem173|72512|transmembrane protein 173	AK157370|Tmem173|72512|transmembrane protein 173	AK158458|Tmem173|72512|transmembrane protein 173	BC046640|Tmem173|72512|transmembrane protein 173	AK171612|Tmem173|72512|transmembrane protein 173	AK012006|Tmem173|72512|transmembrane protein 173	AK171065|Tmem173|72512|transmembrane protein 173	AK171203|Tmem173|72512|transmembrane protein 173	AK089405|Tmem173|72512|transmembrane protein 173	AK170724|Tmem173|72512|transmembrane protein 173	NM_028261|Tmem173|72512|transmembrane protein 173
mm9_v1_chr7_+_26449356_26449419	4.18144	CRX.p2	AK189469|Exosc5|27998|exosome component 5
mm9_v1_chr1_-_140071818_140071883	4.17317	CRX.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr15_-_78685925_78685959	4.14026	CRX.p2	BC027504|Lgals2|107753|lectin, galactose-binding, soluble 2	AK007364|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008607|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008423|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008636|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008648|Lgals2|107753|lectin, galactose-binding, soluble 2	NM_025622|Lgals2|107753|lectin, galactose-binding, soluble 2
mm9_v1_chr19_+_29326204_29326359	4.13956	CRX.p2	NM_001048177|Jak2|16452|Janus kinase 2	NM_008413|Jak2|16452|Janus kinase 2	AK087255|Jak2|16452|Janus kinase 2
mm9_v1_chr1_+_166726827_166726862	4.13924	CRX.p2	BC046420|Dpt|56429|dermatopontin	AF143374|Dpt|56429|dermatopontin	NM_019759|Dpt|56429|dermatopontin
mm9_v1_chr2_-_84490827_84490896	4.1295	CRX.p2	BC054544|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC043108|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK161790|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK164485|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK168453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085448|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085449|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085450|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_007615|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr10_+_7445867_7445883	4.12469	CRX.p2	BC009136|Katna1|23924|katanin p60 (ATPase-containing) subunit A1
mm9_v1_chr11_-_99489523_99489552	4.11942	CRX.p2	BC147087|Krtap4-1|665891|keratin associated protein 4-1	BC147088|Krtap4-1|665891|keratin associated protein 4-1	AK137752|Krtap4-1|665891|keratin associated protein 4-1	NM_001048196|Krtap4-1|665891|keratin associated protein 4-1
mm9_v1_chr1_-_175805812_175805992	4.08897	CRX.p2	AK087931|Mndal|100040462|myeloid nuclear differentiation antigen like	FJ594740|Mndal|100040462|myeloid nuclear differentiation antigen like
mm9_v1_chr11_-_106128935_106128945	4.06305	CRX.p2	BC005732|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	NM_031878|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm9_v1_chr13_-_101086551_101086570	4.01645	CRX.p2	BC116347|Naip6|17952|NLR family, apoptosis inhibitory protein 6	BC141346|Naip6|17952|NLR family, apoptosis inhibitory protein 6	AF381772|Naip6|17952|NLR family, apoptosis inhibitory protein 6	NM_010871|Naip6|17952|NLR family, apoptosis inhibitory protein 6
mm9_v1_chr4_-_136965705_136965705	4.00538	CRX.p2	NM_001126318|Gm13011|242711|predicted gene 13011
mm9_v1_chr9_-_45012097_45012172	3.99126	CRX.p2	BC021368|Tmprss4|214523|transmembrane protease, serine 4	AY043240|Tmprss4|214523|transmembrane protease, serine 4	NM_145403|Tmprss4|214523|transmembrane protease, serine 4	AK078890|Tmprss4|214523|transmembrane protease, serine 4
mm9_v1_chr16_+_32430986_32431114	3.98587	CRX.p2	AK044585|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	NM_009981|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	L28956|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	Z12302|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	AK076050|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	NM_001163159|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform
mm9_v1_chr2_-_169968174_169968177	3.96694	CRX.p2	AK139547|Zfp217|228913|zinc finger protein 217	NM_001159683|Zfp217|228913|zinc finger protein 217	AK163381|Zfp217|228913|zinc finger protein 217
mm9_v1_chr11_-_99354449_99354450	3.91916	CRX.p2	BC003472|Krt23|94179|keratin 23	AK145247|Krt23|94179|keratin 23
mm9_v1_chr15_-_103181862_103181866	3.88135	CRX.p2	X15203|Itga5|16402|integrin alpha 5 (fibronectin receptor alpha)
mm9_v1_chr7_+_117365214_117365324	3.86267	CRX.p2	NM_009302|Swap70|20947|SWA-70 protein	AK146773|Swap70|20947|SWA-70 protein	AK045295|Swap70|20947|SWA-70 protein	AK041505|Swap70|20947|SWA-70 protein	AK019882|Swap70|20947|SWA-70 protein	BC065136|Swap70|20947|SWA-70 protein	AK172990|Swap70|20947|SWA-70 protein	AF053974|Swap70|20947|SWA-70 protein
mm9_v1_chr2_+_155576943_155577133	3.85935	CRX.p2	NM_011171|Procr|19124|protein C receptor, endothelial	AK167302|Procr|19124|protein C receptor, endothelial	X63748|Procr|19124|protein C receptor, endothelial	L39017|Procr|19124|protein C receptor, endothelial	BC028755|Procr|19124|protein C receptor, endothelial	AK136541|Procr|19124|protein C receptor, endothelial	CT010175|Procr|19124|protein C receptor, endothelial
mm9_v1_chr9_-_21722533_21722626	3.8551	CRX.p2	BC010779|Rab3d|19340|RAB3D, member RAS oncogene family	AF263365|Rab3d|19340|RAB3D, member RAS oncogene family	AK078462|Rab3d|19340|RAB3D, member RAS oncogene family	AK169369|Rab3d|19340|RAB3D, member RAS oncogene family	NM_031874|Rab3d|19340|RAB3D, member RAS oncogene family	BC020010|Rab3d|19340|RAB3D, member RAS oncogene family	AK048395|Rab3d|19340|RAB3D, member RAS oncogene family
mm9_v1_chr9_-_70269326_70269397	3.82798	CRX.p2	AK013312|Ccnb2|12442|cyclin B2	X66032|Ccnb2|12442|cyclin B2	AK076122|Ccnb2|12442|cyclin B2	NM_007630|Ccnb2|12442|cyclin B2
mm9_v1_chr5_-_17355533_17355611	3.8237	CRX.p2	AK172162|Cd36|12491|CD36 antigen	BC010262|Cd36|12491|CD36 antigen	AK150648|Cd36|12491|CD36 antigen	NM_001159556|Cd36|12491|CD36 antigen	NM_001159557|Cd36|12491|CD36 antigen
mm9_v1_chr19_+_5878465_5878648	3.81799	CRX.p2	NM_134154|Slc25a45|107375|solute carrier family 25, member 45	BC037680|Slc25a45|107375|solute carrier family 25, member 45	BC022156|Slc25a45|107375|solute carrier family 25, member 45
mm9_v1_chr6_+_137359231_137359310	3.81455	CRX.p2	NM_001164402|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	NM_001164403|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	U37465|Ptpro|19277|protein tyrosine phosphatase, receptor type, O	U37466|Ptpro|19277|protein tyrosine phosphatase, receptor type, O
mm9_v1_chr19_-_41288465_41288553	3.80663	CRX.p2	AK077835|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr16_+_48816968_48817099	3.7568	CRX.p2	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr6_+_34304098_34304193	3.75283	CRX.p2	NM_008012|Akr1b8|14187|aldo-keto reductase family 1, member B8	U04204|Akr1b8|14187|aldo-keto reductase family 1, member B8	BC005789|Akr1b8|14187|aldo-keto reductase family 1, member B8
mm9_v1_chr7_-_3849680_3849726	3.7513	CRX.p2	U96686|Pira5|18728|paired-Ig-like receptor A5	AF055896|Pira11|18724|paired-Ig-like receptor A11	AF041036|Pira11|18724|paired-Ig-like receptor A11	BC150155|Pira11|18724|paired-Ig-like receptor A11	NM_001166672|Gm14548|100038909|predicted gene 14548	NM_011091|Pira4|18727|paired-Ig-like receptor A4	U96685|Pira4|18727|paired-Ig-like receptor A4	BC103528|Pira11|18724|paired-Ig-like receptor A11	BC103529|Pira11|18724|paired-Ig-like receptor A11	BC139803|Pira11|18724|paired-Ig-like receptor A11	NM_011088|Pira11|18724|paired-Ig-like receptor A11	AK165650|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011094|Pira7|18730|paired-Ig-like receptor A7	U96688|Pira7|18730|paired-Ig-like receptor A7	BC150712|Pira11|18724|paired-Ig-like receptor A11
mm9_v1_chr13_-_64468380_64468393	3.71937	CRX.p2	Y18465|Ctsl|13039|cathepsin L
mm9_v1_chr8_+_34681015_34681015	3.71735	CRX.p2	AF285589|Tex15|104271|testis expressed gene 15	NM_031374|Tex15|104271|testis expressed gene 15
mm9_v1_chr4_-_104548965_104549005	3.69801	CRX.p2	AB077296|C8a|230558|complement component 8, alpha polypeptide	AB077297|C8a|230558|complement component 8, alpha polypeptide	AB077298|C8a|230558|complement component 8, alpha polypeptide	BC027748|C8a|230558|complement component 8, alpha polypeptide	AK090245|C8a|230558|complement component 8, alpha polypeptide	AB077295|C8a|230558|complement component 8, alpha polypeptide	NM_146148|C8a|230558|complement component 8, alpha polypeptide
mm9_v1_chr16_+_35938555_35938555	3.68628	CRX.p2	BC070466|Parp9|80285|poly (ADP-ribose) polymerase family, member 9	NM_030253|Parp9|80285|poly (ADP-ribose) polymerase family, member 9
mm9_v1_chr5_-_104406406_104406437	3.68556	CRX.p2	NM_001163486|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13	NM_198030|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13
mm9_v1_chr7_-_135073508_135073550	3.64501	CRX.p2	AK010640|Prss8|76560|protease, serine, 8 (prostasin)	AF188613|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr7_-_3671918_3672003	3.62199	CRX.p2	U96690|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148879|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U83172|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148878|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	BC028756|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148880|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK161081|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK142375|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK170618|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK152232|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK153116|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK170720|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96692|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK165255|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011095|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96693|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
mm9_v1_chrX_+_106392094_106392130	3.61886	CRX.p2	NM_001037917|Gm6377|622976|predicted gene 6377	AK080287|Gm6377|622976|predicted gene 6377	AK138683|Gm6377|622976|predicted gene 6377	BC147431|Gm6377|622976|predicted gene 6377	BC147432|Gm6377|622976|predicted gene 6377
mm9_v1_chr7_-_91827857_91827907	3.61644	CRX.p2	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr7_+_112789644_112789816	3.61474	CRX.p2	
mm9_v1_chr2_+_122090555_122090603	3.61343	CRX.p2	AK216108|Sord|20322|sorbitol dehydrogenase
mm9_v1_chrX_+_9829439_9829558	3.58539	CRX.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chr4_-_49694854_49694888	3.57163	CRX.p2	AK029998|Ppp3r2|19059|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)	NM_001004025|Ppp3r2|19059|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)	AK161263|Ppp3r2|19059|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)	S43865|Ppp3r2|19059|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)	AK132760|Ppp3r2|19059|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)	BC100409|Ppp3r2|19059|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II)
mm9_v1_chr11_+_87569075_87569079	3.56579	CRX.p2	AK020764|A430104N18Rik|78591|RIKEN cDNA A430104N18 gene
mm9_v1_chr7_-_3820753_3820811	3.53247	CRX.p2	AK137448|Gm10693|675749|predicted pseudogene 10693
mm9_v1_chr6_-_3349470_3349570	3.5282	CRX.p2	BC079894|Samd9l|209086|sterile alpha motif domain containing 9-like	AK052535|Samd9l|209086|sterile alpha motif domain containing 9-like	NM_010156|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr17_+_34729159_34729288	3.50984	CRX.p2	AK159623|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC010287|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC062147|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr17_+_25015708_25015726	3.50689	CRX.p2	BC106111|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit	AK004926|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit	NM_008340|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit	BC129875|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit	BC129876|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit
mm9_v1_chr10_+_51210768_51210823	3.4643	CRX.p2	AK089372|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK155750|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK089334|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170615|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	NM_013532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC006591|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05264|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	U05266|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	BC099532|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4	AK170368|Lilrb4|14728|leukocyte immunoglobulin-like receptor, subfamily B, member 4
mm9_v1_chr6_+_18120686_18120770	3.43592	CRX.p2	M60493|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	M69298|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	NM_021050|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	AK033621|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog
mm9_v1_chr14_+_27813547_27813547	3.4316	CRX.p2	NM_010420|Hesx1|15209|homeobox gene expressed in ES cells	U40720|Hesx1|15209|homeobox gene expressed in ES cells
mm9_v1_chr6_+_48794000_48794090	3.42991	CRX.p2	AK180847|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr19_-_34736879_34736908	3.41037	CRX.p2	AK090072|Gm14446|667373|predicted gene 14446
mm9_v1_chr14_-_17082321_17082321	3.40802	CRX.p2	AK083617|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	NM_027695|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial
mm9_v1_chr13_+_54802831_54802894	3.40611	CRX.p2	BC141301|Cdhr2|268663|cadherin-related family member 2	BC145624|Cdhr2|268663|cadherin-related family member 2
mm9_v1_chr1_-_121545158_121545240	3.3984	CRX.p2	BC003937|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr17_-_72102224_72102233	3.39529	CRX.p2	BC046516|BC027072|225004|cDNA sequence BC027072	NM_146082|BC027072|225004|cDNA sequence BC027072	BC060373|BC027072|225004|cDNA sequence BC027072
mm9_v1_chr9_+_124036265_124036352	3.3866	CRX.p2	AK154595|Ccr5|12774|chemokine (C-C motif) receptor 5	NM_009917|Ccr5|12774|chemokine (C-C motif) receptor 5	AK141906|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155632|Ccr5|12774|chemokine (C-C motif) receptor 5	AK170303|Ccr5|12774|chemokine (C-C motif) receptor 5	D83648|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155628|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155867|Ccr5|12774|chemokine (C-C motif) receptor 5	X94151|Ccr5|12774|chemokine (C-C motif) receptor 5	BC105643|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103574|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103586|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103587|Ccr5|12774|chemokine (C-C motif) receptor 5	U47036|Ccr5|12774|chemokine (C-C motif) receptor 5
mm9_v1_chr7_-_134158053_134158131	3.38534	CRX.p2	BC006709|Mvp|78388|major vault protein	AK167899|Mvp|78388|major vault protein	AK168100|Mvp|78388|major vault protein	AK152534|Mvp|78388|major vault protein	AK088046|Mvp|78388|major vault protein	AF210456|Mvp|78388|major vault protein	NM_080638|Mvp|78388|major vault protein
mm9_v1_chr1_+_180117547_180117811	3.38121	CRX.p2	AK029574|Pppde1|78825|PPPDE peptidase domain containing 1	NM_024282|Pppde1|78825|PPPDE peptidase domain containing 1	AK020014|Pppde1|78825|PPPDE peptidase domain containing 1	AK049579|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr4_+_118104028_118104093	3.37163	CRX.p2	AK195478|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
mm9_v1_chr17_+_25015186_25015209	3.36689	CRX.p2	AK220290|Igfals|16005|insulin-like growth factor binding protein, acid labile subunit
mm9_v1_chr11_+_101191918_101191919	3.36466	CRX.p2	AF054831|Aoc3|11754|amine oxidase, copper containing 3	NM_009675|Aoc3|11754|amine oxidase, copper containing 3
mm9_v1_chr5_-_115140869_115140951	3.36274	CRX.p2	AF209703|Gltp|56356|glycolipid transfer protein	BC053729|Gltp|56356|glycolipid transfer protein	AK157313|Gltp|56356|glycolipid transfer protein	BC016584|Gltp|56356|glycolipid transfer protein	NM_019821|Gltp|56356|glycolipid transfer protein
mm9_v1_chr1_+_94869695_94869699	3.35716	CRX.p2	NM_001104529|Gpr35|64095|G protein-coupled receptor 35	AK036503|Gpr35|64095|G protein-coupled receptor 35	AK160972|Gpr35|64095|G protein-coupled receptor 35
mm9_v1_chr2_+_103252254_103252254	3.35608	CRX.p2	AK076331|Elf5|13711|E74-like factor 5	NM_001145813|Elf5|13711|E74-like factor 5
mm9_v1_chr6_+_122463663_122463700	3.35565	CRX.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr1_+_45368382_45368399	3.32474	CRX.p2	NM_009930|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr12_+_25393083_25393272	3.32049	CRX.p2	BC085136|Rrm2|20135|ribonucleotide reductase M2	NM_009104|Rrm2|20135|ribonucleotide reductase M2	AK142027|Rrm2|20135|ribonucleotide reductase M2	AK161643|Rrm2|20135|ribonucleotide reductase M2	AK167204|Rrm2|20135|ribonucleotide reductase M2	AK168117|Rrm2|20135|ribonucleotide reductase M2	AK168994|Rrm2|20135|ribonucleotide reductase M2	AK168205|Rrm2|20135|ribonucleotide reductase M2	M14223|Rrm2|20135|ribonucleotide reductase M2	AK088907|Rrm2|20135|ribonucleotide reductase M2	AK167078|Rrm2|20135|ribonucleotide reductase M2	AK147111|Rrm2|20135|ribonucleotide reductase M2	AK188716|Rrm2|20135|ribonucleotide reductase M2	AK189805|Rrm2|20135|ribonucleotide reductase M2
mm9_v1_chr2_+_155576833_155576871	3.32031	CRX.p2	AK143719|Procr|19124|protein C receptor, endothelial
mm9_v1_chr6_+_15670660_15670769	3.31299	CRX.p2	AK165016|Mdfic|16543|MyoD family inhibitor domain containing	NM_175088|Mdfic|16543|MyoD family inhibitor domain containing	AK086117|Mdfic|16543|MyoD family inhibitor domain containing	AK172522|Mdfic|16543|MyoD family inhibitor domain containing	AK166462|Mdfic|16543|MyoD family inhibitor domain containing	AK080178|Mdfic|16543|MyoD family inhibitor domain containing	AK134050|Mdfic|16543|MyoD family inhibitor domain containing	AK048821|Mdfic|16543|MyoD family inhibitor domain containing
mm9_v1_chr2_+_164388211_164388224	3.29767	CRX.p2	AK005519|Wfdc2|67701|WAP four-disulfide core domain 2	NM_026323|Wfdc2|67701|WAP four-disulfide core domain 2	AF334269|Wfdc2|67701|WAP four-disulfide core domain 2	BC099427|Wfdc2|67701|WAP four-disulfide core domain 2
mm9_v1_chr11_+_75578548_75578573	3.2833	CRX.p2	AK204716|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	AK199717|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr4_-_43053029_43053168	3.23989	CRX.p2	AK149610|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	AK154748|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	BC046771|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene
mm9_v1_chr2_-_84265422_84265424	3.23896	CRX.p2	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr5_-_122017844_122017859	3.22619	CRX.p2	AK178107|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK201448|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK219951|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr2_+_24192373_24192402	3.22081	CRX.p2	AK170378|Il1rn|16181|interleukin 1 receptor antagonist	AF001795|Il1rn|16181|interleukin 1 receptor antagonist	AK076296|Il1rn|16181|interleukin 1 receptor antagonist	NM_031167|Il1rn|16181|interleukin 1 receptor antagonist	BC042532|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr8_-_95721654_95721683	3.20961	CRX.p2	AB023631|Ces1d|104158|carboxylesterase 1D	AF378751|Ces1d|104158|carboxylesterase 1D	AK078879|Ces1d|104158|carboxylesterase 1D
mm9_v1_chr8_+_3641684_3641749	3.20306	CRX.p2	AK196224|Stxbp2|20911|syntaxin binding protein 2
mm9_v1_chr12_-_85741801_85741813	3.19191	CRX.p2	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr14_+_37868015_37868020	3.1909	CRX.p2	AK044631|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	NM_146245|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	BC032270|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
mm9_v1_chr4_-_115840142_115840210	3.18784	CRX.p2	BC003448|Tspan1|66805|tetraspanin 1	AK007428|Tspan1|66805|tetraspanin 1	AK078869|Tspan1|66805|tetraspanin 1	AK162521|Tspan1|66805|tetraspanin 1	NM_133681|Tspan1|66805|tetraspanin 1
mm9_v1_chr7_-_3796619_3796646	3.18281	CRX.p2	U96683|Pira2|18725|paired-Ig-like receptor A2	AF288356|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96682|Pira1|18722|paired-Ig-like receptor A1	BC026937|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
mm9_v1_chr4_+_154936480_154936531	3.18146	CRX.p2	NM_138671|Nadk|192185|NAD kinase	BC004012|Nadk|192185|NAD kinase
mm9_v1_chr4_-_133158082_133158082	3.17915	CRX.p2	NM_018754|Sfn|55948|stratifin
mm9_v1_chr3_-_88259682_88259708	3.17479	CRX.p2	NM_013658|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr4_-_132818988_132819001	3.17468	CRX.p2	AK078868|Sytl1|269589|synaptotagmin-like 1	AK154176|Sytl1|269589|synaptotagmin-like 1	BC005623|Sytl1|269589|synaptotagmin-like 1	NM_031393|Sytl1|269589|synaptotagmin-like 1
mm9_v1_chr8_+_26830480_26830683	3.15128	CRX.p2	NM_028000|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC023111|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK144593|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC089556|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC062173|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	AK009455|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC099489|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr15_-_7348393_7348394	3.14016	CRX.p2	AK158909|Egflam|268780|EGF-like, fibronectin type III and laminin G domains
mm9_v1_chr2_+_70529064_70529358	3.12013	CRX.p2	AK205781|Gorasp2|70231|golgi reassembly stacking protein 2	AK188777|Gorasp2|70231|golgi reassembly stacking protein 2	AK208233|Gorasp2|70231|golgi reassembly stacking protein 2	AK209932|Gorasp2|70231|golgi reassembly stacking protein 2	AK205979|Gorasp2|70231|golgi reassembly stacking protein 2
mm9_v1_chr10_-_124765435_124765590	3.10642	CRX.p2	BC117803|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC117804|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC126960|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC089606|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	AF058054|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	NM_011391|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm9_v1_chr7_-_16870007_16870007	3.08966	CRX.p2	BC021915|Ccdc9|243846|coiled-coil domain containing 9	NM_172297|Ccdc9|243846|coiled-coil domain containing 9
mm9_v1_chr9_-_62994774_62994817	3.08779	CRX.p2	BC138063|Skor1|207667|SKI family transcriptional corepressor 1	AK049035|Skor1|207667|SKI family transcriptional corepressor 1	NM_172446|Skor1|207667|SKI family transcriptional corepressor 1	AK134840|Skor1|207667|SKI family transcriptional corepressor 1	AB185113|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163755|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163757|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr4_+_141302635_141302765	3.07658	CRX.p2	AK017155|Agmat|75986|agmatine ureohydrolase (agmatinase)	BC115693|Agmat|75986|agmatine ureohydrolase (agmatinase)
mm9_v1_chr6_+_128837604_128837631	3.05784	CRX.p2	AY137344|Clec2i|93675|C-type lectin domain family 2, member i	AY137345|Clec2i|93675|C-type lectin domain family 2, member i	AK041724|Clec2i|93675|C-type lectin domain family 2, member i	AY256574|Clec2i|93675|C-type lectin domain family 2, member i	AY256575|Clec2i|93675|C-type lectin domain family 2, member i	AY256576|Clec2i|93675|C-type lectin domain family 2, member i	AF350411|Clec2i|93675|C-type lectin domain family 2, member i	AF121352|Clec2i|93675|C-type lectin domain family 2, member i	BC139192|Clec2i|93675|C-type lectin domain family 2, member i	BC139193|Clec2i|93675|C-type lectin domain family 2, member i	BC145574|Clec2i|93675|C-type lectin domain family 2, member i	NM_020257|Clec2i|93675|C-type lectin domain family 2, member i
mm9_v1_chr3_+_88390817_88390831	3.03098	CRX.p2	AK217251|Ssr2|66256|signal sequence receptor, beta
mm9_v1_chr7_+_17383134_17383219	3.02317	CRX.p2	AK182604|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK179124|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK215163|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5
mm9_v1_chr14_+_29831283_29831689	3.02006	CRX.p2	NM_176920|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	AK044492|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	AK138618|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	BC099587|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	BC132594|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	BC145990|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1
mm9_v1_chrX_-_159326220_159326424	2.98874	CRX.p2	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr10_+_75031386_75031408	2.98539	CRX.p2	L17334|Ggt1|14598|gamma-glutamyltransferase 1	AK079235|Ggt1|14598|gamma-glutamyltransferase 1
mm9_v1_chr6_+_122463595_122463620	2.96936	CRX.p2	AK011458|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr9_+_32201569_32201569	2.95011	CRX.p2	BC020525|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	NM_001168354|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1
mm9_v1_chr17_-_56144975_56145021	2.94241	CRX.p2	BC026642|Stap2|106766|signal transducing adaptor family member 2	NM_145934|Stap2|106766|signal transducing adaptor family member 2	AK050172|Stap2|106766|signal transducing adaptor family member 2	AK050131|Stap2|106766|signal transducing adaptor family member 2
mm9_v1_chr16_-_35697586_35697611	2.93366	CRX.p2	AK211101|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr14_+_75536138_75536231	2.92461	CRX.p2	BC022943|Lcp1|18826|lymphocyte cytosolic protein 1	NM_008879|Lcp1|18826|lymphocyte cytosolic protein 1
mm9_v1_chr13_+_4058817_4058874	2.91381	CRX.p2	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chrX_+_71669985_71670011	2.90763	CRX.p2	AF513109|Ikbkg|16151|inhibitor of kappaB kinase gamma
mm9_v1_chr2_+_152934184_152934350	2.89812	CRX.p2	NM_001172117|Hck|15162|hemopoietic cell kinase	NM_010407|Hck|15162|hemopoietic cell kinase	AK150709|Hck|15162|hemopoietic cell kinase	AK150290|Hck|15162|hemopoietic cell kinase	AK152506|Hck|15162|hemopoietic cell kinase	AK149736|Hck|15162|hemopoietic cell kinase	AK165315|Hck|15162|hemopoietic cell kinase	AK159234|Hck|15162|hemopoietic cell kinase	AK155975|Hck|15162|hemopoietic cell kinase	Y00487|Hck|15162|hemopoietic cell kinase	J03023|Hck|15162|hemopoietic cell kinase
mm9_v1_chr7_-_134040741_134040937	2.89515	CRX.p2	AK004043|Tmem219|68742|transmembrane protein 219	BC046763|Tmem219|68742|transmembrane protein 219
mm9_v1_chr13_+_23831738_23831861	2.8907	CRX.p2	AK207079|Hist1h1c|50708|histone cluster 1, H1c	AK215388|Hist1h1c|50708|histone cluster 1, H1c	AK216099|Hist1h1c|50708|histone cluster 1, H1c	AK216922|Hist1h1c|50708|histone cluster 1, H1c
mm9_v1_chr18_-_35426106_35426253	2.88889	CRX.p2	
mm9_v1_chr11_-_118254729_118254841	2.88736	CRX.p2	AK200165|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein
mm9_v1_chr4_-_141161882_141162024	2.87875	CRX.p2	AK170440|Fblim1|74202|filamin binding LIM protein 1	AK154680|Fblim1|74202|filamin binding LIM protein 1	AK163587|Fblim1|74202|filamin binding LIM protein 1	AK170151|Fblim1|74202|filamin binding LIM protein 1	NM_133754|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr14_+_73637961_73638071	2.87662	CRX.p2	BC145940|Lpar6|67168|lysophosphatidic acid receptor 6	BC145942|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr5_-_87853212_87853227	2.86795	CRX.p2	BC015272|Ugt2b38|100559|UDP glucuronosyltransferase 2 family, polypeptide B38	BC057169|Ugt2b38|100559|UDP glucuronosyltransferase 2 family, polypeptide B38	BC069923|Ugt2b38|100559|UDP glucuronosyltransferase 2 family, polypeptide B38	AK034801|Ugt2b38|100559|UDP glucuronosyltransferase 2 family, polypeptide B38	NM_133894|Ugt2b38|100559|UDP glucuronosyltransferase 2 family, polypeptide B38
mm9_v1_chr8_+_72332573_72332679	2.86038	CRX.p2	AK043883|Gmip|78816|Gem-interacting protein	BC057037|Gmip|78816|Gem-interacting protein	NM_198101|Gmip|78816|Gem-interacting protein	AK082337|Gmip|78816|Gem-interacting protein	AK172438|Gmip|78816|Gem-interacting protein	BC060628|Gmip|78816|Gem-interacting protein	AK137177|Gmip|78816|Gem-interacting protein	AK052221|Gmip|78816|Gem-interacting protein
mm9_v1_chr13_+_24895094_24895151	2.85238	CRX.p2	BC002217|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr4_-_141173938_141173956	2.85037	CRX.p2	BC025833|Tmem82|213989|transmembrane protein 82
mm9_v1_chr19_-_11679226_11679234	2.84981	CRX.p2	AB026047|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D	BC018331|Ms4a6d|68774|membrane-spanning 4-domains, subfamily A, member 6D
mm9_v1_chr6_+_141612118_141612134	2.8494	CRX.p2	AF250912|Slco1b2|28253|solute carrier organic anion transporter family, member 1b2
mm9_v1_chr11_-_78235686_78235735	2.84819	CRX.p2	AF201903|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	NM_022411|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	BC013493|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	AK140972|Slc13a2|20500|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
mm9_v1_chr15_-_82054741_82054798	2.84511	CRX.p2	DQ294928|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	DQ294929|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	BC104126|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	BC104127|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AK008142|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	NM_028075|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AK156387|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AF350257|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AF373847|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c	AK172406|Tnfrsf13c|72049|tumor necrosis factor receptor superfamily, member 13c
mm9_v1_chr4_-_131631226_131631229	2.84473	CRX.p2	NM_001128607|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr11_-_83391984_83392037	2.83816	CRX.p2	AF128195|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128196|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128197|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128198|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128199|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128200|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128201|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128202|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128203|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128204|Ccl9|20308|chemokine (C-C motif) ligand 9	BC139318|Ccl9|20308|chemokine (C-C motif) ligand 9	BC145962|Ccl9|20308|chemokine (C-C motif) ligand 9	U49513|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151131|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155036|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154511|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154657|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155032|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151649|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr7_+_114750357_114750357	2.82926	CRX.p2	BC100346|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)	NM_001163557|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm9_v1_chr3_+_87924435_87924571	2.82899	CRX.p2	BC022774|Iqgap3|404710|IQ motif containing GTPase activating protein 3
mm9_v1_chr10_+_21713735_21713756	2.8287	CRX.p2	AK132234|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr14_-_26747029_26747157	2.8246	CRX.p2	BC031854|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	AK002441|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	NM_026679|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed
mm9_v1_chr2_-_85359091_85359185	2.82389	CRX.p2	BC120879|4833423E24Rik|228151|RIKEN cDNA 4833423E24 gene	NM_001081664|4833423E24Rik|228151|RIKEN cDNA 4833423E24 gene	AK076485|4833423E24Rik|228151|RIKEN cDNA 4833423E24 gene
mm9_v1_chrX_+_75370805_75370805	2.81594	CRX.p2	NM_001085534|Gm5938|546335|predicted gene 5938
mm9_v1_chr10_+_128227964_128228056	2.8148	CRX.p2	AK079924|Mmp19|58223|matrix metallopeptidase 19	NM_001164197|Mmp19|58223|matrix metallopeptidase 19	AK080125|Mmp19|58223|matrix metallopeptidase 19	AK136517|Mmp19|58223|matrix metallopeptidase 19	NM_021412|Mmp19|58223|matrix metallopeptidase 19	AK154863|Mmp19|58223|matrix metallopeptidase 19	AF155221|Mmp19|58223|matrix metallopeptidase 19	AF162446|Mmp19|58223|matrix metallopeptidase 19	BC112966|Mmp19|58223|matrix metallopeptidase 19	AF153199|Mmp19|58223|matrix metallopeptidase 19
mm9_v1_chr2_-_6051177_6051230	2.80694	CRX.p2	AK132370|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	BC025867|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	BC029968|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	AK077380|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	NM_001159657|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene	NM_144883|5430407P10Rik|227545|RIKEN cDNA 5430407P10 gene
mm9_v1_chr14_+_63752151_63752250	2.74937	CRX.p2	M14222|Ctsb|13030|cathepsin B	AK190209|Ctsb|13030|cathepsin B	AK190539|Ctsb|13030|cathepsin B	AK191055|Ctsb|13030|cathepsin B	AK191391|Ctsb|13030|cathepsin B	AK196955|Ctsb|13030|cathepsin B	AK198213|Ctsb|13030|cathepsin B	AK199268|Ctsb|13030|cathepsin B	AK201893|Ctsb|13030|cathepsin B	AK202291|Ctsb|13030|cathepsin B	AK203639|Ctsb|13030|cathepsin B
mm9_v1_chr10_+_97110043_97110069	2.74648	CRX.p2	AK137179|Epyc|13516|epiphycan	D78274|Epyc|13516|epiphycan
mm9_v1_chr19_+_46697882_46697901	2.742	CRX.p2	AK078491|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK142695|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_001177813|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK052400|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr8_+_108424267_108424373	2.74106	CRX.p2	AK153861|Pskh1|244631|protein serine kinase H1	AK053397|Pskh1|244631|protein serine kinase H1	AK154570|Pskh1|244631|protein serine kinase H1	AK166338|Pskh1|244631|protein serine kinase H1	BC050128|Pskh1|244631|protein serine kinase H1	NM_173432|Pskh1|244631|protein serine kinase H1
mm9_v1_chr6_+_119186543_119186612	2.71121	CRX.p2	NM_001033382|Cacna2d4|319734|calcium channel, voltage-dependent, alpha 2/delta subunit 4	AK044427|Cacna2d4|319734|calcium channel, voltage-dependent, alpha 2/delta subunit 4	BC141091|Cacna2d4|319734|calcium channel, voltage-dependent, alpha 2/delta subunit 4
mm9_v1_chr3_+_94736993_94737043	2.71068	CRX.p2	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr8_+_48907496_48907496	2.69552	CRX.p2	NM_001111318|Cldn24|100039801|claudin 22-like
mm9_v1_chr7_+_51251248_51251248	2.69146	CRX.p2	BC013660|Klk1b11|16613|kallikrein 1-related peptidase b11	NM_010640|Klk1b11|16613|kallikrein 1-related peptidase b11
mm9_v1_chr8_-_74533511_74533524	2.68875	CRX.p2	BC013494|Cyp4f18|72054|cytochrome P450, family 4, subfamily f, polypeptide 18	AF233647|Cyp4f18|72054|cytochrome P450, family 4, subfamily f, polypeptide 18	AK007863|Cyp4f18|72054|cytochrome P450, family 4, subfamily f, polypeptide 18	NM_024444|Cyp4f18|72054|cytochrome P450, family 4, subfamily f, polypeptide 18
mm9_v1_chr4_-_129851941_129852025	2.68316	CRX.p2	BC005738|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	AB050626|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1
mm9_v1_chr6_-_48522660_48522745	2.67548	CRX.p2	AK002298|Rarres2|71660|retinoic acid receptor responder (tazarotene induced) 2	NM_027852|Rarres2|71660|retinoic acid receptor responder (tazarotene induced) 2	BC038914|Rarres2|71660|retinoic acid receptor responder (tazarotene induced) 2
mm9_v1_chr2_+_24200925_24200957	2.67292	CRX.p2	M74294|Il1rn|16181|interleukin 1 receptor antagonist	AK089222|Il1rn|16181|interleukin 1 receptor antagonist	AK154601|Il1rn|16181|interleukin 1 receptor antagonist	AK155263|Il1rn|16181|interleukin 1 receptor antagonist	AK155756|Il1rn|16181|interleukin 1 receptor antagonist	AK155846|Il1rn|16181|interleukin 1 receptor antagonist	AK155908|Il1rn|16181|interleukin 1 receptor antagonist	AK155798|Il1rn|16181|interleukin 1 receptor antagonist	AK156034|Il1rn|16181|interleukin 1 receptor antagonist	M57525|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr5_-_123632567_123632737	2.66706	CRX.p2	X59530|Hpd|15445|4-hydroxyphenylpyruvic acid dioxygenase	NM_008277|Hpd|15445|4-hydroxyphenylpyruvic acid dioxygenase	BC013343|Hpd|15445|4-hydroxyphenylpyruvic acid dioxygenase	AK149416|Hpd|15445|4-hydroxyphenylpyruvic acid dioxygenase	D29987|Hpd|15445|4-hydroxyphenylpyruvic acid dioxygenase
mm9_v1_chr8_-_71613058_71613120	2.65946	CRX.p2	BC027192|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	BC031146|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	NM_153054|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr7_-_20262178_20262212	2.65096	CRX.p2	NM_009695|Apoc2|11813|apolipoprotein C-II
mm9_v1_chr3_-_51129908_51129958	2.65063	CRX.p2	AF256216|Elf2|69257|E74-like factor 2	AF256217|Elf2|69257|E74-like factor 2	NM_023502|Elf2|69257|E74-like factor 2	BC092057|Elf2|69257|E74-like factor 2
mm9_v1_chr13_-_53472719_53472729	2.65058	CRX.p2	AK084445|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	X95641|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK079578|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	BC046323|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	NM_009269|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr19_+_9022763_9022826	2.64932	CRX.p2	AK003701|Mta2|23942|metastasis-associated gene family, member 2	AK186547|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr13_+_34056507_34056641	2.64839	CRX.p2	NM_001163239|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	NM_001163241|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	NM_020282|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK008138|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK008465|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK010842|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	AK049781|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2	BC027629|Nqo2|18105|NAD(P)H dehydrogenase, quinone 2
mm9_v1_chr4_-_132818944_132818958	2.63876	CRX.p2	AK131162|Sytl1|269589|synaptotagmin-like 1
mm9_v1_chr15_-_101632762_101632762	2.63806	CRX.p2	BC067067|Krt73|223915|keratin 73	NM_212485|Krt73|223915|keratin 73
mm9_v1_chrX_+_34337066_34337260	2.63014	CRX.p2	EF437333|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr11_+_3931731_3931881	2.62014	CRX.p2	BC026948|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	NM_146013|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	AK028954|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)
mm9_v1_chr11_+_100484226_100484324	2.61698	CRX.p2	AK083475|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK169878|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK010371|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK052645|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	NM_028024|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2	AK149696|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2
mm9_v1_chr10_+_98725871_98725972	2.59838	CRX.p2	AK009131|Dusp6|67603|dual specificity phosphatase 6	AK159146|Dusp6|67603|dual specificity phosphatase 6	AK159900|Dusp6|67603|dual specificity phosphatase 6
mm9_v1_chr17_-_34999068_34999191	2.59736	CRX.p2	AK149531|Cfb|14962|complement factor B	BC005451|Cfb|14962|complement factor B	AK098094|Cfb|14962|complement factor B	AK149573|Cfb|14962|complement factor B	M57890|Cfb|14962|complement factor B	AK151246|Cfb|14962|complement factor B
mm9_v1_chr7_-_139751384_139751389	2.59261	CRX.p2	AK190000|Oat|18242|ornithine aminotransferase	AK213292|Oat|18242|ornithine aminotransferase
mm9_v1_chr3_-_88259621_88259673	2.59087	CRX.p2	AK154392|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	AK077976|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	AK152728|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	AK153164|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr1_+_174065263_174065366	2.58593	CRX.p2	AK218140|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr7_+_109386818_109386954	2.58556	CRX.p2	AK019004|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr8_-_122333171_122333193	2.57529	CRX.p2	
mm9_v1_chr4_-_44079664_44079905	2.56899	CRX.p2	AK199019|Gne|50798|glucosamine	AJ132236|Gne|50798|glucosamine
mm9_v1_chr9_-_75407338_75407491	2.56391	CRX.p2	AF237630|Tmod3|50875|tropomodulin 3	AF177172|Tmod3|50875|tropomodulin 3	BC082595|Tmod3|50875|tropomodulin 3	AK167723|Tmod3|50875|tropomodulin 3	AK017725|Tmod3|50875|tropomodulin 3	AK050372|Tmod3|50875|tropomodulin 3	AK082971|Tmod3|50875|tropomodulin 3	AK147017|Tmod3|50875|tropomodulin 3	AK169218|Tmod3|50875|tropomodulin 3	NM_016963|Tmod3|50875|tropomodulin 3
mm9_v1_chr8_-_86217895_86217983	2.56009	CRX.p2	AK150062|Pkn1|320795|protein kinase N1	AK149649|Pkn1|320795|protein kinase N1	AK089431|Pkn1|320795|protein kinase N1	AK171297|Pkn1|320795|protein kinase N1
mm9_v1_chr2_+_24200807_24200875	2.55653	CRX.p2	AK171037|Il1rn|16181|interleukin 1 receptor antagonist	NM_001159562|Il1rn|16181|interleukin 1 receptor antagonist	M64404|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr13_+_112476313_112476385	2.54921	CRX.p2	AK147427|Mier3|218613|mesoderm induction early response 1, family member 3	NM_172593|Mier3|218613|mesoderm induction early response 1, family member 3
mm9_v1_chr1_+_21230683_21230717	2.54737	CRX.p2	AK014076|Gsta3|14859|glutathione S-transferase, alpha 3	AK149543|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr4_-_134828699_134828733	2.53282	CRX.p2	AK170942|Clic4|29876|chloride intracellular channel 4 (mitochondrial)
mm9_v1_chr15_-_99200868_99200941	2.52234	CRX.p2	AK139711|Fmnl3|22379|formin-like 3	AK163361|Fmnl3|22379|formin-like 3	AK170744|Fmnl3|22379|formin-like 3	NM_011711|Fmnl3|22379|formin-like 3	AK155331|Fmnl3|22379|formin-like 3
mm9_v1_chr12_-_104970691_104970782	2.5114	CRX.p2	M75716|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr7_-_30066910_30067008	2.50881	CRX.p2	AF099016|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099019|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099020|Spint2|20733|serine protease inhibitor, Kunitz type 2	BC003431|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_001082548|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_011464|Spint2|20733|serine protease inhibitor, Kunitz type 2
mm9_v1_chr5_+_90919768_90919776	2.50289	CRX.p2	BC066206|Afp|11576|alpha fetoprotein
mm9_v1_chr14_-_62058627_62058783	2.48748	CRX.p2	AF020772|Kpna3|16648|karyopherin (importin) alpha 3	AK011559|Kpna3|16648|karyopherin (importin) alpha 3	AK049373|Kpna3|16648|karyopherin (importin) alpha 3	BC026885|Kpna3|16648|karyopherin (importin) alpha 3	AK161664|Kpna3|16648|karyopherin (importin) alpha 3	NM_008466|Kpna3|16648|karyopherin (importin) alpha 3
mm9_v1_chr7_-_3796651_3796654	2.47781	CRX.p2	AK140776|Pira2|18725|paired-Ig-like receptor A2	AK137475|Pira2|18725|paired-Ig-like receptor A2	AK172046|Pira2|18725|paired-Ig-like receptor A2	NM_011089|Pira2|18725|paired-Ig-like receptor A2
mm9_v1_chr17_-_33918382_33918492	2.47508	CRX.p2	AF169313|Angptl4|57875|angiopoietin-like 4	AB054540|Angptl4|57875|angiopoietin-like 4	AF123261|Angptl4|57875|angiopoietin-like 4	AF278699|Angptl4|57875|angiopoietin-like 4	BC025797|Angptl4|57875|angiopoietin-like 4	BC006611|Angptl4|57875|angiopoietin-like 4	BC021343|Angptl4|57875|angiopoietin-like 4	AK032491|Angptl4|57875|angiopoietin-like 4	AK132761|Angptl4|57875|angiopoietin-like 4	AK134419|Angptl4|57875|angiopoietin-like 4
mm9_v1_chr4_-_16090542_16090675	2.4674	CRX.p2	AF461040|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2	AF487539|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2	NM_138952|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2	BC069878|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2	BC050845|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2	AK159593|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2	AK172319|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2	AK172417|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2
mm9_v1_chr11_+_100938836_100938840	2.46705	CRX.p2	AK184461|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK218979|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr17_-_73748552_73748635	2.46507	CRX.p2	BC147510|Capn13|381122|calpain 13	BC147512|Capn13|381122|calpain 13	AK136569|Capn13|381122|calpain 13	NM_001033444|Capn13|381122|calpain 13
mm9_v1_chr4_+_116667905_116667941	2.45927	CRX.p2	AK163323|Hectd3|76608|HECT domain containing 3	AK165482|Hectd3|76608|HECT domain containing 3	AK154378|Hectd3|76608|HECT domain containing 3	AK139305|Hectd3|76608|HECT domain containing 3	AK051385|Hectd3|76608|HECT domain containing 3	AK155290|Hectd3|76608|HECT domain containing 3	AK155676|Hectd3|76608|HECT domain containing 3	AK170930|Hectd3|76608|HECT domain containing 3
mm9_v1_chr2_-_75542552_75542719	2.44796	CRX.p2	BC003340|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	AK144247|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	AK029360|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	AK142347|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	BC026943|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	NM_010902|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	U20532|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2
mm9_v1_chr5_-_87521097_87521106	2.43985	CRX.p2	AK149596|Ugt2b36|231396|UDP glucuronosyltransferase 2 family, polypeptide B36
mm9_v1_chr2_+_62502329_62502489	2.4335	CRX.p2	AK046347|Gca|227960|grancalcin	AK050540|Gca|227960|grancalcin	AK033740|Gca|227960|grancalcin	AK040549|Gca|227960|grancalcin	AK049317|Gca|227960|grancalcin	AK078915|Gca|227960|grancalcin	NM_145523|Gca|227960|grancalcin	AF518325|Gca|227960|grancalcin	BC021450|Gca|227960|grancalcin	AB088388|Gca|227960|grancalcin
mm9_v1_chr17_+_35189798_35189804	2.42871	CRX.p2	
mm9_v1_chr2_-_79969429_79969614	2.41999	CRX.p2	AK050004|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001159582|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK021279|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr5_+_87429884_87429898	2.41899	CRX.p2	AK083294|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	NM_172881|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	BC113789|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35	AK149501|Ugt2b35|243085|UDP glucuronosyltransferase 2 family, polypeptide B35
mm9_v1_chr8_+_36650839_36650928	2.41658	CRX.p2	BC082308|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1	NM_001081279|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr4_-_141154138_141154141	2.41475	CRX.p2	AK010660|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr13_-_53472732_53472776	2.41464	CRX.p2	AK084391|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AF003823|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK089030|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK053207|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK028713|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK161140|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr15_+_54943878_54943952	2.41238	CRX.p2	BC004774|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr6_+_3944011_3944021	2.40982	CRX.p2	AK020863|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	AK020903|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_010314|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	BC023064|Gngt1|14699|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
