mm9_v1_chr3_-_113061599_113061616	39.2062	FOXA2.p3	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5
mm9_v1_chr3_-_113094211_113094366	35.12	FOXA2.p3	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr3_-_113126814_113126969	30.7375	FOXA2.p3	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr7_+_138175581_138175593	30.0592	FOXA2.p3	BC049835|Dmbt1|12945|deleted in malignant brain tumors 1	NM_007769|Dmbt1|12945|deleted in malignant brain tumors 1	U37438|Dmbt1|12945|deleted in malignant brain tumors 1	AB005909|Dmbt1|12945|deleted in malignant brain tumors 1
mm9_v1_chr14_-_118450875_118451546	26.9646	FOXA2.p3	EU554632|Dct|13190|dopachrome tautomerase	AK214181|Dct|13190|dopachrome tautomerase	AK214448|Dct|13190|dopachrome tautomerase	AK217087|Dct|13190|dopachrome tautomerase	AK212164|Dct|13190|dopachrome tautomerase	AK219002|Dct|13190|dopachrome tautomerase	BC082330|Dct|13190|dopachrome tautomerase	AK209892|Dct|13190|dopachrome tautomerase	AK191654|Dct|13190|dopachrome tautomerase	BC067064|Dct|13190|dopachrome tautomerase	X63349|Dct|13190|dopachrome tautomerase	AK033040|Dct|13190|dopachrome tautomerase	NM_010024|Dct|13190|dopachrome tautomerase	AK202452|Dct|13190|dopachrome tautomerase
mm9_v1_chr12_-_58646914_58647013	22.4643	FOXA2.p3	X74936|Foxa1|15375|forkhead box A1	U44752|Foxa1|15375|forkhead box A1
mm9_v1_chr4_+_104438905_104438999	20.993	FOXA2.p3	AK050313|C8b|110382|complement component 8, beta polypeptide	NM_133882|C8b|110382|complement component 8, beta polypeptide	BC096382|C8b|110382|complement component 8, beta polypeptide	AB077304|C8b|110382|complement component 8, beta polypeptide	AB077305|C8b|110382|complement component 8, beta polypeptide	AB077306|C8b|110382|complement component 8, beta polypeptide
mm9_v1_chr10_-_24647243_24647289	20.8825	FOXA2.p3	BC013341|Arg1|11846|arginase, liver	AK149471|Arg1|11846|arginase, liver	NM_007482|Arg1|11846|arginase, liver	BC050005|Arg1|11846|arginase, liver
mm9_v1_chr3_-_113159420_113159575	18.7041	FOXA2.p3	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr15_+_74545268_74545281	17.9913	FOXA2.p3	AK008851|Psca|72373|prostate stem cell antigen	BC110462|Psca|72373|prostate stem cell antigen	NM_028216|Psca|72373|prostate stem cell antigen	AF319173|Psca|72373|prostate stem cell antigen
mm9_v1_chr19_-_9162377_9162448	17.5269	FOXA2.p3	BC027518|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	AK145844|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	NM_011681|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)
mm9_v1_chr16_-_88563421_88563427	17.5088	FOXA2.p3	AK133810|Cldn8|54420|claudin 8	NM_018778|Cldn8|54420|claudin 8
mm9_v1_chr14_+_103912557_103912637	17.3097	FOXA2.p3	NM_022886|Scel|64929|sciellin	AF245700|Scel|64929|sciellin	BC025142|Scel|64929|sciellin	BC112380|Scel|64929|sciellin	AK020346|Scel|64929|sciellin	BC111874|Scel|64929|sciellin
mm9_v1_chr8_+_120225803_120225850	17.2054	FOXA2.p3	Y09517|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	AK004950|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	NM_008290|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2
mm9_v1_chr5_-_87335956_87335985	17.1899	FOXA2.p3	BC028826|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	NM_153598|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	AK145951|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34
mm9_v1_chr6_+_87323350_87323369	16.7926	FOXA2.p3	AY943909|Gkn2|66284|gastrokine 2	AK007451|Gkn2|66284|gastrokine 2	AK007705|Gkn2|66284|gastrokine 2	AK008692|Gkn2|66284|gastrokine 2	AK008986|Gkn2|66284|gastrokine 2	NM_025467|Gkn2|66284|gastrokine 2	BC099445|Gkn2|66284|gastrokine 2
mm9_v1_chr17_-_31281184_31281204	16.4164	FOXA2.p3	BC050086|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	X51697|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	BC087889|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)
mm9_v1_chr4_-_55545337_55545348	16.3284	FOXA2.p3	U70662|Klf4|16600|Kruppel-like factor 4 (gut)	AK144942|Klf4|16600|Kruppel-like factor 4 (gut)	AK155343|Klf4|16600|Kruppel-like factor 4 (gut)	NM_010637|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr6_+_86578550_86578720	16.1899	FOXA2.p3	BC119099|Asprv1|67855|aspartic peptidase, retroviral-like 1	BC119101|Asprv1|67855|aspartic peptidase, retroviral-like 1	AK004007|Asprv1|67855|aspartic peptidase, retroviral-like 1
mm9_v1_chr11_+_96790581_96790782	16.1372	FOXA2.p3	AK090284|Prr15l|217138|proline rich 15-like	BC034213|Prr15l|217138|proline rich 15-like	AK077279|Prr15l|217138|proline rich 15-like	BC022765|Prr15l|217138|proline rich 15-like	NM_146026|Prr15l|217138|proline rich 15-like	BC036171|Prr15l|217138|proline rich 15-like	BC034192|Prr15l|217138|proline rich 15-like	BC024510|Prr15l|217138|proline rich 15-like	AK087566|Prr15l|217138|proline rich 15-like
mm9_v1_chr16_-_88563379_88563403	15.9902	FOXA2.p3	BC003868|Cldn8|54420|claudin 8
mm9_v1_chr4_-_55545211_55545278	15.8071	FOXA2.p3	BC010301|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr17_-_31281223_31281229	15.5508	FOXA2.p3	AK003093|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)	NM_009363|Tff2|21785|trefoil factor 2 (spasmolytic protein 1)
mm9_v1_chr11_+_28821585_28821724	15.448	FOXA2.p3	AK162532|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr5_-_88956788_88956921	15.2872	FOXA2.p3	J00544|Igj|16069|immunoglobulin joining chain	AK078865|Igj|16069|immunoglobulin joining chain	M90766|Igj|16069|immunoglobulin joining chain	BC006026|Igj|16069|immunoglobulin joining chain	AK160344|Igj|16069|immunoglobulin joining chain	NM_152839|Igj|16069|immunoglobulin joining chain
mm9_v1_chr4_-_57929087_57929168	14.9559	FOXA2.p3	BC030929|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK085537|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	BC095953|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	NM_178727|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK035369|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene
mm9_v1_chr3_-_112959644_112959644	14.6233	FOXA2.p3	NM_001190403|Amy2b|545562|amylase 2b	NM_001190404|Amy2b|545562|amylase 2b
mm9_v1_chr6_+_86578269_86578294	14.4857	FOXA2.p3	BC108357|Asprv1|67855|aspartic peptidase, retroviral-like 1
mm9_v1_chr15_-_5058532_5058532	14.2757	FOXA2.p3	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr5_-_66472208_66472234	14.1819	FOXA2.p3	BC034195|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr18_+_20823908_20823925	13.7335	FOXA2.p3	AK018701|Ttr|22139|transthyretin	AK014454|Ttr|22139|transthyretin	AK075588|Ttr|22139|transthyretin	BC086926|Ttr|22139|transthyretin	D89076|Ttr|22139|transthyretin	X03351|Ttr|22139|transthyretin	AK050155|Ttr|22139|transthyretin	BC032069|Ttr|22139|transthyretin
mm9_v1_chr8_-_46380114_46380132	13.7036	FOXA2.p3	BC026555|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr8_-_46380165_46380188	13.5913	FOXA2.p3	NM_008455|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr1_+_89999782_89999852	13.5663	FOXA2.p3	NM_201410|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B	BC026561|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B
mm9_v1_chr6_+_70676428_70676433	13.3575	FOXA2.p3	
mm9_v1_chr9_-_99617685_99617685	13.3351	FOXA2.p3	AF349451|Cldn18|56492|claudin 18	AF349453|Cldn18|56492|claudin 18	AK033657|Cldn18|56492|claudin 18	NM_001194921|Cldn18|56492|claudin 18	NM_001194923|Cldn18|56492|claudin 18
mm9_v1_chr8_+_120225866_120225892	13.2672	FOXA2.p3	BC012682|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	X95685|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2
mm9_v1_chr1_+_159456274_159456300	13.047	FOXA2.p3	AK132144|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	AB063356|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	NM_001159986|Sec16b|89867|SEC16 homolog B (S. cerevisiae)
mm9_v1_chr9_-_99610427_99610465	12.9206	FOXA2.p3	AF349450|Cldn18|56492|claudin 18	AF221068|Cldn18|56492|claudin 18
mm9_v1_chr17_-_12868558_12868577	12.8584	FOXA2.p3	U38652|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1	AF010259|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1
mm9_v1_chr18_+_70085202_70085238	12.7198	FOXA2.p3	AK078964|Ccdc68|381175|coiled-coil domain containing 68	NM_201362|Ccdc68|381175|coiled-coil domain containing 68	BC046343|Ccdc68|381175|coiled-coil domain containing 68
mm9_v1_chrX_-_35772763_35772868	12.6388	FOXA2.p3	
mm9_v1_chr12_+_113917038_113917088	12.6069	FOXA2.p3	BC046387|Zbtb42|382639|zinc finger and BTB domain containing 42	NM_001100460|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr17_-_12868607_12868703	12.5084	FOXA2.p3	BC021651|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1	NM_009202|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1
mm9_v1_chr9_-_99610481_99610525	11.9625	FOXA2.p3	NM_001194922|Cldn18|56492|claudin 18	NM_019815|Cldn18|56492|claudin 18
mm9_v1_chr10_-_20880559_20880789	11.891	FOXA2.p3	X02774|Myb|17863|myeloblastosis oncogene	AK132250|Myb|17863|myeloblastosis oncogene	AK137965|Myb|17863|myeloblastosis oncogene	BC011513|Myb|17863|myeloblastosis oncogene	AK088079|Myb|17863|myeloblastosis oncogene	AK088598|Myb|17863|myeloblastosis oncogene	M12848|Myb|17863|myeloblastosis oncogene	NM_001198914|Myb|17863|myeloblastosis oncogene	NM_010848|Myb|17863|myeloblastosis oncogene
mm9_v1_chr12_-_82068951_82069043	11.5921	FOXA2.p3	U95131|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	U95132|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	AB003303|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	BC021154|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm9_v1_chr6_+_86578225_86578230	11.5795	FOXA2.p3	AK160494|Asprv1|67855|aspartic peptidase, retroviral-like 1
mm9_v1_chr4_-_57928618_57928638	11.4533	FOXA2.p3	AK033446|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene
mm9_v1_chr14_-_49282546_49282546	11.3479	FOXA2.p3	BC017609|Otx2|18424|orthodenticle homolog 2 (Drosophila)	NM_144841|Otx2|18424|orthodenticle homolog 2 (Drosophila)
mm9_v1_chr1_+_133558507_133558510	11.3268	FOXA2.p3	AK143581|Ctse|13034|cathepsin E
mm9_v1_chr16_+_35002066_35002125	11.2998	FOXA2.p3	BC062265|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr1_+_133558486_133558487	11.2435	FOXA2.p3	AK157907|Ctse|13034|cathepsin E	AK165242|Ctse|13034|cathepsin E
mm9_v1_chr5_-_17394564_17394590	11.2029	FOXA2.p3	AK128908|Cd36|12491|CD36 antigen
mm9_v1_chr8_-_112102946_112102953	10.9558	FOXA2.p3	BC138872|Hp|15439|haptoglobin	M96827|Hp|15439|haptoglobin
mm9_v1_chr3_+_116564564_116564609	10.8634	FOXA2.p3	NM_009146|Frrs1|20321|ferric-chelate reductase 1	AK075573|Frrs1|20321|ferric-chelate reductase 1	AK144933|Frrs1|20321|ferric-chelate reductase 1	AK162693|Frrs1|20321|ferric-chelate reductase 1	D50464|Frrs1|20321|ferric-chelate reductase 1
mm9_v1_chr6_+_113408477_113408477	10.8473	FOXA2.p3	AK046302|Il17re|57890|interleukin 17 receptor E	NM_145826|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr16_+_48872720_48872733	10.8182	FOXA2.p3	NM_181596|Retnlg|245195|resistin like gamma
mm9_v1_chr8_-_64601861_64601991	10.7246	FOXA2.p3	BC125319|Anxa10|26359|annexin A10	BC132207|Anxa10|26359|annexin A10	AJ238978|Anxa10|26359|annexin A10	AK168715|Anxa10|26359|annexin A10	NM_001136089|Anxa10|26359|annexin A10	AK131880|Anxa10|26359|annexin A10	AK008772|Anxa10|26359|annexin A10	AK008808|Anxa10|26359|annexin A10	AK020288|Anxa10|26359|annexin A10	NM_011922|Anxa10|26359|annexin A10	AK018597|Anxa10|26359|annexin A10	AK008930|Anxa10|26359|annexin A10
mm9_v1_chr3_-_154718282_154718370	10.6856	FOXA2.p3	AK052882|Tnni3k|435766|TNNI3 interacting kinase	BC139368|Tnni3k|435766|TNNI3 interacting kinase	BC139394|Tnni3k|435766|TNNI3 interacting kinase	AK084817|Tnni3k|435766|TNNI3 interacting kinase	AY526095|Tnni3k|435766|TNNI3 interacting kinase	AY526096|Tnni3k|435766|TNNI3 interacting kinase	NM_177066|Tnni3k|435766|TNNI3 interacting kinase
mm9_v1_chr10_+_115254308_115254566	10.4841	FOXA2.p3	AK087696|Tspan8|216350|tetraspanin 8	AK077301|Tspan8|216350|tetraspanin 8	BC027777|Tspan8|216350|tetraspanin 8	BC029808|Tspan8|216350|tetraspanin 8	NM_001168679|Tspan8|216350|tetraspanin 8	NM_001168680|Tspan8|216350|tetraspanin 8	NM_146010|Tspan8|216350|tetraspanin 8	BC029068|Tspan8|216350|tetraspanin 8	BC025461|Tspan8|216350|tetraspanin 8	BC034198|Tspan8|216350|tetraspanin 8
mm9_v1_chr6_+_70676803_70676846	10.4729	FOXA2.p3	
mm9_v1_chr19_+_7131270_7131299	10.4701	FOXA2.p3	AK052998|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr12_-_82069060_82069069	10.3251	FOXA2.p3	NM_001177561|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1	NM_011387|Slc10a1|20493|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm9_v1_chr14_+_73637961_73638071	10.3052	FOXA2.p3	BC145940|Lpar6|67168|lysophosphatidic acid receptor 6	BC145942|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr1_+_133558517_133558572	10.2877	FOXA2.p3	X97399|Ctse|13034|cathepsin E	AK165271|Ctse|13034|cathepsin E	CT010252|Ctse|13034|cathepsin E
mm9_v1_chr6_+_97941776_97941914	10.2276	FOXA2.p3	NM_008601|Mitf|17342|microphthalmia-associated transcription factor	U19875|Mitf|17342|microphthalmia-associated transcription factor	Z23066|Mitf|17342|microphthalmia-associated transcription factor	BC108976|Mitf|17342|microphthalmia-associated transcription factor	BC108977|Mitf|17342|microphthalmia-associated transcription factor	AB221657|Mitf|17342|microphthalmia-associated transcription factor
mm9_v1_chr3_+_105916283_105916305	10.2253	FOXA2.p3	AK007573|Chia|81600|chitinase, acidic	AK008633|Chia|81600|chitinase, acidic	AK008650|Chia|81600|chitinase, acidic	AK008757|Chia|81600|chitinase, acidic	AK160173|Chia|81600|chitinase, acidic	BC034548|Chia|81600|chitinase, acidic	NM_023186|Chia|81600|chitinase, acidic	AF290003|Chia|81600|chitinase, acidic	DQ349202|Chia|81600|chitinase, acidic	EF094027|Chia|81600|chitinase, acidic	BC011134|Chia|81600|chitinase, acidic	AF154571|Chia|81600|chitinase, acidic
mm9_v1_chr11_+_117675276_117675380	10.0558	FOXA2.p3	AK180145|Syngr2|20973|synaptogyrin 2
mm9_v1_chr6_+_86578167_86578196	9.99533	FOXA2.p3	DQ841260|Asprv1|67855|aspartic peptidase, retroviral-like 1	NM_026414|Asprv1|67855|aspartic peptidase, retroviral-like 1	BC057938|Asprv1|67855|aspartic peptidase, retroviral-like 1
mm9_v1_chr8_-_112102961_112102972	9.96276	FOXA2.p3	AK159676|Hp|15439|haptoglobin	S67972|Hp|15439|haptoglobin	AK150430|Hp|15439|haptoglobin	AK150830|Hp|15439|haptoglobin	AK152295|Hp|15439|haptoglobin	AK152698|Hp|15439|haptoglobin
mm9_v1_chr19_+_7131325_7131532	9.95303	FOXA2.p3	BC008653|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr6_-_83606025_83606093	9.92916	FOXA2.p3	D88577|Clec4f|51811|C-type lectin domain family 4, member f	BC013647|Clec4f|51811|C-type lectin domain family 4, member f
mm9_v1_chr18_+_20823750_20823857	9.87239	FOXA2.p3	NM_013697|Ttr|22139|transthyretin	BC024702|Ttr|22139|transthyretin
mm9_v1_chr14_-_31756446_31756482	9.8059	FOXA2.p3	BC013465|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	X70391|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	BC028814|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	AK149500|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	NM_008406|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1
mm9_v1_chr12_+_7984451_7984482	9.79296	FOXA2.p3	BC100607|Apob|238055|apolipoprotein B	BC028880|Apob|238055|apolipoprotein B	BC038263|Apob|238055|apolipoprotein B	NM_009693|Apob|238055|apolipoprotein B
mm9_v1_chr1_+_90097175_90097211	9.73301	FOXA2.p3	AY227195|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	AK002629|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	NM_013701|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	BC138676|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	BC145969|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2	D87866|Ugt1a2|22236|UDP glucuronosyltransferase 1 family, polypeptide A2
mm9_v1_chr7_-_112748585_112748623	9.70841	FOXA2.p3	U89889|Hpx|15458|hemopexin	BC011246|Hpx|15458|hemopexin	BC019901|Hpx|15458|hemopexin
mm9_v1_chr1_+_132628552_132628703	9.59817	FOXA2.p3	AK053179|AA986860|212439|expressed sequence AA986860	NM_177604|AA986860|212439|expressed sequence AA986860	AK028957|AA986860|212439|expressed sequence AA986860	AK086121|AA986860|212439|expressed sequence AA986860
mm9_v1_chr6_-_83606100_83606109	9.55929	FOXA2.p3	AK040696|Clec4f|51811|C-type lectin domain family 4, member f	NM_016751|Clec4f|51811|C-type lectin domain family 4, member f
mm9_v1_chr7_-_112748624_112748633	9.50745	FOXA2.p3	AK145928|Hpx|15458|hemopexin	NM_017371|Hpx|15458|hemopexin
mm9_v1_chr4_-_106979732_106979773	9.49693	FOXA2.p3	AK002549|Dio1|13370|deiodinase, iodothyronine, type I	BC089608|Dio1|13370|deiodinase, iodothyronine, type I	NM_007860|Dio1|13370|deiodinase, iodothyronine, type I	U49861|Dio1|13370|deiodinase, iodothyronine, type I	BC019786|Dio1|13370|deiodinase, iodothyronine, type I	BC037080|Dio1|13370|deiodinase, iodothyronine, type I
mm9_v1_chr14_+_73637697_73637874	9.49036	FOXA2.p3	NM_175116|Lpar6|67168|lysophosphatidic acid receptor 6	AK032901|Lpar6|67168|lysophosphatidic acid receptor 6	AK011967|Lpar6|67168|lysophosphatidic acid receptor 6	AK169602|Lpar6|67168|lysophosphatidic acid receptor 6	BC047931|Lpar6|67168|lysophosphatidic acid receptor 6	AK008952|Lpar6|67168|lysophosphatidic acid receptor 6	BC057175|Lpar6|67168|lysophosphatidic acid receptor 6	BC069991|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr16_+_30065419_30065442	9.46304	FOXA2.p3	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr12_+_120681882_120681882	9.44612	FOXA2.p3	NM_001163136|Macc1|238455|metastasis associated in colon cancer 1
mm9_v1_chr3_+_94736993_94737043	9.43249	FOXA2.p3	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr14_-_41998434_41998486	9.39604	FOXA2.p3	BC012896|Sftpd|20390|surfactant associated protein D	BC003705|Sftpd|20390|surfactant associated protein D	NM_009160|Sftpd|20390|surfactant associated protein D
