mm9_v1_chr4_-_63681749_63681759	24.9578	CUUUGGU	BC117979|Tnc|21923|tenascin C	BC117980|Tnc|21923|tenascin C	NM_011607|Tnc|21923|tenascin C	X56304|Tnc|21923|tenascin C
mm9_v1_chr16_+_24393435_24393655	24.2574	CUUUGGU	NM_178665|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK168431|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK085626|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051345|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045288|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045341|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051937|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK086307|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK169780|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr16_+_24721940_24721951	24.1437	CUUUGGU	AK029567|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	NM_001145954|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK076989|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr12_+_8778201_8778241	19.9785	CUUUGGU	NM_011519|Sdc1|20969|syndecan 1	BC010560|Sdc1|20969|syndecan 1	X15487|Sdc1|20969|syndecan 1	AK162092|Sdc1|20969|syndecan 1	AK132491|Sdc1|20969|syndecan 1
mm9_v1_chr3_+_108926062_108926088	19.4368	CUUUGGU	AK032806|Slc25a24|229731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	NM_172685|Slc25a24|229731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	AK146034|Slc25a24|229731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	AK170598|Slc25a24|229731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	AK167778|Slc25a24|229731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	AK168090|Slc25a24|229731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	BC055369|Slc25a24|229731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24
mm9_v1_chr16_+_24448176_24448242	18.8704	CUUUGGU	AK054550|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	NM_001145952|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	BC085321|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr14_-_55196138_55196410	18.6376	CUUUGGU	BC011035|Jub|16475|ajuba	NM_010590|Jub|16475|ajuba	U79776|Jub|16475|ajuba
mm9_v1_chr16_+_30065419_30065442	18.4639	CUUUGGU	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr9_-_85220730_85220905	18.4008	CUUUGGU	NM_001160378|Fam46a|212943|family with sequence similarity 46, member A	AK135132|Fam46a|212943|family with sequence similarity 46, member A	NM_001160379|Fam46a|212943|family with sequence similarity 46, member A
mm9_v1_chr11_+_75465651_75465651	18.1795	CUUUGGU	AK166638|Myo1c|17913|myosin IC	NM_001080774|Myo1c|17913|myosin IC
mm9_v1_chr8_+_28196312_28196323	18.1638	CUUUGGU	AF378759|Gpr124|78560|G protein-coupled receptor 124	NM_054044|Gpr124|78560|G protein-coupled receptor 124	BC138451|Gpr124|78560|G protein-coupled receptor 124	BC138452|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr11_+_75465000_75465105	17.9955	CUUUGGU	NM_008659|Myo1c|17913|myosin IC	AK155530|Myo1c|17913|myosin IC	X99638|Myo1c|17913|myosin IC	BC021481|Myo1c|17913|myosin IC	AK004743|Myo1c|17913|myosin IC
mm9_v1_chr10_-_70622370_70622639	17.44	CUUUGGU	AF319464|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	BC111523|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	NM_031397|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	AK076154|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr16_-_85901362_85901374	17.2139	CUUUGGU	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr10_-_76629208_76629297	17.1348	CUUUGGU	L16898|Col18a1|12822|collagen, type XVIII, alpha 1	BC062931|Col18a1|12822|collagen, type XVIII, alpha 1	BC066080|Col18a1|12822|collagen, type XVIII, alpha 1	BC064817|Col18a1|12822|collagen, type XVIII, alpha 1	AK031798|Col18a1|12822|collagen, type XVIII, alpha 1	NM_009929|Col18a1|12822|collagen, type XVIII, alpha 1	U11636|Col18a1|12822|collagen, type XVIII, alpha 1
mm9_v1_chr10_-_76576422_76576449	17.092	CUUUGGU	U11637|Col18a1|12822|collagen, type XVIII, alpha 1	BC043697|Col18a1|12822|collagen, type XVIII, alpha 1	NM_001109991|Col18a1|12822|collagen, type XVIII, alpha 1
mm9_v1_chr7_-_125635435_125635488	16.2136	CUUUGGU	AK134593|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK137678|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	NM_001033380|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chr9_-_8004559_8004652	16.0064	CUUUGGU	BC094313|Yap1|22601|yes-associated protein 1	BC014733|Yap1|22601|yes-associated protein 1	X80508|Yap1|22601|yes-associated protein 1	AK157234|Yap1|22601|yes-associated protein 1	NM_001171147|Yap1|22601|yes-associated protein 1	NM_009534|Yap1|22601|yes-associated protein 1
mm9_v1_chr10_+_43198945_43198945	15.9543	CUUUGGU	BC060240|Bend3|331623|BEN domain containing 3	NM_199028|Bend3|331623|BEN domain containing 3
mm9_v1_chr8_+_108583449_108583790	15.3784	CUUUGGU	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr11_-_7113899_7113931	15.268	CUUUGGU	BC031421|Igfbp3|16009|insulin-like growth factor binding protein 3	BC058261|Igfbp3|16009|insulin-like growth factor binding protein 3	NM_008343|Igfbp3|16009|insulin-like growth factor binding protein 3
mm9_v1_chr11_+_75469516_75469674	15.2493	CUUUGGU	AK171107|Myo1c|17913|myosin IC	NM_001080775|Myo1c|17913|myosin IC	AK154294|Myo1c|17913|myosin IC	AK165680|Myo1c|17913|myosin IC	AY007255|Myo1c|17913|myosin IC
mm9_v1_chr11_-_106128935_106128945	15.186	CUUUGGU	BC005732|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	NM_031878|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm9_v1_chr17_-_25097542_25097636	15.0524	CUUUGGU	AK167223|Hn1l|52009|hematological and neurological expressed 1-like	BC057024|Hn1l|52009|hematological and neurological expressed 1-like	NM_198937|Hn1l|52009|hematological and neurological expressed 1-like	AK150226|Hn1l|52009|hematological and neurological expressed 1-like	AK152573|Hn1l|52009|hematological and neurological expressed 1-like	AK166213|Hn1l|52009|hematological and neurological expressed 1-like	AK152133|Hn1l|52009|hematological and neurological expressed 1-like	BC080740|Hn1l|52009|hematological and neurological expressed 1-like	AK169647|Hn1l|52009|hematological and neurological expressed 1-like
mm9_v1_chr1_-_13579885_13579986	14.267	CUUUGGU	AK168708|Tram1|72265|translocating chain-associating membrane protein 1	AK151240|Tram1|72265|translocating chain-associating membrane protein 1	AK152343|Tram1|72265|translocating chain-associating membrane protein 1	AK152991|Tram1|72265|translocating chain-associating membrane protein 1	AK150777|Tram1|72265|translocating chain-associating membrane protein 1	BC012401|Tram1|72265|translocating chain-associating membrane protein 1	AK145291|Tram1|72265|translocating chain-associating membrane protein 1	AK146207|Tram1|72265|translocating chain-associating membrane protein 1	AK088814|Tram1|72265|translocating chain-associating membrane protein 1	AK142658|Tram1|72265|translocating chain-associating membrane protein 1	AK155905|Tram1|72265|translocating chain-associating membrane protein 1	AK159203|Tram1|72265|translocating chain-associating membrane protein 1	AK159350|Tram1|72265|translocating chain-associating membrane protein 1	NM_028173|Tram1|72265|translocating chain-associating membrane protein 1	AK150551|Tram1|72265|translocating chain-associating membrane protein 1	AK151409|Tram1|72265|translocating chain-associating membrane protein 1	AK151664|Tram1|72265|translocating chain-associating membrane protein 1	AK152338|Tram1|72265|translocating chain-associating membrane protein 1	AK153379|Tram1|72265|translocating chain-associating membrane protein 1	AK028304|Tram1|72265|translocating chain-associating membrane protein 1	AK159878|Tram1|72265|translocating chain-associating membrane protein 1
mm9_v1_chr17_-_14831262_14831287	14.26	CUUUGGU	NM_011581|Thbs2|21826|thrombospondin 2
mm9_v1_chr7_-_151924382_151924447	14.2397	CUUUGGU	BC062959|Ano1|101772|anoctamin 1, calcium activated chloride channel	NM_178642|Ano1|101772|anoctamin 1, calcium activated chloride channel	AK052589|Ano1|101772|anoctamin 1, calcium activated chloride channel
mm9_v1_chr3_-_89084872_89084872	14.1588	CUUUGGU	AK079266|Efna1|13636|ephrin A1	NM_001162425|Efna1|13636|ephrin A1
mm9_v1_chr3_-_89083562_89083576	13.7269	CUUUGGU	AK009144|Efna1|13636|ephrin A1	NM_010107|Efna1|13636|ephrin A1
mm9_v1_chr14_+_79880952_79881000	13.6609	CUUUGGU	BC057134|Elf1|13709|E74-like factor 1	NM_007920|Elf1|13709|E74-like factor 1
mm9_v1_chr8_+_11312828_11312937	13.4469	CUUUGGU	AK053858|Col4a2|12827|collagen, type IV, alpha 2	NM_009932|Col4a2|12827|collagen, type IV, alpha 2	AK164096|Col4a2|12827|collagen, type IV, alpha 2	BC080789|Col4a2|12827|collagen, type IV, alpha 2	BC107685|Col4a2|12827|collagen, type IV, alpha 2
mm9_v1_chr12_+_30622876_30622919	13.224	CUUUGGU	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr16_+_37777075_37777220	13.1249	CUUUGGU	BC006185|Fstl1|14314|follistatin-like 1	AK049440|Fstl1|14314|follistatin-like 1	NM_008047|Fstl1|14314|follistatin-like 1	AK147117|Fstl1|14314|follistatin-like 1	BC028921|Fstl1|14314|follistatin-like 1	M91380|Fstl1|14314|follistatin-like 1
mm9_v1_chr5_+_93327023_93327086	13.1035	CUUUGGU	NM_001077596|Shroom3|27428|shroom family member 3	AK147493|Shroom3|27428|shroom family member 3
mm9_v1_chr8_+_109127245_109127278	13.086	CUUUGGU	AK076369|Cdh1|12550|cadherin 1	AK166267|Cdh1|12550|cadherin 1	NM_009864|Cdh1|12550|cadherin 1	BC098501|Cdh1|12550|cadherin 1
mm9_v1_chr11_-_101327431_101327547	13.025	CUUUGGU	BC085504|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159310|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC025496|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK170371|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC099678|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154965|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154178|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159315|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK160891|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK034795|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK155342|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	NM_012037|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK145193|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr12_+_71926429_71926675	12.9642	CUUUGGU	BC053929|Frmd6|319710|FERM domain containing 6	NM_028127|Frmd6|319710|FERM domain containing 6	AK054457|Frmd6|319710|FERM domain containing 6
mm9_v1_chr1_-_121318824_121318824	12.848	CUUUGGU	AK132352|Inhbb|16324|inhibin beta-B	NM_008381|Inhbb|16324|inhibin beta-B
mm9_v1_chr5_-_64360058_64360140	12.7134	CUUUGGU	AK133845|Rell1|100532|RELT-like 1	AK159944|Rell1|100532|RELT-like 1	AK161061|Rell1|100532|RELT-like 1	BC031198|Rell1|100532|RELT-like 1	BC066137|Rell1|100532|RELT-like 1	BC066160|Rell1|100532|RELT-like 1	AK140108|Rell1|100532|RELT-like 1	NM_145923|Rell1|100532|RELT-like 1
mm9_v1_chr2_-_125332107_125332185	12.584	CUUUGGU	U22493|Fbn1|14118|fibrillin 1	AK080935|Fbn1|14118|fibrillin 1	NM_007993|Fbn1|14118|fibrillin 1
mm9_v1_chr11_-_106134024_106134359	12.5825	CUUUGGU	AK166123|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	AK159259|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	NM_001130187|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm9_v1_chr7_+_19679892_19679978	12.485	CUUUGGU	NM_011383|Six5|20475|sine oculis-related homeobox 5 homolog (Drosophila)
mm9_v1_chr5_+_73305509_73305751	12.421	CUUUGGU	NM_001113423|Slain2|75991|SLAIN motif family, member 2	NM_153567|Slain2|75991|SLAIN motif family, member 2	AK146432|Slain2|75991|SLAIN motif family, member 2	AK129365|Slain2|75991|SLAIN motif family, member 2	BC010836|Slain2|75991|SLAIN motif family, member 2	AK033137|Slain2|75991|SLAIN motif family, member 2	AK039970|Slain2|75991|SLAIN motif family, member 2	BC076573|Slain2|75991|SLAIN motif family, member 2
mm9_v1_chr12_+_117519658_117519785	12.4108	CUUUGGU	AK044360|Esyt2|52635|extended synaptotagmin-like protein 2	NM_028731|Esyt2|52635|extended synaptotagmin-like protein 2	AK014813|Esyt2|52635|extended synaptotagmin-like protein 2	AK157352|Esyt2|52635|extended synaptotagmin-like protein 2	BC138937|Esyt2|52635|extended synaptotagmin-like protein 2
mm9_v1_chr14_+_21748646_21748736	12.3712	CUUUGGU	BC008520|Vcl|22330|vinculin	NM_009502|Vcl|22330|vinculin	L18880|Vcl|22330|vinculin
mm9_v1_chr5_+_93238413_93238466	12.3439	CUUUGGU	NM_001077595|Shroom3|27428|shroom family member 3	AK164918|Shroom3|27428|shroom family member 3	AF199422|Shroom3|27428|shroom family member 3
mm9_v1_chr3_-_131047840_131047850	12.0785	CUUUGGU	NM_028943|Sgms2|74442|sphingomyelin synthase 2	BC117782|Sgms2|74442|sphingomyelin synthase 2	AK016659|Sgms2|74442|sphingomyelin synthase 2
mm9_v1_chr4_-_40800995_40801058	11.9856	CUUUGGU	BC026824|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	J03880|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	AK154393|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	BC053006|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	NM_022305|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr1_-_165243777_165243829	11.8886	CUUUGGU	NM_001025570|Prrx1|18933|paired related homeobox 1	NM_011127|Prrx1|18933|paired related homeobox 1	NM_175686|Prrx1|18933|paired related homeobox 1	U03873|Prrx1|18933|paired related homeobox 1	AK084387|Prrx1|18933|paired related homeobox 1	AK029347|Prrx1|18933|paired related homeobox 1
mm9_v1_chr5_+_137791332_137791347	11.8033	CUUUGGU	AK049340|Ephb4|13846|Eph receptor B4	AK132392|Ephb4|13846|Eph receptor B4	NM_001159571|Ephb4|13846|Eph receptor B4	NM_010144|Ephb4|13846|Eph receptor B4
mm9_v1_chr13_+_56710896_56710979	11.674	CUUUGGU	AK135536|Tgfbi|21810|transforming growth factor, beta induced	AK142323|Tgfbi|21810|transforming growth factor, beta induced	AK169912|Tgfbi|21810|transforming growth factor, beta induced	AK150969|Tgfbi|21810|transforming growth factor, beta induced	AK152365|Tgfbi|21810|transforming growth factor, beta induced	AK084431|Tgfbi|21810|transforming growth factor, beta induced	AK150449|Tgfbi|21810|transforming growth factor, beta induced	AK150833|Tgfbi|21810|transforming growth factor, beta induced	AK152662|Tgfbi|21810|transforming growth factor, beta induced	AK164373|Tgfbi|21810|transforming growth factor, beta induced	AK151680|Tgfbi|21810|transforming growth factor, beta induced	AK155828|Tgfbi|21810|transforming growth factor, beta induced	AK159711|Tgfbi|21810|transforming growth factor, beta induced	AK170495|Tgfbi|21810|transforming growth factor, beta induced	AK155572|Tgfbi|21810|transforming growth factor, beta induced	NM_009369|Tgfbi|21810|transforming growth factor, beta induced	L19932|Tgfbi|21810|transforming growth factor, beta induced	BC129900|Tgfbi|21810|transforming growth factor, beta induced	BC129901|Tgfbi|21810|transforming growth factor, beta induced
mm9_v1_chr11_-_80593259_80593526	11.5395	CUUUGGU	AK188302|Myo1d|338367|myosin ID	AK203977|Myo1d|338367|myosin ID	BC150765|Myo1d|338367|myosin ID	AK037051|Myo1d|338367|myosin ID	AK049374|Myo1d|338367|myosin ID	NM_177390|Myo1d|338367|myosin ID
mm9_v1_chr2_+_27741864_27742035	11.5388	CUUUGGU	NM_015734|Col5a1|12831|collagen, type V, alpha 1
mm9_v1_chr3_-_100914081_100914100	11.473	CUUUGGU	AF152344|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	NM_011197|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	BC145713|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	BC145715|Ptgfrn|19221|prostaglandin F2 receptor negative regulator
mm9_v1_chr1_-_74170987_74171037	11.449	CUUUGGU	NM_027884|Tns1|21961|tensin 1
mm9_v1_chr2_+_127951773_127951787	11.3487	CUUUGGU	AK031285|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK037885|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK150464|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK152472|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK153542|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK162975|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_009754|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207680|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207681|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK082613|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	BC019556|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK011490|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK050192|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr6_+_17015148_17015148	11.3027	CUUUGGU	NM_207176|Tes|21753|testis derived transcript
mm9_v1_chr4_-_151370212_151370359	11.2572	CUUUGGU	AY069976|Phf13|230936|PHD finger protein 13	BC029632|Phf13|230936|PHD finger protein 13	BC059282|Phf13|230936|PHD finger protein 13	NM_172705|Phf13|230936|PHD finger protein 13	AK132066|Phf13|230936|PHD finger protein 13
mm9_v1_chr4_-_59562054_59562263	11.1524	CUUUGGU	BC057641|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	BC006638|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK033732|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK088560|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_144904|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_178164|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)
mm9_v1_chr10_+_68675404_68675423	11.1271	CUUUGGU	AK034826|Rhobtb1|69288|Rho-related BTB domain containing 1	NM_001081347|Rhobtb1|69288|Rho-related BTB domain containing 1	BC099973|Rhobtb1|69288|Rho-related BTB domain containing 1
mm9_v1_chr17_+_88840048_88840164	10.998	CUUUGGU	NM_180974|Foxn2|14236|forkhead box N2	AK154401|Foxn2|14236|forkhead box N2	AK030735|Foxn2|14236|forkhead box N2	AK031639|Foxn2|14236|forkhead box N2	BC138824|Foxn2|14236|forkhead box N2	BC138825|Foxn2|14236|forkhead box N2
mm9_v1_chr6_-_37391993_37392195	10.9754	CUUUGGU	BC138470|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	BC138471|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	BC043466|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK041050|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK035695|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK036712|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK042418|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK041669|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	NM_178661|Creb3l2|208647|cAMP responsive element binding protein 3-like 2
mm9_v1_chr3_-_86978431_86978668	10.9595	CUUUGGU	BC023765|Kirrel|170643|kin of IRRE like (Drosophila)	AK158381|Kirrel|170643|kin of IRRE like (Drosophila)	NM_001170985|Kirrel|170643|kin of IRRE like (Drosophila)	NM_130867|Kirrel|170643|kin of IRRE like (Drosophila)
mm9_v1_chr18_-_58369579_58369752	10.8995	CUUUGGU	AK132163|Fbn2|14119|fibrillin 2	NM_010181|Fbn2|14119|fibrillin 2
mm9_v1_chr14_+_70945429_70945513	10.8697	CUUUGGU	BC033929|Reep4|72549|receptor accessory protein 4	NM_180588|Reep4|72549|receptor accessory protein 4	AK187453|Reep4|72549|receptor accessory protein 4	AY562232|Reep4|72549|receptor accessory protein 4
mm9_v1_chr9_+_30838224_30838249	10.6429	CUUUGGU	AK036895|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_001115130|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_172765|Zbtb44|235132|zinc finger and BTB domain containing 44
mm9_v1_chr10_-_66559568_66559740	10.6389	CUUUGGU	AY562231|Reep3|28193|receptor accessory protein 3	AK154559|Reep3|28193|receptor accessory protein 3	AK047728|Reep3|28193|receptor accessory protein 3	AK079649|Reep3|28193|receptor accessory protein 3	NM_178606|Reep3|28193|receptor accessory protein 3	BC004607|Reep3|28193|receptor accessory protein 3	AK008058|Reep3|28193|receptor accessory protein 3	AK012403|Reep3|28193|receptor accessory protein 3	AK005026|Reep3|28193|receptor accessory protein 3	AK028868|Reep3|28193|receptor accessory protein 3
mm9_v1_chr9_-_116084395_116084480	10.6225	CUUUGGU	AK046561|Tgfbr2|21813|transforming growth factor, beta receptor II	AK159327|Tgfbr2|21813|transforming growth factor, beta receptor II	AK148167|Tgfbr2|21813|transforming growth factor, beta receptor II	AK053793|Tgfbr2|21813|transforming growth factor, beta receptor II	NM_009371|Tgfbr2|21813|transforming growth factor, beta receptor II	NM_029575|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr18_+_9707574_9707671	10.3743	CUUUGGU	AK158366|Colec12|140792|collectin sub-family member 12	AK042772|Colec12|140792|collectin sub-family member 12	NM_130449|Colec12|140792|collectin sub-family member 12	BC009162|Colec12|140792|collectin sub-family member 12	BC057936|Colec12|140792|collectin sub-family member 12	AB078434|Colec12|140792|collectin sub-family member 12	AK141928|Colec12|140792|collectin sub-family member 12	BC060657|Colec12|140792|collectin sub-family member 12
mm9_v1_chr7_-_87547589_87547748	10.3707	CUUUGGU	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr3_+_89225539_89225564	10.3541	CUUUGGU	NM_001113331|Shc1|20416|src homology 2 domain-containing transforming protein C1	AK155158|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr2_+_3630729_3630774	10.169	CUUUGGU	AK032875|Fam107b|66540|family with sequence similarity 107, member B	NM_025626|Fam107b|66540|family with sequence similarity 107, member B	AK013932|Fam107b|66540|family with sequence similarity 107, member B	AK168759|Fam107b|66540|family with sequence similarity 107, member B	BC021353|Fam107b|66540|family with sequence similarity 107, member B
mm9_v1_chr15_-_10643273_10643318	10.142	CUUUGGU	AF274866|Rai14|75646|retinoic acid induced 14	BC052458|Rai14|75646|retinoic acid induced 14	NM_030690|Rai14|75646|retinoic acid induced 14	AK006172|Rai14|75646|retinoic acid induced 14
mm9_v1_chr9_+_102620096_102620187	10.1083	CUUUGGU	AK141348|Amotl2|56332|angiomotin-like 2	AK164819|Amotl2|56332|angiomotin-like 2	NM_019764|Amotl2|56332|angiomotin-like 2	AK077535|Amotl2|56332|angiomotin-like 2	AK169419|Amotl2|56332|angiomotin-like 2	BC035201|Amotl2|56332|angiomotin-like 2	BC027824|Amotl2|56332|angiomotin-like 2
mm9_v1_chr2_+_92024338_92024494	10.0574	CUUUGGU	NM_138755|Phf21a|192285|PHD finger protein 21A	AB105178|Phf21a|192285|PHD finger protein 21A	AK089411|Phf21a|192285|PHD finger protein 21A	BC019181|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr15_+_58720783_58720964	9.95689	CUUUGGU	AK029069|Rnf139|75841|ring finger protein 139	NM_175226|Rnf139|75841|ring finger protein 139	AK028400|Rnf139|75841|ring finger protein 139	BC052901|Rnf139|75841|ring finger protein 139	AK033506|Rnf139|75841|ring finger protein 139	AK171807|Tatdn1|69694|TatD DNase domain containing 1
mm9_v1_chr6_-_83267540_83267619	9.83338	CUUUGGU	J04627|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK076801|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK076019|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK159680|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK166262|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	BC019511|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK152249|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK165840|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	NM_008638|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
mm9_v1_chr6_-_49164952_49164952	9.77922	CUUUGGU	AK147140|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	NM_023670|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3
mm9_v1_chr14_-_70751120_70751274	9.72498	CUUUGGU	AK158096|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AB177995|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	BC021530|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135151|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_144808|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr10_+_79317316_79317391	9.68572	CUUUGGU	AK151292|Ptbp1|19205|polypyrimidine tract binding protein 1	AK153561|Ptbp1|19205|polypyrimidine tract binding protein 1	NM_001077363|Ptbp1|19205|polypyrimidine tract binding protein 1	NM_008956|Ptbp1|19205|polypyrimidine tract binding protein 1	AK163274|Ptbp1|19205|polypyrimidine tract binding protein 1	BC007472|Ptbp1|19205|polypyrimidine tract binding protein 1	AK082600|Ptbp1|19205|polypyrimidine tract binding protein 1	AK150840|Ptbp1|19205|polypyrimidine tract binding protein 1	AK168392|Ptbp1|19205|polypyrimidine tract binding protein 1	AK037607|Ptbp1|19205|polypyrimidine tract binding protein 1	AK172712|Ptbp1|19205|polypyrimidine tract binding protein 1	AK044956|Ptbp1|19205|polypyrimidine tract binding protein 1	AK043824|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr6_-_98978185_98978383	9.61757	CUUUGGU	AK077062|Foxp1|108655|forkhead box P1	AK144920|Foxp1|108655|forkhead box P1	NM_001197322|Foxp1|108655|forkhead box P1
mm9_v1_chr11_-_63735652_63735808	9.59492	CUUUGGU	BC116733|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	BC116743|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	AF168992|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	AK171996|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	AK172015|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	AK172271|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	NM_018805|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	AK085242|Hs3st3b1|54710|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
mm9_v1_chr16_+_17233664_17233756	9.57395	CUUUGGU	AK157276|Hic2|58180|hypermethylated in cancer 2	AK156332|Hic2|58180|hypermethylated in cancer 2	NM_178922|Hic2|58180|hypermethylated in cancer 2	BC065124|Hic2|58180|hypermethylated in cancer 2	AK129266|Hic2|58180|hypermethylated in cancer 2	AK084975|Hic2|58180|hypermethylated in cancer 2
mm9_v1_chr7_-_79451480_79451493	9.55372	CUUUGGU	BC086658|Mctp2|244049|multiple C2 domains, transmembrane 2	NM_001024703|Mctp2|244049|multiple C2 domains, transmembrane 2	AK156983|Mctp2|244049|multiple C2 domains, transmembrane 2
mm9_v1_chr6_-_52195743_52195808	9.53964	CUUUGGU	BC119302|Hoxa11|15396|homeobox A11	U20370|Hoxa11|15396|homeobox A11	NM_010450|Hoxa11|15396|homeobox A11	BC052232|Hoxa11|15396|homeobox A11	AK133481|Hoxa11|15396|homeobox A11
mm9_v1_chr2_-_65962685_65962849	9.53293	CUUUGGU	U70538|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	BC043331|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	BC003765|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	AK007135|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	AK135489|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	AK019995|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	NM_015736|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
mm9_v1_chr6_-_92851434_92851434	9.46745	CUUUGGU	NM_175314|Adamts9|101401|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
mm9_v1_chr18_+_35278553_35278581	9.44645	CUUUGGU	NM_009818|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	X59990|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	AK148496|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	BC060174|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	BC068316|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	D90362|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	BC048163|Ctnna1|12385|catenin (cadherin associated protein), alpha 1
mm9_v1_chr7_-_87550315_87550316	9.41651	CUUUGGU	AK020294|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_001081454|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr1_-_132994093_132994119	9.32031	CUUUGGU	X76850|Mapkapk2|17164|MAP kinase-activated protein kinase 2	BC063064|Mapkapk2|17164|MAP kinase-activated protein kinase 2	NM_008551|Mapkapk2|17164|MAP kinase-activated protein kinase 2
mm9_v1_chr3_-_115710131_115710328	9.21444	CUUUGGU	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr16_-_45844409_45844495	9.19795	CUUUGGU	AK165251|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	AF506821|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	NM_153412|Phldb2|208177|pleckstrin homology-like domain, family B, member 2
mm9_v1_chr8_+_12757011_12757296	9.13421	CUUUGGU	AK147497|Atp11a|50770|ATPase, class VI, type 11A	NM_015804|Atp11a|50770|ATPase, class VI, type 11A	AF156551|Atp11a|50770|ATPase, class VI, type 11A	BC145399|Atp11a|50770|ATPase, class VI, type 11A	BC145400|Atp11a|50770|ATPase, class VI, type 11A	BC138715|Atp11a|50770|ATPase, class VI, type 11A
mm9_v1_chr9_+_69301471_69301531	9.12339	CUUUGGU	AK012563|Anxa2|12306|annexin A2	BC003327|Anxa2|12306|annexin A2	NM_007585|Anxa2|12306|annexin A2	AK164507|Anxa2|12306|annexin A2	AK088645|Anxa2|12306|annexin A2	AK168083|Anxa2|12306|annexin A2	AK146096|Anxa2|12306|annexin A2	AK150586|Anxa2|12306|annexin A2	AK152561|Anxa2|12306|annexin A2	AK160746|Anxa2|12306|annexin A2	AK165888|Anxa2|12306|annexin A2	AK167894|Anxa2|12306|annexin A2	BC005763|Anxa2|12306|annexin A2