mm9_v1_chr3_-_88265103_88265103	2.40573	CRX.p2	NM_001163489|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	X85991|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr19_-_34316029_34316112	2.38912	CRX.p2	AK080187|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK137170|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chr4_+_122731563_122731731	2.38856	CRX.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chrX_+_97800835_97800900	2.36829	CRX.p2	NM_133205|Arr3|170735|arrestin 3, retinal	AF156979|Arr3|170735|arrestin 3, retinal	BC017145|Arr3|170735|arrestin 3, retinal
mm9_v1_chr11_-_103227984_103228190	2.36435	CRX.p2	AK181665|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK216813|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK183705|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK048562|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr11_+_95703598_95703608	2.3586	CRX.p2	NM_023121|Gngt2|14710|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
mm9_v1_chr15_-_74828317_74828336	2.35799	CRX.p2	BC002070|Ly6a|110454|lymphocyte antigen 6 complex, locus A	NM_010738|Ly6a|110454|lymphocyte antigen 6 complex, locus A	X04653|Ly6a|110454|lymphocyte antigen 6 complex, locus A	J03636|Ly6a|110454|lymphocyte antigen 6 complex, locus A	AK076200|Ly6a|110454|lymphocyte antigen 6 complex, locus A
mm9_v1_chr7_-_3867085_3867115	2.34427	CRX.p2	BC119598|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011087|Pira1|18722|paired-Ig-like receptor A1	U96682|Pira1|18722|paired-Ig-like receptor A1	BC127613|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	BC128500|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	U96684|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK152898|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011090|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK030846|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK054162|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
mm9_v1_chr1_+_94869716_94869782	2.34408	CRX.p2	AK154203|Gpr35|64095|G protein-coupled receptor 35	AF200349|Gpr35|64095|G protein-coupled receptor 35
mm9_v1_chr2_+_29989278_29989390	2.33917	CRX.p2	AK158066|Tbc1d13|70296|TBC1 domain family, member 13	AK188413|Tbc1d13|70296|TBC1 domain family, member 13	BC025586|Tbc1d13|70296|TBC1 domain family, member 13	NM_146252|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr7_-_16844686_16844730	2.31277	CRX.p2	BC125641|C5ar1|12273|complement component 5a receptor 1	BC125643|C5ar1|12273|complement component 5a receptor 1	NM_001173550|C5ar1|12273|complement component 5a receptor 1
mm9_v1_chr12_-_70299271_70299415	2.30473	CRX.p2	AB455811|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	BC055807|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	BC062898|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	NM_027269|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene
mm9_v1_chr13_-_104623606_104623708	2.30442	CRX.p2	BC005691|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr10_-_14438019_14438019	2.30421	CRX.p2	AK018698|Gje1|76743|gap junction protein, epsilon 1	NM_029722|Gje1|76743|gap junction protein, epsilon 1
mm9_v1_chrX_+_71669971_71669979	2.29613	CRX.p2	BC021431|Ikbkg|16151|inhibitor of kappaB kinase gamma
mm9_v1_chr10_-_127838240_127838284	2.29549	CRX.p2	BC028990|Slc39a5|72002|solute carrier family 39 (metal ion transporter), member 5	NM_001136237|Slc39a5|72002|solute carrier family 39 (metal ion transporter), member 5
mm9_v1_chr19_+_4083489_4083518	2.29397	CRX.p2	AF169156|Cabp2|29866|calcium binding protein 2	AF169157|Cabp2|29866|calcium binding protein 2	BC107029|Cabp2|29866|calcium binding protein 2	NM_001160252|Cabp2|29866|calcium binding protein 2	NM_013878|Cabp2|29866|calcium binding protein 2
mm9_v1_chr11_-_86331141_86331142	2.29202	CRX.p2	AK012045|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1
mm9_v1_chr3_+_95238406_95238462	2.28922	CRX.p2	AK141362|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U10325|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	U14333|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr16_+_38562924_38562994	2.27837	CRX.p2	AK169127|Tmem39a|67846|transmembrane protein 39a	AK011646|Tmem39a|67846|transmembrane protein 39a	AK133638|Tmem39a|67846|transmembrane protein 39a	AK017817|Tmem39a|67846|transmembrane protein 39a	BC020318|Tmem39a|67846|transmembrane protein 39a	NM_026407|Tmem39a|67846|transmembrane protein 39a
mm9_v1_chr19_-_39961258_39961288	2.27321	CRX.p2	NM_001104525|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69	BC145630|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69
mm9_v1_chr17_-_35309483_35309575	2.27217	CRX.p2	CT010265|Aif1|11629|allograft inflammatory factor 1	CT010385|Aif1|11629|allograft inflammatory factor 1	AB013745|Aif1|11629|allograft inflammatory factor 1	AF074959|Aif1|11629|allograft inflammatory factor 1	D86382|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr16_+_59471600_59471691	2.27144	CRX.p2	NM_025910|Mina|67014|myc induced nuclear antigen	AK007810|Mina|67014|myc induced nuclear antigen	AK032595|Mina|67014|myc induced nuclear antigen	AK013451|Mina|67014|myc induced nuclear antigen	AK014426|Mina|67014|myc induced nuclear antigen	AK019117|Mina|67014|myc induced nuclear antigen	AK031671|Mina|67014|myc induced nuclear antigen	BC025109|Mina|67014|myc induced nuclear antigen	BC058242|Mina|67014|myc induced nuclear antigen
mm9_v1_chr10_+_39332739_39332739	2.27099	CRX.p2	AK052190|Traf3ip2|103213|TRAF3 interacting protein 2	NM_134000|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr19_+_40734282_40734322	2.26807	CRX.p2	AK030601|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	NM_009848|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	BC011278|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	AF037366|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1
mm9_v1_chr19_-_17414057_17414057	2.2643	CRX.p2	NM_001136484|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	U19265|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr9_+_114640266_114640368	2.26108	CRX.p2	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr11_-_69619087_69619125	2.25944	CRX.p2	BC144871|Tmem102|380705|transmembrane protein 102	AK143262|Tmem102|380705|transmembrane protein 102	NM_001033433|Tmem102|380705|transmembrane protein 102
mm9_v1_chr15_+_79722811_79722966	2.25896	CRX.p2	AK154035|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	NM_001160415|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	NM_030255|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	BC003314|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK049256|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK044394|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK049998|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK153719|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461446|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461447|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461448|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461449|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707568|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707570|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	GQ871501|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707569|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707571|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm9_v1_chr14_+_31362306_31362551	2.25337	CRX.p2	AK166763|Tkt|21881|transketolase	AK167084|Tkt|21881|transketolase	AK140965|Tkt|21881|transketolase	AK030446|Tkt|21881|transketolase	NM_009388|Tkt|21881|transketolase	AK152460|Tkt|21881|transketolase	AK002627|Tkt|21881|transketolase	AK012794|Tkt|21881|transketolase	AK145677|Tkt|21881|transketolase	AK150139|Tkt|21881|transketolase	AK150901|Tkt|21881|transketolase	AK159922|Tkt|21881|transketolase	U05809|Tkt|21881|transketolase	AK050793|Tkt|21881|transketolase	AK146157|Tkt|21881|transketolase	AK144146|Tkt|21881|transketolase	AK150769|Tkt|21881|transketolase	AK150844|Tkt|21881|transketolase	AK150856|Tkt|21881|transketolase	AK152245|Tkt|21881|transketolase	AK151916|Tkt|21881|transketolase	AK151969|Tkt|21881|transketolase	AK152886|Tkt|21881|transketolase	BC055336|Tkt|21881|transketolase	AK216935|Tkt|21881|transketolase	AK181952|Tkt|21881|transketolase
mm9_v1_chrX_-_75041092_75041310	2.25229	CRX.p2	AK152166|Prkx|19108|protein kinase, X-linked	AJ238004|Prkx|19108|protein kinase, X-linked	AK169322|Prkx|19108|protein kinase, X-linked	AK150588|Prkx|19108|protein kinase, X-linked	AK036432|Prkx|19108|protein kinase, X-linked	AK149937|Prkx|19108|protein kinase, X-linked	AK081548|Prkx|19108|protein kinase, X-linked	AK154447|Prkx|19108|protein kinase, X-linked	AK037141|Prkx|19108|protein kinase, X-linked	BC006875|Prkx|19108|protein kinase, X-linked	NM_016979|Prkx|19108|protein kinase, X-linked	AK139510|Prkx|19108|protein kinase, X-linked	AK039088|Prkx|19108|protein kinase, X-linked
mm9_v1_chr2_-_34817068_34817291	2.2498	CRX.p2	AK169515|Traf1|22029|TNF receptor-associated factor 1	AK089281|Traf1|22029|TNF receptor-associated factor 1	L35302|Traf1|22029|TNF receptor-associated factor 1	AK142931|Traf1|22029|TNF receptor-associated factor 1	AK029135|Traf1|22029|TNF receptor-associated factor 1	NM_009421|Traf1|22029|TNF receptor-associated factor 1
mm9_v1_chr8_+_74135114_74135308	2.24926	CRX.p2	BC018287|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr5_-_87569342_87569376	2.24289	CRX.p2	X06358|Ugt2b5|22238|UDP glucuronosyltransferase 2 family, polypeptide B5	BC028262|Ugt2b5|22238|UDP glucuronosyltransferase 2 family, polypeptide B5	AK136480|Ugt2b5|22238|UDP glucuronosyltransferase 2 family, polypeptide B5	NM_009467|Ugt2b5|22238|UDP glucuronosyltransferase 2 family, polypeptide B5
mm9_v1_chr3_+_106285348_106285547	2.2343	CRX.p2	AK157279|Dennd2d|72121|DENN/MADD domain containing 2D	NM_001093754|Dennd2d|72121|DENN/MADD domain containing 2D	AK050033|Dennd2d|72121|DENN/MADD domain containing 2D	AK008546|Dennd2d|72121|DENN/MADD domain containing 2D
mm9_v1_chr19_-_17912073_17912162	2.23305	CRX.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr16_+_48872756_48872760	2.23256	CRX.p2	AJ536019|Retnlg|245195|resistin like gamma	AK158401|Retnlg|245195|resistin like gamma
mm9_v1_chr2_-_131000485_131000584	2.22933	CRX.p2	BC006046|Spef1|70997|sperm flagellar 1	AK047675|Spef1|70997|sperm flagellar 1	NM_027641|Spef1|70997|sperm flagellar 1	AY860964|Spef1|70997|sperm flagellar 1	AK016476|Spef1|70997|sperm flagellar 1
mm9_v1_chr5_-_92757021_92757142	2.22576	CRX.p2	AK042480|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	CT010194|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	BC003343|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157109|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK042017|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156012|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156029|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156453|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157118|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	NM_008599|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	M34815|Cxcl9|17329|chemokine (C-X-C motif) ligand 9
mm9_v1_chr17_+_35403998_35404048	2.22132	CRX.p2	
mm9_v1_chr2_+_165818203_165818241	2.22055	CRX.p2	AK142306|Ncoa3|17979|nuclear receptor coactivator 3
mm9_v1_chr2_-_163470870_163470922	2.20487	CRX.p2	NM_012032|Serinc3|26943|serine incorporator 3
mm9_v1_chr4_-_141173895_141173934	2.20209	CRX.p2	AK162322|Tmem82|213989|transmembrane protein 82	AK154809|Tmem82|213989|transmembrane protein 82
mm9_v1_chr2_-_84615535_84615589	2.19892	CRX.p2	Y10386|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AF010254|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	NM_009776|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr8_-_108462291_108462291	2.19378	CRX.p2	NM_013640|Psmb10|19171|proteasome (prosome, macropain) subunit, beta type 10
mm9_v1_chr2_+_101464874_101464960	2.189	CRX.p2	AK089075|Rag2|19374|recombination activating gene 2	AK031014|Rag2|19374|recombination activating gene 2	AK040375|Rag2|19374|recombination activating gene 2	NM_009020|Rag2|19374|recombination activating gene 2	BC120548|Rag2|19374|recombination activating gene 2	BC125473|Rag2|19374|recombination activating gene 2	BC144856|Rag2|19374|recombination activating gene 2	M64796|Rag2|19374|recombination activating gene 2
mm9_v1_chrX_+_156411885_156411895	2.18575	CRX.p2	AK200438|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr5_-_86539474_86539529	2.18038	CRX.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr19_-_23522811_23522929	2.18	CRX.p2	AK035566|Mamdc2|71738|MAM domain containing 2	NM_174857|Mamdc2|71738|MAM domain containing 2	BC042773|Mamdc2|71738|MAM domain containing 2	AK154219|Mamdc2|71738|MAM domain containing 2	AK004794|Mamdc2|71738|MAM domain containing 2
mm9_v1_chr4_+_140256449_140256455	2.17486	CRX.p2	AK076046|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr16_+_34921598_34921714	2.16539	CRX.p2	AY237727|Mylk|107589|myosin, light polypeptide kinase	BC045197|Mylk|107589|myosin, light polypeptide kinase	AK078556|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr2_-_44968728_44968798	2.16178	CRX.p2	AJ535782|Zeb2|24136|zinc finger E-box binding homeobox 2	AK031541|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535780|Zeb2|24136|zinc finger E-box binding homeobox 2	NM_015753|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chrX_-_75336699_75336712	2.1555	CRX.p2	BC125514|Obp1a|18249|odorant binding protein Ia	BC125516|Obp1a|18249|odorant binding protein Ia	AK017455|Obp1a|18249|odorant binding protein Ia	NM_008754|Obp1a|18249|odorant binding protein Ia
mm9_v1_chr7_+_135047561_135047646	2.15252	CRX.p2	NM_009739|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150607|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150723|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK167519|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK145479|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	BC046595|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr1_-_36300951_36301026	2.15136	CRX.p2	AK087883|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK144381|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr6_-_134742342_134742495	2.14792	CRX.p2	AB052157|Dusp16|70686|dual specificity phosphatase 16	BC059232|Dusp16|70686|dual specificity phosphatase 16	AF345951|Dusp16|70686|dual specificity phosphatase 16	AF345952|Dusp16|70686|dual specificity phosphatase 16	AF345953|Dusp16|70686|dual specificity phosphatase 16	AF345954|Dusp16|70686|dual specificity phosphatase 16	BC057321|Dusp16|70686|dual specificity phosphatase 16
mm9_v1_chr7_-_133929984_133930019	2.14791	CRX.p2	AK199030|Ppp4c|56420|protein phosphatase 4, catalytic subunit
mm9_v1_chr10_+_21713669_21713695	2.13775	CRX.p2	NM_001161850|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr4_-_123427465_123427587	2.13537	CRX.p2	AK006378|Akirin1|68050|akirin 1	AK078055|Akirin1|68050|akirin 1	AB041594|Akirin1|68050|akirin 1	AK160087|Akirin1|68050|akirin 1	AK168201|Akirin1|68050|akirin 1	AK168214|Akirin1|68050|akirin 1	AK146017|Akirin1|68050|akirin 1	AK168530|Akirin1|68050|akirin 1	AK159632|Akirin1|68050|akirin 1	NM_023423|Akirin1|68050|akirin 1	BC003291|Akirin1|68050|akirin 1
mm9_v1_chr2_+_152987036_152987075	2.13381	CRX.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr10_-_90612412_90612509	2.12653	CRX.p2	AK208952|Tmpo|21917|thymopoietin
mm9_v1_chr17_+_75835208_75835359	2.12624	CRX.p2	NM_001166493|Rasgrp3|240168|RAS, guanyl releasing protein 3	AK173041|Rasgrp3|240168|RAS, guanyl releasing protein 3
mm9_v1_chr1_+_21230664_21230669	2.1231	CRX.p2	NM_001077353|Gsta3|14859|glutathione S-transferase, alpha 3	NM_010356|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr3_+_94497485_94497530	2.11574	CRX.p2	NM_019414|Selenbp2|20342|selenium binding protein 2	S56599|Selenbp2|20342|selenium binding protein 2	BC024106|Selenbp2|20342|selenium binding protein 2
mm9_v1_chr7_+_133572567_133572631	2.10624	CRX.p2	AK089938|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2	AK144836|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2	AK157832|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2
mm9_v1_chr6_-_128531620_128531628	2.10144	CRX.p2	AK138836|BC048546|232400|cDNA sequence BC048546	NM_001001179|BC048546|232400|cDNA sequence BC048546	AK161184|BC048546|232400|cDNA sequence BC048546
mm9_v1_chr11_-_106175797_106175983	2.06138	CRX.p2	CT010358|Cd79b|15985|CD79B antigen	AK143573|Cd79b|15985|CD79B antigen	BC012226|Cd79b|15985|CD79B antigen	NM_008339|Cd79b|15985|CD79B antigen	J03857|Cd79b|15985|CD79B antigen
mm9_v1_chr5_-_128097687_128097794	2.05774	CRX.p2	BC016233|Slc15a4|100561|solute carrier family 15, member 4	NM_133895|Slc15a4|100561|solute carrier family 15, member 4	AY050630|Slc15a4|100561|solute carrier family 15, member 4	AK048529|Slc15a4|100561|solute carrier family 15, member 4	AK154238|Slc15a4|100561|solute carrier family 15, member 4
mm9_v1_chrX_+_103320051_103320105	2.05569	CRX.p2	AK030847|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK040753|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr7_+_25378887_25378951	2.04574	CRX.p2	BC010592|Ethe1|66071|ethylmalonic encephalopathy 1	AK002666|Ethe1|66071|ethylmalonic encephalopathy 1	AB049623|Ethe1|66071|ethylmalonic encephalopathy 1	BC083162|Ethe1|66071|ethylmalonic encephalopathy 1
mm9_v1_chr6_-_23600205_23600304	2.03466	CRX.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr3_-_88259594_88259600	2.024	CRX.p2	BC025800|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr9_+_110558996_110559065	2.01334	CRX.p2	AK012610|Ccdc12|72654|coiled-coil domain containing 12	NM_028312|Ccdc12|72654|coiled-coil domain containing 12	BC026668|Ccdc12|72654|coiled-coil domain containing 12
mm9_v1_chr11_-_46503858_46503858	2.00989	CRX.p2	AB009015|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2	NM_001161356|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr17_+_18024787_18024817	2.00405	CRX.p2	AK054286|Fpr2|14289|formyl peptide receptor 2	NM_008039|Fpr2|14289|formyl peptide receptor 2	U78299|Fpr3|14294|formyl peptide receptor 3
mm9_v1_chr19_+_56362397_56362451	2.00302	CRX.p2	AK132407|Habp2|226243|hyaluronic acid binding protein 2	AK128915|Habp2|226243|hyaluronic acid binding protein 2	AK149504|Habp2|226243|hyaluronic acid binding protein 2	BC031775|Habp2|226243|hyaluronic acid binding protein 2	NM_146101|Habp2|226243|hyaluronic acid binding protein 2
mm9_v1_chr9_-_69885894_69885894	1.99766	CRX.p2	EF202835|Gcnt3|72077|glucosaminyl (N-acetyl) transferase 3, mucin type	NM_028087|Gcnt3|72077|glucosaminyl (N-acetyl) transferase 3, mucin type
mm9_v1_chr7_+_114738722_114738798	1.99153	CRX.p2	AK171349|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)	BC051202|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)	U79024|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)	AK035364|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)	BC086931|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm9_v1_chr5_+_53440591_53440620	1.98496	CRX.p2	AK164786|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	NM_011402|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK004832|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK145599|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AF081499|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	BC096369|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2
mm9_v1_chr17_-_35338849_35338954	1.98129	CRX.p2	BC117057|Tnf|21926|tumor necrosis factor	BC137720|Tnf|21926|tumor necrosis factor	M11731|Tnf|21926|tumor necrosis factor	NM_013693|Tnf|21926|tumor necrosis factor	X02611|Tnf|21926|tumor necrosis factor	AK155964|Tnf|21926|tumor necrosis factor	AK154223|Tnf|21926|tumor necrosis factor	M13049|Tnf|21926|tumor necrosis factor	AK153319|Tnf|21926|tumor necrosis factor	AK153800|Tnf|21926|tumor necrosis factor
mm9_v1_chrX_-_143838294_143838374	1.97918	CRX.p2	BC003723|Il13ra2|16165|interleukin 13 receptor, alpha 2	NM_008356|Il13ra2|16165|interleukin 13 receptor, alpha 2	U65747|Il13ra2|16165|interleukin 13 receptor, alpha 2
mm9_v1_chr10_+_21097094_21097135	1.97791	CRX.p2	AF510322|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	AK050298|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	AK165447|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	NM_178713|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1	AK143752|Aldh8a1|237320|aldehyde dehydrogenase 8 family, member A1
mm9_v1_chr17_-_87657365_87657420	1.97485	CRX.p2	GQ896355|Mcfd2|193813|multiple coagulation factor deficiency 2	GQ896356|Mcfd2|193813|multiple coagulation factor deficiency 2	AK206943|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr1_+_179659944_179659944	1.97365	CRX.p2	AK006014|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene	NM_027077|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene
mm9_v1_chr19_-_11410534_11410635	1.9675	CRX.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr7_+_51462804_51462808	1.96303	CRX.p2	BC034518|Klk1b4|18048|kallikrein 1-related pepidase b4	NM_010915|Klk1b4|18048|kallikrein 1-related pepidase b4	M11434|Klk1b4|18048|kallikrein 1-related pepidase b4
mm9_v1_chr2_+_38367184_38367395	1.96062	CRX.p2	AK029266|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AF218847|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_021606|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK086700|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK011519|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075836|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK018168|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK004925|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075717|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK089919|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	BC019524|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK170757|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_001159631|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr15_-_75262160_75262258	1.94915	CRX.p2	BC147461|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC147464|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	AK136484|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC087965|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	NM_001039720|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene
mm9_v1_chr2_-_126317267_126317308	1.94717	CRX.p2	AK173307|Atp8b4|241633|ATPase, class I, type 8B, member 4	NM_001080944|Atp8b4|241633|ATPase, class I, type 8B, member 4	AK169967|Atp8b4|241633|ATPase, class I, type 8B, member 4
mm9_v1_chr9_-_44788402_44788513	1.94708	CRX.p2	EF474453|Cd3g|12502|CD3 antigen, gamma polypeptide	GU456630|Cd3g|12502|CD3 antigen, gamma polypeptide	M58149|Cd3g|12502|CD3 antigen, gamma polypeptide	AK153987|Cd3g|12502|CD3 antigen, gamma polypeptide	AK153980|Cd3g|12502|CD3 antigen, gamma polypeptide	BC027528|Cd3g|12502|CD3 antigen, gamma polypeptide	AK134049|Cd3g|12502|CD3 antigen, gamma polypeptide	NM_009850|Cd3g|12502|CD3 antigen, gamma polypeptide
mm9_v1_chr4_+_115190888_115190920	1.94129	CRX.p2	AK002528|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10	NM_010011|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10	AK098101|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10	AB017785|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10	AB018421|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10	BC051049|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10	BC010747|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10	BC013476|Cyp4a31|666168|cytochrome P450, family 4, subfamily a, polypeptide 31	X69296|Cyp4a10|13117|cytochrome P450, family 4, subfamily a, polypeptide 10
mm9_v1_chr5_+_115916274_115916295	1.93999	CRX.p2	AF162712|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145546|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145908|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145910|Pla2g1b|18778|phospholipase A2, group IB, pancreas	NM_011107|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008934|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK028134|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008331|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK028104|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK007797|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008664|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008668|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK007730|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK019009|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF094610|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008841|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008936|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK009314|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF097637|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF187852|Pla2g1b|18778|phospholipase A2, group IB, pancreas
mm9_v1_chr6_+_13821522_13821573	1.93815	CRX.p2	AK143417|1110019D14Rik|76311|RIKEN cDNA 1110019D14 gene	AK003812|1110019D14Rik|76311|RIKEN cDNA 1110019D14 gene
mm9_v1_chr6_+_41365305_41365305	1.931	CRX.p2	NM_001003664|Gm5409|386551|predicted pseudogene 5409
mm9_v1_chr12_+_117519658_117519785	1.92374	CRX.p2	AK044360|Esyt2|52635|extended synaptotagmin-like protein 2	NM_028731|Esyt2|52635|extended synaptotagmin-like protein 2	AK014813|Esyt2|52635|extended synaptotagmin-like protein 2	AK157352|Esyt2|52635|extended synaptotagmin-like protein 2	BC138937|Esyt2|52635|extended synaptotagmin-like protein 2
mm9_v1_chr11_+_96891242_96891268	1.91887	CRX.p2	NM_146027|Scrn2|217140|secernin 2
mm9_v1_chr7_-_108112785_108112972	1.91431	CRX.p2	AX775901|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC064095|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	BC027331|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008436|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK008496|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	NM_183168|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6	AK142680|P2ry6|233571|pyrimidinergic receptor P2Y, G-protein coupled, 6
mm9_v1_chr4_-_129852030_129852047	1.91285	CRX.p2	BC018539|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	AK040827|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	AK087142|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	NM_001168333|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1
mm9_v1_chr15_-_63676716_63676730	1.91079	CRX.p2	BC113155|Gsdmc2|331063|gasdermin C2	AK033603|Gsdmc2|331063|gasdermin C2	NM_001168274|Gsdmc2|331063|gasdermin C2	NM_177912|Gsdmc2|331063|gasdermin C2
mm9_v1_chrX_+_97710893_97711108	1.91037	CRX.p2	AK218313|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK210875|Igbp1|18518|immunoglobulin (CD79A) binding protein 1
mm9_v1_chr10_+_128236561_128236694	1.9025	CRX.p2	AK135651|Mmp19|58223|matrix metallopeptidase 19
mm9_v1_chr15_+_9265343_9265371	1.90136	CRX.p2	AK052644|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	AK050128|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	NM_144845|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	BC022134|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	AK041045|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	BC034837|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2
mm9_v1_chr5_+_90919758_90919765	1.90136	CRX.p2	AK075972|Afp|11576|alpha fetoprotein	AK076197|Afp|11576|alpha fetoprotein	AK146513|Afp|11576|alpha fetoprotein	AK146524|Afp|11576|alpha fetoprotein	AK168426|Afp|11576|alpha fetoprotein	AK168574|Afp|11576|alpha fetoprotein	AK168751|Afp|11576|alpha fetoprotein	AK169046|Afp|11576|alpha fetoprotein	AK169054|Afp|11576|alpha fetoprotein	AK010934|Afp|11576|alpha fetoprotein	AK076053|Afp|11576|alpha fetoprotein	AK145975|Afp|11576|alpha fetoprotein	AK168576|Afp|11576|alpha fetoprotein	AK168883|Afp|11576|alpha fetoprotein	AK169147|Afp|11576|alpha fetoprotein	AK167549|Afp|11576|alpha fetoprotein	V00743|Afp|11576|alpha fetoprotein
mm9_v1_chr6_-_29330414_29330512	1.89879	CRX.p2	U49720|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	BC050002|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	BC058267|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	AF190670|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	BC026021|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	NM_007538|Opn1sw|12057|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
mm9_v1_chr17_-_35309654_35309677	1.89744	CRX.p2	BC021539|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr16_+_23224955_23224980	1.89131	CRX.p2	AK084124|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr19_+_9092973_9093058	1.88676	CRX.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr4_+_99768456_99768466	1.88158	CRX.p2	AK087548|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr3_+_41368801_41368825	1.86835	CRX.p2	NM_001130186|Phf17|269424|PHD finger protein 17
mm9_v1_chr2_+_32442585_32442614	1.86542	CRX.p2	AJ007310|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK085730|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK144884|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK155956|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK159712|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK161559|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	AK007601|St6galnac4|20448|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
mm9_v1_chr9_-_50425561_50425568	1.86245	CRX.p2	NM_001134902|AU019823|270156|expressed sequence AU019823	NM_212449|AU019823|270156|expressed sequence AU019823
mm9_v1_chr3_-_113159420_113159575	1.85209	CRX.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr11_+_96891270_96891328	1.85035	CRX.p2	AK075869|Scrn2|217140|secernin 2	BC021346|Scrn2|217140|secernin 2	BC010784|Scrn2|217140|secernin 2
mm9_v1_chr3_-_144695718_144695741	1.84795	CRX.p2	BC028343|Clca3|23844|chloride channel calcium activated 3	AB017156|Clca3|23844|chloride channel calcium activated 3	BC116318|Clca3|23844|chloride channel calcium activated 3	BC116319|Clca3|23844|chloride channel calcium activated 3	AK007466|Clca3|23844|chloride channel calcium activated 3	AK008659|Clca3|23844|chloride channel calcium activated 3	AK136476|Clca3|23844|chloride channel calcium activated 3	AK033560|Clca3|23844|chloride channel calcium activated 3	NM_017474|Clca3|23844|chloride channel calcium activated 3
mm9_v1_chr17_-_35312945_35312945	1.84743	CRX.p2	AK006184|Aif1|11629|allograft inflammatory factor 1	AK006562|Aif1|11629|allograft inflammatory factor 1	NM_019467|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr11_-_46520535_46520580	1.84549	CRX.p2	BC025096|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2	BC028829|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr1_+_45368443_45368526	1.83974	CRX.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr11_+_83476085_83476138	1.83948	CRX.p2	NM_013652|Ccl4|20303|chemokine (C-C motif) ligand 4	AK089326|Ccl4|20303|chemokine (C-C motif) ligand 4	AK154685|Ccl4|20303|chemokine (C-C motif) ligand 4	AK155053|Ccl4|20303|chemokine (C-C motif) ligand 4	M23503|Ccl4|20303|chemokine (C-C motif) ligand 4	AK156948|Ccl4|20303|chemokine (C-C motif) ligand 4	AK172472|Ccl4|20303|chemokine (C-C motif) ligand 4	M35590|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128218|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128219|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119257|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119259|Ccl4|20303|chemokine (C-C motif) ligand 4
mm9_v1_chr5_-_122017937_122018000	1.83589	CRX.p2	
mm9_v1_chr6_-_136730254_136730285	1.83016	CRX.p2	BC099968|Gucy2c|14917|guanylate cyclase 2c	NM_001127318|Gucy2c|14917|guanylate cyclase 2c	NM_145067|Gucy2c|14917|guanylate cyclase 2c	AK136496|Gucy2c|14917|guanylate cyclase 2c
mm9_v1_chr9_+_50665024_50665086	1.82805	CRX.p2	NM_001034085|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	NM_028614|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	BC056218|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK136106|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK077158|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK161392|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform
mm9_v1_chr14_+_26802490_26802490	1.82512	CRX.p2	BC055782|Duxbl|278672|double homeobox B-like	NM_001177538|Gm10394|100039227|predicted gene 10394	NM_001177539|Gm10391|100039293|predicted gene 10391	NM_183389|Duxbl|278672|double homeobox B-like
mm9_v1_chrX_+_39855629_39855874	1.82394	CRX.p2	AK042476|Sh2d1a|20400|SH2 domain protein 1A	AF072903|Sh2d1a|20400|SH2 domain protein 1A	AK040076|Sh2d1a|20400|SH2 domain protein 1A	NM_011364|Sh2d1a|20400|SH2 domain protein 1A	BC065390|Sh2d1a|20400|SH2 domain protein 1A	AF097632|Sh2d1a|20400|SH2 domain protein 1A	AF097633|Sh2d1a|20400|SH2 domain protein 1A	BC147367|Sh2d1a|20400|SH2 domain protein 1A	BC147368|Sh2d1a|20400|SH2 domain protein 1A
mm9_v1_chr8_+_107829500_107829543	1.81565	CRX.p2	BC018516|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	NM_172760|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	AK037067|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	AK157875|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	BC058752|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)	BC138887|Elmo3|234683|engulfment and cell motility 3, ced-12 homolog (C. elegans)
mm9_v1_chr10_+_127705052_127705052	1.81509	CRX.p2	NM_133997|Apof|103161|apolipoprotein F
mm9_v1_chr15_-_63743844_63743851	1.81402	CRX.p2	BC113153|Gsdmc2|331063|gasdermin C2	AK018537|Gsdmc4|74548|gasdermin C4	AK163061|Gsdmc4|74548|gasdermin C4	NM_028992|Gsdmc4|74548|gasdermin C4
mm9_v1_chr15_-_79723549_79723567	1.80881	CRX.p2	AK143849|D730005E14Rik|109361|RIKEN cDNA D730005E14 gene	AK035732|D730005E14Rik|109361|RIKEN cDNA D730005E14 gene
mm9_v1_chr16_+_48842663_48842722	1.80724	CRX.p2	AF323082|Retnla|57262|resistin like alpha	NM_020509|Retnla|57262|resistin like alpha	AK007553|Retnla|57262|resistin like alpha	AF316397|Retnla|57262|resistin like alpha
mm9_v1_chr13_-_59924405_59924507	1.80575	CRX.p2	BC043111|Zcchc6|214290|zinc finger, CCHC domain containing 6	AK031537|Zcchc6|214290|zinc finger, CCHC domain containing 6	NM_153538|Zcchc6|214290|zinc finger, CCHC domain containing 6
mm9_v1_chr9_-_7872896_7873169	1.80519	CRX.p2	AK172636|Birc3|11796|baculoviral IAP repeat-containing 3	BC011338|Birc3|11796|baculoviral IAP repeat-containing 3	U88908|Birc3|11796|baculoviral IAP repeat-containing 3	AK162108|Birc3|11796|baculoviral IAP repeat-containing 3	NM_007464|Birc3|11796|baculoviral IAP repeat-containing 3
mm9_v1_chr18_-_78375872_78375910	1.79751	CRX.p2	AF367359|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	NM_001110273|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2
mm9_v1_chr18_+_56559977_56560028	1.79647	CRX.p2	AK018551|Gramd3|107022|GRAM domain containing 3	BC057978|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr6_+_123072679_123072707	1.77844	CRX.p2	BC096565|Clec4a2|26888|C-type lectin domain family 4, member a2	NM_001170332|Clec4a2|26888|C-type lectin domain family 4, member a2
mm9_v1_chr15_-_98748371_98748661	1.77813	CRX.p2	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr12_+_21322219_21322285	1.76102	CRX.p2	BC060949|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK005287|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	NM_026347|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK011299|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK014743|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	BC087901|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_173697246_173697357	1.75855	CRX.p2	AK020012|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK156445|Slamf1|27218|signaling lymphocytic activation molecule family member 1	NM_013730|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK172138|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK037780|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK036429|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF160990|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149791|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149792|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117095|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117099|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196796|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196797|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196798|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196799|Slamf1|27218|signaling lymphocytic activation molecule family member 1
mm9_v1_chr1_+_83113340_83113380	1.75837	CRX.p2	AK079862|Ccl20|20297|chemokine (C-C motif) ligand 20	NM_001159738|Ccl20|20297|chemokine (C-C motif) ligand 20	NM_016960|Ccl20|20297|chemokine (C-C motif) ligand 20	AB015136|Ccl20|20297|chemokine (C-C motif) ligand 20	AF053313|Ccl20|20297|chemokine (C-C motif) ligand 20	AF099052|Ccl20|20297|chemokine (C-C motif) ligand 20	BC028504|Ccl20|20297|chemokine (C-C motif) ligand 20	AJ222694|Ccl20|20297|chemokine (C-C motif) ligand 20
mm9_v1_chr9_-_36540210_36540345	1.74235	CRX.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr4_+_140257340_140257464	1.74055	CRX.p2	NM_173867|Rcc2|108911|regulator of chromosome condensation 2	BC060624|Rcc2|108911|regulator of chromosome condensation 2	AK076040|Rcc2|108911|regulator of chromosome condensation 2	BC086666|Rcc2|108911|regulator of chromosome condensation 2
mm9_v1_chr5_-_114280434_114280521	1.74013	CRX.p2	AK089214|Selplg|20345|selectin, platelet (p-selectin) ligand	AK155762|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156933|Selplg|20345|selectin, platelet (p-selectin) ligand	AK158134|Selplg|20345|selectin, platelet (p-selectin) ligand	BC003874|Selplg|20345|selectin, platelet (p-selectin) ligand	AK172077|Selplg|20345|selectin, platelet (p-selectin) ligand	AK171693|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156551|Selplg|20345|selectin, platelet (p-selectin) ligand	AK089188|Selplg|20345|selectin, platelet (p-selectin) ligand	NM_009151|Selplg|20345|selectin, platelet (p-selectin) ligand
mm9_v1_chr15_+_9265318_9265338	1.73939	CRX.p2	AK143815|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2
mm9_v1_chr3_-_113094211_113094366	1.73371	CRX.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr1_-_141982814_141983012	1.72926	CRX.p2	AK075670|Cfh|12628|complement component factor h	M31980|Cfh|12628|complement component factor h
mm9_v1_chr7_+_109614267_109614297	1.71692	CRX.p2	AK200772|Rrm1|20133|ribonucleotide reductase M1	AK203165|Rrm1|20133|ribonucleotide reductase M1	AK209968|Rrm1|20133|ribonucleotide reductase M1	AK211974|Rrm1|20133|ribonucleotide reductase M1
mm9_v1_chr10_-_86470647_86470766	1.71683	CRX.p2	BC145110|Stab2|192188|stabilin 2	DQ786775|Stab2|192188|stabilin 2	AF364951|Stab2|192188|stabilin 2	NM_138673|Stab2|192188|stabilin 2	AK164675|Stab2|192188|stabilin 2
mm9_v1_chr17_+_75578120_75578285	1.71446	CRX.p2	AK036047|Ltbp1|268977|latent transforming growth factor beta binding protein 1	NM_206958|Ltbp1|268977|latent transforming growth factor beta binding protein 1	AF280604|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr11_-_70034477_70034547	1.71422	CRX.p2	AK028143|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	AK028759|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13	NM_172371|Slc16a13|69309|solute carrier family 16 (monocarboxylic acid transporters), member 13
mm9_v1_chr14_-_9091528_9091534	1.71248	CRX.p2	NM_053115|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr9_+_59387443_59387536	1.71104	CRX.p2	AK075911|Hexa|15211|hexosaminidase A	NM_010421|Hexa|15211|hexosaminidase A	AK168186|Hexa|15211|hexosaminidase A	AK159091|Hexa|15211|hexosaminidase A	U07631|Hexa|15211|hexosaminidase A	AK159814|Hexa|15211|hexosaminidase A	AK167013|Hexa|15211|hexosaminidase A	AK170903|Hexa|15211|hexosaminidase A	AK075895|Hexa|15211|hexosaminidase A	AK151960|Hexa|15211|hexosaminidase A	AK080777|Hexa|15211|hexosaminidase A	AK159890|Hexa|15211|hexosaminidase A	AK150444|Hexa|15211|hexosaminidase A	BC010755|Hexa|15211|hexosaminidase A	AK160112|Hexa|15211|hexosaminidase A	X64331|Hexa|15211|hexosaminidase A
mm9_v1_chr6_-_3444484_3444497	1.71039	CRX.p2	BC096374|Hepacam2|101202|HEPACAM family member 2	AK033728|Hepacam2|101202|HEPACAM family member 2	AK050501|Hepacam2|101202|HEPACAM family member 2	NM_178899|Hepacam2|101202|HEPACAM family member 2
mm9_v1_chr1_-_183112962_183112965	1.71007	CRX.p2	AK167017|Wdr26|226757|WD repeat domain 26	AK167116|Wdr26|226757|WD repeat domain 26
mm9_v1_chr9_+_119266498_119266759	1.70846	CRX.p2	AK143476|Xylb|102448|xylulokinase homolog (H. influenzae)	NM_001033209|Xylb|102448|xylulokinase homolog (H. influenzae)	BC138244|Xylb|102448|xylulokinase homolog (H. influenzae)	BC138247|Xylb|102448|xylulokinase homolog (H. influenzae)	AK170197|Xylb|102448|xylulokinase homolog (H. influenzae)	AK165440|Xylb|102448|xylulokinase homolog (H. influenzae)	AK165518|Xylb|102448|xylulokinase homolog (H. influenzae)	AK165759|Xylb|102448|xylulokinase homolog (H. influenzae)	AK164186|Xylb|102448|xylulokinase homolog (H. influenzae)	BC080743|Xylb|102448|xylulokinase homolog (H. influenzae)	BC025442|Xylb|102448|xylulokinase homolog (H. influenzae)
mm9_v1_chr4_-_129055102_129055140	1.70351	CRX.p2	BC017614|Zbtb8a|73680|zinc finger and BTB domain containing 8a
mm9_v1_chr18_+_44264117_44264290	1.70336	CRX.p2	DQ437332|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK136616|Spink12|78242|serine peptidase inhibitor, Kazal type 11	NM_030061|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK020352|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145914|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145916|Spink12|78242|serine peptidase inhibitor, Kazal type 11
mm9_v1_chr3_+_20008792_20008792	1.70336	CRX.p2	BC039796|Hltf|20585|helicase-like transcription factor
mm9_v1_chr1_-_196957466_196957592	1.70275	CRX.p2	M23446|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC092048|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC028945|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK134226|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr8_+_112515370_112515467	1.69245	CRX.p2	BC024264|Tat|234724|tyrosine aminotransferase
mm9_v1_chr2_+_13500271_13500328	1.68908	CRX.p2	AK181650|Vim|22352|vimentin	AK196009|Vim|22352|vimentin	AK197870|Vim|22352|vimentin	AK203908|Vim|22352|vimentin
mm9_v1_chr7_+_129210684_129210770	1.68617	CRX.p2	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr7_-_20218609_20218735	1.68595	CRX.p2	
mm9_v1_chr1_+_120524521_120524530	1.67984	CRX.p2	AK007654|Tcfcp2l1|81879|transcription factor CP2-like 1	NM_023755|Tcfcp2l1|81879|transcription factor CP2-like 1	AK143960|Tcfcp2l1|81879|transcription factor CP2-like 1	AF311309|Tcfcp2l1|81879|transcription factor CP2-like 1	BC116663|Tcfcp2l1|81879|transcription factor CP2-like 1
mm9_v1_chr11_-_98859189_98859196	1.6735	CRX.p2	U01915|Top2a|21973|topoisomerase (DNA) II alpha
mm9_v1_chr19_-_39887217_39887303	1.66917	CRX.p2	AF047727|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139471|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139472|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	NM_010004|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40
mm9_v1_chr10_-_75243786_75243866	1.66279	CRX.p2	BC003903|Gstt3|103140|glutathione S-transferase, theta 3	AK168226|Gstt3|103140|glutathione S-transferase, theta 3	AK138669|Gstt3|103140|glutathione S-transferase, theta 3	AK154161|Gstt3|103140|glutathione S-transferase, theta 3
mm9_v1_chr6_+_48854984_48854984	1.66202	CRX.p2	AK146078|Abp1|76507|amiloride binding protein 1 (amine oxidase, copper-containing)	NM_001161621|Abp1|76507|amiloride binding protein 1 (amine oxidase, copper-containing)	NM_001161622|Abp1|76507|amiloride binding protein 1 (amine oxidase, copper-containing)
mm9_v1_chr3_-_105970438_105970481	1.66191	CRX.p2	D87757|Chi3l3|12655|chitinase 3-like 3	M94584|Chi3l3|12655|chitinase 3-like 3	AK154420|Chi3l3|12655|chitinase 3-like 3	BC061154|Chi3l3|12655|chitinase 3-like 3	AK137503|Chi3l3|12655|chitinase 3-like 3	NM_009892|Chi3l3|12655|chitinase 3-like 3
mm9_v1_chr3_+_88940542_88940546	1.66084	CRX.p2	AK149508|Pklr|18770|pyruvate kinase liver and red blood cell	NM_001099779|Pklr|18770|pyruvate kinase liver and red blood cell	AK149524|Pklr|18770|pyruvate kinase liver and red blood cell
mm9_v1_chr15_-_96245209_96245211	1.65349	CRX.p2	AK219742|Scaf11|72193|SR-related CTD-associated factor 11
mm9_v1_chr11_-_114995194_114995307	1.6532	CRX.p2	AB292061|Cd300lf|246746|CD300 antigen like family member F	AY457047|Cd300lf|246746|CD300 antigen like family member F	AK154273|Cd300lf|246746|CD300 antigen like family member F	AY214460|Cd300lf|246746|CD300 antigen like family member F	AF251703|Cd300lf|246746|CD300 antigen like family member F	BC057864|Cd300lf|246746|CD300 antigen like family member F	AK089465|Cd300lf|246746|CD300 antigen like family member F	AK155367|Cd300lf|246746|CD300 antigen like family member F	AK089313|Cd300lf|246746|CD300 antigen like family member F	NM_001169153|Cd300lf|246746|CD300 antigen like family member F	NM_145634|Cd300lf|246746|CD300 antigen like family member F
mm9_v1_chr9_+_107482499_107482500	1.64899	CRX.p2	BC026545|Nat6|56441|N-acetyltransferase 6	NM_019750|Nat6|56441|N-acetyltransferase 6
mm9_v1_chr2_-_60511707_60511810	1.64812	CRX.p2	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr3_-_98697132_98697169	1.6464	CRX.p2	AK078908|Hao2|56185|hydroxyacid oxidase 2	AK018684|Hao2|56185|hydroxyacid oxidase 2	AK143991|Hao2|56185|hydroxyacid oxidase 2	AF272947|Hao2|56185|hydroxyacid oxidase 2	NM_019545|Hao2|56185|hydroxyacid oxidase 2
mm9_v1_chr5_+_90919739_90919752	1.64467	CRX.p2	NM_007423|Afp|11576|alpha fetoprotein
mm9_v1_chr11_+_4136787_4136837	1.64352	CRX.p2	NM_001013365|Osm|18413|oncostatin M	BC099866|Osm|18413|oncostatin M	AK155637|Osm|18413|oncostatin M
mm9_v1_chr16_-_13730474_13730677	1.64325	CRX.p2	AK076921|Pla2g10|26565|phospholipase A2, group X	AF210429|Pla2g10|26565|phospholipase A2, group X	BC028879|Pla2g10|26565|phospholipase A2, group X	AF166097|Pla2g10|26565|phospholipase A2, group X	NM_011987|Pla2g10|26565|phospholipase A2, group X
mm9_v1_chr7_-_148286422_148286499	1.64312	CRX.p2	BC094069|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	AK133518|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	AK145889|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	NM_023059|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
