mm9_v1_chrX_+_54032914_54032920	26.1007	CUX2.p2	BC029024|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr15_-_8660442_8660451	25.1626	CUX2.p2	AK084968|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr15_-_8660462_8660476	23.4113	CUX2.p2	AK031831|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK040798|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK049090|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK082736|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	U75377|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr3_+_68376319_68376428	20.9657	CUX2.p2	BC060529|Schip1|30953|schwannomin interacting protein 1	AK021361|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr15_-_8660479_8660490	20.8339	CUX2.p2	AK045949|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK080879|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr15_-_8660729_8660806	19.4149	CUX2.p2	BC058711|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_148938|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr3_+_68376289_68376313	19.1813	CUX2.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr15_-_90764873_90764944	18.2835	CUX2.p2	AK052821|Kif21a|16564|kinesin family member 21A	AK047208|Kif21a|16564|kinesin family member 21A
mm9_v1_chrX_+_54032858_54032889	17.0062	CUX2.p2	NM_001077362|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr1_-_164796609_164796656	13.7959	CUX2.p2	U87456|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chr8_-_70342105_70342226	13.0031	CUX2.p2	BC131913|Psd3|234353|pleckstrin and Sec7 domain containing 3	BC145641|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK031477|Psd3|234353|pleckstrin and Sec7 domain containing 3	AK147606|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_027626|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr15_-_8660393_8660418	8.12995	CUX2.p2	BC028638|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	BC066154|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	AK045716|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr3_+_19869841_19869871	7.73752	CUX2.p2	AK160035|Cp|12870|ceruloplasmin
mm9_v1_chr14_+_14286471_14286627	7.11195	CUX2.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr18_+_57628139_57628180	6.8147	CUX2.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr1_+_45368443_45368526	6.73366	CUX2.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chrX_-_40627962_40627962	5.37925	CUX2.p2	AB025410|Odz1|23963|odd Oz/ten-m homolog 1 (Drosophila)	NM_011855|Odz1|23963|odd Oz/ten-m homolog 1 (Drosophila)
mm9_v1_chr17_+_86577946_86578063	4.66073	CUX2.p2	
mm9_v1_chr8_+_56040553_56040581	4.34198	CUX2.p2	BC024759|Gpm6a|234267|glycoprotein m6a	BC033394|Gpm6a|234267|glycoprotein m6a	S65735|Gpm6a|234267|glycoprotein m6a	BC029711|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr3_+_19857053_19857266	3.53231	CUX2.p2	BC062957|Cp|12870|ceruloplasmin	NM_001042611|Cp|12870|ceruloplasmin	NM_007752|Cp|12870|ceruloplasmin	DQ336396|Cp|12870|ceruloplasmin	AK014835|Cp|12870|ceruloplasmin	AK043248|Cp|12870|ceruloplasmin	U49430|Cp|12870|ceruloplasmin	AK149523|Cp|12870|ceruloplasmin
mm9_v1_chr15_-_58614642_58614788	3.44209	CUX2.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr10_+_98453513_98453709	3.27858	CUX2.p2	AK053569|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK042547|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr6_-_136824277_136824306	3.27208	CUX2.p2	BC069922|Mgp|17313|matrix Gla protein	BC036991|Mgp|17313|matrix Gla protein	BC079478|Mgp|17313|matrix Gla protein
mm9_v1_chr10_-_62666659_62666699	3.22139	CUX2.p2	AK036458|Mypn|68802|myopalladin	AK220521|Mypn|68802|myopalladin	NM_182992|Mypn|68802|myopalladin
mm9_v1_chr2_-_84615535_84615589	3.2202	CUX2.p2	Y10386|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AF010254|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	NM_009776|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr10_+_68996455_68996596	3.05618	CUX2.p2	NM_146005|Ank3|11735|ankyrin 3, epithelial	NM_170688|Ank3|11735|ankyrin 3, epithelial	NM_170689|Ank3|11735|ankyrin 3, epithelial	NM_170690|Ank3|11735|ankyrin 3, epithelial	NM_170728|Ank3|11735|ankyrin 3, epithelial	NM_170729|Ank3|11735|ankyrin 3, epithelial	NM_170730|Ank3|11735|ankyrin 3, epithelial	AK162547|Ank3|11735|ankyrin 3, epithelial	AK042330|Ank3|11735|ankyrin 3, epithelial	BC021657|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr6_-_127075853_127076093	2.43255	CUX2.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr1_+_11254043_11254083	2.42995	CUX2.p2	AK136059|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	NM_001033636|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	BC139253|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	BC139255|Prex2|109294|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm9_v1_chr4_+_94405963_94405990	2.27933	CUX2.p2	BC050824|Tek|21687|endothelial-specific receptor tyrosine kinase	D13738|Tek|21687|endothelial-specific receptor tyrosine kinase	NM_013690|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr7_-_67285104_67285104	2.17692	CUX2.p2	NM_001082962|Snrpn|20646|small nuclear ribonucleoprotein N