mm9_v1_chr5_-_114830457_114830513	8.96232	CUUUGGU	AK147714|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK163351|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK161199|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK028657|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK041516|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK145295|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK166505|Kctd10|330171|potassium channel tetramerisation domain containing 10	BC006935|Kctd10|330171|potassium channel tetramerisation domain containing 10	NM_001159941|Kctd10|330171|potassium channel tetramerisation domain containing 10	NM_026145|Kctd10|330171|potassium channel tetramerisation domain containing 10
mm9_v1_chr14_+_117324518_117324572	8.96201	CUUUGGU	AK164668|Gpc6|23888|glypican 6	AK135442|Gpc6|23888|glypican 6	NM_001079844|Gpc6|23888|glypican 6	NM_011821|Gpc6|23888|glypican 6
mm9_v1_chr17_-_35653683_35653815	8.87481	CUUUGGU	S53376|Tcf19|106795|transcription factor 19	BC004617|Tcf19|106795|transcription factor 19	AK078697|Tcf19|106795|transcription factor 19	AK088479|Tcf19|106795|transcription factor 19	AK077414|Tcf19|106795|transcription factor 19	NM_001163763|Tcf19|106795|transcription factor 19	NM_001163764|Tcf19|106795|transcription factor 19	NM_025674|Tcf19|106795|transcription factor 19
mm9_v1_chr2_+_118752232_118752411	8.872	CUUUGGU	NM_028117|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154555|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK155115|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC043700|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154636|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK159357|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK011230|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC085479|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK171614|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC026886|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm9_v1_chr9_-_117539030_117539030	8.8662	CUUUGGU	AK046197|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172121|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr17_-_31992708_31992780	8.7694	CUUUGGU	U11494|Sik1|17691|salt inducible kinase 1	AK141817|Sik1|17691|salt inducible kinase 1	NM_010831|Sik1|17691|salt inducible kinase 1	AK172427|Sik1|17691|salt inducible kinase 1
mm9_v1_chr18_+_61204798_61204855	8.75567	CUUUGGU	BC055311|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_001146268|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_008809|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK143247|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK134785|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide
mm9_v1_chr3_+_152059620_152059689	8.74328	CUUUGGU	BC060614|Zzz3|108946|zinc finger, ZZ domain containing 3	NM_198416|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr3_+_80840337_80840337	8.73863	CUUUGGU	AF266467|Pdgfc|54635|platelet-derived growth factor, C polypeptide	NM_019971|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr14_+_119337150_119337225	8.73786	CUUUGGU	NM_008929|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	AK146097|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	AK148270|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	BC013766|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3	U28423|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3
mm9_v1_chr10_+_74675134_74675134	8.68161	CUUUGGU	AB093236|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	NM_001145826|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like
mm9_v1_chr9_+_114640266_114640368	8.63573	CUUUGGU	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr3_+_52845429_52845504	8.62292	CUUUGGU	BC052079|Lhfp|108927|lipoma HMGIC fusion partner	NM_175386|Lhfp|108927|lipoma HMGIC fusion partner	AK159549|Lhfp|108927|lipoma HMGIC fusion partner	AK159126|Lhfp|108927|lipoma HMGIC fusion partner	AK171791|Lhfp|108927|lipoma HMGIC fusion partner	AK172390|Lhfp|108927|lipoma HMGIC fusion partner	AK172532|Lhfp|108927|lipoma HMGIC fusion partner	BC095934|Lhfp|108927|lipoma HMGIC fusion partner
mm9_v1_chr6_-_99216494_99216530	8.49795	CUUUGGU	BC064764|Foxp1|108655|forkhead box P1	AK171994|Foxp1|108655|forkhead box P1	BC065386|Foxp1|108655|forkhead box P1	NM_001197321|Foxp1|108655|forkhead box P1	AK040800|Foxp1|108655|forkhead box P1
mm9_v1_chrX_+_103222548_103222685	8.49217	CUUUGGU	AK017506|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK033254|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_001109757|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	NM_009726|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK155643|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK171563|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK172209|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U03434|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	U71091|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	BC141395|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr3_+_97817440_97817471	8.48253	CUUUGGU	AK157200|Notch2|18129|Notch gene homolog 2 (Drosophila)	D32210|Notch2|18129|Notch gene homolog 2 (Drosophila)	NM_010928|Notch2|18129|Notch gene homolog 2 (Drosophila)
mm9_v1_chr6_+_91634056_91634194	8.47539	CUUUGGU	NM_009320|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK041141|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	L03292|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK143510|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK162776|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC015245|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm9_v1_chr4_+_47220883_47221121	8.40325	CUUUGGU	NM_009928|Col15a1|12819|collagen, type XV, alpha 1	BC052428|Col15a1|12819|collagen, type XV, alpha 1	AF011450|Col15a1|12819|collagen, type XV, alpha 1	AK134030|Col15a1|12819|collagen, type XV, alpha 1
mm9_v1_chr3_+_63099793_63099793	8.35443	CUUUGGU	AK031446|Mme|17380|membrane metallo endopeptidase	NM_008604|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr18_+_64500017_64500040	8.28147	CUUUGGU	AY242995|Onecut2|225631|one cut domain, family member 2	NM_194268|Onecut2|225631|one cut domain, family member 2	BC100750|Onecut2|225631|one cut domain, family member 2	BC100755|Onecut2|225631|one cut domain, family member 2	BC103668|Onecut2|225631|one cut domain, family member 2
mm9_v1_chr10_+_126432666_126432668	8.25826	CUUUGGU	BC025650|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	NM_146012|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chr9_+_72510153_72510370	8.24149	CUUUGGU	D85414|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	NM_010890|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK088767|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK133838|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK144240|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK169582|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK088620|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	BC138813|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK050517|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK080349|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK160570|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	AK122203|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4	BC080710|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr10_+_74674793_74674887	8.19605	CUUUGGU	AK035500|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AY884297|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	NM_153406|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK052716|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK172502|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like
mm9_v1_chr9_+_109778051_109778082	8.17787	CUUUGGU	AK077991|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)	NM_007658|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)
mm9_v1_chr13_-_64376186_64376295	8.1706	CUUUGGU	BC057357|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	BC049794|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	AK161345|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_172587|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr15_-_96886327_96886398	8.17001	CUUUGGU	AK164292|Slc38a4|69354|solute carrier family 38, member 4	AK167539|Slc38a4|69354|solute carrier family 38, member 4	AK051023|Slc38a4|69354|solute carrier family 38, member 4	NM_027052|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr3_-_129035406_129035666	8.11571	CUUUGGU	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr18_+_32322742_32322855	8.08709	CUUUGGU	AK036364|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	NM_011946|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK143367|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	AK050667|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2	U43186|Map3k2|26405|mitogen-activated protein kinase kinase kinase 2
mm9_v1_chr3_+_89222458_89222496	8.08076	CUUUGGU	NM_011368|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr13_+_118009379_118009441	8.04432	CUUUGGU	NM_010330|Emb|13723|embigin	AK138271|Emb|13723|embigin	AK079570|Emb|13723|embigin
mm9_v1_chr7_-_29383180_29383213	8.02393	CUUUGGU	AK129298|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4	NM_027470|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr13_-_89881946_89882116	7.99661	CUUUGGU	BC021652|Vcan|13003|versican	AK163927|Vcan|13003|versican	AK135324|Vcan|13003|versican	AK032794|Vcan|13003|versican	NM_001081249|Vcan|13003|versican	NM_001134474|Vcan|13003|versican	NM_001134475|Vcan|13003|versican	NM_019389|Vcan|13003|versican	NM_172955|Vcan|13003|versican
mm9_v1_chr6_-_99385338_99385338	7.98956	CUUUGGU	NM_053202|Foxp1|108655|forkhead box P1
mm9_v1_chr15_+_10106992_10106998	7.94962	CUUUGGU	AK054551|Prlr|19116|prolactin receptor	NM_011169|Prlr|19116|prolactin receptor	AK042147|Prlr|19116|prolactin receptor
mm9_v1_chr11_-_100259048_100259060	7.91085	CUUUGGU	BC040757|Jup|16480|junction plakoglobin	NM_010593|Jup|16480|junction plakoglobin	BC094461|Jup|16480|junction plakoglobin
mm9_v1_chr1_-_158404299_158404465	7.89624	CUUUGGU	AK213760|Soat1|20652|sterol O-acyltransferase 1	AK054149|Soat1|20652|sterol O-acyltransferase 1	AK142486|Soat1|20652|sterol O-acyltransferase 1	DQ903181|Soat1|20652|sterol O-acyltransferase 1	S81092|Soat1|20652|sterol O-acyltransferase 1	AK159393|Soat1|20652|sterol O-acyltransferase 1	AK159529|Soat1|20652|sterol O-acyltransferase 1	AK160017|Soat1|20652|sterol O-acyltransferase 1	NM_009230|Soat1|20652|sterol O-acyltransferase 1
mm9_v1_chr15_+_7760845_7761031	7.88542	CUUUGGU	D88264|Gdnf|14573|glial cell line derived neurotrophic factor	U75532|Gdnf|14573|glial cell line derived neurotrophic factor	NM_010275|Gdnf|14573|glial cell line derived neurotrophic factor	U37459|Gdnf|14573|glial cell line derived neurotrophic factor	BC119031|Gdnf|14573|glial cell line derived neurotrophic factor
mm9_v1_chr9_+_32503600_32503674	7.83098	CUUUGGU	NM_001038642|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	NM_011808|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	BC010588|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	AK168247|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain
mm9_v1_chr4_+_116393559_116393581	7.79961	CUUUGGU	AK047755|Tesk2|230661|testis-specific kinase 2	NM_146151|Tesk2|230661|testis-specific kinase 2	AK031814|Tesk2|230661|testis-specific kinase 2	AK053368|Tesk2|230661|testis-specific kinase 2	BC029766|Tesk2|230661|testis-specific kinase 2
mm9_v1_chr5_+_104183148_104183208	7.79358	CUUUGGU	AK142554|Aff1|17355|AF4/FMR2 family, member 1	NM_133919|Aff1|17355|AF4/FMR2 family, member 1
mm9_v1_chr16_+_58408609_58408667	7.78159	CUUUGGU	BC066097|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2	NM_028523|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2
mm9_v1_chr10_+_69559860_69560052	7.74962	CUUUGGU	NM_001111121|Ccdc6|76551|coiled-coil domain containing 6
mm9_v1_chr6_-_72185570_72185570	7.74708	CUUUGGU	AB046527|Atoh8|71093|atonal homolog 8 (Drosophila)	NM_153778|Atoh8|71093|atonal homolog 8 (Drosophila)
mm9_v1_chr7_+_94395160_94395355	7.73742	CUUUGGU	AK169304|Nox4|50490|NADPH oxidase 4	AK087097|Nox4|50490|NADPH oxidase 4	AF261944|Nox4|50490|NADPH oxidase 4	AF276957|Nox4|50490|NADPH oxidase 4	AK050371|Nox4|50490|NADPH oxidase 4	AK085509|Nox4|50490|NADPH oxidase 4	AK149398|Nox4|50490|NADPH oxidase 4	AK149455|Nox4|50490|NADPH oxidase 4	AK149492|Nox4|50490|NADPH oxidase 4	NM_015760|Nox4|50490|NADPH oxidase 4	AK052905|Nox4|50490|NADPH oxidase 4	AB041034|Nox4|50490|NADPH oxidase 4	AB042745|Nox4|50490|NADPH oxidase 4	AF218723|Nox4|50490|NADPH oxidase 4	BC138918|Nox4|50490|NADPH oxidase 4	BC145462|Nox4|50490|NADPH oxidase 4	BC021378|Nox4|50490|NADPH oxidase 4	EU861989|Nox4|50490|NADPH oxidase 4
mm9_v1_chr13_-_47025086_47025155	7.62546	CUUUGGU	AB037923|Kif13a|16553|kinesin family member 13A	NM_010617|Kif13a|16553|kinesin family member 13A
mm9_v1_chr15_+_100058249_100058291	7.62071	CUUUGGU	AK144511|Atf1|11908|activating transcription factor 1	NM_007497|Atf1|11908|activating transcription factor 1
mm9_v1_chr5_+_104183591_104183591	7.61905	CUUUGGU	AK143742|Aff1|17355|AF4/FMR2 family, member 1	NM_001080798|Aff1|17355|AF4/FMR2 family, member 1
mm9_v1_chr6_-_30254273_30254567	7.60128	CUUUGGU	U19854|Ube2h|22214|ubiquitin-conjugating enzyme E2H	BC008517|Ube2h|22214|ubiquitin-conjugating enzyme E2H	AK131688|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001170345|Gm2058|100039133|predicted gene 2058	AK161414|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001169576|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_009459|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr4_-_87679175_87679310	7.58902	CUUUGGU	BC021420|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AF372456|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_027326|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr6_-_131338465_131338473	7.56225	CUUUGGU	BC027785|Csda|56449|cold shock domain protein A	NM_011733|Csda|56449|cold shock domain protein A	NM_139117|Csda|56449|cold shock domain protein A
mm9_v1_chr12_-_16807691_16807691	7.534	CUUUGGU	NM_015764|Greb1|268527|gene regulated by estrogen in breast cancer protein
mm9_v1_chr15_-_10644312_10644406	7.52228	CUUUGGU	AK045733|Rai14|75646|retinoic acid induced 14	AK129333|Rai14|75646|retinoic acid induced 14	AK090343|Rai14|75646|retinoic acid induced 14	NM_001166408|Rai14|75646|retinoic acid induced 14
mm9_v1_chr13_-_38620307_38620383	7.51048	CUUUGGU	AK224952|Txndc5|105245|thioredoxin domain containing 5	AK224967|Txndc5|105245|thioredoxin domain containing 5	AY243534|Txndc5|105245|thioredoxin domain containing 5	AK169680|Txndc5|105245|thioredoxin domain containing 5	AK224923|Txndc5|105245|thioredoxin domain containing 5	AK225005|Txndc5|105245|thioredoxin domain containing 5	AK225014|Txndc5|105245|thioredoxin domain containing 5	BC016252|Txndc5|105245|thioredoxin domain containing 5	AK224999|Txndc5|105245|thioredoxin domain containing 5	AK224976|Txndc5|105245|thioredoxin domain containing 5	AK224965|Txndc5|105245|thioredoxin domain containing 5	AK224966|Txndc5|105245|thioredoxin domain containing 5	AK224979|Txndc5|105245|thioredoxin domain containing 5	AK224988|Txndc5|105245|thioredoxin domain containing 5	AK224947|Txndc5|105245|thioredoxin domain containing 5	AK224924|Txndc5|105245|thioredoxin domain containing 5	NM_145367|Txndc5|105245|thioredoxin domain containing 5	AK224939|Txndc5|105245|thioredoxin domain containing 5	AK224991|Txndc5|105245|thioredoxin domain containing 5	AK224992|Txndc5|105245|thioredoxin domain containing 5	AK224993|Txndc5|105245|thioredoxin domain containing 5	AK150781|Txndc5|105245|thioredoxin domain containing 5	AK224978|Txndc5|105245|thioredoxin domain containing 5	AK224938|Txndc5|105245|thioredoxin domain containing 5	AK224945|Txndc5|105245|thioredoxin domain containing 5	AK224977|Txndc5|105245|thioredoxin domain containing 5	AK224983|Txndc5|105245|thioredoxin domain containing 5	AK224990|Txndc5|105245|thioredoxin domain containing 5	AK142049|Txndc5|105245|thioredoxin domain containing 5	AK224946|Txndc5|105245|thioredoxin domain containing 5	AK224913|Txndc5|105245|thioredoxin domain containing 5	AK224972|Txndc5|105245|thioredoxin domain containing 5	AK224937|Txndc5|105245|thioredoxin domain containing 5	AK224989|Txndc5|105245|thioredoxin domain containing 5	AK224994|Txndc5|105245|thioredoxin domain containing 5	AK225004|Txndc5|105245|thioredoxin domain containing 5	AK225007|Txndc5|105245|thioredoxin domain containing 5	AK225010|Txndc5|105245|thioredoxin domain containing 5	AK225011|Txndc5|105245|thioredoxin domain containing 5	AK224934|Txndc5|105245|thioredoxin domain containing 5	AK224936|Txndc5|105245|thioredoxin domain containing 5	AK224951|Txndc5|105245|thioredoxin domain containing 5	AK224960|Txndc5|105245|thioredoxin domain containing 5	AK224982|Txndc5|105245|thioredoxin domain containing 5	AK225001|Txndc5|105245|thioredoxin domain containing 5	AK224927|Txndc5|105245|thioredoxin domain containing 5	AK224963|Txndc5|105245|thioredoxin domain containing 5	AK224964|Txndc5|105245|thioredoxin domain containing 5	AK224971|Txndc5|105245|thioredoxin domain containing 5	AK224986|Txndc5|105245|thioredoxin domain containing 5	AK225023|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr16_-_92697567_92697590	7.49128	CUUUGGU	AK155262|Runx1|12394|runt related transcription factor 1	D26532|Runx1|12394|runt related transcription factor 1	NM_001111023|Runx1|12394|runt related transcription factor 1	NM_009821|Runx1|12394|runt related transcription factor 1
mm9_v1_chr3_+_152058937_152059038	7.44912	CUUUGGU	NM_001080755|Zzz3|108946|zinc finger, ZZ domain containing 3	AK131150|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr19_-_4397075_4397085	7.3633	CUUUGGU	AK037157|Kdm2a|225876|lysine (K)-specific demethylase 2A	AK161980|Kdm2a|225876|lysine (K)-specific demethylase 2A	NM_001001984|Kdm2a|225876|lysine (K)-specific demethylase 2A	AK155866|Kdm2a|225876|lysine (K)-specific demethylase 2A
mm9_v1_chr6_+_86992796_86992906	7.33635	CUUUGGU	AK087173|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	NM_013528|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK019852|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK039792|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC050762|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AF334736|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC010516|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr3_-_102008512_102008615	7.33491	CUUUGGU	AK167743|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	AF481860|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	NM_177545|Vangl1|229658|vang-like 1 (van gogh, Drosophila)
mm9_v1_chr14_+_65977510_65977519	7.32961	CUUUGGU	AK155538|Zfp395|380912|zinc finger protein 395	NM_199029|Zfp395|380912|zinc finger protein 395
mm9_v1_chr9_-_113617224_113617390	7.30199	CUUUGGU	AJ005073|Pdcd6ip|18571|programmed cell death 6 interacting protein	AJ005074|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC051123|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC026823|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK167574|Pdcd6ip|18571|programmed cell death 6 interacting protein	AF119955|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK029827|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK129340|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK147736|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK031256|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK033943|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK145893|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK169704|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164677|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164678|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_011052|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr6_+_54766562_54766917	7.29337	CUUUGGU	AF513708|Znrf2|387524|zinc and ring finger 2	NM_199143|Znrf2|387524|zinc and ring finger 2	BC104316|Znrf2|387524|zinc and ring finger 2	BC104317|Znrf2|387524|zinc and ring finger 2	BC125242|Znrf2|387524|zinc and ring finger 2
mm9_v1_chr11_+_53583927_53584130	7.22934	CUUUGGU	NM_001159396|Irf1|16362|interferon regulatory factor 1	BC003821|Irf1|16362|interferon regulatory factor 1
mm9_v1_chr8_+_111238543_111238543	7.21014	CUUUGGU	D26046|Zfhx3|11906|zinc finger homeobox 3	NM_007496|Zfhx3|11906|zinc finger homeobox 3
mm9_v1_chr13_-_39052743_39052743	7.20593	CUUUGGU	AK141280|Slc35b3|108652|solute carrier family 35, member B3	NM_001170431|Slc35b3|108652|solute carrier family 35, member B3
mm9_v1_chr7_+_148654681_148654765	7.18365	CUUUGGU	NM_001111050|Cd151|12476|CD151 antigen	U89772|Cd151|12476|CD151 antigen	BC012236|Cd151|12476|CD151 antigen
mm9_v1_chr15_-_97923632_97923835	7.16237	CUUUGGU	AK028565|Senp1|223870|SUMO1/sentrin specific peptidase 1	AK088597|Senp1|223870|SUMO1/sentrin specific peptidase 1	AK138013|Senp1|223870|SUMO1/sentrin specific peptidase 1	AK035581|Senp1|223870|SUMO1/sentrin specific peptidase 1	NM_144851|Senp1|223870|SUMO1/sentrin specific peptidase 1
mm9_v1_chr4_-_84320976_84320992	7.10812	CUUUGGU	AK030323|Bnc2|242509|basonuclin 2	NM_172870|Bnc2|242509|basonuclin 2
mm9_v1_chr10_-_92185071_92185164	7.09335	CUUUGGU	BC066870|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	D10712|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK090040|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK048393|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK085355|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	BC052430|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK010591|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	NM_008682|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK153746|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1
mm9_v1_chr1_+_141318927_141318961	7.07485	CUUUGGU	NM_172643|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog	AK036544|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog
mm9_v1_chr8_-_118230771_118230819	7.05542	CUUUGGU	AK132165|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	NM_001025577|Maf|17132|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm9_v1_chr11_+_93857338_93857584	7.04311	CUUUGGU	AK161623|Spag9|70834|sperm associated antigen 9	NM_027569|Spag9|70834|sperm associated antigen 9	AF327451|Spag9|70834|sperm associated antigen 9	AB047782|Spag9|70834|sperm associated antigen 9	FJ042496|Spag9|70834|sperm associated antigen 9	AK030165|Spag9|70834|sperm associated antigen 9
mm9_v1_chr3_-_102007885_102007885	7.03349	CUUUGGU	AK135230|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	NM_001165951|Vangl1|229658|vang-like 1 (van gogh, Drosophila)
mm9_v1_chr13_-_39052356_39052405	6.9623	CUUUGGU	AK077208|Slc35b3|108652|solute carrier family 35, member B3	AK079504|Slc35b3|108652|solute carrier family 35, member B3	BC006881|Slc35b3|108652|solute carrier family 35, member B3	AK076592|Slc35b3|108652|solute carrier family 35, member B3	NM_001170430|Slc35b3|108652|solute carrier family 35, member B3	NM_134060|Slc35b3|108652|solute carrier family 35, member B3
mm9_v1_chrX_+_135751704_135751704	6.95153	CUUUGGU	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr16_-_92826307_92826318	6.94357	CUUUGGU	AK165307|Runx1|12394|runt related transcription factor 1	AK145098|Runx1|12394|runt related transcription factor 1	NM_001111021|Runx1|12394|runt related transcription factor 1	NM_001111022|Runx1|12394|runt related transcription factor 1	AK040240|Runx1|12394|runt related transcription factor 1
mm9_v1_chr19_+_45092581_45092707	6.94314	CUUUGGU	NM_001130526|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK081367|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK129446|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr4_-_56878011_56878101	6.93605	CUUUGGU	AK082755|Ctnnal1|54366|catenin (cadherin associated protein), alpha-like 1	AK034393|Ctnnal1|54366|catenin (cadherin associated protein), alpha-like 1	BC050070|Ctnnal1|54366|catenin (cadherin associated protein), alpha-like 1	AF006071|Ctnnal1|54366|catenin (cadherin associated protein), alpha-like 1	NM_018761|Ctnnal1|54366|catenin (cadherin associated protein), alpha-like 1
mm9_v1_chr7_-_118006397_118006572	6.93277	CUUUGGU	AK004726|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1	NM_053247|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1	BC038653|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1	BC038892|Lyve1|114332|lymphatic vessel endothelial hyaluronan receptor 1
mm9_v1_chr6_+_15135505_15135508	6.92824	CUUUGGU	BC062926|Foxp2|114142|forkhead box P2	NM_212435|Foxp2|114142|forkhead box P2	BC058960|Foxp2|114142|forkhead box P2
mm9_v1_chr17_+_28938070_28938070	6.91364	CUUUGGU	AK147555|Brpf3|268936|bromodomain and PHD finger containing, 3	NM_001081315|Brpf3|268936|bromodomain and PHD finger containing, 3
mm9_v1_chr4_+_139131050_139131050	6.90571	CUUUGGU	NM_183148|Iffo2|212632|intermediate filament family orphan 2
mm9_v1_chr2_+_120393393_120393485	6.8952	CUUUGGU	AK019162|Snap23|20619|synaptosomal-associated protein 23	NM_001177792|Snap23|20619|synaptosomal-associated protein 23	NM_001177793|Snap23|20619|synaptosomal-associated protein 23	NM_009222|Snap23|20619|synaptosomal-associated protein 23	AK171763|Snap23|20619|synaptosomal-associated protein 23	AK017311|Snap23|20619|synaptosomal-associated protein 23	BC070456|Snap23|20619|synaptosomal-associated protein 23	AB007444|Snap23|20619|synaptosomal-associated protein 23
mm9_v1_chr11_-_74983756_74983756	6.89026	CUUUGGU	AJ585343|Hic1|15248|hypermethylated in cancer 1	NM_010430|Hic1|15248|hypermethylated in cancer 1
mm9_v1_chr3_+_79433000_79433076	6.85089	CUUUGGU	NM_029482|4930579G24Rik|75939|RIKEN cDNA 4930579G24 gene	AK137776|4930579G24Rik|75939|RIKEN cDNA 4930579G24 gene	BC052483|4930579G24Rik|75939|RIKEN cDNA 4930579G24 gene
mm9_v1_chr11_+_53914425_53914544	6.83137	CUUUGGU	NM_001136076|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	NM_011031|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK053504|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK142624|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK144124|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK145535|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	BC018411|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
mm9_v1_chr5_+_144165482_144165519	6.79394	CUUUGGU	NM_025841|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2	AK003515|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2	AK150402|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2	AJ278133|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2	AK007403|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2	BC007146|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
mm9_v1_chr15_-_98438063_98438063	6.7596	CUUUGGU	AK147516|Adcy6|11512|adenylate cyclase 6	NM_007405|Adcy6|11512|adenylate cyclase 6
mm9_v1_chr11_+_69659873_69659874	6.73914	CUUUGGU	AK075841|Plscr3|70310|phospholipid scramblase 3	NM_001168497|Plscr3|70310|phospholipid scramblase 3
mm9_v1_chr6_+_140572056_140572226	6.73575	CUUUGGU	NM_001005605|Aebp2|11569|AE binding protein 2
mm9_v1_chr5_-_151992724_151992782	6.72616	CUUUGGU	AK148227|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	AK050259|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	NM_001163493|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	NM_146258|Stard13|243362|StAR-related lipid transfer (START) domain containing 13	BC027830|Stard13|243362|StAR-related lipid transfer (START) domain containing 13
mm9_v1_chr3_+_52072251_52072295	6.71906	CUUUGGU	AK154041|Foxo1|56458|forkhead box O1	NM_019739|Foxo1|56458|forkhead box O1	AJ252157|Foxo1|56458|forkhead box O1
mm9_v1_chr12_-_88729144_88729282	6.68643	CUUUGGU	U27455|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	X95642|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK089019|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK008871|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK044917|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK159346|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	NM_011479|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	BC003227|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK057644|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2