mm9_v1_chr10_-_126725826_126725958	1.6416	CRX.p2	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr3_-_90318178_90318313	1.64133	CRX.p2	AK017279|S100a1|20193|S100 calcium binding protein A1	AK168822|S100a1|20193|S100 calcium binding protein A1	AK002721|S100a1|20193|S100 calcium binding protein A1	AF087687|S100a1|20193|S100 calcium binding protein A1	AK012578|S100a1|20193|S100 calcium binding protein A1	NM_011309|S100a1|20193|S100 calcium binding protein A1	BC005590|S100a1|20193|S100 calcium binding protein A1
mm9_v1_chr11_-_46520600_46520613	1.64121	CRX.p2	NM_134249|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr10_+_7445797_7445835	1.63207	CRX.p2	AK012319|Katna1|23924|katanin p60 (ATPase-containing) subunit A1	NM_011835|Katna1|23924|katanin p60 (ATPase-containing) subunit A1	AK041900|Katna1|23924|katanin p60 (ATPase-containing) subunit A1	AF153197|Katna1|23924|katanin p60 (ATPase-containing) subunit A1
mm9_v1_chr6_+_129130632_129130672	1.624	CRX.p2	AY320031|Clec2d|93694|C-type lectin domain family 2, member d	AF321553|Clec2d|93694|C-type lectin domain family 2, member d	NM_053109|Clec2d|93694|C-type lectin domain family 2, member d	AF350409|Clec2d|93694|C-type lectin domain family 2, member d	BC106776|Clec2d|93694|C-type lectin domain family 2, member d
mm9_v1_chr8_+_34807688_34807718	1.62284	CRX.p2	AK027984|Gsr|14782|glutathione reductase
mm9_v1_chr14_+_27081743_27081743	1.61942	CRX.p2	BC055782|Duxbl|278672|double homeobox B-like	NM_001177538|Gm10394|100039227|predicted gene 10394	NM_001177539|Gm10391|100039293|predicted gene 10391	NM_183389|Duxbl|278672|double homeobox B-like
mm9_v1_chr7_-_4473916_4474040	1.61578	CRX.p2	U09181|Tnni3|21954|troponin I, cardiac 3	BC100590|Tnni3|21954|troponin I, cardiac 3
mm9_v1_chr7_-_4474044_4474047	1.61547	CRX.p2	AK169223|Tnni3|21954|troponin I, cardiac 3	BC061171|Tnni3|21954|troponin I, cardiac 3	NM_009406|Tnni3|21954|troponin I, cardiac 3
mm9_v1_chr11_+_99725789_99725789	1.60377	CRX.p2	AK017437|Gm11559|100415785|predicted gene 11559	NM_001177484|Gm11559|100415785|predicted gene 11559
mm9_v1_chr17_-_34999458_34999467	1.5943	CRX.p2	NM_001142706|Cfb|14962|complement factor B	NM_008198|Cfb|14962|complement factor B
mm9_v1_chrX_-_35772763_35772868	1.58628	CRX.p2	
mm9_v1_chr4_-_132313025_132313152	1.58009	CRX.p2	AK166253|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	BC009087|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	NM_133888|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	AK154599|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B
mm9_v1_chr2_+_14151018_14151088	1.57314	CRX.p2	NM_008625|Mrc1|17533|mannose receptor, C type 1	Z11974|Mrc1|17533|mannose receptor, C type 1	BC141338|Mrc1|17533|mannose receptor, C type 1
mm9_v1_chr16_+_95479164_95479384	1.57302	CRX.p2	AK165436|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	AK165346|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	NM_001039056|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	NM_001039057|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	NM_019664|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	AJ012368|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	BC010794|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	BC057915|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15
mm9_v1_chr8_+_68910191_68910205	1.57079	CRX.p2	AK036489|March1|72925|membrane-associated ring finger (C3HC4) 1	AK089040|March1|72925|membrane-associated ring finger (C3HC4) 1	AK152592|March1|72925|membrane-associated ring finger (C3HC4) 1	AK163081|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166375|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr19_+_32694494_32694583	1.56576	CRX.p2	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr14_+_64479167_64479265	1.56489	CRX.p2	AK012057|Pinx1|72400|PIN2/TERF1 interacting, telomerase inhibitor 1	AF321817|Pinx1|72400|PIN2/TERF1 interacting, telomerase inhibitor 1	BC115636|Pinx1|72400|PIN2/TERF1 interacting, telomerase inhibitor 1	BC115637|Pinx1|72400|PIN2/TERF1 interacting, telomerase inhibitor 1	BC065781|Pinx1|72400|PIN2/TERF1 interacting, telomerase inhibitor 1	AF421879|Pinx1|72400|PIN2/TERF1 interacting, telomerase inhibitor 1
mm9_v1_chr7_+_3293008_3293247	1.56251	CRX.p2	NM_001093766|Myadm|50918|myeloid-associated differentiation marker	BC119364|Myadm|50918|myeloid-associated differentiation marker	BC119368|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr8_+_87550720_87550841	1.55816	CRX.p2	BC023284|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	BC029622|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	NM_026760|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	AK009653|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene	AK003299|2310036O22Rik|68544|RIKEN cDNA 2310036O22 gene
mm9_v1_chr1_+_133535033_133535043	1.55804	CRX.p2	AK145875|Ctse|13034|cathepsin E
mm9_v1_chr4_-_46579311_46579311	1.55686	CRX.p2	AK030097|Coro2a|107684|coronin, actin binding protein 2A	NM_178893|Coro2a|107684|coronin, actin binding protein 2A
mm9_v1_chr10_+_32803288_32803366	1.55174	CRX.p2	NM_029726|Trdn|76757|triadin	AK009816|Trdn|76757|triadin	AF223415|Trdn|76757|triadin	AF223416|Trdn|76757|triadin	BC034343|Trdn|76757|triadin	AF223417|Trdn|76757|triadin
mm9_v1_chr3_-_37024751_37024880	1.54548	CRX.p2	U41504|Il2|16183|interleukin 2	DQ836354|Il2|16183|interleukin 2	U41494|Il2|16183|interleukin 2	U41505|Il2|16183|interleukin 2	U41506|Il2|16183|interleukin 2	AY147902|Il2|16183|interleukin 2	X66058|Il2|16183|interleukin 2	AF065914|Il2|16183|interleukin 2	AF065915|Il2|16183|interleukin 2	AF065916|Il2|16183|interleukin 2	BC116845|Il2|16183|interleukin 2	BC116873|Il2|16183|interleukin 2	X01772|Il2|16183|interleukin 2	X73040|Il2|16183|interleukin 2	K02292|Il2|16183|interleukin 2	NM_008366|Il2|16183|interleukin 2	AF538059|Il2|16183|interleukin 2	AF542383|Il2|16183|interleukin 2	AF542384|Il2|16183|interleukin 2	AF542385|Il2|16183|interleukin 2
mm9_v1_chr14_-_70748237_70748239	1.54502	CRX.p2	AK090193|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AK050076|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135152|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr13_-_60998747_60998807	1.53814	CRX.p2	AY034578|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	X15592|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	AK150917|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_001145801|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_007797|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta
mm9_v1_chr6_-_113385745_113385755	1.53668	CRX.p2	AK080133|Cidec|14311|cell death-inducing DFFA-like effector c	NM_178373|Cidec|14311|cell death-inducing DFFA-like effector c	M61737|Cidec|14311|cell death-inducing DFFA-like effector c
mm9_v1_chr15_-_58220798_58220828	1.53233	CRX.p2	BC013521|Anxa13|69787|annexin A13	AJ306451|Anxa13|69787|annexin A13	NM_027211|Anxa13|69787|annexin A13
mm9_v1_chr2_-_44968508_44968606	1.53073	CRX.p2	AK158309|Zeb2|24136|zinc finger E-box binding homeobox 2	AK157561|Zeb2|24136|zinc finger E-box binding homeobox 2	BC060699|Zeb2|24136|zinc finger E-box binding homeobox 2	AK135557|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr11_-_54769546_54769594	1.52913	CRX.p2	BC008186|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr5_-_145891052_145891100	1.52439	CRX.p2	AK177019|Pdap1|231887|PDGFA associated protein 1
mm9_v1_chr16_-_10313924_10313944	1.52387	CRX.p2	AF083876|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr3_-_95799554_95799856	1.52051	CRX.p2	AF168675|Plekho1|67220|pleckstrin homology domain containing, family O member 1	NM_023320|Plekho1|67220|pleckstrin homology domain containing, family O member 1	BC117003|Plekho1|67220|pleckstrin homology domain containing, family O member 1	BC125441|Plekho1|67220|pleckstrin homology domain containing, family O member 1	AK014374|Plekho1|67220|pleckstrin homology domain containing, family O member 1
mm9_v1_chr15_-_101723333_101723350	1.51942	CRX.p2	AK009075|Krt76|77055|keratin 76	AK036802|Krt76|77055|keratin 76	AK137676|Krt76|77055|keratin 76	NM_001033177|Krt76|77055|keratin 76
mm9_v1_chr14_+_56179739_56179780	1.50912	CRX.p2	NM_001199009|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK150183|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr9_-_105372402_105372478	1.50464	CRX.p2	AK209035|Atp2c1|235574|ATPase, Ca++-sequestering	AK173154|Atp2c1|235574|ATPase, Ca++-sequestering	AJ551270|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr8_-_87186691_87186755	1.50252	CRX.p2	AK172332|Ier2|15936|immediate early response 2	BC002067|Ier2|15936|immediate early response 2	AK170433|Ier2|15936|immediate early response 2	AK032692|Ier2|15936|immediate early response 2	AK144601|Ier2|15936|immediate early response 2	AK150860|Ier2|15936|immediate early response 2	AK152747|Ier2|15936|immediate early response 2	M31042|Ier2|15936|immediate early response 2	NM_010499|Ier2|15936|immediate early response 2	M59821|Ier2|15936|immediate early response 2
mm9_v1_chr17_-_28502087_28502126	1.50105	CRX.p2	NM_021478|Tulp1|22157|tubby like protein 1	BC014820|Tulp1|22157|tubby like protein 1	BC029222|Tulp1|22157|tubby like protein 1
mm9_v1_chr5_-_91069499_91069680	1.50104	CRX.p2	AK005472|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	AK132288|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	NM_028478|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	BC031808|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6
mm9_v1_chr7_+_17366682_17366755	1.49911	CRX.p2	AK148346|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	NM_009201|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK157838|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	L42115|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	D85044|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5
mm9_v1_chr13_+_63116293_63116526	1.49655	CRX.p2	AK141931|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	NM_028079|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC141279|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	AJ810420|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene
mm9_v1_chr8_+_74134884_74135109	1.49413	CRX.p2	BC032165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK036165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	NM_146211|Glt25d1|234407|glycosyltransferase 25 domain containing 1	BC056951|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK035788|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK076103|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK029433|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK154775|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr14_-_56377260_56377270	1.49186	CRX.p2	NM_009894|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr3_+_145784635_145784876	1.49098	CRX.p2	AK030819|Mcoln3|171166|mucolipin 3	AK035029|Mcoln3|171166|mucolipin 3	AK033008|Mcoln3|171166|mucolipin 3	AF475086|Mcoln3|171166|mucolipin 3	BC106856|Mcoln3|171166|mucolipin 3	BC106857|Mcoln3|171166|mucolipin 3	NM_134160|Mcoln3|171166|mucolipin 3	AY083531|Mcoln3|171166|mucolipin 3	AK191060|Mcoln3|171166|mucolipin 3	AK202150|Mcoln3|171166|mucolipin 3
mm9_v1_chr5_+_104754347_104754401	1.48889	CRX.p2	AF298661|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	NM_053172|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158231|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158330|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AF314964|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	BC119162|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)
mm9_v1_chr16_-_57071458_57071484	1.48652	CRX.p2	AK009173|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	NM_183281|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	BC150914|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	BC150924|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	BC172084|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene	AK036849|2310005G13Rik|69457|RIKEN cDNA 2310005G13 gene
mm9_v1_chr6_+_115894955_115894978	1.48203	CRX.p2	AK135944|H1foo|171506|H1 histone family, member O, oocyte-specific	AK165127|H1foo|171506|H1 histone family, member O, oocyte-specific	AY007195|H1foo|171506|H1 histone family, member O, oocyte-specific	NM_138311|H1foo|171506|H1 histone family, member O, oocyte-specific	AK162154|H1foo|171506|H1 histone family, member O, oocyte-specific	BC137916|H1foo|171506|H1 histone family, member O, oocyte-specific	BC145046|H1foo|171506|H1 histone family, member O, oocyte-specific	AK162137|H1foo|171506|H1 histone family, member O, oocyte-specific
mm9_v1_chr7_-_16844541_16844615	1.48169	CRX.p2	AK158027|C5ar1|12273|complement component 5a receptor 1
mm9_v1_chr13_-_61671425_61671484	1.48099	CRX.p2	AY034574|Cts3|117066|cathepsin 3	NM_026906|Cts3|117066|cathepsin 3	BC099388|Cts3|117066|cathepsin 3	AK005389|Cts3|117066|cathepsin 3
mm9_v1_chr12_+_3426820_3426856	1.47882	CRX.p2	AK148015|Asxl2|75302|additional sex combs like 2 (Drosophila)
mm9_v1_chr18_-_75099989_75100046	1.47045	CRX.p2	AK014047|Lipg|16891|lipase, endothelial
mm9_v1_chr9_+_46048812_46048926	1.46929	CRX.p2	NM_007468|Apoa4|11808|apolipoprotein A-IV
mm9_v1_chr14_+_99697896_99697918	1.46848	CRX.p2	AK051409|Klf5|12224|Kruppel-like factor 5	NM_009769|Klf5|12224|Kruppel-like factor 5	BC011307|Klf5|12224|Kruppel-like factor 5	BC012958|Klf5|12224|Kruppel-like factor 5
mm9_v1_chr10_-_80986969_80986969	1.46685	CRX.p2	BC005439|Gna15|14676|guanine nucleotide binding protein, alpha 15	NM_010304|Gna15|14676|guanine nucleotide binding protein, alpha 15
mm9_v1_chr14_-_9091396_9091464	1.46677	CRX.p2	AK144243|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain	AJ238492|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr10_-_119913990_119913990	1.46047	CRX.p2	NM_010441|Hmga2|15364|high mobility group AT-hook 2
mm9_v1_chr17_+_34047186_34047373	1.44681	CRX.p2	AF006040|Daxx|13163|Fas death domain-associated protein
mm9_v1_chrX_-_104035877_104035981	1.44468	CRX.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr10_+_79348991_79349057	1.44457	CRX.p2	BC145800|Elane|50701|elastase, neutrophil expressed	AK143710|Elane|50701|elastase, neutrophil expressed	NM_015779|Elane|50701|elastase, neutrophil expressed
mm9_v1_chr18_+_54113094_54113152	1.43822	CRX.p2	AJ279839|Csnk1g3|70425|casein kinase 1, gamma 3
mm9_v1_chr1_-_54983048_54983087	1.43545	CRX.p2	BC157918|Ankrd44|329154|ankyrin repeat domain 44	BC157951|Ankrd44|329154|ankyrin repeat domain 44	BC172102|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr9_+_21142267_21142297	1.43454	CRX.p2	AK166695|Slc44a2|68682|solute carrier family 44, member 2	AK048648|Slc44a2|68682|solute carrier family 44, member 2	BC031535|Slc44a2|68682|solute carrier family 44, member 2	NM_152808|Slc44a2|68682|solute carrier family 44, member 2
mm9_v1_chr3_+_41368846_41368849	1.42886	CRX.p2	AK129445|Phf17|269424|PHD finger protein 17
mm9_v1_chr7_-_140206929_140206929	1.4288	CRX.p2	NM_001170744|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr14_-_69200119_69200151	1.42348	CRX.p2	BC046324|Adamdec1|58860|ADAM-like, decysin 1	AJ242912|Adamdec1|58860|ADAM-like, decysin 1	NM_021475|Adamdec1|58860|ADAM-like, decysin 1	AK156586|Adamdec1|58860|ADAM-like, decysin 1	BC026542|Adamdec1|58860|ADAM-like, decysin 1
mm9_v1_chr9_-_61918412_61918412	1.41975	CRX.p2	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr3_-_88138354_88138379	1.41889	CRX.p2	AK009760|Tmem79|71913|transmembrane protein 79	NM_024246|Tmem79|71913|transmembrane protein 79
mm9_v1_chr16_+_32179885_32179885	1.41632	CRX.p2	AK157452|Bex6|328660|brain expressed gene 6	AY833559|Bex6|328660|brain expressed gene 6	NM_001033539|Bex6|328660|brain expressed gene 6
mm9_v1_chr4_+_151699834_151699937	1.41596	CRX.p2	BC096390|Rpl22|19934|ribosomal protein L22
mm9_v1_chr16_-_19884312_19884367	1.41261	CRX.p2	BC053981|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene	AK153879|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene	AK086168|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene
mm9_v1_chr9_-_37063214_37063322	1.41059	CRX.p2	AF121081|Slc37a2|56857|solute carrier family 37 (glycerol-3-phosphate transporter), member 2	AK031045|Slc37a2|56857|solute carrier family 37 (glycerol-3-phosphate transporter), member 2	AK079823|Slc37a2|56857|solute carrier family 37 (glycerol-3-phosphate transporter), member 2	NM_001145960|Slc37a2|56857|solute carrier family 37 (glycerol-3-phosphate transporter), member 2	NM_020258|Slc37a2|56857|solute carrier family 37 (glycerol-3-phosphate transporter), member 2
mm9_v1_chr7_-_127038916_127038971	1.40933	CRX.p2	AK029043|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	NM_173408|Dcun1d3|233805|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm9_v1_chr19_+_44567961_44568029	1.40845	CRX.p2	AK050992|Wnt8b|22423|wingless related MMTV integration site 8b	NM_011720|Wnt8b|22423|wingless related MMTV integration site 8b	AF130349|Wnt8b|22423|wingless related MMTV integration site 8b	BC119544|Wnt8b|22423|wingless related MMTV integration site 8b
mm9_v1_chr17_+_46298055_46298112	1.40202	CRX.p2	AK148020|Gtpbp2|56055|GTP binding protein 2	AK087511|Gtpbp2|56055|GTP binding protein 2	AF168991|Gtpbp2|56055|GTP binding protein 2	AK008731|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chr4_+_125701902_125702025	1.40133	CRX.p2	AK144318|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	NM_007782|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	AK089305|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	M58288|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC115865|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC116635|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)
mm9_v1_chr2_+_129442079_129442192	1.39915	CRX.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr17_+_35404109_35404141	1.39778	CRX.p2	
mm9_v1_chr19_-_32177613_32177629	1.39494	CRX.p2	BC137898|Asah2|54447|N-acylsphingosine amidohydrolase 2	BC145016|Asah2|54447|N-acylsphingosine amidohydrolase 2	AB037181|Asah2|54447|N-acylsphingosine amidohydrolase 2	NM_018830|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr6_-_117887352_117887354	1.39093	CRX.p2	AK018728|Fxyd4|108017|FXYD domain-containing ion transport regulator 4	AK054004|Fxyd4|108017|FXYD domain-containing ion transport regulator 4	NM_001173372|Fxyd4|108017|FXYD domain-containing ion transport regulator 4	NM_033648|Fxyd4|108017|FXYD domain-containing ion transport regulator 4
mm9_v1_chr14_-_56377278_56377296	1.39014	CRX.p2	AK003968|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr10_-_92185071_92185164	1.37897	CRX.p2	BC066870|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	D10712|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK090040|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK048393|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK085355|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	BC052430|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK010591|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	NM_008682|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK153746|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1
mm9_v1_chr14_+_18814157_18814390	1.37079	CRX.p2	BC089035|Thrb|21834|thyroid hormone receptor beta	NM_009380|Thrb|21834|thyroid hormone receptor beta	BC119553|Thrb|21834|thyroid hormone receptor beta	BC119552|Thrb|21834|thyroid hormone receptor beta	S62758|Thrb|21834|thyroid hormone receptor beta	AB221613|Thrb|21834|thyroid hormone receptor beta
mm9_v1_chr7_-_126602780_126602785	1.35872	CRX.p2	BC119573|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009323|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009843|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009661|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	NM_025989|Gp2|67133|glycoprotein 2 (zymogen granule membrane)
mm9_v1_chr16_+_93832365_93832557	1.35328	CRX.p2	AK172896|Morc3|338467|microrchidia 3	NM_001045529|Morc3|338467|microrchidia 3	BC145705|Morc3|338467|microrchidia 3	AK144885|Morc3|338467|microrchidia 3	AK132226|Morc3|338467|microrchidia 3	BC098072|Morc3|338467|microrchidia 3
mm9_v1_chr17_+_6429315_6429355	1.35319	CRX.p2	BC089472|Dynlt1b|21648|dynein light chain Tctex-type 1D	AK088224|Dynlt1b|21648|dynein light chain Tctex-type 1D	AK153971|Dynlt1b|21648|dynein light chain Tctex-type 1D	AK133788|Dynlt1b|21648|dynein light chain Tctex-type 1D
mm9_v1_chr1_+_157887985_157888091	1.34894	CRX.p2	NM_001160181|Tor1aip2|240832|torsin A interacting protein 2	NM_022329|Tor1aip2|240832|torsin A interacting protein 2	AK152137|Tor1aip2|240832|torsin A interacting protein 2	AK080959|Tor1aip2|240832|torsin A interacting protein 2	AK150303|Tor1aip2|240832|torsin A interacting protein 2	AK151453|Tor1aip2|240832|torsin A interacting protein 2	AJ251363|Tor1aip2|240832|torsin A interacting protein 2	BC064017|Tor1aip2|240832|torsin A interacting protein 2	BC092059|Tor1aip2|240832|torsin A interacting protein 2	AK216254|Tor1aip2|240832|torsin A interacting protein 2	BC039927|Tor1aip2|240832|torsin A interacting protein 2	AK003852|Tor1aip2|240832|torsin A interacting protein 2	AK032697|Tor1aip2|240832|torsin A interacting protein 2	BC053726|Tor1aip2|240832|torsin A interacting protein 2	AK182358|Tor1aip2|240832|torsin A interacting protein 2	AK203799|Tor1aip2|240832|torsin A interacting protein 2	AK212068|Tor1aip2|240832|torsin A interacting protein 2	AK212760|Tor1aip2|240832|torsin A interacting protein 2	AK214292|Tor1aip2|240832|torsin A interacting protein 2	AK218632|Tor1aip2|240832|torsin A interacting protein 2	AK219881|Tor1aip2|240832|torsin A interacting protein 2	AK177027|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr16_+_23609986_23610176	1.34769	CRX.p2	NM_023386|Rtp4|67775|receptor transporter protein 4	AK018021|Rtp4|67775|receptor transporter protein 4	AJ251364|Rtp4|67775|receptor transporter protein 4	AK007477|Rtp4|67775|receptor transporter protein 4	BC024872|Rtp4|67775|receptor transporter protein 4	AY562228|Rtp4|67775|receptor transporter protein 4
mm9_v1_chr14_+_22569752_22569797	1.34187	CRX.p2	AK006211|Samd8|67630|sterile alpha motif domain containing 8	NM_026283|Samd8|67630|sterile alpha motif domain containing 8	BC116745|Samd8|67630|sterile alpha motif domain containing 8	BC116747|Samd8|67630|sterile alpha motif domain containing 8	AK015593|Samd8|67630|sterile alpha motif domain containing 8	BC100476|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr17_+_47047407_47047438	1.34047	CRX.p2	AK136280|Prph2|19133|peripherin 2	AK044549|Prph2|19133|peripherin 2	NM_008938|Prph2|19133|peripherin 2	X14770|Prph2|19133|peripherin 2	BC085266|Prph2|19133|peripherin 2	BC028958|Prph2|19133|peripherin 2
mm9_v1_chrX_+_83115611_83115703	1.33907	CRX.p2	NM_001163539|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK155591|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK154689|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene
mm9_v1_chr11_+_69867869_69867875	1.33783	CRX.p2	NM_009714|Asgr1|11889|asialoglycoprotein receptor 1
mm9_v1_chr6_+_41471774_41471798	1.33629	CRX.p2	NM_009430|Prss2|22072|protease, serine, 2	AK003082|Prss2|22072|protease, serine, 2	X04574|Prss2|22072|protease, serine, 2	BC064796|Prss2|22072|protease, serine, 2
mm9_v1_chr10_+_38853828_38853873	1.33406	CRX.p2	AK148039|Tube1|71924|epsilon-tubulin 1	NM_028006|Tube1|71924|epsilon-tubulin 1	BC062179|Tube1|71924|epsilon-tubulin 1	AK039886|Tube1|71924|epsilon-tubulin 1	AK010005|Tube1|71924|epsilon-tubulin 1	AK041416|Tube1|71924|epsilon-tubulin 1	AK087403|Tube1|71924|epsilon-tubulin 1
mm9_v1_chr9_+_69843263_69843284	1.33294	CRX.p2	AF400107|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591757|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AY591758|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_001008238|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr8_-_22566988_22566988	1.32909	CRX.p2	NM_001177518|Gm7849|665927|predicted gene 7849	NM_001177526|Gm7861|665956|predicted gene 7861
mm9_v1_chr9_+_35259660_35259661	1.32843	CRX.p2	AF090866|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	NM_021339|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	BC109176|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes
mm9_v1_chr6_-_41586296_41586345	1.32748	CRX.p2	AB037373|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	BC016101|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	AK077234|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6
mm9_v1_chr6_-_72382855_72382865	1.32294	CRX.p2	
mm9_v1_chr7_-_116867284_116867363	1.31959	CRX.p2	BC051019|BC051019|57355|cDNA sequence BC051019	NM_001040700|BC051019|57355|cDNA sequence BC051019	AK143006|BC051019|57355|cDNA sequence BC051019
mm9_v1_chr3_+_69026340_69026379	1.31736	CRX.p2	AK018621|Arl14|71619|ADP-ribosylation factor-like 14	NM_027843|Arl14|71619|ADP-ribosylation factor-like 14	BC104368|Arl14|71619|ADP-ribosylation factor-like 14	BC104369|Arl14|71619|ADP-ribosylation factor-like 14
mm9_v1_chr4_+_122366510_122366517	1.31561	CRX.p2	AF319955|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene
mm9_v1_chr19_+_39188387_39188399	1.30866	CRX.p2	AY227734|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	NM_001011707|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	BC147819|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	BC147824|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	AK008512|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66
mm9_v1_chr2_-_130889549_130889549	1.30744	CRX.p2	AB059632|Adam33|110751|a disintegrin and metallopeptidase domain 33	AB059633|Adam33|110751|a disintegrin and metallopeptidase domain 33	NM_001163529|Adam33|110751|a disintegrin and metallopeptidase domain 33	NM_033615|Adam33|110751|a disintegrin and metallopeptidase domain 33
mm9_v1_chr9_-_70452528_70452545	1.30726	CRX.p2	AK041072|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr9_+_119250591_119250600	1.30627	CRX.p2	BC012400|Acaa1a|113868|acetyl-Coenzyme A acyltransferase 1A
mm9_v1_chr11_-_121090513_121090656	1.30513	CRX.p2	BC026616|BC017643|217370|cDNA sequence BC017643	AK158402|BC017643|217370|cDNA sequence BC017643	AK170767|BC017643|217370|cDNA sequence BC017643	BC017643|BC017643|217370|cDNA sequence BC017643	NM_144832|BC017643|217370|cDNA sequence BC017643	AK159453|BC017643|217370|cDNA sequence BC017643	AK168104|BC017643|217370|cDNA sequence BC017643	BC027406|BC017643|217370|cDNA sequence BC017643	AK145884|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr6_-_48522636_48522644	1.29856	CRX.p2	BC015275|Rarres2|71660|retinoic acid receptor responder (tazarotene induced) 2
mm9_v1_chr2_+_172294281_172294299	1.29564	CRX.p2	AK182599|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr9_-_109306800_109306809	1.29106	CRX.p2	BC084593|Fbxw22|382156|F-box and WD-40 domain protein 22	AK135808|Fbxw22|382156|F-box and WD-40 domain protein 22	NM_001014395|Fbxw22|382156|F-box and WD-40 domain protein 22
mm9_v1_chr15_+_99223377_99223451	1.28815	CRX.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr6_+_42211957_42211968	1.28472	CRX.p2	AK053212|Tmem139|109218|transmembrane protein 139	NM_175408|Tmem139|109218|transmembrane protein 139
mm9_v1_chr6_-_128476708_128476738	1.28376	CRX.p2	M93264|Pzp|11287|pregnancy zone protein	NM_007376|Pzp|11287|pregnancy zone protein
mm9_v1_chr6_+_117850357_117850357	1.28326	CRX.p2	NM_001166432|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr2_+_164773719_164773750	1.28271	CRX.p2	D12712|Mmp9|17395|matrix metallopeptidase 9	AK142787|Mmp9|17395|matrix metallopeptidase 9	AK159292|Mmp9|17395|matrix metallopeptidase 9	AK161176|Mmp9|17395|matrix metallopeptidase 9	Z27231|Mmp9|17395|matrix metallopeptidase 9	AK004651|Mmp9|17395|matrix metallopeptidase 9	BC046991|Mmp9|17395|matrix metallopeptidase 9	NM_013599|Mmp9|17395|matrix metallopeptidase 9
mm9_v1_chr18_-_35899651_35899795	1.28071	CRX.p2	AK172314|Tmem173|72512|transmembrane protein 173
mm9_v1_chr8_+_77591417_77591420	1.27415	CRX.p2	AK181519|Tom1|21968|target of myb1 homolog (chicken)	AK214667|Tom1|21968|target of myb1 homolog (chicken)
mm9_v1_chr2_+_165818161_165818181	1.27294	CRX.p2	BC086482|Ncoa3|17979|nuclear receptor coactivator 3
mm9_v1_chr8_-_95655156_95655184	1.2723	CRX.p2	AF034435|Ces1c|13884|carboxylesterase 1C	BC028907|Ces1c|13884|carboxylesterase 1C	M57960|Ces1c|13884|carboxylesterase 1C	AK050444|Ces1c|13884|carboxylesterase 1C	NM_007954|Ces1c|13884|carboxylesterase 1C
mm9_v1_chr14_-_56377231_56377254	1.27011	CRX.p2	AF041377|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B	BC046340|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr19_-_40148300_40148333	1.26825	CRX.p2	NM_206537|Cyp2c54|404195|cytochrome P450, family 2, subfamily c, polypeptide 54
mm9_v1_chr3_+_92169108_92169139	1.2666	CRX.p2	AY158990|Sprr2f|20760|small proline-rich protein 2F	NM_011472|Sprr2f|20760|small proline-rich protein 2F	BC120756|Sprr2f|20760|small proline-rich protein 2F	BC120758|Sprr2f|20760|small proline-rich protein 2F
mm9_v1_chr11_-_99496366_99496397	1.2641	CRX.p2	BC140967|Krtap4-2|68673|keratin associated protein 4-2	AK004055|Krtap4-2|68673|keratin associated protein 4-2	NM_026807|Krtap4-2|68673|keratin associated protein 4-2
mm9_v1_chr16_+_36156891_36156920	1.26403	CRX.p2	AK050597|Stfa2l1|268885|stefin A2 like 1	NM_173869|Stfa2l1|268885|stefin A2 like 1	BC117052|Stfa2l1|268885|stefin A2 like 1	BC119354|Stfa2l1|268885|stefin A2 like 1	AY163161|Stfa2l1|268885|stefin A2 like 1
mm9_v1_chr10_-_80555389_80555406	1.26228	CRX.p2	BC010786|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr11_-_106860803_106860838	1.26171	CRX.p2	NM_010655|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr10_+_52111413_52111541	1.2605	CRX.p2	AK017780|Nepn|66650|nephrocan	AY938536|Nepn|66650|nephrocan	NM_025684|Nepn|66650|nephrocan	AK017656|Nepn|66650|nephrocan	BC132046|Nepn|66650|nephrocan	BC132048|Nepn|66650|nephrocan	AK017842|Nepn|66650|nephrocan
mm9_v1_chr2_+_129926129_129926206	1.26027	CRX.p2	AK139778|AU015228|99169|expressed sequence AU015228	AK163392|AU015228|99169|expressed sequence AU015228	NM_001033197|AU015228|99169|expressed sequence AU015228	BC150906|AU015228|99169|expressed sequence AU015228
mm9_v1_chr10_-_126532862_126532974	1.26007	CRX.p2	
mm9_v1_chr7_+_147433182_147433279	1.25894	CRX.p2	AK030813|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	AK040624|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_175533|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	BC139294|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	EF624462|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_001128146|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	EF624463|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene	NM_001128145|5830411N06Rik|244234|RIKEN cDNA 5830411N06 gene
mm9_v1_chr2_+_87366184_87366358	1.25036	CRX.p2	BC090254|Srp9|27058|signal recognition particle 9
mm9_v1_chr3_-_108707417_108707441	1.24092	CRX.p2	AK007374|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr10_-_80555271_80555374	1.23764	CRX.p2	AK050186|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	AF392874|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	BC028820|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr11_+_100488707_100488855	1.23502	CRX.p2	AK201688|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2
mm9_v1_chr19_+_37624879_37624965	1.23232	CRX.p2	AK151524|Exoc6|107371|exocyst complex component 6	AK151838|Exoc6|107371|exocyst complex component 6	NM_175353|Exoc6|107371|exocyst complex component 6	AK082881|Exoc6|107371|exocyst complex component 6	BC026859|Exoc6|107371|exocyst complex component 6
mm9_v1_chr1_+_140864297_140864301	1.22984	CRX.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr2_+_122573644_122573786	1.22848	CRX.p2	
mm9_v1_chr16_-_76288569_76288581	1.22541	CRX.p2	BC062260|Nrip1|268903|nuclear receptor interacting protein 1
mm9_v1_chrX_-_3995572_3995572	1.22402	CRX.p2	NM_001085554|Gm10922|668964|predicted gene 10922
mm9_v1_chr6_-_13821449_13821517	1.22286	CRX.p2	BC070405|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK002763|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK011259|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK035027|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK136158|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK028169|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene	AK152937|2610001J05Rik|66520|RIKEN cDNA 2610001J05 gene
mm9_v1_chr4_-_41685498_41685535	1.22136	CRX.p2	
mm9_v1_chr15_+_72920827_72920871	1.21902	CRX.p2	AK010812|Chrac1|93696|chromatin accessibility complex 1	NM_053068|Chrac1|93696|chromatin accessibility complex 1	BC061043|Chrac1|93696|chromatin accessibility complex 1	AK134403|Chrac1|93696|chromatin accessibility complex 1	AF230805|Chrac1|93696|chromatin accessibility complex 1	BC016593|Chrac1|93696|chromatin accessibility complex 1
mm9_v1_chr6_+_41252267_41252289	1.21681	CRX.p2	AK003064|Try4|22074|trypsin 4	AK008660|Try4|22074|trypsin 4	AK008667|Try4|22074|trypsin 4	BC061135|Try4|22074|trypsin 4	NM_011646|Try4|22074|trypsin 4	BC050120|Try4|22074|trypsin 4
mm9_v1_chr8_-_22704936_22704936	1.21666	CRX.p2	NM_001177518|Gm7849|665927|predicted gene 7849	NM_001177526|Gm7861|665956|predicted gene 7861
mm9_v1_chr16_-_88896693_88896694	1.21475	CRX.p2	NM_010676|Krtap8-2|16704|keratin associated protein 8-2	D86422|Krtap8-2|16704|keratin associated protein 8-2
mm9_v1_chr6_-_71094313_71094369	1.21457	CRX.p2	BC025604|Thnsl2|232078|threonine synthase-like 2 (bacterial)	BC051244|Thnsl2|232078|threonine synthase-like 2 (bacterial)	AK165463|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_001033929|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_178413|Thnsl2|232078|threonine synthase-like 2 (bacterial)
mm9_v1_chr11_-_54769601_54769632	1.2129	CRX.p2	AK135338|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr17_-_36779586_36779610	1.21238	CRX.p2	BC106996|H2-M9|14997|histocompatibility 2, M region locus 9	AF469488|H2-M9|14997|histocompatibility 2, M region locus 9	AF539595|H2-M9|14997|histocompatibility 2, M region locus 9	NM_008205|H2-M9|14997|histocompatibility 2, M region locus 9	AK080256|H2-M9|14997|histocompatibility 2, M region locus 9
mm9_v1_chr11_-_76577056_76577075	1.21131	CRX.p2	BC008542|Gosr1|53334|golgi SNAP receptor complex member 1	NM_016810|Gosr1|53334|golgi SNAP receptor complex member 1	AK134515|Gosr1|53334|golgi SNAP receptor complex member 1	AK133836|Gosr1|53334|golgi SNAP receptor complex member 1	AK161386|Gosr1|53334|golgi SNAP receptor complex member 1	AF079901|Gosr1|53334|golgi SNAP receptor complex member 1	BC051661|Gosr1|53334|golgi SNAP receptor complex member 1
mm9_v1_chrX_+_57252655_57252676	1.2089	CRX.p2	M23109|F9|14071|coagulation factor IX
mm9_v1_chrX_+_97170927_97171053	1.20722	CRX.p2	AK028502|Eda|13607|ectodysplasin-A	AF016627|Eda|13607|ectodysplasin-A	AF016628|Eda|13607|ectodysplasin-A	AF016629|Eda|13607|ectodysplasin-A	AF016630|Eda|13607|ectodysplasin-A	DQ168876|Eda|13607|ectodysplasin-A	DQ168877|Eda|13607|ectodysplasin-A	DQ168878|Eda|13607|ectodysplasin-A	DQ168879|Eda|13607|ectodysplasin-A	DQ168880|Eda|13607|ectodysplasin-A	DQ168881|Eda|13607|ectodysplasin-A	NM_001177937|Eda|13607|ectodysplasin-A	NM_001177938|Eda|13607|ectodysplasin-A	NM_001177939|Eda|13607|ectodysplasin-A	NM_001177940|Eda|13607|ectodysplasin-A	NM_001177941|Eda|13607|ectodysplasin-A	NM_001177942|Eda|13607|ectodysplasin-A	NM_001177943|Eda|13607|ectodysplasin-A	NM_001177944|Eda|13607|ectodysplasin-A	NM_010099|Eda|13607|ectodysplasin-A	AF016631|Eda|13607|ectodysplasin-A	AJ243657|Eda|13607|ectodysplasin-A	AK040754|Eda|13607|ectodysplasin-A	AF004435|Eda|13607|ectodysplasin-A	AJ243658|Eda|13607|ectodysplasin-A	AK137551|Eda|13607|ectodysplasin-A	BC125387|Eda|13607|ectodysplasin-A	BC144790|Eda|13607|ectodysplasin-A	BC144791|Eda|13607|ectodysplasin-A
mm9_v1_chr9_+_110921791_110921833	1.20682	CRX.p2	AK036491|Ltf|17002|lactotransferrin	AK144556|Ltf|17002|lactotransferrin	AK150799|Ltf|17002|lactotransferrin	AK151822|Ltf|17002|lactotransferrin	AK164781|Ltf|17002|lactotransferrin	D88510|Ltf|17002|lactotransferrin	NM_008522|Ltf|17002|lactotransferrin	BC008530|Ltf|17002|lactotransferrin	AY792500|Ltf|17002|lactotransferrin	CT010339|Ltf|17002|lactotransferrin	FJ538998|Ltf|17002|lactotransferrin	J03298|Ltf|17002|lactotransferrin
mm9_v1_chr6_-_41586378_41586413	1.20124	CRX.p2	AK085123|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	AK168760|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6	NM_022413|Trpv6|64177|transient receptor potential cation channel, subfamily V, member 6
mm9_v1_chr17_+_47767638_47767638	1.1953	CRX.p2	BC060712|Usp49|224836|ubiquitin specific peptidase 49	NM_198421|Usp49|224836|ubiquitin specific peptidase 49
mm9_v1_chr7_-_107663293_107663468	1.19511	CRX.p2	AK139680|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	BC048501|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	NM_153527|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13	AF419292|Dnajb13|69387|DnaJ (Hsp40) related, subfamily B, member 13
mm9_v1_chr1_+_136007818_136007852	1.19232	CRX.p2	AK009012|Chit1|71884|chitinase 1 (chitotriosidase)	AY458654|Chit1|71884|chitinase 1 (chitotriosidase)	NM_027979|Chit1|71884|chitinase 1 (chitotriosidase)	BC138765|Chit1|71884|chitinase 1 (chitotriosidase)
mm9_v1_chr15_-_94408654_94408675	1.19089	CRX.p2	
mm9_v1_chr11_-_5607667_5607715	1.189	CRX.p2	BC029262|Mrps24|64660|mitochondrial ribosomal protein S24	AK010590|Mrps24|64660|mitochondrial ribosomal protein S24	AK003117|Mrps24|64660|mitochondrial ribosomal protein S24	AK007338|Mrps24|64660|mitochondrial ribosomal protein S24	AK014099|Mrps24|64660|mitochondrial ribosomal protein S24	AK012461|Mrps24|64660|mitochondrial ribosomal protein S24	NM_026080|Mrps24|64660|mitochondrial ribosomal protein S24
mm9_v1_chr7_+_107327192_107327214	1.18269	CRX.p2	NM_001190870|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	NM_001190871|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	NM_001190950|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	NM_020574|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	AK008744|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	DQ832280|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	BC004629|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3
mm9_v1_chr19_+_10280522_10280595	1.18076	CRX.p2	NM_001163431|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	BC058335|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene
mm9_v1_chr8_-_95603838_95603915	1.18009	CRX.p2	NM_001081372|Ces1b|382044|carboxylesterase 1B
mm9_v1_chr14_+_119379780_119379927	1.17252	CRX.p2	
mm9_v1_chr2_-_103143352_103143356	1.16943	CRX.p2	NM_007914|Ehf|13661|ets homologous factor
mm9_v1_chr5_+_65361309_65361366	1.16885	CRX.p2	AM162548|Fam114a1|68303|family with sequence similarity 114, member A1	BC110359|Fam114a1|68303|family with sequence similarity 114, member A1	AK030360|Fam114a1|68303|family with sequence similarity 114, member A1	NM_026667|Fam114a1|68303|family with sequence similarity 114, member A1	AK014725|Fam114a1|68303|family with sequence similarity 114, member A1	BC027235|Fam114a1|68303|family with sequence similarity 114, member A1	AK020262|Fam114a1|68303|family with sequence similarity 114, member A1	AK007950|Fam114a1|68303|family with sequence similarity 114, member A1	AK017336|Fam114a1|68303|family with sequence similarity 114, member A1	BC089499|Fam114a1|68303|family with sequence similarity 114, member A1
mm9_v1_chr10_+_66648458_66648510	1.16728	CRX.p2	AK087621|Jmjd1c|108829|jumonji domain containing 1C	AK170460|Jmjd1c|108829|jumonji domain containing 1C	AK135461|Jmjd1c|108829|jumonji domain containing 1C	AK085500|Jmjd1c|108829|jumonji domain containing 1C	AK133016|Jmjd1c|108829|jumonji domain containing 1C
mm9_v1_chr7_-_116760660_116760660	1.16531	CRX.p2	NM_001001326|St5|76954|suppression of tumorigenicity 5	NM_029811|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr9_-_44550590_44550598	1.16029	CRX.p2	
mm9_v1_chr13_+_41111618_41111728	1.15645	CRX.p2	NM_025387|Tmem14c|66154|transmembrane protein 14C	AK010609|Tmem14c|66154|transmembrane protein 14C	AK003891|Tmem14c|66154|transmembrane protein 14C	AK008495|Tmem14c|66154|transmembrane protein 14C	AK019395|Tmem14c|66154|transmembrane protein 14C	AK089021|Tmem14c|66154|transmembrane protein 14C	AK012101|Tmem14c|66154|transmembrane protein 14C	AK050688|Tmem14c|66154|transmembrane protein 14C	BC055862|Tmem14c|66154|transmembrane protein 14C	BC069899|Tmem14c|66154|transmembrane protein 14C	AK008878|Tmem14c|66154|transmembrane protein 14C	BC025854|Tmem14c|66154|transmembrane protein 14C
mm9_v1_chr9_-_78290953_78291043	1.15608	CRX.p2	BC052196|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	NM_173386|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK078662|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK054330|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK145268|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK154165|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145651|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	BC145653|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene	AK030292|E330016A19Rik|214763|RIKEN cDNA E330016A19 gene
mm9_v1_chr9_-_122203483_122203525	1.15197	CRX.p2	AK046091|Ano10|102566|anoctamin 10	AK079622|Ano10|102566|anoctamin 10	AK080947|Ano10|102566|anoctamin 10	NM_133979|Ano10|102566|anoctamin 10	AK043011|Ano10|102566|anoctamin 10	AK138414|Ano10|102566|anoctamin 10
mm9_v1_chr3_-_144637974_144638008	1.14854	CRX.p2	AY560902|Clca6|99663|chloride channel calcium activated 6	AY560903|Clca6|99663|chloride channel calcium activated 6	AK033591|Clca6|99663|chloride channel calcium activated 6	NM_207208|Clca6|99663|chloride channel calcium activated 6
mm9_v1_chr2_+_24240916_24240916	1.14568	CRX.p2	BC068231|Psd4|215632|pleckstrin and Sec7 domain containing 4	NM_177611|Psd4|215632|pleckstrin and Sec7 domain containing 4
mm9_v1_chr15_-_66644199_66644302	1.14381	CRX.p2	AJ131777|Sla|20491|src-like adaptor	AK037901|Sla|20491|src-like adaptor	AK137954|Sla|20491|src-like adaptor
mm9_v1_chr4_+_125773958_125773995	1.14217	CRX.p2	AK143443|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC026476|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC024543|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr16_+_33794122_33794122	1.14004	CRX.p2	J04634|Muc13|17063|mucin 13, epithelial transmembrane	NM_010739|Muc13|17063|mucin 13, epithelial transmembrane
mm9_v1_chr11_+_20991321_20991416	1.13905	CRX.p2	AK151660|Peli1|67245|pellino 1	AK152900|Peli1|67245|pellino 1	AK152997|Peli1|67245|pellino 1	AK153372|Peli1|67245|pellino 1	NM_023324|Peli1|67245|pellino 1	AK167525|Peli1|67245|pellino 1	BC026695|Peli1|67245|pellino 1
mm9_v1_chr7_-_16807341_16807387	1.13867	CRX.p2	BC080856|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK129062|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK004733|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	NM_027883|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm9_v1_chr10_+_127764070_127764180	1.13752	CRX.p2	
mm9_v1_chrX_-_75491259_75491259	1.12837	CRX.p2	NM_001126321|Gm14743|236874|predicted gene 14743
mm9_v1_chr14_+_63760617_63760645	1.12734	CRX.p2	AK190827|Ctsb|13030|cathepsin B
mm9_v1_chr4_+_99768413_99768450	1.12453	CRX.p2	BC095933|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	AK080896|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr2_+_31007833_31007940	1.12417	CRX.p2	NM_178760|Gpr107|277463|G protein-coupled receptor 107	AK082237|Gpr107|277463|G protein-coupled receptor 107	AK030433|Gpr107|277463|G protein-coupled receptor 107	AK154530|Gpr107|277463|G protein-coupled receptor 107	AK083025|Gpr107|277463|G protein-coupled receptor 107	AK088544|Gpr107|277463|G protein-coupled receptor 107	AK034815|Gpr107|277463|G protein-coupled receptor 107	BC117900|Gpr107|277463|G protein-coupled receptor 107	BC117901|Gpr107|277463|G protein-coupled receptor 107	BC092231|Gpr107|277463|G protein-coupled receptor 107	AK036987|Gpr107|277463|G protein-coupled receptor 107	AK142454|Gpr107|277463|G protein-coupled receptor 107	AK129407|Gpr107|277463|G protein-coupled receptor 107
mm9_v1_chr1_-_158649020_158649095	1.12155	CRX.p2	AK132149|Fam20b|215015|family with sequence similarity 20, member B	NM_145413|Fam20b|215015|family with sequence similarity 20, member B	AK034081|Fam20b|215015|family with sequence similarity 20, member B	BC019381|Fam20b|215015|family with sequence similarity 20, member B
mm9_v1_chr16_-_19883999_19884017	1.11426	CRX.p2	AK020919|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene
mm9_v1_chr5_-_72692122_72692149	1.11383	CRX.p2	AK005572|Corin|53419|corin
mm9_v1_chr7_+_134439804_134439861	1.11357	CRX.p2	AK156251|Itgal|16408|integrin alpha L	AK172394|Itgal|16408|integrin alpha L	AK154115|Itgal|16408|integrin alpha L	AK169628|Itgal|16408|integrin alpha L	NM_008400|Itgal|16408|integrin alpha L
mm9_v1_chr18_-_9995729_9995838	1.11324	CRX.p2	AK206781|Usp14|59025|ubiquitin specific peptidase 14	AK209109|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr11_-_106860750_106860783	1.11123	CRX.p2	BC094011|Kpna2|16647|karyopherin (importin) alpha 2	BC106110|Kpna2|16647|karyopherin (importin) alpha 2	BC082280|Kpna2|16647|karyopherin (importin) alpha 2	BC086789|Kpna2|16647|karyopherin (importin) alpha 2	BC006720|Kpna2|16647|karyopherin (importin) alpha 2	BC003274|Kpna2|16647|karyopherin (importin) alpha 2	U12270|Kpna2|16647|karyopherin (importin) alpha 2	AK139850|Kpna2|16647|karyopherin (importin) alpha 2	AK166982|Kpna2|16647|karyopherin (importin) alpha 2	AK075952|Kpna2|16647|karyopherin (importin) alpha 2	AK088496|Kpna2|16647|karyopherin (importin) alpha 2	AK147135|Kpna2|16647|karyopherin (importin) alpha 2	AK165577|Kpna2|16647|karyopherin (importin) alpha 2	AK166790|Kpna2|16647|karyopherin (importin) alpha 2	AK167551|Kpna2|16647|karyopherin (importin) alpha 2	AK169283|Kpna2|16647|karyopherin (importin) alpha 2	AK166577|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr11_+_69867893_69867970	1.10771	CRX.p2	BC022106|Asgr1|11889|asialoglycoprotein receptor 1	U09362|Asgr1|11889|asialoglycoprotein receptor 1	BC014779|Asgr1|11889|asialoglycoprotein receptor 1
mm9_v1_chr8_+_74662546_74662561	1.10134	CRX.p2	AK215613|Tpm4|326618|tropomyosin 4
mm9_v1_chr10_-_127999933_127999966	1.10098	CRX.p2	AK205907|Pa2g4|18813|proliferation-associated 2G4	AK207779|Pa2g4|18813|proliferation-associated 2G4
mm9_v1_chr16_+_27388907_27389196	1.10095	CRX.p2	BC144895|Ccdc50|67501|coiled-coil domain containing 50	BC144898|Ccdc50|67501|coiled-coil domain containing 50	BC145933|Ccdc50|67501|coiled-coil domain containing 50	BC145935|Ccdc50|67501|coiled-coil domain containing 50	NM_001025615|Ccdc50|67501|coiled-coil domain containing 50	NM_026202|Ccdc50|67501|coiled-coil domain containing 50	AK162434|Ccdc50|67501|coiled-coil domain containing 50	AK016827|Ccdc50|67501|coiled-coil domain containing 50	AK151672|Ccdc50|67501|coiled-coil domain containing 50	AK147820|Ccdc50|67501|coiled-coil domain containing 50	AK077557|Ccdc50|67501|coiled-coil domain containing 50	AK165214|Ccdc50|67501|coiled-coil domain containing 50	AK012190|Ccdc50|67501|coiled-coil domain containing 50	AJ534985|Ccdc50|67501|coiled-coil domain containing 50