mm9_v1_chr7_+_126904427_126904559	9.3653	FOXA2.p3	NM_016870|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	NM_212441|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	NM_212442|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK143946|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AF068246|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AY064696|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK041060|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK165516|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AK077247|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	BC015248|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3	AB022340|Acsm3|20216|acyl-CoA synthetase medium-chain family member 3
mm9_v1_chr6_+_15750966_15750972	9.33956	FOXA2.p3	AK087298|Mdfic|16543|MyoD family inhibitor domain containing	U13371|Mdfic|16543|MyoD family inhibitor domain containing
mm9_v1_chr9_+_46076832_46076883	9.29029	FOXA2.p3	BC011198|Apoa5|66113|apolipoprotein A-V
mm9_v1_chr6_-_87338847_87338928	9.28118	FOXA2.p3	AK004474|Gkn3|68888|gastrokine 3	FN600638|Gkn3|68888|gastrokine 3	GU220566|Gkn3|68888|gastrokine 3	BC116955|Gkn3|68888|gastrokine 3	NM_026860|Gkn3|68888|gastrokine 3
mm9_v1_chr3_+_94736974_94736989	9.14099	FOXA2.p3	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr11_+_58028487_58028540	9.13214	FOXA2.p3	AK152870|Irgm2|54396|immunity-related GTPase family M member 2	AK153309|Irgm2|54396|immunity-related GTPase family M member 2	AK165347|Irgm2|54396|immunity-related GTPase family M member 2
mm9_v1_chr11_+_61022240_61022343	9.05239	FOXA2.p3	AK144241|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	NM_001112725|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	NM_007436|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	U12785|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	AF072815|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	BC144946|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1	BC150677|Aldh3a1|11670|aldehyde dehydrogenase family 3, subfamily A1
mm9_v1_chr19_+_58803376_58803466	9.02726	FOXA2.p3	AF061274|Pnliprp1|18946|pancreatic lipase related protein 1	NM_018874|Pnliprp1|18946|pancreatic lipase related protein 1	AK028105|Pnliprp1|18946|pancreatic lipase related protein 1	BC090985|Pnliprp1|18946|pancreatic lipase related protein 1
mm9_v1_chr7_-_29678773_29678890	8.95973	FOXA2.p3	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr3_+_94497485_94497530	8.90461	FOXA2.p3	NM_019414|Selenbp2|20342|selenium binding protein 2	S56599|Selenbp2|20342|selenium binding protein 2	BC024106|Selenbp2|20342|selenium binding protein 2
mm9_v1_chr5_+_116005777_116005859	8.88737	FOXA2.p3	AK194144|Pxn|19303|paxillin	AK205143|Pxn|19303|paxillin	AK219507|Pxn|19303|paxillin
mm9_v1_chr14_+_79601537_79601578	8.87773	FOXA2.p3	
mm9_v1_chr15_+_6529846_6529910	8.72219	FOXA2.p3	AK037454|Fyb|23880|FYN binding protein	AK038225|Fyb|23880|FYN binding protein	NM_011815|Fyb|23880|FYN binding protein	AF001863|Fyb|23880|FYN binding protein	AF061744|Fyb|23880|FYN binding protein	AK030905|Fyb|23880|FYN binding protein	AK172013|Fyb|23880|FYN binding protein	AK137907|Fyb|23880|FYN binding protein	BC141352|Fyb|23880|FYN binding protein	BC064102|Fyb|23880|FYN binding protein
mm9_v1_chr12_+_77471506_77471590	8.6125	FOXA2.p3	AK029762|Zbtb1|268564|zinc finger and BTB domain containing 1	AK131985|Zbtb1|268564|zinc finger and BTB domain containing 1	BC012239|Zbtb1|268564|zinc finger and BTB domain containing 1
mm9_v1_chr10_+_127705664_127705801	8.60021	FOXA2.p3	BC022795|Apof|103161|apolipoprotein F	BC024769|Apof|103161|apolipoprotein F	BC025827|Apof|103161|apolipoprotein F	BC010815|Apof|103161|apolipoprotein F
mm9_v1_chr16_+_17331463_17331501	8.59345	FOXA2.p3	NM_008223|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr10_+_127335573_127335617	8.55564	FOXA2.p3	AK037184|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	BC064820|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	NM_027301|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	AY044433|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7
mm9_v1_chr3_-_95708543_95708565	8.45969	FOXA2.p3	BC046995|Car14|23831|carbonic anhydrase 14	AK157764|Car14|23831|carbonic anhydrase 14	AB005450|Car14|23831|carbonic anhydrase 14	NM_011797|Car14|23831|carbonic anhydrase 14
mm9_v1_chr16_+_17331507_17331521	8.37463	FOXA2.p3	BC089610|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr5_-_17355533_17355611	8.35172	FOXA2.p3	AK172162|Cd36|12491|CD36 antigen	BC010262|Cd36|12491|CD36 antigen	AK150648|Cd36|12491|CD36 antigen	NM_001159556|Cd36|12491|CD36 antigen	NM_001159557|Cd36|12491|CD36 antigen
mm9_v1_chr7_+_147949637_147949642	8.26528	FOXA2.p3	L11650|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1
mm9_v1_chr19_-_20802015_20802054	8.23719	FOXA2.p3	BC046315|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC032880|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139412|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139413|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	NM_011921|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	U96401|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7
mm9_v1_chr13_-_38069696_38069810	8.19479	FOXA2.p3	
mm9_v1_chr17_+_34766489_34766633	8.19437	FOXA2.p3	BC128489|Prrt1|260297|proline-rich transmembrane protein 1	NM_030890|Prrt1|260297|proline-rich transmembrane protein 1	BC115512|Prrt1|260297|proline-rich transmembrane protein 1	BC115513|Prrt1|260297|proline-rich transmembrane protein 1
mm9_v1_chr10_-_60915251_60915468	8.18145	FOXA2.p3	AK133912|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	BC119539|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	NM_010124|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	U75530|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr1_-_135972341_135972341	8.15471	FOXA2.p3	
mm9_v1_chr3_-_105970438_105970481	8.00787	FOXA2.p3	D87757|Chi3l3|12655|chitinase 3-like 3	M94584|Chi3l3|12655|chitinase 3-like 3	AK154420|Chi3l3|12655|chitinase 3-like 3	BC061154|Chi3l3|12655|chitinase 3-like 3	AK137503|Chi3l3|12655|chitinase 3-like 3	NM_009892|Chi3l3|12655|chitinase 3-like 3
mm9_v1_chr6_+_124254668_124254724	7.90579	FOXA2.p3	NM_001170395|Cd163|93671|CD163 antigen	NM_053094|Cd163|93671|CD163 antigen	AF274883|Cd163|93671|CD163 antigen	BC144848|Cd163|93671|CD163 antigen	BC145793|Cd163|93671|CD163 antigen	DQ058616|Cd163|93671|CD163 antigen	DQ058617|Cd163|93671|CD163 antigen
mm9_v1_chr6_+_90424727_90424917	7.8959	FOXA2.p3	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr6_-_87793459_87793650	7.86019	FOXA2.p3	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr19_+_55816299_55816310	7.8342	FOXA2.p3	NM_001142918|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142919|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142920|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142921|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142922|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142923|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_009333|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	BC011397|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr11_+_110260435_110260577	7.79308	FOXA2.p3	AK043482|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK086722|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK138757|Map2k6|26399|mitogen-activated protein kinase kinase 6	NM_011943|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK077712|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK140289|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK141708|Map2k6|26399|mitogen-activated protein kinase kinase 6	BC075652|Map2k6|26399|mitogen-activated protein kinase kinase 6	AK162671|Map2k6|26399|mitogen-activated protein kinase kinase 6	X97052|Map2k6|26399|mitogen-activated protein kinase kinase 6
mm9_v1_chr3_+_106288967_106288967	7.78967	FOXA2.p3	BC008266|Dennd2d|72121|DENN/MADD domain containing 2D	NM_028110|Dennd2d|72121|DENN/MADD domain containing 2D
mm9_v1_chr6_-_3444484_3444497	7.77845	FOXA2.p3	BC096374|Hepacam2|101202|HEPACAM family member 2	AK033728|Hepacam2|101202|HEPACAM family member 2	AK050501|Hepacam2|101202|HEPACAM family member 2	NM_178899|Hepacam2|101202|HEPACAM family member 2
mm9_v1_chr10_+_23571267_23571295	7.77263	FOXA2.p3	NM_011979|Vnn3|26464|vanin 3	AJ132103|Vnn3|26464|vanin 3	BC111521|Vnn3|26464|vanin 3
mm9_v1_chr9_+_53109774_53109787	7.77078	FOXA2.p3	AB098163|Exph5|320051|exophilin 5	NM_176846|Exph5|320051|exophilin 5	BC120905|Exph5|320051|exophilin 5
mm9_v1_chr6_-_5143755_5143945	7.76574	FOXA2.p3	BC012706|Pon1|18979|paraoxonase 1	U72636|Pon1|18979|paraoxonase 1	U32684|Pon1|18979|paraoxonase 1	NM_011134|Pon1|18979|paraoxonase 1
mm9_v1_chr3_-_115710131_115710328	7.74608	FOXA2.p3	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr7_-_94641859_94642021	7.5582	FOXA2.p3	M26729|Tyr|22173|tyrosinase	AK148341|Tyr|22173|tyrosinase	BC079678|Tyr|22173|tyrosinase	AK148432|Tyr|22173|tyrosinase	D00440|Tyr|22173|tyrosinase	M24560|Tyr|22173|tyrosinase	NM_011661|Tyr|22173|tyrosinase	D00131|Tyr|22173|tyrosinase	AK148172|Tyr|22173|tyrosinase	AK148357|Tyr|22173|tyrosinase	AK014619|Tyr|22173|tyrosinase	AY526904|Tyr|22173|tyrosinase	X12782|Tyr|22173|tyrosinase	M20234|Tyr|22173|tyrosinase
mm9_v1_chrX_+_157205944_157206093	7.55753	FOXA2.p3	BC046422|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	NM_011302|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF084561|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AF073780|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)	AJ011381|Rs1|20147|retinoschisis (X-linked, juvenile) 1 (human)
mm9_v1_chr1_+_45402907_45402949	7.5314	FOXA2.p3	AK029451|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr12_+_77471173_77471252	7.52803	FOXA2.p3	AK035036|Zbtb1|268564|zinc finger and BTB domain containing 1	AK049397|Zbtb1|268564|zinc finger and BTB domain containing 1	AY611626|Zbtb1|268564|zinc finger and BTB domain containing 1	NM_178744|Zbtb1|268564|zinc finger and BTB domain containing 1
mm9_v1_chr6_+_135312948_135312972	7.41317	FOXA2.p3	BC046299|Emp1|13730|epithelial membrane protein 1	NM_010128|Emp1|13730|epithelial membrane protein 1	X98403|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr9_+_46076689_46076697	7.39567	FOXA2.p3	AF327059|Apoa5|66113|apolipoprotein A-V	NM_080434|Apoa5|66113|apolipoprotein A-V
mm9_v1_chr15_-_102008126_102008145	7.38795	FOXA2.p3	
mm9_v1_chr6_+_87040212_87040221	7.34385	FOXA2.p3	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr16_+_22892112_22892117	7.33821	FOXA2.p3	NM_013465|Ahsg|11625|alpha-2-HS-glycoprotein	AK149474|Ahsg|11625|alpha-2-HS-glycoprotein	AK149479|Ahsg|11625|alpha-2-HS-glycoprotein	AK167709|Ahsg|11625|alpha-2-HS-glycoprotein	AK133523|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr6_-_134741351_134741353	7.32929	FOXA2.p3	AK035652|Dusp16|70686|dual specificity phosphatase 16
mm9_v1_chr1_+_89951985_89952026	7.28385	FOXA2.p3	BC089569|Ugt1a10|394430|UDP glycosyltransferase 1 family, polypeptide A10	NM_201641|Ugt1a10|394430|UDP glycosyltransferase 1 family, polypeptide A10	AY227201|Ugt1a10|394430|UDP glycosyltransferase 1 family, polypeptide A10
mm9_v1_chr11_+_94426358_94426387	7.25536	FOXA2.p3	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chr3_-_131047840_131047850	7.24888	FOXA2.p3	NM_028943|Sgms2|74442|sphingomyelin synthase 2	BC117782|Sgms2|74442|sphingomyelin synthase 2	AK016659|Sgms2|74442|sphingomyelin synthase 2
mm9_v1_chr7_+_109378512_109378530	7.23359	FOXA2.p3	AK152420|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr17_+_34400152_34400289	7.2116	FOXA2.p3	NM_207105|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK077436|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC008168|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK170370|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171211|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK155573|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171281|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK172409|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK156899|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171005|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171290|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171298|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC010322|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC057998|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M15848|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065913|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119251|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119252|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AY452202|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13537|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13538|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13539|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13540|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M66213|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065912|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13541|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1
mm9_v1_chr10_+_127142225_127142311	7.1606	FOXA2.p3	BC147605|Myo1a|432516|myosin IA	BC147612|Myo1a|432516|myosin IA	AF009960|Myo1a|432516|myosin IA	NM_001081219|Myo1a|432516|myosin IA
mm9_v1_chr5_+_65221116_65221144	7.15984	FOXA2.p3	AK036932|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr8_-_112103065_112103072	7.09057	FOXA2.p3	NM_017370|Hp|15439|haptoglobin
mm9_v1_chr6_+_135313010_135313048	7.05022	FOXA2.p3	AK158369|Emp1|13730|epithelial membrane protein 1	AK159752|Emp1|13730|epithelial membrane protein 1	AK171061|Emp1|13730|epithelial membrane protein 1	AK172607|Emp1|13730|epithelial membrane protein 1	AK157366|Emp1|13730|epithelial membrane protein 1	AK171675|Emp1|13730|epithelial membrane protein 1	AK172705|Emp1|13730|epithelial membrane protein 1	BC034257|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr16_+_22892125_22892139	6.97738	FOXA2.p3	BC012678|Ahsg|11625|alpha-2-HS-glycoprotein	S96534|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr15_+_54242324_54242328	6.9204	FOXA2.p3	AB016429|Colec10|239447|collectin sub-family member 10	AK028423|Colec10|239447|collectin sub-family member 10	BC106836|Colec10|239447|collectin sub-family member 10	BC106837|Colec10|239447|collectin sub-family member 10	BC108945|Colec10|239447|collectin sub-family member 10	NM_173422|Colec10|239447|collectin sub-family member 10
mm9_v1_chr3_-_20174589_20174650	6.91187	FOXA2.p3	AK003061|Cpb1|76703|carboxypeptidase B1 (tissue)	BC138759|Cpb1|76703|carboxypeptidase B1 (tissue)	BC138762|Cpb1|76703|carboxypeptidase B1 (tissue)	NM_029706|Cpb1|76703|carboxypeptidase B1 (tissue)
mm9_v1_chrX_-_93488752_93488780	6.85948	FOXA2.p3	BC025105|Vsig4|278180|V-set and immunoglobulin domain containing 4	AK041014|Vsig4|278180|V-set and immunoglobulin domain containing 4	NM_177789|Vsig4|278180|V-set and immunoglobulin domain containing 4
mm9_v1_chr19_-_44103644_44103736	6.81005	FOXA2.p3	BC024068|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC034834|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC022141|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC025819|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC026766|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK050436|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK149451|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001001446|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001167905|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44
mm9_v1_chr1_-_138856866_138857085	6.80327	FOXA2.p3	AB221629|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	BC137845|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	M81385|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_030676|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr10_-_127325668_127325688	6.79976	FOXA2.p3	AB032058|Rdh7|54150|retinol dehydrogenase 7
mm9_v1_chr10_-_88996314_88996370	6.77859	FOXA2.p3	U09417|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_001163504|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4
mm9_v1_chr11_+_87895626_87895848	6.73451	FOXA2.p3	AK079148|Vezf1|22344|vascular endothelial zinc finger 1	AK018086|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr7_+_52976589_52976669	6.7258	FOXA2.p3	AK144522|Fam83e|73813|family with sequence similarity 83, member E	NM_001033170|Fam83e|73813|family with sequence similarity 83, member E	BC139284|Fam83e|73813|family with sequence similarity 83, member E
mm9_v1_chr3_-_144695718_144695741	6.6774	FOXA2.p3	BC028343|Clca3|23844|chloride channel calcium activated 3	AB017156|Clca3|23844|chloride channel calcium activated 3	BC116318|Clca3|23844|chloride channel calcium activated 3	BC116319|Clca3|23844|chloride channel calcium activated 3	AK007466|Clca3|23844|chloride channel calcium activated 3	AK008659|Clca3|23844|chloride channel calcium activated 3	AK136476|Clca3|23844|chloride channel calcium activated 3	AK033560|Clca3|23844|chloride channel calcium activated 3	NM_017474|Clca3|23844|chloride channel calcium activated 3
mm9_v1_chr19_+_7131234_7131258	6.64835	FOXA2.p3	NM_134147|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr16_+_33518414_33518431	6.61776	FOXA2.p3	NM_134251|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8	AF319951|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8
mm9_v1_chr17_-_7997838_7997838	6.5979	FOXA2.p3	NM_001081416|Fndc1|68655|fibronectin type III domain containing 1
mm9_v1_chr10_+_127691272_127691399	6.5881	FOXA2.p3	BC022137|Apon|28194|apolipoprotein N	BC030734|Apon|28194|apolipoprotein N
mm9_v1_chr3_+_19857053_19857266	6.58769	FOXA2.p3	BC062957|Cp|12870|ceruloplasmin	NM_001042611|Cp|12870|ceruloplasmin	NM_007752|Cp|12870|ceruloplasmin	DQ336396|Cp|12870|ceruloplasmin	AK014835|Cp|12870|ceruloplasmin	AK043248|Cp|12870|ceruloplasmin	U49430|Cp|12870|ceruloplasmin	AK149523|Cp|12870|ceruloplasmin