mm9_v1_chr12_+_112278008_112278010	6.6736	CUUUGGU	NM_198023|Rcor1|217864|REST corepressor 1	BC042731|Rcor1|217864|REST corepressor 1
mm9_v1_chr11_+_78002249_78002305	6.66959	CUUUGGU	NM_033475|Rab34|19376|RAB34, member of RAS oncogene family	BC028481|Rab34|19376|RAB34, member of RAS oncogene family	AK160308|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr14_-_70748237_70748239	6.66669	CUUUGGU	AK090193|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AK050076|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135152|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr11_+_78001871_78001989	6.66647	CUUUGGU	NM_001159482|Rab34|19376|RAB34, member of RAS oncogene family	AF327929|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr10_-_33927262_33927356	6.59797	CUUUGGU	AK045065|Dse|212898|dermatan sulfate epimerase	BC053095|Dse|212898|dermatan sulfate epimerase	NM_172508|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr4_-_45543623_45543714	6.56719	CUUUGGU	NM_001033306|Shb|230126|src homology 2 domain-containing transforming protein B
mm9_v1_chr4_-_136391849_136391926	6.54566	CUUUGGU	BC043088|Ephb2|13844|Eph receptor B2	NM_010142|Ephb2|13844|Eph receptor B2	BC062924|Ephb2|13844|Eph receptor B2	AK017630|Ephb2|13844|Eph receptor B2	L25890|Ephb2|13844|Eph receptor B2
mm9_v1_chr15_-_77672472_77672592	6.53762	CUUUGGU	AK147216|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147221|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK165379|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC116417|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC116418|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC128497|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC128498|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147215|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147222|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147203|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AJ312390|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147223|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK040822|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK083071|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147209|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147210|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147235|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147296|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147407|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147233|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147206|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK053221|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147208|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147430|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	NM_022410|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147211|Myh9|17886|myosin, heavy polypeptide 9, non-muscle
mm9_v1_chr16_-_22163264_22163371	6.52617	CUUUGGU	NM_183029|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chrX_+_135744582_135744582	6.51514	CUUUGGU	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr14_+_12386043_12386066	6.45623	CUUUGGU	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr10_-_119913990_119913990	6.44502	CUUUGGU	NM_010441|Hmga2|15364|high mobility group AT-hook 2
mm9_v1_chr1_+_166179176_166179227	6.38837	CUUUGGU	AK044825|Slc19a2|116914|solute carrier family 19 (thiamine transporter), member 2	AF179403|Slc19a2|116914|solute carrier family 19 (thiamine transporter), member 2	AF418986|Slc19a2|116914|solute carrier family 19 (thiamine transporter), member 2	NM_054087|Slc19a2|116914|solute carrier family 19 (thiamine transporter), member 2	AF360396|Slc19a2|116914|solute carrier family 19 (thiamine transporter), member 2	BC034659|Slc19a2|116914|solute carrier family 19 (thiamine transporter), member 2	AF216204|Slc19a2|116914|solute carrier family 19 (thiamine transporter), member 2
mm9_v1_chr2_-_73367455_73367546	6.37	CUUUGGU	BC049788|Wipf1|215280|WAS/WASL interacting protein family, member 1	NM_153138|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr3_+_58219610_58219610	6.36579	CUUUGGU	NM_001081229|Tsc22d2|72033|TSC22 domain family, member 2
mm9_v1_chr10_-_36858671_36858801	6.36412	CUUUGGU	BC046601|Marcks|17118|myristoylated alanine rich protein kinase C substrate	M60474|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC002068|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC039911|Marcks|17118|myristoylated alanine rich protein kinase C substrate	NM_008538|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr13_-_115248924_115248982	6.32271	CUUUGGU	AK083556|Fst|14313|follistatin	NM_008046|Fst|14313|follistatin	BC144926|Fst|14313|follistatin	BC145945|Fst|14313|follistatin
mm9_v1_chr6_-_82724366_82724447	6.302	CUUUGGU	BC054472|Hk2|15277|hexokinase 2	AJ238540|Hk2|15277|hexokinase 2	AK019092|Hk2|15277|hexokinase 2	AK145936|Hk2|15277|hexokinase 2	AK009328|Hk2|15277|hexokinase 2	NM_013820|Hk2|15277|hexokinase 2
mm9_v1_chr10_+_127814144_127814228	6.28228	CUUUGGU	AK144017|Ankrd52|237615|ankyrin repeat domain 52	AK032429|Ankrd52|237615|ankyrin repeat domain 52	NM_172790|Ankrd52|237615|ankyrin repeat domain 52	AK090124|Ankrd52|237615|ankyrin repeat domain 52	AK035533|Ankrd52|237615|ankyrin repeat domain 52	BC117907|Ankrd52|237615|ankyrin repeat domain 52	BC117908|Ankrd52|237615|ankyrin repeat domain 52
mm9_v1_chr4_-_140695648_140695720	6.26788	CUUUGGU	BC066992|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171420|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK027934|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK145912|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171702|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_001025608|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_174996|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed
mm9_v1_chr11_-_65083442_65083498	6.26139	CUUUGGU	AF384055|Myocd|214384|myocardin	AY303755|Myocd|214384|myocardin	NM_145136|Myocd|214384|myocardin	NM_146386|Myocd|214384|myocardin	AK142216|Myocd|214384|myocardin
mm9_v1_chr11_-_74981653_74981653	6.22377	CUUUGGU	NM_001098203|Hic1|15248|hypermethylated in cancer 1
mm9_v1_chr11_+_32247758_32247888	6.22265	CUUUGGU	NM_177364|Sh3pxd2b|268396|SH3 and PX domains 2B	AK169978|Sh3pxd2b|268396|SH3 and PX domains 2B	AK220175|Sh3pxd2b|268396|SH3 and PX domains 2B	AK090119|Sh3pxd2b|268396|SH3 and PX domains 2B	AK042261|Sh3pxd2b|268396|SH3 and PX domains 2B	BC141306|Sh3pxd2b|268396|SH3 and PX domains 2B	AK043324|Sh3pxd2b|268396|SH3 and PX domains 2B	AK089330|Sh3pxd2b|268396|SH3 and PX domains 2B	AK163471|Sh3pxd2b|268396|SH3 and PX domains 2B	AK171384|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115711|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115764|Sh3pxd2b|268396|SH3 and PX domains 2B	AK154898|Sh3pxd2b|268396|SH3 and PX domains 2B	AB430861|Sh3pxd2b|268396|SH3 and PX domains 2B
mm9_v1_chr17_+_56443710_56443735	6.20283	CUUUGGU	AK150489|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	AK151837|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	AK152930|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	AK153083|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	NM_001111078|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	NM_001111080|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1
mm9_v1_chr19_-_24936327_24936331	6.19536	CUUUGGU	AK035507|Pgm5|226041|phosphoglucomutase 5	NM_175013|Pgm5|226041|phosphoglucomutase 5
mm9_v1_chrX_-_71618556_71618610	6.18696	CUUUGGU	EU599043|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599044|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599045|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	BC027440|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	NM_145406|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr7_-_135883942_135884024	6.18075	CUUUGGU	BC038342|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein	NM_145955|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein	BC025641|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein	AK083385|Mcmbp|210711|MCM (minichromosome maintenance deficient) binding protein
mm9_v1_chr8_+_130882920_130882997	6.18009	CUUUGGU	AK082992|Nrp1|18186|neuropilin 1	AK083052|Nrp1|18186|neuropilin 1	AK164378|Nrp1|18186|neuropilin 1	NM_008737|Nrp1|18186|neuropilin 1	BC026730|Nrp1|18186|neuropilin 1	BC032048|Nrp1|18186|neuropilin 1	AK148372|Nrp1|18186|neuropilin 1
mm9_v1_chr6_+_14851348_14851478	6.17786	CUUUGGU	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr3_+_60305108_60305212	6.16699	CUUUGGU	AK162039|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK149405|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AB093240|Mbnl1|56758|muscleblind-like 1 (Drosophila)	NM_020007|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK088871|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK153848|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC060031|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC096600|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr10_-_62801726_62801784	6.121	CUUUGGU	AK140330|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)	BC152314|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)	NM_001159590|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)	AY377984|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)	AF214646|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)	NM_019812|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)	AK144203|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)	NM_001159589|Sirt1|93759|sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae)
mm9_v1_chr4_-_44181148_44181210	5.97732	CUUUGGU	AK044324|Rnf38|73469|ring finger protein 38	NM_001038993|Rnf38|73469|ring finger protein 38	AK147608|Rnf38|73469|ring finger protein 38
mm9_v1_chr4_+_43970559_43970608	5.96413	CUUUGGU	BC031750|Glipr2|384009|GLI pathogenesis-related 2	NM_027450|Glipr2|384009|GLI pathogenesis-related 2	AK167595|Glipr2|384009|GLI pathogenesis-related 2	AK141459|Glipr2|384009|GLI pathogenesis-related 2	AK154433|Glipr2|384009|GLI pathogenesis-related 2	AK089960|Glipr2|384009|GLI pathogenesis-related 2	AK017557|Glipr2|384009|GLI pathogenesis-related 2
mm9_v1_chr15_-_34608458_34608547	5.90778	CUUUGGU	AK033975|Nipal2|223473|NIPA-like domain containing 2	NM_145469|Nipal2|223473|NIPA-like domain containing 2	BC016107|Nipal2|223473|NIPA-like domain containing 2	AK132530|Nipal2|223473|NIPA-like domain containing 2	AK087325|Nipal2|223473|NIPA-like domain containing 2
mm9_v1_chr10_+_126415772_126415772	5.89569	CUUUGGU	BC085142|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	NM_001113470|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chr17_-_44873596_44873596	5.8536	CUUUGGU	D14636|Runx2|12393|runt related transcription factor 2	D14637|Runx2|12393|runt related transcription factor 2	NM_001145920|Runx2|12393|runt related transcription factor 2
mm9_v1_chr12_-_55304834_55304865	5.83415	CUUUGGU	AJ310548|Egln3|112407|EGL nine homolog 3 (C. elegans)	AK044787|Egln3|112407|EGL nine homolog 3 (C. elegans)	NM_028133|Egln3|112407|EGL nine homolog 3 (C. elegans)
mm9_v1_chr11_+_69660115_69660155	5.82824	CUUUGGU	NM_023564|Plscr3|70310|phospholipid scramblase 3	AK011716|Plscr3|70310|phospholipid scramblase 3	AK166288|Plscr3|70310|phospholipid scramblase 3	AK172635|Plscr3|70310|phospholipid scramblase 3
mm9_v1_chr10_-_117283020_117283117	5.80155	CUUUGGU	BC052480|Rap1b|215449|RAS related protein 1b	NM_024457|Rap1b|215449|RAS related protein 1b	AK163242|Rap1b|215449|RAS related protein 1b
mm9_v1_chr4_+_147314951_147315041	5.78814	CUUUGGU	AK011059|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK153761|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	NM_029841|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	BC012878|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK173332|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene
mm9_v1_chr13_+_112476313_112476385	5.78553	CUUUGGU	AK147427|Mier3|218613|mesoderm induction early response 1, family member 3	NM_172593|Mier3|218613|mesoderm induction early response 1, family member 3
mm9_v1_chr4_-_135429750_135429766	5.7752	CUUUGGU	NM_026383|Pnrc2|52830|proline-rich nuclear receptor coactivator 2
mm9_v1_chr5_-_99466008_99466097	5.73854	CUUUGGU	BC113205|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK038739|Prkg2|19092|protein kinase, cGMP-dependent, type II	AK081422|Prkg2|19092|protein kinase, cGMP-dependent, type II	NM_008926|Prkg2|19092|protein kinase, cGMP-dependent, type II
mm9_v1_chr15_+_32850477_32850629	5.69832	CUUUGGU	NM_008304|Sdc2|15529|syndecan 2	U00674|Sdc2|15529|syndecan 2	BC047144|Sdc2|15529|syndecan 2	AK011042|Sdc2|15529|syndecan 2
mm9_v1_chr15_+_7090525_7090548	5.68023	CUUUGGU	D17444|Lifr|16880|leukemia inhibitory factor receptor	D26177|Lifr|16880|leukemia inhibitory factor receptor	S73495|Lifr|16880|leukemia inhibitory factor receptor	S73496|Lifr|16880|leukemia inhibitory factor receptor	NM_013584|Lifr|16880|leukemia inhibitory factor receptor	BC031929|Lifr|16880|leukemia inhibitory factor receptor
mm9_v1_chr10_-_44178474_44178587	5.65258	CUUUGGU	AK133503|Prdm1|12142|PR domain containing 1, with ZNF domain	BC129801|Prdm1|12142|PR domain containing 1, with ZNF domain	NM_007548|Prdm1|12142|PR domain containing 1, with ZNF domain	U08185|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr12_+_77471173_77471252	5.65162	CUUUGGU	AK035036|Zbtb1|268564|zinc finger and BTB domain containing 1	AK049397|Zbtb1|268564|zinc finger and BTB domain containing 1	AY611626|Zbtb1|268564|zinc finger and BTB domain containing 1	NM_178744|Zbtb1|268564|zinc finger and BTB domain containing 1
mm9_v1_chr11_+_95198329_95198359	5.62804	CUUUGGU	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr2_-_126701791_126701996	5.61038	CUUUGGU	BC145122|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	BC150709|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF376052|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK162483|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK014698|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AF149013|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AY032951|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	AK052823|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_001164325|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7	NM_021450|Trpm7|58800|transient receptor potential cation channel, subfamily M, member 7
mm9_v1_chr18_+_14941735_14941757	5.5866	CUUUGGU	AK012135|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001100449|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr3_-_104667319_104667422	5.56067	CUUUGGU	AK161370|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1	NM_009797|Capza1|12340|capping protein (actin filament) muscle Z-line, alpha 1
mm9_v1_chr10_-_127962914_127963016	5.54243	CUUUGGU	BC011482|Esyt1|23943|extended synaptotagmin-like protein 1	NM_011843|Esyt1|23943|extended synaptotagmin-like protein 1	AK044656|Esyt1|23943|extended synaptotagmin-like protein 1	AK088421|Esyt1|23943|extended synaptotagmin-like protein 1	AK080094|Esyt1|23943|extended synaptotagmin-like protein 1	AK152482|Esyt1|23943|extended synaptotagmin-like protein 1	AK152554|Esyt1|23943|extended synaptotagmin-like protein 1
mm9_v1_chr18_+_53624169_53624199	5.5422	CUUUGGU	BC139295|Prdm6|225518|PR domain containing 6	AK133910|Prdm6|225518|PR domain containing 6	NM_001033281|Prdm6|225518|PR domain containing 6
mm9_v1_chr17_-_44951745_44951745	5.51733	CUUUGGU	DQ458792|Runx2|12393|runt related transcription factor 2	NM_001146038|Runx2|12393|runt related transcription factor 2	NM_009820|Runx2|12393|runt related transcription factor 2
mm9_v1_chr1_-_121401236_121401390	5.48968	CUUUGGU	AK159993|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	AF174296|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)	NM_022327|Ralb|64143|v-ral simian leukemia viral oncogene homolog B (ras related)
mm9_v1_chr8_-_122082604_122082665	5.40057	CUUUGGU	AK147336|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC011533|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC057198|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK029048|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK147495|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_001167910|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_019709|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr4_-_134323845_134323948	5.35243	CUUUGGU	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chr14_+_31832323_31832337	5.34982	CUUUGGU	AK165182|Pbrm1|66923|polybromo 1	NM_001081251|Pbrm1|66923|polybromo 1
mm9_v1_chr4_+_46463917_46464167	5.33154	CUUUGGU	AK165807|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC003489|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC005628|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	NM_130889|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC093506|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	AK136648|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	AB025582|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm9_v1_chr4_+_97248556_97248685	5.31772	CUUUGGU	D90173|Nfia|18027|nuclear factor I/A	AK048696|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene	AK139357|Nfia|18027|nuclear factor I/A	NM_001122952|Nfia|18027|nuclear factor I/A	AK051361|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene
mm9_v1_chrX_-_103207106_103207254	5.31339	CUUUGGU	AK144696|Magt1|67075|magnesium transporter 1	AK012185|Magt1|67075|magnesium transporter 1	AK013243|Magt1|67075|magnesium transporter 1	AK136622|Magt1|67075|magnesium transporter 1	BC003881|Magt1|67075|magnesium transporter 1	AK018623|Magt1|67075|magnesium transporter 1	AK010320|Magt1|67075|magnesium transporter 1	DQ000005|Magt1|67075|magnesium transporter 1	NM_001190409|Magt1|67075|magnesium transporter 1	NM_025952|Magt1|67075|magnesium transporter 1
mm9_v1_chrX_-_159326220_159326424	5.27913	CUUUGGU	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr13_+_14046883_14047111	5.27	CUUUGGU	AK044785|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK151677|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK153362|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK035259|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK084275|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK085691|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK134868|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK167635|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	NM_178640|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	BC085110|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK041022|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AB116655|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK144880|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
mm9_v1_chr5_+_36235967_36236084	5.24864	CUUUGGU	BC050814|Afap1|70292|actin filament associated protein 1	NM_027373|Afap1|70292|actin filament associated protein 1	AK161385|Afap1|70292|actin filament associated protein 1	AK080756|Afap1|70292|actin filament associated protein 1	AK129483|Afap1|70292|actin filament associated protein 1	AK147706|Afap1|70292|actin filament associated protein 1
mm9_v1_chr8_-_85856284_85856386	5.24797	CUUUGGU	AK041137|Elmod2|244548|ELMO domain containing 2	AK165222|Elmod2|244548|ELMO domain containing 2	AK036746|Elmod2|244548|ELMO domain containing 2	BC079654|Elmod2|244548|ELMO domain containing 2	AK029044|Elmod2|244548|ELMO domain containing 2	AK036607|Elmod2|244548|ELMO domain containing 2	AK084950|Elmod2|244548|ELMO domain containing 2	NM_001170691|Elmod2|244548|ELMO domain containing 2	NM_178736|Elmod2|244548|ELMO domain containing 2
mm9_v1_chr3_-_104855832_104856063	5.23216	CUUUGGU	BC003236|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK145085|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK051259|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK030438|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK129359|Cttnbp2nl|80281|CTTNBP2 N-terminal like	NM_001163332|Cttnbp2nl|80281|CTTNBP2 N-terminal like	NM_001163333|Cttnbp2nl|80281|CTTNBP2 N-terminal like	AK029901|Cttnbp2nl|80281|CTTNBP2 N-terminal like	NM_030249|Cttnbp2nl|80281|CTTNBP2 N-terminal like
mm9_v1_chr6_-_128093543_128093604	5.21194	CUUUGGU	AK079139|Tspan9|109246|tetraspanin 9	BC052503|Tspan9|109246|tetraspanin 9	AK158729|Tspan9|109246|tetraspanin 9	NM_175414|Tspan9|109246|tetraspanin 9
mm9_v1_chr3_-_27609279_27609407	5.20134	CUUUGGU	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr6_-_39156706_39156787	5.1946	CUUUGGU	AK136238|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	AK042834|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	NM_001033430|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	AK042327|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr11_-_95867076_95867257	5.19434	CUUUGGU	AF061569|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	AK044850|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	AK013940|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	BC051679|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1	NM_009951|Igf2bp1|140486|insulin-like growth factor 2 mRNA binding protein 1
mm9_v1_chr5_-_96590773_96590783	5.14097	CUUUGGU	AK030112|Cnot6l|231464|CCR4-NOT transcription complex, subunit 6-like	NM_178854|Cnot6l|231464|CCR4-NOT transcription complex, subunit 6-like
mm9_v1_chr13_-_112599181_112599204	5.13604	CUUUGGU	AB014614|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	AF117340|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	NM_011945|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1
mm9_v1_chr17_+_56442759_56442848	5.1187	CUUUGGU	NM_001111079|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	NM_010931|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	AK146951|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	AK145543|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	AK147046|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	BC022167|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	AF274046|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1	D87908|Uhrf1|18140|ubiquitin-like, containing PHD and RING finger domains, 1
mm9_v1_chrX_-_163820597_163820686	5.1157	CUUUGGU	AK019169|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK215156|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	BC024942|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK045007|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	NM_026662|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK029690|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2	AK012819|Prps2|110639|phosphoribosyl pyrophosphate synthetase 2
mm9_v1_chr9_-_82869081_82869124	5.11558	CUUUGGU	NM_001081216|Phip|83946|pleckstrin homology domain interacting protein	AK032797|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr4_+_62876389_62876445	5.10102	CUUUGGU	AK157951|Col27a1|373864|collagen, type XXVII, alpha 1	NM_025685|Col27a1|373864|collagen, type XXVII, alpha 1
mm9_v1_chr11_-_20731016_20731238	5.02593	CUUUGGU	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr2_+_71624985_71625139	5.02085	CUUUGGU	AK018033|Itga6|16403|integrin alpha 6	BC049132|Itga6|16403|integrin alpha 6	BC058095|Itga6|16403|integrin alpha 6	X69902|Itga6|16403|integrin alpha 6	AK034186|Itga6|16403|integrin alpha 6	NM_008397|Itga6|16403|integrin alpha 6
mm9_v1_chr13_-_101386865_101386925	5.00975	CUUUGGU	DQ143929|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682659|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682661|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK156238|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_178410|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK133741|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_001038602|Marveld2|218518|MARVEL (membrane-associating) domain containing 2
mm9_v1_chr16_-_32079317_32079415	4.97726	CUUUGGU	BC086650|Pak2|224105|p21 protein (Cdc42/Rac)-activated kinase 2	NM_177326|Pak2|224105|p21 protein (Cdc42/Rac)-activated kinase 2
mm9_v1_chr7_-_28013615_28013697	4.96353	CUUUGGU	BC053450|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C	NM_181593|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C	AK154888|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C	AK051297|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C
mm9_v1_chr4_+_151648348_151648470	4.92674	CUUUGGU	NM_178406|Gpr153|100129|G protein-coupled receptor 153
mm9_v1_chr19_+_40734282_40734322	4.92181	CUUUGGU	AK030601|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	NM_009848|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	BC011278|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	AF037366|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1
mm9_v1_chr10_+_27794625_27794662	4.84228	CUUUGGU	NM_008983|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	AK078614|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	BC138376|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	BC145261|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	AK083006|Ptprk|19272|protein tyrosine phosphatase, receptor type, K
mm9_v1_chr10_+_127176590_127176697	4.83406	CUUUGGU	BC058661|Zbtb39|320080|zinc finger and BTB domain containing 39	NM_198035|Zbtb39|320080|zinc finger and BTB domain containing 39	AK135409|Zbtb39|320080|zinc finger and BTB domain containing 39	AK155700|Zbtb39|320080|zinc finger and BTB domain containing 39	BC079569|Zbtb39|320080|zinc finger and BTB domain containing 39
mm9_v1_chr14_-_46008425_46008617	4.81032	CUUUGGU	BC092047|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	BC031116|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK018499|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK050266|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AJ001006|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	NM_019425|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007722|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK167870|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK168074|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007647|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK008566|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK002466|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK028693|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007764|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK011098|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1
mm9_v1_chr2_-_33286793_33286890	4.79432	CUUUGGU	NM_001085507|Zbtb34|241311|zinc finger and BTB domain containing 34
mm9_v1_chr11_+_70514004_70514162	4.72848	CUUUGGU	AK029250|Kif1c|16562|kinesin family member 1C	NM_153103|Kif1c|16562|kinesin family member 1C	BC029286|Kif1c|16562|kinesin family member 1C	AK173007|Kif1c|16562|kinesin family member 1C
mm9_v1_chr9_+_122026378_122026421	4.6594	CUUUGGU	NM_001164572|Snrk|20623|SNF related kinase	NM_133741|Snrk|20623|SNF related kinase
mm9_v1_chr15_+_81230560_81230633	4.60959	CUUUGGU	AK042110|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	AK158394|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	AK088324|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	NM_177310|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	BC144717|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative	BC137569|Xpnpep3|321003|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
mm9_v1_chr11_+_60745534_60745749	4.60582	CUUUGGU	AK008141|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166255|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167442|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK011002|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK053378|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK150067|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166507|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167209|Map2k3|26397|mitogen-activated protein kinase kinase 3	NM_008928|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK159379|Map2k3|26397|mitogen-activated protein kinase kinase 3	BC007467|Map2k3|26397|mitogen-activated protein kinase kinase 3	D87115|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK168710|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK179609|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK181928|Map2k3|26397|mitogen-activated protein kinase kinase 3