mm9_v1_chr4_-_118162385_118162453	1.09853	CRX.p2	AK052413|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK051512|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_011587|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr12_-_105282485_105282654	1.09825	CRX.p2	AY326419|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014346|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	BC062143|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014589|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_026535|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
mm9_v1_chr6_+_134364445_134364503	1.0957	CRX.p2	AK018579|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	AK035707|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	AK008682|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	BC025541|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)
mm9_v1_chr15_-_74813781_74813859	1.0955	CRX.p2	AF232024|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC125350|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC132052|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC145087|Ly6i|57248|lymphocyte antigen 6 complex, locus I	NM_020498|Ly6i|57248|lymphocyte antigen 6 complex, locus I
mm9_v1_chr5_-_136450345_136450345	1.09178	CRX.p2	NM_001160366|Srcrb4d|109267|scavenger receptor cysteine rich domain containing, group B (4 domains)
mm9_v1_chr17_+_26698421_26698560	1.09047	CRX.p2	BC005516|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	NM_026170|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK173123|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK003239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK088157|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK004629|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK151239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK084385|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	BC083144|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AB093571|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	CT010230|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr1_-_164914621_164914660	1.09032	CRX.p2	NM_008030|Fmo3|14262|flavin containing monooxygenase 3	U87147|Fmo3|14262|flavin containing monooxygenase 3	AK149440|Fmo3|14262|flavin containing monooxygenase 3	AK050123|Fmo3|14262|flavin containing monooxygenase 3
mm9_v1_chr19_-_46747355_46747384	1.08568	CRX.p2	M64863|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1	AK132830|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1	AK134376|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1
mm9_v1_chr6_+_87323350_87323369	1.08427	CRX.p2	AY943909|Gkn2|66284|gastrokine 2	AK007451|Gkn2|66284|gastrokine 2	AK007705|Gkn2|66284|gastrokine 2	AK008692|Gkn2|66284|gastrokine 2	AK008986|Gkn2|66284|gastrokine 2	NM_025467|Gkn2|66284|gastrokine 2	BC099445|Gkn2|66284|gastrokine 2
mm9_v1_chr4_+_140924106_140924134	1.08411	CRX.p2	BC147048|Fam131c|277743|family with sequence similarity 131, member C	BC147049|Fam131c|277743|family with sequence similarity 131, member C	NM_001085513|Fam131c|277743|family with sequence similarity 131, member C
mm9_v1_chr9_+_21125147_21125248	1.07917	CRX.p2	AK153992|Slc44a2|68682|solute carrier family 44, member 2	BC023763|Slc44a2|68682|solute carrier family 44, member 2	AK043924|Slc44a2|68682|solute carrier family 44, member 2	AK029457|Slc44a2|68682|solute carrier family 44, member 2	AK041533|Slc44a2|68682|solute carrier family 44, member 2	AK088553|Slc44a2|68682|solute carrier family 44, member 2
mm9_v1_chr10_+_23571267_23571295	1.07656	CRX.p2	NM_011979|Vnn3|26464|vanin 3	AJ132103|Vnn3|26464|vanin 3	BC111521|Vnn3|26464|vanin 3
mm9_v1_chr5_-_77836974_77837014	1.07521	CRX.p2	BC047202|Igfbp7|29817|insulin-like growth factor binding protein 7
mm9_v1_chr7_-_133726668_133726903	1.07461	CRX.p2	U92811|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U47106|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC060306|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U68064|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	AK078976|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	NM_009907|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC080759|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC058753|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr16_-_88826362_88826389	1.07406	CRX.p2	BC104263|Krtap14|23927|keratin associated protein 14	BC104262|Krtap14|23927|keratin associated protein 14	AF003691|Krtap14|23927|keratin associated protein 14	D85925|Krtap14|23927|keratin associated protein 14	NM_013707|Krtap14|23927|keratin associated protein 14
mm9_v1_chr4_+_99768392_99768410	1.07257	CRX.p2	AK049369|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	NM_013845|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	BC138794|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1	BC138810|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chrX_+_71696434_71696477	1.06986	CRX.p2	AK042138|Ikbkg|16151|inhibitor of kappaB kinase gamma	BC026905|Ikbkg|16151|inhibitor of kappaB kinase gamma
mm9_v1_chr3_+_90318260_90318356	1.06866	CRX.p2	BC005687|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr2_-_121890678_121890752	1.06835	CRX.p2	BC019404|Spg11|214585|spastic paraplegia 11
mm9_v1_chr14_+_26942094_26942094	1.06569	CRX.p2	NM_001177538|Gm10394|100039227|predicted gene 10394	NM_001177539|Gm10391|100039293|predicted gene 10391
mm9_v1_chr11_+_9091944_9091944	1.06502	CRX.p2	AK036546|Abca13|268379|ATP-binding cassette, sub-family A (ABC1), member 13	NM_178259|Abca13|268379|ATP-binding cassette, sub-family A (ABC1), member 13
mm9_v1_chrX_+_104344265_104344265	1.06329	CRX.p2	NM_001122596|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr16_-_19983049_19983121	1.05551	CRX.p2	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr7_+_135390456_135390509	1.05448	CRX.p2	AK158409|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK085042|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK003170|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK087114|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK156423|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC002049|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK041233|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143892|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143893|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143894|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr17_+_34784077_34784176	1.05139	CRX.p2	BC013534|Atf6b|12915|activating transcription factor 6 beta	AK146671|Atf6b|12915|activating transcription factor 6 beta	NM_017406|Atf6b|12915|activating transcription factor 6 beta	AK090378|Atf6b|12915|activating transcription factor 6 beta	BC052635|Atf6b|12915|activating transcription factor 6 beta	AK159169|Atf6b|12915|activating transcription factor 6 beta	AK170027|Atf6b|12915|activating transcription factor 6 beta	AK143765|Atf6b|12915|activating transcription factor 6 beta
mm9_v1_chr19_+_43856793_43856893	1.04586	CRX.p2	NM_013806|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF227274|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282772|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282773|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm9_v1_chr6_+_128612402_128612426	1.04375	CRX.p2	AK136426|Clec2h|94071|C-type lectin domain family 2, member h	AK090364|Clec2h|94071|C-type lectin domain family 2, member h	NM_053165|Clec2h|94071|C-type lectin domain family 2, member h	AK017207|Clec2h|94071|C-type lectin domain family 2, member h	AF350410|Clec2h|94071|C-type lectin domain family 2, member h	BC021766|Clec2h|94071|C-type lectin domain family 2, member h
mm9_v1_chr17_-_34251399_34251468	1.03658	CRX.p2	AK188169|Brd2|14312|bromodomain containing 2
mm9_v1_chr14_-_122364309_122364416	1.03654	CRX.p2	BC052868|Gpr183|321019|G protein-coupled receptor 183	AK141593|Gpr183|321019|G protein-coupled receptor 183	AK153216|Gpr183|321019|G protein-coupled receptor 183	AK087951|Gpr183|321019|G protein-coupled receptor 183	AK156005|Gpr183|321019|G protein-coupled receptor 183	AK156289|Gpr183|321019|G protein-coupled receptor 183	NM_183031|Gpr183|321019|G protein-coupled receptor 183	AK138693|Gpr183|321019|G protein-coupled receptor 183
mm9_v1_chr10_-_79783221_79783306	1.03604	CRX.p2	AK046452|2310011J03Rik|66374|RIKEN cDNA 2310011J03 gene	AK140230|2310011J03Rik|66374|RIKEN cDNA 2310011J03 gene	BC023429|2310011J03Rik|66374|RIKEN cDNA 2310011J03 gene	AK009305|2310011J03Rik|66374|RIKEN cDNA 2310011J03 gene	AK020401|2310011J03Rik|66374|RIKEN cDNA 2310011J03 gene	NM_025521|2310011J03Rik|66374|RIKEN cDNA 2310011J03 gene
mm9_v1_chr4_-_16090763_16090789	1.03521	CRX.p2	BC058088|Ripk2|192656|receptor (TNFRSF)-interacting serine-threonine kinase 2
mm9_v1_chr9_+_110322311_110322361	1.03483	CRX.p2	NM_008694|Ngp|18054|neutrophilic granule protein	BC119403|Ngp|18054|neutrophilic granule protein	BC119405|Ngp|18054|neutrophilic granule protein	U95002|Ngp|18054|neutrophilic granule protein	AK009649|Ngp|18054|neutrophilic granule protein	AK165210|Ngp|18054|neutrophilic granule protein
mm9_v1_chr6_-_124790292_124790292	1.03426	CRX.p2	BC018239|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3	NM_013530|Gnb3|14695|guanine nucleotide binding protein (G protein), beta 3
mm9_v1_chr17_-_24854956_24855001	1.03398	CRX.p2	AK005854|Rnf151|67504|ring finger protein 151	AK005850|Rnf151|67504|ring finger protein 151	BC049562|Rnf151|67504|ring finger protein 151	NM_026205|Rnf151|67504|ring finger protein 151
mm9_v1_chr18_+_32416881_32416904	1.03248	CRX.p2	BC024446|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm9_v1_chr7_+_148274044_148274095	1.02783	CRX.p2	AK154376|Pkp3|56460|plakophilin 3
mm9_v1_chrX_+_98469429_98469601	1.02739	CRX.p2	BC090654|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)	NM_021521|Med12|59024|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)
mm9_v1_chr15_-_56526052_56526100	1.0269	CRX.p2	U52524|Has2|15117|hyaluronan synthase 2	BC080281|Has2|15117|hyaluronan synthase 2	U69695|Has2|15117|hyaluronan synthase 2	AK045020|Has2|15117|hyaluronan synthase 2	AK079729|Has2|15117|hyaluronan synthase 2	NM_008216|Has2|15117|hyaluronan synthase 2
mm9_v1_chr17_+_46298019_46298034	1.02656	CRX.p2	BC049089|Gtpbp2|56055|GTP binding protein 2	BC051958|Gtpbp2|56055|GTP binding protein 2	AK146415|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chr14_+_73637697_73637874	1.02599	CRX.p2	NM_175116|Lpar6|67168|lysophosphatidic acid receptor 6	AK032901|Lpar6|67168|lysophosphatidic acid receptor 6	AK011967|Lpar6|67168|lysophosphatidic acid receptor 6	AK169602|Lpar6|67168|lysophosphatidic acid receptor 6	BC047931|Lpar6|67168|lysophosphatidic acid receptor 6	AK008952|Lpar6|67168|lysophosphatidic acid receptor 6	BC057175|Lpar6|67168|lysophosphatidic acid receptor 6	BC069991|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr2_+_13501725_13501846	1.02582	CRX.p2	AK205443|Vim|22352|vimentin
mm9_v1_chr8_+_77591429_77591438	1.02384	CRX.p2	AK210394|Tom1|21968|target of myb1 homolog (chicken)
mm9_v1_chr4_-_12015073_12015153	1.0232	CRX.p2	AK017238|Tmem67|329795|transmembrane protein 67	AK039177|Tmem67|329795|transmembrane protein 67	AK042835|Tmem67|329795|transmembrane protein 67	AK133059|Tmem67|329795|transmembrane protein 67	AK045429|Tmem67|329795|transmembrane protein 67	NM_177861|Tmem67|329795|transmembrane protein 67	AK077246|Tmem67|329795|transmembrane protein 67
mm9_v1_chr2_+_157105002_157105058	1.0174	CRX.p2	AK161624|Rpn2|20014|ribophorin II	AK166778|Rpn2|20014|ribophorin II	AK167864|Rpn2|20014|ribophorin II	AK167866|Rpn2|20014|ribophorin II	AK168221|Rpn2|20014|ribophorin II
mm9_v1_chr7_+_29581002_29581006	1.01679	CRX.p2	AK082828|Rinl|320435|Ras and Rab interactor-like
mm9_v1_chr7_-_16844888_16844888	1.01543	CRX.p2	NM_007577|C5ar1|12273|complement component 5a receptor 1
mm9_v1_chr16_+_4741612_4741615	1.0135	CRX.p2	AF054669|Hmox2|15369|heme oxygenase (decycling) 2	NM_010443|Hmox2|15369|heme oxygenase (decycling) 2	AF029874|Hmox2|15369|heme oxygenase (decycling) 2
mm9_v1_chr1_-_127289729_127289773	1.00726	CRX.p2	
mm9_v1_chr1_-_179573073_179573142	1.00354	CRX.p2	AK009784|2310043L19Rik|75589|RIKEN cDNA 2310043L19 gene
mm9_v1_chr16_-_19883985_19883989	1.0015	CRX.p2	AK020802|A930003A15Rik|68162|RIKEN cDNA A930003A15 gene
mm9_v1_chr2_-_125971986_125971986	1.00016	CRX.p2	NM_029455|4930525F21Rik|75823|RIKEN cDNA 4930525F21 gene
mm9_v1_chr3_-_157686385_157686385	0.999185	CRX.p2	NM_026989|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr4_-_43058685_43058696	0.999067	CRX.p2	BC044832|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene
mm9_v1_chr4_+_155186568_155186886	0.998605	CRX.p2	NM_207678|Ccnl2|56036|cyclin L2	AK007552|Ccnl2|56036|cyclin L2	BC132295|Ccnl2|56036|cyclin L2	AK048244|Ccnl2|56036|cyclin L2	AK156037|Ccnl2|56036|cyclin L2	AB041605|Ccnl2|56036|cyclin L2	AY337018|Ccnl2|56036|cyclin L2	AK169857|Ccnl2|56036|cyclin L2	BC023747|Ccnl2|56036|cyclin L2	AF211859|Ccnl2|56036|cyclin L2	AK044204|Ccnl2|56036|cyclin L2	AK008585|Ccnl2|56036|cyclin L2	AK138938|Ccnl2|56036|cyclin L2
mm9_v1_chr4_-_133527108_133527157	0.99392	CRX.p2	AK205621|Dhdds|67422|dehydrodolichyl diphosphate synthase
mm9_v1_chr1_+_179375951_179375951	0.986601	CRX.p2	AF140224|Zfp238|30928|zinc finger protein 238	NM_013915|Zfp238|30928|zinc finger protein 238
mm9_v1_chr17_+_6429259_6429295	0.985451	CRX.p2	BC043018|Dynlt1b|21648|dynein light chain Tctex-type 1D	NM_009342|Dynlt1b|21648|dynein light chain Tctex-type 1D
mm9_v1_chr1_-_69154627_69154642	0.982026	CRX.p2	AK144050|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_010154|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
mm9_v1_chr19_-_47212695_47212783	0.981802	CRX.p2	BC019197|Calhm2|72691|calcium homeostasis modulator 2	AK012923|Calhm2|72691|calcium homeostasis modulator 2	AK170068|Calhm2|72691|calcium homeostasis modulator 2	AK036961|Calhm2|72691|calcium homeostasis modulator 2	BC096564|Calhm2|72691|calcium homeostasis modulator 2	AK040739|Calhm2|72691|calcium homeostasis modulator 2	AK089278|Calhm2|72691|calcium homeostasis modulator 2	NM_133746|Calhm2|72691|calcium homeostasis modulator 2
mm9_v1_chr19_-_14671832_14671910	0.97954	CRX.p2	AF229633|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr14_-_56377206_56377214	0.977883	CRX.p2	BC012664|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr9_-_42072256_42072341	0.976481	CRX.p2	AB016248|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	BC024132|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	AK154309|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	AK043825|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	AK077670|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chr11_+_67466072_67466088	0.975663	CRX.p2	AF133184|Gas7|14457|growth arrest specific 7
mm9_v1_chr7_+_114738564_114738564	0.970317	CRX.p2	NM_008905|Ppfibp2|19024|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm9_v1_chr6_+_71443871_71443920	0.968024	CRX.p2	D76445|Rnf103|22644|ring finger protein 103	NM_009543|Rnf103|22644|ring finger protein 103	AK168644|Rnf103|22644|ring finger protein 103	AK146898|Rnf103|22644|ring finger protein 103
mm9_v1_chrX_+_57252630_57252647	0.967462	CRX.p2	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr10_+_96945057_96945132	0.965517	CRX.p2	BC132521|Dcn|13179|decorin	BC138564|Dcn|13179|decorin
mm9_v1_chr16_-_35871459_35871582	0.964881	CRX.p2	AK005563|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK089685|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156483|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156593|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	NM_001039530|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC138874|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC145452|Parp14|547253|poly (ADP-ribose) polymerase family, member 14
mm9_v1_chrX_-_7753020_7753088	0.96366	CRX.p2	AK166256|Tbc1d25|209815|TBC1 domain family, member 25	AK040932|Tbc1d25|209815|TBC1 domain family, member 25	BC060178|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr4_-_150422072_150422126	0.962909	CRX.p2	
mm9_v1_chr7_+_29581063_29581076	0.961973	CRX.p2	AK168472|Rinl|320435|Ras and Rab interactor-like
mm9_v1_chr2_-_155649645_155649731	0.96036	CRX.p2	AK212176|Eif6|16418|eukaryotic translation initiation factor 6	AK181580|Eif6|16418|eukaryotic translation initiation factor 6	AK177151|Eif6|16418|eukaryotic translation initiation factor 6	Y11460|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr10_+_99478457_99478639	0.957746	CRX.p2	AK018777|Kitl|17311|kit ligand	NM_013598|Kitl|17311|kit ligand	U44725|Kitl|17311|kit ligand	AK134301|Kitl|17311|kit ligand	AK041961|Kitl|17311|kit ligand	AK165233|Kitl|17311|kit ligand	BC011322|Kitl|17311|kit ligand	M57647|Kitl|17311|kit ligand	S40364|Kitl|17311|kit ligand	S40534|Kitl|17311|kit ligand	S40536|Kitl|17311|kit ligand	M64262|Kitl|17311|kit ligand	X95379|Kitl|17311|kit ligand	X95380|Kitl|17311|kit ligand	X95381|Kitl|17311|kit ligand	X99322|Kitl|17311|kit ligand	Y10287|Kitl|17311|kit ligand	M59915|Kitl|17311|kit ligand
mm9_v1_chr4_-_74924159_74924210	0.957145	CRX.p2	AK003640|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene	BC022621|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene	NM_025849|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene	AK013937|3110001D03Rik|66928|RIKEN cDNA 3110001D03 gene
mm9_v1_chr7_-_87857062_87857123	0.950123	CRX.p2	
mm9_v1_chr3_-_129035406_129035666	0.949293	CRX.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr3_+_28596824_28596914	0.941886	CRX.p2	AK005068|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	NM_031197|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	AK165430|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	X15684|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	BC034675|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2
mm9_v1_chr1_+_182981367_182981391	0.940497	CRX.p2	AK162201|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	NM_001033819|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	AK136575|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	BC147378|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene	BC147379|9130409I23Rik|619326|RIKEN cDNA 9130409I23 gene
mm9_v1_chr6_-_30193802_30193802	0.939537	CRX.p2	NM_001169577|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr6_-_69193672_69193737	0.938272	CRX.p2	
mm9_v1_chr17_+_37035062_37035074	0.937897	CRX.p2	AK033650|Trim31|224762|tripartite motif-containing 31	BC026666|Trim31|224762|tripartite motif-containing 31	NM_146077|Trim31|224762|tripartite motif-containing 31
mm9_v1_chr8_-_46347384_46347394	0.934659	CRX.p2	AK005546|F11|109821|coagulation factor XI	NM_028066|F11|109821|coagulation factor XI
mm9_v1_chrM_-_13886_13905	0.934177	CRX.p2	
mm9_v1_chr3_+_19857375_19857397	0.934031	CRX.p2	AK033842|Cp|12870|ceruloplasmin
mm9_v1_chr6_+_78320878_78320878	0.932546	CRX.p2	D63359|Reg3b|18489|regenerating islet-derived 3 beta	NM_011036|Reg3b|18489|regenerating islet-derived 3 beta
mm9_v1_chr10_+_57370786_57370799	0.930904	CRX.p2	BC052351|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001039050|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001190402|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	BC087894|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific
mm9_v1_chr1_+_45401659_45401671	0.929777	CRX.p2	AK079113|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr14_-_9091345_9091363	0.929418	CRX.p2	BC021339|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain	NM_001161667|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr18_-_78793589_78793688	0.929257	CRX.p2	AF258602|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	BC150680|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	AF366052|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	NM_030683|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	NM_207651|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2
mm9_v1_chr8_+_26830853_26830927	0.926054	CRX.p2	AK007542|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC039626|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr10_-_25255955_25256077	0.923837	CRX.p2	AK008073|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene	NM_001195596|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene
mm9_v1_chr1_-_166865638_166865652	0.920092	CRX.p2	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr17_+_34729396_34729495	0.917534	CRX.p2	AF020198|Pbx2|18515|pre B-cell leukemia transcription factor 2	NM_017463|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC087615|Pbx2|18515|pre B-cell leukemia transcription factor 2	AK134357|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr16_+_36081360_36081360	0.916344	CRX.p2	NM_001159422|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr10_+_126602394_126602451	0.915629	CRX.p2	BC022180|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr9_-_26807082_26807092	0.911905	CRX.p2	AK051091|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8	AK161255|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8
mm9_v1_chr4_+_80556574_80556717	0.910534	CRX.p2	NM_026821|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC030404|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC021501|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed
mm9_v1_chr8_+_72655224_72655304	0.909771	CRX.p2	AK010864|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	NM_001025586|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	NM_001025587|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	AK160346|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	AK168268|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	AK010140|Nr2c2ap|75692|nuclear receptor 2C2-associated protein	BC092288|Nr2c2ap|75692|nuclear receptor 2C2-associated protein
mm9_v1_chr15_-_3421486_3421486	0.90838	CRX.p2	M31680|Ghr|14600|growth hormone receptor	M33324|Ghr|14600|growth hormone receptor	NM_001048147|Ghr|14600|growth hormone receptor
mm9_v1_chr10_+_96944961_96945010	0.90744	CRX.p2	NM_007833|Dcn|13179|decorin	AK147020|Dcn|13179|decorin
mm9_v1_chr2_+_131776596_131776620	0.903738	CRX.p2	AK043023|Prnd|26434|prion protein dublet	AK161043|Prnd|26434|prion protein dublet	DQ832281|Prnd|26434|prion protein dublet	NM_001126338|Prnd|26434|prion protein dublet	NM_023043|Prnd|26434|prion protein dublet	AF192384|Prnd|26434|prion protein dublet	AF192385|Prnd|26434|prion protein dublet	AF165166|Prnd|26434|prion protein dublet	BC025140|Prnd|26434|prion protein dublet
mm9_v1_chr6_-_21802087_21802170	0.898224	CRX.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr3_+_57229362_57229380	0.897531	CRX.p2	AK148484|Tm4sf4|229302|transmembrane 4 superfamily member 4	AK165731|Tm4sf4|229302|transmembrane 4 superfamily member 4	BC010814|Tm4sf4|229302|transmembrane 4 superfamily member 4
mm9_v1_chr11_-_76577079_76577091	0.897434	CRX.p2	AK147799|Gosr1|53334|golgi SNAP receptor complex member 1	AK154972|Gosr1|53334|golgi SNAP receptor complex member 1
mm9_v1_chr10_+_92951804_92951841	0.896657	CRX.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr3_+_41419561_41419606	0.894283	CRX.p2	AK040146|Phf17|269424|PHD finger protein 17
mm9_v1_chr5_+_38651466_38651637	0.890757	CRX.p2	BC025197|Tmem128|66309|transmembrane protein 128	AK012789|Tmem128|66309|transmembrane protein 128	AK013227|Tmem128|66309|transmembrane protein 128	AK080853|Tmem128|66309|transmembrane protein 128	NM_025480|Tmem128|66309|transmembrane protein 128	AK162257|Tmem128|66309|transmembrane protein 128	AK076679|Tmem128|66309|transmembrane protein 128	BC060969|Tmem128|66309|transmembrane protein 128	BC110310|Tmem128|66309|transmembrane protein 128
mm9_v1_chr4_-_41261815_41261871	0.889427	CRX.p2	AK087517|Dcaf12|68970|DDB1 and CUL4 associated factor 12	BC023852|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK083369|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK031089|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr12_+_112783003_112783121	0.889423	CRX.p2	AK218038|Eif5|217869|eukaryotic translation initiation factor 5
mm9_v1_chr6_+_123728988_123728988	0.888157	CRX.p2	NM_001104639|Vmn2r24|243628|vomeronasal 2, receptor 24
mm9_v1_chr8_+_74066795_74066869	0.886891	CRX.p2	BC020119|Fam125a|73711|family with sequence similarity 125, member A	NM_028617|Fam125a|73711|family with sequence similarity 125, member A	BC087734|Fam125a|73711|family with sequence similarity 125, member A	AK003644|Fam125a|73711|family with sequence similarity 125, member A	BC027419|Fam125a|73711|family with sequence similarity 125, member A
mm9_v1_chr3_-_142456600_142456910	0.884698	CRX.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr7_-_29383178_29383179	0.883612	CRX.p2	AK088512|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr10_-_128181069_128181164	0.88341	CRX.p2	BC006713|Dgka|13139|diacylglycerol kinase, alpha	NM_016811|Dgka|13139|diacylglycerol kinase, alpha
mm9_v1_chr19_+_58803376_58803466	0.882935	CRX.p2	AF061274|Pnliprp1|18946|pancreatic lipase related protein 1	NM_018874|Pnliprp1|18946|pancreatic lipase related protein 1	AK028105|Pnliprp1|18946|pancreatic lipase related protein 1	BC090985|Pnliprp1|18946|pancreatic lipase related protein 1
mm9_v1_chr8_-_46347363_46347377	0.880531	CRX.p2	BC019485|F11|109821|coagulation factor XI	AF356627|F11|109821|coagulation factor XI
mm9_v1_chr10_-_80630518_80630667	0.879889	CRX.p2	AK145367|Pias4|59004|protein inhibitor of activated STAT 4	AF109174|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr1_-_71686889_71687012	0.875578	CRX.p2	AK147249|Fn1|14268|fibronectin 1
mm9_v1_chr14_-_32454060_32454136	0.874887	CRX.p2	BC021360|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK161488|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK005505|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr17_+_35068184_35068197	0.874435	CRX.p2	NM_010893|Neu1|18010|neuraminidase 1
mm9_v1_chr3_-_89018256_89018256	0.868219	CRX.p2	NM_001161824|Mtx1|17827|metaxin 1	NM_013604|Mtx1|17827|metaxin 1
mm9_v1_chr8_-_22235728_22235728	0.868002	CRX.p2	AY761183|Gm14851|634825|predicted gene 14851	NM_001177482|Gm14851|634825|predicted gene 14851
mm9_v1_chr5_+_104864146_104864160	0.867837	CRX.p2	BC020355|Spp1|20750|secreted phosphoprotein 1	BC029991|Spp1|20750|secreted phosphoprotein 1	BC057858|Spp1|20750|secreted phosphoprotein 1	BC002113|Spp1|20750|secreted phosphoprotein 1	BC080720|Spp1|20750|secreted phosphoprotein 1	J04806|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr7_-_31608793_31608793	0.865158	CRX.p2	AK078861|Ffar2|233079|free fatty acid receptor 2	NM_146187|Ffar2|233079|free fatty acid receptor 2
mm9_v1_chrX_+_160577312_160577325	0.8615	CRX.p2	EF408739|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	EF408740|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr4_+_44045506_44045645	0.860424	CRX.p2	
mm9_v1_chr1_+_172238933_172238992	0.851634	CRX.p2	AK005990|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC099563|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	NM_001039593|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC132313|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene	BC132315|1700015E13Rik|76925|RIKEN cDNA 1700015E13 gene
mm9_v1_chr6_-_88848650_88848773	0.850785	CRX.p2	AF004105|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK129039|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK077801|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088378|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	BC055318|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK145176|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088156|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146187|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	D86725|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146375|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK037751|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	NM_008564|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
mm9_v1_chr8_-_75005707_75005831	0.848433	CRX.p2	AK090231|Slc35e1|270066|solute carrier family 35, member E1	AK182855|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr16_-_44016471_44016548	0.845921	CRX.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr12_+_80309899_80309933	0.840219	CRX.p2	AK164157|Rdh12|77974|retinol dehydrogenase 12	AK039233|Rdh12|77974|retinol dehydrogenase 12	NM_030017|Rdh12|77974|retinol dehydrogenase 12	AK020927|Rdh12|77974|retinol dehydrogenase 12	BC016204|Rdh12|77974|retinol dehydrogenase 12	BC067213|Rdh12|77974|retinol dehydrogenase 12
mm9_v1_chr2_-_156960826_156961007	0.837489	CRX.p2	AK128954|Samhd1|56045|SAM domain and HD domain, 1	AK149865|Samhd1|56045|SAM domain and HD domain, 1	AK151335|Samhd1|56045|SAM domain and HD domain, 1	AK153390|Samhd1|56045|SAM domain and HD domain, 1	AK054490|Samhd1|56045|SAM domain and HD domain, 1	AK170688|Samhd1|56045|SAM domain and HD domain, 1	AK171565|Samhd1|56045|SAM domain and HD domain, 1	BC067198|Samhd1|56045|SAM domain and HD domain, 1	U15635|Samhd1|56045|SAM domain and HD domain, 1	BC012721|Samhd1|56045|SAM domain and HD domain, 1	AK078936|Samhd1|56045|SAM domain and HD domain, 1	NM_001139520|Samhd1|56045|SAM domain and HD domain, 1	NM_018851|Samhd1|56045|SAM domain and HD domain, 1
mm9_v1_chr10_-_26095736_26095813	0.831527	CRX.p2	BC082309|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK031398|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr17_-_36809141_36809141	0.830039	CRX.p2	AF539594|H2-M1|224756|histocompatibility 2, M region locus 1	NM_177636|H2-M1|224756|histocompatibility 2, M region locus 1
mm9_v1_chr9_-_58097569_58097598	0.829054	CRX.p2	AK052305|Pml|18854|promyelocytic leukemia	AK054135|Pml|18854|promyelocytic leukemia	AK028044|Pml|18854|promyelocytic leukemia	NM_008884|Pml|18854|promyelocytic leukemia	NM_178087|Pml|18854|promyelocytic leukemia
mm9_v1_chr17_-_40379205_40379215	0.826228	CRX.p2	BC132536|Crisp3|11572|cysteine-rich secretory protein 3	BC132538|Crisp3|11572|cysteine-rich secretory protein 3	L05560|Crisp3|11572|cysteine-rich secretory protein 3	NM_009639|Crisp3|11572|cysteine-rich secretory protein 3	BC114345|Crisp3|11572|cysteine-rich secretory protein 3	M92850|Crisp3|11572|cysteine-rich secretory protein 3	BC022573|Crisp3|11572|cysteine-rich secretory protein 3
mm9_v1_chr9_-_50910070_50910182	0.824523	CRX.p2	AK014780|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	AK132837|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	BC048587|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	NM_177702|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene
mm9_v1_chr10_-_18735154_18735215	0.823089	CRX.p2	AK153238|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK088297|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK151921|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC050259|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC054806|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC060221|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	NM_009397|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3
mm9_v1_chr2_+_85815369_85815369	0.823011	CRX.p2	BC150841|Olfr1029|258154|olfactory receptor 1029	NM_001011852|Olfr1029|258154|olfactory receptor 1029
mm9_v1_chr4_-_129235583_129235617	0.821371	CRX.p2	M12056|Lck|16818|lymphocyte protein tyrosine kinase	AK134013|Lck|16818|lymphocyte protein tyrosine kinase	AK088001|Lck|16818|lymphocyte protein tyrosine kinase	NM_001162432|Lck|16818|lymphocyte protein tyrosine kinase	NM_010693|Lck|16818|lymphocyte protein tyrosine kinase
mm9_v1_chr2_+_103810274_103810481	0.816911	CRX.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chr19_-_4139516_4139608	0.814761	CRX.p2	BC029002|Cabp4|73660|calcium binding protein 4	BC053330|Cabp4|73660|calcium binding protein 4	AY039218|Cabp4|73660|calcium binding protein 4	BC049263|Cabp4|73660|calcium binding protein 4	NM_144532|Cabp4|73660|calcium binding protein 4
mm9_v1_chr14_+_31948038_31948038	0.81232	CRX.p2	BC011230|Nt5dc2|70021|5'-nucleotidase domain containing 2	NM_027289|Nt5dc2|70021|5'-nucleotidase domain containing 2
mm9_v1_chr16_-_35769389_35769480	0.810419	CRX.p2	BC037460|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK034214|Dirc2|224132|disrupted in renal carcinoma 2 (human)	NM_153550|Dirc2|224132|disrupted in renal carcinoma 2 (human)	AK172331|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr17_+_26792031_26792503	0.807934	CRX.p2	AK010290|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr1_+_175350728_175350734	0.803618	CRX.p2	BC033443|Aim2|383619|absent in melanoma 2	AK050724|Aim2|383619|absent in melanoma 2	NM_001013779|Aim2|383619|absent in melanoma 2
mm9_v1_chr14_-_79790474_79790599	0.803551	CRX.p2	BC052445|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	NM_025832|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK005056|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK152498|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK007755|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit	AK028432|Naa16|66897|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
mm9_v1_chr3_+_95965892_95965939	0.80306	CRX.p2	NM_181409|Mtmr11|194126|myotubularin related protein 11	AK132375|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr3_-_10183884_10183884	0.801251	CRX.p2	BC099520|Pmp2|18857|peripheral myelin protein 2	NM_001030305|Pmp2|18857|peripheral myelin protein 2
mm9_v1_chr11_+_116396053_116396165	0.79642	CRX.p2	AF068749|Sphk1|20698|sphingosine kinase 1	NM_011451|Sphk1|20698|sphingosine kinase 1	AF415213|Sphk1|20698|sphingosine kinase 1
mm9_v1_chr5_-_38893331_38893390	0.795023	CRX.p2	BC138213|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	BC145198|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	BC006076|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	NM_145559|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9
mm9_v1_chr10_-_58904445_58904526	0.794104	CRX.p2	AY180915|Oit3|18302|oncoprotein induced transcript 3	AF356506|Oit3|18302|oncoprotein induced transcript 3	AK050081|Oit3|18302|oncoprotein induced transcript 3	AK040570|Oit3|18302|oncoprotein induced transcript 3	NM_010959|Oit3|18302|oncoprotein induced transcript 3
mm9_v1_chr9_-_110959315_110959476	0.792363	CRX.p2	AJ318863|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AF316576|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr4_+_115845976_115845999	0.790534	CRX.p2	AK006685|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	NM_001099295|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	AK018884|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene
mm9_v1_chr15_+_103103335_103103351	0.786887	CRX.p2	BC085314|Copz1|56447|coatomer protein complex, subunit zeta 1	AK003302|Copz1|56447|coatomer protein complex, subunit zeta 1	AK167636|Copz1|56447|coatomer protein complex, subunit zeta 1	BC002246|Copz1|56447|coatomer protein complex, subunit zeta 1	BC025041|Copz1|56447|coatomer protein complex, subunit zeta 1	BC039920|Copz1|56447|coatomer protein complex, subunit zeta 1	BC062203|Copz1|56447|coatomer protein complex, subunit zeta 1	AB037370|Copz1|56447|coatomer protein complex, subunit zeta 1	NM_019817|Copz1|56447|coatomer protein complex, subunit zeta 1	BC052891|Copz1|56447|coatomer protein complex, subunit zeta 1	BC058524|Copz1|56447|coatomer protein complex, subunit zeta 1
mm9_v1_chr14_+_8930682_8930828	0.784724	CRX.p2	AK150660|Pxk|218699|PX domain containing serine/threonine kinase	AK147037|Pxk|218699|PX domain containing serine/threonine kinase	AK172463|Pxk|218699|PX domain containing serine/threonine kinase	NM_145458|Pxk|218699|PX domain containing serine/threonine kinase	NM_178279|Pxk|218699|PX domain containing serine/threonine kinase	AK170361|Pxk|218699|PX domain containing serine/threonine kinase	AK157364|Pxk|218699|PX domain containing serine/threonine kinase	AK150337|Pxk|218699|PX domain containing serine/threonine kinase	AK150413|Pxk|218699|PX domain containing serine/threonine kinase	BC016131|Pxk|218699|PX domain containing serine/threonine kinase	AK156146|Pxk|218699|PX domain containing serine/threonine kinase	AK169565|Pxk|218699|PX domain containing serine/threonine kinase	AK048910|Pxk|218699|PX domain containing serine/threonine kinase	AK151098|Pxk|218699|PX domain containing serine/threonine kinase	AK152058|Pxk|218699|PX domain containing serine/threonine kinase	AK152789|Pxk|218699|PX domain containing serine/threonine kinase	AK153067|Pxk|218699|PX domain containing serine/threonine kinase	AK169112|Pxk|218699|PX domain containing serine/threonine kinase	AK028501|Pxk|218699|PX domain containing serine/threonine kinase	AK172347|Pxk|218699|PX domain containing serine/threonine kinase	AK166036|Pxk|218699|PX domain containing serine/threonine kinase	DQ095196|Pxk|218699|PX domain containing serine/threonine kinase	DQ095197|Pxk|218699|PX domain containing serine/threonine kinase
mm9_v1_chr10_-_17635007_17635085	0.782734	CRX.p2	BC094026|Heca|380629|headcase homolog (Drosophila)	AK134782|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr15_+_98929891_98929938	0.782578	CRX.p2	AK013323|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22	BC039633|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22	NM_176835|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22	AK050294|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22
mm9_v1_chr13_-_102462584_102462601	0.780028	CRX.p2	AK046259|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	NM_001024955|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr16_-_10314010_10314073	0.779287	CRX.p2	AK076194|Emp2|13731|epithelial membrane protein 2	AK077260|Emp2|13731|epithelial membrane protein 2	NM_007929|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr11_+_33947115_33947287	0.773638	CRX.p2	AK036727|Lcp2|16822|lymphocyte cytosolic protein 2	AK037970|Lcp2|16822|lymphocyte cytosolic protein 2	U20159|Lcp2|16822|lymphocyte cytosolic protein 2	AK168134|Lcp2|16822|lymphocyte cytosolic protein 2	AK153374|Lcp2|16822|lymphocyte cytosolic protein 2	BC006948|Lcp2|16822|lymphocyte cytosolic protein 2	NM_010696|Lcp2|16822|lymphocyte cytosolic protein 2
mm9_v1_chr3_+_95965959_95965978	0.770429	CRX.p2	BC051083|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr2_+_167757825_167757866	0.768286	CRX.p2	AK157431|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	NM_011201|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1	AK165567|Ptpn1|19246|protein tyrosine phosphatase, non-receptor type 1
mm9_v1_chr19_+_59017874_59017915	0.766338	CRX.p2	NM_178689|Eno4|226265|enolase 4	AK032395|Eno4|226265|enolase 4
mm9_v1_chr17_-_46900585_46900660	0.764642	CRX.p2	BC119062|Ptcra|19208|pre T-cell antigen receptor alpha	BC120746|Ptcra|19208|pre T-cell antigen receptor alpha	NM_011195|Ptcra|19208|pre T-cell antigen receptor alpha	U16958|Ptcra|19208|pre T-cell antigen receptor alpha
mm9_v1_chr7_-_147298872_147298960	0.763951	CRX.p2	BC057971|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	AK210204|Echs1|93747|enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
mm9_v1_chr3_-_14808320_14808364	0.761563	CRX.p2	BC132432|Car1|12346|carbonic anhydrase 1	BC132434|Car1|12346|carbonic anhydrase 1	M32452|Car1|12346|carbonic anhydrase 1	AK172076|Car1|12346|carbonic anhydrase 1	AK003066|Car1|12346|carbonic anhydrase 1	AK146372|Car1|12346|carbonic anhydrase 1	AK167969|Car1|12346|carbonic anhydrase 1	NM_009799|Car1|12346|carbonic anhydrase 1
mm9_v1_chr9_-_42072373_42072382	0.759333	CRX.p2	NM_172769|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chr4_-_129055233_129055271	0.758902	CRX.p2	AK010736|Zbtb8a|73680|zinc finger and BTB domain containing 8a	NM_028603|Zbtb8a|73680|zinc finger and BTB domain containing 8a
mm9_v1_chr15_+_44455984_44456003	0.757928	CRX.p2	AK004366|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AF076524|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9
mm9_v1_chr2_-_10052196_10052339	0.757016	CRX.p2	AK133782|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	BC034341|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	X70392|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	NM_010582|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2
mm9_v1_chr4_-_118162354_118162375	0.755416	CRX.p2	X71425|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X73960|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC057004|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC060182|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK052192|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK161898|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC046452|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr2_-_156005873_156005985	0.755187	CRX.p2	AY061882|Rbm39|170791|RNA binding motif protein 39	BC023205|Rbm39|170791|RNA binding motif protein 39	AK156737|Rbm39|170791|RNA binding motif protein 39	AK009719|Rbm39|170791|RNA binding motif protein 39	BC086645|Rbm39|170791|RNA binding motif protein 39	AK154989|Rbm39|170791|RNA binding motif protein 39	AK147076|Rbm39|170791|RNA binding motif protein 39	AK167355|Rbm39|170791|RNA binding motif protein 39	AK005227|Rbm39|170791|RNA binding motif protein 39	AK005234|Rbm39|170791|RNA binding motif protein 39	AK155976|Rbm39|170791|RNA binding motif protein 39	NM_133242|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr4_-_120624286_120624305	0.75165	CRX.p2	NM_001005788|Zfp69|381549|zinc finger protein 69
mm9_v1_chr4_-_141241630_141241630	0.749114	CRX.p2	BC150752|Rsc1a1|69994|regulatory solute carrier protein, family 1, member 1	NM_023544|Rsc1a1|69994|regulatory solute carrier protein, family 1, member 1
mm9_v1_chr6_+_4484651_4484672	0.747673	CRX.p2	AK159120|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr9_-_48772926_48773094	0.746461	CRX.p2	AF155045|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B	BC046990|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B	AK085213|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B	NM_020274|Htr3b|57014|5-hydroxytryptamine (serotonin) receptor 3B
mm9_v1_chr5_+_90889913_90889929	0.746209	CRX.p2	NM_009654|Alb|11657|albumin	AK131891|Alb|11657|albumin	AK160487|Alb|11657|albumin	AK010025|Alb|11657|albumin	AK050248|Alb|11657|albumin	AJ011413|Alb|11657|albumin
mm9_v1_chr11_-_69635657_69635766	0.745307	CRX.p2	BC100505|Spem1|74288|sperm maturation 1	BC048760|Spem1|74288|sperm maturation 1	EF120626|Spem1|74288|sperm maturation 1	NM_028855|Spem1|74288|sperm maturation 1	AK007080|Spem1|74288|sperm maturation 1
mm9_v1_chr5_+_104864168_104864178	0.742117	CRX.p2	AK151069|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr15_+_75427044_75427088	0.741074	CRX.p2	AK003305|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	AB095543|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	AK050431|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	BC061225|Gpihbp1|68453|GPI-anchored HDL-binding protein 1	NM_026730|Gpihbp1|68453|GPI-anchored HDL-binding protein 1
mm9_v1_chr18_-_10610261_10610307	0.736721	CRX.p2	BC151069|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC151077|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	BC172153|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm9_v1_chr4_+_99768482_99768534	0.736022	CRX.p2	AK046699|Ror1|26563|receptor tyrosine kinase-like orphan receptor 1
mm9_v1_chr18_+_85020800_85020860	0.735865	CRX.p2	BC024341|Cyb5|109672|cytochrome b-5	AK002426|Cyb5|109672|cytochrome b-5	AK013210|Cyb5|109672|cytochrome b-5	NM_025797|Cyb5|109672|cytochrome b-5
mm9_v1_chr2_-_121206675_121206675	0.735512	CRX.p2	AF375593|Strc|140476|stereocilin	NM_080459|Strc|140476|stereocilin
mm9_v1_chr11_-_49000546_49000590	0.734001	CRX.p2	AY177687|Btnl9|237754|butyrophilin-like 9	BC025540|Btnl9|237754|butyrophilin-like 9	BC150808|Btnl9|237754|butyrophilin-like 9	BC151155|Btnl9|237754|butyrophilin-like 9	AK080918|Btnl9|237754|butyrophilin-like 9	AK084528|Btnl9|237754|butyrophilin-like 9	NM_172793|Btnl9|237754|butyrophilin-like 9
mm9_v1_chr1_+_138521477_138521641	0.733225	CRX.p2	NM_001160251|Zfp281|226442|zinc finger protein 281	NM_177643|Zfp281|226442|zinc finger protein 281	BC003243|Zfp281|226442|zinc finger protein 281	BC062153|Zfp281|226442|zinc finger protein 281	AK157189|Zfp281|226442|zinc finger protein 281	AK142218|Zfp281|226442|zinc finger protein 281
mm9_v1_chr13_+_83643032_83643032	0.73303	CRX.p2	NM_001170537|Mef2c|17260|myocyte enhancer factor 2C	NM_025282|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr5_-_104406382_104406389	0.732255	CRX.p2	BC019427|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13
mm9_v1_chr4_+_137990567_137990674	0.72578	CRX.p2	NM_026689|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK170149|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK002416|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK083295|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	BC019516|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK044088|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK076419|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	AK153956|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1	EU935009|Mul1|68350|mitochondrial ubiquitin ligase activator of NFKB 1
mm9_v1_chr9_-_99610427_99610465	0.72495	CRX.p2	AF349450|Cldn18|56492|claudin 18	AF221068|Cldn18|56492|claudin 18
mm9_v1_chr5_+_88203590_88203597	0.724496	CRX.p2	AK164738|Csn1s2a|12993|casein alpha s2-like A	D10215|Csn1s2a|12993|casein alpha s2-like A	NM_007785|Csn1s2a|12993|casein alpha s2-like A	AK142688|Csn1s2a|12993|casein alpha s2-like A
mm9_v1_chr16_+_95924069_95924179	0.723122	CRX.p2	AK150175|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK014602|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005486|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	J04103|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005504|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK145852|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr3_+_142364014_142364083	0.722393	CRX.p2	AK145623|Ccbl2|229905|cysteine conjugate-beta lyase 2	AF363737|Ccbl2|229905|cysteine conjugate-beta lyase 2	AK049569|Ccbl2|229905|cysteine conjugate-beta lyase 2	NM_173763|Ccbl2|229905|cysteine conjugate-beta lyase 2	BC085287|Ccbl2|229905|cysteine conjugate-beta lyase 2
mm9_v1_chr9_-_70782366_70782427	0.721591	CRX.p2	AY228765|Lipc|15450|lipase, hepatic	X58426|Lipc|15450|lipase, hepatic	BC094050|Lipc|15450|lipase, hepatic
mm9_v1_chr3_-_129525375_129525422	0.715358	CRX.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr5_+_88095232_88095257	0.709846	CRX.p2	AK052808|Csn1s1|12990|casein alpha s1	AK085690|Csn1s1|12990|casein alpha s1	BC003859|Csn1s1|12990|casein alpha s1	BC006024|Csn1s1|12990|casein alpha s1	BC007192|Csn1s1|12990|casein alpha s1	BC008278|Csn1s1|12990|casein alpha s1	BC040246|Csn1s1|12990|casein alpha s1	NM_007784|Csn1s1|12990|casein alpha s1	BC002101|Csn1s1|12990|casein alpha s1