mm9_v1_chr8_+_131028275_131028322	2.09938	CUX2.p2	AK002673|Nrp1|18186|neuropilin 1
mm9_v1_chrX_-_72823345_72823551	1.84463	CUX2.p2	AB232636|Rab39b|67790|RAB39B, member RAS oncogene family	BC052472|Rab39b|67790|RAB39B, member RAS oncogene family	AK039013|Rab39b|67790|RAB39B, member RAS oncogene family	AK048981|Rab39b|67790|RAB39B, member RAS oncogene family	AK160737|Rab39b|67790|RAB39B, member RAS oncogene family	NM_175122|Rab39b|67790|RAB39B, member RAS oncogene family	AK018257|Rab39b|67790|RAB39B, member RAS oncogene family	AK020665|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr10_-_63552994_63553028	1.75488	CUX2.p2	AK036366|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK163753|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035773|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035858|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035882|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	NM_178678|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK032485|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK036180|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3
mm9_v1_chr3_-_113094211_113094366	1.62308	CUX2.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr9_-_102256962_102257026	1.59378	CUX2.p2	BC057301|Ephb1|270190|Eph receptor B1	AK135018|Ephb1|270190|Eph receptor B1	AK033966|Ephb1|270190|Eph receptor B1	AK036211|Ephb1|270190|Eph receptor B1	AK082061|Ephb1|270190|Eph receptor B1	AK039530|Ephb1|270190|Eph receptor B1	NM_001168296|Ephb1|270190|Eph receptor B1	NM_173447|Ephb1|270190|Eph receptor B1
mm9_v1_chr1_-_141982814_141983012	1.56948	CUX2.p2	AK075670|Cfh|12628|complement component factor h	M31980|Cfh|12628|complement component factor h
mm9_v1_chrM_+_13543_13577	1.54138	CUX2.p2	
mm9_v1_chr4_-_136891931_136891995	1.50892	CUX2.p2	AK213611|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	M79301|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L11318|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L78075|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr4_-_36665923_36665995	1.4773	CUX2.p2	BC090619|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166000|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chr6_+_41252267_41252289	1.43143	CUX2.p2	AK003064|Try4|22074|trypsin 4	AK008660|Try4|22074|trypsin 4	AK008667|Try4|22074|trypsin 4	BC061135|Try4|22074|trypsin 4	NM_011646|Try4|22074|trypsin 4	BC050120|Try4|22074|trypsin 4
mm9_v1_chr3_-_113126814_113126969	1.37594	CUX2.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr2_-_30214724_30214844	1.33026	CUX2.p2	AF426314|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC024477|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	NM_139302|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK155248|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152409|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152502|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	EF676083|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK167762|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC028859|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2
mm9_v1_chr3_+_5218545_5218658	1.00962	CUX2.p2	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr4_-_96220294_96220351	0.968564	CUX2.p2	AK045421|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	BC050832|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK033614|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	NM_010008|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK084025|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6
mm9_v1_chr1_-_172145380_172145502	0.962413	CUX2.p2	Y10725|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr9_-_105372402_105372478	0.849235	CUX2.p2	AK209035|Atp2c1|235574|ATPase, Ca++-sequestering	AK173154|Atp2c1|235574|ATPase, Ca++-sequestering	AJ551270|Atp2c1|235574|ATPase, Ca++-sequestering
mm9_v1_chr4_-_129301106_129301154	0.766441	CUX2.p2	AK003287|Ccdc28b|66264|coiled coil domain containing 28B	AK028262|Ccdc28b|66264|coiled coil domain containing 28B	BC028873|Ccdc28b|66264|coiled coil domain containing 28B	NM_025455|Ccdc28b|66264|coiled coil domain containing 28B	AK158016|Ccdc28b|66264|coiled coil domain containing 28B
mm9_v1_chr14_-_52948344_52948436	0.743076	CUX2.p2	NM_015772|Sall2|50524|sal-like 2 (Drosophila)	AJ007396|Sall2|50524|sal-like 2 (Drosophila)