mm9_v1_chr2_-_181022670_181022690	4.57019	CUUUGGU	BC059066|Gmeb2|229004|glucocorticoid modulatory element binding protein 2	NM_198169|Gmeb2|229004|glucocorticoid modulatory element binding protein 2
mm9_v1_chr14_-_80061976_80061977	4.56397	CUUUGGU	NM_010701|Lect1|16840|leukocyte cell derived chemotaxin 1	U43509|Lect1|16840|leukocyte cell derived chemotaxin 1
mm9_v1_chr1_-_135975681_135975731	4.56064	CUUUGGU	BC132259|Btg2|12227|B-cell translocation gene 2, anti-proliferative	BC138639|Btg2|12227|B-cell translocation gene 2, anti-proliferative	AK088976|Btg2|12227|B-cell translocation gene 2, anti-proliferative	AK169436|Btg2|12227|B-cell translocation gene 2, anti-proliferative	AK133796|Btg2|12227|B-cell translocation gene 2, anti-proliferative	AK169269|Btg2|12227|B-cell translocation gene 2, anti-proliferative	NM_007570|Btg2|12227|B-cell translocation gene 2, anti-proliferative
mm9_v1_chr9_-_117161564_117161606	4.55677	CUUUGGU	BC108402|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK052196|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK032938|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK081921|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK051776|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK041098|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172122|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172123|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172124|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172126|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_178660|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr9_-_14419410_14419443	4.5457	CUUUGGU	NM_001081395|Amotl1|75723|angiomotin-like 1
mm9_v1_chr14_+_60244117_60244148	4.54165	CUUUGGU	NM_145463|Shisa2|219134|shisa homolog 2 (Xenopus laevis)	AK034905|Shisa2|219134|shisa homolog 2 (Xenopus laevis)	AK087512|Shisa2|219134|shisa homolog 2 (Xenopus laevis)
mm9_v1_chr19_+_45089665_45089708	4.53687	CUUUGGU	NM_145503|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK169936|Lzts2|226154|leucine zipper, putative tumor suppressor 2	BC092263|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK144154|Lzts2|226154|leucine zipper, putative tumor suppressor 2	NM_001130525|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr16_-_59555577_59555577	4.52633	CUUUGGU	BC043118|Crybg3|224273|beta-gamma crystallin domain containing 3	NM_174848|Crybg3|224273|beta-gamma crystallin domain containing 3
mm9_v1_chr17_-_63230665_63230665	4.52023	CUUUGGU	BC040218|Efna5|13640|ephrin A5	NM_010109|Efna5|13640|ephrin A5	NM_207654|Efna5|13640|ephrin A5
mm9_v1_chr16_+_32332294_32332380	4.50598	CUUUGGU	NM_177633|Ubxn7|224111|UBX domain protein 7	AK147730|Ubxn7|224111|UBX domain protein 7	BC062904|Ubxn7|224111|UBX domain protein 7
mm9_v1_chr3_-_53461276_53461276	4.43759	CUUUGGU	AB236662|Frem2|242022|Fras1 related extracellular matrix protein 2	NM_172862|Frem2|242022|Fras1 related extracellular matrix protein 2
mm9_v1_chr3_+_89324085_89324085	4.43149	CUUUGGU	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr1_-_90598670_90598781	4.42101	CUUUGGU	AK080335|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080380|Arl4c|320982|ADP-ribosylation factor-like 4C	AK080743|Arl4c|320982|ADP-ribosylation factor-like 4C	BC055769|Arl4c|320982|ADP-ribosylation factor-like 4C	NM_177305|Arl4c|320982|ADP-ribosylation factor-like 4C
mm9_v1_chr5_+_115224911_115225148	4.3609	CUUUGGU	AK039432|Ankrd13a|68420|ankyrin repeat domain 13a	AK156539|Ankrd13a|68420|ankyrin repeat domain 13a	BC049187|Ankrd13a|68420|ankyrin repeat domain 13a	BC061692|Ankrd13a|68420|ankyrin repeat domain 13a	NM_026718|Ankrd13a|68420|ankyrin repeat domain 13a
mm9_v1_chr7_-_123586952_123586976	4.33645	CUUUGGU	AK163446|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK049609|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	U52193|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK019194|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK140908|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	NM_011083|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chr6_-_30193802_30193802	4.32888	CUUUGGU	NM_001169577|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr17_+_87362450_87362450	4.3248	CUUUGGU	BC056363|Rhoq|104215|ras homolog gene family, member Q	NM_145491|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr2_-_84555162_84555500	4.32008	CUUUGGU	BC065155|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK082513|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK145086|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK173251|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AY894891|Zdhhc5|228136|zinc finger, DHHC domain containing 5	NM_144887|Zdhhc5|228136|zinc finger, DHHC domain containing 5
mm9_v1_chr3_-_117571853_117571885	4.31992	CUUUGGU	AK038971|Snx7|76561|sorting nexin 7	NM_001190156|Snx7|76561|sorting nexin 7	NM_029655|Snx7|76561|sorting nexin 7
mm9_v1_chr4_+_13678443_13678575	4.30566	CUUUGGU	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr4_-_44180323_44180519	4.29054	CUUUGGU	BC062976|Rnf38|73469|ring finger protein 38	BC060730|Rnf38|73469|ring finger protein 38	NM_175201|Rnf38|73469|ring finger protein 38	AK006888|Rnf38|73469|ring finger protein 38
mm9_v1_chr1_-_84835871_84836168	4.28803	CUUUGGU	AK158807|Trip12|14897|thyroid hormone receptor interactor 12	NM_133975|Trip12|14897|thyroid hormone receptor interactor 12
mm9_v1_chr15_-_77137425_77137482	4.2877	CUUUGGU	AK139555|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110827|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_053104|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_175387|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr12_+_3426883_3427022	4.2844	CUUUGGU	AK080679|Asxl2|75302|additional sex combs like 2 (Drosophila)	NM_172421|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK036839|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK142135|Asxl2|75302|additional sex combs like 2 (Drosophila)	BC141140|Asxl2|75302|additional sex combs like 2 (Drosophila)
mm9_v1_chr5_+_28397902_28397951	4.25448	CUUUGGU	AK135941|Insig1|231070|insulin induced gene 1	AK135989|Insig1|231070|insulin induced gene 1	AK139913|Insig1|231070|insulin induced gene 1	AK151186|Insig1|231070|insulin induced gene 1	AK088380|Insig1|231070|insulin induced gene 1	AF527630|Insig1|231070|insulin induced gene 1	BC132167|Insig1|231070|insulin induced gene 1	BC132499|Insig1|231070|insulin induced gene 1	BC079559|Insig1|231070|insulin induced gene 1	NM_153526|Insig1|231070|insulin induced gene 1
mm9_v1_chr9_+_96159123_96159160	4.24682	CUUUGGU	NM_001184709|Tfdp2|211586|transcription factor Dp 2	AK033356|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr6_-_136610399_136610413	4.24015	CUUUGGU	NM_025806|Plbd1|66857|phospholipase B domain containing 1
mm9_v1_chr11_-_102807774_102807774	4.23601	CUUUGGU	AF095155|C1ql1|23829|complement component 1, q subcomponent-like 1	BC118980|C1ql1|23829|complement component 1, q subcomponent-like 1	NM_011795|C1ql1|23829|complement component 1, q subcomponent-like 1
mm9_v1_chr18_+_67365012_67365154	4.22402	CUUUGGU	NM_024190|Chmp1b|67064|chromatin modifying protein 1B	AK151071|Chmp1b|67064|chromatin modifying protein 1B	AK014091|Chmp1b|67064|chromatin modifying protein 1B	AK012996|Chmp1b|67064|chromatin modifying protein 1B	AK167614|Chmp1b|67064|chromatin modifying protein 1B	BC002229|Chmp1b|67064|chromatin modifying protein 1B	BC034442|Chmp1b|67064|chromatin modifying protein 1B	CT010307|Chmp1b|67064|chromatin modifying protein 1B
mm9_v1_chr17_-_48061577_48061752	4.21751	CUUUGGU	BC057110|Foxp4|74123|forkhead box P4	NM_001110824|Foxp4|74123|forkhead box P4	NM_001110825|Foxp4|74123|forkhead box P4	NM_028767|Foxp4|74123|forkhead box P4
mm9_v1_chr13_+_54723144_54723248	4.15575	CUUUGGU	NM_178397|Faf2|76577|Fas associated factor family member 2	AK170111|Faf2|76577|Fas associated factor family member 2	AK171922|Faf2|76577|Fas associated factor family member 2	AK051724|Faf2|76577|Fas associated factor family member 2	BC046817|Faf2|76577|Fas associated factor family member 2	AK148529|Faf2|76577|Fas associated factor family member 2	AK151617|Faf2|76577|Fas associated factor family member 2	BC048767|Faf2|76577|Fas associated factor family member 2	AK122394|Faf2|76577|Fas associated factor family member 2
mm9_v1_chr15_+_80541675_80541764	4.15294	CUUUGGU	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr10_+_18189773_18189786	4.15235	CUUUGGU	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr2_+_92025639_92025639	4.11724	CUUUGGU	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr12_+_81891479_81891592	4.11701	CUUUGGU	AK030233|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK161132|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK143867|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	BC040401|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	NM_178682|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK151939|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK152820|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK164823|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr6_+_147039596_147039596	4.11	CUUUGGU	NM_001081237|Klhdc5|232539|kelch domain containing 5
mm9_v1_chr2_+_128644032_128644119	4.08179	CUUUGGU	NM_028248|Tmem87b|72477|transmembrane protein 87B	AK050203|Tmem87b|72477|transmembrane protein 87B	AK166991|Tmem87b|72477|transmembrane protein 87B	AK164504|Tmem87b|72477|transmembrane protein 87B	AK171811|Tmem87b|72477|transmembrane protein 87B	AK172611|Tmem87b|72477|transmembrane protein 87B	BC031488|Tmem87b|72477|transmembrane protein 87B	AK011959|Tmem87b|72477|transmembrane protein 87B
mm9_v1_chrX_-_92640149_92640178	4.08168	CUUUGGU	BC053442|Fam123b|72345|family with sequence similarity 123, member B	AK012651|Fam123b|72345|family with sequence similarity 123, member B	AK049774|Fam123b|72345|family with sequence similarity 123, member B	NM_175179|Fam123b|72345|family with sequence similarity 123, member B
mm9_v1_chr11_-_40568710_40568789	4.07813	CUUUGGU	AK167486|Ccng1|12450|cyclin G1	AK159429|Ccng1|12450|cyclin G1	AK153392|Ccng1|12450|cyclin G1	AK167052|Ccng1|12450|cyclin G1	AK159831|Ccng1|12450|cyclin G1	L49507|Ccng1|12450|cyclin G1	Z37110|Ccng1|12450|cyclin G1	AK160411|Ccng1|12450|cyclin G1	AK128957|Ccng1|12450|cyclin G1	AK147026|Ccng1|12450|cyclin G1	AK170397|Ccng1|12450|cyclin G1	AK143114|Ccng1|12450|cyclin G1	NM_009831|Ccng1|12450|cyclin G1
mm9_v1_chr14_+_31292750_31292775	4.06538	CUUUGGU	AJ344447|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	NM_133761|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr10_+_128242649_128242744	4.02441	CUUUGGU	AK159388|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK083878|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK032681|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK017830|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK082579|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	NM_028873|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr15_+_66409094_66409201	4.01351	CUUUGGU	AK047044|Phf20l1|239510|PHD finger protein 20-like 1	AK032638|Phf20l1|239510|PHD finger protein 20-like 1	NM_001081409|Phf20l1|239510|PHD finger protein 20-like 1	BC082777|Phf20l1|239510|PHD finger protein 20-like 1	BC052212|Phf20l1|239510|PHD finger protein 20-like 1	BC061492|Phf20l1|239510|PHD finger protein 20-like 1
mm9_v1_chr11_-_86621130_86621161	4.01206	CUUUGGU	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr2_-_102026486_102026616	3.99729	CUUUGGU	AK032208|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	AK029683|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	NM_178886|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138178|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC145174|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3	BC138177|Ldlrad3|241576|low density lipoprotein receptor class A domain containing 3
mm9_v1_chr3_+_95908422_95908559	3.98832	CUUUGGU	AK044701|Otud7b|229603|OTU domain containing 7B	NM_001025613|Otud7b|229603|OTU domain containing 7B	NM_001025614|Otud7b|229603|OTU domain containing 7B	AK078327|Otud7b|229603|OTU domain containing 7B	BC141397|Otud7b|229603|OTU domain containing 7B	BC141398|Otud7b|229603|OTU domain containing 7B
mm9_v1_chr2_-_90910332_90910406	3.96644	CUUUGGU	BC125525|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC137752|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK035296|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	NM_026721|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	BC020106|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13	AK156951|Slc39a13|68427|solute carrier family 39 (metal ion transporter), member 13
mm9_v1_chr18_-_80666366_80666458	3.91221	CUUUGGU	BC053435|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	NM_026295|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	AK044530|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	AK156617|Ctdp1|67655|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
mm9_v1_chr7_-_35174519_35174695	3.89933	CUUUGGU	BC031521|Lsm14a|67070|LSM14 homolog A (SCD6, S. cerevisiae)	NM_025948|Lsm14a|67070|LSM14 homolog A (SCD6, S. cerevisiae)
mm9_v1_chr7_+_46843887_46843887	3.89914	CUUUGGU	NM_001170345|Gm2058|100039133|predicted gene 2058
mm9_v1_chr4_+_61947463_61947577	3.87202	CUUUGGU	NM_025286|Slc31a2|20530|solute carrier family 31, member 2	AK008473|Slc31a2|20530|solute carrier family 31, member 2	BC099447|Slc31a2|20530|solute carrier family 31, member 2	AK007579|Slc31a2|20530|solute carrier family 31, member 2	AK152812|Slc31a2|20530|solute carrier family 31, member 2	AK003269|Slc31a2|20530|solute carrier family 31, member 2	AK151612|Slc31a2|20530|solute carrier family 31, member 2	BC029183|Slc31a2|20530|solute carrier family 31, member 2
mm9_v1_chr2_+_4073908_4073934	3.84838	CUUUGGU	NM_172475|Frmd4a|209630|FERM domain containing 4A	AK034706|Frmd4a|209630|FERM domain containing 4A	BC058672|Frmd4a|209630|FERM domain containing 4A	AK163887|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr16_-_98144201_98144247	3.80406	CUUUGGU	AK077731|C2cd2|207781|C2 calcium-dependent domain containing 2	BC043688|C2cd2|207781|C2 calcium-dependent domain containing 2	AK017896|C2cd2|207781|C2 calcium-dependent domain containing 2	AK143875|C2cd2|207781|C2 calcium-dependent domain containing 2	AK220454|C2cd2|207781|C2 calcium-dependent domain containing 2	AK086520|C2cd2|207781|C2 calcium-dependent domain containing 2	NM_174847|C2cd2|207781|C2 calcium-dependent domain containing 2
mm9_v1_chrX_+_133584130_133584209	3.79739	CUUUGGU	AK154624|Fam199x|245622|family with sequence similarity 199, X-linked	NM_146261|Fam199x|245622|family with sequence similarity 199, X-linked	BC031748|Fam199x|245622|family with sequence similarity 199, X-linked	AK039695|Fam199x|245622|family with sequence similarity 199, X-linked
mm9_v1_chr9_-_79566271_79566499	3.79616	CUUUGGU	U25652|Col12a1|12816|collagen, type XII, alpha 1	NM_007730|Col12a1|12816|collagen, type XII, alpha 1
mm9_v1_chr9_-_115219520_115219538	3.78379	CUUUGGU	BC052433|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	NM_024222|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr17_+_14416508_14416565	3.78158	CUUUGGU	NM_022315|Smoc2|64074|SPARC related modular calcium binding 2	AJ249901|Smoc2|64074|SPARC related modular calcium binding 2	AK030958|Smoc2|64074|SPARC related modular calcium binding 2	AK159749|Smoc2|64074|SPARC related modular calcium binding 2	AK160002|Smoc2|64074|SPARC related modular calcium binding 2	AK172312|Smoc2|64074|SPARC related modular calcium binding 2	AK040109|Smoc2|64074|SPARC related modular calcium binding 2	BC019527|Smoc2|64074|SPARC related modular calcium binding 2
mm9_v1_chr5_-_96590868_96591008	3.7739	CUUUGGU	BC018506|Cnot6l|231464|CCR4-NOT transcription complex, subunit 6-like	NM_144910|Cnot6l|231464|CCR4-NOT transcription complex, subunit 6-like
mm9_v1_chr17_+_4995073_4995073	3.76556	CUUUGGU	NM_001085355|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr5_+_123844794_123844938	3.72436	CUUUGGU	AK047475|Mlxip|208104|MLX interacting protein	NM_133917|Mlxip|208104|MLX interacting protein	NM_177582|Mlxip|208104|MLX interacting protein	BC137770|Mlxip|208104|MLX interacting protein	AY968204|Mlxip|208104|MLX interacting protein
mm9_v1_chr1_-_130488785_130488878	3.72021	CUUUGGU	Z80112|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	U59760|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	BC098322|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	AB000803|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	BC031665|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	Z80111|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	NM_009911|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	X99582|Cxcr4|12767|chemokine (C-X-C motif) receptor 4
mm9_v1_chr15_+_80629020_80629144	3.71723	CUUUGGU	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chrX_-_48371127_48371236	3.71595	CUUUGGU	AK087971|Rap2c|72065|RAP2C, member of RAS oncogene family	BC050056|Rap2c|72065|RAP2C, member of RAS oncogene family	BC027363|Rap2c|72065|RAP2C, member of RAS oncogene family	AK146057|Rap2c|72065|RAP2C, member of RAS oncogene family	BC064814|Rap2c|72065|RAP2C, member of RAS oncogene family	BC094890|Rap2c|72065|RAP2C, member of RAS oncogene family	NM_172413|Rap2c|72065|RAP2C, member of RAS oncogene family	AK146956|Rap2c|72065|RAP2C, member of RAS oncogene family	AK147015|Rap2c|72065|RAP2C, member of RAS oncogene family
mm9_v1_chr2_-_26359261_26359353	3.70345	CUUUGGU	AK090118|Notch1|18128|Notch gene homolog 1 (Drosophila)	NM_008714|Notch1|18128|Notch gene homolog 1 (Drosophila)
mm9_v1_chr10_-_12581443_12581532	3.69753	CUUUGGU	Y12229|Utrn|22288|utrophin	NM_011682|Utrn|22288|utrophin
mm9_v1_chr13_-_46060325_46060353	3.69166	CUUUGGU	BC058178|Atxn1|20238|ataxin 1	AK048268|Atxn1|20238|ataxin 1	NM_009124|Atxn1|20238|ataxin 1	AK169931|Atxn1|20238|ataxin 1
mm9_v1_chr3_+_106350707_106350756	3.68909	CUUUGGU	NM_001025582|Dram2|67171|VDNA-damage regulated autophagy modulator 2	NM_026013|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK015888|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK172455|Dram2|67171|VDNA-damage regulated autophagy modulator 2
mm9_v1_chr8_+_97876182_97876236	3.64063	CUUUGGU	BC047278|Mmp15|17388|matrix metallopeptidase 15	NM_008609|Mmp15|17388|matrix metallopeptidase 15
mm9_v1_chr7_+_73254341_73254400	3.63426	CUUUGGU	AK129255|Chsy1|269941|chondroitin sulfate synthase 1	BC128567|Chsy1|269941|chondroitin sulfate synthase 1	BC153826|Chsy1|269941|chondroitin sulfate synthase 1	BC153827|Chsy1|269941|chondroitin sulfate synthase 1	NM_001081163|Chsy1|269941|chondroitin sulfate synthase 1
mm9_v1_chr6_+_47827535_47827591	3.62854	CUUUGGU	NM_146175|Zfp282|101095|zinc finger protein 282	AK088531|Zfp282|101095|zinc finger protein 282	AK148038|Zfp282|101095|zinc finger protein 282
mm9_v1_chr15_-_35085306_35085560	3.62809	CUUUGGU	AF271361|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	BC049123|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	U28726|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	AY058922|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	BC037440|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	NM_019635|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)
mm9_v1_chr11_+_57822347_57822565	3.61782	CUUUGGU	NM_028451|Larp1|73158|La ribonucleoprotein domain family, member 1
mm9_v1_chr11_-_97049185_97049278	3.61348	CUUUGGU	BC055115|Kpnb1|16211|karyopherin (importin) beta 1	AK077709|Kpnb1|16211|karyopherin (importin) beta 1	NM_008379|Kpnb1|16211|karyopherin (importin) beta 1	AK147175|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr16_+_94791713_94791812	3.57489	CUUUGGU	NM_007890|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr10_+_79957650_79957698	3.56682	CUUUGGU	BC058700|Onecut3|246086|one cut domain, family member 3	NM_139226|Onecut3|246086|one cut domain, family member 3	AY080897|Onecut3|246086|one cut domain, family member 3
mm9_v1_chr19_-_41338400_41338559	3.56451	CUUUGGU	AF269151|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK075807|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK220279|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK147380|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK147629|Tm9sf3|107358|transmembrane 9 superfamily member 3	NM_133352|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr2_+_27532692_27532866	3.5542	CUUUGGU	AK144675|Rxra|20181|retinoid X receptor alpha	NM_011305|Rxra|20181|retinoid X receptor alpha	M84817|Rxra|20181|retinoid X receptor alpha	BC138800|Rxra|20181|retinoid X receptor alpha	BC138802|Rxra|20181|retinoid X receptor alpha	X66223|Rxra|20181|retinoid X receptor alpha	AK031034|Rxra|20181|retinoid X receptor alpha
mm9_v1_chr3_+_109143558_109143678	3.536	CUUUGGU	AK033253|Vav3|57257|vav 3 oncogene	NM_020505|Vav3|57257|vav 3 oncogene	AK041249|Vav3|57257|vav 3 oncogene
mm9_v1_chr1_-_158869650_158869756	3.51359	CUUUGGU	BC043132|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	BC052663|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK169368|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK018622|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029049|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK033549|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK161080|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK029993|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	AK036803|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159965|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159967|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159968|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_023884|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr9_+_83441886_83441956	3.49624	CUUUGGU	AK032092|Sh3bgrl2|212531|SH3 domain binding glutamic acid-rich protein like 2	NM_172507|Sh3bgrl2|212531|SH3 domain binding glutamic acid-rich protein like 2	AK029392|Sh3bgrl2|212531|SH3 domain binding glutamic acid-rich protein like 2	AK076202|Sh3bgrl2|212531|SH3 domain binding glutamic acid-rich protein like 2	AK160357|Sh3bgrl2|212531|SH3 domain binding glutamic acid-rich protein like 2
mm9_v1_chr3_-_89767429_89767429	3.4762	CUUUGGU	NM_001081182|Atp8b2|54667|ATPase, class I, type 8B, member 2
mm9_v1_chr12_+_106923552_106923650	3.45227	CUUUGGU	NM_178613|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK171097|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	BC031494|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK168962|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK042664|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK079775|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK020785|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK029484|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene
mm9_v1_chr18_-_82862111_82862127	3.44327	CUUUGGU	BC138187|Zfp236|329002|zinc finger protein 236	BC145179|Zfp236|329002|zinc finger protein 236	BC145180|Zfp236|329002|zinc finger protein 236	NM_177832|Zfp236|329002|zinc finger protein 236
mm9_v1_chr9_-_43013831_43013943	3.42973	CUUUGGU	Z18537|Pou2f3|18988|POU domain, class 2, transcription factor 3	L14677|Pou2f3|18988|POU domain, class 2, transcription factor 3	NM_011139|Pou2f3|18988|POU domain, class 2, transcription factor 3
mm9_v1_chr19_+_46647844_46647860	3.42388	CUUUGGU	AK162407|Sfxn2|94279|sideroflexin 2	NM_053196|Sfxn2|94279|sideroflexin 2	AK034875|Sfxn2|94279|sideroflexin 2	BC019808|Sfxn2|94279|sideroflexin 2
mm9_v1_chr4_-_87452140_87452217	3.39582	CUUUGGU	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr2_+_4322020_4322021	3.39332	CUUUGGU	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr10_-_6373388_6373465	3.34982	CUUUGGU	AK075931|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK160025|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK036284|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK028211|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK038579|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170785|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170786|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_172308|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr16_+_92058498_92058582	3.34127	CUUUGGU	AK165590|Mrps6|121022|mitochondrial ribosomal protein S6	AB049943|Mrps6|121022|mitochondrial ribosomal protein S6	AY061856|Mrps6|121022|mitochondrial ribosomal protein S6	AK144718|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK166374|Mrps6|121022|mitochondrial ribosomal protein S6	AK167304|Mrps6|121022|mitochondrial ribosomal protein S6	NM_017391|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK167316|Mrps6|121022|mitochondrial ribosomal protein S6	BC027271|Mrps6|121022|mitochondrial ribosomal protein S6	NM_080456|Mrps6|121022|mitochondrial ribosomal protein S6
mm9_v1_chr9_-_123760686_123760944	3.30792	CUUUGGU	AJ428065|Fyco1|17281|FYVE and coiled-coil domain containing 1	NM_148925|Fyco1|17281|FYVE and coiled-coil domain containing 1	BC053712|Fyco1|17281|FYVE and coiled-coil domain containing 1
mm9_v1_chr4_-_82151180_82151288	3.29935	CUUUGGU	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr9_-_77391865_77391878	3.27975	CUUUGGU	AK082721|Lrrc1|214345|leucine rich repeat containing 1	NM_172528|Lrrc1|214345|leucine rich repeat containing 1	AK053293|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr5_+_76569257_76569352	3.23045	CUUUGGU	AK075635|Srd5a3|57357|steroid 5 alpha-reductase 3	AK139290|Srd5a3|57357|steroid 5 alpha-reductase 3	BC145647|Srd5a3|57357|steroid 5 alpha-reductase 3	NM_020611|Srd5a3|57357|steroid 5 alpha-reductase 3	AK138681|Srd5a3|57357|steroid 5 alpha-reductase 3	BC014771|Srd5a3|57357|steroid 5 alpha-reductase 3	AK040198|Srd5a3|57357|steroid 5 alpha-reductase 3	AK162527|Srd5a3|57357|steroid 5 alpha-reductase 3	BC039564|Srd5a3|57357|steroid 5 alpha-reductase 3
mm9_v1_chr7_+_138009310_138009466	3.2284	CUUUGGU	AK053879|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	AK083340|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	AK044224|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	BC020017|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	NM_133942|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm9_v1_chr5_+_130695613_130695613	3.22231	CUUUGGU	NM_001081394|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene
mm9_v1_chr2_+_4480799_4480871	3.21727	CUUUGGU	AK077327|Frmd4a|209630|FERM domain containing 4A	NM_001177844|Frmd4a|209630|FERM domain containing 4A	AK148414|Frmd4a|209630|FERM domain containing 4A	AK029073|Frmd4a|209630|FERM domain containing 4A	AK171532|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr11_+_53583515_53583660	3.20773	CUUUGGU	NM_001159393|Irf1|16362|interferon regulatory factor 1	NM_008390|Irf1|16362|interferon regulatory factor 1	AK152005|Irf1|16362|interferon regulatory factor 1	AK152193|Irf1|16362|interferon regulatory factor 1	AK153514|Irf1|16362|interferon regulatory factor 1	AK155983|Irf1|16362|interferon regulatory factor 1	AK152104|Irf1|16362|interferon regulatory factor 1	AK157347|Irf1|16362|interferon regulatory factor 1	M21065|Irf1|16362|interferon regulatory factor 1	AY225160|Irf1|16362|interferon regulatory factor 1
mm9_v1_chr11_-_99092319_99092333	3.19779	CUUUGGU	BC065043|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	NM_020618|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm9_v1_chr6_+_52263491_52263491	3.19736	CUUUGGU	NM_007966|Evx1|14028|even skipped homeotic gene 1 homolog	X54239|Evx1|14028|even skipped homeotic gene 1 homolog
mm9_v1_chr18_-_44821919_44821954	3.19598	CUUUGGU	AK054528|Mcc|328949|mutated in colorectal cancers	NM_001085374|Mcc|328949|mutated in colorectal cancers	AK086823|Mcc|328949|mutated in colorectal cancers
mm9_v1_chr5_-_115223373_115223529	3.19588	CUUUGGU	AF148693|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK005365|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK017943|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC043062|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC056993|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077360|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_019834|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK220323|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077359|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK148029|Git2|26431|G protein-coupled receptor kinase-interactor 2