mm9_v1_chr11_-_99712918_99712918	0.709215	CRX.p2	BC016249|Krtap4-16|435285|keratin associated protein 4-16	NM_001013823|Krtap4-16|435285|keratin associated protein 4-16
mm9_v1_chr14_-_26886782_26886910	0.708144	CRX.p2	BC031854|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	AK002441|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	NM_026679|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed
mm9_v1_chr4_+_139200915_139200991	0.706202	CRX.p2	AK087796|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr7_+_27814096_27814122	0.705303	CRX.p2	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr14_+_122277821_122277919	0.704234	CRX.p2	NM_026861|Ubac2|68889|ubiquitin associated domain containing 2	BC024467|Ubac2|68889|ubiquitin associated domain containing 2	AK049109|Ubac2|68889|ubiquitin associated domain containing 2	AK158177|Ubac2|68889|ubiquitin associated domain containing 2
mm9_v1_chr7_-_134265516_134265584	0.704126	CRX.p2	BC011191|Qprt|67375|quinolinate phosphoribosyltransferase	NM_133686|Qprt|67375|quinolinate phosphoribosyltransferase	AK010602|Qprt|67375|quinolinate phosphoribosyltransferase	AK019119|Qprt|67375|quinolinate phosphoribosyltransferase
mm9_v1_chr6_-_69651268_69651335	0.703028	CRX.p2	
mm9_v1_chr17_+_80706746_80706746	0.700633	CRX.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr14_-_27026398_27026526	0.698895	CRX.p2	BC031854|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	AK002441|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	NM_026679|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed
mm9_v1_chr3_+_53267715_53267853	0.698041	CRX.p2	AK087909|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK038404|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	NM_173382|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK012908|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK161440|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr11_-_61534300_61534300	0.695932	CRX.p2	AK144033|Slc5a10|109342|solute carrier family 5 (sodium/glucose cotransporter), member 10	NM_001033227|Slc5a10|109342|solute carrier family 5 (sodium/glucose cotransporter), member 10
mm9_v1_chr3_-_144347983_144348061	0.69517	CRX.p2	
mm9_v1_chr3_-_144595486_144595494	0.693732	CRX.p2	BC139088|AI747448|99709|expressed sequence AI747448	BC139089|AI747448|99709|expressed sequence AI747448	AK136515|AI747448|99709|expressed sequence AI747448	NM_001033199|AI747448|99709|expressed sequence AI747448
mm9_v1_chr18_+_80403593_80403727	0.691226	CRX.p2	BC031634|Txnl4a|27366|thioredoxin-like 4A	BC014770|Txnl4a|27366|thioredoxin-like 4A	NM_001042408|Txnl4a|27366|thioredoxin-like 4A	AK011717|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr3_+_96449506_96449522	0.690778	CRX.p2	NM_001081053|Itga10|213119|integrin, alpha 10	BC115770|Itga10|213119|integrin, alpha 10
mm9_v1_chr9_+_102737229_102737361	0.69077	CRX.p2	L21707|Ryk|20187|receptor-like tyrosine kinase	NM_001042607|Ryk|20187|receptor-like tyrosine kinase	NM_013649|Ryk|20187|receptor-like tyrosine kinase	L02210|Ryk|20187|receptor-like tyrosine kinase	M98547|Ryk|20187|receptor-like tyrosine kinase	AK144355|Ryk|20187|receptor-like tyrosine kinase	L38394|Ryk|20187|receptor-like tyrosine kinase
mm9_v1_chr4_-_150421459_150421590	0.690194	CRX.p2	
mm9_v1_chr17_+_24544500_24544654	0.688543	CRX.p2	BC049911|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	BC056614|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr5_+_117570113_117570195	0.687971	CRX.p2	AK040531|Taok3|330177|TAO kinase 3	BC158072|Taok3|330177|TAO kinase 3
mm9_v1_chr12_+_83717883_83718024	0.687654	CRX.p2	AK139323|Rgs6|50779|regulator of G-protein signaling 6	AK052527|Rgs6|50779|regulator of G-protein signaling 6	NM_015812|Rgs6|50779|regulator of G-protein signaling 6
mm9_v1_chr4_+_122366498_122366501	0.684742	CRX.p2	NM_023865|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene
mm9_v1_chr3_-_49561168_49561243	0.681841	CRX.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr2_-_131855722_131855755	0.680454	CRX.p2	NM_175445|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr9_-_54041231_54041328	0.67604	CRX.p2	BC103670|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	BC104489|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	D00659|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	NM_007810|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	AK143323|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1
mm9_v1_chr11_-_115992196_115992441	0.675053	CRX.p2	BC118954|Trim65|338364|tripartite motif-containing 65	BC118955|Trim65|338364|tripartite motif-containing 65	AK028857|Trim65|338364|tripartite motif-containing 65	BC057094|Trim65|338364|tripartite motif-containing 65	AK050080|Trim65|338364|tripartite motif-containing 65	AK047439|Trim65|338364|tripartite motif-containing 65	AK079982|Trim65|338364|tripartite motif-containing 65	NM_178802|Trim65|338364|tripartite motif-containing 65
mm9_v1_chr3_+_93136665_93136689	0.669403	CRX.p2	AK004070|Hrnr|68723|hornerin
mm9_v1_chr10_-_41738158_41738199	0.668089	CRX.p2	AK011447|Armc2|213402|armadillo repeat containing 2	NM_001034858|Armc2|213402|armadillo repeat containing 2
mm9_v1_chr14_+_31692419_31692442	0.668005	CRX.p2	NM_181390|Mustn1|66175|musculoskeletal, embryonic nuclear protein 1
mm9_v1_chr3_-_58905678_58905742	0.666975	CRX.p2	AK154964|Gpr171|229323|G protein-coupled receptor 171	AK089287|Gpr171|229323|G protein-coupled receptor 171	BC024054|Gpr171|229323|G protein-coupled receptor 171	AK041381|Gpr171|229323|G protein-coupled receptor 171	AK041582|Gpr171|229323|G protein-coupled receptor 171	AK083323|Gpr171|229323|G protein-coupled receptor 171	AK089252|Gpr171|229323|G protein-coupled receptor 171	AK154725|Gpr171|229323|G protein-coupled receptor 171	AK079674|Gpr171|229323|G protein-coupled receptor 171	NM_173398|Gpr171|229323|G protein-coupled receptor 171
mm9_v1_chr5_+_121913189_121913205	0.666892	CRX.p2	NM_001161626|Tmem116|77462|transmembrane protein 116	NM_001161627|Tmem116|77462|transmembrane protein 116	BC019151|Tmem116|77462|transmembrane protein 116
mm9_v1_chr4_+_122366545_122366557	0.666633	CRX.p2	AY077734|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene	AK020534|9530002B09Rik|77432|RIKEN cDNA 9530002B09 gene
mm9_v1_chr7_-_88092627_88092644	0.665842	CRX.p2	BC057885|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr11_+_98219687_98219740	0.665305	CRX.p2	NM_021547|Stard3|59045|START domain containing 3	X82457|Stard3|59045|START domain containing 3	AK041538|Stard3|59045|START domain containing 3	AK150166|Stard3|59045|START domain containing 3	AK150254|Stard3|59045|START domain containing 3
mm9_v1_chr11_-_23670766_23670992	0.661946	CRX.p2	AK031627|Rel|19696|reticuloendotheliosis oncogene	BC139447|Rel|19696|reticuloendotheliosis oncogene	BC139448|Rel|19696|reticuloendotheliosis oncogene	BC139770|Rel|19696|reticuloendotheliosis oncogene	NM_009044|Rel|19696|reticuloendotheliosis oncogene	X60271|Rel|19696|reticuloendotheliosis oncogene
mm9_v1_chr7_+_27593910_27593945	0.660992	CRX.p2	BC046321|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	AK014160|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	BC058222|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	L81171|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	NM_013809|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1
mm9_v1_chr11_+_67508827_67508834	0.660618	CRX.p2	NM_009038|Rcvrn|19674|recoverin	X66196|Rcvrn|19674|recoverin	BC110564|Rcvrn|19674|recoverin
mm9_v1_chr11_+_98902810_98903140	0.660229	CRX.p2	
mm9_v1_chr4_+_149493452_149493452	0.659885	CRX.p2	AK029720|Slc2a5|56485|solute carrier family 2 (facilitated glucose transporter), member 5	NM_019741|Slc2a5|56485|solute carrier family 2 (facilitated glucose transporter), member 5
mm9_v1_chr16_+_95924061_95924067	0.659591	CRX.p2	AK128933|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK152750|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK143687|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK144974|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK151315|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153339|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153478|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr4_+_151699954_151699986	0.659324	CRX.p2	BC007139|Rpl22|19934|ribosomal protein L22	AK003022|Rpl22|19934|ribosomal protein L22	AK169731|Rpl22|19934|ribosomal protein L22	AK009094|Rpl22|19934|ribosomal protein L22	D17653|Rpl22|19934|ribosomal protein L22	AK168353|Rpl22|19934|ribosomal protein L22	AK169078|Rpl22|19934|ribosomal protein L22	BC021344|Rpl22|19934|ribosomal protein L22	NM_009079|Rpl22|19934|ribosomal protein L22
mm9_v1_chr11_+_70246079_70246238	0.658261	CRX.p2	AK150389|Arrb2|216869|arrestin, beta 2	AK170647|Arrb2|216869|arrestin, beta 2	AK089542|Arrb2|216869|arrestin, beta 2	AK162889|Arrb2|216869|arrestin, beta 2	AK159317|Arrb2|216869|arrestin, beta 2	NM_145429|Arrb2|216869|arrestin, beta 2	AK154874|Arrb2|216869|arrestin, beta 2	AK170889|Arrb2|216869|arrestin, beta 2	BC016642|Arrb2|216869|arrestin, beta 2
mm9_v1_chr4_-_131909584_131909605	0.657599	CRX.p2	BC100513|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr1_+_133534852_133534935	0.657377	CRX.p2	AK083315|Ctse|13034|cathepsin E	AK040175|Ctse|13034|cathepsin E	BC005432|Ctse|13034|cathepsin E	NM_007799|Ctse|13034|cathepsin E
mm9_v1_chr17_-_34976745_34976778	0.655884	CRX.p2	AK181557|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr6_-_5143755_5143945	0.655752	CRX.p2	BC012706|Pon1|18979|paraoxonase 1	U72636|Pon1|18979|paraoxonase 1	U32684|Pon1|18979|paraoxonase 1	NM_011134|Pon1|18979|paraoxonase 1
mm9_v1_chr9_+_45715013_45715102	0.652649	CRX.p2	AK165389|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK151980|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK148416|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	BC007322|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	U48830|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr10_-_62255007_62255115	0.652445	CRX.p2	BC034174|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC051052|Ccar1|67500|cell division cycle and apoptosis regulator 1	NM_026201|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr7_-_123174560_123174560	0.651126	CRX.p2	AK030713|Sox6|20679|SRY-box containing gene 6	NM_001025560|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr3_-_113061599_113061616	0.650045	CRX.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5
mm9_v1_chr11_+_102977638_102977680	0.647894	CRX.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr11_+_98219742_98219789	0.647072	CRX.p2	AK155124|Stard3|59045|START domain containing 3	BC058727|Stard3|59045|START domain containing 3	AK160480|Stard3|59045|START domain containing 3	BC003313|Stard3|59045|START domain containing 3
mm9_v1_chr3_+_93197619_93197620	0.646408	CRX.p2	AK009453|Rptn|20129|repetin	NM_009100|Rptn|20129|repetin
mm9_v1_chr1_+_145487825_145487990	0.64409	CRX.p2	AK036141|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_020025|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK034371|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK083168|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	AK080106|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC046322|B3galt2|26878|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm9_v1_chrX_+_106290703_106290922	0.643142	CRX.p2	BC043055|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	NM_019989|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK218315|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	BC034161|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151871|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK165995|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK146588|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK150604|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151095|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK049929|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151501|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AJ272504|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like
mm9_v1_chr5_-_76760118_76760180	0.640829	CRX.p2	AK133140|Pdcl2|79455|phosducin-like 2	AK005814|Pdcl2|79455|phosducin-like 2	NM_023508|Pdcl2|79455|phosducin-like 2	BC048432|Pdcl2|79455|phosducin-like 2	AK006773|Pdcl2|79455|phosducin-like 2	AK005602|Pdcl2|79455|phosducin-like 2	AK006040|Pdcl2|79455|phosducin-like 2	AK132738|Pdcl2|79455|phosducin-like 2
mm9_v1_chr16_+_95923988_95924060	0.64013	CRX.p2	NM_011809|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK038348|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr18_-_35658485_35658600	0.639629	CRX.p2	BC028488|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AJ297884|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AK170415|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016466|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	BC016119|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	NM_030749|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm9_v1_chr6_-_69557773_69557830	0.639625	CRX.p2	
mm9_v1_chr10_+_59764990_59765134	0.636808	CRX.p2	AK179432|Psap|19156|prosaposin	AK202324|Psap|19156|prosaposin	AK202355|Psap|19156|prosaposin
mm9_v1_chr4_-_41261874_41261885	0.635148	CRX.p2	AK005099|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK090028|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK030173|Dcaf12|68970|DDB1 and CUL4 associated factor 12	AK143635|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr18_+_80403500_80403576	0.634151	CRX.p2	AK010599|Txnl4a|27366|thioredoxin-like 4A	NM_001038608|Txnl4a|27366|thioredoxin-like 4A	NM_025299|Txnl4a|27366|thioredoxin-like 4A	AK148287|Txnl4a|27366|thioredoxin-like 4A	AK166497|Txnl4a|27366|thioredoxin-like 4A	BC029327|Txnl4a|27366|thioredoxin-like 4A	AK007331|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr5_+_116009516_116009532	0.633223	CRX.p2	AK012606|Rplp0|11837|ribosomal protein, large, P0	AK029816|Rplp0|11837|ribosomal protein, large, P0	AK161683|Rplp0|11837|ribosomal protein, large, P0	BC087887|Rplp0|11837|ribosomal protein, large, P0	BC089496|Rplp0|11837|ribosomal protein, large, P0	AK081678|Rplp0|11837|ribosomal protein, large, P0	AK002315|Rplp0|11837|ribosomal protein, large, P0	AK009767|Rplp0|11837|ribosomal protein, large, P0	AK010267|Rplp0|11837|ribosomal protein, large, P0	AK150448|Rplp0|11837|ribosomal protein, large, P0	AK159358|Rplp0|11837|ribosomal protein, large, P0	AK160541|Rplp0|11837|ribosomal protein, large, P0	AK166728|Rplp0|11837|ribosomal protein, large, P0	X15267|Rplp0|11837|ribosomal protein, large, P0	AK167240|Rplp0|11837|ribosomal protein, large, P0	BC003833|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr11_-_60624592_60624671	0.632885	CRX.p2	AF237702|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94478|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94479|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	BC026055|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK132342|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK010439|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr8_-_4105727_4105834	0.628181	CRX.p2	BC038121|Cd209f|69142|CD209f antigen	BC052782|Cd209f|69142|CD209f antigen	BC099497|Cd209f|69142|CD209f antigen	AK007638|Cd209f|69142|CD209f antigen	NM_026956|Cd209f|69142|CD209f antigen	BC021323|Cd209f|69142|CD209f antigen
mm9_v1_chr2_+_152695336_152695453	0.626253	CRX.p2	AK167030|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK011311|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr7_+_86955612_86955621	0.625963	CRX.p2	NM_008589|Mesp2|17293|mesoderm posterior 2	U71125|Mesp2|17293|mesoderm posterior 2
mm9_v1_chr2_+_72244049_72244137	0.62357	CRX.p2	AK137519|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene
mm9_v1_chr18_+_3435267_3435359	0.623441	CRX.p2	AK162910|Cul2|71745|cullin 2
mm9_v1_chr7_+_4866810_4866885	0.622365	CRX.p2	AK155214|Zfp628|232816|zinc finger protein 628	NM_170759|Zfp628|232816|zinc finger protein 628	AK048291|Zfp628|232816|zinc finger protein 628	BC056945|Zfp628|232816|zinc finger protein 628	BC062973|Zfp628|232816|zinc finger protein 628
mm9_v1_chr11_+_3863948_3864033	0.622089	CRX.p2	AK029075|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	NM_022889|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC004844|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC011142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK088831|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AF289539|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK220142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm9_v1_chr5_+_74042618_74042624	0.616384	CRX.p2	NM_178387|Spata18|73472|spermatogenesis associated 18	BC050799|Spata18|73472|spermatogenesis associated 18
mm9_v1_chrX_-_150130711_150130822	0.6163	CRX.p2	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr4_+_122911060_122911106	0.615411	CRX.p2	AK028596|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AK165078|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AK004697|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AK080822|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	BC130263|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like	AB093590|Heyl|56198|hairy/enhancer-of-split related with YRPW motif-like
mm9_v1_chr6_+_41810237_41810337	0.614535	CRX.p2	BC119343|Sval2|84543|seminal vesicle antigen-like 2	BC119345|Sval2|84543|seminal vesicle antigen-like 2	AB050614|Sval2|84543|seminal vesicle antigen-like 2	NM_032542|Sval2|84543|seminal vesicle antigen-like 2
mm9_v1_chr14_-_78488780_78488813	0.614354	CRX.p2	BC120488|AU021034|219170|expressed sequence AU021034	BC120490|AU021034|219170|expressed sequence AU021034	AK047611|AU021034|219170|expressed sequence AU021034	AK034132|AU021034|219170|expressed sequence AU021034	NM_177629|AU021034|219170|expressed sequence AU021034
mm9_v1_chr17_+_46297980_46297995	0.613654	CRX.p2	NM_001145979|Gtpbp2|56055|GTP binding protein 2	NM_019581|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chr11_+_68913653_68913659	0.612801	CRX.p2	AK148202|Per1|18626|period homolog 1 (Drosophila)	AK172958|Per1|18626|period homolog 1 (Drosophila)	NM_001159367|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr1_+_180117815_180117840	0.611665	CRX.p2	AK146492|Pppde1|78825|PPPDE peptidase domain containing 1	BC046816|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr9_+_54758322_54758381	0.611011	CRX.p2	AK038058|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chr7_+_19946564_19946602	0.610852	CRX.p2	AK170535|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	NM_001010836|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	AK146098|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	AY869711|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm9_v1_chr11_+_120534337_120534436	0.610606	CRX.p2	BC022115|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	BC019177|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	BC031153|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	AY349133|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	AK088197|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm9_v1_chr18_-_10610315_10610349	0.610061	CRX.p2	AK145333|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)	NM_001081222|Esco1|77805|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm9_v1_chr15_-_76500300_76500377	0.609621	CRX.p2	AF079514|Foxh1|14106|forkhead box H1	AF110506|Foxh1|14106|forkhead box H1	AF177770|Foxh1|14106|forkhead box H1	AB221574|Foxh1|14106|forkhead box H1	AF069303|Foxh1|14106|forkhead box H1	NM_007989|Foxh1|14106|forkhead box H1	BC119156|Foxh1|14106|forkhead box H1	BC137781|Foxh1|14106|forkhead box H1
mm9_v1_chr8_+_97269489_97269622	0.608791	CRX.p2	AF052505|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155083|Ccl22|20299|chemokine (C-C motif) ligand 22	AK156627|Ccl22|20299|chemokine (C-C motif) ligand 22	AK170080|Ccl22|20299|chemokine (C-C motif) ligand 22	NM_009137|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155764|Ccl22|20299|chemokine (C-C motif) ligand 22	BC012658|Ccl22|20299|chemokine (C-C motif) ligand 22	AF076596|Ccl22|20299|chemokine (C-C motif) ligand 22	AJ238238|Ccl22|20299|chemokine (C-C motif) ligand 22	AF163476|Ccl22|20299|chemokine (C-C motif) ligand 22
mm9_v1_chr8_+_116657473_116657573	0.607506	CRX.p2	AK088191|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	NM_024437|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	NM_024446|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AF338424|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK004924|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	BC069843|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK011172|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	BC033046|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK008824|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm9_v1_chr4_+_116366388_116366453	0.607408	CRX.p2	AK184215|Prdx1|18477|peroxiredoxin 1	AK184318|Prdx1|18477|peroxiredoxin 1
mm9_v1_chr19_+_11566527_11566537	0.607135	CRX.p2	NM_001164202|Gm8369|666926|predicted gene 8369
mm9_v1_chr6_-_137468412_137468417	0.604542	CRX.p2	AK165684|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr19_-_5388655_5388722	0.604067	CRX.p2	AB014721|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	AK088341|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	BC028823|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	BC051394|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	AF129931|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	NM_016882|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1
mm9_v1_chr6_-_113481546_113481673	0.603509	CRX.p2	AK020058|Tmem111|66087|transmembrane protein 111	AK046264|Tmem111|66087|transmembrane protein 111	BC004641|Tmem111|66087|transmembrane protein 111	AK075595|Tmem111|66087|transmembrane protein 111	NM_175101|Tmem111|66087|transmembrane protein 111	AK164779|Tmem111|66087|transmembrane protein 111
mm9_v1_chr11_-_69651218_69651315	0.600418	CRX.p2	AK136883|Nlgn2|216856|neuroligin 2
mm9_v1_chr18_+_44122894_44122922	0.600086	CRX.p2	AK035690|Spink5|72432|serine peptidase inhibitor, Kazal type 5	AK036804|Spink5|72432|serine peptidase inhibitor, Kazal type 5	AK162690|Spink5|72432|serine peptidase inhibitor, Kazal type 5	NM_001081180|Spink5|72432|serine peptidase inhibitor, Kazal type 5	AJ426449|Spink5|72432|serine peptidase inhibitor, Kazal type 5	BC118011|Spink5|72432|serine peptidase inhibitor, Kazal type 5
mm9_v1_chr11_-_99520272_99520272	0.599341	CRX.p2	NM_001126320|Gm11563|100040248|predicted gene 11563
mm9_v1_chr2_+_152253202_152253368	0.596472	CRX.p2	BC144945|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC137826|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC144943|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	BC144944|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene
mm9_v1_chr17_+_71965554_71965636	0.596331	CRX.p2	NM_175639|Wdr43|72515|WD repeat domain 43	AK012043|Wdr43|72515|WD repeat domain 43	AK152321|Wdr43|72515|WD repeat domain 43	AK032907|Wdr43|72515|WD repeat domain 43	AK080660|Wdr43|72515|WD repeat domain 43	AK129031|Wdr43|72515|WD repeat domain 43
mm9_v1_chr5_+_116009475_116009502	0.594935	CRX.p2	NM_007475|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr1_-_82765022_82765035	0.588627	CRX.p2	BC117736|Tm4sf20|66261|transmembrane 4 L six family member 20	AK007532|Tm4sf20|66261|transmembrane 4 L six family member 20	AK017154|Tm4sf20|66261|transmembrane 4 L six family member 20	AK017195|Tm4sf20|66261|transmembrane 4 L six family member 20	NM_025453|Tm4sf20|66261|transmembrane 4 L six family member 20	AK017209|Tm4sf20|66261|transmembrane 4 L six family member 20
mm9_v1_chr11_+_68316520_68316601	0.588154	CRX.p2	NM_001004435|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	NM_001081566|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK169948|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK036623|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	BC028998|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK171063|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK151178|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6	AK153039|Pik3r6|104709|phosphoinositide-3-kinase, regulatory subunit 6
mm9_v1_chr8_-_97830469_97830484	0.586827	CRX.p2	AK080705|Cngb1|333329|cyclic nucleotide gated channel beta 1	BC016201|Cngb1|333329|cyclic nucleotide gated channel beta 1	HQ116386|Cngb1|333329|cyclic nucleotide gated channel beta 1	NM_001195413|Cngb1|333329|cyclic nucleotide gated channel beta 1	NM_145601|Cngb1|333329|cyclic nucleotide gated channel beta 1
mm9_v1_chr9_-_53012444_53012529	0.58676	CRX.p2	AK166787|Ddx10|77591|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
mm9_v1_chr17_+_24546733_24546845	0.583734	CRX.p2	BC038271|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr7_+_34880449_34880449	0.581276	CRX.p2	NM_001099330|Gm12776|100043868|predicted gene 12776
mm9_v1_chr10_-_116333934_116333934	0.578961	CRX.p2	AK144383|Gm239|237558|predicted gene 239	AK144411|Gm239|237558|predicted gene 239	NM_001033333|Gm239|237558|predicted gene 239
mm9_v1_chr10_-_39679957_39679963	0.577032	CRX.p2	AK144527|G630090E17Rik|100041085|RIKEN cDNA G630090E17 gene	NM_001173500|G630090E17Rik|100041085|RIKEN cDNA G630090E17 gene
mm9_v1_chr1_+_109258889_109258923	0.574779	CRX.p2	AK009003|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	AK009855|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	NM_025867|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	BC010313|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm9_v1_chr16_+_20517042_20517258	0.573864	CRX.p2	U41285|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	AK052151|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	NM_007889|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	BC033414|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)
mm9_v1_chr4_-_118951578_118951709	0.573854	CRX.p2	AK213628|Ybx1|22608|Y box protein 1	AK181881|Ybx1|22608|Y box protein 1	AK197905|Ybx1|22608|Y box protein 1
mm9_v1_chr2_+_32583221_32583245	0.573277	CRX.p2	AK042709|Sh2d3c|27387|SH2 domain containing 3C	AK085885|Sh2d3c|27387|SH2 domain containing 3C	AK135231|Sh2d3c|27387|SH2 domain containing 3C	AB030442|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr2_-_60590923_60591029	0.573053	CRX.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr4_+_115761660_115761879	0.570276	CRX.p2	BC007169|Lrrc41|230654|leucine rich repeat containing 41	AK181367|Lrrc41|230654|leucine rich repeat containing 41
mm9_v1_chr4_+_118867914_118868129	0.568729	CRX.p2	NM_024462|Ccdc23|69216|coiled-coil domain containing 23	AK010418|Ccdc23|69216|coiled-coil domain containing 23	BC002274|Ccdc23|69216|coiled-coil domain containing 23	AK079783|Ccdc23|69216|coiled-coil domain containing 23	NM_001038998|Ccdc23|69216|coiled-coil domain containing 23
mm9_v1_chr17_+_35670145_35670217	0.56773	CRX.p2	AK137759|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	NM_020576|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	AF484421|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	AF159091|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)	BC110561|Psors1c2|57390|psoriasis susceptibility 1 candidate 2 (human)
mm9_v1_chr9_-_44059496_44059546	0.565769	CRX.p2	AF334612|Pdzd3|170761|PDZ domain containing 3	AK052748|Pdzd3|170761|PDZ domain containing 3	NM_133226|Pdzd3|170761|PDZ domain containing 3
mm9_v1_chr1_-_141456740_141456821	0.564904	CRX.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr6_+_129347314_129347343	0.56458	CRX.p2	BC064054|Clec1b|56760|C-type lectin domain family 1, member b	NM_019985|Clec1b|56760|C-type lectin domain family 1, member b	AK007925|Clec1b|56760|C-type lectin domain family 1, member b
mm9_v1_chr17_-_33918501_33918527	0.564412	CRX.p2	AK014564|Angptl4|57875|angiopoietin-like 4	NM_020581|Angptl4|57875|angiopoietin-like 4
mm9_v1_chr6_+_65902564_65902776	0.564247	CRX.p2	NM_001161773|4930544G11Rik|67653|RIKEN cDNA 4930544G11 gene	AK016035|4930544G11Rik|67653|RIKEN cDNA 4930544G11 gene	AK006363|4930544G11Rik|67653|RIKEN cDNA 4930544G11 gene	BC107181|4930544G11Rik|67653|RIKEN cDNA 4930544G11 gene	BC107182|4930544G11Rik|67653|RIKEN cDNA 4930544G11 gene	EU477372|4930544G11Rik|67653|RIKEN cDNA 4930544G11 gene
mm9_v1_chr11_+_102526898_102526901	0.564151	CRX.p2	AK163979|Gm1564|268491|predicted gene 1564	NM_001127576|Gm1564|268491|predicted gene 1564
mm9_v1_chr17_+_37330836_37330896	0.562109	CRX.p2	AK008116|Ubd|24108|ubiquitin D	NM_023137|Ubd|24108|ubiquitin D	AK008552|Ubd|24108|ubiquitin D	BC027627|Ubd|24108|ubiquitin D	BC036383|Ubd|24108|ubiquitin D	CT010257|Ubd|24108|ubiquitin D
mm9_v1_chr6_+_113187821_113187914	0.560883	CRX.p2	NM_026849|Mtmr14|97287|myotubularin related protein 14	AK161445|Mtmr14|97287|myotubularin related protein 14	BC018294|Mtmr14|97287|myotubularin related protein 14	AK034867|Mtmr14|97287|myotubularin related protein 14
mm9_v1_chr8_-_72433344_72433376	0.560875	CRX.p2	AK004386|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chrX_+_71669933_71669950	0.558871	CRX.p2	AY112937|Ikbkg|16151|inhibitor of kappaB kinase gamma	NM_001136067|Ikbkg|16151|inhibitor of kappaB kinase gamma	NM_001161421|Ikbkg|16151|inhibitor of kappaB kinase gamma
mm9_v1_chr12_-_81269174_81269180	0.558108	CRX.p2	AK037382|Actn1|109711|actinin, alpha 1
mm9_v1_chr1_-_71642303_71642315	0.557982	CRX.p2	BC004724|Fn1|14268|fibronectin 1
mm9_v1_chr15_+_10930475_10930567	0.557179	CRX.p2	AK029155|Slc45a2|22293|solute carrier family 45, member 2	NM_053077|Slc45a2|22293|solute carrier family 45, member 2	AK148207|Slc45a2|22293|solute carrier family 45, member 2	BC125376|Slc45a2|22293|solute carrier family 45, member 2	BC132429|Slc45a2|22293|solute carrier family 45, member 2	AK089932|Slc45a2|22293|solute carrier family 45, member 2	AY034377|Slc45a2|22293|solute carrier family 45, member 2	AF360357|Slc45a2|22293|solute carrier family 45, member 2
mm9_v1_chr7_-_125999511_125999511	0.556251	CRX.p2	AK006113|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	NM_001168218|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	NM_001168219|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	NM_023197|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene
mm9_v1_chr4_-_41261743_41261803	0.55452	CRX.p2	AK173289|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr15_+_78861295_78861336	0.553771	CRX.p2	BC024107|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	NM_001161712|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	NM_013847|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK076469|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm9_v1_chr13_-_67552515_67552559	0.552629	CRX.p2	BC080824|Zfp874a|238692|zinc finger protein 874a	AK136394|Zfp874a|238692|zinc finger protein 874a	AK049183|Zfp874a|238692|zinc finger protein 874a	AK145787|Zfp874a|238692|zinc finger protein 874a	NM_177712|Zfp874a|238692|zinc finger protein 874a
mm9_v1_chr17_-_43639675_43639721	0.551601	CRX.p2	AK143906|Mep1a|17287|meprin 1 alpha	AK164734|Mep1a|17287|meprin 1 alpha	AK093914|Mep1a|17287|meprin 1 alpha	M74897|Mep1a|17287|meprin 1 alpha	BC015258|Mep1a|17287|meprin 1 alpha	NM_008585|Mep1a|17287|meprin 1 alpha
mm9_v1_chr8_-_98377390_98377440	0.550018	CRX.p2	AK052548|Slc38a7|234595|solute carrier family 38, member 7	NM_172758|Slc38a7|234595|solute carrier family 38, member 7	AK195271|Slc38a7|234595|solute carrier family 38, member 7	AK171137|Slc38a7|234595|solute carrier family 38, member 7
mm9_v1_chr11_+_54911540_54911679	0.546463	CRX.p2	AK149642|Gm2a|14667|GM2 ganglioside activator protein	AK152256|Gm2a|14667|GM2 ganglioside activator protein	U09816|Gm2a|14667|GM2 ganglioside activator protein	BC004651|Gm2a|14667|GM2 ganglioside activator protein	NM_010299|Gm2a|14667|GM2 ganglioside activator protein	L19526|Gm2a|14667|GM2 ganglioside activator protein	CT010289|Gm2a|14667|GM2 ganglioside activator protein	AK179394|Gm2a|14667|GM2 ganglioside activator protein	AK181597|Gm2a|14667|GM2 ganglioside activator protein
mm9_v1_chr14_-_52857246_52857246	0.54643	CRX.p2	AY863219|Chd8|67772|chromodomain helicase DNA binding protein 8	DQ190419|Chd8|67772|chromodomain helicase DNA binding protein 8	NM_201637|Chd8|67772|chromodomain helicase DNA binding protein 8
mm9_v1_chr11_+_20991293_20991320	0.54615	CRX.p2	AK020915|Peli1|67245|pellino 1
mm9_v1_chr13_-_23635220_23635312	0.544437	CRX.p2	NM_178197|Hist1h2bh|319182|histone cluster 1, H2bh	BC092138|Hist1h2bh|319182|histone cluster 1, H2bh	AK158416|Hist1h2bh|319182|histone cluster 1, H2bh	BC132584|Hist1h2bh|319182|histone cluster 1, H2bh	BC132586|Hist1h2bh|319182|histone cluster 1, H2bh
mm9_v1_chr5_-_136220001_136220150	0.543477	CRX.p2	BC046757|Tmem120a|215210|transmembrane protein 120A	AK028119|Tmem120a|215210|transmembrane protein 120A	NM_172541|Tmem120a|215210|transmembrane protein 120A
mm9_v1_chr11_-_120657647_120657730	0.543189	CRX.p2	AK147967|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK037538|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK148307|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK088243|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	NM_026824|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)
mm9_v1_chr8_-_113824073_113824198	0.542135	CRX.p2	AK137698|Rfwd3|234736|ring finger and WD repeat domain 3	BC096602|Rfwd3|234736|ring finger and WD repeat domain 3	AK146451|Rfwd3|234736|ring finger and WD repeat domain 3	BC018533|Rfwd3|234736|ring finger and WD repeat domain 3	AK137499|Rfwd3|234736|ring finger and WD repeat domain 3	AK139032|Rfwd3|234736|ring finger and WD repeat domain 3	BC023694|Rfwd3|234736|ring finger and WD repeat domain 3	NM_146218|Rfwd3|234736|ring finger and WD repeat domain 3
mm9_v1_chr5_-_86898014_86898014	0.541392	CRX.p2	AK142820|Tmprss11a|194597|transmembrane protease, serine 11a	NM_001033233|Tmprss11a|194597|transmembrane protease, serine 11a
mm9_v1_chr16_+_89031943_89031945	0.538307	CRX.p2	BC107313|Krtap6-1|16700|keratin associated protein 6-1	BC107314|Krtap6-1|16700|keratin associated protein 6-1	BC127045|Krtap6-1|16700|keratin associated protein 6-1	BC127046|Krtap6-1|16700|keratin associated protein 6-1	D86420|Krtap6-1|16700|keratin associated protein 6-1	NM_010672|Krtap6-1|16700|keratin associated protein 6-1	BC114404|Krtap6-1|16700|keratin associated protein 6-1	BC114532|Krtap6-1|16700|keratin associated protein 6-1
mm9_v1_chr7_+_29573987_29573995	0.53785	CRX.p2	BC044761|Rinl|320435|Ras and Rab interactor-like	BC046530|Rinl|320435|Ras and Rab interactor-like	NM_177158|Rinl|320435|Ras and Rab interactor-like	AK020687|Rinl|320435|Ras and Rab interactor-like	AK030993|Rinl|320435|Ras and Rab interactor-like
mm9_v1_chr8_+_74094553_74094637	0.537397	CRX.p2	AK138548|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	AK155185|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	U15976|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	AK164798|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr7_-_112900699_112900744	0.537343	CRX.p2	AJ011912|Tpp1|12751|tripeptidyl peptidase I	BC024820|Tpp1|12751|tripeptidyl peptidase I	AK170781|Tpp1|12751|tripeptidyl peptidase I	AK146759|Tpp1|12751|tripeptidyl peptidase I	AK048279|Tpp1|12751|tripeptidyl peptidase I	NM_009906|Tpp1|12751|tripeptidyl peptidase I	AK083832|Tpp1|12751|tripeptidyl peptidase I	AK169924|Tpp1|12751|tripeptidyl peptidase I	AF111172|Tpp1|12751|tripeptidyl peptidase I	AK155021|Tpp1|12751|tripeptidyl peptidase I	AK002418|Tpp1|12751|tripeptidyl peptidase I	AK165669|Tpp1|12751|tripeptidyl peptidase I
mm9_v1_chr17_+_27693518_27693641	0.537154	CRX.p2	NM_001025427|Hmga1|15361|high mobility group AT-hook 1	NM_001039356|Hmga1|15361|high mobility group AT-hook 1	NM_001166535|Hmga1|15361|high mobility group AT-hook 1	NM_001166536|Hmga1|15361|high mobility group AT-hook 1	NM_001166539|Hmga1|15361|high mobility group AT-hook 1	NM_001166540|Hmga1|15361|high mobility group AT-hook 1	NM_001166541|Hmga1|15361|high mobility group AT-hook 1	NM_001166542|Hmga1|15361|high mobility group AT-hook 1	NM_001166543|Hmga1|15361|high mobility group AT-hook 1	NM_001166544|Hmga1|15361|high mobility group AT-hook 1	NM_001166545|Hmga1|15361|high mobility group AT-hook 1	NM_001166546|Hmga1|15361|high mobility group AT-hook 1	NM_001166537|Hmga1|15361|high mobility group AT-hook 1	NM_016660|Hmga1|15361|high mobility group AT-hook 1	AK171334|Hmga1|15361|high mobility group AT-hook 1	AK155661|Hmga1|15361|high mobility group AT-hook 1	BC013455|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	AK010617|Hmga1|15361|high mobility group AT-hook 1	AK169783|Hmga1|15361|high mobility group AT-hook 1	NM_001166476|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	NM_001166477|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	AK154957|Hmga1|15361|high mobility group AT-hook 1	AK160036|Hmga1|15361|high mobility group AT-hook 1	BC008125|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1	BC093496|Hmga1-rs1|111241|high mobility group AT-hook I, related sequence 1
mm9_v1_chr1_+_135247122_135247142	0.535595	CRX.p2	NM_031193|Ren2|19702|renin 2 tandem duplication of Ren1
mm9_v1_chr4_+_125773896_125773946	0.533697	CRX.p2	NM_001163266|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	NM_138721|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr15_-_79558379_79558491	0.527648	CRX.p2	AK047688|Sun2|223697|Sad1 and UNC84 domain containing 2
mm9_v1_chr10_+_59764681_59764775	0.527439	CRX.p2	AK177739|Psap|19156|prosaposin	AK184913|Psap|19156|prosaposin	AK186657|Psap|19156|prosaposin	AK200316|Psap|19156|prosaposin	AK200829|Psap|19156|prosaposin	AK206879|Psap|19156|prosaposin	AK209964|Psap|19156|prosaposin	AK212335|Psap|19156|prosaposin	AK218028|Psap|19156|prosaposin	AK193227|Psap|19156|prosaposin	AK194685|Psap|19156|prosaposin
mm9_v1_chr15_-_98051384_98051486	0.52722	CRX.p2	AK039376|Olfr287|634104|olfactory receptor 287	NM_001011780|Olfr287|634104|olfactory receptor 287
mm9_v1_chr1_-_174825067_174825072	0.526222	CRX.p2	AK144248|Apcs|20219|serum amyloid P-component	AK165699|Apcs|20219|serum amyloid P-component
mm9_v1_chr5_-_87911282_87911282	0.525449	CRX.p2	BC048920|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	BC058786|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	NM_001024148|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2
mm9_v1_chr4_-_42679293_42679294	0.52542	CRX.p2	NM_001099348|Gm13305|100042555|predicted gene 13305	NM_001100596|Gm2002|100038993|predicted gene 2002	NM_010550|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	U69491|Il11ra2|16158|interleukin 11 receptor, alpha chain 2	X98519|Il11ra2|16158|interleukin 11 receptor, alpha chain 2
mm9_v1_chr3_-_137794277_137794364	0.52075	CRX.p2	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chr14_+_52730577_52730615	0.518825	CRX.p2	BC081545|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_001168515|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_023879|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK020800|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK044753|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY008297|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY914560|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC086692|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC016092|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1
mm9_v1_chr15_+_99800504_99800504	0.518687	CRX.p2	AK139636|Larp4|207214|La ribonucleoprotein domain family, member 4	NM_001080948|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr12_+_112655640_112655799	0.518436	CRX.p2	NM_028807|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene	AK004674|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene	BC075664|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene
mm9_v1_chr10_-_92773579_92773713	0.516827	CRX.p2	AK052546|Elk3|13713|ELK3, member of ETS oncogene family	S82864|Elk3|13713|ELK3, member of ETS oncogene family	AK133847|Elk3|13713|ELK3, member of ETS oncogene family	BC053402|Elk3|13713|ELK3, member of ETS oncogene family	BC055735|Elk3|13713|ELK3, member of ETS oncogene family	AK088129|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chr12_+_85328810_85328840	0.515575	CRX.p2	NM_134188|Acot2|171210|acyl-CoA thioesterase 2	AK172617|Acot2|171210|acyl-CoA thioesterase 2	AK141651|Acot2|171210|acyl-CoA thioesterase 2	BC064469|Acot2|171210|acyl-CoA thioesterase 2
mm9_v1_chr16_+_3838974_3838976	0.515146	CRX.p2	NM_008762|Olfr15|18312|olfactory receptor 15	BC100680|Olfr15|18312|olfactory receptor 15	BC100685|Olfr15|18312|olfactory receptor 15	BC115838|Olfr15|18312|olfactory receptor 15	BC100679|Olfr15|18312|olfactory receptor 15
mm9_v1_chr1_+_88199795_88199833	0.514536	CRX.p2	NM_145222|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AK080081|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AF502429|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm9_v1_chr5_-_88020575_88020635	0.513879	CRX.p2	BC034891|Sult1e1|20860|sulfotransferase family 1E, member 1	AK015750|Sult1e1|20860|sulfotransferase family 1E, member 1	S78182|Sult1e1|20860|sulfotransferase family 1E, member 1	NM_023135|Sult1e1|20860|sulfotransferase family 1E, member 1
mm9_v1_chr7_+_52471161_52471287	0.511597	CRX.p2	AK144857|Tead2|21677|TEA domain family member 2	AK146595|Tead2|21677|TEA domain family member 2	AK132009|Tead2|21677|TEA domain family member 2	Y10026|Tead2|21677|TEA domain family member 2	AK137064|Tead2|21677|TEA domain family member 2	AK143155|Tead2|21677|TEA domain family member 2
mm9_v1_chr10_+_59765201_59765253	0.511354	CRX.p2	
mm9_v1_chr5_-_31504348_31504414	0.511318	CRX.p2	AK154195|Zfp513|101023|zinc finger protein 513	NM_001177901|Zfp513|101023|zinc finger protein 513
mm9_v1_chr6_-_129457171_129457184	0.508722	CRX.p2	AF303744|Olr1|108078|oxidized low density lipoprotein (lectin-like) receptor 1	AK154687|Olr1|108078|oxidized low density lipoprotein (lectin-like) receptor 1	AK160919|Olr1|108078|oxidized low density lipoprotein (lectin-like) receptor 1	NM_138648|Olr1|108078|oxidized low density lipoprotein (lectin-like) receptor 1
mm9_v1_chr1_+_87423176_87423243	0.507358	CRX.p2	AK156961|Csprs|114564|component of Sp100-rs
mm9_v1_chrX_+_7274259_7274353	0.507185	CRX.p2	NM_173747|Gpkow|209416|G patch domain and KOW motifs	AK017864|Gpkow|209416|G patch domain and KOW motifs	AK144167|Gpkow|209416|G patch domain and KOW motifs	AK028433|Gpkow|209416|G patch domain and KOW motifs	BC092224|Gpkow|209416|G patch domain and KOW motifs
mm9_v1_chr7_-_53987912_53987980	0.506091	CRX.p2	NM_011316|Saa4|20211|serum amyloid A 4	U02554|Saa4|20211|serum amyloid A 4
mm9_v1_chr11_-_6171453_6171670	0.504704	CRX.p2	AK003613|Tmed4|103694|transmembrane emp24 protein transport domain containing 4
mm9_v1_chr17_-_46339543_46339578	0.504366	CRX.p2	BC049159|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	BC128366|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	AK036296|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	NM_030715|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	AB027128|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)
mm9_v1_chr6_-_136870688_136870700	0.504059	CRX.p2	BC104406|Erp27|69187|endoplasmic reticulum protein 27	BC104407|Erp27|69187|endoplasmic reticulum protein 27	AK007684|Erp27|69187|endoplasmic reticulum protein 27	AK007800|Erp27|69187|endoplasmic reticulum protein 27	AK131830|Erp27|69187|endoplasmic reticulum protein 27	NM_026983|Erp27|69187|endoplasmic reticulum protein 27
mm9_v1_chr10_+_80599005_80599015	0.503524	CRX.p2	BC024815|Zbtb7a|16969|zinc finger and BTB domain containing 7a	NM_010731|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr14_+_55634290_55634413	0.502655	CRX.p2	NM_026890|Ngdn|68966|neuroguidin, EIF4E binding protein	BC052790|Ngdn|68966|neuroguidin, EIF4E binding protein	EF437387|Ngdn|68966|neuroguidin, EIF4E binding protein	AK005098|Ngdn|68966|neuroguidin, EIF4E binding protein
mm9_v1_chr11_+_94491055_94491166	0.501936	CRX.p2	AK159374|Lrrc59|98238|leucine rich repeat containing 59	AK159552|Lrrc59|98238|leucine rich repeat containing 59	AK166576|Lrrc59|98238|leucine rich repeat containing 59	AK053450|Lrrc59|98238|leucine rich repeat containing 59	BC006877|Lrrc59|98238|leucine rich repeat containing 59	NM_133807|Lrrc59|98238|leucine rich repeat containing 59	AK169390|Lrrc59|98238|leucine rich repeat containing 59	BC066172|Lrrc59|98238|leucine rich repeat containing 59	AK167604|Lrrc59|98238|leucine rich repeat containing 59	AK169250|Lrrc59|98238|leucine rich repeat containing 59
mm9_v1_chr8_-_109589522_109589543	0.498662	CRX.p2	AK007830|Tmed6|66269|transmembrane emp24 protein transport domain containing 6	AK007320|Tmed6|66269|transmembrane emp24 protein transport domain containing 6	AK007518|Tmed6|66269|transmembrane emp24 protein transport domain containing 6	AK007885|Tmed6|66269|transmembrane emp24 protein transport domain containing 6	BC086923|Tmed6|66269|transmembrane emp24 protein transport domain containing 6	NM_025458|Tmed6|66269|transmembrane emp24 protein transport domain containing 6
mm9_v1_chr4_-_60736086_60736197	0.498327	CRX.p2	AJ309921|Mup10|100039008|major urinary protein 10	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	M16355|Mup1|17840|major urinary protein 1
mm9_v1_chr10_+_127675120_127675121	0.497392	CRX.p2	AF098161|Timeless|21853|timeless homolog (Drosophila)	NM_011589|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr2_+_158328394_158328478	0.496227	CRX.p2	AK131610|Adig|246747|adipogenin	BC054059|Adig|246747|adipogenin	DQ223719|Adig|246747|adipogenin
mm9_v1_chr11_-_60624733_60624766	0.495766	CRX.p2	NM_009171|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr1_+_36568707_36568722	0.495125	CRX.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr18_-_46440360_46440503	0.494879	CRX.p2	AK028188|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	AK170240|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	BC141021|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	AK081731|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	NM_172627|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit
mm9_v1_chr7_+_20104079_20104079	0.492468	CRX.p2	BC118925|Nkpd1|69547|NTPase, KAP family P-loop domain containing 1	NM_027116|Nkpd1|69547|NTPase, KAP family P-loop domain containing 1
mm9_v1_chr2_-_93662687_93662734	0.491443	CRX.p2	BC006597|Ext2|14043|exostoses (multiple) 2	U67837|Ext2|14043|exostoses (multiple) 2	U72141|Ext2|14043|exostoses (multiple) 2	AK152265|Ext2|14043|exostoses (multiple) 2	AK152840|Ext2|14043|exostoses (multiple) 2	AK082572|Ext2|14043|exostoses (multiple) 2	AK084772|Ext2|14043|exostoses (multiple) 2	AK164342|Ext2|14043|exostoses (multiple) 2	AK148090|Ext2|14043|exostoses (multiple) 2	AK150155|Ext2|14043|exostoses (multiple) 2	NM_010163|Ext2|14043|exostoses (multiple) 2