mm9_v1_chr5_-_91069499_91069680	6.56962	FOXA2.p3	AK005472|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	AK132288|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	NM_028478|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6	BC031808|Rassf6|73246|Ras association (RalGDS/AF-6) domain family member 6
mm9_v1_chr16_-_22811458_22811482	6.55898	FOXA2.p3	BC056452|Crygs|12970|crystallin, gamma S	AF032995|Crygs|12970|crystallin, gamma S	AK143060|Crygs|12970|crystallin, gamma S	NM_009967|Crygs|12970|crystallin, gamma S
mm9_v1_chr10_-_24647173_24647229	6.55303	FOXA2.p3	CT010173|Arg1|11846|arginase, liver
mm9_v1_chrX_+_160578411_160578593	6.47945	FOXA2.p3	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr3_+_96636596_96636596	6.43915	FOXA2.p3	NM_001146001|Pdzk1|59020|PDZ domain containing 1
mm9_v1_chr16_+_37580238_37580255	6.43366	FOXA2.p3	NM_013547|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr16_+_33500899_33501016	6.41835	FOXA2.p3	AK037342|Zfp148|22661|zinc finger protein 148
mm9_v1_chr2_+_153834000_153834013	6.41576	FOXA2.p3	AK009032|Psp|19194|parotid secretory protein	AK010181|Psp|19194|parotid secretory protein	AK009654|Psp|19194|parotid secretory protein	BC010288|Psp|19194|parotid secretory protein	BC053336|Psp|19194|parotid secretory protein	NM_008953|Psp|19194|parotid secretory protein	BC037124|Psp|19194|parotid secretory protein
mm9_v1_chr2_-_27118325_27118417	6.41287	FOXA2.p3	AK012893|Vav2|22325|vav 2 oncogene	BC025845|Vav2|22325|vav 2 oncogene
mm9_v1_chrX_-_35793335_35793510	6.38305	FOXA2.p3	AK184164|Lamp2|16784|lysosomal-associated membrane protein 2	AK217258|Lamp2|16784|lysosomal-associated membrane protein 2	AK128946|Lamp2|16784|lysosomal-associated membrane protein 2
mm9_v1_chr19_-_38117813_38117907	6.38001	FOXA2.p3	BC150790|Myof|226101|myoferlin	AK086107|Myof|226101|myoferlin	AK173131|Myof|226101|myoferlin	AK087302|Myof|226101|myoferlin	AK031666|Myof|226101|myoferlin	AK087176|Myof|226101|myoferlin
mm9_v1_chr10_-_117252126_117252166	6.37635	FOXA2.p3	
mm9_v1_chr2_-_60560659_60560699	6.37041	FOXA2.p3	AK036439|Itgb6|16420|integrin beta 6	NM_001159564|Itgb6|16420|integrin beta 6	AK085900|Itgb6|16420|integrin beta 6
mm9_v1_chr2_-_62321694_62321709	6.33076	FOXA2.p3	BC012975|Gcg|14526|glucagon	AK007911|Gcg|14526|glucagon	AK148544|Gcg|14526|glucagon	AF276754|Gcg|14526|glucagon	NM_008100|Gcg|14526|glucagon
mm9_v1_chr16_+_22892156_22892180	6.31395	FOXA2.p3	BC019822|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr3_+_135488454_135488592	6.30716	FOXA2.p3	AK028215|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_026228|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	AK016853|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr5_-_146691425_146691448	6.29577	FOXA2.p3	BC094062|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	X60452|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	BC010528|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	NM_007818|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11	AK149433|Cyp3a11|13112|cytochrome P450, family 3, subfamily a, polypeptide 11
mm9_v1_chr7_+_120909680_120909687	6.25616	FOXA2.p3	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr17_+_12571494_12571524	6.23471	FOXA2.p3	BC057186|Plg|18815|plasminogen	AK132254|Plg|18815|plasminogen	J04766|Plg|18815|plasminogen	AK040840|Plg|18815|plasminogen
mm9_v1_chr3_-_8964045_8964059	6.23189	FOXA2.p3	AY048852|Tpd52|21985|tumor protein D52	NM_001025261|Tpd52|21985|tumor protein D52	NM_001025262|Tpd52|21985|tumor protein D52
mm9_v1_chr4_-_49562319_49562386	6.22652	FOXA2.p3	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr6_+_34659440_34659540	6.22477	FOXA2.p3	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr10_+_42580317_42580598	6.19118	FOXA2.p3	NM_172938|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AF397911|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK034171|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	BC043310|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK047972|Scml4|268297|sex comb on midleg-like 4 (Drosophila)
mm9_v1_chr7_-_77511242_77511282	6.17275	FOXA2.p3	AK012573|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK012322|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr3_-_81779636_81779675	6.17049	FOXA2.p3	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr11_-_31724523_31724546	6.1606	FOXA2.p3	AK085420|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene	AK158233|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene	AK158188|D630024D03Rik|414116|RIKEN cDNA D630024D03 gene
mm9_v1_chr16_+_34995000_34995001	6.15117	FOXA2.p3	BC038902|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr19_+_20676453_20676504	6.10393	FOXA2.p3	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr13_+_4190423_4190467	6.0935	FOXA2.p3	AK008949|Akr1c13|27384|aldo-keto reductase family 1, member C13	NM_013778|Akr1c13|27384|aldo-keto reductase family 1, member C13	BC021937|Akr1c13|27384|aldo-keto reductase family 1, member C13	AK220165|Akr1c13|27384|aldo-keto reductase family 1, member C13	AB027125|Akr1c13|27384|aldo-keto reductase family 1, member C13	AB097219|Akr1c13|27384|aldo-keto reductase family 1, member C13
mm9_v1_chr10_-_78180902_78181043	6.08268	FOXA2.p3	AJ007750|Casp14|12365|caspase 14	BC101959|Casp14|12365|caspase 14	BC101960|Casp14|12365|caspase 14	BC103555|Casp14|12365|caspase 14	BC103556|Casp14|12365|caspase 14	AK081645|Casp14|12365|caspase 14	NM_009809|Casp14|12365|caspase 14
mm9_v1_chr6_+_30491641_30491643	6.05496	FOXA2.p3	NM_001024698|Cpa2|232680|carboxypeptidase A2, pancreatic
mm9_v1_chr1_+_140864297_140864301	6.05121	FOXA2.p3	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr1_-_138130840_138130840	6.04426	FOXA2.p3	BC052416|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	BC053100|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	NM_028872|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene
mm9_v1_chr9_-_44611055_44611072	6.03808	FOXA2.p3	AK149384|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr3_+_138078450_138078473	6.02387	FOXA2.p3	AK132994|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_011996|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	AJ245750|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100729|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100736|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100730|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide
mm9_v1_chr1_+_45390415_45390462	6.02219	FOXA2.p3	BC039923|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr19_-_34329804_34329828	6.00904	FOXA2.p3	X13297|Acta2|11475|actin, alpha 2, smooth muscle, aorta	BC064800|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK017374|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK156331|Acta2|11475|actin, alpha 2, smooth muscle, aorta	NM_007392|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chr17_+_12571455_12571482	5.92859	FOXA2.p3	BC014773|Plg|18815|plasminogen	NM_008877|Plg|18815|plasminogen
mm9_v1_chr12_-_104976324_104976338	5.92504	FOXA2.p3	BC022109|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B	BC025445|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr11_+_3931731_3931881	5.79759	FOXA2.p3	BC026948|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	NM_146013|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	AK028954|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)
mm9_v1_chr6_-_16848352_16848440	5.7671	FOXA2.p3	AK156327|Tcfec|21426|transcription factor EC	AK159579|Tcfec|21426|transcription factor EC	BC052832|Tcfec|21426|transcription factor EC	BC064770|Tcfec|21426|transcription factor EC	AK137141|Tcfec|21426|transcription factor EC	AF077742|Tcfec|21426|transcription factor EC	AK157426|Tcfec|21426|transcription factor EC	NM_031198|Tcfec|21426|transcription factor EC
mm9_v1_chr15_+_4677207_4677220	5.75427	FOXA2.p3	NM_016704|C6|12274|complement component 6	AF184900|C6|12274|complement component 6	AK041057|C6|12274|complement component 6	BC011251|C6|12274|complement component 6
mm9_v1_chr9_-_44611033_44611045	5.7508	FOXA2.p3	BC024432|Ttc36|192653|tetratricopeptide repeat domain 36	NM_138951|Ttc36|192653|tetratricopeptide repeat domain 36	BC021613|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr2_+_24935818_24936028	5.74403	FOXA2.p3	BC031143|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	NM_028093|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AY364442|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AK008590|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8
mm9_v1_chr3_+_146260100_146260160	5.67992	FOXA2.p3	AK050425|Uox|22262|urate oxidase	NM_009474|Uox|22262|urate oxidase	BC019771|Uox|22262|urate oxidase	M27695|Uox|22262|urate oxidase
mm9_v1_chr6_+_14851348_14851478	5.67622	FOXA2.p3	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr11_-_100007218_100007243	5.64972	FOXA2.p3	BC034561|Krt19|16669|keratin 19	M28698|Krt19|16669|keratin 19	AB472075|Krt19|16669|keratin 19	BC085304|Krt19|16669|keratin 19	NM_008471|Krt19|16669|keratin 19
mm9_v1_chr9_-_107571304_107571323	5.60849	FOXA2.p3	BC021324|Slc38a3|76257|solute carrier family 38, member 3
mm9_v1_chr10_+_127691166_127691233	5.60704	FOXA2.p3	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr10_+_127691240_127691249	5.59832	FOXA2.p3	BC034832|Apon|28194|apolipoprotein N
mm9_v1_chr1_-_92866005_92866196	5.58628	FOXA2.p3	BC013170|Rab17|19329|RAB17, member RAS oncogene family	BC051071|Rab17|19329|RAB17, member RAS oncogene family	AK075591|Rab17|19329|RAB17, member RAS oncogene family	NM_008998|Rab17|19329|RAB17, member RAS oncogene family
mm9_v1_chr3_+_135488617_135488753	5.51821	FOXA2.p3	AK085740|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135149|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135150|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr5_+_115373272_115373294	5.5159	FOXA2.p3	AK150863|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AK165578|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr1_+_9838330_9838477	5.49384	FOXA2.p3	AK030314|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_001037759|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166531|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK146561|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031328|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171959|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr7_+_147949708_147949754	5.46477	FOXA2.p3	BC013451|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	NM_021282|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	DQ838976|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	DQ838977|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	X62595|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	BC042693|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1
mm9_v1_chr16_+_33518680_33518680	5.44673	FOXA2.p3	BC030926|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001083902|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8
mm9_v1_chr14_-_69200119_69200151	5.41543	FOXA2.p3	BC046324|Adamdec1|58860|ADAM-like, decysin 1	AJ242912|Adamdec1|58860|ADAM-like, decysin 1	NM_021475|Adamdec1|58860|ADAM-like, decysin 1	AK156586|Adamdec1|58860|ADAM-like, decysin 1	BC026542|Adamdec1|58860|ADAM-like, decysin 1
mm9_v1_chrX_+_93651684_93651766	5.40804	FOXA2.p3	NM_001159627|Heph|15203|hephaestin	NM_181273|Heph|15203|hephaestin	AK081330|Heph|15203|hephaestin	AK129194|Heph|15203|hephaestin	AK032895|Heph|15203|hephaestin	AK086923|Heph|15203|hephaestin
mm9_v1_chr4_-_143571878_143571887	5.40228	FOXA2.p3	AK019465|3930401B19Rik|77570|RIKEN cDNA 3930401B19 gene
mm9_v1_chr17_+_47928985_47929151	5.38654	FOXA2.p3	
mm9_v1_chr6_+_113408650_113408888	5.378	FOXA2.p3	AK169498|Il17re|57890|interleukin 17 receptor E	AK044815|Il17re|57890|interleukin 17 receptor E	BC069861|Il17re|57890|interleukin 17 receptor E	AK046713|Il17re|57890|interleukin 17 receptor E	AF458068|Il17re|57890|interleukin 17 receptor E	DQ092339|Il17re|57890|interleukin 17 receptor E	DQ092340|Il17re|57890|interleukin 17 receptor E	DQ092341|Il17re|57890|interleukin 17 receptor E	NM_001034029|Il17re|57890|interleukin 17 receptor E	NM_001034031|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr15_-_96861590_96861647	5.30335	FOXA2.p3	BC024072|Slc38a4|69354|solute carrier family 38, member 4	BC024123|Slc38a4|69354|solute carrier family 38, member 4	AB055004|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr5_-_121337533_121337629	5.29758	FOXA2.p3	X58077|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	BC018470|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	AF480417|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	NM_011852|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	BC043339|Oas1g|23960|2'-5' oligoadenylate synthetase 1G
mm9_v1_chr3_+_52072251_52072295	5.29599	FOXA2.p3	AK154041|Foxo1|56458|forkhead box O1	NM_019739|Foxo1|56458|forkhead box O1	AJ252157|Foxo1|56458|forkhead box O1
mm9_v1_chr5_-_54098762_54098942	5.29422	FOXA2.p3	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr4_-_118162354_118162375	5.29058	FOXA2.p3	X71425|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X73960|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC057004|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC060182|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK052192|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK161898|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC046452|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr3_+_137880777_137880845	5.27255	FOXA2.p3	AK009588|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AK144795|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	BC047267|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	U20257|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm9_v1_chr14_+_37868015_37868020	5.26667	FOXA2.p3	AK044631|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	NM_146245|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	BC032270|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
mm9_v1_chr17_-_71201055_71201077	5.21857	FOXA2.p3	BC012700|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164075|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr2_+_154026115_154026115	5.16621	FOXA2.p3	NM_153418|U46068|228801|cDNA sequence U46068	U46068|U46068|228801|cDNA sequence U46068
mm9_v1_chr11_+_115196047_115196130	5.16548	FOXA2.p3	NM_027132|Otop3|69602|otopetrin 3	AB087505|Otop3|69602|otopetrin 3	AK043266|Otop3|69602|otopetrin 3	BC145613|Otop3|69602|otopetrin 3	BC150803|Otop3|69602|otopetrin 3
mm9_v1_chr3_+_98084352_98084426	5.12878	FOXA2.p3	NM_008256|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004865|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004902|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK098104|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC014714|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC024744|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
mm9_v1_chr4_-_118162385_118162453	5.12168	FOXA2.p3	AK052413|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK051512|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_011587|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr19_-_34736879_34736908	5.05207	FOXA2.p3	AK090072|Gm14446|667373|predicted gene 14446
mm9_v1_chr6_-_16848314_16848325	5.03931	FOXA2.p3	BC098494|Tcfec|21426|transcription factor EC
mm9_v1_chr4_-_82531027_82531054	4.96581	FOXA2.p3	AF035579|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC145993|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC132431|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	AF031896|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	NM_009887|Cer1|12622|cerberus 1 homolog (Xenopus laevis)
mm9_v1_chr11_-_120587426_120587428	4.93521	FOXA2.p3	
mm9_v1_chr7_-_116760660_116760660	4.92833	FOXA2.p3	NM_001001326|St5|76954|suppression of tumorigenicity 5	NM_029811|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr7_-_97103461_97103540	4.91239	FOXA2.p3	
mm9_v1_chr1_-_39608739_39608803	4.90472	FOXA2.p3	AK020327|Rnf149|67702|ring finger protein 149
mm9_v1_chr5_-_87997908_87998005	4.90351	FOXA2.p3	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr10_-_127325698_127325715	4.90257	FOXA2.p3	BC093514|Rdh7|54150|retinol dehydrogenase 7	BC092255|Rdh7|54150|retinol dehydrogenase 7
mm9_v1_chrX_+_146981959_146981987	4.90007	FOXA2.p3	NM_001102446|Alas2|11656|aminolevulinic acid synthase 2, erythroid	NM_009653|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK077610|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr9_-_107571294_107571298	4.86289	FOXA2.p3	BC055339|Slc38a3|76257|solute carrier family 38, member 3
mm9_v1_chr3_-_122939013_122939066	4.83169	FOXA2.p3	BC158045|Synpo2|118449|synaptopodin 2	NM_080451|Synpo2|118449|synaptopodin 2
mm9_v1_chr7_+_29325883_29325903	4.83084	FOXA2.p3	AK003083|Sycn|68416|syncollin	BC019567|Sycn|68416|syncollin	NM_026716|Sycn|68416|syncollin
mm9_v1_chr11_+_20125239_20125296	4.81682	FOXA2.p3	AK078671|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr2_-_172765592_172765841	4.81676	FOXA2.p3	AK020411|Bmp7|12162|bone morphogenetic protein 7	X56906|Bmp7|12162|bone morphogenetic protein 7	BC010771|Bmp7|12162|bone morphogenetic protein 7	NM_007557|Bmp7|12162|bone morphogenetic protein 7
mm9_v1_chr5_+_102910569_102910573	4.80285	FOXA2.p3	BC025502|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr11_-_76592473_76592508	4.79529	FOXA2.p3	AK052903|Cpd|12874|carboxypeptidase D
mm9_v1_chr6_+_146981058_146981105	4.78471	FOXA2.p3	AK008892|Rep15|66532|RAB15 effector protein	AK008964|Rep15|66532|RAB15 effector protein	NM_025620|Rep15|66532|RAB15 effector protein	BC024344|Rep15|66532|RAB15 effector protein