mm9_v1_chr9_+_56919839_56919849	3.1942	CUUUGGU	NM_001110351|Sin3a|20466|transcriptional regulator, SIN3A (yeast)
mm9_v1_chr3_+_5218545_5218658	3.1938	CUUUGGU	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr3_+_95238292_95238339	3.16704	CUUUGGU	AK040475|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_001037737|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_009709|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK028546|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK153355|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK152473|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr19_+_59335367_59335452	3.16147	CUUUGGU	NM_172523|Slc18a2|214084|solute carrier family 18 (vesicular monoamine), member 2	AK035644|Slc18a2|214084|solute carrier family 18 (vesicular monoamine), member 2	AK033871|Slc18a2|214084|solute carrier family 18 (vesicular monoamine), member 2	AK041274|Slc18a2|214084|solute carrier family 18 (vesicular monoamine), member 2	AK034368|Slc18a2|214084|solute carrier family 18 (vesicular monoamine), member 2	BC078449|Slc18a2|214084|solute carrier family 18 (vesicular monoamine), member 2
mm9_v1_chr1_-_145549758_145549813	3.16008	CUUUGGU	BC031127|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_145991|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr4_+_124743933_124743973	3.15525	CUUUGGU	AK010794|Snip1|76793|Smad nuclear interacting protein 1	AK040571|Snip1|76793|Smad nuclear interacting protein 1	AK049254|Snip1|76793|Smad nuclear interacting protein 1	AK049318|Snip1|76793|Smad nuclear interacting protein 1	AK143801|Snip1|76793|Smad nuclear interacting protein 1	NM_175246|Snip1|76793|Smad nuclear interacting protein 1	AK078163|Snip1|76793|Smad nuclear interacting protein 1	AK132768|Snip1|76793|Smad nuclear interacting protein 1	BC064067|Snip1|76793|Smad nuclear interacting protein 1
mm9_v1_chr4_-_133574655_133574730	3.15343	CUUUGGU	AB221669|Lin28a|83557|lin-28 homolog A (C. elegans)	BC068304|Lin28a|83557|lin-28 homolog A (C. elegans)	AF521097|Lin28a|83557|lin-28 homolog A (C. elegans)	NM_145833|Lin28a|83557|lin-28 homolog A (C. elegans)
mm9_v1_chr3_-_79371600_79371778	3.14851	CUUUGGU	NM_001162999|Fnip2|329679|folliculin interacting protein 2
mm9_v1_chr15_-_75900118_75900213	3.14	CUUUGGU	BC060689|Scrib|105782|scribbled homolog (Drosophila)	BC062888|Scrib|105782|scribbled homolog (Drosophila)	AF441233|Scrib|105782|scribbled homolog (Drosophila)	NM_134089|Scrib|105782|scribbled homolog (Drosophila)	AK122211|Scrib|105782|scribbled homolog (Drosophila)
mm9_v1_chr17_+_78599556_78599594	3.11988	CUUUGGU	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr13_-_104710374_104710739	3.11839	CUUUGGU	BC141178|Erbb2ip|59079|Erbb2 interacting protein	BC141188|Erbb2ip|59079|Erbb2 interacting protein	BC145498|Erbb2ip|59079|Erbb2 interacting protein	BC145509|Erbb2ip|59079|Erbb2 interacting protein	AK169529|Erbb2ip|59079|Erbb2 interacting protein	NM_001005868|Erbb2ip|59079|Erbb2 interacting protein	NM_021563|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr4_-_129852325_129852365	3.09375	CUUUGGU	AK185091|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	AB047402|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	NM_023476|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1
mm9_v1_chr12_-_105990160_105990320	3.09371	CUUUGGU	BC019805|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)	AF430845|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)	NM_148948|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)
mm9_v1_chr14_-_56254424_56254541	3.08617	CUUUGGU	AK202276|Ipo4|75751|importin 4	AF123388|Ipo4|75751|importin 4	AK018399|Ipo4|75751|importin 4	AK147086|Ipo4|75751|importin 4	AK142138|Ipo4|75751|importin 4	BC075690|Ipo4|75751|importin 4	AK171031|Ipo4|75751|importin 4	NM_024267|Ipo4|75751|importin 4	AK030490|Ipo4|75751|importin 4
mm9_v1_chr11_+_68781623_68781690	3.07337	CUUUGGU	AK171131|Slc25a35|71998|solute carrier family 25, member 35	AK007453|Slc25a35|71998|solute carrier family 25, member 35	NM_028048|Slc25a35|71998|solute carrier family 25, member 35	AK157873|Slc25a35|71998|solute carrier family 25, member 35	AK035739|Slc25a35|71998|solute carrier family 25, member 35	BC019996|Slc25a35|71998|solute carrier family 25, member 35
mm9_v1_chr14_-_69903072_69903169	3.07217	CUUUGGU	AF288621|Slc25a37|67712|solute carrier family 25, member 37	AF361699|Slc25a37|67712|solute carrier family 25, member 37	AK050414|Slc25a37|67712|solute carrier family 25, member 37	NM_026331|Slc25a37|67712|solute carrier family 25, member 37	AK006155|Slc25a37|67712|solute carrier family 25, member 37
mm9_v1_chr2_+_162757228_162757280	3.07141	CUUUGGU	NM_026499|Srsf6|67996|serine/arginine-rich splicing factor 6	AK004831|Srsf6|67996|serine/arginine-rich splicing factor 6	AK133872|Srsf6|67996|serine/arginine-rich splicing factor 6	AK171709|Srsf6|67996|serine/arginine-rich splicing factor 6	AK146293|Srsf6|67996|serine/arginine-rich splicing factor 6	AK159519|Srsf6|67996|serine/arginine-rich splicing factor 6	BC012039|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr4_-_129852030_129852047	3.06421	CUUUGGU	BC018539|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	AK040827|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	AK087142|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1	NM_001168333|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1
mm9_v1_chr1_-_158869401_158869517	3.06308	CUUUGGU	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr7_-_26573483_26573751	3.06243	CUUUGGU	AK186931|Axl|26362|AXL receptor tyrosine kinase	X63535|Axl|26362|AXL receptor tyrosine kinase	BC050914|Axl|26362|AXL receptor tyrosine kinase	BC046618|Axl|26362|AXL receptor tyrosine kinase	AK155567|Axl|26362|AXL receptor tyrosine kinase	BC058230|Axl|26362|AXL receptor tyrosine kinase	AK170897|Axl|26362|AXL receptor tyrosine kinase	AK033237|Axl|26362|AXL receptor tyrosine kinase	AK170010|Axl|26362|AXL receptor tyrosine kinase	NM_001190974|Axl|26362|AXL receptor tyrosine kinase	NM_001190975|Axl|26362|AXL receptor tyrosine kinase	NM_009465|Axl|26362|AXL receptor tyrosine kinase
mm9_v1_chr13_-_49311308_49311436	3.05939	CUUUGGU	BC147073|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	BC147074|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	AK154517|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	AK003526|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene	NM_026738|1110007C09Rik|68480|RIKEN cDNA 1110007C09 gene
mm9_v1_chr11_+_94981430_94981448	3.03572	CUUUGGU	NM_010055|Dlx3|13393|distal-less homeobox 3	BC058852|Dlx3|13393|distal-less homeobox 3
mm9_v1_chr4_+_108292534_108292631	3.02805	CUUUGGU	AK146601|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	AK043839|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	NM_177045|Cc2d1b|319965|coiled-coil and C2 domain containing 1B	AK148162|Cc2d1b|319965|coiled-coil and C2 domain containing 1B
mm9_v1_chr18_+_75979831_75979868	3.00417	CUUUGGU	BC070424|Zbtb7c|207259|zinc finger and BTB domain containing 7C	NM_145356|Zbtb7c|207259|zinc finger and BTB domain containing 7C	AK045522|Zbtb7c|207259|zinc finger and BTB domain containing 7C
mm9_v1_chr12_+_70473032_70473193	2.98936	CUUUGGU	BC083112|Arf6|11845|ADP-ribosylation factor 6	NM_007481|Arf6|11845|ADP-ribosylation factor 6	AK156960|Arf6|11845|ADP-ribosylation factor 6	BC003478|Arf6|11845|ADP-ribosylation factor 6	D87903|Arf6|11845|ADP-ribosylation factor 6
mm9_v1_chr13_-_81849941_81850044	2.98778	CUUUGGU	BC066818|Polr3g|67486|polymerase (RNA) III (DNA directed) polypeptide G	BC030063|Polr3g|67486|polymerase (RNA) III (DNA directed) polypeptide G	AK009045|Polr3g|67486|polymerase (RNA) III (DNA directed) polypeptide G	AK009876|Polr3g|67486|polymerase (RNA) III (DNA directed) polypeptide G	AK010126|Polr3g|67486|polymerase (RNA) III (DNA directed) polypeptide G	AK166165|Polr3g|67486|polymerase (RNA) III (DNA directed) polypeptide G	NM_001081176|Polr3g|67486|polymerase (RNA) III (DNA directed) polypeptide G
mm9_v1_chr13_+_89680240_89680277	2.98358	CUUUGGU	AK032750|Hapln1|12950|hyaluronan and proteoglycan link protein 1	NM_013500|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr6_+_146673451_146673548	2.9658	CUUUGGU	NM_172734|Stk38l|232533|serine/threonine kinase 38 like	AK052288|Stk38l|232533|serine/threonine kinase 38 like	AK045971|Stk38l|232533|serine/threonine kinase 38 like	AY223819|Stk38l|232533|serine/threonine kinase 38 like
mm9_v1_chr6_+_140571183_140571183	2.9617	CUUUGGU	AK029011|Aebp2|11569|AE binding protein 2	NM_178803|Aebp2|11569|AE binding protein 2
mm9_v1_chr9_+_72380046_72380064	2.94769	CUUUGGU	AK090370|Rfx7|319758|regulatory factor X, 7	NM_001033536|Rfx7|319758|regulatory factor X, 7	AK144999|Rfx7|319758|regulatory factor X, 7
mm9_v1_chr9_+_108957402_108957503	2.93192	CUUUGGU	AK081060|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK020877|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK018291|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	NM_026381|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC057089|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC017600|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chr2_+_153171730_153171874	2.92795	CUUUGGU	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr7_+_148653250_148653309	2.91671	CUUUGGU	NM_001111049|Cd151|12476|CD151 antigen	NM_009842|Cd151|12476|CD151 antigen	D89290|Cd151|12476|CD151 antigen
mm9_v1_chr5_+_147043131_147043250	2.90564	CUUUGGU	NM_153599|Cdk8|264064|cyclin-dependent kinase 8
mm9_v1_chr18_+_9212853_9212853	2.89656	CUUUGGU	BC132543|Fzd8|14370|frizzled homolog 8 (Drosophila)	BC138062|Fzd8|14370|frizzled homolog 8 (Drosophila)	NM_008058|Fzd8|14370|frizzled homolog 8 (Drosophila)
mm9_v1_chr19_-_3575695_3575758	2.89212	CUUUGGU	AK129392|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK088526|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	BC008529|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK035236|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK015925|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	AK018652|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	NM_001164159|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	NM_028999|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3	NM_029456|Ppp6r3|52036|protein phosphatase 6, regulatory subunit 3
mm9_v1_chr2_-_34769479_34769559	2.88249	CUUUGGU	BC027776|Phf19|74016|PHD finger protein 19	AK014380|Phf19|74016|PHD finger protein 19	NM_028716|Phf19|74016|PHD finger protein 19	AK014030|Phf19|74016|PHD finger protein 19
mm9_v1_chr11_-_51670897_51671154	2.88158	CUUUGGU	AK147453|Phf15|76901|PHD finger protein 15	AK129097|Phf15|76901|PHD finger protein 15	NM_199299|Phf15|76901|PHD finger protein 15	AK004823|Phf15|76901|PHD finger protein 15
mm9_v1_chr16_-_65562921_65563010	2.85496	CUUUGGU	AK084111|Chmp2b|68942|chromatin modifying protein 2B	NM_026879|Chmp2b|68942|chromatin modifying protein 2B	BC055809|Chmp2b|68942|chromatin modifying protein 2B
mm9_v1_chr1_+_122499031_122499257	2.85116	CUUUGGU	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chr15_-_38008565_38008625	2.82257	CUUUGGU	NM_001081359|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5	NM_001112721|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chr15_-_50721552_50721725	2.82003	CUUUGGU	BC099962|Trps1|83925|trichorhinophalangeal syndrome I (human)	AF346836|Trps1|83925|trichorhinophalangeal syndrome I (human)	NM_032000|Trps1|83925|trichorhinophalangeal syndrome I (human)
mm9_v1_chr19_+_16510156_16510251	2.81265	CUUUGGU	NM_008137|Gna14|14675|guanine nucleotide binding protein, alpha 14	AK085444|Gna14|14675|guanine nucleotide binding protein, alpha 14
mm9_v1_chr9_-_77392505_77392711	2.80028	CUUUGGU	BC087542|Lrrc1|214345|leucine rich repeat containing 1	AK079854|Lrrc1|214345|leucine rich repeat containing 1	BC046591|Lrrc1|214345|leucine rich repeat containing 1	AK051043|Lrrc1|214345|leucine rich repeat containing 1	AK147075|Lrrc1|214345|leucine rich repeat containing 1	NM_001146048|Lrrc1|214345|leucine rich repeat containing 1	AK220166|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr8_-_112486020_112486104	2.798	CUUUGGU	AK007346|Marveld3|73608|MARVEL (membrane-associating) domain containing 3	BC025851|Marveld3|73608|MARVEL (membrane-associating) domain containing 3	NM_028584|Marveld3|73608|MARVEL (membrane-associating) domain containing 3	NM_212447|Marveld3|73608|MARVEL (membrane-associating) domain containing 3
mm9_v1_chr4_+_97444312_97444317	2.78268	CUUUGGU	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr3_+_96500294_96500403	2.72376	CUUUGGU	NM_146135|Pias3|229615|protein inhibitor of activated STAT 3	AK040619|Pias3|229615|protein inhibitor of activated STAT 3	AK077551|Pias3|229615|protein inhibitor of activated STAT 3	AK085503|Pias3|229615|protein inhibitor of activated STAT 3	BC023128|Pias3|229615|protein inhibitor of activated STAT 3
mm9_v1_chr11_-_52095745_52095751	2.72029	CUUUGGU	BC138596|Tcf7|21414|transcription factor 7, T-cell specific	BC145343|Tcf7|21414|transcription factor 7, T-cell specific	AK037616|Tcf7|21414|transcription factor 7, T-cell specific	NM_009331|Tcf7|21414|transcription factor 7, T-cell specific
mm9_v1_chr2_-_93174606_93174694	2.70486	CUUUGGU	BC052169|Tspan18|241556|tetraspanin 18	AK042573|Tspan18|241556|tetraspanin 18	NM_183180|Tspan18|241556|tetraspanin 18	AK011742|Tspan18|241556|tetraspanin 18
mm9_v1_chr9_+_108941083_108941178	2.70227	CUUUGGU	AF520699|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK150460|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK151632|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	BC010238|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK033545|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK009225|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	NM_025858|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK090373|Shisa5|66940|shisa homolog 5 (Xenopus laevis)	AK045368|Shisa5|66940|shisa homolog 5 (Xenopus laevis)
mm9_v1_chr16_+_27388907_27389196	2.69056	CUUUGGU	BC144895|Ccdc50|67501|coiled-coil domain containing 50	BC144898|Ccdc50|67501|coiled-coil domain containing 50	BC145933|Ccdc50|67501|coiled-coil domain containing 50	BC145935|Ccdc50|67501|coiled-coil domain containing 50	NM_001025615|Ccdc50|67501|coiled-coil domain containing 50	NM_026202|Ccdc50|67501|coiled-coil domain containing 50	AK162434|Ccdc50|67501|coiled-coil domain containing 50	AK016827|Ccdc50|67501|coiled-coil domain containing 50	AK151672|Ccdc50|67501|coiled-coil domain containing 50	AK147820|Ccdc50|67501|coiled-coil domain containing 50	AK077557|Ccdc50|67501|coiled-coil domain containing 50	AK165214|Ccdc50|67501|coiled-coil domain containing 50	AK012190|Ccdc50|67501|coiled-coil domain containing 50	AJ534985|Ccdc50|67501|coiled-coil domain containing 50
mm9_v1_chr16_-_78576898_78576912	2.68773	CUUUGGU	AK009258|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed	NM_025967|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chrX_-_48559008_48559019	2.67097	CUUUGGU	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chrX_+_70232662_70232703	2.6619	CUUUGGU	NM_001109043|Zfp185|22673|zinc finger protein 185	NM_009549|Zfp185|22673|zinc finger protein 185	AK048188|Zfp185|22673|zinc finger protein 185	EF494744|Zfp185|22673|zinc finger protein 185
mm9_v1_chr18_+_61715202_61715299	2.66164	CUUUGGU	BC048081|Csnk1a1|93687|casein kinase 1, alpha 1	BC019740|Csnk1a1|93687|casein kinase 1, alpha 1	NM_146087|Csnk1a1|93687|casein kinase 1, alpha 1	BC025439|Csnk1a1|93687|casein kinase 1, alpha 1
mm9_v1_chr3_-_46251843_46251862	2.65844	CUUUGGU	NM_001101479|Pabpc4l|241989|poly(A) binding protein, cytoplasmic 4-like
mm9_v1_chr16_+_23224804_23224864	2.63958	CUUUGGU	BC092222|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	NM_145933|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr6_-_32538191_32538191	2.63646	CUUUGGU	AB073228|Plxna4|243743|plexin A4	NM_175750|Plxna4|243743|plexin A4
mm9_v1_chr7_+_52825672_52825751	2.63226	CUUUGGU	AK037482|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	AF031467|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC048072|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	NM_009737|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	U68526|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC017688|Bcat2|12036|branched chain aminotransferase 2, mitochondrial
mm9_v1_chr15_+_38908403_38908501	2.61286	CUUUGGU	AK090258|Cthrc1|68588|collagen triple helix repeat containing 1	AK076498|Cthrc1|68588|collagen triple helix repeat containing 1	AK151282|Cthrc1|68588|collagen triple helix repeat containing 1	NM_026778|Cthrc1|68588|collagen triple helix repeat containing 1	AK003674|Cthrc1|68588|collagen triple helix repeat containing 1	BC131907|Cthrc1|68588|collagen triple helix repeat containing 1	BC144745|Cthrc1|68588|collagen triple helix repeat containing 1
mm9_v1_chr11_-_106781995_106782028	2.59774	CUUUGGU	AK012060|Smurf2|66313|SMAD specific E3 ubiquitin protein ligase 2	NM_025481|Smurf2|66313|SMAD specific E3 ubiquitin protein ligase 2
mm9_v1_chr13_+_31717603_31717684	2.59452	CUUUGGU	AK132385|Foxf2|14238|forkhead box F2	NM_010225|Foxf2|14238|forkhead box F2
mm9_v1_chr6_-_100237331_100237351	2.58338	CUUUGGU	BC138324|Rybp|56353|RING1 and YY1 binding protein	BC138325|Rybp|56353|RING1 and YY1 binding protein	BC053016|Rybp|56353|RING1 and YY1 binding protein	NM_019743|Rybp|56353|RING1 and YY1 binding protein
mm9_v1_chr9_+_21351307_21351499	2.58022	CUUUGGU	NM_021531|Carm1|59035|coactivator-associated arginine methyltransferase 1	NM_153141|Carm1|59035|coactivator-associated arginine methyltransferase 1	BC036974|Carm1|59035|coactivator-associated arginine methyltransferase 1	AK158242|Carm1|59035|coactivator-associated arginine methyltransferase 1	BC071267|Carm1|59035|coactivator-associated arginine methyltransferase 1	AF117887|Carm1|59035|coactivator-associated arginine methyltransferase 1	AK158757|Carm1|59035|coactivator-associated arginine methyltransferase 1
mm9_v1_chr4_+_11118500_11118500	2.57508	CUUUGGU	NM_001037134|Ccne2|12448|cyclin E2
mm9_v1_chr11_+_72861327_72861399	2.56902	CUUUGGU	NM_025818|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK163780|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK017496|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK020130|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK165317|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK004766|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK033682|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK153152|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK153241|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	BC118943|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	AK011450|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene	BC098495|1200014J11Rik|66874|RIKEN cDNA 1200014J11 gene
mm9_v1_chr7_+_129210684_129210770	2.56053	CUUUGGU	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr16_-_50432421_50432504	2.55408	CUUUGGU	AK044855|Bbx|70508|bobby sox homolog (Drosophila)	BC019456|Bbx|70508|bobby sox homolog (Drosophila)	BC066821|Bbx|70508|bobby sox homolog (Drosophila)	AF276951|Bbx|70508|bobby sox homolog (Drosophila)	BC064763|Bbx|70508|bobby sox homolog (Drosophila)	BC057869|Bbx|70508|bobby sox homolog (Drosophila)	AK157813|Bbx|70508|bobby sox homolog (Drosophila)	AK049516|Bbx|70508|bobby sox homolog (Drosophila)	AF454943|Bbx|70508|bobby sox homolog (Drosophila)	AK017487|Bbx|70508|bobby sox homolog (Drosophila)	AK029747|Bbx|70508|bobby sox homolog (Drosophila)	AK167724|Bbx|70508|bobby sox homolog (Drosophila)	NM_027444|Bbx|70508|bobby sox homolog (Drosophila)
mm9_v1_chr18_-_44971835_44971845	2.52223	CUUUGGU	AK158266|Mcc|328949|mutated in colorectal cancers	NM_001085373|Mcc|328949|mutated in colorectal cancers
mm9_v1_chr19_-_17912073_17912162	2.52044	CUUUGGU	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr9_+_96159666_96159703	2.52024	CUUUGGU	NM_001184710|Tfdp2|211586|transcription factor Dp 2	NM_001184711|Tfdp2|211586|transcription factor Dp 2	AK158829|Tfdp2|211586|transcription factor Dp 2	BC092230|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr7_-_91032695_91032850	2.476	CUUUGGU	AK162446|Mesdc1|80889|mesoderm development candidate 1	AK084510|Mesdc1|80889|mesoderm development candidate 1	AK089082|Mesdc1|80889|mesoderm development candidate 1	AK036338|Mesdc1|80889|mesoderm development candidate 1	NM_030705|Mesdc1|80889|mesoderm development candidate 1
mm9_v1_chr4_+_43591606_43591606	2.44329	CUUUGGU	NM_172866|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)
mm9_v1_chr15_-_36212893_36212934	2.432	CUUUGGU	NM_013923|Rnf19a|30945|ring finger protein 19A
mm9_v1_chr19_-_10956160_10956239	2.42472	CUUUGGU	BC023901|Tmem109|68539|transmembrane protein 109	AK165990|Tmem109|68539|transmembrane protein 109	BC025033|Tmem109|68539|transmembrane protein 109	AK150779|Tmem109|68539|transmembrane protein 109	AK151850|Tmem109|68539|transmembrane protein 109	AK152419|Tmem109|68539|transmembrane protein 109	BC025815|Tmem109|68539|transmembrane protein 109	BC022997|Tmem109|68539|transmembrane protein 109	NM_134142|Tmem109|68539|transmembrane protein 109	AK049148|Tmem109|68539|transmembrane protein 109
mm9_v1_chr9_-_56265833_56265857	2.40438	CUUUGGU	AK035440|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene	AK048912|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene	NM_172924|C230081A13Rik|244895|RIKEN cDNA C230081A13 gene
mm9_v1_chr1_-_138856866_138857085	2.38089	CUUUGGU	AB221629|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	BC137845|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	M81385|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_030676|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr6_+_49269351_49269403	2.35152	CUUUGGU	AK018135|Ccdc126|57895|coiled-coil domain containing 126	NM_175098|Ccdc126|57895|coiled-coil domain containing 126	BC117837|Ccdc126|57895|coiled-coil domain containing 126
mm9_v1_chr5_-_145118920_145118980	2.34425	CUUUGGU	AK004918|Baiap2l1|66898|BAI1-associated protein 2-like 1	NM_025833|Baiap2l1|66898|BAI1-associated protein 2-like 1
mm9_v1_chr1_+_162836541_162836569	2.31714	CUUUGGU	NM_001024952|Rc3h1|381305|RING CCCH (C3H) domains 1	AK139648|Rc3h1|381305|RING CCCH (C3H) domains 1
mm9_v1_chr11_-_101286641_101286646	2.29399	CUUUGGU	AK007198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	NM_026865|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr3_+_96500993_96501007	2.28968	CUUUGGU	NM_001165949|Pias3|229615|protein inhibitor of activated STAT 3	NM_018812|Pias3|229615|protein inhibitor of activated STAT 3
mm9_v1_chr6_+_120616386_120616438	2.27584	CUUUGGU	AK137536|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)	NM_001128151|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)
mm9_v1_chr12_-_102321911_102321936	2.27295	CUUUGGU	AK053668|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_001160214|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_211355|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr1_+_59969845_59969868	2.26915	CUUUGGU	AK154812|Fam117b|72750|family with sequence similarity 117, member B	NM_001037725|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chrX_+_136335346_136335366	2.26861	CUUUGGU	NM_016675|Cldn2|12738|claudin 2	BC085494|Cldn2|12738|claudin 2
mm9_v1_chr1_+_88423310_88423378	2.2409	CUUUGGU	BC081453|Ptma|19231|prothymosin alpha	BC085171|Ptma|19231|prothymosin alpha	NM_008972|Ptma|19231|prothymosin alpha	X56135|Ptma|19231|prothymosin alpha	BC083135|Ptma|19231|prothymosin alpha
mm9_v1_chr15_+_58247016_58247063	2.24079	CUUUGGU	AK137324|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	NM_145959|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	BC070426|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr1_-_69732373_69732533	2.22575	CUUUGGU	BC138606|Ikzf2|22779|IKAROS family zinc finger 2	BC138608|Ikzf2|22779|IKAROS family zinc finger 2	AK047925|Ikzf2|22779|IKAROS family zinc finger 2	AF044257|Ikzf2|22779|IKAROS family zinc finger 2	NM_011770|Ikzf2|22779|IKAROS family zinc finger 2
mm9_v1_chr13_+_38129095_38129163	2.20097	CUUUGGU	AK152707|Riok1|71340|RIO kinase 1 (yeast)	BC006884|Riok1|71340|RIO kinase 1 (yeast)	AK017312|Riok1|71340|RIO kinase 1 (yeast)	NM_024242|Riok1|71340|RIO kinase 1 (yeast)
mm9_v1_chr13_-_34437042_34437162	2.1951	CUUUGGU	AK147397|Slc22a23|73102|solute carrier family 22, member 23	NM_001033167|Slc22a23|73102|solute carrier family 22, member 23
mm9_v1_chr15_-_76983985_76984241	2.19298	CUUUGGU	AF387322|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659951|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659952|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AY659953|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017388|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ017389|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	BC002124|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AF229055|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	AK044929|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110828|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110829|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110830|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr2_+_92061718_92061757	2.1826	CUUUGGU	NM_001109690|Phf21a|192285|PHD finger protein 21A	AK137085|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr2_+_154262114_154262265	2.17185	CUUUGGU	AK148027|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_009823|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_172860|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK040403|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	DQ213025|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC064679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK049206|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr5_-_76733540_76733585	2.16653	CUUUGGU	AF000998|Clock|12753|circadian locomotor output cycles kaput	NM_007715|Clock|12753|circadian locomotor output cycles kaput
mm9_v1_chr2_+_118727248_118727453	2.12387	CUUUGGU	NM_001045523|Bahd1|228536|bromo adjacent homology domain containing 1	AK152597|Bahd1|228536|bromo adjacent homology domain containing 1
mm9_v1_chr14_+_20570444_20570550	2.1192	CUUUGGU	NM_008695|Nid2|18074|nidogen 2	BC054746|Nid2|18074|nidogen 2	AK045306|Nid2|18074|nidogen 2	AK051664|Nid2|18074|nidogen 2	AK052839|Nid2|18074|nidogen 2	AK083629|Nid2|18074|nidogen 2	AK140832|Nid2|18074|nidogen 2	AK164258|Nid2|18074|nidogen 2	AY074820|Nid2|18074|nidogen 2	BC050224|Nid2|18074|nidogen 2	AB017202|Nid2|18074|nidogen 2	BC057016|Nid2|18074|nidogen 2
mm9_v1_chr15_+_12251250_12251389	2.11206	CUUUGGU	AB271918|Golph3|66629|golgi phosphoprotein 3	BC051035|Golph3|66629|golgi phosphoprotein 3	NM_025673|Golph3|66629|golgi phosphoprotein 3	BC039909|Golph3|66629|golgi phosphoprotein 3	BC031445|Golph3|66629|golgi phosphoprotein 3
mm9_v1_chr7_+_120097475_120097481	2.09951	CUUUGGU	AK031660|Rassf10|78748|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10	NM_175279|Rassf10|78748|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10	AK046433|Rassf10|78748|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10
mm9_v1_chr4_+_115894518_115894602	2.09552	CUUUGGU	BC053102|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	NM_181585|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	AK031936|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm9_v1_chr3_+_31801595_31801757	2.09186	CUUUGGU	AK012400|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2	BC046227|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2	BC058957|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_028231|Kcnmb2|72413|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm9_v1_chr8_+_107749072_107749302	2.08365	CUUUGGU	AK156120|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	NM_145604|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC057919|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK051965|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	AK166937|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066141|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC066826|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene	BC006874|D230025D16Rik|234678|RIKEN cDNA D230025D16 gene
mm9_v1_chr11_+_96227071_96227074	2.07934	CUUUGGU	AK017686|Hoxb1|15407|homeobox B1	NM_008266|Hoxb1|15407|homeobox B1	BC103597|Hoxb1|15407|homeobox B1	BC103598|Hoxb1|15407|homeobox B1	BC103605|Hoxb1|15407|homeobox B1	BC103606|Hoxb1|15407|homeobox B1