mm9_v1_chr19_+_11822048_11822136	0.491155	CRX.p2	AK078933|Gif|14603|gastric intrinsic factor	NM_008118|Gif|14603|gastric intrinsic factor	BC118519|Gif|14603|gastric intrinsic factor	L24191|Gif|14603|gastric intrinsic factor
mm9_v1_chr11_+_120534286_120534318	0.489439	CRX.p2	NM_026877|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm9_v1_chr2_-_25066706_25067008	0.488254	CRX.p2	AK087524|Cobra1|58202|cofactor of BRCA1	AK080419|Cobra1|58202|cofactor of BRCA1	AK214490|Cobra1|58202|cofactor of BRCA1	BC004762|Cobra1|58202|cofactor of BRCA1	AB041607|Cobra1|58202|cofactor of BRCA1	AK046129|Cobra1|58202|cofactor of BRCA1	NM_021393|Cobra1|58202|cofactor of BRCA1
mm9_v1_chr12_+_75028976_75029036	0.485931	CRX.p2	AK076395|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr17_+_35689072_35689090	0.485048	CRX.p2	NM_001008424|Cdsn|386463|corneodesmosin	BC055373|Cdsn|386463|corneodesmosin
mm9_v1_chr11_+_119464299_119464363	0.484673	CRX.p2	AK087217|Rptor|74370|regulatory associated protein of MTOR, complex 1	NM_028898|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK029341|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK144082|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK172276|Rptor|74370|regulatory associated protein of MTOR, complex 1
mm9_v1_chr4_+_13678443_13678575	0.484524	CRX.p2	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr19_-_7785715_7785799	0.484239	CRX.p2	AF529221|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	BC021384|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052752|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052603|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	NM_144785|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19
mm9_v1_chr6_-_70868896_70868915	0.482838	CRX.p2	BC049736|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene	AK005862|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene	NM_028825|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene
mm9_v1_chr5_+_13791618_13791631	0.481025	CRX.p2	NM_027650|Speer3|71026|spermatogenesis associated glutamate (E)-rich protein 3	AK016676|Speer3|71026|spermatogenesis associated glutamate (E)-rich protein 3
mm9_v1_chr5_+_143419271_143419286	0.479526	CRX.p2	BC016201|Cngb1|333329|cyclic nucleotide gated channel beta 1	NM_145601|Cngb1|333329|cyclic nucleotide gated channel beta 1	AK080705|Cngb1|333329|cyclic nucleotide gated channel beta 1
mm9_v1_chr6_-_50604391_50604439	0.4761	CRX.p2	AB040289|Npvf|60531|neuropeptide VF precursor	AF330058|Npvf|60531|neuropeptide VF precursor	NM_021892|Npvf|60531|neuropeptide VF precursor	AK138200|Npvf|60531|neuropeptide VF precursor	BC116905|Npvf|60531|neuropeptide VF precursor	BC116907|Npvf|60531|neuropeptide VF precursor
mm9_v1_chr19_+_47142217_47142252	0.475926	CRX.p2	AK031985|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK088953|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_177342|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK169453|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr3_+_90318894_90318921	0.475839	CRX.p2	X99921|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr7_-_3567703_3567758	0.475219	CRX.p2	BC137776|Oscar|232790|osteoclast associated receptor	AF391159|Oscar|232790|osteoclast associated receptor	AF391161|Oscar|232790|osteoclast associated receptor	NM_175632|Oscar|232790|osteoclast associated receptor	AF391160|Oscar|232790|osteoclast associated receptor
mm9_v1_chr19_-_11735008_11735048	0.474806	CRX.p2	BC099498|Plac1l|225922|placenta-specific 1-like	AK143411|Plac1l|225922|placenta-specific 1-like	NM_001037634|Plac1l|225922|placenta-specific 1-like
mm9_v1_chr7_+_31497227_31497370	0.474502	CRX.p2	AK143905|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	BC015262|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	NM_018731|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	U17282|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide
mm9_v1_chr10_+_41250456_41250646	0.473971	CRX.p2	AK217133|Cd164|53599|CD164 antigen	AK135616|Cd164|53599|CD164 antigen
mm9_v1_chr3_+_90318850_90318869	0.473626	CRX.p2	AK002755|S100a13|20196|S100 calcium binding protein A13	AK008895|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr3_-_135271247_135271409	0.473321	CRX.p2	AK159423|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S66656|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S89033|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr9_-_58160966_58161035	0.470805	CRX.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr2_-_6134008_6134046	0.469926	CRX.p2	BC054365|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	BC002214|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	AK004218|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	AK009166|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	NM_024208|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3
mm9_v1_chr18_-_80443840_80443840	0.468976	CRX.p2	AK141935|Hsbp1l1|66255|heat shock factor binding protein 1-like 1	NM_001136181|Hsbp1l1|66255|heat shock factor binding protein 1-like 1
mm9_v1_chr4_-_34634507_34634712	0.467844	CRX.p2	Z71268|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	BC012252|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	AK144170|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	NM_011895|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm9_v1_chrX_+_97821403_97821491	0.466901	CRX.p2	NM_008446|Kif4|16571|kinesin family member 4	AK084837|Kif4|16571|kinesin family member 4	AK135179|Kif4|16571|kinesin family member 4	BC050946|Kif4|16571|kinesin family member 4	BC054537|Kif4|16571|kinesin family member 4	AK171938|Kif4|16571|kinesin family member 4
mm9_v1_chr4_+_115273542_115273542	0.466811	CRX.p2	NM_001100181|Cyp4a32|100040843|cytochrome P450, family 4, subfamily a, polypeptide 32
mm9_v1_chr7_-_4465970_4466046	0.46506	CRX.p2	AJ131711|Tnnt1|21955|troponin T1, skeletal, slow
mm9_v1_chr11_-_105318037_105318048	0.465052	CRX.p2	AK132734|March10|632687|membrane-associated ring finger (C3HC4) 10	BC100474|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_001039242|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_172568|March10|632687|membrane-associated ring finger (C3HC4) 10
mm9_v1_chr17_-_45724536_45724608	0.464451	CRX.p2	AK198320|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK212529|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chrX_+_82495015_82495024	0.463838	CRX.p2	NM_028046|1600014K23Rik|71996|RIKEN cDNA 1600014K23 gene	BC049727|1600014K23Rik|71996|RIKEN cDNA 1600014K23 gene
mm9_v1_chr1_-_123229156_123229165	0.463627	CRX.p2	AK040703|Insig2|72999|insulin induced gene 2	NM_178082|Insig2|72999|insulin induced gene 2	AY156084|Insig2|72999|insulin induced gene 2
mm9_v1_chr4_-_73596693_73596749	0.463477	CRX.p2	BC115483|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	BC115484|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009124|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009097|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027104|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027981|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene
mm9_v1_chr11_+_96205082_96205082	0.462362	CRX.p2	NM_010458|Hoxb3|15410|homeobox B3	S35628|Hoxb3|15410|homeobox B3	X66177|Hoxb3|15410|homeobox B3
mm9_v1_chr3_+_57229331_57229351	0.452046	CRX.p2	NM_145539|Tm4sf4|229302|transmembrane 4 superfamily member 4
mm9_v1_chr1_-_173465423_173465424	0.448266	CRX.p2	AB016496|Itln1|16429|intelectin 1 (galactofuranose binding)	NM_010584|Itln1|16429|intelectin 1 (galactofuranose binding)	AK007447|Itln1|16429|intelectin 1 (galactofuranose binding)
mm9_v1_chr7_-_106494110_106494153	0.447068	CRX.p2	
mm9_v1_chr13_+_3564316_3564379	0.447052	CRX.p2	AF095728|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr16_-_10313963_10313988	0.447019	CRX.p2	AK161166|Emp2|13731|epithelial membrane protein 2	BC041670|Emp2|13731|epithelial membrane protein 2	AF346627|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr14_+_55082960_55083081	0.445241	CRX.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr19_+_4139744_4139808	0.444974	CRX.p2	AK044225|Gpr152|269053|G protein-coupled receptor 152	AK044366|Gpr152|269053|G protein-coupled receptor 152	BC099681|Gpr152|269053|G protein-coupled receptor 152	NM_206973|Gpr152|269053|G protein-coupled receptor 152
mm9_v1_chr1_-_186635045_186635085	0.443173	CRX.p2	AK011722|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1	AK004989|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr2_-_121282428_121282516	0.442903	CRX.p2	BC026459|Serinc4|574418|serine incorporator 4	BC083132|Serinc4|574418|serine incorporator 4	NM_001025371|Serinc4|574418|serine incorporator 4	AK044479|Serinc4|574418|serine incorporator 4
mm9_v1_chr7_+_134439888_134439975	0.442425	CRX.p2	AK155566|Itgal|16408|integrin alpha L	AK171389|Itgal|16408|integrin alpha L	M60778|Itgal|16408|integrin alpha L	BC145094|Itgal|16408|integrin alpha L	BC145095|Itgal|16408|integrin alpha L	BC145096|Itgal|16408|integrin alpha L	BC145802|Itgal|16408|integrin alpha L	AF065901|Itgal|16408|integrin alpha L	AF065902|Itgal|16408|integrin alpha L	AK152913|Itgal|16408|integrin alpha L
mm9_v1_chr4_-_82666973_82667005	0.441703	CRX.p2	BC138427|Frem1|329872|Fras1 related extracellular matrix protein 1	BC145274|Frem1|329872|Fras1 related extracellular matrix protein 1	AJ616838|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_177863|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chrX_+_20002809_20002842	0.439975	CRX.p2	BC065070|Phf16|382207|PHD finger protein 16
mm9_v1_chr11_+_96179580_96179580	0.439607	CRX.p2	BC095947|Hoxb4|15412|homeobox B4	NM_010459|Hoxb4|15412|homeobox B4
mm9_v1_chr1_-_172797866_172797977	0.439565	CRX.p2	AK020270|Atf6|226641|activating transcription factor 6	AK087000|Atf6|226641|activating transcription factor 6	AK036106|Atf6|226641|activating transcription factor 6	BC141028|Atf6|226641|activating transcription factor 6	AK036335|Atf6|226641|activating transcription factor 6	NM_001081304|Atf6|226641|activating transcription factor 6
mm9_v1_chr11_-_79344055_79344121	0.43854	CRX.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr4_-_141174547_141174547	0.437326	CRX.p2	AK085940|Tmem82|213989|transmembrane protein 82	NM_145987|Tmem82|213989|transmembrane protein 82
mm9_v1_chr9_-_107581922_107581964	0.435567	CRX.p2	BC022793|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	NM_008140|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	BC051412|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	BC058810|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1	AK149254|Gnat1|14685|guanine nucleotide binding protein, alpha transducing 1
mm9_v1_chr2_+_165818136_165818143	0.435407	CRX.p2	NM_008679|Ncoa3|17979|nuclear receptor coactivator 3
mm9_v1_chr3_-_64523523_64523523	0.43538	CRX.p2	NM_175674|Vmn2r7|319217|vomeronasal 2, receptor 7
mm9_v1_chr2_+_25143664_25143664	0.4336	CRX.p2	AK019803|Tmem210|78217|transmembrane protein 210	NM_030055|Tmem210|78217|transmembrane protein 210
mm9_v1_chr11_-_95574067_95574079	0.43104	CRX.p2	AK027957|1110035M17Rik|432396|RIKEN cDNA 1110035M17 gene
mm9_v1_chr13_-_119175893_119176078	0.430433	CRX.p2	AK013360|Mrps30|59054|mitochondrial ribosomal protein S30	BC029784|Mrps30|59054|mitochondrial ribosomal protein S30	AK011476|Mrps30|59054|mitochondrial ribosomal protein S30	AK151642|Mrps30|59054|mitochondrial ribosomal protein S30	NM_021556|Mrps30|59054|mitochondrial ribosomal protein S30
mm9_v1_chr12_-_4234293_4234293	0.430062	CRX.p2	AK029226|Cenpo|52504|centromere protein O	NM_134046|Cenpo|52504|centromere protein O
mm9_v1_chr2_+_162758440_162758589	0.425247	CRX.p2	AK051608|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr17_+_6806387_6806526	0.425076	CRX.p2	NM_001166627|Dynlt1f|100040531|dynein light chain Tctex-type 1F	AK168478|Dynlt1c|100040563|dynein light chain Tctex-type 1C	NM_001166630|Dynlt1c|100040563|dynein light chain Tctex-type 1C	M25825|Dynlt1b|21648|dynein light chain Tctex-type 1D	EF110999|Dynlt1c|100040563|dynein light chain Tctex-type 1C
mm9_v1_chr3_+_108167828_108167840	0.421637	CRX.p2	AK004148|Mybphl|68753|myosin binding protein H-like	NM_026831|Mybphl|68753|myosin binding protein H-like	BC132636|Mybphl|68753|myosin binding protein H-like	BC132638|Mybphl|68753|myosin binding protein H-like	BC089625|Mybphl|68753|myosin binding protein H-like
mm9_v1_chr7_+_138686380_138686476	0.419855	CRX.p2	BC139482|Hmx3|15373|H6 homeobox 3	BC139483|Hmx3|15373|H6 homeobox 3	NM_008257|Hmx3|15373|H6 homeobox 3
mm9_v1_chr1_-_90102270_90102322	0.417858	CRX.p2	AK005690|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	AK005688|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	BC048490|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_008299|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3	U95607|Dnajb3|15504|DnaJ (Hsp40) homolog, subfamily B, member 3
mm9_v1_chr6_+_90500776_90500841	0.417331	CRX.p2	BC024055|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC028817|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC022112|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC030730|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	NM_027406|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1
mm9_v1_chr9_+_74696269_74696406	0.416654	CRX.p2	AK050237|Onecut1|15379|one cut domain, family member 1	AK051235|Onecut1|15379|one cut domain, family member 1	BC023444|Onecut1|15379|one cut domain, family member 1
mm9_v1_chr9_-_103104394_103104479	0.416449	CRX.p2	AK030437|Srprb|20818|signal recognition particle receptor, B subunit	NM_009275|Srprb|20818|signal recognition particle receptor, B subunit	AK075583|Srprb|20818|signal recognition particle receptor, B subunit	AK007859|Srprb|20818|signal recognition particle receptor, B subunit	AK167039|Srprb|20818|signal recognition particle receptor, B subunit	U17343|Srprb|20818|signal recognition particle receptor, B subunit	BC003798|Srprb|20818|signal recognition particle receptor, B subunit	AK004854|Srprb|20818|signal recognition particle receptor, B subunit	AK008383|Srprb|20818|signal recognition particle receptor, B subunit	AK015469|Srprb|20818|signal recognition particle receptor, B subunit	AK160600|Srprb|20818|signal recognition particle receptor, B subunit
mm9_v1_chr6_+_114593104_114593174	0.41517	CRX.p2	AK007484|Atg7|74244|autophagy-related 7 (yeast)	NM_028835|Atg7|74244|autophagy-related 7 (yeast)	AK166023|Atg7|74244|autophagy-related 7 (yeast)	AK170769|Atg7|74244|autophagy-related 7 (yeast)	AK146992|Atg7|74244|autophagy-related 7 (yeast)	AK161133|Atg7|74244|autophagy-related 7 (yeast)	AK165653|Atg7|74244|autophagy-related 7 (yeast)	AK166074|Atg7|74244|autophagy-related 7 (yeast)	AK171968|Atg7|74244|autophagy-related 7 (yeast)	AK172272|Atg7|74244|autophagy-related 7 (yeast)	BC058597|Atg7|74244|autophagy-related 7 (yeast)
mm9_v1_chr15_-_77426500_77426554	0.413848	CRX.p2	BC147348|Apol10b|328561|apolipoprotein L 10b	BC147349|Apol10b|328561|apolipoprotein L 10b	AK033678|Apol10b|328561|apolipoprotein L 10b	AK144113|Apol10b|328561|apolipoprotein L 10b	NM_177820|Apol10b|328561|apolipoprotein L 10b
mm9_v1_chr19_+_40164158_40164224	0.413779	CRX.p2	NM_001167875|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	NM_001167877|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	NM_134144|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	BC051050|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	BC011222|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	AY206873|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	AK149466|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50
mm9_v1_chr2_-_172284055_172284095	0.412633	CRX.p2	BC139073|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	BC139076|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	AK039414|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	NM_001039560|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7
mm9_v1_chr3_+_129883794_129883901	0.411646	CRX.p2	NM_029838|Col25a1|77018|collagen, type XXV, alpha 1	NM_198711|Col25a1|77018|collagen, type XXV, alpha 1	AK035562|Col25a1|77018|collagen, type XXV, alpha 1	AK085241|Col25a1|77018|collagen, type XXV, alpha 1	BC024329|Col25a1|77018|collagen, type XXV, alpha 1	BC138051|Col25a1|77018|collagen, type XXV, alpha 1
mm9_v1_chr6_+_83187368_83187368	0.410726	CRX.p2	NM_001166067|Slc4a5|232156|solute carrier family 4, sodium bicarbonate cotransporter, member 5
mm9_v1_chr1_-_173465366_173465415	0.409336	CRX.p2	BC150795|Itln1|16429|intelectin 1 (galactofuranose binding)	AY157363|Itln1|16429|intelectin 1 (galactofuranose binding)	AY157364|Itln1|16429|intelectin 1 (galactofuranose binding)	AY619693|Itln1|16429|intelectin 1 (galactofuranose binding)
mm9_v1_chrX_-_99384644_99384667	0.408454	CRX.p2	BC089348|Rps4x|20102|ribosomal protein S4, X-linked	BC089349|Rps4x|20102|ribosomal protein S4, X-linked	AK153211|Rps4x|20102|ribosomal protein S4, X-linked	AK014210|Rps4x|20102|ribosomal protein S4, X-linked	AK002445|Rps4x|20102|ribosomal protein S4, X-linked	AK010676|Rps4x|20102|ribosomal protein S4, X-linked	AK010921|Rps4x|20102|ribosomal protein S4, X-linked	AK012429|Rps4x|20102|ribosomal protein S4, X-linked	AK088410|Rps4x|20102|ribosomal protein S4, X-linked	AK135369|Rps4x|20102|ribosomal protein S4, X-linked	AK010624|Rps4x|20102|ribosomal protein S4, X-linked
mm9_v1_chr13_+_31650033_31650038	0.408394	CRX.p2	AK147202|Foxq1|15220|forkhead box Q1	NM_008239|Foxq1|15220|forkhead box Q1
mm9_v1_chr11_+_95720178_95720317	0.407112	CRX.p2	AK014714|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene	AK133925|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene
mm9_v1_chr13_-_53568111_53568148	0.405917	CRX.p2	AK131974|Msx2|17702|homeobox, msh-like 2	BC141132|Msx2|17702|homeobox, msh-like 2	AK133846|Msx2|17702|homeobox, msh-like 2	NM_013601|Msx2|17702|homeobox, msh-like 2
mm9_v1_chr15_+_102126686_102126729	0.404987	CRX.p2	BC082603|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)	NM_001014976|Espl1|105988|extra spindle poles-like 1 (S. cerevisiae)
mm9_v1_chr17_-_29079205_29079208	0.404642	CRX.p2	BC100437|Pxt1|69307|peroxisomal, testis specific 1	AF486826|Pxt1|69307|peroxisomal, testis specific 1	NM_153390|Pxt1|69307|peroxisomal, testis specific 1	AK005593|Pxt1|69307|peroxisomal, testis specific 1
mm9_v1_chr1_-_75305185_75305253	0.403651	CRX.p2	
mm9_v1_chr19_+_46130978_46131205	0.403153	CRX.p2	NM_001081214|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK147947|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK044522|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK122322|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	BC066048|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK180476|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm9_v1_chr7_-_23504728_23504728	0.400884	CRX.p2	AK139578|Gm5156|381936|predicted gene 5156	NM_001037248|Gm5156|381936|predicted gene 5156
mm9_v1_chr7_-_21515642_21515642	0.400884	CRX.p2	AK139578|Gm5156|381936|predicted gene 5156	NM_001037248|Gm5156|381936|predicted gene 5156
mm9_v1_chr7_-_21315959_21315959	0.400884	CRX.p2	AK139578|Gm5156|381936|predicted gene 5156	NM_001037248|Gm5156|381936|predicted gene 5156
mm9_v1_chr17_-_36106668_36106727	0.400802	CRX.p2	BC046965|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	BC032250|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	BC063094|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	NM_013854|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1	AK077741|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1
mm9_v1_chr14_-_70607443_70607553	0.400365	CRX.p2	AF064806|Sorbs3|20410|sorbin and SH3 domain containing 3	NM_011366|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr19_-_4498559_4498610	0.398571	CRX.p2	AK008072|2010003K11Rik|69861|RIKEN cDNA 2010003K11 gene	BC021951|2010003K11Rik|69861|RIKEN cDNA 2010003K11 gene	NM_027237|2010003K11Rik|69861|RIKEN cDNA 2010003K11 gene
mm9_v1_chr17_-_34253887_34254086	0.398487	CRX.p2	AK179882|Brd2|14312|bromodomain containing 2	AK205877|Brd2|14312|bromodomain containing 2	AK218127|Brd2|14312|bromodomain containing 2	AB212273|Brd2|14312|bromodomain containing 2	AB010248|Brd2|14312|bromodomain containing 2
mm9_v1_chr2_-_30657226_30657261	0.39732	CRX.p2	BC023044|1700001O22Rik|73598|RIKEN cDNA 1700001O22 gene	NM_198000|1700001O22Rik|73598|RIKEN cDNA 1700001O22 gene
mm9_v1_chr11_-_69050508_69050523	0.395727	CRX.p2	BC057954|Gucy2e|14919|guanylate cyclase 2e	AK044282|Gucy2e|14919|guanylate cyclase 2e	NM_008192|Gucy2e|14919|guanylate cyclase 2e
mm9_v1_chr17_+_80014239_80014239	0.392342	CRX.p2	AK034617|Fam82a1|381110|family with sequence similarity 82, member A1	NM_201361|Fam82a1|381110|family with sequence similarity 82, member A1
mm9_v1_chr11_-_99146520_99146575	0.3916	CRX.p2	GU046702|Krt24|75706|keratin 24	BC129847|Krt24|75706|keratin 24	BC129848|Krt24|75706|keratin 24	NM_029393|Krt24|75706|keratin 24	AK010165|Krt24|75706|keratin 24
mm9_v1_chr11_-_50244605_50244617	0.389803	CRX.p2	AK046633|Rufy1|216724|RUN and FYVE domain containing 1	NM_172557|Rufy1|216724|RUN and FYVE domain containing 1	AK051178|Rufy1|216724|RUN and FYVE domain containing 1
mm9_v1_chr7_+_13983480_13983656	0.384394	CRX.p2	BC018253|Cabp5|29865|calcium binding protein 5	AK044544|Cabp5|29865|calcium binding protein 5	NM_013877|Cabp5|29865|calcium binding protein 5	AF169161|Cabp5|29865|calcium binding protein 5	AK087416|Cabp5|29865|calcium binding protein 5	AB079605|Cabp5|29865|calcium binding protein 5
mm9_v1_chr6_+_90500848_90500852	0.383842	CRX.p2	BC030723|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1
mm9_v1_chrX_+_132758579_132758588	0.383091	CRX.p2	NM_001127169|Tceal7|100040972|transcription elongation factor A (SII)-like 7	AK003800|Tceal7|100040972|transcription elongation factor A (SII)-like 7
mm9_v1_chr6_+_49317737_49317832	0.382987	CRX.p2	NM_001172216|D330028D13Rik|231946|RIKEN cDNA D330028D13 gene	NM_172727|D330028D13Rik|231946|RIKEN cDNA D330028D13 gene	BC055818|D330028D13Rik|231946|RIKEN cDNA D330028D13 gene	AK052323|D330028D13Rik|231946|RIKEN cDNA D330028D13 gene	AK140239|D330028D13Rik|231946|RIKEN cDNA D330028D13 gene
mm9_v1_chr13_-_64190493_64190508	0.381386	CRX.p2	U66827|Hsd17b3|15487|hydroxysteroid (17-beta) dehydrogenase 3	NM_008291|Hsd17b3|15487|hydroxysteroid (17-beta) dehydrogenase 3
mm9_v1_chr8_+_112017926_112017974	0.376779	CRX.p2	AB029919|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	NM_019938|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	BC138245|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1	BC138246|Pmfbp1|56523|polyamine modulated factor 1 binding protein 1
mm9_v1_chr7_+_54116624_54116645	0.376497	CRX.p2	X04752|Ldhc|16833|lactate dehydrogenase C	BC049602|Ldhc|16833|lactate dehydrogenase C	AK007058|Ldhc|16833|lactate dehydrogenase C	NM_013580|Ldhc|16833|lactate dehydrogenase C	AK161399|Ldhc|16833|lactate dehydrogenase C
mm9_v1_chr14_+_13116681_13116761	0.375394	CRX.p2	NM_146051|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	NM_178141|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK076182|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC094456|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK089971|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC027421|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chr5_-_89088843_89089007	0.37518	CRX.p2	AK208573|Grsf1|231413|G-rich RNA sequence binding factor 1	AK211991|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr7_+_73205221_73205221	0.373992	CRX.p2	NM_021336|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr7_-_4116300_4116329	0.372939	CRX.p2	AK008154|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	NM_021454|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	BC103774|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5
mm9_v1_chr10_-_20444654_20444883	0.372092	CRX.p2	AF190639|Pde7b|29863|phosphodiesterase 7B	BC130267|Pde7b|29863|phosphodiesterase 7B	AK020137|Pde7b|29863|phosphodiesterase 7B	AK040876|Pde7b|29863|phosphodiesterase 7B	NM_013875|Pde7b|29863|phosphodiesterase 7B	AK035385|Pde7b|29863|phosphodiesterase 7B
mm9_v1_chr2_+_22924561_22924686	0.371921	CRX.p2	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr8_-_3625510_3625544	0.370897	CRX.p2	BC014694|Pcp2|18545|Purkinje cell protein 2 (L7)	BC028982|Pcp2|18545|Purkinje cell protein 2 (L7)	BC024853|Pcp2|18545|Purkinje cell protein 2 (L7)	EU164759|Pcp2|18545|Purkinje cell protein 2 (L7)	NM_001129803|Pcp2|18545|Purkinje cell protein 2 (L7)
mm9_v1_chr11_-_40562196_40562300	0.370812	CRX.p2	
mm9_v1_chr5_+_110660011_110660183	0.37012	CRX.p2	AK132187|Ankle2|71782|ankyrin repeat and LEM domain containing 2	BC065071|Ankle2|71782|ankyrin repeat and LEM domain containing 2	NM_027922|Ankle2|71782|ankyrin repeat and LEM domain containing 2	AK043925|Ankle2|71782|ankyrin repeat and LEM domain containing 2
mm9_v1_chr19_+_55255374_55255445	0.367505	CRX.p2	NM_009348|Tectb|21684|tectorin beta	X99806|Tectb|21684|tectorin beta	BC138888|Tectb|21684|tectorin beta	BC138889|Tectb|21684|tectorin beta
mm9_v1_chrX_+_130442964_130443234	0.365598	CRX.p2	NM_001083895|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	NM_026838|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	AK136935|Srpx2|68792|sushi-repeat-containing protein, X-linked 2	BC028307|Srpx2|68792|sushi-repeat-containing protein, X-linked 2
mm9_v1_chr4_+_107845516_107845542	0.365333	CRX.p2	BC025454|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2
mm9_v1_chr6_+_51382668_51382761	0.364669	CRX.p2	AB013852|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	NM_010903|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK133935|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK136980|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK137881|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK017278|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK020550|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK153612|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	BC005416|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3
mm9_v1_chrX_-_25478166_25478166	0.364484	CRX.p2	BC099542|Gm5168|382275|predicted gene 5168	NM_001025607|Gm5168|382275|predicted gene 5168
mm9_v1_chr2_+_152398479_152398479	0.36294	CRX.p2	AK076875|Defb21|403172|defensin beta 21	DQ012032|Defb21|403172|defensin beta 21	NM_207276|Defb21|403172|defensin beta 21
mm9_v1_chr9_+_13632152_13632249	0.36136	CRX.p2	AK145026|Fam76b|72826|family with sequence similarity 76, member B	BC043120|Fam76b|72826|family with sequence similarity 76, member B	NM_176836|Fam76b|72826|family with sequence similarity 76, member B	AK052430|Fam76b|72826|family with sequence similarity 76, member B	BC050870|Fam76b|72826|family with sequence similarity 76, member B
mm9_v1_chr9_-_20954341_20954417	0.360189	CRX.p2	AK013255|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	NM_016742|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	AK168651|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	BC060079|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	AK010494|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	AK145671|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)	U43076|Cdc37|12539|cell division cycle 37 homolog (S. cerevisiae)
mm9_v1_chr1_+_135247242_135247279	0.359621	CRX.p2	J00621|Ren2|19702|renin 2 tandem duplication of Ren1	AK052685|Ren1|19701|renin 1 structural	AK085309|Ren1|19701|renin 1 structural	NM_031192|Ren1|19701|renin 1 structural	BC061053|Ren1|19701|renin 1 structural	BC011157|Ren2|19702|renin 2 tandem duplication of Ren1	BC011473|Ren2|19702|renin 2 tandem duplication of Ren1	X16642|Ren1|19701|renin 1 structural	BC024331|Ren1|19701|renin 1 structural
mm9_v1_chr1_-_172105009_172105087	0.358084	CRX.p2	BC016406|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK036243|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK147139|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK081690|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK049519|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	NM_133806|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK047566|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1
mm9_v1_chr12_+_52449216_52449372	0.357588	CRX.p2	NM_001015099|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167963|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167964|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK033513|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK129332|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	BC086455|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK084256|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK031333|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase
mm9_v1_chr13_+_33119282_33119422	0.356823	CRX.p2	AK005491|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	NM_011452|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	U96705|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK167563|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK171850|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	BC064768|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b
mm9_v1_chr2_-_26927606_26927684	0.356805	CRX.p2	BC062145|Tmem8c|66139|transmembrane protein 8C	AK004477|Tmem8c|66139|transmembrane protein 8C	AK003298|Tmem8c|66139|transmembrane protein 8C	NM_025376|Tmem8c|66139|transmembrane protein 8C
mm9_v1_chr5_-_124875921_124875965	0.356361	CRX.p2	NM_001081203|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK077133|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK165852|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)
mm9_v1_chr2_+_136717938_136718024	0.355585	CRX.p2	AK050487|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	AK008687|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_028834|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	BC071202|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr17_+_23797470_23797489	0.354835	CRX.p2	AK133729|Ccdc64b|212733|coiled-coil domain containing 64B	AK036793|Ccdc64b|212733|coiled-coil domain containing 64B	BC038613|Ccdc64b|212733|coiled-coil domain containing 64B	NM_153784|Ccdc64b|212733|coiled-coil domain containing 64B
mm9_v1_chr3_-_96618414_96618443	0.349735	CRX.p2	AF060982|Cd160|54215|CD160 antigen	BC021596|Cd160|54215|CD160 antigen	AK042093|Cd160|54215|CD160 antigen	NM_018767|Cd160|54215|CD160 antigen
mm9_v1_chr4_-_117438214_117438270	0.348362	CRX.p2	BC064748|Klf17|75753|Kruppel-like factor 17	AF508984|Klf17|75753|Kruppel-like factor 17	AK018361|Klf17|75753|Kruppel-like factor 17	AK139827|Klf17|75753|Kruppel-like factor 17	NM_029416|Klf17|75753|Kruppel-like factor 17
mm9_v1_chr2_+_124978315_124978357	0.345168	CRX.p2	AK052750|Slc12a1|20495|solute carrier family 12, member 1	AK085455|Slc12a1|20495|solute carrier family 12, member 1	AK128928|Slc12a1|20495|solute carrier family 12, member 1	NM_001079690|Slc12a1|20495|solute carrier family 12, member 1	NM_183354|Slc12a1|20495|solute carrier family 12, member 1	U20973|Slc12a1|20495|solute carrier family 12, member 1	U20974|Slc12a1|20495|solute carrier family 12, member 1	U20975|Slc12a1|20495|solute carrier family 12, member 1	BC016888|Slc12a1|20495|solute carrier family 12, member 1
mm9_v1_chr7_-_50788445_50788507	0.343891	CRX.p2	AK089205|Cd33|12489|CD33 antigen	AK155745|Cd33|12489|CD33 antigen	S71345|Cd33|12489|CD33 antigen	S71403|Cd33|12489|CD33 antigen	AK170937|Cd33|12489|CD33 antigen
mm9_v1_chr11_-_102786433_102786439	0.341944	CRX.p2	NM_197959|Kif18b|70218|kinesin family member 18B
mm9_v1_chr7_+_125884231_125884271	0.340241	CRX.p2	AK136140|9030624J02Rik|71517|RIKEN cDNA 9030624J02 gene	AK018573|9030624J02Rik|71517|RIKEN cDNA 9030624J02 gene	AK050302|9030624J02Rik|71517|RIKEN cDNA 9030624J02 gene	AK011615|9030624J02Rik|71517|RIKEN cDNA 9030624J02 gene	AK135249|9030624J02Rik|71517|RIKEN cDNA 9030624J02 gene	BC054720|9030624J02Rik|71517|RIKEN cDNA 9030624J02 gene
mm9_v1_chr2_-_34916915_34916960	0.33959	CRX.p2	M35525|Hc|15139|hemolytic complement	M35526|Hc|15139|hemolytic complement	AK080166|Hc|15139|hemolytic complement	NM_010406|Hc|15139|hemolytic complement
mm9_v1_chr4_+_151424681_151424743	0.338574	CRX.p2	AK179132|Nol9|74035|nucleolar protein 9
mm9_v1_chr12_+_72149332_72149349	0.337384	CRX.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr18_+_80403581_80403591	0.337002	CRX.p2	BC025053|Txnl4a|27366|thioredoxin-like 4A	NM_178604|Txnl4a|27366|thioredoxin-like 4A	AK171121|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr5_+_102910409_102910555	0.335595	CRX.p2	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr7_+_50927384_50927400	0.335526	CRX.p2	AK155284|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	AK160967|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	BC005752|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	NM_145582|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)
mm9_v1_chr5_-_147775315_147775391	0.334434	CRX.p2	BC115684|Mtif3|76366|mitochondrial translational initiation factor 3	BC115685|Mtif3|76366|mitochondrial translational initiation factor 3	BC052439|Mtif3|76366|mitochondrial translational initiation factor 3	AK012733|Mtif3|76366|mitochondrial translational initiation factor 3	AK147090|Mtif3|76366|mitochondrial translational initiation factor 3	NM_029581|Mtif3|76366|mitochondrial translational initiation factor 3	AK088146|Mtif3|76366|mitochondrial translational initiation factor 3
mm9_v1_chr7_-_111291762_111291785	0.334247	CRX.p2	BC100419|Ubqln3|244178|ubiquilin 3	AK077072|Ubqln3|244178|ubiquilin 3	NM_198623|Ubqln3|244178|ubiquilin 3
mm9_v1_chr3_+_102800607_102800650	0.333991	CRX.p2	
mm9_v1_chr7_-_4116102_4116147	0.332682	CRX.p2	AF102773|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	AF164119|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5	BC006758|Cdc42ep5|58804|CDC42 effector protein (Rho GTPase binding) 5
mm9_v1_chr4_-_41261905_41261949	0.33254	CRX.p2	NM_026893|Dcaf12|68970|DDB1 and CUL4 associated factor 12
mm9_v1_chr6_-_43259527_43259552	0.331182	CRX.p2	AB221582|Nobox|18291|NOBOX oogenesis homeobox	BC125280|Nobox|18291|NOBOX oogenesis homeobox	BC125282|Nobox|18291|NOBOX oogenesis homeobox	AY061761|Nobox|18291|NOBOX oogenesis homeobox	NM_130869|Nobox|18291|NOBOX oogenesis homeobox
mm9_v1_chr11_-_60590750_60590788	0.330206	CRX.p2	AK164443|Top3a|21975|topoisomerase (DNA) III alpha	AK037640|Top3a|21975|topoisomerase (DNA) III alpha	AK170291|Top3a|21975|topoisomerase (DNA) III alpha	AK171286|Top3a|21975|topoisomerase (DNA) III alpha
mm9_v1_chr2_+_28915770_28915796	0.328303	CRX.p2	AK053589|Ttf1|22130|transcription termination factor, RNA polymerase I	AK163606|Ttf1|22130|transcription termination factor, RNA polymerase I	NM_009442|Ttf1|22130|transcription termination factor, RNA polymerase I	AK140081|Ttf1|22130|transcription termination factor, RNA polymerase I	X83974|Ttf1|22130|transcription termination factor, RNA polymerase I
mm9_v1_chr9_+_108888207_108888218	0.326478	CRX.p2	NM_145077|Ucn2|171530|urocortin 2	AF331517|Ucn2|171530|urocortin 2
mm9_v1_chr13_-_97968221_97968343	0.326199	CRX.p2	Y00964|Hexb|15212|hexosaminidase B	AK151149|Hexb|15212|hexosaminidase B	AK159134|Hexb|15212|hexosaminidase B	AK160560|Hexb|15212|hexosaminidase B	AK159178|Hexb|15212|hexosaminidase B	U07633|Hexb|15212|hexosaminidase B	AK168825|Hexb|15212|hexosaminidase B	NM_010422|Hexb|15212|hexosaminidase B
mm9_v1_chr4_-_120597563_120597650	0.325908	CRX.p2	BC023360|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	AK014134|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_001160043|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_028457|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)
mm9_v1_chrX_+_109424956_109425024	0.325784	CRX.p2	AK028953|Apool|68117|apolipoprotein O-like	AK079141|Apool|68117|apolipoprotein O-like	AK012398|Apool|68117|apolipoprotein O-like	AK012804|Apool|68117|apolipoprotein O-like	AK020156|Apool|68117|apolipoprotein O-like	AK088869|Apool|68117|apolipoprotein O-like	AK086522|Apool|68117|apolipoprotein O-like	BC024334|Apool|68117|apolipoprotein O-like	NM_026565|Apool|68117|apolipoprotein O-like
mm9_v1_chr6_+_122576437_122576540	0.325455	CRX.p2	AK135769|Dppa3|73708|developmental pluripotency-associated 3	AK136263|Dppa3|73708|developmental pluripotency-associated 3	AY134859|Dppa3|73708|developmental pluripotency-associated 3	AF490347|Dppa3|73708|developmental pluripotency-associated 3	AY082485|Dppa3|73708|developmental pluripotency-associated 3	NM_139218|Dppa3|73708|developmental pluripotency-associated 3	BC099433|Dppa3|73708|developmental pluripotency-associated 3	BC100331|Dppa3|73708|developmental pluripotency-associated 3	BC107340|Dppa3|73708|developmental pluripotency-associated 3	BC107341|Dppa3|73708|developmental pluripotency-associated 3	AK010723|Dppa3|73708|developmental pluripotency-associated 3	AB072734|Dppa3|73708|developmental pluripotency-associated 3
mm9_v1_chr5_+_76613120_76613173	0.324866	CRX.p2	BC141081|Tmem165|21982|transmembrane protein 165
mm9_v1_chr3_-_94240497_94240537	0.324708	CRX.p2	AB045835|Oaz3|53814|ornithine decarboxylase antizyme 3	BC119339|Oaz3|53814|ornithine decarboxylase antizyme 3	BC119341|Oaz3|53814|ornithine decarboxylase antizyme 3	AK006116|Oaz3|53814|ornithine decarboxylase antizyme 3	AK006634|Oaz3|53814|ornithine decarboxylase antizyme 3	AK076942|Oaz3|53814|ornithine decarboxylase antizyme 3	AF175297|Oaz3|53814|ornithine decarboxylase antizyme 3	NM_016901|Oaz3|53814|ornithine decarboxylase antizyme 3
mm9_v1_chr2_-_62411970_62412077	0.323933	CRX.p2	BC019190|Fap|14089|fibroblast activation protein	AK051959|Fap|14089|fibroblast activation protein	NM_007986|Fap|14089|fibroblast activation protein	Y10007|Fap|14089|fibroblast activation protein
mm9_v1_chr14_+_67254087_67254180	0.32346	CRX.p2	AK085653|Adra1a|11549|adrenergic receptor, alpha 1a	AK079597|Adra1a|11549|adrenergic receptor, alpha 1a	NM_013461|Adra1a|11549|adrenergic receptor, alpha 1a	AK050183|Adra1a|11549|adrenergic receptor, alpha 1a	AK042759|Adra1a|11549|adrenergic receptor, alpha 1a	AK138919|Adra1a|11549|adrenergic receptor, alpha 1a
mm9_v1_chr2_+_91512033_91512158	0.32266	CRX.p2	AK083702|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr11_+_70318775_70318815	0.321142	CRX.p2	NM_029360|Tm4sf5|75604|transmembrane 4 superfamily member 5	AK008064|Tm4sf5|75604|transmembrane 4 superfamily member 5	BC010782|Tm4sf5|75604|transmembrane 4 superfamily member 5
mm9_v1_chr10_+_77060408_77060810	0.319399	CRX.p2	AK177209|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK190939|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK200019|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK204685|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK217718|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK190184|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK216585|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK191037|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK192116|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK202715|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK209759|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK211153|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK216317|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein
mm9_v1_chr7_-_26531381_26531435	0.319294	CRX.p2	BC027844|Hnrnpul1|232989|heterogeneous nuclear ribonucleoprotein U-like 1	AK203240|Hnrnpul1|232989|heterogeneous nuclear ribonucleoprotein U-like 1
mm9_v1_chr13_-_35118959_35118964	0.316424	CRX.p2	
mm9_v1_chr2_+_162813216_162813237	0.316045	CRX.p2	NM_013731|Sgk2|27219|serum/glucocorticoid regulated kinase 2	AK050009|Sgk2|27219|serum/glucocorticoid regulated kinase 2
mm9_v1_chr18_+_80403577_80403580	0.314347	CRX.p2	AK004039|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr2_-_38640034_38640034	0.312427	CRX.p2	NM_001159548|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_001159549|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr11_+_67090625_67090855	0.311894	CRX.p2	NM_177369|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021877|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021876|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	BC150737|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK029328|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK081482|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK087387|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AY963802|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021878|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal
mm9_v1_chr11_-_60590796_60590866	0.311112	CRX.p2	AB006074|Top3a|21975|topoisomerase (DNA) III alpha	NM_009410|Top3a|21975|topoisomerase (DNA) III alpha
mm9_v1_chr11_-_86900220_86900252	0.30979	CRX.p2	AK031106|1200011M11Rik|74133|RIKEN cDNA 1200011M11 gene
mm9_v1_chr18_-_60783946_60784004	0.309034	CRX.p2	AK154958|Synpo|104027|synaptopodin	NM_177340|Synpo|104027|synaptopodin
mm9_v1_chr15_+_76709688_76709760	0.306845	CRX.p2	BC011501|Zfp7|223669|zinc finger protein 7	NM_145916|Zfp7|223669|zinc finger protein 7	AK144887|Zfp7|223669|zinc finger protein 7	AK038299|Zfp7|223669|zinc finger protein 7	AK143414|Zfp7|223669|zinc finger protein 7	AK168948|Zfp7|223669|zinc finger protein 7	BC062103|Zfp7|223669|zinc finger protein 7
mm9_v1_chr6_-_129572590_129572688	0.304906	CRX.p2	AY860972|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	CT010384|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AF039026|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	BC057147|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK040436|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_033078|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr2_-_4984983_4985031	0.304221	CRX.p2	BC061185|Optn|71648|optineurin	NM_181848|Optn|71648|optineurin
mm9_v1_chr1_-_155396839_155396845	0.303966	CRX.p2	BC022734|Npl|74091|N-acetylneuraminate pyruvate lyase	AK154216|F630010C12Rik|100038670|RIKEN cDNA F630010C12 gene	AK002734|Npl|74091|N-acetylneuraminate pyruvate lyase	NM_028749|Npl|74091|N-acetylneuraminate pyruvate lyase	AK088859|Npl|74091|N-acetylneuraminate pyruvate lyase
mm9_v1_chr17_+_56812647_56812679	0.303031	CRX.p2	NM_027933|Ranbp3|71810|RAN binding protein 3
mm9_v1_chr19_-_6543005_6543069	0.302809	CRX.p2	BC035927|Slc22a12|20521|solute carrier family 22 (organic anion/cation transporter), member 12	NM_009203|Slc22a12|20521|solute carrier family 22 (organic anion/cation transporter), member 12
mm9_v1_chr15_+_3220766_3220979	0.302012	CRX.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr18_-_34666454_34666491	0.300684	CRX.p2	AK029766|Fam13b|225358|family with sequence similarity 13, member B	BC031465|Fam13b|225358|family with sequence similarity 13, member B	NM_146084|Fam13b|225358|family with sequence similarity 13, member B	AK084711|Fam13b|225358|family with sequence similarity 13, member B
mm9_v1_chr2_+_28368603_28368686	0.300608	CRX.p2	NM_001145834|Ralgds|19730|ral guanine nucleotide dissociation stimulator	NM_009058|Ralgds|19730|ral guanine nucleotide dissociation stimulator
mm9_v1_chr1_+_93146860_93146963	0.299401	CRX.p2	AK010957|Ube2f|67921|ubiquitin-conjugating enzyme E2F (putative)	AK153481|Ube2f|67921|ubiquitin-conjugating enzyme E2F (putative)	NM_026454|Ube2f|67921|ubiquitin-conjugating enzyme E2F (putative)	AK007960|Ube2f|67921|ubiquitin-conjugating enzyme E2F (putative)	AK030594|Ube2f|67921|ubiquitin-conjugating enzyme E2F (putative)	AK007549|Ube2f|67921|ubiquitin-conjugating enzyme E2F (putative)	AK007937|Ube2f|67921|ubiquitin-conjugating enzyme E2F (putative)
mm9_v1_chr12_+_17697604_17697620	0.299095	CRX.p2	NM_016677|Hpcal1|53602|hippocalcin-like 1
mm9_v1_chr6_+_90500855_90500862	0.296607	CRX.p2	BC030727|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC030722|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1	BC025939|Aldh1l1|107747|aldehyde dehydrogenase 1 family, member L1
mm9_v1_chr2_+_132672362_132672442	0.296065	CRX.p2	AK002408|Crls1|66586|cardiolipin synthase 1	AK018180|Crls1|66586|cardiolipin synthase 1	NM_001024385|Crls1|66586|cardiolipin synthase 1	BC048702|Crls1|66586|cardiolipin synthase 1	AK017718|Crls1|66586|cardiolipin synthase 1	BC086619|Crls1|66586|cardiolipin synthase 1
mm9_v1_chr2_-_155899631_155899762	0.295755	CRX.p2	AK075784|Cpne1|266692|copine I
mm9_v1_chr12_-_114665550_114665585	0.293867	CRX.p2	AK134155|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr17_+_6600795_6600934	0.29231	CRX.p2	NM_001166627|Dynlt1f|100040531|dynein light chain Tctex-type 1F	AK168478|Dynlt1c|100040563|dynein light chain Tctex-type 1C	NM_001166630|Dynlt1c|100040563|dynein light chain Tctex-type 1C	AK005569|Dynlt1f|100040531|dynein light chain Tctex-type 1F	M25825|Dynlt1b|21648|dynein light chain Tctex-type 1D	EF110999|Dynlt1c|100040563|dynein light chain Tctex-type 1C
mm9_v1_chr2_-_120862405_120862570	0.291642	CRX.p2	AK158219|Epb4.2|13828|erythrocyte protein band 4.2	AK158370|Epb4.2|13828|erythrocyte protein band 4.2	AK165288|Epb4.2|13828|erythrocyte protein band 4.2	AK172410|Epb4.2|13828|erythrocyte protein band 4.2	AK158247|Epb4.2|13828|erythrocyte protein band 4.2	BC053739|Epb4.2|13828|erythrocyte protein band 4.2	AK143841|Epb4.2|13828|erythrocyte protein band 4.2	L35933|Epb4.2|13828|erythrocyte protein band 4.2	BC066194|Epb4.2|13828|erythrocyte protein band 4.2	BC066806|Epb4.2|13828|erythrocyte protein band 4.2	NM_013513|Epb4.2|13828|erythrocyte protein band 4.2	U04055|Epb4.2|13828|erythrocyte protein band 4.2	AK133896|Epb4.2|13828|erythrocyte protein band 4.2	AK137484|Epb4.2|13828|erythrocyte protein band 4.2
mm9_v1_chr19_+_39361574_39361600	0.290808	CRX.p2	NM_007815|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	BC019908|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	D17674|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29
mm9_v1_chr18_+_85020742_85020795	0.290595	CRX.p2	AK132102|Cyb5|109672|cytochrome b-5
mm9_v1_chr7_-_112959591_112959616	0.288093	CRX.p2	NM_025301|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr11_-_22882120_22882303	0.287771	CRX.p2	AK147766|Commd1|17846|COMM domain containing 1	BC030052|Commd1|17846|COMM domain containing 1	BC038641|Commd1|17846|COMM domain containing 1	D85430|Commd1|17846|COMM domain containing 1	BC051210|Commd1|17846|COMM domain containing 1	AK082909|Commd1|17846|COMM domain containing 1	AK133507|Commd1|17846|COMM domain containing 1	BC132083|Commd1|17846|COMM domain containing 1	BC132085|Commd1|17846|COMM domain containing 1	AB104816|Commd1|17846|COMM domain containing 1	NM_144514|Commd1|17846|COMM domain containing 1
mm9_v1_chr5_+_90889937_90889973	0.28766	CRX.p2	BC024643|Alb|11657|albumin	BC049971|Alb|11657|albumin	AJ457860|Alb|11657|albumin
mm9_v1_chr13_+_23962141_23962200	0.286985	CRX.p2	NM_001170638|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	NM_009198|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AF361761|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AK164712|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	X77241|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	BC013445|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1