mm9_v1_chr3_-_29912113_29912128	4.76909	FOXA2.p3	AK085548|Mecom|14013|MDS1 and EVI1 complex locus	NM_007963|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr19_-_38118066_38118066	4.76363	FOXA2.p3	NM_001099634|Myof|226101|myoferlin
mm9_v1_chr5_+_115373246_115373254	4.74108	FOXA2.p3	AK078690|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	NM_145209|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chrX_+_93650774_93650774	4.6951	FOXA2.p3	NM_001159628|Heph|15203|hephaestin	NM_010417|Heph|15203|hephaestin
mm9_v1_chr10_-_115922360_115922443	4.68679	FOXA2.p3	AK019295|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr3_-_98566258_98566332	4.68526	FOXA2.p3	M77015|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	AK149452|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	BC089581|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001012306|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001161744|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3	NM_001161745|Hsd3b3|15494|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3
mm9_v1_chr11_-_48805585_48805759	4.65681	FOXA2.p3	L38444|Tgtp2|100039796|T-cell specific GTPase 2	U15636|Tgtp1|21822|T-cell specific GTPase 1	AK145236|Gm12185|620913|predicted gene 12185	BC034256|Tgtp1|21822|T-cell specific GTPase 1	BC085259|Tgtp1|21822|T-cell specific GTPase 1	BC093522|Tgtp1|21822|T-cell specific GTPase 1	AK089836|Tgtp1|21822|T-cell specific GTPase 1	AK163978|Tgtp1|21822|T-cell specific GTPase 1	AK172473|Tgtp1|21822|T-cell specific GTPase 1	AK172580|Tgtp2|100039796|T-cell specific GTPase 2	NM_011579|Tgtp1|21822|T-cell specific GTPase 1	NM_001145164|Tgtp2|100039796|T-cell specific GTPase 2	AK166353|Tgtp1|21822|T-cell specific GTPase 1
mm9_v1_chr16_-_5132502_5132606	4.65186	FOXA2.p3	BC057152|Ppl|19041|periplakin	AF126834|Ppl|19041|periplakin	AK142562|Ppl|19041|periplakin	NM_008909|Ppl|19041|periplakin
mm9_v1_chr11_-_83391984_83392037	4.64325	FOXA2.p3	AF128195|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128196|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128197|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128198|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128199|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128200|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128201|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128202|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128203|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128204|Ccl9|20308|chemokine (C-C motif) ligand 9	BC139318|Ccl9|20308|chemokine (C-C motif) ligand 9	BC145962|Ccl9|20308|chemokine (C-C motif) ligand 9	U49513|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151131|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155036|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154511|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154657|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155032|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151649|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr15_-_66392539_66392625	4.64263	FOXA2.p3	BC117823|Tmem71|213068|transmembrane protein 71	BC117824|Tmem71|213068|transmembrane protein 71	AK170268|Tmem71|213068|transmembrane protein 71	AK088711|Tmem71|213068|transmembrane protein 71	NM_172514|Tmem71|213068|transmembrane protein 71
mm9_v1_chr5_-_86898014_86898014	4.63001	FOXA2.p3	AK142820|Tmprss11a|194597|transmembrane protease, serine 11a	NM_001033233|Tmprss11a|194597|transmembrane protease, serine 11a
mm9_v1_chr9_-_50363242_50363242	4.62421	FOXA2.p3	NM_133217|Bco2|170752|beta-carotene oxygenase 2
mm9_v1_chr3_+_159262144_159262196	4.62386	FOXA2.p3	NM_029987|Rpe65|19892|retinal pigment epithelium 65	AK020906|Rpe65|19892|retinal pigment epithelium 65	BC090656|Rpe65|19892|retinal pigment epithelium 65	BC130028|Rpe65|19892|retinal pigment epithelium 65	AF410461|Rpe65|19892|retinal pigment epithelium 65
mm9_v1_chr6_-_119338677_119338775	4.59801	FOXA2.p3	AK148295|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr8_+_70800572_70800641	4.56226	FOXA2.p3	AK157396|Sh2d4a|72281|SH2 domain containing 4A	AK008803|Sh2d4a|72281|SH2 domain containing 4A
mm9_v1_chr2_-_134380065_134380100	4.54239	FOXA2.p3	BC018587|Hao1|15112|hydroxyacid oxidase 1, liver	AF104312|Hao1|15112|hydroxyacid oxidase 1, liver	BC119535|Hao1|15112|hydroxyacid oxidase 1, liver	BC119536|Hao1|15112|hydroxyacid oxidase 1, liver	NM_010403|Hao1|15112|hydroxyacid oxidase 1, liver	AK149565|Hao1|15112|hydroxyacid oxidase 1, liver
mm9_v1_chr17_-_57367542_57367566	4.53543	FOXA2.p3	NM_009778|C3|12266|complement component 3
mm9_v1_chr7_+_120909509_120909519	4.53006	FOXA2.p3	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr1_-_164828842_164828859	4.4975	FOXA2.p3	BC031415|Fmo2|55990|flavin containing monooxygenase 2	NM_018881|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr4_-_49562400_49562417	4.48319	FOXA2.p3	AK168997|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr15_-_78298904_78298909	4.46506	FOXA2.p3	AK004939|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr17_-_56416148_56416230	4.46277	FOXA2.p3	AK054219|Ticam1|106759|toll-like receptor adaptor molecule 1	AK089679|Ticam1|106759|toll-like receptor adaptor molecule 1	AK083836|Ticam1|106759|toll-like receptor adaptor molecule 1	AK086237|Ticam1|106759|toll-like receptor adaptor molecule 1	BC037048|Ticam1|106759|toll-like receptor adaptor molecule 1	AK155906|Ticam1|106759|toll-like receptor adaptor molecule 1	AK171578|Ticam1|106759|toll-like receptor adaptor molecule 1	AK143766|Ticam1|106759|toll-like receptor adaptor molecule 1	AK150150|Ticam1|106759|toll-like receptor adaptor molecule 1	AK155245|Ticam1|106759|toll-like receptor adaptor molecule 1	NM_174989|Ticam1|106759|toll-like receptor adaptor molecule 1
mm9_v1_chr14_-_66627993_66628046	4.46216	FOXA2.p3	BC019856|Gulo|268756|gulonolactone (L-) oxidase	BC028822|Gulo|268756|gulonolactone (L-) oxidase	BC028828|Gulo|268756|gulonolactone (L-) oxidase	AK167460|Gulo|268756|gulonolactone (L-) oxidase	AK077740|Gulo|268756|gulonolactone (L-) oxidase	NM_178747|Gulo|268756|gulonolactone (L-) oxidase
mm9_v1_chr9_-_44610921_44611015	4.40667	FOXA2.p3	BC021608|Ttc36|192653|tetratricopeptide repeat domain 36	AK165811|Ttc36|192653|tetratricopeptide repeat domain 36	BC026825|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr5_-_105539282_105539310	4.40634	FOXA2.p3	BC057170|Gbp9|236573|guanylate-binding protein 9	DQ985742|Gbp9|236573|guanylate-binding protein 9	AK165231|Gbp9|236573|guanylate-binding protein 9	AK088861|Gbp9|236573|guanylate-binding protein 9	NM_172777|Gbp9|236573|guanylate-binding protein 9
mm9_v1_chr3_-_92631151_92631173	4.40056	FOXA2.p3	BC141372|Kprp|433619|keratinocyte expressed, proline-rich	NM_028629|Kprp|433619|keratinocyte expressed, proline-rich
mm9_v1_chr19_+_29441927_29441979	4.36568	FOXA2.p3	NM_021893|Cd274|60533|CD274 antigen	BC066841|Cd274|60533|CD274 antigen	AK080003|Cd274|60533|CD274 antigen	AK154403|Cd274|60533|CD274 antigen	AK089307|Cd274|60533|CD274 antigen
mm9_v1_chr2_-_125142715_125142753	4.34507	FOXA2.p3	AK137018|Fbn1|14118|fibrillin 1
mm9_v1_chr7_-_111463903_111464008	4.33565	FOXA2.p3	BC094899|Trim12a|76681|tripartite motif-containing 12A	AK009769|Trim12a|76681|tripartite motif-containing 12A	AF220126|Trim12a|76681|tripartite motif-containing 12A	AK150759|Trim12a|76681|tripartite motif-containing 12A	AK153559|Trim12a|76681|tripartite motif-containing 12A	NM_023835|Trim12a|76681|tripartite motif-containing 12A
mm9_v1_chr1_-_39608846_39608882	4.33264	FOXA2.p3	AK040602|Rnf149|67702|ring finger protein 149
mm9_v1_chr3_-_129035406_129035666	4.32603	FOXA2.p3	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr5_-_87355527_87355556	4.27988	FOXA2.p3	BC027200|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	NM_152811|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK004971|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK050435|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1
mm9_v1_chr11_-_99982369_99982477	4.27885	FOXA2.p3	AK009677|Krt13|16663|keratin 13	X03492|Krt13|16663|keratin 13
mm9_v1_chr2_-_70663453_70663686	4.25836	FOXA2.p3	BC057369|Tlk1|228012|tousled-like kinase 1	BC051641|Tlk1|228012|tousled-like kinase 1	NM_172664|Tlk1|228012|tousled-like kinase 1
mm9_v1_chr12_-_57636046_57636092	4.22376	FOXA2.p3	AB221567|Nkx2-1|21869|NK2 homeobox 1	NM_001146198|Nkx2-1|21869|NK2 homeobox 1
mm9_v1_chr4_+_48197852_48197907	4.20819	FOXA2.p3	AK018158|Stx17|67727|syntaxin 17
mm9_v1_chr10_-_28706096_28706111	4.20458	FOXA2.p3	BC021783|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	BC055432|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK075881|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009183|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK008407|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009278|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009369|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009472|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009516|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009574|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009594|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009610|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009872|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009911|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009921|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009961|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010028|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010108|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010978|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010037|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010222|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	NM_026336|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene
mm9_v1_chr5_-_87998014_87998030	4.18215	FOXA2.p3	AK160466|Sult1d1|53315|sulfotransferase family 1D, member 1	NM_016771|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr7_+_148645664_148645872	4.17874	FOXA2.p3	BC026807|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chr11_+_85646309_85646316	4.1705	FOXA2.p3	AK149348|Tbx2|21385|T-box 2
mm9_v1_chr7_-_113358823_113358853	4.1689	FOXA2.p3	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr7_-_113102453_113102483	4.1689	FOXA2.p3	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr17_+_34375847_34375923	4.14442	FOXA2.p3	AK172191|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155650|H2-Ob|15002|histocompatibility 2, O region beta locus	NM_010389|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172273|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172299|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155144|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127027|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127028|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100707|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100710|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100709|H2-Ob|15002|histocompatibility 2, O region beta locus
mm9_v1_chr6_-_142271469_142271500	4.11307	FOXA2.p3	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr15_-_100518324_100518351	4.09459	FOXA2.p3	BC011218|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007931|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007392|Cela1|109901|chymotrypsin-like elastase family, member 1	NM_033612|Cela1|109901|chymotrypsin-like elastase family, member 1
mm9_v1_chr11_+_108256590_108256640	4.08677	FOXA2.p3	Y11356|Apoh|11818|apolipoprotein H	NM_013475|Apoh|11818|apolipoprotein H	BC011037|Apoh|11818|apolipoprotein H	BC019811|Apoh|11818|apolipoprotein H	AK010926|Apoh|11818|apolipoprotein H	S70439|Apoh|11818|apolipoprotein H	BC053338|Apoh|11818|apolipoprotein H	D10056|Apoh|11818|apolipoprotein H
mm9_v1_chr7_-_15023845_15023901	4.07831	FOXA2.p3	BC031851|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	AK050422|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene
mm9_v1_chr5_+_43906796_43906826	4.07249	FOXA2.p3	AK017441|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	NM_001135172|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	BC090967|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr11_-_43415012_43415033	4.05826	FOXA2.p3	NM_008375|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)	BC119289|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)	BC120767|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)
mm9_v1_chr5_-_109224353_109224381	4.05507	FOXA2.p3	BC132664|Tmed11|67366|transmembrane emp24 protein transport domain containing	BC132666|Tmed11|67366|transmembrane emp24 protein transport domain containing	AK019032|Tmed11|67366|transmembrane emp24 protein transport domain containing	AK007381|Tmed11|67366|transmembrane emp24 protein transport domain containing	NM_026109|Tmed11|67366|transmembrane emp24 protein transport domain containing
mm9_v1_chr3_+_69026340_69026379	4.05427	FOXA2.p3	AK018621|Arl14|71619|ADP-ribosylation factor-like 14	NM_027843|Arl14|71619|ADP-ribosylation factor-like 14	BC104368|Arl14|71619|ADP-ribosylation factor-like 14	BC104369|Arl14|71619|ADP-ribosylation factor-like 14
mm9_v1_chr1_-_65097587_65097736	4.04799	FOXA2.p3	K02584|Cryge|12968|crystallin, gamma E	BC057012|Cryge|12968|crystallin, gamma E	BC078417|Cryge|12968|crystallin, gamma E	AK014301|Cryge|12968|crystallin, gamma E	BC132506|Cryge|12968|crystallin, gamma E	BC132508|Cryge|12968|crystallin, gamma E	NM_007777|Cryge|12968|crystallin, gamma E
mm9_v1_chr12_-_104895293_104895303	4.03845	FOXA2.p3	BC013632|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr2_+_122607734_122607734	4.00421	FOXA2.p3	AF174535|Sqrdl|59010|sulfide quinone reductase-like (yeast)	NM_021507|Sqrdl|59010|sulfide quinone reductase-like (yeast)
mm9_v1_chr14_+_41945059_41945084	3.96037	FOXA2.p3	AK011333|Sftpa1|20387|surfactant associated protein A1	AK004620|Sftpa1|20387|surfactant associated protein A1	AK004788|Sftpa1|20387|surfactant associated protein A1	AK075702|Sftpa1|20387|surfactant associated protein A1	BC061096|Sftpa1|20387|surfactant associated protein A1	NM_023134|Sftpa1|20387|surfactant associated protein A1
mm9_v1_chr9_-_96978102_96978110	3.91837	FOXA2.p3	AK087750|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr4_+_41709182_41709267	3.91636	FOXA2.p3	NM_010549|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	X74953|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	BC057664|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	AK143811|Il11ra1|16157|interleukin 11 receptor, alpha chain 1
mm9_v1_chr13_+_23898861_23898926	3.89786	FOXA2.p3	AK050277|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2	AK040717|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2	NM_144836|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2	AK050184|Slc17a2|218103|solute carrier family 17 (sodium phosphate), member 2
mm9_v1_chr8_+_123651742_123651861	3.89214	FOXA2.p3	BC137805|Foxl1|14241|forkhead box L1	BC137806|Foxl1|14241|forkhead box L1	AB221616|Foxl1|14241|forkhead box L1
mm9_v1_chr10_-_127325725_127325818	3.89117	FOXA2.p3	BC024603|Rdh7|54150|retinol dehydrogenase 7	AF056194|Rdh7|54150|retinol dehydrogenase 7	NM_017473|Rdh7|54150|retinol dehydrogenase 7	NM_001150749|Rdh7|54150|retinol dehydrogenase 7
mm9_v1_chr12_+_57796625_57796715	3.881	FOXA2.p3	AK132404|Pax9|18511|paired box gene 9	NM_011041|Pax9|18511|paired box gene 9	AK034985|Pax9|18511|paired box gene 9	X84000|Pax9|18511|paired box gene 9	BC005794|Pax9|18511|paired box gene 9	BC006930|Pax9|18511|paired box gene 9
mm9_v1_chr1_+_70772288_70772496	3.8765	FOXA2.p3	BC094541|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	NM_177164|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK083856|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	BC064448|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like	AK080585|Vwc2l|320460|von Willebrand factor C domain-containing protein 2-like
mm9_v1_chr5_-_52541869_52541943	3.8642	FOXA2.p3	AK208682|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr3_-_29911982_29912077	3.85724	FOXA2.p3	AK051098|Mecom|14013|MDS1 and EVI1 complex locus	BC076620|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr10_-_14438019_14438019	3.85284	FOXA2.p3	AK018698|Gje1|76743|gap junction protein, epsilon 1	NM_029722|Gje1|76743|gap junction protein, epsilon 1
mm9_v1_chr14_-_51765134_51765162	3.84991	FOXA2.p3	AK019019|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)
mm9_v1_chr16_+_48872756_48872760	3.84589	FOXA2.p3	AJ536019|Retnlg|245195|resistin like gamma	AK158401|Retnlg|245195|resistin like gamma
mm9_v1_chr17_-_28502087_28502126	3.84095	FOXA2.p3	NM_021478|Tulp1|22157|tubby like protein 1	BC014820|Tulp1|22157|tubby like protein 1	BC029222|Tulp1|22157|tubby like protein 1
mm9_v1_chrX_+_54465272_54465331	3.83199	FOXA2.p3	BC119225|Cd40lg|21947|CD40 ligand	NM_011616|Cd40lg|21947|CD40 ligand	X65453|Cd40lg|21947|CD40 ligand	EU274582|Cd40lg|21947|CD40 ligand
mm9_v1_chr2_+_145647868_145648056	3.81379	FOXA2.p3	AK152893|Rin2|74030|Ras and Rab interactor 2	AK150680|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr7_-_118089700_118089700	3.80423	FOXA2.p3	NM_010826|Mrvi1|17540|MRV integration site 1	U63408|Mrvi1|17540|MRV integration site 1
mm9_v1_chr9_+_44884261_44884391	3.80005	FOXA2.p3	
mm9_v1_chr19_-_7785715_7785799	3.77063	FOXA2.p3	AF529221|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	BC021384|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052752|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052603|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	NM_144785|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19
mm9_v1_chr6_-_85819124_85819161	3.75002	FOXA2.p3	NM_053096|Cml2|93673|camello-like 2	BC039773|Cml2|93673|camello-like 2