mm9_v1_chr8_-_122625167_122625371	2.0695	CUUUGGU	AK170923|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK172462|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK089681|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK090333|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK170639|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK157968|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK041905|Zdhhc7|102193|zinc finger, DHHC domain containing 7	BC075666|Zdhhc7|102193|zinc finger, DHHC domain containing 7	NM_133967|Zdhhc7|102193|zinc finger, DHHC domain containing 7
mm9_v1_chr4_+_123582074_123582311	2.05523	CUUUGGU	BC048478|Mycbp|56309|c-myc binding protein	AK033289|Mycbp|56309|c-myc binding protein	AK077633|Mycbp|56309|c-myc binding protein	AK037661|Mycbp|56309|c-myc binding protein	AK077762|Mycbp|56309|c-myc binding protein	AK077995|Mycbp|56309|c-myc binding protein	AK145773|Mycbp|56309|c-myc binding protein	NM_019660|Mycbp|56309|c-myc binding protein	BC028344|Mycbp|56309|c-myc binding protein	AB015858|Mycbp|56309|c-myc binding protein
mm9_v1_chr4_+_116230293_116230350	2.03404	CUUUGGU	AK037224|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK133761|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK019942|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	BC066034|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	NM_029868|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr1_-_82583400_82583423	2.02159	CUUUGGU	AK164732|Col4a4|12829|collagen, type IV, alpha 4	NM_007735|Col4a4|12829|collagen, type IV, alpha 4
mm9_v1_chr11_+_105946215_105946222	1.99853	CUUUGGU	NM_011947|Map3k3|26406|mitogen-activated protein kinase kinase kinase 3	BC023781|Map3k3|26406|mitogen-activated protein kinase kinase kinase 3
mm9_v1_chr2_+_157250020_157250043	1.97724	CUUUGGU	NM_001025395|Src|20779|Rous sarcoma oncogene	NM_009271|Src|20779|Rous sarcoma oncogene	BC039953|Src|20779|Rous sarcoma oncogene
mm9_v1_chr3_+_88336316_88336316	1.97564	CUUUGGU	NM_001029890|Mex3a|72640|mex3 homolog A (C. elegans)
mm9_v1_chr11_-_33047217_33047399	1.97005	CUUUGGU	AK078245|Fgf18|14172|fibroblast growth factor 18	AB004639|Fgf18|14172|fibroblast growth factor 18	AF211187|Fgf18|14172|fibroblast growth factor 18	AF075291|Fgf18|14172|fibroblast growth factor 18	NM_008005|Fgf18|14172|fibroblast growth factor 18
mm9_v1_chr1_+_193730645_193730708	1.96415	CUUUGGU	AK145100|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	NM_009579|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	BC052166|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1
mm9_v1_chr2_-_70663453_70663686	1.95583	CUUUGGU	BC057369|Tlk1|228012|tousled-like kinase 1	BC051641|Tlk1|228012|tousled-like kinase 1	NM_172664|Tlk1|228012|tousled-like kinase 1
mm9_v1_chr7_+_104230260_104230335	1.93061	CUUUGGU	AF104244|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	NM_001162477|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	NM_010248|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103524|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103525|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103526|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	BC103527|Gab2|14389|growth factor receptor bound protein 2-associated protein 2	AB018414|Gab2|14389|growth factor receptor bound protein 2-associated protein 2
mm9_v1_chr4_+_11118855_11118930	1.92734	CUUUGGU	NM_009830|Ccne2|12448|cyclin E2	AK010929|Ccne2|12448|cyclin E2	AK031116|Ccne2|12448|cyclin E2	AK037791|Ccne2|12448|cyclin E2	AK167428|Ccne2|12448|cyclin E2
mm9_v1_chr4_+_19207954_19207996	1.92507	CUUUGGU	BC100395|Cngb3|30952|cyclic nucleotide gated channel beta 3	AJ243572|Cngb3|30952|cyclic nucleotide gated channel beta 3	NM_013927|Cngb3|30952|cyclic nucleotide gated channel beta 3
mm9_v1_chr9_+_70526702_70526924	1.92291	CUUUGGU	BC066207|Adam10|11487|a disintegrin and metallopeptidase domain 10	NM_007399|Adam10|11487|a disintegrin and metallopeptidase domain 10	BC057346|Adam10|11487|a disintegrin and metallopeptidase domain 10
mm9_v1_chr1_+_36528441_36528549	1.91252	CUUUGGU	NM_033570|Cnnm4|94220|cyclin M4	AK173209|Cnnm4|94220|cyclin M4
mm9_v1_chr17_+_25325344_25325353	1.90818	CUUUGGU	NM_001197024|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chr9_+_72655019_72655080	1.89905	CUUUGGU	AY630257|Prtg|235472|protogenin homolog (Gallus gallus)	DQ360114|Prtg|235472|protogenin homolog (Gallus gallus)	NM_175485|Prtg|235472|protogenin homolog (Gallus gallus)
mm9_v1_chr14_+_31638767_31638861	1.89576	CUUUGGU	AK007740|Tmem110|69179|transmembrane protein 110	NM_028839|Tmem110|69179|transmembrane protein 110	AK009341|Tmem110|69179|transmembrane protein 110	AK076341|Tmem110|69179|transmembrane protein 110	AK149088|Tmem110|69179|transmembrane protein 110	AK155257|Tmem110|69179|transmembrane protein 110
mm9_v1_chr7_-_34918076_34918310	1.88104	CUUUGGU	BC054125|Wtip|101543|WT1-interacting protein	NM_207212|Wtip|101543|WT1-interacting protein
mm9_v1_chr11_-_103273956_103274013	1.87891	CUUUGGU	BC053079|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	NM_183034|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK155357|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1	AK157752|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr5_+_33678157_33678258	1.87791	CUUUGGU	AK145800|Maea|59003|macrophage erythroblast attacher	AK168788|Maea|59003|macrophage erythroblast attacher	AK049424|Maea|59003|macrophage erythroblast attacher	AK088854|Maea|59003|macrophage erythroblast attacher	AK152523|Maea|59003|macrophage erythroblast attacher	AK169149|Maea|59003|macrophage erythroblast attacher	NM_021500|Maea|59003|macrophage erythroblast attacher	AK034859|Maea|59003|macrophage erythroblast attacher	BC058687|Maea|59003|macrophage erythroblast attacher	BC039054|Maea|59003|macrophage erythroblast attacher	AK191436|Maea|59003|macrophage erythroblast attacher	AK218361|Maea|59003|macrophage erythroblast attacher	AK007307|Maea|59003|macrophage erythroblast attacher	AF263247|Maea|59003|macrophage erythroblast attacher
mm9_v1_chr15_+_90054711_90054794	1.8761	CUUUGGU	AK143038|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK166344|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK147821|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	NM_001033441|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK170450|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK153580|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)	AK171179|Alg10b|380959|asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase)
mm9_v1_chr3_-_135354500_135354532	1.86634	CUUUGGU	BC050841|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	NM_008689|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr17_+_28369642_28369770	1.85975	CUUUGGU	NM_011145|Ppard|19015|peroxisome proliferator activator receptor delta	AK154567|Ppard|19015|peroxisome proliferator activator receptor delta	BC070398|Ppard|19015|peroxisome proliferator activator receptor delta	AK089913|Ppard|19015|peroxisome proliferator activator receptor delta
mm9_v1_chr7_+_134628622_134628734	1.85752	CUUUGGU	NM_010183|Fbrs|14123|fibrosin
mm9_v1_chr16_+_33185137_33185252	1.85267	CUUUGGU	BC035278|Osbpl11|106326|oxysterol binding protein-like 11	NM_176840|Osbpl11|106326|oxysterol binding protein-like 11	BC099400|Osbpl11|106326|oxysterol binding protein-like 11
mm9_v1_chr8_+_4238718_4238771	1.83274	CUUUGGU	NM_001042557|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_001164172|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_011944|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022112|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022113|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chrX_-_57657081_57657155	1.82562	CUUUGGU	AK143860|Atp11c|320940|ATPase, class VI, type 11C	BC106087|Atp11c|320940|ATPase, class VI, type 11C	AK079479|Atp11c|320940|ATPase, class VI, type 11C	AK043065|Atp11c|320940|ATPase, class VI, type 11C	AK039243|Atp11c|320940|ATPase, class VI, type 11C	NM_001001798|Atp11c|320940|ATPase, class VI, type 11C	NM_001037863|Atp11c|320940|ATPase, class VI, type 11C
mm9_v1_chr18_-_61336629_61336741	1.82461	CUUUGGU	BC079580|Hmgxb3|106894|HMG box domain containing 3	AK088852|Hmgxb3|106894|HMG box domain containing 3	AK034086|Hmgxb3|106894|HMG box domain containing 3	AK041866|Hmgxb3|106894|HMG box domain containing 3	AK144993|Hmgxb3|106894|HMG box domain containing 3	NM_178277|Hmgxb3|106894|HMG box domain containing 3	AB045322|Hmgxb3|106894|HMG box domain containing 3	NM_134134|Hmgxb3|106894|HMG box domain containing 3
mm9_v1_chr5_+_135625533_135625593	1.82175	CUUUGGU	AK088198|Tbl2|27368|transducin (beta)-like 2	AK132366|Tbl2|27368|transducin (beta)-like 2	BC039273|Tbl2|27368|transducin (beta)-like 2	AK010899|Tbl2|27368|transducin (beta)-like 2	AK165686|Tbl2|27368|transducin (beta)-like 2	BC048185|Tbl2|27368|transducin (beta)-like 2	NM_013763|Tbl2|27368|transducin (beta)-like 2	AF097523|Tbl2|27368|transducin (beta)-like 2
mm9_v1_chr2_-_59963796_59963833	1.81465	CUUUGGU	NM_001001182|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK147737|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr14_-_67691221_67691310	1.76391	CUUUGGU	BC080692|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK161704|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK167530|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK220192|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK161507|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	NM_028032|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK010380|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	BC065100|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK090027|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK164497|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform	AK167189|Ppp2r2a|71978|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform
mm9_v1_chrX_+_136145155_136145229	1.74742	CUUUGGU	AB041548|Rnf128|66889|ring finger protein 128	AK004847|Rnf128|66889|ring finger protein 128	AK018582|Rnf128|66889|ring finger protein 128	NM_023270|Rnf128|66889|ring finger protein 128	AK146266|Rnf128|66889|ring finger protein 128	AY112656|Rnf128|66889|ring finger protein 128	AK167031|Rnf128|66889|ring finger protein 128	BC010477|Rnf128|66889|ring finger protein 128	AK008312|Rnf128|66889|ring finger protein 128
mm9_v1_chr11_+_87861165_87861225	1.74699	CUUUGGU	AK150535|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_001078167|Srsf1|110809|serine/arginine-rich splicing factor 1	NM_173374|Srsf1|110809|serine/arginine-rich splicing factor 1	AK053674|Srsf1|110809|serine/arginine-rich splicing factor 1	AK018176|Srsf1|110809|serine/arginine-rich splicing factor 1	BC058627|Srsf1|110809|serine/arginine-rich splicing factor 1	AK078715|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169203|Srsf1|110809|serine/arginine-rich splicing factor 1	AK169623|Srsf1|110809|serine/arginine-rich splicing factor 1	AK190745|Srsf1|110809|serine/arginine-rich splicing factor 1
mm9_v1_chr7_+_95578782_95579025	1.74669	CUUUGGU	AK054253|Rab38|72433|RAB38, member of RAS oncogene family	NM_028238|Rab38|72433|RAB38, member of RAS oncogene family	AK165682|Rab38|72433|RAB38, member of RAS oncogene family	AK044783|Rab38|72433|RAB38, member of RAS oncogene family	AK009296|Rab38|72433|RAB38, member of RAS oncogene family	AY062237|Rab38|72433|RAB38, member of RAS oncogene family	BC089578|Rab38|72433|RAB38, member of RAS oncogene family	AB232634|Rab38|72433|RAB38, member of RAS oncogene family	AK198599|Rab38|72433|RAB38, member of RAS oncogene family
mm9_v1_chr16_-_75766992_75767062	1.74599	CUUUGGU	BC039701|Hspa13|110920|heat shock protein 70 family, member 13	AK167839|Hspa13|110920|heat shock protein 70 family, member 13	BC094508|Hspa13|110920|heat shock protein 70 family, member 13	BC085181|Hspa13|110920|heat shock protein 70 family, member 13	AK049011|Hspa13|110920|heat shock protein 70 family, member 13	AK021006|Hspa13|110920|heat shock protein 70 family, member 13	AK030553|Hspa13|110920|heat shock protein 70 family, member 13	AK034643|Hspa13|110920|heat shock protein 70 family, member 13	NM_030201|Hspa13|110920|heat shock protein 70 family, member 13
mm9_v1_chrX_+_16196823_16196987	1.73363	CUUUGGU	AK146612|Maoa|17161|monoamine oxidase A	NM_173740|Maoa|17161|monoamine oxidase A	BC029100|Maoa|17161|monoamine oxidase A	AK004337|Maoa|17161|monoamine oxidase A	AK155052|Maoa|17161|monoamine oxidase A	AK164457|Maoa|17161|monoamine oxidase A
mm9_v1_chr12_-_85749901_85749994	1.72904	CUUUGGU	AK085871|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK088455|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK081435|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK037736|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK163688|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK031581|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK036641|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK045828|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK080265|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	NM_001026214|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	NM_007647|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr1_-_138850206_138850206	1.71505	CUUUGGU	DQ133942|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_001159769|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr2_-_62249934_62250287	1.70603	CUUUGGU	X58384|Dpp4|13482|dipeptidylpeptidase 4	AK040409|Dpp4|13482|dipeptidylpeptidase 4	BC022183|Dpp4|13482|dipeptidylpeptidase 4	AK163085|Dpp4|13482|dipeptidylpeptidase 4	NM_001159543|Dpp4|13482|dipeptidylpeptidase 4	NM_010074|Dpp4|13482|dipeptidylpeptidase 4
mm9_v1_chr5_-_67819037_67819037	1.68917	CUUUGGU	NM_001164806|Bend4|666938|BEN domain containing 4
mm9_v1_chr3_-_100293092_100293154	1.67712	CUUUGGU	BC037072|Fam46c|74645|family with sequence similarity 46, member C	BC120717|Fam46c|74645|family with sequence similarity 46, member C	BC120719|Fam46c|74645|family with sequence similarity 46, member C	BC046309|Fam46c|74645|family with sequence similarity 46, member C	NM_001142952|Fam46c|74645|family with sequence similarity 46, member C
mm9_v1_chr4_-_150432002_150432098	1.66276	CUUUGGU	U60961|Vamp3|22319|vesicle-associated membrane protein 3	AK165947|Vamp3|22319|vesicle-associated membrane protein 3	BC060045|Vamp3|22319|vesicle-associated membrane protein 3	AK168413|Vamp3|22319|vesicle-associated membrane protein 3	AK169087|Vamp3|22319|vesicle-associated membrane protein 3	AK051691|Vamp3|22319|vesicle-associated membrane protein 3	AK169056|Vamp3|22319|vesicle-associated membrane protein 3	AK051272|Vamp3|22319|vesicle-associated membrane protein 3	NM_009498|Vamp3|22319|vesicle-associated membrane protein 3
mm9_v1_chr5_+_137960107_137960139	1.63141	CUUUGGU	AY176042|Gigyf1|57330|GRB10 interacting GYF protein 1	NM_031408|Gigyf1|57330|GRB10 interacting GYF protein 1	BC052875|Gigyf1|57330|GRB10 interacting GYF protein 1
mm9_v1_chr13_-_117099629_117099895	1.62043	CUUUGGU	AB104633|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AJ132765|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	BC132609|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK044406|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK090263|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	AK143052|Isl1|16392|ISL1 transcription factor, LIM/homeodomain	NM_021459|Isl1|16392|ISL1 transcription factor, LIM/homeodomain
mm9_v1_chr15_-_103045710_103045798	1.61998	CUUUGGU	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr8_-_36028698_36028768	1.61316	CUUUGGU	BC057370|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	AK080913|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	NM_175091|Tnks|21951|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm9_v1_chr12_+_25257147_25257167	1.61269	CUUUGGU	NM_001161406|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK167035|Grhl1|195733|grainyhead-like 1 (Drosophila)	BC037233|Grhl1|195733|grainyhead-like 1 (Drosophila)	AK076307|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr17_-_30024821_30024837	1.58218	CUUUGGU	NM_001081160|Mdga1|74762|MAM domain containing glycosylphosphatidylinositol anchor 1
mm9_v1_chr1_+_174306656_174306726	1.58016	CUUUGGU	NM_026234|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK082746|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	BC005650|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK088117|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	BC083115|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK040397|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK044641|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK080242|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK018560|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M	AK148197|Pigm|67556|phosphatidylinositol glycan anchor biosynthesis, class M
mm9_v1_chr2_+_30247921_30247956	1.55918	CUUUGGU	AB030189|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK002544|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK044141|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK088065|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	NM_020329|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK053923|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	BC026544|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1
mm9_v1_chr3_+_89234758_89234758	1.55917	CUUUGGU	AK132759|Pygo2|68911|pygopus 2	NM_026869|Pygo2|68911|pygopus 2
mm9_v1_chr12_-_55757465_55757605	1.54251	CUUUGGU	AK182833|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	BC022674|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK003275|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK003171|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK008904|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK137543|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK018380|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	NM_134054|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene
mm9_v1_chrX_+_157205944_157206093	1.52737	CUUUGGU	BC046422|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	NM_011302|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF084561|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF073780|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AJ011381|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)
mm9_v1_chr10_-_116813919_116814033	1.52114	CUUUGGU	AK048615|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK046856|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK168764|Cpsf6|432508|cleavage and polyadenylation specific factor 6	BC068133|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK049749|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK077684|Cpsf6|432508|cleavage and polyadenylation specific factor 6	NM_001013391|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr13_+_95128874_95128994	1.52092	CUUUGGU	AK171595|Ap3b1|11774|adaptor-related protein complex 3, beta 1 subunit	NM_009680|Ap3b1|11774|adaptor-related protein complex 3, beta 1 subunit	AK143559|Ap3b1|11774|adaptor-related protein complex 3, beta 1 subunit	AK163957|Ap3b1|11774|adaptor-related protein complex 3, beta 1 subunit	AF103809|Ap3b1|11774|adaptor-related protein complex 3, beta 1 subunit
mm9_v1_chr14_-_102008407_102008407	1.51519	CUUUGGU	AK039337|Tbc1d4|210789|TBC1 domain family, member 4	NM_001081278|Tbc1d4|210789|TBC1 domain family, member 4
mm9_v1_chr3_-_103594950_103595238	1.49903	CUUUGGU	BC145697|Hipk1|15257|homeodomain interacting protein kinase 1	BC145699|Hipk1|15257|homeodomain interacting protein kinase 1	AF170303|Hipk1|15257|homeodomain interacting protein kinase 1	AF170304|Hipk1|15257|homeodomain interacting protein kinase 1	AF077658|Hipk1|15257|homeodomain interacting protein kinase 1	AK134408|Hipk1|15257|homeodomain interacting protein kinase 1	NM_010432|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chrX_+_65931715_65931923	1.49883	CUUUGGU	AK053829|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	BC079671|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	NM_008031|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK140343|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK046605|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK053701|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080898|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	AK080948|Fmr1|14265|fragile X mental retardation syndrome 1 homolog	L23971|Fmr1|14265|fragile X mental retardation syndrome 1 homolog
mm9_v1_chr2_+_121274946_121274963	1.49881	CUUUGGU	NM_011354|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr6_-_38204008_38204008	1.49825	CUUUGGU	NM_194061|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr17_-_46693110_46693149	1.49146	CUUUGGU	NM_020493|Srf|20807|serum response factor	BC051950|Srf|20807|serum response factor
mm9_v1_chr8_+_74685098_74685285	1.46746	CUUUGGU	NM_023126|Rab8a|17274|RAB8A, member RAS oncogene family	AK076048|Rab8a|17274|RAB8A, member RAS oncogene family	AK147178|Rab8a|17274|RAB8A, member RAS oncogene family	AK079306|Rab8a|17274|RAB8A, member RAS oncogene family	S53270|Rab8a|17274|RAB8A, member RAS oncogene family	AK009259|Rab8a|17274|RAB8A, member RAS oncogene family	AK010862|Rab8a|17274|RAB8A, member RAS oncogene family	AK080740|Rab8a|17274|RAB8A, member RAS oncogene family	AK165690|Rab8a|17274|RAB8A, member RAS oncogene family	AB232600|Rab8a|17274|RAB8A, member RAS oncogene family	BC019990|Rab8a|17274|RAB8A, member RAS oncogene family	AY974570|Rab8a|17274|RAB8A, member RAS oncogene family
mm9_v1_chr7_+_66484094_66484221	1.46284	CUUUGGU	AK029133|Ube3a|22215|ubiquitin protein ligase E3A	NM_173010|Ube3a|22215|ubiquitin protein ligase E3A	NM_001033962|Ube3a|22215|ubiquitin protein ligase E3A	NM_011668|Ube3a|22215|ubiquitin protein ligase E3A	BC131658|Ube3a|22215|ubiquitin protein ligase E3A	BC131659|Ube3a|22215|ubiquitin protein ligase E3A	AK083795|Ube3a|22215|ubiquitin protein ligase E3A	AK220549|Ube3a|22215|ubiquitin protein ligase E3A
mm9_v1_chr13_-_64349830_64349845	1.4435	CUUUGGU	AK041155|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001122989|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr10_-_127984766_127984851	1.43175	CUUUGGU	AK050662|Zc3h10|103284|zinc finger CCCH type containing 10	BC022677|Zc3h10|103284|zinc finger CCCH type containing 10	NM_134003|Zc3h10|103284|zinc finger CCCH type containing 10	AK031312|Zc3h10|103284|zinc finger CCCH type containing 10
mm9_v1_chr1_+_169619688_169619905	1.41944	CUUUGGU	AK044944|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	NM_033652|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	BC109167|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	BC109168|Lmx1a|110648|LIM homeobox transcription factor 1 alpha	AF226662|Lmx1a|110648|LIM homeobox transcription factor 1 alpha
mm9_v1_chr4_+_13670425_13670448	1.403	CUUUGGU	AK142006|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001111026|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr11_-_95926589_95926740	1.39353	CUUUGGU	AK077793|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK149770|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	NM_172300|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr2_-_119980243_119980354	1.36674	CUUUGGU	BC012272|Ehd4|98878|EH-domain containing 4	AK149760|Ehd4|98878|EH-domain containing 4	AK163835|Ehd4|98878|EH-domain containing 4	AK147186|Ehd4|98878|EH-domain containing 4	AK159235|Ehd4|98878|EH-domain containing 4	AK159597|Ehd4|98878|EH-domain containing 4	NM_133838|Ehd4|98878|EH-domain containing 4	AK166101|Ehd4|98878|EH-domain containing 4	AK169343|Ehd4|98878|EH-domain containing 4
mm9_v1_chr9_-_70351520_70351611	1.36078	CUUUGGU	AK171932|Rnf111|93836|ring finger 111	AF330197|Rnf111|93836|ring finger 111	NM_033604|Rnf111|93836|ring finger 111
mm9_v1_chr10_-_42303392_42303437	1.35278	CUUUGGU	NM_152229|Nr2e1|21907|nuclear receptor subfamily 2, group E, member 1	AK132201|Nr2e1|21907|nuclear receptor subfamily 2, group E, member 1	S77482|Nr2e1|21907|nuclear receptor subfamily 2, group E, member 1	BC057104|Nr2e1|21907|nuclear receptor subfamily 2, group E, member 1
mm9_v1_chr11_+_74644411_74644428	1.35196	CUUUGGU	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr5_+_93112460_93112460	1.34552	CUUUGGU	AF199421|Shroom3|27428|shroom family member 3	NM_015756|Shroom3|27428|shroom family member 3
mm9_v1_chr11_-_76577056_76577075	1.32182	CUUUGGU	BC008542|Gosr1|53334|golgi SNAP receptor complex member 1	NM_016810|Gosr1|53334|golgi SNAP receptor complex member 1	AK134515|Gosr1|53334|golgi SNAP receptor complex member 1	AK133836|Gosr1|53334|golgi SNAP receptor complex member 1	AK161386|Gosr1|53334|golgi SNAP receptor complex member 1	AF079901|Gosr1|53334|golgi SNAP receptor complex member 1	BC051661|Gosr1|53334|golgi SNAP receptor complex member 1
mm9_v1_chr2_-_104334610_104334646	1.30171	CUUUGGU	NM_001145824|Hipk3|15259|homeodomain interacting protein kinase 3	NM_010434|Hipk3|15259|homeodomain interacting protein kinase 3
mm9_v1_chr9_+_56924152_56924295	1.30008	CUUUGGU	NM_001110350|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	NM_011378|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	U22394|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	AK220292|Sin3a|20466|transcriptional regulator, SIN3A (yeast)	BC052716|Sin3a|20466|transcriptional regulator, SIN3A (yeast)
mm9_v1_chr16_-_44016471_44016548	1.28922	CUUUGGU	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr11_+_115761444_115761621	1.28866	CUUUGGU	NM_183259|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	AK020450|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	AK004370|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	BC065414|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene
mm9_v1_chr10_+_99478457_99478639	1.28822	CUUUGGU	AK018777|Kitl|17311|kit ligand	NM_013598|Kitl|17311|kit ligand	U44725|Kitl|17311|kit ligand	AK134301|Kitl|17311|kit ligand	AK041961|Kitl|17311|kit ligand	AK165233|Kitl|17311|kit ligand	BC011322|Kitl|17311|kit ligand	M57647|Kitl|17311|kit ligand	S40364|Kitl|17311|kit ligand	S40534|Kitl|17311|kit ligand	S40536|Kitl|17311|kit ligand	M64262|Kitl|17311|kit ligand	X95379|Kitl|17311|kit ligand	X95380|Kitl|17311|kit ligand	X95381|Kitl|17311|kit ligand	X99322|Kitl|17311|kit ligand	Y10287|Kitl|17311|kit ligand	M59915|Kitl|17311|kit ligand
mm9_v1_chr15_-_79363346_79363346	1.28613	CUUUGGU	NM_152806|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr10_-_114821398_114821490	1.27628	CUUUGGU	BC027502|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK051198|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK009162|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK018577|Thap2|66816|THAP domain containing, apoptosis associated protein 2	AK081303|Thap2|66816|THAP domain containing, apoptosis associated protein 2	NM_025780|Thap2|66816|THAP domain containing, apoptosis associated protein 2
mm9_v1_chrX_+_12858142_12858215	1.27188	CUUUGGU	AK140990|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	NM_010028|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	Z38117|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	AK163250|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	BC150862|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	BC172016|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	L25126|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr19_-_6915038_6915131	1.25374	CUUUGGU	AK195314|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AF074714|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	NM_019924|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK089467|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK154674|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	BC012964|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4
mm9_v1_chr16_-_44028057_44028057	1.25044	CUUUGGU	AK029543|Gramd1c|207798|GRAM domain containing 1C	NM_001172107|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr4_-_124805061_124805211	1.24888	CUUUGGU	AK161733|Zc3h12a|230738|zinc finger CCCH type containing 12A	AK152196|Zc3h12a|230738|zinc finger CCCH type containing 12A	AK161150|Zc3h12a|230738|zinc finger CCCH type containing 12A	AK172357|Zc3h12a|230738|zinc finger CCCH type containing 12A	BC036563|Zc3h12a|230738|zinc finger CCCH type containing 12A	AK154363|Zc3h12a|230738|zinc finger CCCH type containing 12A	AK163109|Zc3h12a|230738|zinc finger CCCH type containing 12A	AK142501|Zc3h12a|230738|zinc finger CCCH type containing 12A	AK149698|Zc3h12a|230738|zinc finger CCCH type containing 12A	NM_153159|Zc3h12a|230738|zinc finger CCCH type containing 12A