mm9_v1_chr17_+_3482314_3482460	0.695886	CUX2.p2	AK158489|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr1_+_173144116_173144124	0.648221	CUX2.p2	AK149430|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr1_+_173144098_173144105	0.578588	CUX2.p2	AK133515|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	NM_009803|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr11_+_117623703_117623821	0.538455	CUX2.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr4_-_104548965_104549005	0.480921	CUX2.p2	AB077296|C8a|230558|complement component 8, alpha polypeptide	AB077297|C8a|230558|complement component 8, alpha polypeptide	AB077298|C8a|230558|complement component 8, alpha polypeptide	BC027748|C8a|230558|complement component 8, alpha polypeptide	AK090245|C8a|230558|complement component 8, alpha polypeptide	AB077295|C8a|230558|complement component 8, alpha polypeptide	NM_146148|C8a|230558|complement component 8, alpha polypeptide
mm9_v1_chr1_+_173144142_173144169	0.479799	CUX2.p2	AK149381|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	BC089541|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	AF009327|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr3_-_15426426_15426426	0.462245	CUX2.p2	AB112022|Sirpb1a|320832|signal-regulatory protein beta 1A	NM_001002898|Sirpb1a|320832|signal-regulatory protein beta 1A
mm9_v1_chr9_+_85739048_85739158	0.460369	CUX2.p2	AK050794|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr6_+_41304103_41304177	0.422389	CUX2.p2	BC138698|Try10|436522|trypsin 10	BC146017|Try10|436522|trypsin 10	NM_001038996|Try10|436522|trypsin 10	AK133516|Try10|436522|trypsin 10
mm9_v1_chr17_+_8428907_8428907	0.411945	CUX2.p2	NM_001190333|Ccr6|12458|chemokine (C-C motif) receptor 6
mm9_v1_chr3_+_106904470_106904486	0.343584	CUX2.p2	AK044342|Kcna2|16490|potassium voltage-gated channel, shaker-related subfamily, member 2	NM_008417|Kcna2|16490|potassium voltage-gated channel, shaker-related subfamily, member 2
mm9_v1_chr3_+_51299153_51299205	0.313031	CUX2.p2	
mm9_v1_chr3_-_103545641_103545788	0.263525	CUX2.p2	AK159746|Hipk1|15257|homeodomain interacting protein kinase 1	AK076611|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr18_+_53405363_53405427	0.25247	CUX2.p2	AK012711|Snx24|69226|sorting nexing 24	AK017610|Snx24|69226|sorting nexing 24
mm9_v1_chr12_+_75398460_75398460	0.157139	CUX2.p2	NM_198866|Dbpht2|386753|DNA binding protein with his-thr domain
mm9_v1_chr3_-_15748418_15748511	0.0759933	CUX2.p2	AK036935|Sirpb1a|320832|signal-regulatory protein beta 1A	DQ055453|LOC100038947|100038947|signal-regulatory protein beta 1-like	NM_001173459|LOC100038947|100038947|signal-regulatory protein beta 1-like	AB112023|Sirpb1a|320832|signal-regulatory protein beta 1A	AK170671|Sirpb1a|320832|signal-regulatory protein beta 1A	AK054545|Sirpb1a|320832|signal-regulatory protein beta 1A	BC145417|Sirpb1a|320832|signal-regulatory protein beta 1A	BC145418|Sirpb1a|320832|signal-regulatory protein beta 1A	AB112024|Sirpb1a|320832|signal-regulatory protein beta 1A	AK040982|Sirpb1a|320832|signal-regulatory protein beta 1A	AK155731|Sirpb1a|320832|signal-regulatory protein beta 1A	AK041165|Sirpb1a|320832|signal-regulatory protein beta 1A	AB109404|Sirpb1a|320832|signal-regulatory protein beta 1A
mm9_v1_chr2_-_91516101_91516113	0.07296	CUX2.p2	BC024457|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr3_+_19857375_19857397	0.0589373	CUX2.p2	AK033842|Cp|12870|ceruloplasmin
mm9_v1_chr14_-_31756446_31756482	0.0465772	CUX2.p2	BC013465|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	X70391|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	BC028814|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	AK149500|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	NM_008406|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1
mm9_v1_chr11_+_106650565_106650638	0.0319569	CUX2.p2	NM_001166685|Ccdc45|320162|coiled-coil domain containing 45	NM_177088|Ccdc45|320162|coiled-coil domain containing 45	AK076400|Ccdc45|320162|coiled-coil domain containing 45	AK165351|Ccdc45|320162|coiled-coil domain containing 45	BC116308|Ccdc45|320162|coiled-coil domain containing 45	BC116309|Ccdc45|320162|coiled-coil domain containing 45	BC090675|Ccdc45|320162|coiled-coil domain containing 45	AK052705|Ccdc45|320162|coiled-coil domain containing 45
mm9_v1_chr3_+_51299646_51299685	0.0292009	CUX2.p2	
mm9_v1_chr11_-_120486280_120486339	0.00847139	CUX2.p2	BC026403|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC040759|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026637|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026650|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AY251540|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK051725|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK135484|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	NM_153056|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)
mm9_v1_chr1_-_64167574_64167617	0.000667401	CUX2.p2	AB221646|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