mm9_v1_chr1_-_74931895_74931992	3.74115	FOXA2.p3	BC138435|Fev|260298|FEV (ETS oncogene family)	BC138436|Fev|260298|FEV (ETS oncogene family)	NM_153111|Fev|260298|FEV (ETS oncogene family)	AY049085|Fev|260298|FEV (ETS oncogene family)
mm9_v1_chr5_-_104058250_104058421	3.69312	FOXA2.p3	AJ583504|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC139343|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC139346|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC127608|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	AK018423|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	NM_029415|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6
mm9_v1_chr13_+_4058817_4058874	3.67765	FOXA2.p3	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chr12_-_58647074_58647107	3.65836	FOXA2.p3	BC096524|Foxa1|15375|forkhead box A1	NM_008259|Foxa1|15375|forkhead box A1
mm9_v1_chr13_+_23931302_23931497	3.64397	FOXA2.p3	NM_001164743|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	NM_134069|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	AK128896|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	AK143896|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC024459|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC018252|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	AK165505|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC034179|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3	BC034183|Slc17a3|105355|solute carrier family 17 (sodium phosphate), member 3
mm9_v1_chr19_+_55816320_55816547	3.63154	FOXA2.p3	AK132465|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AK035059|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AF107298|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr14_-_71166340_71166465	3.62107	FOXA2.p3	AJ297360|Xpo7|65246|exportin 7	AK041768|Xpo7|65246|exportin 7	AK051105|Xpo7|65246|exportin 7	AK035775|Xpo7|65246|exportin 7	BC029702|Xpo7|65246|exportin 7	AK164595|Xpo7|65246|exportin 7	NM_023045|Xpo7|65246|exportin 7
mm9_v1_chr1_+_166081951_166082088	3.60971	FOXA2.p3	AK137521|F5|14067|coagulation factor V	AK139240|F5|14067|coagulation factor V	AK137537|F5|14067|coagulation factor V	NM_007976|F5|14067|coagulation factor V	U52925|F5|14067|coagulation factor V
mm9_v1_chr9_+_37346839_37346878	3.6059	FOXA2.p3	NM_020518|Vsig2|57276|V-set and immunoglobulin domain containing 2	BC099457|Vsig2|57276|V-set and immunoglobulin domain containing 2	AK004478|Vsig2|57276|V-set and immunoglobulin domain containing 2	AK008920|Vsig2|57276|V-set and immunoglobulin domain containing 2
mm9_v1_chr17_+_24017842_24017962	3.58822	FOXA2.p3	NM_019910|Dcpp1|13184|demilune cell and parotid protein 1	U03711|Dcpp1|13184|demilune cell and parotid protein 1	DQ237936|Dcpp1|13184|demilune cell and parotid protein 1	BC005655|Dcpp1|13184|demilune cell and parotid protein 1	BC024627|Dcpp1|13184|demilune cell and parotid protein 1	BC090399|Dcpp1|13184|demilune cell and parotid protein 1	BC045522|Dcpp1|13184|demilune cell and parotid protein 1
mm9_v1_chr12_-_105143089_105143106	3.58548	FOXA2.p3	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC009818|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC010984|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC011041|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	M75720|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC021780|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC024108|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr6_-_119305193_119305208	3.55859	FOXA2.p3	BC030936|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr5_-_75440460_75440521	3.52443	FOXA2.p3	BC116971|Chic2|74277|cysteine-rich hydrophobic domain 2	BC116973|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr3_+_137880725_137880770	3.52334	FOXA2.p3	AK009600|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	NM_009626|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AF331802|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AF331803|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm9_v1_chr5_+_104599721_104599730	3.50923	FOXA2.p3	U67916|Dspp|666279|dentin sialophosphoprotein	BC116172|Dspp|666279|dentin sialophosphoprotein	BC116173|Dspp|666279|dentin sialophosphoprotein	BC129802|Dspp|666279|dentin sialophosphoprotein	NM_010080|Dspp|666279|dentin sialophosphoprotein
mm9_v1_chr8_+_86247034_86247066	3.50891	FOXA2.p3	
mm9_v1_chr14_+_3224445_3224445	3.49907	FOXA2.p3	AK085928|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene	NM_177135|D830030K20Rik|320333|RIKEN cDNA D830030K20 gene
mm9_v1_chr7_+_27814096_27814122	3.45388	FOXA2.p3	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr17_+_35331446_35331471	3.43803	FOXA2.p3	NM_008518|Ltb|16994|lymphotoxin B	U16985|Ltb|16994|lymphotoxin B	BC064062|Ltb|16994|lymphotoxin B	BC114919|Ltb|16994|lymphotoxin B
mm9_v1_chr12_+_112692786_112692860	3.43273	FOXA2.p3	
mm9_v1_chr12_-_105101768_105101807	3.40479	FOXA2.p3	BC057984|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr8_-_46347384_46347394	3.39899	FOXA2.p3	AK005546|F11|109821|coagulation factor XI	NM_028066|F11|109821|coagulation factor XI
mm9_v1_chr1_-_128727208_128727208	3.39136	FOXA2.p3	NM_001081756|Nckap5|210356|NCK-associated protein 5	NM_176957|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr1_-_39777833_39777833	3.3889	FOXA2.p3	AK133372|Rfx8|619289|regulatory factor X 8	NM_001145660|Rfx8|619289|regulatory factor X 8
mm9_v1_chr3_+_123045975_123046085	3.38783	FOXA2.p3	BC038038|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)	BC049257|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr15_+_25870456_25870763	3.37467	FOXA2.p3	AK167327|Fam134b|66270|family with sequence similarity 134, member B	AK146972|Fam134b|66270|family with sequence similarity 134, member B	BC019494|Fam134b|66270|family with sequence similarity 134, member B	NM_025459|Fam134b|66270|family with sequence similarity 134, member B	BC054415|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr19_+_11822048_11822136	3.37235	FOXA2.p3	AK078933|Gif|14603|gastric intrinsic factor	NM_008118|Gif|14603|gastric intrinsic factor	BC118519|Gif|14603|gastric intrinsic factor	L24191|Gif|14603|gastric intrinsic factor
mm9_v1_chr3_+_93202056_93202141	3.36538	FOXA2.p3	AK009415|Rptn|20129|repetin
mm9_v1_chr10_-_25255955_25256077	3.35734	FOXA2.p3	AK008073|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene	NM_001195596|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene
mm9_v1_chr4_-_6202747_6202782	3.34616	FOXA2.p3	BC130261|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050020|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050220|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050260|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	NM_007824|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050210|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1
mm9_v1_chr3_+_125106995_125107008	3.33361	FOXA2.p3	AF520870|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	AK140992|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	NM_022565|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm9_v1_chr13_-_101087625_101087658	3.32449	FOXA2.p3	AF135494|Naip6|17952|NLR family, apoptosis inhibitory protein 6	NM_021545|Naip7|53880|NLR family, apoptosis inhibitory protein 7
mm9_v1_chr13_-_101386865_101386925	3.32292	FOXA2.p3	DQ143929|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682659|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682661|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK156238|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_178410|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK133741|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_001038602|Marveld2|218518|MARVEL (membrane-associating) domain containing 2
mm9_v1_chr12_-_105011795_105011804	3.31559	FOXA2.p3	AK002537|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr1_-_157881946_157881946	3.30544	FOXA2.p3	NM_001160019|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chrX_+_104284572_104284678	3.28373	FOXA2.p3	AK038124|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK041351|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK088234|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	NM_172435|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	BC053707|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10
mm9_v1_chr5_+_102910409_102910555	3.27011	FOXA2.p3	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr8_-_46347363_46347377	3.25628	FOXA2.p3	BC019485|F11|109821|coagulation factor XI	AF356627|F11|109821|coagulation factor XI
mm9_v1_chr1_-_175810248_175810365	3.25491	FOXA2.p3	AK136391|Mndal|100040462|myeloid nuclear differentiation antigen like	NM_001170853|Mndal|100040462|myeloid nuclear differentiation antigen like
mm9_v1_chr5_-_121357467_121357543	3.2506	FOXA2.p3	BC057878|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	AK149613|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	BC013715|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	M33863|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	X04958|Oas1a|246730|2'-5' oligoadenylate synthetase 1A	NM_145211|Oas1a|246730|2'-5' oligoadenylate synthetase 1A
mm9_v1_chr8_+_70800426_70800556	3.24594	FOXA2.p3	NM_028182|Sh2d4a|72281|SH2 domain containing 4A
mm9_v1_chr13_+_37917957_37918060	3.24414	FOXA2.p3	BC080680|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr2_+_24192373_24192402	3.22286	FOXA2.p3	AK170378|Il1rn|16181|interleukin 1 receptor antagonist	AF001795|Il1rn|16181|interleukin 1 receptor antagonist	AK076296|Il1rn|16181|interleukin 1 receptor antagonist	NM_031167|Il1rn|16181|interleukin 1 receptor antagonist	BC042532|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr12_-_104895280_104895290	3.21844	FOXA2.p3	NM_007618|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6	X70533|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr16_+_48816968_48817099	3.21009	FOXA2.p3	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr3_+_51465127_51465166	3.20498	FOXA2.p3	BC132234|Mgst2|211666|microsomal glutathione S-transferase 2	BC132260|Mgst2|211666|microsomal glutathione S-transferase 2	BC145529|Mgst2|211666|microsomal glutathione S-transferase 2	BC028535|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr1_-_196957466_196957592	3.20378	FOXA2.p3	M23446|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC092048|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC028945|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK134226|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr12_-_104681842_104681891	3.18444	FOXA2.p3	AY090098|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK040279|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK160503|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC086889|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC100588|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	NM_029803|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A
mm9_v1_chr2_-_60511707_60511810	3.18429	FOXA2.p3	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr18_-_60908267_60908331	3.1466	FOXA2.p3	AK147282|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AK035642|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr16_+_87731736_87731769	3.14307	FOXA2.p3	AK078031|Bach1|12013|BTB and CNC homology 1
mm9_v1_chr1_+_59543450_59543567	3.13692	FOXA2.p3	
mm9_v1_chr10_+_53057491_53057558	3.12881	FOXA2.p3	NM_001141927|Pln|18821|phospholamban	NM_023129|Pln|18821|phospholamban	BC061097|Pln|18821|phospholamban	AK002622|Pln|18821|phospholamban	AK040718|Pln|18821|phospholamban	S46792|Pln|18821|phospholamban	AK142708|Pln|18821|phospholamban	AK052199|Pln|18821|phospholamban
mm9_v1_chr3_+_84470113_84470209	3.10891	FOXA2.p3	AK081441|Tmem154|320782|transmembrane protein 154	NM_177260|Tmem154|320782|transmembrane protein 154	AK171510|Tmem154|320782|transmembrane protein 154	BC113174|Tmem154|320782|transmembrane protein 154	BC113175|Tmem154|320782|transmembrane protein 154	AK154236|Tmem154|320782|transmembrane protein 154	AK037111|Tmem154|320782|transmembrane protein 154
mm9_v1_chr6_+_42211957_42211968	3.10396	FOXA2.p3	AK053212|Tmem139|109218|transmembrane protein 139	NM_175408|Tmem139|109218|transmembrane protein 139
mm9_v1_chr12_-_103196366_103196464	3.09621	FOXA2.p3	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr4_+_133958826_133958933	3.09303	FOXA2.p3	AK156774|Pafah2|100163|platelet-activating factor acetylhydrolase 2	BC021890|Pafah2|100163|platelet-activating factor acetylhydrolase 2	BC025938|Pafah2|100163|platelet-activating factor acetylhydrolase 2
mm9_v1_chr6_+_41810237_41810337	3.08919	FOXA2.p3	BC119343|Sval2|84543|seminal vesicle antigen-like 2	BC119345|Sval2|84543|seminal vesicle antigen-like 2	AB050614|Sval2|84543|seminal vesicle antigen-like 2	NM_032542|Sval2|84543|seminal vesicle antigen-like 2
mm9_v1_chr6_+_121296714_121296721	3.08556	FOXA2.p3	NM_133661|Slc6a12|14411|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12	BC019211|Slc6a12|14411|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
mm9_v1_chr11_+_87476588_87476588	3.08272	FOXA2.p3	AK032782|Rnf43|207742|ring finger protein 43	NM_172448|Rnf43|207742|ring finger protein 43
mm9_v1_chr17_+_27166203_27166342	3.08149	FOXA2.p3	AY141192|Ggnbp1|70772|gametogenetin binding protein 1	NM_027544|Ggnbp1|70772|gametogenetin binding protein 1	AB250379|Ggnbp1|70772|gametogenetin binding protein 1	AK077129|Ggnbp1|70772|gametogenetin binding protein 1	BC049764|Ggnbp1|70772|gametogenetin binding protein 1
mm9_v1_chr12_-_105195097_105195135	3.07747	FOXA2.p3	M75717|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	BC061176|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	NM_009247|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK004999|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK135650|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E
mm9_v1_chr15_-_78299035_78299081	3.06993	FOXA2.p3	BC057674|Tmprss6|71753|transmembrane serine protease 6	AY240929|Tmprss6|71753|transmembrane serine protease 6	BC029645|Tmprss6|71753|transmembrane serine protease 6	NM_027902|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr4_+_98213324_98213424	3.06578	FOXA2.p3	NM_001005787|Inadl|12695|InaD-like (Drosophila)	NM_007704|Inadl|12695|InaD-like (Drosophila)	AF060539|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr3_+_142223027_142223114	3.0631	FOXA2.p3	BC019195|Gbp3|55932|guanylate binding protein 3
mm9_v1_chr1_-_192994532_192994569	3.04854	FOXA2.p3	AK217100|Atf3|11910|activating transcription factor 3
mm9_v1_chr17_+_47641999_47642189	3.04249	FOXA2.p3	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr16_-_36666078_36666195	3.0231	FOXA2.p3	AF065897|Cd86|12524|CD86 antigen	AF065898|Cd86|12524|CD86 antigen	AF065899|Cd86|12524|CD86 antigen	AF065900|Cd86|12524|CD86 antigen	S70108|Cd86|12524|CD86 antigen	BC013807|Cd86|12524|CD86 antigen	L25606|Cd86|12524|CD86 antigen	AK079513|Cd86|12524|CD86 antigen	AK155710|Cd86|12524|CD86 antigen	AK170054|Cd86|12524|CD86 antigen	NM_019388|Cd86|12524|CD86 antigen	AK172548|Cd86|12524|CD86 antigen	AK172686|Cd86|12524|CD86 antigen
mm9_v1_chr10_-_92773579_92773713	3.01403	FOXA2.p3	AK052546|Elk3|13713|ELK3, member of ETS oncogene family	S82864|Elk3|13713|ELK3, member of ETS oncogene family	AK133847|Elk3|13713|ELK3, member of ETS oncogene family	BC053402|Elk3|13713|ELK3, member of ETS oncogene family	BC055735|Elk3|13713|ELK3, member of ETS oncogene family	AK088129|Elk3|13713|ELK3, member of ETS oncogene family
mm9_v1_chrX_-_9030859_9030884	3.0041	FOXA2.p3	AK160031|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr4_+_97444312_97444317	2.99213	FOXA2.p3	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr12_-_105101743_105101767	2.99124	FOXA2.p3	BC011040|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC037007|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC047128|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC049970|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	M75721|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	AK146619|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC057982|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC012874|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr5_+_75548309_75548318	2.98983	FOXA2.p3	NM_011058|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide	AK081664|Pdgfra|18595|platelet derived growth factor receptor, alpha polypeptide
mm9_v1_chrX_+_160600108_160600153	2.97948	FOXA2.p3	AK135357|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr4_+_97444450_97444485	2.96807	FOXA2.p3	AK054310|Nfia|18027|nuclear factor I/A	AK137731|Nfia|18027|nuclear factor I/A
mm9_v1_chr5_+_91456489_91456542	2.96735	FOXA2.p3	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr3_+_93197619_93197620	2.956	FOXA2.p3	AK009453|Rptn|20129|repetin	NM_009100|Rptn|20129|repetin
mm9_v1_chr5_-_146531642_146531721	2.94712	FOXA2.p3	BC138084|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	BC138083|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	AB033414|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A	NM_017396|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A
mm9_v1_chr12_-_104895307_104895340	2.94504	FOXA2.p3	AK145842|Serpina6|12401|serine (or cysteine) peptidase inhibitor, clade A, member 6
mm9_v1_chr10_+_110943412_110943638	2.94447	FOXA2.p3	AK158890|Phlda1|21664|pleckstrin homology-like domain, family A, member 1	AK148063|Phlda1|21664|pleckstrin homology-like domain, family A, member 1
mm9_v1_chr4_-_11118342_11118420	2.94233	FOXA2.p3	AK080292|A630034I12Rik|329790|RIKEN cDNA A630034I12 gene	AK169448|A630034I12Rik|329790|RIKEN cDNA A630034I12 gene
mm9_v1_chr4_-_111575347_111575400	2.93774	FOXA2.p3	BC021357|Slc5a9|230612|solute carrier family 5 (sodium/glucose cotransporter), member 9	AK029158|Slc5a9|230612|solute carrier family 5 (sodium/glucose cotransporter), member 9	NM_145551|Slc5a9|230612|solute carrier family 5 (sodium/glucose cotransporter), member 9