mm9_v1_chr1_+_82836029_82836087	1.23454	CUUUGGU	AK048326|Agfg1|15463|ArfGAP with FG repeats 1	NM_010472|Agfg1|15463|ArfGAP with FG repeats 1	AK049400|Agfg1|15463|ArfGAP with FG repeats 1	BC031154|Agfg1|15463|ArfGAP with FG repeats 1
mm9_v1_chr2_+_166631011_166631132	1.22951	CUUUGGU	AK087574|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	NM_001085495|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	AK087920|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	BC158012|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	AK153722|Arfgef2|99371|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm9_v1_chrX_-_97790207_97790207	1.22425	CUUUGGU	AK076364|P2ry4|57385|pyrimidinergic receptor P2Y, G-protein coupled, 4	NM_020621|P2ry4|57385|pyrimidinergic receptor P2Y, G-protein coupled, 4
mm9_v1_chr11_+_101037415_101037470	1.22094	CUUUGGU	AF039833|Cntnap1|53321|contactin associated protein-like 1	NM_016782|Cntnap1|53321|contactin associated protein-like 1
mm9_v1_chrX_+_82819294_82819360	1.16685	CUUUGGU	AK220185|Tab3|66724|TGF-beta activated kinase 1/MAP3K7 binding protein 3	NM_025729|Tab3|66724|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm9_v1_chr17_+_34324496_34324509	1.16158	CUUUGGU	AK153890|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	AK166046|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	AK167485|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	NM_001161730|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	NM_013683|Tap1|21354|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr15_+_102751533_102751620	1.15716	CUUUGGU	AY349616|Hoxc13|15422|homeobox C13	AF193796|Hoxc13|15422|homeobox C13	NM_010464|Hoxc13|15422|homeobox C13
mm9_v1_chr14_+_99445595_99445694	1.15528	CUUUGGU	AK034930|6720463M24Rik|77744|RIKEN cDNA 6720463M24 gene	NM_175265|6720463M24Rik|77744|RIKEN cDNA 6720463M24 gene	AK141389|6720463M24Rik|77744|RIKEN cDNA 6720463M24 gene	AK167430|6720463M24Rik|77744|RIKEN cDNA 6720463M24 gene	BC052183|6720463M24Rik|77744|RIKEN cDNA 6720463M24 gene
mm9_v1_chr7_-_134757946_134757946	1.15434	CUUUGGU	BC067053|Zfp629|320683|zinc finger protein 629	NM_177226|Zfp629|320683|zinc finger protein 629
mm9_v1_chr11_+_69579376_69579461	1.1364	CUUUGGU	AK163593|Zbtb4|75580|zinc finger and BTB domain containing 4	NM_029348|Zbtb4|75580|zinc finger and BTB domain containing 4	AK147212|Zbtb4|75580|zinc finger and BTB domain containing 4
mm9_v1_chr16_-_5204078_5204121	1.13527	CUUUGGU	AK155450|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK159629|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK169539|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK170219|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK162633|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	BC039790|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK168830|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK138035|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK032158|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	AK087468|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	NM_013796|Nagpa|27426|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
mm9_v1_chr4_+_80556574_80556717	1.1259	CUUUGGU	NM_026821|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC030404|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed	BC021501|D4Bwg0951e|52829|DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed
mm9_v1_chr9_+_45820886_45820906	1.11217	CUUUGGU	NM_027498|Sik3|70661|SIK family kinase 3
mm9_v1_chr11_-_97213379_97213390	1.08686	CUUUGGU	AK038894|Gpr179|217143|G protein-coupled receptor 179	NM_001081220|Gpr179|217143|G protein-coupled receptor 179	AK030625|Gpr179|217143|G protein-coupled receptor 179
mm9_v1_chr1_-_156573049_156573160	1.07849	CUUUGGU	NM_009782|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit	BC150750|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm9_v1_chr5_+_144383313_144383461	1.07251	CUUUGGU	NM_011182|Cyth3|19159|cytohesin 3	AK142407|Cyth3|19159|cytohesin 3	AK220565|Cyth3|19159|cytohesin 3	AK159229|Cyth3|19159|cytohesin 3	BC035296|Cyth3|19159|cytohesin 3	AK036191|Cyth3|19159|cytohesin 3	AK168566|Cyth3|19159|cytohesin 3	AF084221|Cyth3|19159|cytohesin 3	AB013470|Cyth3|19159|cytohesin 3
mm9_v1_chr5_-_73647856_73647874	1.07188	CUUUGGU	AK164590|Fryl|72313|furry homolog-like (Drosophila)	NM_028194|Fryl|72313|furry homolog-like (Drosophila)
mm9_v1_chr19_-_44144244_44144286	1.06753	CUUUGGU	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr14_-_103498719_103498784	1.06299	CUUUGGU	AK142007|Fbxl3|50789|F-box and leucine-rich repeat protein 3	NM_015822|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080863|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080802|Fbxl3|50789|F-box and leucine-rich repeat protein 3
mm9_v1_chr11_+_35582969_35582996	1.05965	CUUUGGU	AK039865|Pank3|211347|pantothenate kinase 3	NM_145962|Pank3|211347|pantothenate kinase 3
mm9_v1_chr10_+_80599005_80599015	1.0404	CUUUGGU	BC024815|Zbtb7a|16969|zinc finger and BTB domain containing 7a	NM_010731|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr7_-_107128967_107128967	1.0392	CUUUGGU	NM_175388|Rnf169|108937|ring finger protein 169
mm9_v1_chr2_+_75670230_75670233	1.03446	CUUUGGU	AK031049|Agps|228061|alkylglycerone phosphate synthase	NM_172666|Agps|228061|alkylglycerone phosphate synthase
mm9_v1_chr2_-_13715101_13715210	1.03425	CUUUGGU	BC115912|St8sia6|241230|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	BC118063|St8sia6|241230|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	AB059554|St8sia6|241230|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	NM_145838|St8sia6|241230|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	AK172400|St8sia6|241230|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
mm9_v1_chr10_-_39862004_39862094	1.03406	CUUUGGU	AK151636|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK036743|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK144135|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK151290|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK151704|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK157355|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK165240|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK165579|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	NM_001114332|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	NM_028247|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK050229|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10	AK011813|Slc16a10|72472|solute carrier family 16 (monocarboxylic acid transporters), member 10
mm9_v1_chr14_-_70607443_70607553	1.00806	CUUUGGU	AF064806|Sorbs3|20410|sorbin and SH3 domain containing 3	NM_011366|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr7_-_138553991_138554026	0.989838	CUUUGGU	BC048183|Ikzf5|67143|IKAROS family zinc finger 5	BC058537|Ikzf5|67143|IKAROS family zinc finger 5	NM_175115|Ikzf5|67143|IKAROS family zinc finger 5	AK153883|Ikzf5|67143|IKAROS family zinc finger 5	AK033716|Ikzf5|67143|IKAROS family zinc finger 5	BC089455|Ikzf5|67143|IKAROS family zinc finger 5	AK169384|Ikzf5|67143|IKAROS family zinc finger 5
mm9_v1_chr10_+_51953390_51953445	0.973291	CUUUGGU	AK016485|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1	NM_025705|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1	AK157211|Dcbld1|66686|discoidin, CUB and LCCL domain containing 1
mm9_v1_chr7_+_71432538_71432641	0.966369	CUUUGGU	AK088715|Mtmr10|233315|myotubularin related protein 10	NM_172742|Mtmr10|233315|myotubularin related protein 10	BC041672|Mtmr10|233315|myotubularin related protein 10
mm9_v1_chr7_+_130267398_130267398	0.961503	CUUUGGU	NM_144925|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr6_-_97010364_97010406	0.956282	CUUUGGU	BC089490|Fam19a4|320701|family with sequence similarity 19, member A4	AK081531|Fam19a4|320701|family with sequence similarity 19, member A4	AK084114|Fam19a4|320701|family with sequence similarity 19, member A4	NM_177233|Fam19a4|320701|family with sequence similarity 19, member A4	AK149355|Fam19a4|320701|family with sequence similarity 19, member A4
mm9_v1_chr8_+_73063553_73063604	0.947128	CUUUGGU	NM_007924|Ell|13716|elongation factor RNA polymerase II	AK159027|Ell|13716|elongation factor RNA polymerase II	U80227|Ell|13716|elongation factor RNA polymerase II	BC014816|Ell|13716|elongation factor RNA polymerase II	BC024894|Ell|13716|elongation factor RNA polymerase II
mm9_v1_chr7_-_72516109_72516162	0.945308	CUUUGGU	D14340|Tjp1|21872|tight junction protein 1	NM_001163574|Tjp1|21872|tight junction protein 1	NM_009386|Tjp1|21872|tight junction protein 1
mm9_v1_chr12_+_82960953_82961016	0.943717	CUUUGGU	NM_018814|Pcnx|54604|pecanex homolog (Drosophila)
mm9_v1_chr5_+_144412109_144412109	0.916456	CUUUGGU	AK016645|Cyth3|19159|cytohesin 3	NM_001163548|Cyth3|19159|cytohesin 3
mm9_v1_chr8_+_13159112_13159277	0.90073	CUUUGGU	NM_010684|Lamp1|16783|lysosomal-associated membrane protein 1	BC049097|Lamp1|16783|lysosomal-associated membrane protein 1	AY069968|Lamp1|16783|lysosomal-associated membrane protein 1	AK172007|Lamp1|16783|lysosomal-associated membrane protein 1	AK159096|Lamp1|16783|lysosomal-associated membrane protein 1	AK004637|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr2_-_180655611_180655736	0.899363	CUUUGGU	BC061479|Ythdf1|228994|YTH domain family 1	AK172582|Ythdf1|228994|YTH domain family 1	AK075846|Ythdf1|228994|YTH domain family 1	BC065050|Ythdf1|228994|YTH domain family 1	NM_173761|Ythdf1|228994|YTH domain family 1	AK033241|Ythdf1|228994|YTH domain family 1	AK046768|Ythdf1|228994|YTH domain family 1
mm9_v1_chr10_-_18731766_18731781	0.850902	CUUUGGU	AK171326|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK172529|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	NM_001166402|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3
mm9_v1_chr16_-_37539763_37539874	0.849908	CUUUGGU	AK080478|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK154283|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK031528|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK011543|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	NM_028812|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK084978|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	BC056966|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)
mm9_v1_chr1_-_13364092_13364163	0.849242	CUUUGGU	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chr12_+_25265583_25265583	0.832744	CUUUGGU	AF411211|Grhl1|195733|grainyhead-like 1 (Drosophila)	NM_145890|Grhl1|195733|grainyhead-like 1 (Drosophila)
mm9_v1_chr5_+_102910409_102910555	0.81921	CUUUGGU	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr15_+_79521293_79521438	0.816324	CUUUGGU	AK150068|Gtpbp1|14904|GTP binding protein 1	AK150185|Gtpbp1|14904|GTP binding protein 1	AK158342|Gtpbp1|14904|GTP binding protein 1	AK004612|Gtpbp1|14904|GTP binding protein 1	AK147717|Gtpbp1|14904|GTP binding protein 1	AK170091|Gtpbp1|14904|GTP binding protein 1	BC046228|Gtpbp1|14904|GTP binding protein 1	NM_013818|Gtpbp1|14904|GTP binding protein 1	U87965|Gtpbp1|14904|GTP binding protein 1
mm9_v1_chr7_+_133572272_133572289	0.812077	CUUUGGU	BC015287|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2	NM_030566|Rabep2|70314|rabaptin, RAB GTPase binding effector protein 2
mm9_v1_chr5_-_124875921_124875965	0.805743	CUUUGGU	NM_001081203|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK077133|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)	AK165852|Sbno1|243272|sno, strawberry notch homolog 1 (Drosophila)
mm9_v1_chr19_-_32462926_32462979	0.803773	CUUUGGU	AK151170|Sgms1|208449|sphingomyelin synthase 1	AK153406|Sgms1|208449|sphingomyelin synthase 1	AK146782|Sgms1|208449|sphingomyelin synthase 1	AY509044|Sgms1|208449|sphingomyelin synthase 1	NM_144792|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr4_-_43059017_43059097	0.803014	CUUUGGU	AK161380|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	AK045811|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	NM_172691|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene	BC054736|B230312A22Rik|230088|RIKEN cDNA B230312A22 gene
mm9_v1_chr15_-_102455844_102455918	0.797893	CUUUGGU	BC026483|Atf7|223922|activating transcription factor 7	NM_146065|Atf7|223922|activating transcription factor 7	AK155444|Atf7|223922|activating transcription factor 7	AK157628|Atf7|223922|activating transcription factor 7	AK164412|Atf7|223922|activating transcription factor 7
mm9_v1_chr16_+_90386629_90386722	0.795862	CUUUGGU	AF167987|Hunk|26559|hormonally upregulated Neu-associated kinase	AF055919|Hunk|26559|hormonally upregulated Neu-associated kinase	NM_015755|Hunk|26559|hormonally upregulated Neu-associated kinase	AK144639|Hunk|26559|hormonally upregulated Neu-associated kinase
mm9_v1_chr1_+_165860156_165860230	0.785653	CUUUGGU	AK004809|Scyl3|240880|SCY1-like 3 (S. cerevisiae)	BC043085|Scyl3|240880|SCY1-like 3 (S. cerevisiae)	NM_028776|Scyl3|240880|SCY1-like 3 (S. cerevisiae)	BC066800|Scyl3|240880|SCY1-like 3 (S. cerevisiae)
mm9_v1_chr16_+_5050149_5050235	0.780842	CUUUGGU	AK019173|Ubn1|170644|ubinuclein 1	AK147571|Ubn1|170644|ubinuclein 1	NM_026666|Ubn1|170644|ubinuclein 1	AK020146|Ubn1|170644|ubinuclein 1
mm9_v1_chr4_-_134108044_134108129	0.77907	CUUUGGU	NM_029100|Sepn1|74777|selenoprotein N, 1
mm9_v1_chr14_+_31528800_31528932	0.776576	CUUUGGU	AK154826|Sfmbt1|54650|Scm-like with four mbt domains 1	NM_001166532|Sfmbt1|54650|Scm-like with four mbt domains 1	BC036972|Sfmbt1|54650|Scm-like with four mbt domains 1	AK142330|Sfmbt1|54650|Scm-like with four mbt domains 1	BC018217|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr12_-_88541151_88541189	0.74474	CUUUGGU	AK147378|Tmed8|382620|transmembrane emp24 domain containing 8	NM_001033475|Tmed8|382620|transmembrane emp24 domain containing 8
mm9_v1_chr5_-_9161670_9161791	0.741005	CUUUGGU	AK046201|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK078015|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC060109|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK029147|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK031887|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC045141|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	BC010272|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	U70017|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK040107|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK145803|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK033208|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK039563|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK030508|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	AK160595|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	NM_001110327|Dmtf1|23857|cyclin D binding myb-like transcription factor 1	NM_011806|Dmtf1|23857|cyclin D binding myb-like transcription factor 1
mm9_v1_chrX_+_147955201_147955234	0.739007	CUUUGGU	AK040969|Phf8|320595|PHD finger protein 8	NM_001113354|Phf8|320595|PHD finger protein 8	NM_177201|Phf8|320595|PHD finger protein 8
mm9_v1_chr13_+_109004589_109004634	0.727995	CUUUGGU	AK049118|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	BC005602|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	NM_029001|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK050441|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK137668|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK018616|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)	AK037162|Elovl7|74559|ELOVL family member 7, elongation of long chain fatty acids (yeast)
mm9_v1_chr9_-_119213954_119213965	0.72391	CUUUGGU	AK031790|Oxsr1|108737|oxidative-stress responsive 1	AK075837|Oxsr1|108737|oxidative-stress responsive 1	NM_133985|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr14_-_78488780_78488813	0.719004	CUUUGGU	BC120488|AU021034|219170|expressed sequence AU021034	BC120490|AU021034|219170|expressed sequence AU021034	AK047611|AU021034|219170|expressed sequence AU021034	AK034132|AU021034|219170|expressed sequence AU021034	NM_177629|AU021034|219170|expressed sequence AU021034
mm9_v1_chr5_+_98683202_98683430	0.701501	CUUUGGU	AK028894|Fgf5|14176|fibroblast growth factor 5	NM_010203|Fgf5|14176|fibroblast growth factor 5	BC071227|Fgf5|14176|fibroblast growth factor 5	AK028694|Fgf5|14176|fibroblast growth factor 5	AB016516|Fgf5|14176|fibroblast growth factor 5	M30643|Fgf5|14176|fibroblast growth factor 5
mm9_v1_chr17_+_6106829_6106853	0.687887	CUUUGGU	NM_001103181|Tulp4|68842|tubby like protein 4
mm9_v1_chr17_+_66132694_66132705	0.681209	CUUUGGU	NM_001114131|Ppp4r1|70351|protein phosphatase 4, regulatory subunit 1	NM_146081|Ppp4r1|70351|protein phosphatase 4, regulatory subunit 1
mm9_v1_chr10_-_78180902_78181043	0.675833	CUUUGGU	AJ007750|Casp14|12365|caspase 14	BC101959|Casp14|12365|caspase 14	BC101960|Casp14|12365|caspase 14	BC103555|Casp14|12365|caspase 14	BC103556|Casp14|12365|caspase 14	AK081645|Casp14|12365|caspase 14	NM_009809|Casp14|12365|caspase 14
mm9_v1_chr8_-_82581887_82581932	0.675696	CUUUGGU	AF116865|Hhip|15245|Hedgehog-interacting protein	BC053012|Hhip|15245|Hedgehog-interacting protein	AK031539|Hhip|15245|Hedgehog-interacting protein	NM_020259|Hhip|15245|Hedgehog-interacting protein
mm9_v1_chr11_-_33413715_33413767	0.675489	CUUUGGU	NM_023146|Ranbp17|66011|RAN binding protein 17
mm9_v1_chr11_+_110927475_110927548	0.675377	CUUUGGU	AK044915|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	NM_008425|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	X73052|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2
mm9_v1_chr1_+_153602492_153602592	0.657614	CUUUGGU	AB188342|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	NM_001039644|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	AK141326|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	AK143252|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC138658|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC138659|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC145357|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC145358|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3
mm9_v1_chr7_+_28964486_28964515	0.6552	CUUUGGU	BC019545|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_001037957|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	NM_010092|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	Y18280|Dyrk1b|13549|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm9_v1_chr8_+_82163574_82163602	0.653955	CUUUGGU	NM_001081164|Otud4|73945|OTU domain containing 4	BC138373|Otud4|73945|OTU domain containing 4	BC145259|Otud4|73945|OTU domain containing 4
mm9_v1_chr8_+_108384479_108384590	0.644429	CUUUGGU	BC083165|Nutf2|68051|nuclear transport factor 2	AK152212|Nutf2|68051|nuclear transport factor 2	BC003955|Nutf2|68051|nuclear transport factor 2	NM_026532|Nutf2|68051|nuclear transport factor 2	AK020512|Nutf2|68051|nuclear transport factor 2	AK028410|Nutf2|68051|nuclear transport factor 2	AK002461|Nutf2|68051|nuclear transport factor 2	AK012500|Nutf2|68051|nuclear transport factor 2	AK051049|Nutf2|68051|nuclear transport factor 2	AK168026|Nutf2|68051|nuclear transport factor 2	BC086773|Nutf2|68051|nuclear transport factor 2
mm9_v1_chr17_-_28759356_28759496	0.641344	CUUUGGU	AB012290|Srpk1|20815|serine/arginine-rich protein specific kinase 1	BC005707|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK161346|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK161388|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AJ224115|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK017187|Srpk1|20815|serine/arginine-rich protein specific kinase 1	BC050761|Srpk1|20815|serine/arginine-rich protein specific kinase 1	NM_016795|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK151152|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK141271|Srpk1|20815|serine/arginine-rich protein specific kinase 1
mm9_v1_chr10_-_61885155_61885204	0.629644	CUUUGGU	AK044665|Hkdc1|216019|hexokinase domain containing 1	AK145980|Hkdc1|216019|hexokinase domain containing 1	BC016235|Hkdc1|216019|hexokinase domain containing 1	NM_145419|Hkdc1|216019|hexokinase domain containing 1
mm9_v1_chr19_+_23761879_23761891	0.624902	CUUUGGU	NM_028208|Ptar1|72351|protein prenyltransferase alpha subunit repeat containing 1
mm9_v1_chr11_-_69182891_69182931	0.61483	CUUUGGU	AK045449|Chd3|216848|chromodomain helicase DNA binding protein 3	NM_146019|Chd3|216848|chromodomain helicase DNA binding protein 3
mm9_v1_chr9_-_97011440_97011575	0.614356	CUUUGGU	BC008171|Slc25a36|192287|solute carrier family 25, member 36	AK078779|Slc25a36|192287|solute carrier family 25, member 36	NM_138756|Slc25a36|192287|solute carrier family 25, member 36	AK042075|Slc25a36|192287|solute carrier family 25, member 36	AK053646|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chrX_-_131343759_131343759	0.601101	CUUUGGU	AK172960|Armcx2|67416|armadillo repeat containing, X-linked 2	NM_001166397|Armcx2|67416|armadillo repeat containing, X-linked 2	NM_001166398|Armcx2|67416|armadillo repeat containing, X-linked 2	NM_026139|Armcx2|67416|armadillo repeat containing, X-linked 2
mm9_v1_chr14_+_31528352_31528352	0.583657	CUUUGGU	AK160573|Sfmbt1|54650|Scm-like with four mbt domains 1	NM_001166531|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr17_-_32421025_32421067	0.571619	CUUUGGU	BC082782|Brd4|57261|bromodomain containing 4	AK147545|Brd4|57261|bromodomain containing 4	BC138835|Brd4|57261|bromodomain containing 4	BC138834|Brd4|57261|bromodomain containing 4	AF461395|Brd4|57261|bromodomain containing 4	AF461396|Brd4|57261|bromodomain containing 4	NM_020508|Brd4|57261|bromodomain containing 4	NM_198094|Brd4|57261|bromodomain containing 4
mm9_v1_chr13_+_119503505_119503505	0.571039	CUUUGGU	AK045267|Fgf10|14165|fibroblast growth factor 10	NM_008002|Fgf10|14165|fibroblast growth factor 10
mm9_v1_chr18_+_10325174_10325177	0.56768	CUUUGGU	AK142556|Greb1l|381157|growth regulation by estrogen in breast cancer-like	NM_001083628|Greb1l|381157|growth regulation by estrogen in breast cancer-like
mm9_v1_chr3_-_63768461_63768654	0.561956	CUUUGGU	AK144703|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	AK135092|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	BC063104|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	AK136323|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	BC054395|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1	NM_015728|Slc33a1|11416|solute carrier family 33 (acetyl-CoA transporter), member 1
mm9_v1_chr3_+_116215963_116215996	0.560108	CUUUGGU	AK165959|Dbt|13171|dihydrolipoamide branched chain transacylase E2	NM_010022|Dbt|13171|dihydrolipoamide branched chain transacylase E2
mm9_v1_chr16_-_22265901_22266018	0.553545	CUUUGGU	BC057996|Tra2b|20462|transformer 2 beta homolog (Drosophila)	X80232|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC086795|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK080378|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK169483|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152519|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167387|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK077418|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC061177|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK150007|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK049573|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152761|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167544|Tra2b|20462|transformer 2 beta homolog (Drosophila)	NM_009186|Tra2b|20462|transformer 2 beta homolog (Drosophila)
mm9_v1_chr9_+_59139356_59139442	0.547122	CUUUGGU	AK048904|Adpgk|72141|ADP-dependent glucokinase	AK167634|Adpgk|72141|ADP-dependent glucokinase	NM_028121|Adpgk|72141|ADP-dependent glucokinase	BC094657|Adpgk|72141|ADP-dependent glucokinase	BC021526|Adpgk|72141|ADP-dependent glucokinase	AK149942|Adpgk|72141|ADP-dependent glucokinase	AK011434|Adpgk|72141|ADP-dependent glucokinase	AK169590|Adpgk|72141|ADP-dependent glucokinase	AK162169|Adpgk|72141|ADP-dependent glucokinase
mm9_v1_chr18_-_38760921_38761068	0.542615	CUUUGGU	BC050944|Spry4|24066|sprouty homolog 4 (Drosophila)	BC057005|Spry4|24066|sprouty homolog 4 (Drosophila)	NM_011898|Spry4|24066|sprouty homolog 4 (Drosophila)	AK139816|Spry4|24066|sprouty homolog 4 (Drosophila)	AB019280|Spry4|24066|sprouty homolog 4 (Drosophila)	AK037180|Spry4|24066|sprouty homolog 4 (Drosophila)	AK048122|Spry4|24066|sprouty homolog 4 (Drosophila)	AF176906|Spry4|24066|sprouty homolog 4 (Drosophila)
mm9_v1_chr5_+_138070341_138070466	0.53913	CUUUGGU	NM_001168652|Lrch4|231798|leucine-rich repeats and calponin homology (CH) domain containing 4	NM_146164|Lrch4|231798|leucine-rich repeats and calponin homology (CH) domain containing 4	AK088331|Lrch4|231798|leucine-rich repeats and calponin homology (CH) domain containing 4	AK158025|Lrch4-sap25|100316903|Lrch4-Sap25 gene	BC012525|Lrch4|231798|leucine-rich repeats and calponin homology (CH) domain containing 4
mm9_v1_chr9_-_59598416_59598455	0.538146	CUUUGGU	BC037443|Senp8|71599|SUMO/sentrin specific peptidase 8	AK018606|Senp8|71599|SUMO/sentrin specific peptidase 8	AK029856|Senp8|71599|SUMO/sentrin specific peptidase 8	AK049120|Senp8|71599|SUMO/sentrin specific peptidase 8	AK136214|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172068|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172069|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172070|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172071|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_027838|Senp8|71599|SUMO/sentrin specific peptidase 8
mm9_v1_chr10_+_80085486_80085637	0.536953	CUUUGGU	AK152413|Csnk1g2|103236|casein kinase 1, gamma 2	NM_134002|Csnk1g2|103236|casein kinase 1, gamma 2	BC004839|Csnk1g2|103236|casein kinase 1, gamma 2	BC035440|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr5_+_129525943_129526053	0.533013	CUUUGGU	AK002436|Ran|19384|RAN, member RAS oncogene family	NM_009391|Ran|19384|RAN, member RAS oncogene family	S83456|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr11_-_120239930_120240089	0.529875	CUUUGGU	BC034203|2310003H01Rik|71885|RIKEN cDNA 2310003H01 gene	AK009114|2310003H01Rik|71885|RIKEN cDNA 2310003H01 gene	AK148234|2310003H01Rik|71885|RIKEN cDNA 2310003H01 gene	AK147900|2310003H01Rik|71885|RIKEN cDNA 2310003H01 gene	AK165631|2310003H01Rik|71885|RIKEN cDNA 2310003H01 gene	AK082976|2310003H01Rik|71885|RIKEN cDNA 2310003H01 gene	NM_027980|2310003H01Rik|71885|RIKEN cDNA 2310003H01 gene
mm9_v1_chr8_+_108692750_108692777	0.528813	CUUUGGU	AK165979|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK165629|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK053899|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK030762|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK046548|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK049478|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK164666|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	NM_178798|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK157379|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chr4_-_9596206_9596308	0.517555	CUUUGGU	BC015281|Asph|65973|aspartate-beta-hydroxylase	AF289486|Asph|65973|aspartate-beta-hydroxylase	AF289487|Asph|65973|aspartate-beta-hydroxylase	AF289488|Asph|65973|aspartate-beta-hydroxylase	AK030293|Asph|65973|aspartate-beta-hydroxylase	AK032420|Asph|65973|aspartate-beta-hydroxylase	AK151787|Asph|65973|aspartate-beta-hydroxylase	AK049506|Asph|65973|aspartate-beta-hydroxylase	AK139566|Asph|65973|aspartate-beta-hydroxylase	AK160984|Asph|65973|aspartate-beta-hydroxylase	AK165260|Asph|65973|aspartate-beta-hydroxylase	BC061098|Asph|65973|aspartate-beta-hydroxylase	NM_001177849|Asph|65973|aspartate-beta-hydroxylase	NM_001177850|Asph|65973|aspartate-beta-hydroxylase	NM_001177851|Asph|65973|aspartate-beta-hydroxylase	NM_001177855|Asph|65973|aspartate-beta-hydroxylase	NM_001177856|Asph|65973|aspartate-beta-hydroxylase	NM_023066|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr5_+_30890386_30890554	0.510804	CUUUGGU	AF065162|Kcnk3|16527|potassium channel, subfamily K, member 3	BC032047|Kcnk3|16527|potassium channel, subfamily K, member 3	NM_010608|Kcnk3|16527|potassium channel, subfamily K, member 3	AB013345|Kcnk3|16527|potassium channel, subfamily K, member 3