mm9_v1_chr4_+_100449274_100449299	0.286635	CRX.p2	AK080923|Cachd1|320508|cache domain containing 1	BC058676|Cachd1|320508|cache domain containing 1	NM_198037|Cachd1|320508|cache domain containing 1
mm9_v1_chr6_+_4471231_4471253	0.286126	CRX.p2	AK159958|Col1a2|12843|collagen, type I, alpha 2	AK164628|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr8_+_87583954_87584056	0.285568	CRX.p2	AK156709|Fbxw9|68628|F-box and WD-40 domain protein 9	NM_026791|Fbxw9|68628|F-box and WD-40 domain protein 9	BC043658|Fbxw9|68628|F-box and WD-40 domain protein 9
mm9_v1_chr4_+_33219530_33219530	0.284883	CRX.p2	AF024620|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1	NM_008075|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1
mm9_v1_chr16_-_89048013_89048143	0.284166	CRX.p2	AF345293|Krtap16-10|71369|keratin associated protein 16-10	BC132612|Krtap16-8|68484|keratin associated protein 16-8	AF345298|Krtap16-8|68484|keratin associated protein 16-8	BC059086|Krtap16-8|68484|keratin associated protein 16-8	AK003281|Krtap16-8|68484|keratin associated protein 16-8	NM_130856|Krtap16-8|68484|keratin associated protein 16-8
mm9_v1_chr3_+_92796138_92796147	0.283862	CRX.p2	BC060281|Lce3f|69520|late cornified envelope 3F	NM_001018079|Lce3f|69520|late cornified envelope 3F
mm9_v1_chr2_-_126969008_126969192	0.283328	CRX.p2	BC130218|Itpripl1|73338|inositol 1,4,5-triphosphate receptor interacting protein-like 1	AK028913|Itpripl1|73338|inositol 1,4,5-triphosphate receptor interacting protein-like 1	NM_001163527|Itpripl1|73338|inositol 1,4,5-triphosphate receptor interacting protein-like 1
mm9_v1_chr9_+_43118845_43118930	0.281308	CRX.p2	NM_023655|Trim29|72169|tripartite motif-containing 29	BC027353|Trim29|72169|tripartite motif-containing 29
mm9_v1_chrX_-_141884479_141884623	0.280146	CRX.p2	AK053987|Amot|27494|angiomotin
mm9_v1_chr6_+_30561009_30561009	0.278842	CRX.p2	AF466283|Cpa5|74649|carboxypeptidase A5	AK015256|Cpa5|74649|carboxypeptidase A5	NM_144537|Cpa5|74649|carboxypeptidase A5
mm9_v1_chr12_+_88488104_88488148	0.27861	CRX.p2	AB041613|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr3_+_121747377_121747377	0.277953	CRX.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr16_+_4639921_4640005	0.276745	CRX.p2	AK132325|Vasn|246154|vasorin	NM_139307|Vasn|246154|vasorin	AK083684|Vasn|246154|vasorin	AK012169|Vasn|246154|vasorin	BC050274|Vasn|246154|vasorin	AJ458938|Vasn|246154|vasorin
mm9_v1_chr2_-_94252368_94252477	0.276405	CRX.p2	AK212083|Api5|11800|apoptosis inhibitor 5
mm9_v1_chr4_-_138469861_138469885	0.275021	CRX.p2	NM_028453|Otud3|73162|OTU domain containing 3
mm9_v1_chr12_+_25336138_25336389	0.272533	CRX.p2	AK038397|Klf11|194655|Kruppel-like factor 11	AK050156|Klf11|194655|Kruppel-like factor 11	NM_178357|Klf11|194655|Kruppel-like factor 11	BC060642|Klf11|194655|Kruppel-like factor 11	AK161233|Klf11|194655|Kruppel-like factor 11	AK082838|Klf11|194655|Kruppel-like factor 11	AK036618|Klf11|194655|Kruppel-like factor 11	AK089044|Klf11|194655|Kruppel-like factor 11	AK084913|Klf11|194655|Kruppel-like factor 11	AK085319|Klf11|194655|Kruppel-like factor 11	AK054170|Klf11|194655|Kruppel-like factor 11	AJ459773|Klf11|194655|Kruppel-like factor 11
mm9_v1_chr11_-_70043291_70043299	0.27098	CRX.p2	NM_007528|Bcl6b|12029|B-cell CLL/lymphoma 6, member B
mm9_v1_chr11_-_60590669_60590737	0.268333	CRX.p2	BC099689|Top3a|21975|topoisomerase (DNA) III alpha
mm9_v1_chr15_-_82953171_82953235	0.266013	CRX.p2	AK036247|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK159553|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK003698|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168850|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK153565|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK032596|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK146821|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168189|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK088456|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	NM_029101|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm9_v1_chr11_-_102786403_102786422	0.26361	CRX.p2	AK156592|Kif18b|70218|kinesin family member 18B	BC057614|Kif18b|70218|kinesin family member 18B
mm9_v1_chr7_+_54110446_54110470	0.263593	CRX.p2	AK190050|Ldha|16828|lactate dehydrogenase A	AK180599|Ldha|16828|lactate dehydrogenase A	AK185842|Ldha|16828|lactate dehydrogenase A	AK191965|Ldha|16828|lactate dehydrogenase A	AK201958|Ldha|16828|lactate dehydrogenase A	AK202966|Ldha|16828|lactate dehydrogenase A	AK204947|Ldha|16828|lactate dehydrogenase A	AK203463|Ldha|16828|lactate dehydrogenase A	AK204382|Ldha|16828|lactate dehydrogenase A	AK203623|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr9_-_96379093_96379128	0.261448	CRX.p2	AK006703|Rnf7|19823|ring finger protein 7
mm9_v1_chr8_-_36028698_36028768	0.260713	CRX.p2	BC057370|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	AK080913|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	NM_175091|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm9_v1_chr1_+_21373636_21373636	0.260664	CRX.p2	AK139842|Khdc1b|98582|KH domain containing 1B	NM_001113187|Khdc1b|98582|KH domain containing 1B
mm9_v1_chr4_-_118846774_118846793	0.2601	CRX.p2	BC108395|Zfp691|195522|zinc finger protein 691	AK170239|Zfp691|195522|zinc finger protein 691
mm9_v1_chr1_-_173152634_173152646	0.259053	CRX.p2	AK028388|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)	NM_001037170|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr1_+_180117854_180117958	0.257657	CRX.p2	BC002200|Pppde1|78825|PPPDE peptidase domain containing 1	AK160733|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr9_+_50924105_50924222	0.257531	CRX.p2	AB050983|Btg4|56057|B-cell translocation gene 4	AK136149|Btg4|56057|B-cell translocation gene 4	AK136185|Btg4|56057|B-cell translocation gene 4	NM_019493|Btg4|56057|B-cell translocation gene 4	AK136041|Btg4|56057|B-cell translocation gene 4	AK136124|Btg4|56057|B-cell translocation gene 4	AK162122|Btg4|56057|B-cell translocation gene 4	AK163407|Btg4|56057|B-cell translocation gene 4	BC066811|Btg4|56057|B-cell translocation gene 4	AJ005120|Btg4|56057|B-cell translocation gene 4
mm9_v1_chr3_+_129581477_129581610	0.254786	CRX.p2	BC051117|Pla2g12a|66350|phospholipase A2, group XIIA	AK010011|Pla2g12a|66350|phospholipase A2, group XIIA	NM_023196|Pla2g12a|66350|phospholipase A2, group XIIA	AY007381|Pla2g12a|66350|phospholipase A2, group XIIA	AK010174|Pla2g12a|66350|phospholipase A2, group XIIA	BC026812|Pla2g12a|66350|phospholipase A2, group XIIA	AK003183|Pla2g12a|66350|phospholipase A2, group XIIA	AK012414|Pla2g12a|66350|phospholipase A2, group XIIA	AK163693|Pla2g12a|66350|phospholipase A2, group XIIA
mm9_v1_chr9_-_26807096_26807161	0.25317	CRX.p2	AK029897|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8	BC037644|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8	BC026535|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8	AK009379|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8	AK077335|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8	AK019502|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8	NM_025862|Acad8|66948|acyl-Coenzyme A dehydrogenase family, member 8
mm9_v1_chr10_+_76731607_76731785	0.252543	CRX.p2	AK218752|Pofut2|80294|protein O-fucosyltransferase 2	AK206420|Pofut2|80294|protein O-fucosyltransferase 2
mm9_v1_chr2_+_91493364_91493364	0.251396	CRX.p2	AK084622|Arhgap1|228359|Rho GTPase activating protein 1	NM_146124|Arhgap1|228359|Rho GTPase activating protein 1
mm9_v1_chr2_+_112124767_112124844	0.249473	CRX.p2	AF211855|Slc12a6|107723|solute carrier family 12, member 6	NM_133648|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr4_-_58021900_58021995	0.249351	CRX.p2	AY495589|Txndc8|67402|thioredoxin domain containing 8	BC049564|Txndc8|67402|thioredoxin domain containing 8	AK006683|Txndc8|67402|thioredoxin domain containing 8	AK015240|Txndc8|67402|thioredoxin domain containing 8	BC116763|Txndc8|67402|thioredoxin domain containing 8	BC116765|Txndc8|67402|thioredoxin domain containing 8	BC144839|Txndc8|67402|thioredoxin domain containing 8	BC144840|Txndc8|67402|thioredoxin domain containing 8	NM_026132|Txndc8|67402|thioredoxin domain containing 8
mm9_v1_chr4_+_138331649_138331724	0.248646	CRX.p2	AF169407|Pla2g2d|18782|phospholipase A2, group IID	AF169408|Pla2g2d|18782|phospholipase A2, group IID	NM_011109|Pla2g2d|18782|phospholipase A2, group IID	BC111806|Pla2g2d|18782|phospholipase A2, group IID	AK171797|Pla2g2d|18782|phospholipase A2, group IID	AF112983|Pla2g2d|18782|phospholipase A2, group IID	AK018005|Pla2g2d|18782|phospholipase A2, group IID	AK157392|Pla2g2d|18782|phospholipase A2, group IID	AF124374|Pla2g2d|18782|phospholipase A2, group IID	AK158364|Pla2g2d|18782|phospholipase A2, group IID	AK172367|Pla2g2d|18782|phospholipase A2, group IID
mm9_v1_chr11_-_97213379_97213390	0.24857	CRX.p2	AK038894|Gpr179|217143|G protein-coupled receptor 179	NM_001081220|Gpr179|217143|G protein-coupled receptor 179	AK030625|Gpr179|217143|G protein-coupled receptor 179
mm9_v1_chr3_+_3508029_3508207	0.247878	CRX.p2	AK143816|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	NM_013920|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	AJ242626|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	BC125519|Hnf4g|30942|hepatocyte nuclear factor 4, gamma
mm9_v1_chr3_+_80840609_80840648	0.247519	CRX.p2	AK033734|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr3_+_96836314_96836366	0.245003	CRX.p2	AY390401|Gja5|14613|gap junction protein, alpha 5	BC053054|Gja5|14613|gap junction protein, alpha 5	NM_008121|Gja5|14613|gap junction protein, alpha 5	AK137069|Gja5|14613|gap junction protein, alpha 5
mm9_v1_chr17_-_46693110_46693149	0.244692	CRX.p2	NM_020493|Srf|20807|serum response factor	BC051950|Srf|20807|serum response factor
mm9_v1_chr5_-_31504258_31504301	0.24355	CRX.p2	AK052459|Zfp513|101023|zinc finger protein 513
mm9_v1_chr17_+_24806616_24806711	0.242682	CRX.p2	AK131127|Zfp598|213753|zinc finger protein 598	BC050859|Zfp598|213753|zinc finger protein 598	NM_183149|Zfp598|213753|zinc finger protein 598
mm9_v1_chr2_+_25417458_25417557	0.242322	CRX.p2	
mm9_v1_chr5_-_31490075_31490203	0.241762	CRX.p2	
mm9_v1_chr11_-_40562329_40562432	0.240758	CRX.p2	
mm9_v1_chr15_-_63640293_63640293	0.239963	CRX.p2	AK137662|Gsdmc|83492|gasdermin C	NM_031378|Gsdmc|83492|gasdermin C
mm9_v1_chr15_-_82210591_82210704	0.239705	CRX.p2	BC016256|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	AK086555|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	BC006853|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_001163472|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_019823|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22
mm9_v1_chr5_-_137918291_137918291	0.239023	CRX.p2	NM_011741|Zan|22635|zonadhesin	U97068|Zan|22635|zonadhesin
mm9_v1_chr9_+_57977155_57977155	0.238718	CRX.p2	AF062476|Stra6|20897|stimulated by retinoic acid gene 6	NM_009291|Stra6|20897|stimulated by retinoic acid gene 6
mm9_v1_chr11_-_79067893_79067979	0.238331	CRX.p2	AF033186|Wsb1|78889|WD repeat and SOCS box-containing 1	BC053391|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr14_-_31832165_31832254	0.236873	CRX.p2	BC037996|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY181025|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY185498|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK087757|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167183|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	BC018560|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK077523|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chr10_-_29255606_29255672	0.236448	CRX.p2	BC103794|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK076308|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK013366|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AB055811|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK133916|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	NM_028351|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)
mm9_v1_chr2_-_28438389_28438521	0.235635	CRX.p2	AK045419|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr14_+_121310342_121310481	0.235237	CRX.p2	AK161668|Ipo5|70572|importin 5	NM_023579|Ipo5|70572|importin 5	AK079134|Ipo5|70572|importin 5	AK049422|Ipo5|70572|importin 5	AK169664|Ipo5|70572|importin 5	AK053681|Ipo5|70572|importin 5	AK017701|Ipo5|70572|importin 5	AK167303|Ipo5|70572|importin 5	AF294327|Ipo5|70572|importin 5	BC052392|Ipo5|70572|importin 5
mm9_v1_chrX_-_130696466_130696502	0.234287	CRX.p2	AY534249|Xkrx|331524|X Kell blood group precursor related X linked	NM_183319|Xkrx|331524|X Kell blood group precursor related X linked	BC150896|Xkrx|331524|X Kell blood group precursor related X linked	BC150897|Xkrx|331524|X Kell blood group precursor related X linked
mm9_v1_chr9_-_95758738_95758738	0.234157	CRX.p2	BC053441|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene	NM_028533|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene
mm9_v1_chr10_-_79781499_79781649	0.23311	CRX.p2	
mm9_v1_chr1_-_36301093_36301156	0.231678	CRX.p2	BC062936|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	BC068283|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK050532|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	NM_198899|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr4_+_33149973_33150101	0.23026	CRX.p2	AF024621|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	NM_008076|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	BC057957|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
mm9_v1_chr6_+_52663700_52663811	0.230034	CRX.p2	NM_025816|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK004574|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK146076|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK171136|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC014798|Tax1bp1|52440|Tax1 (human T-cell leukemia virus type I) binding protein 1
mm9_v1_chr18_+_37480034_37480222	0.228274	CRX.p2	AK028661|Pcdhb5|93876|protocadherin beta 5	NM_053130|Pcdhb5|93876|protocadherin beta 5	AK049825|Pcdhb5|93876|protocadherin beta 5	BC141147|Pcdhb5|93876|protocadherin beta 5	AY013787|Pcdhb5|93876|protocadherin beta 5
mm9_v1_chr8_-_28338915_28339032	0.227458	CRX.p2	AF193027|Adrb3|11556|adrenergic receptor, beta 3	BC132000|Adrb3|11556|adrenergic receptor, beta 3
mm9_v1_chr18_+_65048630_65048682	0.226708	CRX.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr9_-_107888239_107888272	0.225668	CRX.p2	NM_026597|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr4_+_116692006_116692070	0.22479	CRX.p2	NM_001111277|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	NM_175135|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172173|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK145856|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172302|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3
mm9_v1_chr5_+_32535080_32535120	0.223851	CRX.p2	AK030142|Plb1|665270|phospholipase B1	NM_030072|Plb1|665270|phospholipase B1	AK015301|Plb1|665270|phospholipase B1	AK019494|Plb1|665270|phospholipase B1	AK015993|Plb1|665270|phospholipase B1
mm9_v1_chr4_-_143998305_143998366	0.222859	CRX.p2	AK167683|Pramef12|77632|PRAME family member 12	BC066168|Pramef12|77632|PRAME family member 12	AK019795|Pramef12|77632|PRAME family member 12	NM_029948|Pramef12|77632|PRAME family member 12
mm9_v1_chr2_-_69550662_69550662	0.222634	CRX.p2	BC075689|Fastkd1|320720|FAST kinase domains 1	NM_177244|Fastkd1|320720|FAST kinase domains 1
mm9_v1_chr3_+_134944239_134944255	0.21913	CRX.p2	BC036998|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr13_-_3944594_3944594	0.219064	CRX.p2	AK148451|Ucn3|83428|urocortin 3	NM_031250|Ucn3|83428|urocortin 3
mm9_v1_chr3_+_51219882_51219968	0.21897	CRX.p2	NM_053089|Naa15|74838|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm9_v1_chr6_+_72253241_72253241	0.218255	CRX.p2	NM_147779|Sftpb|20388|surfactant associated protein B
mm9_v1_chr9_-_70782614_70782614	0.217867	CRX.p2	BC021841|Lipc|15450|lipase, hepatic	NM_008280|Lipc|15450|lipase, hepatic
mm9_v1_chr10_-_94786198_94786320	0.216579	CRX.p2	AJ224740|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK131713|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain
mm9_v1_chr1_+_39044599_39044675	0.215705	CRX.p2	AK168509|Pdcl3|68833|phosducin-like 3	BC005601|Pdcl3|68833|phosducin-like 3	AK078372|Pdcl3|68833|phosducin-like 3	NM_026850|Pdcl3|68833|phosducin-like 3	AK004334|Pdcl3|68833|phosducin-like 3	AK169572|Pdcl3|68833|phosducin-like 3
mm9_v1_chr13_-_67407347_67407402	0.211989	CRX.p2	NM_001003666|Zfp457|431706|zinc finger protein 457
mm9_v1_chr6_-_25759225_25759245	0.21193	CRX.p2	AK036052|Pot1a|101185|protection of telomeres 1A	NM_133931|Pot1a|101185|protection of telomeres 1A	AK005318|Pot1a|101185|protection of telomeres 1A
mm9_v1_chr18_-_9282615_9282806	0.209973	CRX.p2	AJ414562|Gjd4|225152|gap junction protein, delta 4	AK053016|Gjd4|225152|gap junction protein, delta 4	BC137984|Gjd4|225152|gap junction protein, delta 4	AK034663|Gjd4|225152|gap junction protein, delta 4	NM_153086|Gjd4|225152|gap junction protein, delta 4
mm9_v1_chr6_-_25759187_25759219	0.209449	CRX.p2	BC016121|Pot1a|101185|protection of telomeres 1A	AK135346|Pot1a|101185|protection of telomeres 1A	AK137376|Pot1a|101185|protection of telomeres 1A	AK075661|Pot1a|101185|protection of telomeres 1A	AK085041|Pot1a|101185|protection of telomeres 1A	AK040864|Pot1a|101185|protection of telomeres 1A
mm9_v1_chr16_-_22811458_22811482	0.209059	CRX.p2	BC056452|Crygs|12970|crystallin, gamma S	AF032995|Crygs|12970|crystallin, gamma S	AK143060|Crygs|12970|crystallin, gamma S	NM_009967|Crygs|12970|crystallin, gamma S
mm9_v1_chr14_-_101599285_101599285	0.208605	CRX.p2	NM_029680|1700110M21Rik|76627|RIKEN cDNA 1700110M21 gene
mm9_v1_chr10_+_62524324_62524364	0.208599	CRX.p2	AK143947|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	AK002802|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	BC019997|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	NM_026701|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1
mm9_v1_chr8_+_28558141_28558141	0.206066	CRX.p2	AK015012|Poteg|70952|POTE ankyrin domain family, member G	AK015165|Poteg|70952|POTE ankyrin domain family, member G	AK015473|Poteg|70952|POTE ankyrin domain family, member G	DQ298444|Poteg|70952|POTE ankyrin domain family, member G	DQ517440|Poteg|70952|POTE ankyrin domain family, member G	NM_026256|Poteg|70952|POTE ankyrin domain family, member G	NM_027618|Poteg|70952|POTE ankyrin domain family, member G
mm9_v1_chr4_+_155387803_155387982	0.206034	CRX.p2	NM_011659|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139239|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139266|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC065782|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	Z21674|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4
mm9_v1_chr5_+_38126757_38126797	0.205492	CRX.p2	NM_001081106|Cytl1|231162|cytokine-like 1	BC116224|Cytl1|231162|cytokine-like 1	BC116225|Cytl1|231162|cytokine-like 1	EF108311|Cytl1|231162|cytokine-like 1	BC063103|Cytl1|231162|cytokine-like 1
mm9_v1_chr2_+_155833791_155833870	0.204667	CRX.p2	BC057130|Ergic3|66366|ERGIC and golgi 3	AK050285|Ergic3|66366|ERGIC and golgi 3	BC043720|Ergic3|66366|ERGIC and golgi 3	AK009350|Ergic3|66366|ERGIC and golgi 3	AK013942|Ergic3|66366|ERGIC and golgi 3	NM_025516|Ergic3|66366|ERGIC and golgi 3
mm9_v1_chr1_+_24685556_24685610	0.202843	CRX.p2	BC025579|Lmbrd1|68421|LMBR1 domain containing 1	BC031902|Lmbrd1|68421|LMBR1 domain containing 1	AK167080|Lmbrd1|68421|LMBR1 domain containing 1	AK152170|Lmbrd1|68421|LMBR1 domain containing 1	AK153237|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr5_-_146617411_146617451	0.201675	CRX.p2	BC125522|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	AB039380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	NM_177380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44
mm9_v1_chr11_-_70043222_70043264	0.201335	CRX.p2	AB011665|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	BC090998|Bcl6b|12029|B-cell CLL/lymphoma 6, member B	AK156733|Bcl6b|12029|B-cell CLL/lymphoma 6, member B
mm9_v1_chr3_+_90318681_90318681	0.199839	CRX.p2	NM_009113|S100a13|20196|S100 calcium binding protein A13
mm9_v1_chr7_+_114240980_114240980	0.199373	CRX.p2	BC139721|Olfr17|18314|olfactory receptor 17	BC140168|Olfr17|18314|olfactory receptor 17	BC143142|Olfr17|18314|olfactory receptor 17	BC143195|Olfr17|18314|olfactory receptor 17	NM_020598|Olfr17|18314|olfactory receptor 17
mm9_v1_chr7_+_138554180_138554255	0.197861	CRX.p2	BC044826|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK004889|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK076535|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK152325|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC011235|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC035231|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain
mm9_v1_chr4_+_133036046_133036100	0.197358	CRX.p2	AK137659|Fam46b|100342|family with sequence similarity 46, member B	NM_175307|Fam46b|100342|family with sequence similarity 46, member B	AK163215|Fam46b|100342|family with sequence similarity 46, member B	AK028944|Fam46b|100342|family with sequence similarity 46, member B	AK135706|Fam46b|100342|family with sequence similarity 46, member B	BC038001|Fam46b|100342|family with sequence similarity 46, member B
mm9_v1_chr9_-_57966613_57966629	0.197249	CRX.p2	AK166434|Ccdc33|382077|coiled-coil domain containing 33	AK145264|Ccdc33|382077|coiled-coil domain containing 33	NM_001166282|Ccdc33|382077|coiled-coil domain containing 33
mm9_v1_chr1_+_74708306_74708411	0.196923	CRX.p2	BC085151|Ttll4|67534|tubulin tyrosine ligase-like family, member 4	NM_001014974|Ttll4|67534|tubulin tyrosine ligase-like family, member 4
mm9_v1_chr2_-_165225861_165225904	0.196836	CRX.p2	BC020160|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	AK014751|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	NM_029021|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	AK042271|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene
mm9_v1_chr10_+_82296695_82296695	0.196249	CRX.p2	AF333036|Txnrd1|50493|thioredoxin reductase 1	NM_001042523|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr10_-_62254978_62254996	0.195921	CRX.p2	BC079652|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC010199|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr5_-_33972265_33972318	0.195041	CRX.p2	AK017321|Fam53a|74504|family with sequence similarity 53, member A	NM_178390|Fam53a|74504|family with sequence similarity 53, member A
mm9_v1_chr7_-_133935952_133936049	0.193836	CRX.p2	BC001993|Ppp4c|56420|protein phosphatase 4, catalytic subunit	NM_019674|Ppp4c|56420|protein phosphatase 4, catalytic subunit	AF088911|Ppp4c|56420|protein phosphatase 4, catalytic subunit	BC013806|Ppp4c|56420|protein phosphatase 4, catalytic subunit
mm9_v1_chr19_+_41624128_41624128	0.193711	CRX.p2	AK041090|Lcor|212391|ligand dependent nuclear receptor corepressor	NM_172154|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr16_-_93930061_93930061	0.191813	CRX.p2	NM_001165926|Cldn14|56173|claudin 14
mm9_v1_chrX_+_66015013_66015108	0.19085	CRX.p2	BC099411|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166619|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166620|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_174993|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC138087|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145139|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145140|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171922|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171923|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171947|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171948|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AK076190|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AY214130|Fmr1nb|207854|fragile X mental retardation 1 neighbor
mm9_v1_chr5_-_139936486_139936511	0.190592	CRX.p2	NM_028469|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chr4_+_62280692_62280740	0.18949	CRX.p2	AF319519|Rgs3|50780|regulator of G-protein signaling 3	NM_001081650|Rgs3|50780|regulator of G-protein signaling 3	NM_134257|Rgs3|50780|regulator of G-protein signaling 3	AK028445|Rgs3|50780|regulator of G-protein signaling 3	AF350047|Rgs3|50780|regulator of G-protein signaling 3
mm9_v1_chrX_+_89735287_89735342	0.188825	CRX.p2	BC100438|Gm5941|546347|predicted gene 5941	NM_001034103|Gm5941|546347|predicted gene 5941	BC051629|Gm5941|546347|predicted gene 5941
mm9_v1_chr18_-_6202199_6202203	0.186444	CRX.p2	AK038217|Kif5b|16573|kinesin family member 5B
mm9_v1_chr2_-_120911477_120911576	0.18605	CRX.p2	BC116266|Tgm5|74176|transglutaminase 5	BC116267|Tgm5|74176|transglutaminase 5	AK009196|Tgm5|74176|transglutaminase 5	NM_028799|Tgm5|74176|transglutaminase 5	AK037074|Tgm5|74176|transglutaminase 5	AK079431|Tgm5|74176|transglutaminase 5	AK132482|Tgm5|74176|transglutaminase 5
mm9_v1_chrX_+_54306724_54306791	0.184046	CRX.p2	AK012522|Htatsf1|72459|HIV TAT specific factor 1	BC037711|Htatsf1|72459|HIV TAT specific factor 1	NM_028242|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr9_-_96378951_96379045	0.18206	CRX.p2	AK007588|Rnf7|19823|ring finger protein 7	BC011127|Rnf7|19823|ring finger protein 7	AK002628|Rnf7|19823|ring finger protein 7	AK003248|Rnf7|19823|ring finger protein 7	AK003963|Rnf7|19823|ring finger protein 7	AK011328|Rnf7|19823|ring finger protein 7	AK146030|Rnf7|19823|ring finger protein 7	NM_011279|Rnf7|19823|ring finger protein 7	AF092877|Rnf7|19823|ring finger protein 7
mm9_v1_chr8_-_63433528_63433596	0.180985	CRX.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr9_+_120019498_120019516	0.1809	CRX.p2	AK078385|Slc25a38|208638|solute carrier family 25, member 38	BC010801|Slc25a38|208638|solute carrier family 25, member 38	NM_144793|Slc25a38|208638|solute carrier family 25, member 38
mm9_v1_chr7_-_52781502_52781637	0.179653	CRX.p2	BC138485|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	BC138486|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK154697|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	X51829|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK167317|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK079339|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	AK136336|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A	NM_008654|Ppp1r15a|17872|protein phosphatase 1, regulatory (inhibitor) subunit 15A
mm9_v1_chr5_+_120566489_120566582	0.179013	CRX.p2	AK146493|Rbm19|74111|RNA binding motif protein 19	AK053511|Rbm19|74111|RNA binding motif protein 19	BC025619|Rbm19|74111|RNA binding motif protein 19	NM_028762|Rbm19|74111|RNA binding motif protein 19	AK167100|Rbm19|74111|RNA binding motif protein 19	BC034010|Rbm19|74111|RNA binding motif protein 19
mm9_v1_chr2_+_30199519_30199667	0.178876	CRX.p2	AK198439|Nup188|227699|nucleoporin 188
mm9_v1_chr2_-_13413502_13413502	0.178121	CRX.p2	NM_001081084|Cubn|65969|cubilin (intrinsic factor-cobalamin receptor)
mm9_v1_chr18_+_37607310_37607496	0.176977	CRX.p2	AK032156|Pcdhb14|93885|protocadherin beta 14	NM_053139|Pcdhb14|93885|protocadherin beta 14	AK008662|Pcdhb14|93885|protocadherin beta 14	BC059821|Pcdhb14|93885|protocadherin beta 14	AK083065|Pcdhb14|93885|protocadherin beta 14	AY013775|Pcdhb14|93885|protocadherin beta 14
mm9_v1_chr15_+_10107168_10107535	0.17651	CRX.p2	AK054381|Prlr|19116|prolactin receptor	AK143335|Prlr|19116|prolactin receptor	AK050317|Prlr|19116|prolactin receptor	BC005555|Prlr|19116|prolactin receptor	BC006652|Prlr|19116|prolactin receptor	AK081676|Prlr|19116|prolactin receptor
mm9_v1_chr7_-_52722144_52722269	0.176051	CRX.p2	AY095934|Bax|12028|BCL2-associated X protein	L22472|Bax|12028|BCL2-associated X protein	AK149994|Bax|12028|BCL2-associated X protein	AK013298|Bax|12028|BCL2-associated X protein	BC053380|Bax|12028|BCL2-associated X protein	BC018228|Bax|12028|BCL2-associated X protein	AK159233|Bax|12028|BCL2-associated X protein	NM_007527|Bax|12028|BCL2-associated X protein
mm9_v1_chr4_-_116855158_116855228	0.17591	CRX.p2	AK150222|Kif2c|73804|kinesin family member 2C	AK088047|Kif2c|73804|kinesin family member 2C	BC006841|Kif2c|73804|kinesin family member 2C	AK015046|Kif2c|73804|kinesin family member 2C	NM_134471|Kif2c|73804|kinesin family member 2C
mm9_v1_chr5_+_130505237_130505255	0.175893	CRX.p2	BC012676|Crcp|12909|calcitonin gene-related peptide-receptor component protein
mm9_v1_chr7_-_112959577_112959585	0.175405	CRX.p2	AK007828|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr14_-_69151731_69151797	0.175124	CRX.p2	AF013107|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK136692|Adam7|11500|a disintegrin and metallopeptidase domain 7	NM_007402|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK020312|Adam7|11500|a disintegrin and metallopeptidase domain 7
mm9_v1_chr5_-_109985883_109985911	0.175043	CRX.p2	AK170466|Crlf2|57914|cytokine receptor-like factor 2
mm9_v1_chr2_-_132706580_132706636	0.174169	CRX.p2	AY325108|Lrrn4|320974|leucine rich repeat neuronal 4	AK080889|Lrrn4|320974|leucine rich repeat neuronal 4	NM_177303|Lrrn4|320974|leucine rich repeat neuronal 4	AK085246|Lrrn4|320974|leucine rich repeat neuronal 4
mm9_v1_chr17_-_6654924_6655063	0.174097	CRX.p2	EF110999|Dynlt1c|100040563|dynein light chain Tctex-type 1C	M25825|Dynlt1b|21648|dynein light chain Tctex-type 1D	AK005569|Dynlt1f|100040531|dynein light chain Tctex-type 1F	AK168478|Dynlt1c|100040563|dynein light chain Tctex-type 1C	NM_001166630|Dynlt1c|100040563|dynein light chain Tctex-type 1C	NM_001166627|Dynlt1f|100040531|dynein light chain Tctex-type 1F
mm9_v1_chr5_+_88237145_88237179	0.174	CRX.p2	AK164767|Csn1s2b|12992|casein alpha s2-like B	AK085744|Csn1s2b|12992|casein alpha s2-like B	NM_009973|Csn1s2b|12992|casein alpha s2-like B	AK164763|Csn1s2b|12992|casein alpha s2-like B	AK021343|Csn1s2b|12992|casein alpha s2-like B	AK052780|Csn1s2b|12992|casein alpha s2-like B	AK052789|Csn1s2b|12992|casein alpha s2-like B	AK085747|Csn1s2b|12992|casein alpha s2-like B	AK164768|Csn1s2b|12992|casein alpha s2-like B	AK021337|Csn1s2b|12992|casein alpha s2-like B	AK164795|Csn1s2b|12992|casein alpha s2-like B	BC002084|Csn1s2b|12992|casein alpha s2-like B	J00379|Csn1s2b|12992|casein alpha s2-like B	V00740|Csn1s2b|12992|casein alpha s2-like B
mm9_v1_chr10_+_89280918_89280988	0.171636	CRX.p2	AK079985|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK046432|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK008586|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like
mm9_v1_chr8_-_42300504_42300520	0.170712	CRX.p2	AF478470|Fgl1|234199|fibrinogen-like protein 1	AK083397|Fgl1|234199|fibrinogen-like protein 1	NM_145594|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr17_-_24484196_24484196	0.169975	CRX.p2	AB112584|Abca17|381072|ATP-binding cassette, sub-family A (ABC1), member 17	NM_001031621|Abca17|381072|ATP-binding cassette, sub-family A (ABC1), member 17
mm9_v1_chr13_-_27673996_27674039	0.168538	CRX.p2	AF525158|Prl8a1|73244|prolactin family 8, subfamily a, member 1	BC109185|Prl8a1|73244|prolactin family 8, subfamily a, member 1	BC109186|Prl8a1|73244|prolactin family 8, subfamily a, member 1	AK005485|Prl8a1|73244|prolactin family 8, subfamily a, member 1	AK014414|Prl8a1|73244|prolactin family 8, subfamily a, member 1	NM_028477|Prl8a1|73244|prolactin family 8, subfamily a, member 1
mm9_v1_chr9_-_44226073_44226112	0.166998	CRX.p2	BC096560|Ccdc84|382073|coiled-coil domain containing 84	BC055929|Ccdc84|382073|coiled-coil domain containing 84	NM_201372|Ccdc84|382073|coiled-coil domain containing 84	AK171754|Ccdc84|382073|coiled-coil domain containing 84	AK052757|Ccdc84|382073|coiled-coil domain containing 84	BC116877|Ccdc84|382073|coiled-coil domain containing 84	BC116879|Ccdc84|382073|coiled-coil domain containing 84	BC144712|Ccdc84|382073|coiled-coil domain containing 84	BC144713|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr17_-_57150708_57150759	0.166553	CRX.p2	BC003336|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	BC023081|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	NM_133801|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168236|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168243|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK013002|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK078048|Gtf2f1|98053|general transcription factor IIF, polypeptide 1
mm9_v1_chr8_-_22814073_22814118	0.165621	CRX.p2	AY761184|AY761184|382000|cDNA sequence AY761184	AK008498|AY761184|382000|cDNA sequence AY761184	NM_001007582|AY761184|382000|cDNA sequence AY761184
mm9_v1_chr9_-_109098475_109098488	0.165284	CRX.p2	BC119542|Fbxw13|211305|F-box and WD-40 domain protein 13	BC127237|Fbxw13|211305|F-box and WD-40 domain protein 13	AK054339|Fbxw13|211305|F-box and WD-40 domain protein 13	NM_177598|Fbxw13|211305|F-box and WD-40 domain protein 13
mm9_v1_chr13_-_29947456_29947544	0.164332	CRX.p2	BC016073|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	NM_144536|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK158546|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK041864|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK018346|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK169761|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK082629|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK045506|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1
mm9_v1_chr1_+_58042183_58042183	0.162798	CRX.p2	NM_001177867|Sgol2|68549|shugoshin-like 2 (S. pombe)
mm9_v1_chr5_-_25211581_25211614	0.162606	CRX.p2	AK085093|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	AK020192|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	Y17040|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	BC033417|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	NM_020570|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2
mm9_v1_chr5_+_117583596_117583674	0.161325	CRX.p2	AK155208|Taok3|330177|TAO kinase 3	NM_001081308|Taok3|330177|TAO kinase 3	AK171353|Taok3|330177|TAO kinase 3	AK037817|Taok3|330177|TAO kinase 3	AK042181|Taok3|330177|TAO kinase 3
mm9_v1_chr6_+_58546610_58546665	0.160659	CRX.p2	BC053730|Abcg2|26357|ATP-binding cassette, sub-family G (WHITE), member 2	NM_011920|Abcg2|26357|ATP-binding cassette, sub-family G (WHITE), member 2
mm9_v1_chr4_-_34136995_34137041	0.160098	CRX.p2	AK007270|Spaca1|67652|sperm acrosome associated 1	AK016011|Spaca1|67652|sperm acrosome associated 1	BC147079|Spaca1|67652|sperm acrosome associated 1	BC147080|Spaca1|67652|sperm acrosome associated 1	AK006187|Spaca1|67652|sperm acrosome associated 1	NM_026293|Spaca1|67652|sperm acrosome associated 1
mm9_v1_chr6_+_41342352_41342354	0.159473	CRX.p2	BC132026|Gm5771|436523|predicted gene 5771	BC132030|Gm5771|436523|predicted gene 5771	NM_001038997|Gm5771|436523|predicted gene 5771
mm9_v1_chr4_+_142939652_142939691	0.158817	CRX.p2	BC129964|Lrrc38|242735|leucine rich repeat containing 38	NM_001162983|Lrrc38|242735|leucine rich repeat containing 38	BC129963|Lrrc38|242735|leucine rich repeat containing 38	AK078190|Lrrc38|242735|leucine rich repeat containing 38	AK038658|Lrrc38|242735|leucine rich repeat containing 38
mm9_v1_chr8_+_13785611_13785668	0.158608	CRX.p2	AK020823|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	BC116988|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	BC119035|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	NM_025924|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK033239|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK011127|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK166277|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK016053|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)	AK145471|Upf3a|67031|UPF3 regulator of nonsense transcripts homolog A (yeast)
mm9_v1_chr18_+_39933150_39933172	0.158387	CRX.p2	AK077154|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	NM_011033|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	BC051134|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	AK131715|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2	X75959|Pabpc2|18459|poly(A) binding protein, cytoplasmic 2
mm9_v1_chr11_+_101140325_101140516	0.158264	CRX.p2	AK006754|Cntd1|68107|cyclin N-terminal domain containing 1	AK049116|Cntd1|68107|cyclin N-terminal domain containing 1	BC006866|Cntd1|68107|cyclin N-terminal domain containing 1	AK007245|Cntd1|68107|cyclin N-terminal domain containing 1	NM_026562|Cntd1|68107|cyclin N-terminal domain containing 1
mm9_v1_chr1_+_167225896_167225919	0.156887	CRX.p2	NM_001081126|Gpr161|240888|G protein-coupled receptor 161	BC137659|Gpr161|240888|G protein-coupled receptor 161
mm9_v1_chr8_+_124900561_124900686	0.156819	CRX.p2	AK166802|Zc3h18|76014|zinc finger CCCH-type containing 18	AK031413|Zc3h18|76014|zinc finger CCCH-type containing 18	AK159881|Zc3h18|76014|zinc finger CCCH-type containing 18	BC003319|Zc3h18|76014|zinc finger CCCH-type containing 18
mm9_v1_chr4_+_155079153_155079290	0.155048	CRX.p2	AK148131|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	AK004446|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	AK005220|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	BC016544|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm9_v1_chr13_-_100874021_100874024	0.154101	CRX.p2	AK045292|Bdp1|544971|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB	NM_001081061|Bdp1|544971|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
mm9_v1_chr5_-_37221812_37221913	0.153369	CRX.p2	BC066211|Man2b2|17160|mannosidase 2, alpha B2	AK004900|Man2b2|17160|mannosidase 2, alpha B2	AK040388|Man2b2|17160|mannosidase 2, alpha B2	AK151873|Man2b2|17160|mannosidase 2, alpha B2	AK152349|Man2b2|17160|mannosidase 2, alpha B2	AB006458|Man2b2|17160|mannosidase 2, alpha B2	AK079969|Man2b2|17160|mannosidase 2, alpha B2	AK165376|Man2b2|17160|mannosidase 2, alpha B2	NM_008550|Man2b2|17160|mannosidase 2, alpha B2
mm9_v1_chr18_-_74367400_74367471	0.152847	CRX.p2	AK007138|Ska1|66468|spindle and kinetochore associated complex subunit 1	DQ926863|Ska1|66468|spindle and kinetochore associated complex subunit 1	DQ926864|Ska1|66468|spindle and kinetochore associated complex subunit 1	AK006442|Ska1|66468|spindle and kinetochore associated complex subunit 1	AK013233|Ska1|66468|spindle and kinetochore associated complex subunit 1	AK021226|Ska1|66468|spindle and kinetochore associated complex subunit 1	NM_001164355|Ska1|66468|spindle and kinetochore associated complex subunit 1	NM_025581|Ska1|66468|spindle and kinetochore associated complex subunit 1
mm9_v1_chr19_-_29722826_29722925	0.152793	CRX.p2	AK129447|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC086627|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK137206|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK037287|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC151181|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC151182|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	BC157914|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK041066|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	AK050284|Ermp1|226090|endoplasmic reticulum metallopeptidase 1	NM_001081213|Ermp1|226090|endoplasmic reticulum metallopeptidase 1
mm9_v1_chr4_+_107552352_107552448	0.152578	CRX.p2	AF007862|Magoh|17149|mago-nashi homolog, proliferation-associated (Drosophila)	NM_010760|Magoh|17149|mago-nashi homolog, proliferation-associated (Drosophila)	AF035939|Magoh|17149|mago-nashi homolog, proliferation-associated (Drosophila)	AK011512|Magoh|17149|mago-nashi homolog, proliferation-associated (Drosophila)	BC018176|Magoh|17149|mago-nashi homolog, proliferation-associated (Drosophila)
mm9_v1_chrX_+_160578411_160578593	0.151317	CRX.p2	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr13_-_4522566_4522580	0.150978	CRX.p2	AB097220|Akr1c20|116852|aldo-keto reductase family 1, member C20	BC021607|Akr1c20|116852|aldo-keto reductase family 1, member C20	AK012162|Akr1c20|116852|aldo-keto reductase family 1, member C20	NM_054080|Akr1c20|116852|aldo-keto reductase family 1, member C20
mm9_v1_chrX_+_130722039_130722141	0.150526	CRX.p2	AK016872|Arl13a|74448|ADP-ribosylation factor-like 13A	NM_028947|Arl13a|74448|ADP-ribosylation factor-like 13A	BC100522|Arl13a|74448|ADP-ribosylation factor-like 13A
mm9_v1_chr3_-_135271220_135271233	0.148329	CRX.p2	L28117|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr11_-_115560691_115560842	0.147866	CRX.p2	AK077750|Grb2|14784|growth factor receptor bound protein 2	AK079087|Grb2|14784|growth factor receptor bound protein 2	AK153557|Grb2|14784|growth factor receptor bound protein 2
mm9_v1_chr2_-_34678700_34678700	0.146495	CRX.p2	AF140683|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164768|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr10_+_127452270_127452281	0.144485	CRX.p2	D13544|Prim1|19075|DNA primase, p49 subunit	NM_008921|Prim1|19075|DNA primase, p49 subunit	AK133878|Prim1|19075|DNA primase, p49 subunit	AK169632|Prim1|19075|DNA primase, p49 subunit	AK011456|Prim1|19075|DNA primase, p49 subunit
mm9_v1_chr14_+_8650470_8650537	0.142288	CRX.p2	NM_134080|Flnb|286940|filamin, beta	AK047011|Flnb|286940|filamin, beta
mm9_v1_chr14_-_55560793_55560834	0.142231	CRX.p2	
mm9_v1_chr9_-_64799413_64799413	0.142108	CRX.p2	BC016094|Slc24a1|214111|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	NM_144813|Slc24a1|214111|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
mm9_v1_chr14_+_52898820_52898820	0.142084	CRX.p2	NM_023434|Tox4|268741|TOX high mobility group box family member 4
mm9_v1_chr5_-_88128419_88128445	0.141545	CRX.p2	BC019114|Csn2|12991|casein beta	BC013332|Csn2|12991|casein beta	BC092098|Csn2|12991|casein beta	BC020356|Csn2|12991|casein beta	BC050270|Csn2|12991|casein beta	BC020383|Csn2|12991|casein beta	BC021153|Csn2|12991|casein beta	BC057671|Csn2|12991|casein beta	BC080709|Csn2|12991|casein beta	AK164792|Csn2|12991|casein beta	AK164793|Csn2|12991|casein beta	AK085729|Csn2|12991|casein beta	AK021324|Csn2|12991|casein beta	AK021328|Csn2|12991|casein beta	AK052803|Csn2|12991|casein beta	AK052805|Csn2|12991|casein beta	AK052822|Csn2|12991|casein beta	AK085678|Csn2|12991|casein beta	AK085694|Csn2|12991|casein beta	AK085698|Csn2|12991|casein beta	AK085756|Csn2|12991|casein beta	AK142616|Csn2|12991|casein beta	AK142620|Csn2|12991|casein beta	AK142631|Csn2|12991|casein beta	AK142635|Csn2|12991|casein beta	AK164747|Csn2|12991|casein beta	AK164761|Csn2|12991|casein beta	AK164791|Csn2|12991|casein beta	AK164794|Csn2|12991|casein beta	NM_009972|Csn2|12991|casein beta	X04490|Csn2|12991|casein beta
mm9_v1_chr2_+_32780021_32780044	0.141278	CRX.p2	
mm9_v1_chr5_-_146691425_146691448	0.141079	CRX.p2	BC094062|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	X60452|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	BC010528|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	NM_007818|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	AK149433|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11
mm9_v1_chr18_-_66098706_66098742	0.140846	CRX.p2	BC058757|Rax|19434|retina and anterior neural fold homeobox	AK053517|Rax|19434|retina and anterior neural fold homeobox	AK133951|Rax|19434|retina and anterior neural fold homeobox	AF001906|Rax|19434|retina and anterior neural fold homeobox	U73177|Rax|19434|retina and anterior neural fold homeobox	BC024731|Rax|19434|retina and anterior neural fold homeobox	NM_013833|Rax|19434|retina and anterior neural fold homeobox
mm9_v1_chr17_-_45738863_45738863	0.140188	CRX.p2	NM_001177470|Gm7325|653016|predicted gene 7325
mm9_v1_chr1_+_152166546_152166560	0.139256	CRX.p2	AK020798|Pdc|20028|phosducin	L08075|Pdc|20028|phosducin	NM_001159730|Pdc|20028|phosducin	NM_024458|Pdc|20028|phosducin	BC021920|Pdc|20028|phosducin	BC037176|Pdc|20028|phosducin	BC012507|Pdc|20028|phosducin
mm9_v1_chr10_-_126978704_126978744	0.137942	CRX.p2	BC043675|Lrp1|16971|low density lipoprotein receptor-related protein 1
mm9_v1_chr18_+_75165496_75165648	0.137519	CRX.p2	AK077642|BC031181|407819|cDNA sequence BC031181	BC016084|BC031181|407819|cDNA sequence BC031181	NM_001001181|BC031181|407819|cDNA sequence BC031181	AK131658|BC031181|407819|cDNA sequence BC031181	BC031181|BC031181|407819|cDNA sequence BC031181	BC027819|BC031181|407819|cDNA sequence BC031181	AK180483|BC031181|407819|cDNA sequence BC031181	AK187367|BC031181|407819|cDNA sequence BC031181
mm9_v1_chr7_+_17659388_17659431	0.135812	CRX.p2	BC030357|Psg16|26436|pregnancy specific glycoprotein 16	NM_007676|Psg16|26436|pregnancy specific glycoprotein 16	U34272|Psg16|26436|pregnancy specific glycoprotein 16
mm9_v1_chr5_+_36235967_36236084	0.135274	CRX.p2	BC050814|Afap1|70292|actin filament associated protein 1	NM_027373|Afap1|70292|actin filament associated protein 1	AK161385|Afap1|70292|actin filament associated protein 1	AK080756|Afap1|70292|actin filament associated protein 1	AK129483|Afap1|70292|actin filament associated protein 1	AK147706|Afap1|70292|actin filament associated protein 1
mm9_v1_chr11_-_6130124_6130247	0.134485	CRX.p2	BC131788|Npc1l1|237636|NPC1-like 1	AY437866|Npc1l1|237636|NPC1-like 1	BC131789|Npc1l1|237636|NPC1-like 1	AK078947|Npc1l1|237636|NPC1-like 1	NM_207242|Npc1l1|237636|NPC1-like 1
mm9_v1_chr2_+_172266042_172266209	0.134312	CRX.p2	AK053258|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK010321|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK077823|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	NM_025542|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK009901|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC049072|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK167287|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK028792|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC004803|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK219307|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK209674|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK169588|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK170141|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	AK153121|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC096692|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116442|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC116443|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene	BC127166|2410001C21Rik|66404|RIKEN cDNA 2410001C21 gene
mm9_v1_chr4_-_131909543_131909559	0.131866	CRX.p2	AJ006837|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3	AK076188|Snhg3|399101|small nucleolar RNA host gene (non-protein coding) 3
mm9_v1_chr17_+_47863790_47863799	0.13048	CRX.p2	AK008886|Pgc|109820|progastricsin (pepsinogen C)	AK008959|Pgc|109820|progastricsin (pepsinogen C)	AK160474|Pgc|109820|progastricsin (pepsinogen C)	NM_025973|Pgc|109820|progastricsin (pepsinogen C)	BC099409|Pgc|109820|progastricsin (pepsinogen C)