mm9_v1_chrX_+_130385546_130385673	2.92403	FOXA2.p3	BC049944|Tnmd|64103|tenomodulin	NM_022322|Tnmd|64103|tenomodulin	AF191768|Tnmd|64103|tenomodulin	AK003748|Tnmd|64103|tenomodulin	AF219993|Tnmd|64103|tenomodulin
mm9_v1_chr6_-_71094313_71094369	2.92166	FOXA2.p3	BC025604|Thnsl2|232078|threonine synthase-like 2 (bacterial)	BC051244|Thnsl2|232078|threonine synthase-like 2 (bacterial)	AK165463|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_001033929|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_178413|Thnsl2|232078|threonine synthase-like 2 (bacterial)
mm9_v1_chr5_-_105722663_105722755	2.92084	FOXA2.p3	BC141364|Gbp4|17472|guanylate binding protein 4	BC147434|Gbp4|17472|guanylate binding protein 4	BC007143|Mpa2l|100702|macrophage activation 2 like	BC057969|Mpa2l|100702|macrophage activation 2 like	AK152226|Mpa2l|100702|macrophage activation 2 like	AK128993|Mpa2l|100702|macrophage activation 2 like	BC115768|Mpa2l|100702|macrophage activation 2 like	AK171913|Mpa2l|100702|macrophage activation 2 like	NM_194336|Mpa2l|100702|macrophage activation 2 like
mm9_v1_chr11_+_70542670_70542679	2.91524	FOXA2.p3	AK159143|Kif1c|16562|kinesin family member 1C	AK164832|Kif1c|16562|kinesin family member 1C
mm9_v1_chr1_+_51345952_51345993	2.91275	FOXA2.p3	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr19_+_12535536_12535672	2.90198	FOXA2.p3	L20315|Mpeg1|17476|macrophage expressed gene 1	BC129843|Mpeg1|17476|macrophage expressed gene 1	BC129844|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr15_+_100183579_100183639	2.88336	FOXA2.p3	AB110950|Higd1c|380975|HIG1 domain family, member 1C	BC139180|AB099516|554292|cDNA sequence AB099516	BC139182|AB099516|554292|cDNA sequence AB099516	BC145570|AB099516|554292|cDNA sequence AB099516	AK143923|Mettl7a2|393082|methyltransferase like 7A2	AK144032|AB099516|554292|cDNA sequence AB099516	BC087869|Mettl7a2|393082|methyltransferase like 7A2	BC090971|Mettl7a2|393082|methyltransferase like 7A2	NM_001024672|AB099516|554292|cDNA sequence AB099516	NM_199477|Mettl7a2|393082|methyltransferase like 7A2	AB253944|Mettl7a2|393082|methyltransferase like 7A2
mm9_v1_chr9_+_50302624_50302649	2.87333	FOXA2.p3	AK005558|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AY364436|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	NM_029639|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AK002767|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC017624|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC022950|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene
mm9_v1_chr12_-_105011767_105011793	2.86028	FOXA2.p3	M75718|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr7_+_119253816_119253899	2.85673	FOXA2.p3	AK015683|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr5_-_66410130_66410223	2.84546	FOXA2.p3	AK152971|Rbm47|245945|RNA binding motif protein 47	AK049280|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr5_+_88746336_88746345	2.82787	FOXA2.p3	NM_008644|Prol1|17830|proline rich, lacrimal 1	U37531|Prol1|17830|proline rich, lacrimal 1	BC042902|Prol1|17830|proline rich, lacrimal 1	BC021158|Prol1|17830|proline rich, lacrimal 1	AF247816|Prol1|17830|proline rich, lacrimal 1	BC021401|Prol1|17830|proline rich, lacrimal 1
mm9_v1_chr17_-_36779586_36779610	2.82425	FOXA2.p3	BC106996|H2-M9|14997|histocompatibility 2, M region locus 9	AF469488|H2-M9|14997|histocompatibility 2, M region locus 9	AF539595|H2-M9|14997|histocompatibility 2, M region locus 9	NM_008205|H2-M9|14997|histocompatibility 2, M region locus 9	AK080256|H2-M9|14997|histocompatibility 2, M region locus 9
mm9_v1_chr4_-_62815137_62815208	2.81736	FOXA2.p3	X68680|Ambp|11699|alpha 1 microglobulin/bikunin	AK004907|Ambp|11699|alpha 1 microglobulin/bikunin	D28812|Ambp|11699|alpha 1 microglobulin/bikunin	NM_007443|Ambp|11699|alpha 1 microglobulin/bikunin	BC021660|Ambp|11699|alpha 1 microglobulin/bikunin
mm9_v1_chr13_-_101017247_101017293	2.81529	FOXA2.p3	AF135493|Naip5|17951|NLR family, apoptosis inhibitory protein 5	AF135492|Naip5|17951|NLR family, apoptosis inhibitory protein 5	AF381771|Naip5|17951|NLR family, apoptosis inhibitory protein 5	NM_010870|Naip5|17951|NLR family, apoptosis inhibitory protein 5	AK154408|Naip5|17951|NLR family, apoptosis inhibitory protein 5
mm9_v1_chr1_+_51346086_51346100	2.8097	FOXA2.p3	AK084096|Sdpr|20324|serum deprivation response
mm9_v1_chr6_+_56952293_56952348	2.80486	FOXA2.p3	BC125532|Vmn1r6|171193|vomeronasal 1 receptor 6	BC125534|Vmn1r6|171193|vomeronasal 1 receptor 6	NM_134175|Vmn1r6|171193|vomeronasal 1 receptor 6
mm9_v1_chr3_+_142223007_142223016	2.80163	FOXA2.p3	AK132266|Gbp3|55932|guanylate binding protein 3	NM_018734|Gbp3|55932|guanylate binding protein 3
mm9_v1_chr2_-_118554094_118554175	2.79386	FOXA2.p3	BC145249|Plcb2|18796|phospholipase C, beta 2	AK045469|Plcb2|18796|phospholipase C, beta 2	NM_177568|Plcb2|18796|phospholipase C, beta 2
mm9_v1_chrX_+_57252655_57252676	2.78517	FOXA2.p3	M23109|F9|14071|coagulation factor IX
mm9_v1_chr5_-_105668551_105668551	2.78494	FOXA2.p3	BC112328|Gbp10|626578|guanylate-binding protein 10	BC114209|Gbp10|626578|guanylate-binding protein 10	DQ985743|Gbp10|626578|guanylate-binding protein 10	NM_001039646|Gbp10|626578|guanylate-binding protein 10
mm9_v1_chr8_-_42140113_42140147	2.78318	FOXA2.p3	BC043321|Mtus1|102103|mitochondrial tumor suppressor 1	AK043214|Mtus1|102103|mitochondrial tumor suppressor 1	AY626782|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005864|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr2_+_127951773_127951787	2.76654	FOXA2.p3	AK031285|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK037885|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK150464|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK152472|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK153542|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK162975|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_009754|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207680|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207681|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK082613|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	BC019556|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK011490|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK050192|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr16_+_33829715_33830005	2.7616	FOXA2.p3	AF022110|Itgb5|16419|integrin beta 5	NM_001145884|Itgb5|16419|integrin beta 5	NM_010580|Itgb5|16419|integrin beta 5	BC058246|Itgb5|16419|integrin beta 5	AK143532|Itgb5|16419|integrin beta 5	AK140251|Itgb5|16419|integrin beta 5	BC046280|Itgb5|16419|integrin beta 5	AF043256|Itgb5|16419|integrin beta 5	AF043257|Itgb5|16419|integrin beta 5	AK087476|Itgb5|16419|integrin beta 5
mm9_v1_chr10_-_61441842_61441910	2.76113	FOXA2.p3	NM_007731|Col13a1|12817|collagen, type XIII, alpha 1	U30292|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr18_-_39078304_39078358	2.75051	FOXA2.p3	U67610|Fgf1|14164|fibroblast growth factor 1	AK035330|Fgf1|14164|fibroblast growth factor 1	NM_010197|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr6_-_85819035_85819112	2.74443	FOXA2.p3	AK050449|Cml2|93673|camello-like 2	AF163315|Cml2|93673|camello-like 2
mm9_v1_chr7_-_133768983_133769012	2.73989	FOXA2.p3	AF131196|Nupr1|56312|nuclear protein 1	NM_019738|Nupr1|56312|nuclear protein 1	BC002109|Nupr1|56312|nuclear protein 1	AK009572|Nupr1|56312|nuclear protein 1
mm9_v1_chr12_-_105011807_105011857	2.73367	FOXA2.p3	NM_009246|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr16_-_36455460_36455484	2.72144	FOXA2.p3	AY169236|Stfa3|20863|stefin A3	M92419|Stfa3|20863|stefin A3	BC107224|Stfa3|20863|stefin A3	BC107225|Stfa3|20863|stefin A3	AK014349|Stfa3|20863|stefin A3	NM_025288|Stfa3|20863|stefin A3
mm9_v1_chr10_+_18189773_18189786	2.71697	FOXA2.p3	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr6_+_48794000_48794090	2.70349	FOXA2.p3	AK180847|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr12_-_11215753_11215777	2.69254	FOXA2.p3	AF261105|Msgn1|56184|mesogenin 1	NM_019544|Msgn1|56184|mesogenin 1	BC116996|Msgn1|56184|mesogenin 1
mm9_v1_chr12_-_104976382_104976400	2.68218	FOXA2.p3	NM_009244|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr14_+_34899165_34899231	2.67615	FOXA2.p3	BC030407|Anxa8|11752|annexin A8	NM_013473|Anxa8|11752|annexin A8	AJ002390|Anxa8|11752|annexin A8	AK009085|Anxa8|11752|annexin A8	BC013271|Anxa8|11752|annexin A8	AK075870|Anxa8|11752|annexin A8
mm9_v1_chr2_+_155576943_155577133	2.66796	FOXA2.p3	NM_011171|Procr|19124|protein C receptor, endothelial	AK167302|Procr|19124|protein C receptor, endothelial	X63748|Procr|19124|protein C receptor, endothelial	L39017|Procr|19124|protein C receptor, endothelial	BC028755|Procr|19124|protein C receptor, endothelial	AK136541|Procr|19124|protein C receptor, endothelial	CT010175|Procr|19124|protein C receptor, endothelial
mm9_v1_chr2_-_126959605_126959689	2.6593	FOXA2.p3	AK042706|Ncaph|215387|non-SMC condensin I complex, subunit H	BC025060|Ncaph|215387|non-SMC condensin I complex, subunit H	BC021499|Ncaph|215387|non-SMC condensin I complex, subunit H	AK028919|Ncaph|215387|non-SMC condensin I complex, subunit H	AK080433|Ncaph|215387|non-SMC condensin I complex, subunit H	NM_144818|Ncaph|215387|non-SMC condensin I complex, subunit H
mm9_v1_chr3_-_37131486_37131557	2.65284	FOXA2.p3	AY428162|Il21|60505|interleukin 21	DQ645418|Il21|60505|interleukin 21	BC125414|Il21|60505|interleukin 21	BC125416|Il21|60505|interleukin 21	AF254070|Il21|60505|interleukin 21	NM_021782|Il21|60505|interleukin 21
mm9_v1_chr5_-_31490075_31490203	2.63449	FOXA2.p3	
mm9_v1_chr6_-_136730254_136730285	2.62288	FOXA2.p3	BC099968|Gucy2c|14917|guanylate cyclase 2c	NM_001127318|Gucy2c|14917|guanylate cyclase 2c	NM_145067|Gucy2c|14917|guanylate cyclase 2c	AK136496|Gucy2c|14917|guanylate cyclase 2c
mm9_v1_chrX_-_138159759_138159833	2.62087	FOXA2.p3	BC060235|Irs4|16370|insulin receptor substrate 4	NM_010572|Irs4|16370|insulin receptor substrate 4	BC150782|Irs4|16370|insulin receptor substrate 4
mm9_v1_chrY_-_582062_582201	2.61492	FOXA2.p3	AK162410|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK220463|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK155922|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AF057367|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	BC053061|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK043154|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	NM_009484|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142344|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome	AK142512|Uty|22290|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm9_v1_chr12_+_66018897_66018897	2.61438	FOXA2.p3	BC099503|Gm527|217648|predicted gene 527	NM_001025605|Gm527|217648|predicted gene 527
mm9_v1_chr4_-_117881591_117881662	2.61206	FOXA2.p3	AK135889|Ptprf|19268|protein tyrosine phosphatase, receptor type, F
mm9_v1_chr5_+_150076605_150076688	2.60307	FOXA2.p3	AK004002|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	BC026209|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	NM_009663|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	AK075967|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein	M96554|Alox5ap|11690|arachidonate 5-lipoxygenase activating protein
mm9_v1_chr19_+_30307446_30307456	2.59384	FOXA2.p3	D11440|Mbl2|17195|mannose-binding lectin (protein C) 2	NM_010776|Mbl2|17195|mannose-binding lectin (protein C) 2
mm9_v1_chr10_-_39451772_39451860	2.58078	FOXA2.p3	AK049799|E130307A14Rik|327744|RIKEN cDNA E130307A14 gene	AK164126|E130307A14Rik|327744|RIKEN cDNA E130307A14 gene
mm9_v1_chr3_+_51465095_51465114	2.57773	FOXA2.p3	NM_174995|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr7_+_50606710_50606917	2.57731	FOXA2.p3	AK087658|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK155469|Siglec5|233186|sialic acid binding Ig-like lectin 5	AF293371|Siglec5|233186|sialic acid binding Ig-like lectin 5	NM_145581|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK146203|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145038|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145987|Siglec5|233186|sialic acid binding Ig-like lectin 5	AY210401|Siglec5|233186|sialic acid binding Ig-like lectin 5
mm9_v1_chr5_-_65323937_65324139	2.57151	FOXA2.p3	AY009154|Tlr1|21897|toll-like receptor 1	NM_030682|Tlr1|21897|toll-like receptor 1	BC141319|Tlr1|21897|toll-like receptor 1	BC141321|Tlr1|21897|toll-like receptor 1
mm9_v1_chr6_+_41797547_41797583	2.55811	FOXA2.p3	AK138795|Pip|18716|prolactin induced protein	NM_008843|Pip|18716|prolactin induced protein	S73282|Pip|18716|prolactin induced protein	X02510|Pip|18716|prolactin induced protein	BC028889|Pip|18716|prolactin induced protein	AB017907|Pip|18716|prolactin induced protein	BC018264|Pip|18716|prolactin induced protein
mm9_v1_chr5_-_146617411_146617451	2.55777	FOXA2.p3	BC125522|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	AB039380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	NM_177380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44
mm9_v1_chr19_-_5801011_5801112	2.55205	FOXA2.p3	AK008790|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr4_+_114971650_114971729	2.55176	FOXA2.p3	NM_177406|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC014721|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC026582|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC025936|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC033924|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	AK144260|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a	BC031141|Cyp4a12a|277753|cytochrome P450, family 4, subfamily a, polypeptide 12a
mm9_v1_chr8_+_123651584_123651584	2.55071	FOXA2.p3	NM_008024|Foxl1|14241|forkhead box L1
mm9_v1_chr3_+_89254695_89254739	2.54912	FOXA2.p3	AK009590|2310033F14Rik|69555|RIKEN cDNA 2310033F14 gene
mm9_v1_chr2_+_34729973_34730037	2.54084	FOXA2.p3	AK021330|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	BC021771|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr1_+_45401659_45401671	2.5387	FOXA2.p3	AK079113|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr12_-_105101825_105101829	2.53204	FOXA2.p3	NM_009243|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr2_+_164571458_164571553	2.5272	FOXA2.p3	AK018299|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK145239|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168357|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168315|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	BC003486|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	NM_133763|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AB045974|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1
mm9_v1_chr11_+_85413817_85413884	2.51551	FOXA2.p3	AK078571|7030407E18Rik|399600|RIKEN cDNA 7030407E18 gene
mm9_v1_chr14_+_102239673_102239864	2.50983	FOXA2.p3	AK053129|Lmo7|380928|LIM domain only 7	AK143133|Lmo7|380928|LIM domain only 7	AK129231|Lmo7|380928|LIM domain only 7
mm9_v1_chr3_+_52072302_52072340	2.50221	FOXA2.p3	AK137629|Foxo1|56458|forkhead box O1	AF114258|Foxo1|56458|forkhead box O1
mm9_v1_chr12_-_105066203_105066249	2.50046	FOXA2.p3	BC037008|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr1_+_157882793_157883024	2.49875	FOXA2.p3	NM_172843|Tor1aip2|240832|torsin A interacting protein 2	AK150117|Tor1aip2|240832|torsin A interacting protein 2	NM_001160180|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr6_-_127089169_127089223	2.49867	FOXA2.p3	AK182883|Ccnd2|12444|cyclin D2
mm9_v1_chr19_+_32670279_32670283	2.49632	FOXA2.p3	AK137675|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr6_+_128612402_128612426	2.48398	FOXA2.p3	AK136426|Clec2h|94071|C-type lectin domain family 2, member h	AK090364|Clec2h|94071|C-type lectin domain family 2, member h	NM_053165|Clec2h|94071|C-type lectin domain family 2, member h	AK017207|Clec2h|94071|C-type lectin domain family 2, member h	AF350410|Clec2h|94071|C-type lectin domain family 2, member h	BC021766|Clec2h|94071|C-type lectin domain family 2, member h
mm9_v1_chr6_-_119303490_119303640	2.47665	FOXA2.p3	AK003228|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr6_-_52108249_52108315	2.47485	FOXA2.p3	BC138097|Hoxa1|15394|homeobox A1	BC138098|Hoxa1|15394|homeobox A1	M22115|Hoxa1|15394|homeobox A1	AK143943|Hoxa1|15394|homeobox A1	AK083575|Hoxa1|15394|homeobox A1	NM_010449|Hoxa1|15394|homeobox A1
mm9_v1_chr2_-_89892475_89892478	2.47296	FOXA2.p3	BC111111|Olfr140|57272|olfactory receptor 140	BC141888|Olfr140|57272|olfactory receptor 140	NM_020515|Olfr140|57272|olfactory receptor 140
mm9_v1_chr7_-_149865451_149865614	2.46886	FOXA2.p3	BC145554|Ins2|16334|insulin II	BC132650|Ins2|16334|insulin II	BC132652|Ins2|16334|insulin II	Z47785|Ins2|16334|insulin II	AY899305|Ins2|16334|insulin II	BC066208|Ins2|16334|insulin II	BC099934|Ins2|16334|insulin II	AK007612|Ins2|16334|insulin II	GQ915612|Ins2|16334|insulin II	NM_001185083|Ins2|16334|insulin II	NM_001185084|Ins2|16334|insulin II	NM_008387|Ins2|16334|insulin II
mm9_v1_chr19_+_12707680_12707797	2.45899	FOXA2.p3	AK039262|Glyat|107146|glycine-N-acyltransferase	NM_145935|Glyat|107146|glycine-N-acyltransferase
mm9_v1_chr19_+_32694494_32694583	2.45167	FOXA2.p3	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chrX_-_91368238_91368406	2.44754	FOXA2.p3	M32309|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr1_+_89480596_89480642	2.44453	FOXA2.p3	NM_001160165|Neu2|23956|neuraminidase 2	AF139059|Neu2|23956|neuraminidase 2
mm9_v1_chr1_-_173579057_173579105	2.443	FOXA2.p3	AB196816|Slamf7|75345|SLAM family member 7	AB196817|Slamf7|75345|SLAM family member 7	AB196818|Slamf7|75345|SLAM family member 7	AB196819|Slamf7|75345|SLAM family member 7	AB196837|Slamf7|75345|SLAM family member 7	AF467909|Slamf7|75345|SLAM family member 7	AF467910|Slamf7|75345|SLAM family member 7	AF467911|Slamf7|75345|SLAM family member 7	BC011154|Slamf7|75345|SLAM family member 7	AK172665|Slamf7|75345|SLAM family member 7