mm9_v1_chr19_-_44144175_44144240	0.504244	CUUUGGU	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr13_-_17896909_17896930	0.493249	CUUUGGU	AK173265|Cdk13|69562|cyclin-dependent kinase 13	NM_001081058|Cdk13|69562|cyclin-dependent kinase 13	NM_027118|Cdk13|69562|cyclin-dependent kinase 13
mm9_v1_chr4_+_47366162_47366183	0.492979	CUUUGGU	BC063260|Tgfbr1|21812|transforming growth factor, beta receptor I	NM_009370|Tgfbr1|21812|transforming growth factor, beta receptor I	D25540|Tgfbr1|21812|transforming growth factor, beta receptor I	CT010393|Tgfbr1|21812|transforming growth factor, beta receptor I	D28526|Tgfbr1|21812|transforming growth factor, beta receptor I
mm9_v1_chr15_-_96291163_96291288	0.487714	CUUUGGU	AK129478|Scaf11|72193|SR-related CTD-associated factor 11	AK034674|Scaf11|72193|SR-related CTD-associated factor 11	BC058682|Scaf11|72193|SR-related CTD-associated factor 11	NM_028148|Scaf11|72193|SR-related CTD-associated factor 11
mm9_v1_chr13_-_94269616_94269653	0.48699	CUUUGGU	BC069906|Jmy|57748|junction-mediating and regulatory protein	BC090835|Jmy|57748|junction-mediating and regulatory protein	NM_021310|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr4_-_133309484_133309525	0.484243	CUUUGGU	NM_001080819|Arid1a|93760|AT rich interactive domain 1A (SWI-like)
mm9_v1_chr12_+_85983845_85983845	0.479257	CUUUGGU	BC103771|Vrtn|432677|vertebrae development homolog (pig)	NM_001033776|Vrtn|432677|vertebrae development homolog (pig)
mm9_v1_chr14_+_69647294_69647485	0.478635	CUUUGGU	AF099098|Stc1|20855|stanniocalcin 1	BC021425|Stc1|20855|stanniocalcin 1	AK134260|Stc1|20855|stanniocalcin 1	NM_009285|Stc1|20855|stanniocalcin 1	AK142220|Stc1|20855|stanniocalcin 1	AK149293|Stc1|20855|stanniocalcin 1	AK149351|Stc1|20855|stanniocalcin 1	AK161960|Stc1|20855|stanniocalcin 1
mm9_v1_chr2_+_20441139_20441459	0.443451	CUUUGGU	NM_001177630|Etl4|208618|enhancer trap locus 4	NM_001177631|Etl4|208618|enhancer trap locus 4	AK147510|Etl4|208618|enhancer trap locus 4	AB093289|Etl4|208618|enhancer trap locus 4	BC158051|Etl4|208618|enhancer trap locus 4	BC172143|Etl4|208618|enhancer trap locus 4	BC050016|Etl4|208618|enhancer trap locus 4	AK052733|Etl4|208618|enhancer trap locus 4
mm9_v1_chr3_-_100489393_100489406	0.42111	CUUUGGU	AK153336|Man1a2|17156|mannosidase, alpha, class 1A, member 2	NM_010763|Man1a2|17156|mannosidase, alpha, class 1A, member 2
mm9_v1_chr19_+_32832002_32832163	0.41469	CUUUGGU	NM_008960|Pten|19211|phosphatase and tensin homolog	AK164302|Pten|19211|phosphatase and tensin homolog	AK088717|Pten|19211|phosphatase and tensin homolog	AK076980|Pten|19211|phosphatase and tensin homolog
mm9_v1_chr7_-_128850659_128850766	0.402173	CUUUGGU	NM_001033173|Usp31|76179|ubiquitin specific peptidase 31
mm9_v1_chr12_+_113960379_113960418	0.402056	CUUUGGU	NM_001024602|AW555464|217882|expressed sequence AW555464	AK122236|AW555464|217882|expressed sequence AW555464
mm9_v1_chr5_+_122734363_122734418	0.398654	CUUUGGU	AK135118|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK083481|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK078914|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	BC068149|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	NM_177242|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)
mm9_v1_chr10_+_128227964_128228056	0.390875	CUUUGGU	AK079924|Mmp19|58223|matrix metallopeptidase 19	NM_001164197|Mmp19|58223|matrix metallopeptidase 19	AK080125|Mmp19|58223|matrix metallopeptidase 19	AK136517|Mmp19|58223|matrix metallopeptidase 19	NM_021412|Mmp19|58223|matrix metallopeptidase 19	AK154863|Mmp19|58223|matrix metallopeptidase 19	AF155221|Mmp19|58223|matrix metallopeptidase 19	AF162446|Mmp19|58223|matrix metallopeptidase 19	BC112966|Mmp19|58223|matrix metallopeptidase 19	AF153199|Mmp19|58223|matrix metallopeptidase 19
mm9_v1_chr10_+_18127443_18127504	0.390495	CUUUGGU	AK041760|Nhsl1|215819|NHS-like 1	AK017530|Nhsl1|215819|NHS-like 1	NM_173390|Nhsl1|215819|NHS-like 1	AK038892|Nhsl1|215819|NHS-like 1
mm9_v1_chr9_-_44575861_44575929	0.386626	CUUUGGU	BC034754|Arcn1|213827|archain 1	BC083152|Arcn1|213827|archain 1	BC017124|Arcn1|213827|archain 1	AK031385|Arcn1|213827|archain 1	BC033387|Arcn1|213827|archain 1	NM_145985|Arcn1|213827|archain 1	AK154066|Arcn1|213827|archain 1	AK028556|Arcn1|213827|archain 1	AK128973|Arcn1|213827|archain 1	BC023728|Arcn1|213827|archain 1	AK147747|Arcn1|213827|archain 1	AK047995|Arcn1|213827|archain 1
mm9_v1_chr8_-_125201971_125202083	0.383489	CUUUGGU	AK033680|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	AK041887|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	NM_001109873|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	NM_177289|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm9_v1_chr11_+_93905501_93905545	0.377712	CUUUGGU	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr8_-_87211726_87211763	0.36905	CUUUGGU	BC048157|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AK012935|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC052706|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC054800|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	NM_025788|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm9_v1_chr1_-_72258684_72258880	0.367739	CUUUGGU	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr14_-_47809063_47809127	0.363249	CUUUGGU	L09737|Gch1|14528|GTP cyclohydrolase 1	BC005643|Gch1|14528|GTP cyclohydrolase 1	NM_008102|Gch1|14528|GTP cyclohydrolase 1	BC069921|Gch1|14528|GTP cyclohydrolase 1	AK150657|Gch1|14528|GTP cyclohydrolase 1	AK152571|Gch1|14528|GTP cyclohydrolase 1
mm9_v1_chr14_+_31528034_31528081	0.363246	CUUUGGU	NM_019460|Sfmbt1|54650|Scm-like with four mbt domains 1	BC066188|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr6_+_29997972_29998071	0.362241	CUUUGGU	AK082580|Nrf1|18181|nuclear respiratory factor 1	NM_001164226|Nrf1|18181|nuclear respiratory factor 1	NM_001164227|Nrf1|18181|nuclear respiratory factor 1	NM_001164228|Nrf1|18181|nuclear respiratory factor 1	NM_001164230|Nrf1|18181|nuclear respiratory factor 1	NM_010938|Nrf1|18181|nuclear respiratory factor 1	AK029034|Nrf1|18181|nuclear respiratory factor 1	AK014494|Nrf1|18181|nuclear respiratory factor 1	AK036604|Nrf1|18181|nuclear respiratory factor 1	AK037697|Nrf1|18181|nuclear respiratory factor 1	AF098077|Nrf1|18181|nuclear respiratory factor 1	AF064728|Nrf1|18181|nuclear respiratory factor 1	AK050861|Nrf1|18181|nuclear respiratory factor 1	AK134483|Nrf1|18181|nuclear respiratory factor 1
mm9_v1_chr11_+_74433092_74433113	0.362122	CUUUGGU	AK143211|E130309D14Rik|432582|RIKEN cDNA E130309D14 gene	NM_001013784|E130309D14Rik|432582|RIKEN cDNA E130309D14 gene
mm9_v1_chr10_-_18735154_18735215	0.359492	CUUUGGU	AK153238|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK088297|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK151921|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC050259|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC054806|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	BC060221|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	NM_009397|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3
mm9_v1_chr10_+_80092400_80092421	0.347472	CUUUGGU	AK132871|Csnk1g2|103236|casein kinase 1, gamma 2	NM_001159591|Csnk1g2|103236|casein kinase 1, gamma 2	AK077076|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr8_+_95484831_95484945	0.3349	CUUUGGU	AY525777|Slc6a2|20538|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	AY525778|Slc6a2|20538|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	NM_009209|Slc6a2|20538|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
mm9_v1_chr11_+_54251680_54251744	0.331008	CUUUGGU	NM_173753|Fnip1|216742|folliculin interacting protein 1	BC079892|Fnip1|216742|folliculin interacting protein 1	AK122574|Fnip1|216742|folliculin interacting protein 1
mm9_v1_chr4_+_132925684_132925804	0.324474	CUUUGGU	AK150135|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	AK165501|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	NM_016981|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1	BC052708|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm9_v1_chr4_+_17780628_17780643	0.302734	CUUUGGU	BC057926|Mmp16|17389|matrix metallopeptidase 16	NM_019724|Mmp16|17389|matrix metallopeptidase 16
mm9_v1_chr2_-_168592528_168592700	0.297514	CUUUGGU	AY463371|Sall4|99377|sal-like 4 (Drosophila)	AY463372|Sall4|99377|sal-like 4 (Drosophila)	AY463373|Sall4|99377|sal-like 4 (Drosophila)	AK049188|Sall4|99377|sal-like 4 (Drosophila)	AK145388|Sall4|99377|sal-like 4 (Drosophila)	BC099928|Sall4|99377|sal-like 4 (Drosophila)	BC053716|Sall4|99377|sal-like 4 (Drosophila)	NM_175303|Sall4|99377|sal-like 4 (Drosophila)	NM_201395|Sall4|99377|sal-like 4 (Drosophila)	NM_201396|Sall4|99377|sal-like 4 (Drosophila)
mm9_v1_chr3_+_54916015_54916063	0.283267	CUUUGGU	AK159951|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_001144988|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_144895|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	AK129171|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	BC022921|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	AK087388|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm9_v1_chr2_+_71711274_71711402	0.283142	CUUUGGU	AK046805|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK153649|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	NM_172665|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK163553|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC027196|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK028017|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK085215|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC025480|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1
mm9_v1_chr15_+_76369247_76369393	0.277932	CUUUGGU	AK161447|Gpr172b|52710|G protein-coupled receptor 172B	AK142597|Gpr172b|52710|G protein-coupled receptor 172B	AK080449|Gpr172b|52710|G protein-coupled receptor 172B	BC016264|Gpr172b|52710|G protein-coupled receptor 172B	AK152335|Gpr172b|52710|G protein-coupled receptor 172B	AK029579|Gpr172b|52710|G protein-coupled receptor 172B	NM_029643|Gpr172b|52710|G protein-coupled receptor 172B	AK008081|Gpr172b|52710|G protein-coupled receptor 172B	AK032015|Gpr172b|52710|G protein-coupled receptor 172B
mm9_v1_chr8_-_97855675_97855849	0.268397	CUUUGGU	BC033441|Zfp319|79233|zinc finger protein 319	AK052274|Zfp319|79233|zinc finger protein 319	AK089263|Zfp319|79233|zinc finger protein 319	AK048624|Zfp319|79233|zinc finger protein 319	BC059823|Zfp319|79233|zinc finger protein 319	NM_024467|Zfp319|79233|zinc finger protein 319
mm9_v1_chr2_+_119500777_119500991	0.267921	CUUUGGU	NM_030112|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC048535|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC022717|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC038032|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC117848|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC117849|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK177377|Rtf1|76246|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr1_+_134314029_134314184	0.264837	CUUUGGU	NM_172516|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK083696|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AY429676|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK020880|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	BC130226|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK132119|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK172954|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AY208852|Dstyk|213452|dual serine/threonine and tyrosine protein kinase	AK145449|Dstyk|213452|dual serine/threonine and tyrosine protein kinase
mm9_v1_chr15_-_79377170_79377216	0.260796	CUUUGGU	BC096036|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	NM_001040187|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	NM_199080|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr10_-_128133261_128133372	0.25951	CUUUGGU	AK144551|Rab5b|19344|RAB5B, member RAS oncogene family	AK083034|Rab5b|19344|RAB5B, member RAS oncogene family	AK081251|Rab5b|19344|RAB5B, member RAS oncogene family	NM_177411|Rab5b|19344|RAB5B, member RAS oncogene family
mm9_v1_chr15_-_81688686_81688755	0.256309	CUUUGGU	BC094031|Tob2|57259|transducer of ERBB2, 2	BC021869|Tob2|57259|transducer of ERBB2, 2	AK049766|Tob2|57259|transducer of ERBB2, 2	AK080817|Tob2|57259|transducer of ERBB2, 2	AK143542|Tob2|57259|transducer of ERBB2, 2	AK037631|Tob2|57259|transducer of ERBB2, 2	AK044623|Tob2|57259|transducer of ERBB2, 2	NM_020507|Tob2|57259|transducer of ERBB2, 2
mm9_v1_chr3_+_19957807_19957987	0.253755	CUUUGGU	NM_009210|Hltf|20585|helicase-like transcription factor	NM_144959|Hltf|20585|helicase-like transcription factor	AK141235|Hltf|20585|helicase-like transcription factor	AF010600|Hltf|20585|helicase-like transcription factor	AF165911|Hltf|20585|helicase-like transcription factor	BC057116|Hltf|20585|helicase-like transcription factor	BC059240|Hltf|20585|helicase-like transcription factor	AK142961|Hltf|20585|helicase-like transcription factor	AK166911|Hltf|20585|helicase-like transcription factor	AB221636|Hltf|20585|helicase-like transcription factor
mm9_v1_chr3_+_54916066_54916113	0.251028	CUUUGGU	AK147760|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_001144987|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm9_v1_chr6_+_120314116_120314182	0.248187	CUUUGGU	AK041568|Kdm5a|214899|lysine (K)-specific demethylase 5A	NM_145997|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK166055|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK159079|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK144877|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK139619|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK046187|Kdm5a|214899|lysine (K)-specific demethylase 5A	BC011506|Kdm5a|214899|lysine (K)-specific demethylase 5A
mm9_v1_chr3_+_33919000_33919031	0.247787	CUUUGGU	NM_001113188|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_001113189|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_008053|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	X90875|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	BC019139|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog
mm9_v1_chr13_-_55464135_55464143	0.242059	CUUUGGU	BC055327|Lman2|66890|lectin, mannose-binding 2	NM_025828|Lman2|66890|lectin, mannose-binding 2
mm9_v1_chr17_+_26250190_26250324	0.229218	CUUUGGU	AK044384|Tmem8|60455|transmembrane protein 8 (five membrane-spanning domains)	NM_021793|Tmem8|60455|transmembrane protein 8 (five membrane-spanning domains)	AB045293|Tmem8|60455|transmembrane protein 8 (five membrane-spanning domains)
mm9_v1_chr7_-_73834420_73834446	0.215035	CUUUGGU	BC085155|Asb7|117589|ankyrin repeat and SOCS box-containing 7	NM_080443|Asb7|117589|ankyrin repeat and SOCS box-containing 7
mm9_v1_chr8_+_13105702_13105757	0.208717	CUUUGGU	NM_146207|Cul4a|99375|cullin 4A	AK144802|Cul4a|99375|cullin 4A	AK166251|Cul4a|99375|cullin 4A	AK170722|Cul4a|99375|cullin 4A	AK168215|Cul4a|99375|cullin 4A	AK084008|Cul4a|99375|cullin 4A	BC010211|Cul4a|99375|cullin 4A	AK150237|Cul4a|99375|cullin 4A
mm9_v1_chr17_+_25359526_25359671	0.204415	CUUUGGU	AK004898|Unkl|74154|unkempt-like (Drosophila)	NM_028789|Unkl|74154|unkempt-like (Drosophila)	BC150842|Unkl|74154|unkempt-like (Drosophila)
mm9_v1_chr3_-_104315778_104315782	0.202252	CUUUGGU	AK036116|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2	NM_001025067|Lrig2|269473|leucine-rich repeats and immunoglobulin-like domains 2
mm9_v1_chr8_-_86671651_86671718	0.20221	CUUUGGU	BC016188|Cc2d1a|212139|coiled-coil and C2 domain containing 1A	NM_145970|Cc2d1a|212139|coiled-coil and C2 domain containing 1A
mm9_v1_chr12_-_119539909_119539930	0.18074	CUUUGGU	NM_001166385|Sp4|20688|trans-acting transcription factor 4	NM_009239|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr6_-_50406080_50406168	0.180598	CUUUGGU	BC086485|Osbpl3|71720|oxysterol binding protein-like 3	AK160310|Osbpl3|71720|oxysterol binding protein-like 3	NM_001163645|Osbpl3|71720|oxysterol binding protein-like 3
mm9_v1_chr17_+_69733141_69733317	0.180543	CUUUGGU	AK082051|Zfp161|22666|zinc finger protein 161	AK037725|Zfp161|22666|zinc finger protein 161	AK136762|Zfp161|22666|zinc finger protein 161	BC052017|Zfp161|22666|zinc finger protein 161	NM_009547|Zfp161|22666|zinc finger protein 161
mm9_v1_chr2_+_3201446_3201559	0.171397	CUUUGGU	AK161490|Nmt2|18108|N-myristoyltransferase 2	AK168171|Nmt2|18108|N-myristoyltransferase 2	AK168190|Nmt2|18108|N-myristoyltransferase 2	AK134521|Nmt2|18108|N-myristoyltransferase 2	AK044213|Nmt2|18108|N-myristoyltransferase 2	AF043327|Nmt2|18108|N-myristoyltransferase 2	BC037647|Nmt2|18108|N-myristoyltransferase 2	NM_008708|Nmt2|18108|N-myristoyltransferase 2
mm9_v1_chr15_-_76181440_76181552	0.164908	CUUUGGU	AK171774|Sharpin|106025|SHANK-associated RH domain interacting protein	BC016203|Sharpin|106025|SHANK-associated RH domain interacting protein	AK165824|Sharpin|106025|SHANK-associated RH domain interacting protein	AB052763|Sharpin|106025|SHANK-associated RH domain interacting protein	BC055758|Sharpin|106025|SHANK-associated RH domain interacting protein	NM_025340|Sharpin|106025|SHANK-associated RH domain interacting protein
mm9_v1_chr13_-_54789548_54789560	0.161905	CUUUGGU	AK171943|Rnf44|105239|ring finger protein 44	AK172257|Rnf44|105239|ring finger protein 44	NM_001146027|Rnf44|105239|ring finger protein 44
mm9_v1_chr11_-_35647952_35648029	0.160016	CUUUGGU	BC020132|Rars|104458|arginyl-tRNA synthetase	AK076160|Rars|104458|arginyl-tRNA synthetase	AK149856|Rars|104458|arginyl-tRNA synthetase	AK152108|Rars|104458|arginyl-tRNA synthetase	AK160216|Rars|104458|arginyl-tRNA synthetase	AK166097|Rars|104458|arginyl-tRNA synthetase	AK168194|Rars|104458|arginyl-tRNA synthetase	AK011383|Rars|104458|arginyl-tRNA synthetase	NM_025936|Rars|104458|arginyl-tRNA synthetase
mm9_v1_chr8_+_74012001_74012001	0.155535	CUUUGGU	AF361482|Gtpbp3|70359|GTP binding protein 3	NM_032544|Gtpbp3|70359|GTP binding protein 3
mm9_v1_chr7_+_13551210_13551218	0.150607	CUUUGGU	BC053093|Zfp324|243834|zinc finger protein 324	NM_178732|Zfp324|243834|zinc finger protein 324	AK054407|Zfp324|243834|zinc finger protein 324	AK044240|Zfp324|243834|zinc finger protein 324	AK165922|Zfp324|243834|zinc finger protein 324
mm9_v1_chr6_+_38501333_38501546	0.144693	CUUUGGU	AK046307|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK044839|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170848|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170849|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_138680|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK155264|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056383|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056354|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056970|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK166155|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK147889|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AF318301|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK038543|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK048581|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK053863|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK134191|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr1_-_10222750_10222750	0.138566	CUUUGGU	NM_001102430|Arfgef1|211673|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm9_v1_chr13_-_54789148_54789168	0.131337	CUUUGGU	AK147349|Rnf44|105239|ring finger protein 44	NM_001146025|Rnf44|105239|ring finger protein 44	NM_001146026|Rnf44|105239|ring finger protein 44	NM_134064|Rnf44|105239|ring finger protein 44
mm9_v1_chr14_-_103381744_103381856	0.101354	CUUUGGU	BC116647|Kctd12|239217|potassium channel tetramerisation domain containing 12	BC116648|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK035535|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK172581|Kctd12|239217|potassium channel tetramerisation domain containing 12	NM_177715|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK087895|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr1_+_107677241_107677394	0.0993694	CUUUGGU	AK138990|Tnfrsf11a|21934|tumor necrosis factor receptor superfamily, member 11a	NM_009399|Tnfrsf11a|21934|tumor necrosis factor receptor superfamily, member 11a	AF019046|Tnfrsf11a|21934|tumor necrosis factor receptor superfamily, member 11a	BC019185|Tnfrsf11a|21934|tumor necrosis factor receptor superfamily, member 11a	AK020374|Tnfrsf11a|21934|tumor necrosis factor receptor superfamily, member 11a
mm9_v1_chr15_+_101004502_101004580	0.0978672	CUUUGGU	BC145775|Acvr1b|11479|activin A receptor, type 1B	BC145777|Acvr1b|11479|activin A receptor, type 1B	AK154578|Acvr1b|11479|activin A receptor, type 1B	AK157910|Acvr1b|11479|activin A receptor, type 1B	NM_007395|Acvr1b|11479|activin A receptor, type 1B	BC059832|Acvr1b|11479|activin A receptor, type 1B	Z31663|Acvr1b|11479|activin A receptor, type 1B
mm9_v1_chr1_-_184271729_184271762	0.0977779	CUUUGGU	BC094542|Fbxo28|67948|F-box protein 28	NM_175127|Fbxo28|67948|F-box protein 28	AK076211|Fbxo28|67948|F-box protein 28	AK077653|Fbxo28|67948|F-box protein 28
mm9_v1_chr8_-_71259021_71259065	0.0932489	CUUUGGU	BC089162|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1	NM_172753|Csgalnact1|234356|chondroitin sulfate N-acetylgalactosaminyltransferase 1
mm9_v1_chr3_-_144382959_144383365	0.0919864	CUUUGGU	AK029647|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	AK158415|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	AK011371|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	AK004590|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	BC024362|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	AK172959|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	AK146246|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	AF263364|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	AF272946|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	DQ205686|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)	NM_019464|Sh3glb1|54673|SH3-domain GRB2-like B1 (endophilin)
mm9_v1_chr11_+_84693721_84693889	0.0871894	CUUUGGU	BC060115|Myo19|66196|myosin XIX	NM_025414|Myo19|66196|myosin XIX	AK080117|Myo19|66196|myosin XIX	AK053237|Myo19|66196|myosin XIX	AK053033|Myo19|66196|myosin XIX
mm9_v1_chr14_-_58508974_58509153	0.0811869	CUUUGGU	AK020965|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AY668951|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170139|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK031184|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK139216|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK140182|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK049270|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK163174|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK017158|Zdhhc20|75965|zinc finger, DHHC domain containing 20	NM_029492|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK151840|Zdhhc20|75965|zinc finger, DHHC domain containing 20	AK170017|Zdhhc20|75965|zinc finger, DHHC domain containing 20	BC019536|Zdhhc20|75965|zinc finger, DHHC domain containing 20
mm9_v1_chr15_+_85565935_85565993	0.0803223	CUUUGGU	AK081709|Ppara|19013|peroxisome proliferator activated receptor alpha	NM_001113418|Ppara|19013|peroxisome proliferator activated receptor alpha
mm9_v1_chr6_-_71390592_71390638	0.0742628	CUUUGGU	AK164384|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	NM_024288|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr15_+_84867491_84867575	0.0646856	CUUUGGU	NM_133750|Fam118a|73225|family with sequence similarity 118, member A	NM_177067|Fam118a|73225|family with sequence similarity 118, member A	AK143690|Fam118a|73225|family with sequence similarity 118, member A	AK082151|Fam118a|73225|family with sequence similarity 118, member A	BC066174|Fam118a|73225|family with sequence similarity 118, member A
mm9_v1_chr6_-_72566993_72566993	0.0599256	CUUUGGU	AK076586|Tgoln1|22134|trans-golgi network protein	NM_009443|Tgoln1|22134|trans-golgi network protein
mm9_v1_chr10_-_20444654_20444883	0.0592973	CUUUGGU	AF190639|Pde7b|29863|phosphodiesterase 7B	BC130267|Pde7b|29863|phosphodiesterase 7B	AK020137|Pde7b|29863|phosphodiesterase 7B	AK040876|Pde7b|29863|phosphodiesterase 7B	NM_013875|Pde7b|29863|phosphodiesterase 7B	AK035385|Pde7b|29863|phosphodiesterase 7B
mm9_v1_chr8_-_4275880_4275909	0.0572636	CUUUGGU	BC023454|Timm44|21856|translocase of inner mitochondrial membrane 44	BC043479|Timm44|21856|translocase of inner mitochondrial membrane 44	BC117523|Timm44|21856|translocase of inner mitochondrial membrane 44	BC117524|Timm44|21856|translocase of inner mitochondrial membrane 44	U69898|Timm44|21856|translocase of inner mitochondrial membrane 44	BC110677|Timm44|21856|translocase of inner mitochondrial membrane 44	NM_011592|Timm44|21856|translocase of inner mitochondrial membrane 44	AK153866|Timm44|21856|translocase of inner mitochondrial membrane 44
mm9_v1_chr19_-_32423805_32423805	0.0522999	CUUUGGU	BC076618|Sgms1|208449|sphingomyelin synthase 1	NM_001168525|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr12_+_81745188_81745226	0.0477752	CUUUGGU	NM_026244|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK090062|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK080462|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	BC072655|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9	AK008025|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr6_-_118147735_118147761	0.0467395	CUUUGGU	BC059012|Ret|19713|ret proto-oncogene	NM_001080780|Ret|19713|ret proto-oncogene	NM_009050|Ret|19713|ret proto-oncogene
mm9_v1_chr16_-_94509462_94509462	0.0433272	CUUUGGU	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr8_-_98331280_98331397	0.0353818	CUUUGGU	BC157948|Cnot1|234594|CCR4-NOT transcription complex, subunit 1	BC158073|Cnot1|234594|CCR4-NOT transcription complex, subunit 1	BC172105|Cnot1|234594|CCR4-NOT transcription complex, subunit 1	BC058249|Cnot1|234594|CCR4-NOT transcription complex, subunit 1	AK086041|Cnot1|234594|CCR4-NOT transcription complex, subunit 1	AK169894|Cnot1|234594|CCR4-NOT transcription complex, subunit 1	NM_153164|Cnot1|234594|CCR4-NOT transcription complex, subunit 1	NM_178078|Cnot1|234594|CCR4-NOT transcription complex, subunit 1
mm9_v1_chr14_-_64127928_64127993	0.0249729	CUUUGGU	BC058860|Tdh|58865|L-threonine dehydrogenase	NM_021480|Tdh|58865|L-threonine dehydrogenase
mm9_v1_chr8_-_46467524_46467644	0.0192535	CUUUGGU	BC035537|Fam149a|212326|family with sequence similarity 149, member A	AK141607|Fam149a|212326|family with sequence similarity 149, member A	AK140440|Fam149a|212326|family with sequence similarity 149, member A	NM_153535|Fam149a|212326|family with sequence similarity 149, member A
mm9_v1_chr16_+_91648068_91648092	0.0192146	CUUUGGU	NM_019973|Son|20658|Son DNA binding protein	NM_178880|Son|20658|Son DNA binding protein
mm9_v1_chr7_-_133618335_133618666	0.0116682	CUUUGGU	AF020526|Sh2b1|20399|SH2B adaptor protein 1	AF380422|Sh2b1|20399|SH2B adaptor protein 1	AF421138|Sh2b1|20399|SH2B adaptor protein 1	AF421139|Sh2b1|20399|SH2B adaptor protein 1	BC051978|Sh2b1|20399|SH2B adaptor protein 1	AK154655|Sh2b1|20399|SH2B adaptor protein 1	AK148085|Sh2b1|20399|SH2B adaptor protein 1	AK168439|Sh2b1|20399|SH2B adaptor protein 1	AK170444|Sh2b1|20399|SH2B adaptor protein 1	AK171328|Sh2b1|20399|SH2B adaptor protein 1	NM_001081459|Sh2b1|20399|SH2B adaptor protein 1	NM_011363|Sh2b1|20399|SH2B adaptor protein 1
mm9_v1_chr5_-_89104575_89104676	0.00669106	CUUUGGU	AK168385|Grsf1|231413|G-rich RNA sequence binding factor 1	AK168459|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_001098476|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr8_+_86590718_86590827	0.00579047	CUUUGGU	AK147790|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK036208|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK044607|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	NM_009055|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	BC057018|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	AK083571|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)	X76088|Rfx1|19724|regulatory factor X, 1 (influences HLA class II expression)