mm9_v1_chr14_+_55551531_55551607	0.12989	CRX.p2	BC120568|Il25|140806|interleukin 25	BC125524|Il25|140806|interleukin 25	BC144962|Il25|140806|interleukin 25	NM_080729|Il25|140806|interleukin 25	AF458060|Il25|140806|interleukin 25
mm9_v1_chr19_-_28085534_28085655	0.129216	CRX.p2	AK030008|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	AK140928|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	BC017598|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	AK041120|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	NM_011265|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)
mm9_v1_chr6_+_57087346_57087346	0.12921	CRX.p2	BC104398|Vmn1r11|113860|vomeronasal 1 receptor 11	BC104399|Vmn1r11|113860|vomeronasal 1 receptor 11	NM_053233|Vmn1r11|113860|vomeronasal 1 receptor 11
mm9_v1_chrX_+_12858142_12858215	0.128972	CRX.p2	AK140990|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	NM_010028|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	Z38117|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	AK163250|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	BC150862|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	BC172016|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	L25126|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr3_-_107434441_107434654	0.128723	CRX.p2	AK194900|Fam40a|229707|family with sequence similarity 40, member A	BC023952|Fam40a|229707|family with sequence similarity 40, member A	AK032065|Fam40a|229707|family with sequence similarity 40, member A	AK032642|Fam40a|229707|family with sequence similarity 40, member A	AK035833|Fam40a|229707|family with sequence similarity 40, member A	AK148011|Fam40a|229707|family with sequence similarity 40, member A	AK169644|Fam40a|229707|family with sequence similarity 40, member A	NM_153563|Fam40a|229707|family with sequence similarity 40, member A
mm9_v1_chr3_+_105673775_105673824	0.128539	CRX.p2	BC100416|Adora3|11542|adenosine A3 receptor	NM_001174169|Adora3|11542|adenosine A3 receptor	AK016304|Adora3|11542|adenosine A3 receptor	AK005581|Adora3|11542|adenosine A3 receptor	NM_027025|Adora3|11542|adenosine A3 receptor
mm9_v1_chr18_-_62915799_62916000	0.127411	CRX.p2	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr17_+_56909672_56909698	0.127059	CRX.p2	NM_001195673|Prr22|224908|proline rich 22
mm9_v1_chr2_+_148660891_148660907	0.126707	CRX.p2	AK006429|Cst9|13013|cystatin 9	BC048486|Cst9|13013|cystatin 9	AB017157|Cst9|13013|cystatin 9
mm9_v1_chr11_+_31865591_31865642	0.125549	CRX.p2	AK015006|4930524B15Rik|67592|RIKEN cDNA 4930524B15 gene	AK015879|4930524B15Rik|67592|RIKEN cDNA 4930524B15 gene	NM_026262|4930524B15Rik|67592|RIKEN cDNA 4930524B15 gene	BC114574|4930524B15Rik|67592|RIKEN cDNA 4930524B15 gene
mm9_v1_chr8_-_74035667_74035683	0.124139	CRX.p2	NM_032398|Plvap|84094|plasmalemma vesicle associated protein
mm9_v1_chr1_-_121545442_121545576	0.123485	CRX.p2	AK034676|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK047523|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK173198|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	BC011476|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044959|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044996|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK079301|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK161141|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK027983|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK037024|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK136125|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK040354|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK167449|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_001113416|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_145506|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr5_+_25021884_25021967	0.120425	CRX.p2	AK133375|Cct8l1|242891|chaperonin containing TCP1, subunit 8 (theta)-like 1	NM_198621|Cct8l1|242891|chaperonin containing TCP1, subunit 8 (theta)-like 1	BC050797|Cct8l1|242891|chaperonin containing TCP1, subunit 8 (theta)-like 1
mm9_v1_chr4_+_53002155_53002181	0.120115	CRX.p2	NM_028529|Nipsnap3a|73398|nipsnap homolog 3A (C. elegans)	AK006782|Nipsnap3a|73398|nipsnap homolog 3A (C. elegans)
mm9_v1_chr2_-_181598918_181598962	0.119845	CRX.p2	AK013066|2810410D24Rik|69254|RIKEN cDNA 2810410D24 gene
mm9_v1_chr16_-_36455460_36455484	0.119668	CRX.p2	AY169236|Stfa3|20863|stefin A3	M92419|Stfa3|20863|stefin A3	BC107224|Stfa3|20863|stefin A3	BC107225|Stfa3|20863|stefin A3	AK014349|Stfa3|20863|stefin A3	NM_025288|Stfa3|20863|stefin A3
mm9_v1_chr5_-_83783923_83784219	0.117575	CRX.p2	AK052302|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AK052378|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AK052276|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	BC107366|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	BC107367|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AF548365|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AK052284|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	NM_153801|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like
mm9_v1_chr2_-_104689616_104690006	0.117424	CRX.p2	AK166405|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC115470|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK035530|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC099390|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK037087|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151011|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151019|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK038703|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_178695|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm9_v1_chr10_-_80024245_80024324	0.117266	CRX.p2	BC039623|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC011438|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC069964|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC054843|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC025511|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK173108|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK012127|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK087016|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	BC052424|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	AK144769|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	NM_025852|Rexo1|66932|REX1, RNA exonuclease 1 homolog (S. cerevisiae)
mm9_v1_chr15_-_74879242_74879259	0.116861	CRX.p2	AK088782|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	AK143577|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	BC010764|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	NM_010741|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1
mm9_v1_chr6_-_124729735_124729744	0.116177	CRX.p2	NM_013588|Lrrc23|16977|leucine rich repeat containing 23	AK015011|Lrrc23|16977|leucine rich repeat containing 23	BC049601|Lrrc23|16977|leucine rich repeat containing 23
mm9_v1_chr4_+_73888400_73888400	0.115798	CRX.p2	BC042424|Kdm4c|76804|lysine (K)-specific demethylase 4C	NM_001172095|Kdm4c|76804|lysine (K)-specific demethylase 4C
mm9_v1_chr7_+_109850836_109850868	0.114757	CRX.p2	AK141545|Olfr558|259097|olfactory receptor 558	NM_147093|Olfr558|259097|olfactory receptor 558
mm9_v1_chr8_-_42300477_42300498	0.113395	CRX.p2	BC021946|Fgl1|234199|fibrinogen-like protein 1	BC029734|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr11_+_62413710_62413732	0.110416	CRX.p2	
mm9_v1_chr13_-_74429744_74429778	0.11026	CRX.p2	AK154152|Ahrr|11624|aryl-hydrocarbon receptor repressor	BC118534|Ahrr|11624|aryl-hydrocarbon receptor repressor	AB015140|Ahrr|11624|aryl-hydrocarbon receptor repressor	NM_009644|Ahrr|11624|aryl-hydrocarbon receptor repressor	AK155711|Ahrr|11624|aryl-hydrocarbon receptor repressor	AK154761|Ahrr|11624|aryl-hydrocarbon receptor repressor
mm9_v1_chr4_+_143436399_143436414	0.109372	CRX.p2	AK054347|Gm13103|194225|predicted gene 13103	NM_177571|Gm13103|194225|predicted gene 13103	BC096438|Gm13103|194225|predicted gene 13103
mm9_v1_chr6_+_4483741_4483796	0.108628	CRX.p2	BC012438|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr5_+_33760994_33761117	0.106263	CRX.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr10_-_62254998_62255005	0.104691	CRX.p2	AF465615|Ccar1|67500|cell division cycle and apoptosis regulator 1	AK012111|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC060130|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC039939|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr17_+_41097513_41097693	0.103972	CRX.p2	AK029425|Mut|17850|methylmalonyl-Coenzyme A mutase	AK012766|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr8_+_129823507_129823551	0.103282	CRX.p2	AY856081|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	AY856082|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013581|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)	NM_001013580|Pard3|93742|par-3 (partitioning defective 3) homolog (C. elegans)
mm9_v1_chr19_-_47993687_47993788	0.102893	CRX.p2	AK171522|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	AK171539|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	AK014762|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	AK220222|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	AK165192|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	AK171911|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	BC063749|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	AK014581|Wdr96|70806|WD repeat domain 96	AK160686|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein	NM_001001738|Itprip|414801|inositol 1,4,5-triphosphate receptor interacting protein
mm9_v1_chr2_+_148660882_148660885	0.102625	CRX.p2	NM_009979|Cst9|13013|cystatin 9	Y18243|Cst9|13013|cystatin 9
mm9_v1_chr4_-_32689356_32689356	0.102419	CRX.p2	NM_010289|Gja10|14610|gap junction protein, alpha 10
mm9_v1_chr12_-_82695968_82696003	0.101824	CRX.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr5_-_87521574_87521580	0.100302	CRX.p2	BC141232|Ugt2b36|231396|UDP glucuronosyltransferase 2 family, polypeptide B36	BC145555|Ugt2b36|231396|UDP glucuronosyltransferase 2 family, polypeptide B36	NM_001029867|Ugt2b36|231396|UDP glucuronosyltransferase 2 family, polypeptide B36	AK149425|Ugt2b36|231396|UDP glucuronosyltransferase 2 family, polypeptide B36
mm9_v1_chr6_-_113550646_113550708	0.0998292	CRX.p2	AK016461|4931417G12Rik|70979|RIKEN cDNA 4931417G12 gene	BC049660|4931417G12Rik|70979|RIKEN cDNA 4931417G12 gene	NM_027633|4931417G12Rik|70979|RIKEN cDNA 4931417G12 gene
mm9_v1_chr17_-_79306331_79306331	0.099575	CRX.p2	NM_001163625|Sult6b1|73671|sulfotransferase family, cytosolic, 6B, member 1
mm9_v1_chrX_+_147955201_147955234	0.0993363	CRX.p2	AK040969|Phf8|320595|PHD finger protein 8	NM_001113354|Phf8|320595|PHD finger protein 8	NM_177201|Phf8|320595|PHD finger protein 8
mm9_v1_chrX_+_146981959_146981987	0.0984372	CRX.p2	NM_001102446|Alas2|11656|aminolevulinic acid synthase 2, erythroid	NM_009653|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK077610|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr12_-_88579550_88579681	0.0981154	CRX.p2	BC125331|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene	BC125333|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene	NM_027744|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene	AK017096|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene
mm9_v1_chr4_+_140723459_140723541	0.0976763	CRX.p2	AK020135|Fbxo42|213499|F-box protein 42
mm9_v1_chr11_+_46553724_46553728	0.0976398	CRX.p2	NM_001166632|Havcr1|171283|hepatitis A virus cellular receptor 1	BC053400|Havcr1|171283|hepatitis A virus cellular receptor 1
mm9_v1_chr4_+_73329417_73329417	0.0973497	CRX.p2	AK139501|Gm428|242502|predicted gene 428	NM_001081644|Gm428|242502|predicted gene 428
mm9_v1_chr7_+_25862367_25862378	0.0959689	CRX.p2	BC054064|Zfp574|232976|zinc finger protein 574
mm9_v1_chr9_+_20692618_20692740	0.0958835	CRX.p2	NM_145610|Ppan|235036|peter pan homolog (Drosophila)	BC014688|Ppan|235036|peter pan homolog (Drosophila)	AK085695|Ppan|235036|peter pan homolog (Drosophila)	AK039027|Ppan|235036|peter pan homolog (Drosophila)	AK172615|Ppan|235036|peter pan homolog (Drosophila)	AK171672|Ppan|235036|peter pan homolog (Drosophila)	BC059277|Ppan|235036|peter pan homolog (Drosophila)
mm9_v1_chr11_+_77590766_77590794	0.0953681	CRX.p2	AB026497|Myo18a|360013|myosin XVIIIA	NM_011586|Myo18a|360013|myosin XVIIIA	BC138366|Myo18a|360013|myosin XVIIIA	BC145257|Myo18a|360013|myosin XVIIIA
mm9_v1_chr8_+_108232190_108232202	0.0939452	CRX.p2	AK016673|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	BC125412|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	BC138007|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	BC145093|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene	NM_027655|4933405L10Rik|71046|RIKEN cDNA 4933405L10 gene
mm9_v1_chr6_+_34813131_34813171	0.0935715	CRX.p2	AK030532|Tmem140|68487|transmembrane protein 140	AK165621|Tmem140|68487|transmembrane protein 140	NM_197986|Tmem140|68487|transmembrane protein 140	BC023802|Tmem140|68487|transmembrane protein 140
mm9_v1_chr14_-_58284047_58284093	0.0929967	CRX.p2	AK163516|Xpo4|57258|exportin 4
mm9_v1_chr1_-_196957694_196957780	0.092873	CRX.p2	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr11_+_58791616_58791669	0.0910701	CRX.p2	BC020102|Trim11|94091|tripartite motif-containing 11	AF220124|Trim11|94091|tripartite motif-containing 11	NM_053168|Trim11|94091|tripartite motif-containing 11	AK170656|Trim11|94091|tripartite motif-containing 11	AK051266|Trim11|94091|tripartite motif-containing 11
mm9_v1_chr11_+_3964839_3964931	0.0904961	CRX.p2	NM_001029937|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC138982|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC138985|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC145485|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)
mm9_v1_chr9_-_109190173_109190189	0.0900175	CRX.p2	BC099372|Fbxw14|50757|F-box and WD-40 domain protein 14	BC145098|Fbxw14|50757|F-box and WD-40 domain protein 14	AK135771|Fbxw14|50757|F-box and WD-40 domain protein 14	BC138018|Fbxw14|50757|F-box and WD-40 domain protein 14	AK135682|Fbxw14|50757|F-box and WD-40 domain protein 14	AK166611|Fbxw14|50757|F-box and WD-40 domain protein 14	AK166612|Fbxw14|50757|F-box and WD-40 domain protein 14	AK087709|Fbxw14|50757|F-box and WD-40 domain protein 14	NM_015793|Fbxw14|50757|F-box and WD-40 domain protein 14
mm9_v1_chr9_+_75195564_75195697	0.0897804	CRX.p2	AK136172|Bcl2l10|12049|Bcl2-like 10	NM_013479|Bcl2l10|12049|Bcl2-like 10	BC052690|Bcl2l10|12049|Bcl2-like 10	AF067660|Bcl2l10|12049|Bcl2-like 10	AF102501|Bcl2l10|12049|Bcl2-like 10	AK145385|Bcl2l10|12049|Bcl2-like 10	AK162127|Bcl2l10|12049|Bcl2-like 10
mm9_v1_chr16_+_55966387_55966447	0.0895453	CRX.p2	NM_024218|Rpl24|68193|ribosomal protein L24
mm9_v1_chr5_-_123496828_123496828	0.0829387	CRX.p2	BC019987|Morn3|74890|MORN repeat containing 3	NM_029112|Morn3|74890|MORN repeat containing 3
mm9_v1_chrX_+_75614981_75614981	0.0828044	CRX.p2	AK015598|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116859|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	BC116861|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene	NM_001177966|4930480E11Rik|74910|RIKEN cDNA 4930480E11 gene
mm9_v1_chr8_-_74035629_74035657	0.0827489	CRX.p2	AF348403|Plvap|84094|plasmalemma vesicle associated protein	AF369900|Plvap|84094|plasmalemma vesicle associated protein
mm9_v1_chr19_-_12870612_12870615	0.0824075	CRX.p2	NM_053009|Zfp91|109910|zinc finger protein 91	AK147560|Zfp91|109910|zinc finger protein 91
mm9_v1_chr10_+_128184908_128185017	0.0807827	CRX.p2	NM_030100|Wibg|78428|within bgcn homolog (Drosophila)	AK020702|Wibg|78428|within bgcn homolog (Drosophila)	AJ459407|Wibg|78428|within bgcn homolog (Drosophila)
mm9_v1_chr7_+_56044379_56044458	0.0802262	CRX.p2	AK049640|Zdhhc13|243983|zinc finger, DHHC domain containing 13	AK146196|Zdhhc13|243983|zinc finger, DHHC domain containing 13	BC019493|Zdhhc13|243983|zinc finger, DHHC domain containing 13	BC046599|Zdhhc13|243983|zinc finger, DHHC domain containing 13	AK145855|Zdhhc13|243983|zinc finger, DHHC domain containing 13
mm9_v1_chr3_+_94914936_94915064	0.0799611	CRX.p2	BC043029|Vps72|21427|vacuolar protein sorting 72 (yeast)	NM_009336|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK140284|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK155191|Vps72|21427|vacuolar protein sorting 72 (yeast)	BC004834|Vps72|21427|vacuolar protein sorting 72 (yeast)	D43643|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK179387|Vps72|21427|vacuolar protein sorting 72 (yeast)
mm9_v1_chr19_-_44210311_44210378	0.0795277	CRX.p2	BC037640|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	BC027553|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK012163|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK139654|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	NM_001081077|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)
mm9_v1_chr2_+_153571990_153572007	0.0790646	CRX.p2	BC052405|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr11_-_70432695_70432695	0.0790007	CRX.p2	NM_009603|Chrne|11448|cholinergic receptor, nicotinic, epsilon polypeptide	X55718|Chrne|11448|cholinergic receptor, nicotinic, epsilon polypeptide
mm9_v1_chr11_-_69431369_69431406	0.0761223	CRX.p2	U85644|Shbg|20415|sex hormone binding globulin	BC120785|Shbg|20415|sex hormone binding globulin	BC120787|Shbg|20415|sex hormone binding globulin	AK010959|Shbg|20415|sex hormone binding globulin	NM_011367|Shbg|20415|sex hormone binding globulin
mm9_v1_chr19_-_8860725_8860906	0.0748265	CRX.p2	BC028647|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK144881|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	BC020299|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_146092|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK077149|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_001177798|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm9_v1_chr15_-_10400242_10400361	0.0740304	CRX.p2	AK140224|Dnajc21|78244|DnaJ (Hsp40) homolog, subfamily C, member 21	NM_030046|Dnajc21|78244|DnaJ (Hsp40) homolog, subfamily C, member 21
mm9_v1_chr12_+_101202708_101202902	0.0724983	CRX.p2	NM_001164426|Kcnk13|217826|potassium channel, subfamily K, member 13	NM_001164427|Kcnk13|217826|potassium channel, subfamily K, member 13	NM_146037|Kcnk13|217826|potassium channel, subfamily K, member 13	AK158645|Kcnk13|217826|potassium channel, subfamily K, member 13	AK155396|Kcnk13|217826|potassium channel, subfamily K, member 13	AK089394|Kcnk13|217826|potassium channel, subfamily K, member 13	AK134730|Kcnk13|217826|potassium channel, subfamily K, member 13	AK170504|Kcnk13|217826|potassium channel, subfamily K, member 13
mm9_v1_chr18_-_73914084_73914137	0.0724199	CRX.p2	BC019371|Elac1|114615|elaC homolog 1 (E. coli)	AF308697|Elac1|114615|elaC homolog 1 (E. coli)	NM_053255|Elac1|114615|elaC homolog 1 (E. coli)
mm9_v1_chr6_-_66509701_66509701	0.0720097	CRX.p2	AK029205|Vmn1r32|171188|vomeronasal 1 receptor 32	NM_134170|Vmn1r32|171188|vomeronasal 1 receptor 32
mm9_v1_chr11_+_78085325_78085440	0.0715445	CRX.p2	BC040464|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr17_-_37761577_37761577	0.0707742	CRX.p2	NM_146632|Olfr116|258625|olfactory receptor 116
mm9_v1_chr2_-_157172367_157172390	0.0703392	CRX.p2	BC068204|Ghrh|14601|growth hormone releasing hormone	AK005392|Ghrh|14601|growth hormone releasing hormone	AK018796|Ghrh|14601|growth hormone releasing hormone	AK018816|Ghrh|14601|growth hormone releasing hormone	NM_010285|Ghrh|14601|growth hormone releasing hormone
mm9_v1_chr2_+_61431102_61431246	0.0695156	CRX.p2	NM_001164071|Tank|21353|TRAF family member-associated Nf-kappa B activator	NM_001164072|Tank|21353|TRAF family member-associated Nf-kappa B activator	BC026148|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK031559|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK165420|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK088817|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK147727|Tank|21353|TRAF family member-associated Nf-kappa B activator	U51907|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK038910|Tank|21353|TRAF family member-associated Nf-kappa B activator	BC033282|Tank|21353|TRAF family member-associated Nf-kappa B activator	AK165994|Tank|21353|TRAF family member-associated Nf-kappa B activator
mm9_v1_chr19_-_5366600_5366664	0.0687953	CRX.p2	AB025349|Banf1|23825|barrier to autointegration factor 1	AK088896|Banf1|23825|barrier to autointegration factor 1	AK004212|Banf1|23825|barrier to autointegration factor 1	AK012588|Banf1|23825|barrier to autointegration factor 1	BC003709|Banf1|23825|barrier to autointegration factor 1	NM_011793|Banf1|23825|barrier to autointegration factor 1	AK003025|Banf1|23825|barrier to autointegration factor 1	AK011079|Banf1|23825|barrier to autointegration factor 1	AK011100|Banf1|23825|barrier to autointegration factor 1	AK168039|Banf1|23825|barrier to autointegration factor 1
mm9_v1_chr6_+_48689045_48689097	0.0686837	CRX.p2	NM_008376|Gimap1|16205|GTPase, IMAP family member 1	NM_175860|Gimap1|16205|GTPase, IMAP family member 1	AK156732|Gimap1|16205|GTPase, IMAP family member 1	BC132601|Gimap1|16205|GTPase, IMAP family member 1	BC132603|Gimap1|16205|GTPase, IMAP family member 1	AK169133|Gimap1|16205|GTPase, IMAP family member 1
mm9_v1_chr11_-_99212407_99212431	0.0678577	CRX.p2	AB013607|Krt27|16675|keratin 27	NM_010666|Krt27|16675|keratin 27	AK077384|Krt27|16675|keratin 27	BC140996|Krt27|16675|keratin 27	BC140997|Krt27|16675|keratin 27
mm9_v1_chr10_-_127444563_127444662	0.0671479	CRX.p2	BC021836|Hsd17b6|27400|hydroxysteroid (17-beta) dehydrogenase 6	NM_013786|Hsd17b6|27400|hydroxysteroid (17-beta) dehydrogenase 6	AK008212|Hsd17b6|27400|hydroxysteroid (17-beta) dehydrogenase 6
mm9_v1_chr11_+_116395281_116395465	0.0669846	CRX.p2	AK136289|Sphk1|20698|sphingosine kinase 1	AK197304|Sphk1|20698|sphingosine kinase 1
mm9_v1_chr12_+_88855265_88855265	0.0664273	CRX.p2	AK139584|Gm8300|666806|predicted gene 8300	NM_001177565|Gm8300|666806|predicted gene 8300
mm9_v1_chr18_+_37649118_37649272	0.0662469	CRX.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr15_-_76038682_76038682	0.0651154	CRX.p2	AF188023|Plec|18810|plectin	AY480037|Plec|18810|plectin	NM_001164203|Plec|18810|plectin	NM_201388|Plec|18810|plectin
mm9_v1_chr5_+_23900197_23900242	0.0640228	CRX.p2	AK014688|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK076315|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK049152|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK166704|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK170334|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK014319|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK030624|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK038760|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm9_v1_chr15_+_101114702_101114762	0.0630838	CRX.p2	AK160336|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene	AK007505|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene	AK134253|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene	AK150298|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene	AK151381|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene	AK167951|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene	NM_026566|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene	BC016463|9430023L20Rik|68118|RIKEN cDNA 9430023L20 gene
mm9_v1_chr1_-_167523348_167523717	0.0630759	CRX.p2	AK188720|Mpzl1|68481|myelin protein zero-like 1	AK198363|Mpzl1|68481|myelin protein zero-like 1	AK200888|Mpzl1|68481|myelin protein zero-like 1	AK206772|Mpzl1|68481|myelin protein zero-like 1	AK210071|Mpzl1|68481|myelin protein zero-like 1	AK214871|Mpzl1|68481|myelin protein zero-like 1	AK215062|Mpzl1|68481|myelin protein zero-like 1	AK218959|Mpzl1|68481|myelin protein zero-like 1	AK003513|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr7_-_109069245_109069287	0.0629249	CRX.p2	EU627089|Lrrc51|69358|leucine rich repeat containing 51	EU627090|Lrrc51|69358|leucine rich repeat containing 51	NM_001162974|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr19_+_8967475_8967547	0.0627303	CRX.p2	NM_176843|Ints5|109077|integrator complex subunit 5	BC039214|Ints5|109077|integrator complex subunit 5	AK144770|Ints5|109077|integrator complex subunit 5	AK166149|Ints5|109077|integrator complex subunit 5	AK168795|Ints5|109077|integrator complex subunit 5	AK143868|Ints5|109077|integrator complex subunit 5	AK155499|Ints5|109077|integrator complex subunit 5	AK170584|Ints5|109077|integrator complex subunit 5	AK172260|Ints5|109077|integrator complex subunit 5
mm9_v1_chr9_+_106402297_106402322	0.0624891	CRX.p2	NM_001146701|Iqcf1|74267|IQ motif containing F1	NM_028843|Iqcf1|74267|IQ motif containing F1	BC049769|Iqcf1|74267|IQ motif containing F1	AK006797|Iqcf1|74267|IQ motif containing F1
mm9_v1_chr14_+_34767188_34767245	0.0612501	CRX.p2	BC083133|Rbp3|19661|retinol binding protein 3, interstitial	BC017610|Rbp3|19661|retinol binding protein 3, interstitial	NM_015745|Rbp3|19661|retinol binding protein 3, interstitial	BC040282|Rbp3|19661|retinol binding protein 3, interstitial	BC042480|Rbp3|19661|retinol binding protein 3, interstitial
mm9_v1_chr7_-_29551532_29551548	0.0611441	CRX.p2	AY176059|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AK038631|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	NM_010908|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
mm9_v1_chr5_-_94100392_94100534	0.0602478	CRX.p2	BC085232|C87414|381654|expressed sequence C87414	AK163343|C87414|381654|expressed sequence C87414	NM_001164284|C87414|381654|expressed sequence C87414	NM_001164285|C87414|381654|expressed sequence C87414	AK139835|C87414|381654|expressed sequence C87414
mm9_v1_chr10_+_62562532_62562550	0.0591004	CRX.p2	BC092234|Atoh7|53404|atonal homolog 7 (Drosophila)
mm9_v1_chr3_-_87862384_87862439	0.0588424	CRX.p2	BC058362|Apoa1bp|246703|apolipoprotein A-I binding protein	AJ344092|Apoa1bp|246703|apolipoprotein A-I binding protein	AY566271|Apoa1bp|246703|apolipoprotein A-I binding protein	NM_144897|Apoa1bp|246703|apolipoprotein A-I binding protein	AK159846|Apoa1bp|246703|apolipoprotein A-I binding protein
mm9_v1_chr11_+_20124648_20124793	0.056903	CRX.p2	AK207850|Rab1|19324|RAB1, member RAS oncogene family	AK215283|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr8_+_74213150_74213152	0.0544753	CRX.p2	AK132857|Insl3|16336|insulin-like 3	BC049540|Insl3|16336|insulin-like 3	NM_013564|Insl3|16336|insulin-like 3	S82815|Insl3|16336|insulin-like 3
mm9_v1_chr8_+_97056910_97056982	0.053679	CRX.p2	BC031801|Cpne2|234577|copine II	NM_153507|Cpne2|234577|copine II	AK160238|Cpne2|234577|copine II	AK086165|Cpne2|234577|copine II	BC022128|Cpne2|234577|copine II
mm9_v1_chr1_-_164796660_164796743	0.05286	CRX.p2	BC011229|Fmo1|14261|flavin containing monooxygenase 1	NM_010231|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr5_+_24687277_24687437	0.0528176	CRX.p2	AK005605|Galntl5|67909|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AK016415|Galntl5|67909|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	NM_026449|Galntl5|67909|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	BC049554|Galntl5|67909|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	AK006193|Galntl5|67909|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	BC100447|Galntl5|67909|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	BC145757|Galntl5|67909|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5
mm9_v1_chr2_+_125691964_125692075	0.0511922	CRX.p2	AK171939|Galk2|69976|galactokinase 2	BC079843|Galk2|69976|galactokinase 2	AK053002|Galk2|69976|galactokinase 2	AK154762|Galk2|69976|galactokinase 2	AK176923|Galk2|69976|galactokinase 2	AK209145|Galk2|69976|galactokinase 2
mm9_v1_chr8_+_26750755_26750755	0.0511007	CRX.p2	NM_001081269|Whsc1l1|234135|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm9_v1_chr15_+_75098850_75098850	0.0501908	CRX.p2	NM_008530|Ly6f|17071|lymphocyte antigen 6 complex, locus F
mm9_v1_chr2_+_144353506_144353513	0.0500542	CRX.p2	AK013084|Polr3f|70408|polymerase (RNA) III (DNA directed) polypeptide F
mm9_v1_chr17_-_6860516_6860655	0.0492138	CRX.p2	EF110999|Dynlt1c|100040563|dynein light chain Tctex-type 1C	M25825|Dynlt1b|21648|dynein light chain Tctex-type 1D	AK005569|Dynlt1f|100040531|dynein light chain Tctex-type 1F	AK168478|Dynlt1c|100040563|dynein light chain Tctex-type 1C	NM_001166630|Dynlt1c|100040563|dynein light chain Tctex-type 1C	NM_001166627|Dynlt1f|100040531|dynein light chain Tctex-type 1F
mm9_v1_chr8_-_75091078_75091201	0.0467691	CRX.p2	
mm9_v1_chrX_-_30292985_30293030	0.0462209	CRX.p2	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr7_+_31561419_31561442	0.0458267	CRX.p2	AK003695|Dmkn|73712|dermokine	AY444558|Dmkn|73712|dermokine	NM_028618|Dmkn|73712|dermokine	AY622962|Dmkn|73712|dermokine
mm9_v1_chr8_+_113370907_113370999	0.0453544	CRX.p2	NM_133973|Cog4|102339|component of oligomeric golgi complex 4	AK090225|Cog4|102339|component of oligomeric golgi complex 4	AK156466|Cog4|102339|component of oligomeric golgi complex 4	AK172465|Cog4|102339|component of oligomeric golgi complex 4	BC023120|Cog4|102339|component of oligomeric golgi complex 4	AK182269|Cog4|102339|component of oligomeric golgi complex 4
mm9_v1_chr19_-_11271212_11271226	0.0444874	CRX.p2	BC089483|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13	NM_198224|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13	AF544402|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13	AK006841|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13
mm9_v1_chr8_+_47060860_47060925	0.0433637	CRX.p2	AK078309|Ufsp2|192169|UFM1-specific peptidase 2	AK075795|Ufsp2|192169|UFM1-specific peptidase 2	AK160164|Ufsp2|192169|UFM1-specific peptidase 2	BC005503|Ufsp2|192169|UFM1-specific peptidase 2	NM_138668|Ufsp2|192169|UFM1-specific peptidase 2
mm9_v1_chr9_+_44446796_44446798	0.0415018	CRX.p2	AK156303|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr4_+_142984330_142984343	0.0412361	CRX.p2	AF285578|Pramel1|83491|preferentially expressed antigen in melanoma-like 1	BC131995|Pramel1|83491|preferentially expressed antigen in melanoma-like 1	BC132399|Pramel1|83491|preferentially expressed antigen in melanoma-like 1	NM_031377|Pramel1|83491|preferentially expressed antigen in melanoma-like 1
mm9_v1_chr1_+_85196183_85196282	0.0405514	CRX.p2	AK156961|Csprs|114564|component of Sp100-rs	NM_001081746|Gm7609|665378|predicted pseudogene 7609	X82357|Csprs|114564|component of Sp100-rs	BC059276|Gm7609|665378|predicted pseudogene 7609
mm9_v1_chrX_+_63906333_63906333	0.0399842	CRX.p2	BC111888|Slitrk2|245450|SLIT and NTRK-like family, member 2	BC112406|Slitrk2|245450|SLIT and NTRK-like family, member 2	NM_198863|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr3_+_107895985_107896200	0.0391992	CRX.p2	BC016272|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	NM_008141|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131941|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131943|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC085102|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	L10666|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	AK009388|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2
mm9_v1_chr2_+_119456102_119456195	0.038375	CRX.p2	BC009096|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr15_-_74942109_74942378	0.0376114	CRX.p2	M18466|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	D86232|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	BC092082|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	NM_001099217|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2
mm9_v1_chr17_+_18561067_18561067	0.037161	CRX.p2	NM_001102581|Vmn2r95|328759|vomeronasal 2, receptor 95
mm9_v1_chr8_-_125842456_125842475	0.0371095	CRX.p2	AK082847|Fanca|14087|Fanconi anemia, complementation group A	AK084990|Fanca|14087|Fanconi anemia, complementation group A	AK166112|Fanca|14087|Fanconi anemia, complementation group A	AF208122|Fanca|14087|Fanconi anemia, complementation group A	AF178934|Fanca|14087|Fanconi anemia, complementation group A	BC150705|Fanca|14087|Fanconi anemia, complementation group A	AF208116|Fanca|14087|Fanconi anemia, complementation group A	AF208118|Fanca|14087|Fanconi anemia, complementation group A	NM_016925|Fanca|14087|Fanconi anemia, complementation group A
mm9_v1_chrX_+_110411860_110411875	0.0367518	CRX.p2	AK045154|Dach2|93837|dachshund 2 (Drosophila)	NM_001142570|Dach2|93837|dachshund 2 (Drosophila)	NM_033605|Dach2|93837|dachshund 2 (Drosophila)	AF257217|Dach2|93837|dachshund 2 (Drosophila)	BC059233|Dach2|93837|dachshund 2 (Drosophila)
mm9_v1_chr9_+_27204405_27204405	0.0367291	CRX.p2	AB120716|Spata19|75469|spermatogenesis associated 19	AK005610|Spata19|75469|spermatogenesis associated 19	NM_029299|Spata19|75469|spermatogenesis associated 19
mm9_v1_chr7_-_16457733_16457733	0.0361672	CRX.p2	AK139691|Crx|12951|cone-rod homeobox containing gene	NM_001113330|Crx|12951|cone-rod homeobox containing gene
mm9_v1_chr14_+_26761977_26762068	0.035875	CRX.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_26901730_26901821	0.035875	CRX.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_27041341_27041432	0.035875	CRX.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr7_-_20218888_20218906	0.0358611	CRX.p2	
mm9_v1_chr10_+_127452219_127452252	0.0345455	CRX.p2	J04620|Prim1|19075|DNA primase, p49 subunit	BC089544|Prim1|19075|DNA primase, p49 subunit	AK089063|Prim1|19075|DNA primase, p49 subunit	AK088557|Prim1|19075|DNA primase, p49 subunit	AK160831|Prim1|19075|DNA primase, p49 subunit
mm9_v1_chr1_-_164796609_164796656	0.0343706	CRX.p2	U87456|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr9_+_110235922_110235986	0.0325592	CRX.p2	AK035432|Scap|235623|SREBF chaperone
mm9_v1_chr19_+_56536126_56536129	0.0321856	CRX.p2	NM_001164263|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	NM_172641|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK036908|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK053921|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr4_+_153385839_153386102	0.0300757	CRX.p2	BC138462|Lrrc47|72946|leucine rich repeat containing 47	BC138463|Lrrc47|72946|leucine rich repeat containing 47	AK154897|Lrrc47|72946|leucine rich repeat containing 47	NM_201226|Lrrc47|72946|leucine rich repeat containing 47	BC094573|Lrrc47|72946|leucine rich repeat containing 47	AK129306|Lrrc47|72946|leucine rich repeat containing 47
mm9_v1_chr13_+_54167169_54167276	0.0277097	CRX.p2	AK012650|Sfxn1|14057|sideroflexin 1	NM_027324|Sfxn1|14057|sideroflexin 1	AF325260|Sfxn1|14057|sideroflexin 1	BC005743|Sfxn1|14057|sideroflexin 1	AK151110|Sfxn1|14057|sideroflexin 1
mm9_v1_chr15_+_80778910_80778973	0.0276634	CRX.p2	AK171725|Adsl|11564|adenylosuccinate lyase	BC020187|Adsl|11564|adenylosuccinate lyase	U20225|Adsl|11564|adenylosuccinate lyase	AK049372|Adsl|11564|adenylosuccinate lyase	AK051111|Adsl|11564|adenylosuccinate lyase	AK152092|Adsl|11564|adenylosuccinate lyase	NM_009634|Adsl|11564|adenylosuccinate lyase	AK166019|Adsl|11564|adenylosuccinate lyase	AK168906|Adsl|11564|adenylosuccinate lyase	AK170216|Adsl|11564|adenylosuccinate lyase
mm9_v1_chr1_+_79772592_79772632	0.0271639	CRX.p2	NM_001081210|Mrpl44|69163|mitochondrial ribosomal protein L44
mm9_v1_chr17_-_35971652_35971809	0.026028	CRX.p2	AK080778|Tubb5|22154|tubulin, beta 5	AK088137|Tubb5|22154|tubulin, beta 5
mm9_v1_chrX_+_149216463_149216622	0.0247732	CRX.p2	NM_010951|Gpr143|18241|G protein-coupled receptor 143	U63918|Gpr143|18241|G protein-coupled receptor 143	BC119384|Gpr143|18241|G protein-coupled receptor 143	BC137813|Gpr143|18241|G protein-coupled receptor 143	AK033060|Gpr143|18241|G protein-coupled receptor 143
mm9_v1_chr15_-_78226314_78226341	0.024508	CRX.p2	AK006856|1700061J05Rik|73376|RIKEN cDNA 1700061J05 gene	BC100472|1700061J05Rik|73376|RIKEN cDNA 1700061J05 gene	NM_001163612|1700061J05Rik|73376|RIKEN cDNA 1700061J05 gene	NM_028522|1700061J05Rik|73376|RIKEN cDNA 1700061J05 gene
mm9_v1_chr10_+_75911825_75911888	0.023987	CRX.p2	NM_029816|2610028H24Rik|76964|RIKEN cDNA 2610028H24 gene	AK011591|2610028H24Rik|76964|RIKEN cDNA 2610028H24 gene	BC051454|2610028H24Rik|76964|RIKEN cDNA 2610028H24 gene
mm9_v1_chr7_-_27179256_27179261	0.0227093	CRX.p2	AY360472|Nlrp9c|330490|NLR family, pyrin domain containing 9C	AY596203|Nlrp9c|330490|NLR family, pyrin domain containing 9C	NM_001042612|Nlrp9c|330490|NLR family, pyrin domain containing 9C
mm9_v1_chr10_-_70386552_70386556	0.0222835	CRX.p2	AK082289|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr8_-_28339053_28339060	0.0219717	CRX.p2	AK143775|Adrb3|11556|adrenergic receptor, beta 3
mm9_v1_chr7_+_56044372_56044374	0.0213088	CRX.p2	AK010382|Zdhhc13|243983|zinc finger, DHHC domain containing 13	NM_028031|Zdhhc13|243983|zinc finger, DHHC domain containing 13
mm9_v1_chr15_-_102455844_102455918	0.0196003	CRX.p2	BC026483|Atf7|223922|activating transcription factor 7	NM_146065|Atf7|223922|activating transcription factor 7	AK155444|Atf7|223922|activating transcription factor 7	AK157628|Atf7|223922|activating transcription factor 7	AK164412|Atf7|223922|activating transcription factor 7
mm9_v1_chr4_-_43023359_43023400	0.019412	CRX.p2	BC050890|Fancg|60534|Fanconi anemia, complementation group G
mm9_v1_chrX_-_7829333_7829537	0.0177786	CRX.p2	AK150251|Ftsj1|54632|FtsJ homolog 1 (E. coli)	BC034880|Ftsj1|54632|FtsJ homolog 1 (E. coli)	BC011144|Ftsj1|54632|FtsJ homolog 1 (E. coli)	AK004357|Ftsj1|54632|FtsJ homolog 1 (E. coli)	AK036313|Ftsj1|54632|FtsJ homolog 1 (E. coli)	NM_133991|Ftsj1|54632|FtsJ homolog 1 (E. coli)
mm9_v1_chr11_+_52209908_52210075	0.0169429	CRX.p2	AK079269|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	NM_153117|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK150517|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	BC034829|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK145254|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK154955|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK012310|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK135934|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK144677|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK147956|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK195954|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	AK007314|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene	BC006957|9530068E07Rik|213673|RIKEN cDNA 9530068E07 gene
mm9_v1_chr4_-_116828657_116828766	0.0166987	CRX.p2	BC051446|Rps8|20116|ribosomal protein S8	AK010306|Rps8|20116|ribosomal protein S8	AK011642|Rps8|20116|ribosomal protein S8	AK009023|Rps8|20116|ribosomal protein S8	AK011058|Rps8|20116|ribosomal protein S8	AK012435|Rps8|20116|ribosomal protein S8	AK012562|Rps8|20116|ribosomal protein S8	AK019223|Rps8|20116|ribosomal protein S8	AK088660|Rps8|20116|ribosomal protein S8	AK145478|Rps8|20116|ribosomal protein S8	AK146303|Rps8|20116|ribosomal protein S8	AK146806|Rps8|20116|ribosomal protein S8	AK151544|Rps8|20116|ribosomal protein S8	AK166848|Rps8|20116|ribosomal protein S8	AK168609|Rps8|20116|ribosomal protein S8	BC086899|Rps8|20116|ribosomal protein S8	BC100594|Rps8|20116|ribosomal protein S8	BC081464|Rps8|20116|ribosomal protein S8	AK011048|Rps8|20116|ribosomal protein S8	AK012665|Rps8|20116|ribosomal protein S8	AK010650|Rps8|20116|ribosomal protein S8	NM_009098|Rps8|20116|ribosomal protein S8
mm9_v1_chr6_+_122503826_122503835	0.0163008	CRX.p2	NM_009645|Aicda|11628|activation-induced cytidine deaminase	AF132979|Aicda|11628|activation-induced cytidine deaminase
mm9_v1_chr14_+_41918624_41918669	0.0153985	CRX.p2	AK153832|Mat1a|11720|methionine adenosyltransferase I, alpha	AK149542|Mat1a|11720|methionine adenosyltransferase I, alpha	L13622|Mat1a|11720|methionine adenosyltransferase I, alpha	BC011211|Mat1a|11720|methionine adenosyltransferase I, alpha	NM_133653|Mat1a|11720|methionine adenosyltransferase I, alpha
mm9_v1_chr16_-_38341927_38341945	0.014997	CRX.p2	AK077038|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene	NM_001081025|4932425I24Rik|320214|RIKEN cDNA 4932425I24 gene
mm9_v1_chr18_+_31963675_31963753	0.0148382	CRX.p2	BC019463|Wdr33|74320|WD repeat domain 33	NM_001170966|Wdr33|74320|WD repeat domain 33	NM_001170967|Wdr33|74320|WD repeat domain 33	NM_001170970|Wdr33|74320|WD repeat domain 33	NM_028866|Wdr33|74320|WD repeat domain 33	AK003256|Wdr33|74320|WD repeat domain 33	AK018408|Wdr33|74320|WD repeat domain 33	AK078286|Wdr33|74320|WD repeat domain 33	AK009297|Wdr33|74320|WD repeat domain 33	AK045125|Wdr33|74320|WD repeat domain 33	AK045923|Wdr33|74320|WD repeat domain 33	AK050653|Wdr33|74320|WD repeat domain 33	AK161982|Wdr33|74320|WD repeat domain 33
mm9_v1_chr13_-_4608352_4608430	0.0144888	CRX.p2	U68535|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK002507|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK007924|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK028605|Akr1e1|56043|aldo-keto reductase family 1, member E1	BC012692|Akr1e1|56043|aldo-keto reductase family 1, member E1	NM_018859|Akr1e1|56043|aldo-keto reductase family 1, member E1
mm9_v1_chr5_+_31552275_31552343	0.0141801	CRX.p2	AK215481|Nrbp1|192292|nuclear receptor binding protein 1	AK182568|Nrbp1|192292|nuclear receptor binding protein 1	AK185308|Nrbp1|192292|nuclear receptor binding protein 1	AK196002|Nrbp1|192292|nuclear receptor binding protein 1	AK219460|Nrbp1|192292|nuclear receptor binding protein 1
mm9_v1_chr6_+_136903029_136903071	0.0140193	CRX.p2	AK080696|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	AK020922|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	NM_023898|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC058192|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC115671|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC115672|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC057290|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm9_v1_chr3_+_82859422_82859482	0.0134582	CRX.p2	AK080068|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK077197|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	NM_016784|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK075993|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK076007|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr15_-_103045710_103045798	0.0115843	CRX.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr2_-_164410650_164410676	0.00668406	CRX.p2	BC147597|Wfdc6a|209351|WAP four-disulfide core domain 6A	BC147615|Wfdc6a|209351|WAP four-disulfide core domain 6A	AK136589|Wfdc6a|209351|WAP four-disulfide core domain 6A	NM_001177848|Wfdc6a|209351|WAP four-disulfide core domain 6A
mm9_v1_chr6_-_130015247_130015411	0.00629804	CRX.p2	AY860975|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	AY860973|Klra33|654450|killer cell lectin-like receptor subfamily A member 33	L78247|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	NM_001039118|Klra33|654450|killer cell lectin-like receptor subfamily A member 33	AY971805|Klra18|93970|killer cell lectin-like receptor, subfamily A, member 18	AK145141|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	AF218078|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	AF218079|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	BC141242|Klra18|93970|killer cell lectin-like receptor, subfamily A, member 18
mm9_v1_chr16_+_55966458_55966533	0.00624742	CRX.p2	AK028209|Rpl24|68193|ribosomal protein L24	AK018731|Rpl24|68193|ribosomal protein L24	AK136631|Rpl24|68193|ribosomal protein L24	AK019214|Rpl24|68193|ribosomal protein L24	AK077617|Rpl24|68193|ribosomal protein L24	BC053377|Rpl24|68193|ribosomal protein L24	BC058114|Rpl24|68193|ribosomal protein L24	BC092008|Rpl24|68193|ribosomal protein L24	BC002110|Rpl24|68193|ribosomal protein L24
mm9_v1_chr2_+_164439199_164439221	0.00527269	CRX.p2	AY541526|Wfdc6b|433502|WAP four-disulfide core domain 6B	NM_001012725|Wfdc6b|433502|WAP four-disulfide core domain 6B	BC141216|Wfdc6b|433502|WAP four-disulfide core domain 6B
mm9_v1_chr11_-_35647952_35648029	0.00418479	CRX.p2	BC020132|Rars|104458|arginyl-tRNA synthetase	AK076160|Rars|104458|arginyl-tRNA synthetase	AK149856|Rars|104458|arginyl-tRNA synthetase	AK152108|Rars|104458|arginyl-tRNA synthetase	AK160216|Rars|104458|arginyl-tRNA synthetase	AK166097|Rars|104458|arginyl-tRNA synthetase	AK168194|Rars|104458|arginyl-tRNA synthetase	AK011383|Rars|104458|arginyl-tRNA synthetase	NM_025936|Rars|104458|arginyl-tRNA synthetase
mm9_v1_chr1_-_130313846_130314003	0.00375634	CRX.p2	AK169716|Dars|226414|aspartyl-tRNA synthetase	BC008638|Dars|226414|aspartyl-tRNA synthetase	AK152562|Dars|226414|aspartyl-tRNA synthetase	AK153299|Dars|226414|aspartyl-tRNA synthetase	AK151897|Dars|226414|aspartyl-tRNA synthetase	AK152304|Dars|226414|aspartyl-tRNA synthetase	AK153256|Dars|226414|aspartyl-tRNA synthetase	AK166009|Dars|226414|aspartyl-tRNA synthetase	AK169247|Dars|226414|aspartyl-tRNA synthetase	AK077533|Dars|226414|aspartyl-tRNA synthetase	AK146350|Dars|226414|aspartyl-tRNA synthetase	AK151027|Dars|226414|aspartyl-tRNA synthetase	AK144470|Dars|226414|aspartyl-tRNA synthetase	AK077820|Dars|226414|aspartyl-tRNA synthetase	NM_145507|Dars|226414|aspartyl-tRNA synthetase	NM_177445|Dars|226414|aspartyl-tRNA synthetase
mm9_v1_chr4_-_63094355_63094355	0.00372464	CRX.p2	AY739121|Whrn|73750|whirlin	AY739122|Whrn|73750|whirlin	NM_001008797|Whrn|73750|whirlin	NM_001008798|Whrn|73750|whirlin
mm9_v1_chrX_+_62300818_62300824	0.00353834	CRX.p2	AK006526|Ctag2|70062|cancer/testis antigen 2	NM_027302|Ctag2|70062|cancer/testis antigen 2	BC049681|Ctag2|70062|cancer/testis antigen 2
mm9_v1_chr6_-_23605087_23605135	0.00192	CRX.p2	AY155440|Rnf148|71300|ring finger protein 148	AK017027|Rnf148|71300|ring finger protein 148	NM_027754|Rnf148|71300|ring finger protein 148
mm9_v1_chr7_+_31338319_31338323	0.00187519	CRX.p2	BC089621|Hspb6|243912|heat shock protein, alpha-crystallin-related, B6	NM_001012401|Hspb6|243912|heat shock protein, alpha-crystallin-related, B6
mm9_v1_chr15_+_76210904_76210993	0.00177242	CRX.p2	AK036810|Heatr7a|223658|HEAT repeat containing 7A	NM_175457|Heatr7a|223658|HEAT repeat containing 7A	AK170702|Heatr7a|223658|HEAT repeat containing 7A	AK090131|Heatr7a|223658|HEAT repeat containing 7A	AK147808|Heatr7a|223658|HEAT repeat containing 7A	AK147897|Heatr7a|223658|HEAT repeat containing 7A	AK038863|Heatr7a|223658|HEAT repeat containing 7A	AK052153|Heatr7a|223658|HEAT repeat containing 7A
mm9_v1_chr6_+_24478143_24478211	0.00169375	CRX.p2	AF403043|Asb15|78910|ankyrin repeat and SOCS box-containing 15	AK019556|Asb15|78910|ankyrin repeat and SOCS box-containing 15	NM_080847|Asb15|78910|ankyrin repeat and SOCS box-containing 15	BC050794|Asb15|78910|ankyrin repeat and SOCS box-containing 15	AK029759|Asb15|78910|ankyrin repeat and SOCS box-containing 15
mm9_v1_chr9_+_50425460_50425487	0.000383584	CRX.p2	BC019481|Pih1d2|72614|PIH1 domain containing 2