mm9_v1_chrX_+_57252630_57252647	2.44046	FOXA2.p3	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr3_+_123058707_123058740	2.43838	FOXA2.p3	AK009425|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr15_-_98438063_98438063	2.43308	FOXA2.p3	AK147516|Adcy6|11512|adenylate cyclase 6	NM_007405|Adcy6|11512|adenylate cyclase 6
mm9_v1_chr12_+_33987379_33987464	2.42998	FOXA2.p3	NM_001033436|Atxn7l1|380753|ataxin 7-like 1	AK156016|Atxn7l1|380753|ataxin 7-like 1	BC147479|Atxn7l1|380753|ataxin 7-like 1	BC147483|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr5_-_66543123_66543228	2.41835	FOXA2.p3	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr19_+_12535268_12535270	2.39772	FOXA2.p3	AK030216|Mpeg1|17476|macrophage expressed gene 1	NM_010821|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr2_+_180954720_180954720	2.39114	FOXA2.p3	BC051628|BC051628|332713|cDNA sequence BC051628	NM_199312|BC051628|332713|cDNA sequence BC051628
mm9_v1_chr11_-_117630476_117630499	2.38617	FOXA2.p3	AK183838|Tmc6|217353|transmembrane channel-like gene family 6
mm9_v1_chr2_+_127680363_127680363	2.38396	FOXA2.p3	AK004775|Acoxl|74121|acyl-Coenzyme A oxidase-like	NM_028765|Acoxl|74121|acyl-Coenzyme A oxidase-like
mm9_v1_chr1_-_52714729_52714742	2.38246	FOXA2.p3	BC016598|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr14_-_62301012_62301198	2.37169	FOXA2.p3	AK080165|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK139063|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK134888|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK042416|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK084358|Dleu2|668253|deleted in lymphocytic leukemia, 2	AF380423|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK165901|Dleu2|668253|deleted in lymphocytic leukemia, 2
mm9_v1_chr3_+_121160714_121160815	2.3615	FOXA2.p3	AK181356|Cnn3|71994|calponin 3, acidic
mm9_v1_chr1_-_173579128_173579145	2.35597	FOXA2.p3	AK040678|Slamf7|75345|SLAM family member 7	AK089525|Slamf7|75345|SLAM family member 7
mm9_v1_chr1_-_53244460_53244460	2.35485	FOXA2.p3	AK006101|1700019A02Rik|69397|RIKEN cDNA 1700019A02 gene	NM_027070|1700019A02Rik|69397|RIKEN cDNA 1700019A02 gene
mm9_v1_chrY_-_133778_133851	2.35042	FOXA2.p3	X14382|Zfy1|22767|zinc finger protein 1, Y linked	AK076618|Zfy1|22767|zinc finger protein 1, Y linked	NM_009570|Zfy1|22767|zinc finger protein 1, Y linked
mm9_v1_chr7_+_107685608_107685745	2.33409	FOXA2.p3	AK161506|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	NM_183270|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK019895|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK088786|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116995|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116997|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC096605|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK008883|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC048574|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8
mm9_v1_chr5_-_141041020_141041022	2.32845	FOXA2.p3	AK021365|Grifin|77998|galectin-related inter-fiber protein	BC107323|Grifin|77998|galectin-related inter-fiber protein	BC107324|Grifin|77998|galectin-related inter-fiber protein	NM_030022|Grifin|77998|galectin-related inter-fiber protein
mm9_v1_chr16_+_22920274_22920459	2.32646	FOXA2.p3	NM_001083904|Fetub|59083|fetuin beta	NM_021564|Fetub|59083|fetuin beta	AY138459|Fetub|59083|fetuin beta	AJ242927|Fetub|59083|fetuin beta
mm9_v1_chr19_+_12708001_12708022	2.31916	FOXA2.p3	AK143803|Glyat|107146|glycine-N-acyltransferase	AK143901|Glyat|107146|glycine-N-acyltransferase	BC010799|Glyat|107146|glycine-N-acyltransferase	BC015294|Glyat|107146|glycine-N-acyltransferase
mm9_v1_chr7_-_3249539_3249740	2.31391	FOXA2.p3	AY364010|Nlrp12|378425|NLR family, pyrin domain containing 12	BC116252|Nlrp12|378425|NLR family, pyrin domain containing 12	BC116253|Nlrp12|378425|NLR family, pyrin domain containing 12	AK158158|Nlrp12|378425|NLR family, pyrin domain containing 12	NM_001033431|Nlrp12|378425|NLR family, pyrin domain containing 12
mm9_v1_chr12_-_85741801_85741813	2.31194	FOXA2.p3	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr6_+_90416405_90416438	2.30523	FOXA2.p3	BC013486|Klf15|66277|Kruppel-like factor 15	AF317225|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr8_+_41837561_41837564	2.30241	FOXA2.p3	AF167403|Adam25|23793|a disintegrin and metallopeptidase domain 25 (testase 2)	NM_011781|Adam25|23793|a disintegrin and metallopeptidase domain 25 (testase 2)	AK016581|Adam25|23793|a disintegrin and metallopeptidase domain 25 (testase 2)
mm9_v1_chr15_+_6395353_6395370	2.28933	FOXA2.p3	X05475|C9|12279|complement component 9
mm9_v1_chr5_-_87766219_87766221	2.28773	FOXA2.p3	AK050327|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3	NM_028094|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3
mm9_v1_chr4_-_86314560_86314608	2.28538	FOXA2.p3	AK179029|Plin2|11520|perilipin 2	AY035850|Plin2|11520|perilipin 2	AY035851|Plin2|11520|perilipin 2
mm9_v1_chr15_+_80541675_80541764	2.28417	FOXA2.p3	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr14_+_56372605_56372670	2.28346	FOXA2.p3	AK208092|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr5_-_143289202_143289233	2.28259	FOXA2.p3	Z21858|Tff1|21784|trefoil factor 1	AK008625|Tff1|21784|trefoil factor 1	AK008809|Tff1|21784|trefoil factor 1	AK010179|Tff1|21784|trefoil factor 1	AK160174|Tff1|21784|trefoil factor 1	BC117054|Tff1|21784|trefoil factor 1	BC117056|Tff1|21784|trefoil factor 1	AK008873|Tff1|21784|trefoil factor 1	AK131896|Tff1|21784|trefoil factor 1	NM_009362|Tff1|21784|trefoil factor 1
mm9_v1_chr13_-_41165827_41165833	2.28002	FOXA2.p3	X66983|Mak|17152|male germ cell-associated kinase	NM_008547|Mak|17152|male germ cell-associated kinase
mm9_v1_chr1_+_169298077_169298107	2.27687	FOXA2.p3	AK208220|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1
mm9_v1_chrX_-_91368427_91368500	2.26249	FOXA2.p3	BC028506|Zfx|22764|zinc finger protein X-linked	M32308|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr3_+_84470230_84470299	2.2507	FOXA2.p3	BC096432|Tmem154|320782|transmembrane protein 154	AK170385|Tmem154|320782|transmembrane protein 154	AK170665|Tmem154|320782|transmembrane protein 154	AK170626|Tmem154|320782|transmembrane protein 154
mm9_v1_chr5_-_135422795_135422804	2.24812	FOXA2.p3	AK162721|Cldn4|12740|claudin 4	AK145152|Cldn4|12740|claudin 4	NM_009903|Cldn4|12740|claudin 4
mm9_v1_chr2_-_126719808_126719853	2.24269	FOXA2.p3	AK080421|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene	AK081953|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene
mm9_v1_chr13_-_55528131_55528182	2.24158	FOXA2.p3	BC037085|F12|58992|coagulation factor XII (Hageman factor)	X99571|F12|58992|coagulation factor XII (Hageman factor)	BC049867|F12|58992|coagulation factor XII (Hageman factor)	BC057921|F12|58992|coagulation factor XII (Hageman factor)	NM_021489|F12|58992|coagulation factor XII (Hageman factor)
mm9_v1_chr16_+_22951183_22951214	2.24008	FOXA2.p3	AY135662|Hrg|94175|histidine-rich glycoprotein	AB055897|Hrg|94175|histidine-rich glycoprotein	BC011168|Hrg|94175|histidine-rich glycoprotein	AF194028|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chrX_-_46641408_46641425	2.2292	FOXA2.p3	AK028343|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK034058|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK041822|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	NM_145951|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2
mm9_v1_chr12_-_105143108_105143185	2.22886	FOXA2.p3	BC021325|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	NM_009245|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr3_-_127111869_127111953	2.22397	FOXA2.p3	AK047866|Ank2|109676|ankyrin 2, brain	AK084070|Ank2|109676|ankyrin 2, brain	AK036179|Ank2|109676|ankyrin 2, brain	AK166115|Ank2|109676|ankyrin 2, brain	AK046947|Ank2|109676|ankyrin 2, brain
mm9_v1_chr7_-_48755259_48755259	2.21884	FOXA2.p3	AK164198|AW146154|101835|expressed sequence AW146154	NM_001033530|AW146154|101835|expressed sequence AW146154
mm9_v1_chr17_-_44873596_44873596	2.20889	FOXA2.p3	D14636|Runx2|12393|runt related transcription factor 2	D14637|Runx2|12393|runt related transcription factor 2	NM_001145920|Runx2|12393|runt related transcription factor 2
mm9_v1_chr5_-_105482574_105482592	2.20047	FOXA2.p3	BC031475|Gbp8|76074|guanylate-binding protein 8	NM_029509|Gbp8|76074|guanylate-binding protein 8
mm9_v1_chr3_+_95465860_95465866	2.19082	FOXA2.p3	AK160634|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr6_+_24547768_24547771	2.18123	FOXA2.p3	AK147141|Lmod2|93677|leiomodin 2 (cardiac)	NM_053098|Lmod2|93677|leiomodin 2 (cardiac)
mm9_v1_chr5_-_74023659_74023666	2.1764	FOXA2.p3	BC031901|Lrrc66|231296|leucine rich repeat containing 66	NM_153568|Lrrc66|231296|leucine rich repeat containing 66	AK051875|Lrrc66|231296|leucine rich repeat containing 66
mm9_v1_chr10_+_101837068_101837081	2.17544	FOXA2.p3	AK018672|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK033482|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_026243|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK018574|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	BC046987|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chrX_+_109424956_109425024	2.175	FOXA2.p3	AK028953|Apool|68117|apolipoprotein O-like	AK079141|Apool|68117|apolipoprotein O-like	AK012398|Apool|68117|apolipoprotein O-like	AK012804|Apool|68117|apolipoprotein O-like	AK020156|Apool|68117|apolipoprotein O-like	AK088869|Apool|68117|apolipoprotein O-like	AK086522|Apool|68117|apolipoprotein O-like	BC024334|Apool|68117|apolipoprotein O-like	NM_026565|Apool|68117|apolipoprotein O-like
mm9_v1_chr10_-_61441817_61441832	2.15545	FOXA2.p3	BC034164|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr2_+_34631709_34631818	2.15103	FOXA2.p3	AK208906|Hspa5|14828|heat shock protein 5
mm9_v1_chr4_+_155590035_155590043	2.14973	FOXA2.p3	AK036660|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene	NM_172417|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene	AK040833|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene
mm9_v1_chr4_+_97444326_97444386	2.14518	FOXA2.p3	BC075702|Nfia|18027|nuclear factor I/A	D90172|Nfia|18027|nuclear factor I/A
mm9_v1_chr15_+_6395311_6395349	2.14327	FOXA2.p3	BC011137|C9|12279|complement component 9	NM_013485|C9|12279|complement component 9
mm9_v1_chr6_+_142246944_142246973	2.13827	FOXA2.p3	NM_010491|Iapp|15874|islet amyloid polypeptide	BC027527|Iapp|15874|islet amyloid polypeptide
mm9_v1_chr8_+_34807688_34807718	2.13498	FOXA2.p3	AK027984|Gsr|14782|glutathione reductase
mm9_v1_chr1_+_154622471_154622540	2.12285	FOXA2.p3	
mm9_v1_chr16_-_38800293_38800318	2.11996	FOXA2.p3	BC046604|Upk1b|22268|uroplakin 1B	AK083101|Upk1b|22268|uroplakin 1B	AK086926|Upk1b|22268|uroplakin 1B	AK053004|Upk1b|22268|uroplakin 1B	NM_178924|Upk1b|22268|uroplakin 1B
mm9_v1_chr11_+_100195720_100195736	2.11429	FOXA2.p3	X94758|Gast|14459|gastrin	AK019058|Gast|14459|gastrin	AK008062|Gast|14459|gastrin	AK008159|Gast|14459|gastrin	AK008313|Gast|14459|gastrin	AK008420|Gast|14459|gastrin	AK008494|Gast|14459|gastrin	AK008649|Gast|14459|gastrin	NM_010257|Gast|14459|gastrin	BC064791|Gast|14459|gastrin
mm9_v1_chr18_+_43923976_43923988	2.10254	FOXA2.p3	AK136373|Scgb3a2|117158|secretoglobin, family 3A, member 2	AK136396|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274959|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274960|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274961|Scgb3a2|117158|secretoglobin, family 3A, member 2	BC061046|Scgb3a2|117158|secretoglobin, family 3A, member 2	NM_054038|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF439546|Scgb3a2|117158|secretoglobin, family 3A, member 2
mm9_v1_chr5_-_17394776_17394776	2.09198	FOXA2.p3	NM_001159558|Cd36|12491|CD36 antigen
mm9_v1_chr8_-_28266926_28267017	2.09193	FOXA2.p3	BC091001|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)
mm9_v1_chr6_-_87759747_87759783	2.09161	FOXA2.p3	NM_133717|Rab43|69834|RAB43, member RAS oncogene family	BC010248|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr2_+_34729897_34729955	2.08814	FOXA2.p3	AK033810|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	AK085616|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	NM_030021|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr1_+_51346108_51346149	2.07755	FOXA2.p3	S67386|Sdpr|20324|serum deprivation response	BC020008|Sdpr|20324|serum deprivation response
mm9_v1_chr12_-_82480450_82480472	2.07444	FOXA2.p3	BC141094|Gm4787|214321|predicted gene 4787	NM_001038995|Gm4787|214321|predicted gene 4787
mm9_v1_chr6_-_114871769_114871855	2.06699	FOXA2.p3	BC048841|Vgll4|232334|vestigial like 4 (Drosophila)	NM_177683|Vgll4|232334|vestigial like 4 (Drosophila)	BC060305|Vgll4|232334|vestigial like 4 (Drosophila)	AK144447|Vgll4|232334|vestigial like 4 (Drosophila)	AK078466|Vgll4|232334|vestigial like 4 (Drosophila)
mm9_v1_chr11_-_58977197_58977301	2.05763	FOXA2.p3	AK172525|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	AK038625|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	AK133203|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	NM_173785|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene	BC094909|A230051G13Rik|216792|RIKEN cDNA A230051G13 gene
mm9_v1_chr19_+_9092973_9093058	2.04043	FOXA2.p3	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr8_-_27109536_27109553	2.03711	FOXA2.p3	
mm9_v1_chr7_-_88060541_88060574	2.03098	FOXA2.p3	AK184425|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr3_+_98026078_98026095	2.02926	FOXA2.p3	AK008049|Reg4|67709|regenerating islet-derived family, member 4	AK008438|Reg4|67709|regenerating islet-derived family, member 4	AK162316|Reg4|67709|regenerating islet-derived family, member 4	NM_026328|Reg4|67709|regenerating islet-derived family, member 4	AK160329|Reg4|67709|regenerating islet-derived family, member 4	BC019465|Reg4|67709|regenerating islet-derived family, member 4
mm9_v1_chr19_-_34952377_34952406	2.02701	FOXA2.p3	AF200357|Pank1|75735|pantothenate kinase 1	AK050222|Pank1|75735|pantothenate kinase 1	NM_023792|Pank1|75735|pantothenate kinase 1
mm9_v1_chr13_-_96295153_96295194	2.00978	FOXA2.p3	AX785009|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	Z48043|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	BC025432|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK144986|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK158462|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK160916|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	NM_007974|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1
mm9_v1_chr17_+_74898763_74898780	1.99695	FOXA2.p3	AK086213|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr19_+_58586482_58586511	1.99655	FOXA2.p3	AK005864|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene	NM_029372|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene	BC049707|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene
mm9_v1_chr10_+_61715185_61715185	1.98852	FOXA2.p3	NM_009314|Tacr2|21337|tachykinin receptor 2	X62933|Tacr2|21337|tachykinin receptor 2
mm9_v1_chr11_-_32122236_32122250	1.97543	FOXA2.p3	BC027346|Rhbdf1|13650|rhomboid family 1 (Drosophila)
mm9_v1_chr3_-_15748418_15748511	1.97108	FOXA2.p3	AK036935|Sirpb1a|320832|signal-regulatory protein beta 1A	DQ055453|LOC100038947|100038947|signal-regulatory protein beta 1-like	NM_001173459|LOC100038947|100038947|signal-regulatory protein beta 1-like	AB112023|Sirpb1a|320832|signal-regulatory protein beta 1A	AK170671|Sirpb1a|320832|signal-regulatory protein beta 1A	AK054545|Sirpb1a|320832|signal-regulatory protein beta 1A	BC145417|Sirpb1a|320832|signal-regulatory protein beta 1A	BC145418|Sirpb1a|320832|signal-regulatory protein beta 1A	AB112024|Sirpb1a|320832|signal-regulatory protein beta 1A	AK040982|Sirpb1a|320832|signal-regulatory protein beta 1A	AK155731|Sirpb1a|320832|signal-regulatory protein beta 1A	AK041165|Sirpb1a|320832|signal-regulatory protein beta 1A	AB109404|Sirpb1a|320832|signal-regulatory protein beta 1A
mm9_v1_chr8_-_71601126_71601131	1.96787	FOXA2.p3	AK076433|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	AK144034|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr6_+_78320878_78320878	1.96649	FOXA2.p3	D63359|Reg3b|18489|regenerating islet-derived 3 beta	NM_011036|Reg3b|18489|regenerating islet-derived 3 beta
mm9_v1_chr14_-_122364309_122364416	1.96293	FOXA2.p3	BC052868|Gpr183|321019|G protein-coupled receptor 183	AK141593|Gpr183|321019|G protein-coupled receptor 183	AK153216|Gpr183|321019|G protein-coupled receptor 183	AK087951|Gpr183|321019|G protein-coupled receptor 183	AK156005|Gpr183|321019|G protein-coupled receptor 183	AK156289|Gpr183|321019|G protein-coupled receptor 183	NM_183031|Gpr183|321019|G protein-coupled receptor 183	AK138693|Gpr183|321019|G protein-coupled receptor 183
mm9_v1_chr15_+_10153734_10153771	1.95793	FOXA2.p3	M22957|Prlr|19116|prolactin receptor	M22959|Prlr|19116|prolactin receptor	AK052679|Prlr|19116|prolactin receptor
mm9_v1_chr17_+_8589493_8589596	1.95743	FOXA2.p3	AF072546|T2|21331|brachyury 2
mm9_v1_chr9_+_107885355_107885423	1.9574	FOXA2.p3	BC094906|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK043882|Cdh29|320169|cadherin-like 29	AK084619|Cdh29|320169|cadherin-like 29	NM_177090|Cdh29|320169|cadherin-like 29
mm9_v1_chr3_+_93123668_93123671	1.95666	FOXA2.p3	AK041026|Hrnr|68723|hornerin	NM_133698|Hrnr|68723|hornerin
mm9_v1_chr19_+_30307417_30307431	1.95433	FOXA2.p3	AK149484|Mbl2|17195|mannose-binding lectin (protein C) 2	S42294|Mbl2|17195|mannose-binding lectin (protein C) 2	BC010760|Mbl2|17195|mannose-binding lectin (protein C) 2
mm9_v1_chr7_+_29767872_29767891	1.95286	FOXA2.p3	NM_008279|Map4k1|26411|mitogen-activated protein kinase kinase kinase kinase 1	AK146273|Map4k1|26411|mitogen-activated protein kinase kinase kinase kinase 1	BC005433|Map4k1|26411|mitogen-activated protein kinase kinase kinase kinase 1
mm9_v1_chr11_+_82878590_82878700	1.95083	FOXA2.p3	AF099973|Slfn2|20556|schlafen 2	NM_011408|Slfn2|20556|schlafen 2	BC138749|Slfn2|20556|schlafen 2	BC138750|Slfn2|20556|schlafen 2
mm9_v1_chr9_-_89594389_89594428	1.94925	FOXA2.p3	AK208137|Tmed3|66111|transmembrane emp24 domain containing 3	AK211505|Tmed3|66111|transmembrane emp24 domain containing 3	AK212102|Tmed3|66111|transmembrane emp24 domain containing 3	AK217166|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr7_+_29610281_29610375	1.94682	FOXA2.p3	BC087924|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	AF030343|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	BC068112|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	NM_016772|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	AK088495|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal
mm9_v1_chr17_-_31301966_31301997	1.94396	FOXA2.p3	Z21858|Tff1|21784|trefoil factor 1	AK008625|Tff1|21784|trefoil factor 1	AK008809|Tff1|21784|trefoil factor 1	AK010179|Tff1|21784|trefoil factor 1	AK160174|Tff1|21784|trefoil factor 1	BC117054|Tff1|21784|trefoil factor 1	BC117056|Tff1|21784|trefoil factor 1	AK008873|Tff1|21784|trefoil factor 1	AK131896|Tff1|21784|trefoil factor 1	NM_009362|Tff1|21784|trefoil factor 1
mm9_v1_chr17_+_29455821_29455826	1.9432	FOXA2.p3	AK157854|Pi16|74116|peptidase inhibitor 16	AK158339|Pi16|74116|peptidase inhibitor 16	NM_023734|Pi16|74116|peptidase inhibitor 16
mm9_v1_chr18_+_5046584_5046587	1.93352	FOXA2.p3	AF317422|Svil|225115|supervillin	AF317423|Svil|225115|supervillin	NM_153153|Svil|225115|supervillin	HQ259291|Svil|225115|supervillin
mm9_v1_chr17_+_31345010_31345055	1.93288	FOXA2.p3	NM_177823|Ubash3a|328795|ubiquitin associated and SH3 domain containing, A	BC027561|Ubash3a|328795|ubiquitin associated and SH3 domain containing, A	AK041690|Ubash3a|328795|ubiquitin associated and SH3 domain containing, A	AK040572|Ubash3a|328795|ubiquitin associated and SH3 domain containing, A	AK169696|Ubash3a|328795|ubiquitin associated and SH3 domain containing, A
mm9_v1_chr5_-_87766195_87766202	1.92683	FOXA2.p3	BC025795|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3	AK008601|Ugt2a3|72094|UDP glucuronosyltransferase 2 family, polypeptide A3
mm9_v1_chr9_-_37519864_37519864	1.92682	FOXA2.p3	BC130240|Olfr160|80706|olfactory receptor 160	NM_030553|Olfr160|80706|olfactory receptor 160
mm9_v1_chr12_-_77896534_77896540	1.926	FOXA2.p3	NM_030677|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr9_+_123676286_123676425	1.92163	FOXA2.p3	AK162996|Ccr9|12769|chemokine (C-C motif) receptor 9	AK050615|Ccr9|12769|chemokine (C-C motif) receptor 9	AK153975|Ccr9|12769|chemokine (C-C motif) receptor 9	NM_001166625|Ccr9|12769|chemokine (C-C motif) receptor 9	NM_009913|Ccr9|12769|chemokine (C-C motif) receptor 9	AK040129|Ccr9|12769|chemokine (C-C motif) receptor 9	AJ132336|Ccr9|12769|chemokine (C-C motif) receptor 9	AJ131357|Ccr9|12769|chemokine (C-C motif) receptor 9	AK038272|Ccr9|12769|chemokine (C-C motif) receptor 9
mm9_v1_chr9_-_109306800_109306809	1.91877	FOXA2.p3	BC084593|Fbxw22|382156|F-box and WD-40 domain protein 22	AK135808|Fbxw22|382156|F-box and WD-40 domain protein 22	NM_001014395|Fbxw22|382156|F-box and WD-40 domain protein 22
mm9_v1_chr3_+_103718042_103718073	1.91685	FOXA2.p3	AB101658|Rsbn1|229675|rosbin, round spermatid basic protein 1	NM_172684|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139213|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139215|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chr8_+_36740640_36740782	1.91113	FOXA2.p3	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr15_+_10930475_10930567	1.90929	FOXA2.p3	AK029155|Slc45a2|22293|solute carrier family 45, member 2	NM_053077|Slc45a2|22293|solute carrier family 45, member 2	AK148207|Slc45a2|22293|solute carrier family 45, member 2	BC125376|Slc45a2|22293|solute carrier family 45, member 2	BC132429|Slc45a2|22293|solute carrier family 45, member 2	AK089932|Slc45a2|22293|solute carrier family 45, member 2	AY034377|Slc45a2|22293|solute carrier family 45, member 2	AF360357|Slc45a2|22293|solute carrier family 45, member 2
mm9_v1_chr2_+_25036524_25036678	1.90609	FOXA2.p3	BC069891|Nrarp|67122|Notch-regulated ankyrin repeat protein	AK012426|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr2_+_145648290_145648325	1.90218	FOXA2.p3	AK151332|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr1_+_108835529_108835558	1.89392	FOXA2.p3	AK040697|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12	AK014669|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12	BC062134|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
mm9_v1_chr8_+_95425293_95425305	1.88752	FOXA2.p3	NM_027112|Capns2|69543|calpain, small subunit 2	AK009171|Capns2|69543|calpain, small subunit 2
mm9_v1_chr8_-_48799252_48799297	1.88516	FOXA2.p3	AK048437|Cdkn2aip|70925|CDKN2A interacting protein	AK078329|Cdkn2aip|70925|CDKN2A interacting protein	AK167684|Cdkn2aip|70925|CDKN2A interacting protein	AK133831|Cdkn2aip|70925|CDKN2A interacting protein	NM_172407|Cdkn2aip|70925|CDKN2A interacting protein	AK035426|Cdkn2aip|70925|CDKN2A interacting protein	AK089057|Cdkn2aip|70925|CDKN2A interacting protein
mm9_v1_chrX_-_47988434_47988499	1.88383	FOXA2.p3	AK030946|6720401G13Rik|103012|RIKEN cDNA 6720401G13 gene
mm9_v1_chr16_+_22951144_22951164	1.88007	FOXA2.p3	NM_053176|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chr9_+_35259660_35259661	1.87904	FOXA2.p3	AF090866|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	NM_021339|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	BC109176|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes
mm9_v1_chr16_-_21995441_21995614	1.87894	FOXA2.p3	AY093499|Liph|239759|lipase, member H	AK048150|Liph|239759|lipase, member H	NM_153404|Liph|239759|lipase, member H	BC037489|Liph|239759|lipase, member H	AK161067|Liph|239759|lipase, member H	AK035498|Liph|239759|lipase, member H	AK134352|Liph|239759|lipase, member H	AK136503|Liph|239759|lipase, member H	AK162492|Liph|239759|lipase, member H	AK137278|Liph|239759|lipase, member H	NM_001083894|Liph|239759|lipase, member H
mm9_v1_chr12_+_60114357_60114456	1.87659	FOXA2.p3	AK005928|Sip1|66603|survival of motor neuron protein interacting protein 1	AK007515|Sip1|66603|survival of motor neuron protein interacting protein 1	NM_025656|Sip1|66603|survival of motor neuron protein interacting protein 1	AK013414|Sip1|66603|survival of motor neuron protein interacting protein 1	BC053424|Sip1|66603|survival of motor neuron protein interacting protein 1
mm9_v1_chr7_+_52590612_52590774	1.86941	FOXA2.p3	AK017230|Hrc|15464|histidine rich calcium binding protein	NM_010473|Hrc|15464|histidine rich calcium binding protein	AF132218|Hrc|15464|histidine rich calcium binding protein	AF158597|Hrc|15464|histidine rich calcium binding protein	BC141121|Hrc|15464|histidine rich calcium binding protein
mm9_v1_chr17_+_24054421_24054424	1.85633	FOXA2.p3	NM_001077633|Dcpp3|620253|demilune cell and parotid protein 3
mm9_v1_chr3_-_89084872_89084872	1.85551	FOXA2.p3	AK079266|Efna1|13636|ephrin A1	NM_001162425|Efna1|13636|ephrin A1
mm9_v1_chr15_-_101404334_101404334	1.84703	FOXA2.p3	AK028972|Krt75|109052|keratin 75	AK037233|Krt75|109052|keratin 75	AK076367|Krt75|109052|keratin 75	BC137935|Krt75|109052|keratin 75	BC137936|Krt75|109052|keratin 75	NM_133357|Krt75|109052|keratin 75
mm9_v1_chr17_-_35268696_35268782	1.83643	FOXA2.p3	AF207820|Apom|55938|apolipoprotein M	NM_018816|Apom|55938|apolipoprotein M	BC021597|Apom|55938|apolipoprotein M	AK004530|Apom|55938|apolipoprotein M
mm9_v1_chr7_-_139508762_139508845	1.83539	FOXA2.p3	AK019474|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	BC031443|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	AK083614|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	NM_029935|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
mm9_v1_chr4_-_49421014_49421022	1.83473	FOXA2.p3	AK050357|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	AK050308|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2	NM_145368|Acnat2|209186|acyl-coenzyme A amino acid N-acyltransferase 2
mm9_v1_chr3_-_88138354_88138379	1.83038	FOXA2.p3	AK009760|Tmem79|71913|transmembrane protein 79	NM_024246|Tmem79|71913|transmembrane protein 79
mm9_v1_chr12_+_53198729_53198769	1.8249	FOXA2.p3	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr11_-_99855307_99855307	1.81958	FOXA2.p3	AK020698|Krtap17-1|77914|keratin associated protein 17-1	NM_001099774|Krtap17-1|77914|keratin associated protein 17-1
mm9_v1_chr7_-_16457733_16457733	1.81713	FOXA2.p3	AK139691|Crx|12951|cone-rod homeobox containing gene	NM_001113330|Crx|12951|cone-rod homeobox containing gene
mm9_v1_chr4_+_138529074_138529102	1.81692	FOXA2.p3	AK171189|Tmco4|77056|transmembrane and coiled-coil domains 4	AK170619|Tmco4|77056|transmembrane and coiled-coil domains 4
mm9_v1_chr3_+_19857375_19857397	1.8154	FOXA2.p3	AK033842|Cp|12870|ceruloplasmin
mm9_v1_chr2_-_168427037_168427156	1.81213	FOXA2.p3	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr11_-_46503858_46503858	1.80674	FOXA2.p3	AB009015|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2	NM_001161356|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr5_-_53499398_53499436	1.79929	FOXA2.p3	AK009811|Sel1l3|231238|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm9_v1_chr13_-_4278605_4278680	1.79757	FOXA2.p3	AB027237|Akr1c12|622402|aldo-keto reductase family 1, member C12	BC012643|Akr1c12|622402|aldo-keto reductase family 1, member C12	BC063780|Akr1c12|622402|aldo-keto reductase family 1, member C12	AF177041|Akr1c12|622402|aldo-keto reductase family 1, member C12	AK007716|Akr1c12|622402|aldo-keto reductase family 1, member C12	NM_013777|Akr1c12|622402|aldo-keto reductase family 1, member C12
mm9_v1_chr9_+_89094110_89094142	1.79129	FOXA2.p3	BC116241|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	NM_007534|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	BC028762|Bcl2a1a|12044|B-cell leukemia/lymphoma 2 related protein A1a	AK138369|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	BC100462|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	AK152200|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b
mm9_v1_chr19_-_39537540_39537568	1.78866	FOXA2.p3	AF047725|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	AK050051|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	BC150721|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	NM_010002|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38
mm9_v1_chr7_-_87547589_87547748	1.78831	FOXA2.p3	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr19_+_45225176_45225204	1.78767	FOXA2.p3	BC018246|Tlx1|21908|T-cell leukemia, homeobox 1	NM_021901|Tlx1|21908|T-cell leukemia, homeobox 1
mm9_v1_chr17_+_71368860_71368930	1.78749	FOXA2.p3	AJ012072|Myom1|17929|myomesin 1	NM_001083934|Myom1|17929|myomesin 1	NM_010867|Myom1|17929|myomesin 1	Z22866|Myom1|17929|myomesin 1	AK052539|Myom1|17929|myomesin 1
mm9_v1_chr5_+_91223558_91223596	1.78561	FOXA2.p3	AK142955|Cxcl15|20309|chemokine (C-X-C motif) ligand 15	NM_011339|Cxcl15|20309|chemokine (C-X-C motif) ligand 15	BC061138|Cxcl15|20309|chemokine (C-X-C motif) ligand 15	AF082859|Cxcl15|20309|chemokine (C-X-C motif) ligand 15
mm9_v1_chr11_+_69906223_69906270	1.77686	FOXA2.p3	X53042|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr9_+_78039786_78039851	1.76752	FOXA2.p3	AK008400|Gsta4|14860|glutathione S-transferase, alpha 4	AK008189|Gsta4|14860|glutathione S-transferase, alpha 4	AK011841|Gsta4|14860|glutathione S-transferase, alpha 4	AK019271|Gsta4|14860|glutathione S-transferase, alpha 4	AK009668|Gsta4|14860|glutathione S-transferase, alpha 4	AK010098|Gsta4|14860|glutathione S-transferase, alpha 4	AK008193|Gsta4|14860|glutathione S-transferase, alpha 4	AK008490|Gsta4|14860|glutathione S-transferase, alpha 4	AK011177|Gsta4|14860|glutathione S-transferase, alpha 4	BC012639|Gsta4|14860|glutathione S-transferase, alpha 4	L06047|Gsta4|14860|glutathione S-transferase, alpha 4
mm9_v1_chr11_-_83392129_83392139	1.76729	FOXA2.p3	NM_011338|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr3_-_92568947_92568988	1.76318	FOXA2.p3	BC117062|Lce1h|67718|late cornified envelope 1H	BC119356|Lce1h|67718|late cornified envelope 1H	AK009424|Lce1h|67718|late cornified envelope 1H	AK010064|Lce1h|67718|late cornified envelope 1H	NM_026335|Lce1h|67718|late cornified envelope 1H
mm9_v1_chr10_+_66648458_66648510	1.7561	FOXA2.p3	AK087621|Jmjd1c|108829|jumonji domain containing 1C	AK170460|Jmjd1c|108829|jumonji domain containing 1C	AK135461|Jmjd1c|108829|jumonji domain containing 1C	AK085500|Jmjd1c|108829|jumonji domain containing 1C	AK133016|Jmjd1c|108829|jumonji domain containing 1C
mm9_v1_chr15_-_96886327_96886398	1.75378	FOXA2.p3	AK164292|Slc38a4|69354|solute carrier family 38, member 4	AK167539|Slc38a4|69354|solute carrier family 38, member 4	AK051023|Slc38a4|69354|solute carrier family 38, member 4	NM_027052|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr8_+_22427087_22427126	1.75345	FOXA2.p3	NM_007850|Defa3|13237|defensin, alpha, 3	S73391|Defa3|13237|defensin, alpha, 3	BC099854|Defa3|13237|defensin, alpha, 3	BC099855|Defa3|13237|defensin, alpha, 3
mm9_v1_chr2_-_155555105_155555210	1.74737	FOXA2.p3	AK075650|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	BC008268|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK149892|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK040560|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK079296|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK166998|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK080636|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK029164|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK155024|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	NM_145537|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2
mm9_v1_chr6_-_51413182_51413233	1.74488	FOXA2.p3	AK049735|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr10_+_42547705_42547741	1.73591	FOXA2.p3	AK180295|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chrX_-_46641384_46641392	1.72975	FOXA2.p3	AK077508|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK133956|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK137736|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	AK139897|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2	BC025915|Enox2|209224|ecto-NOX disulfide-thiol exchanger 2
mm9_v1_chr14_-_70607443_70607553	1.71923	FOXA2.p3	AF064806|Sorbs3|20410|sorbin and SH3 domain containing 3	NM_011366|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr8_-_131589372_131589416	1.7171	FOXA2.p3	AK015811|Ccdc7|74703|coiled-coil domain containing 7	AK016006|Ccdc7|74703|coiled-coil domain containing 7	EF100607|Ccdc7|74703|coiled-coil domain containing 7	NM_001197041|Ccdc7|74703|coiled-coil domain containing 7	NM_029061|Ccdc7|74703|coiled-coil domain containing 7	AY854152|Ccdc7|74703|coiled-coil domain containing 7
mm9_v1_chr2_+_129838084_129838109	1.717	FOXA2.p3	L10385|Tgm3|21818|transglutaminase 3, E polypeptide	BC129890|Tgm3|21818|transglutaminase 3, E polypeptide	BC129891|Tgm3|21818|transglutaminase 3, E polypeptide	NM_009374|Tgm3|21818|transglutaminase 3, E polypeptide
mm9_v1_chr9_+_123715592_123715616	1.70853	FOXA2.p3	AF305709|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	NM_030712|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK153914|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK052901|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AF301018|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK137703|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	BC096491|Cxcr6|80901|chemokine (C-X-C motif) receptor 6
mm9_v1_chr9_+_78039765_78039781	1.7068	FOXA2.p3	NM_010357|Gsta4|14860|glutathione S-transferase, alpha 4
mm9_v1_chr6_+_40443527_40443590	1.70588	FOXA2.p3	BC116952|Tas2r108|57253|taste receptor, type 2, member 108	AY916507|Tas2r108|57253|taste receptor, type 2, member 108	NM_020502|Tas2r108|57253|taste receptor, type 2, member 108
mm9_v1_chr1_-_141456740_141456821	1.70473	FOXA2.p3	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr16_+_34994935_34994951	1.70223	FOXA2.p3	AF314149|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr5_+_88431549_88431605	1.69781	FOXA2.p3	NM_011422|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71629|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71631|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC035428|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC034553|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC055857|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031806|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC141243|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC145569|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031921|Smr3a|20599|submaxillary gland androgen regulated protein 3A
mm9_v1_chr2_+_9804107_9804137	1.6972	FOXA2.p3	AK144308|4930412O13Rik|381347|RIKEN cDNA 4930412O13 gene
mm9_v1_chr10_+_96079634_96079769	1.69462	FOXA2.p3	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chr17_+_36974084_36974137	1.69298	FOXA2.p3	AK171019|Trim26|22670|tripartite motif-containing 26	NM_001025599|Trim26|22670|tripartite motif-containing 26	AK042252|Trim26|22670|tripartite motif-containing 26	BC037110|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr3_-_79541715_79541801	1.68657	FOXA2.p3	AY509975|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	NM_212452|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	AK137655|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1
mm9_v1_chr15_-_73537796_73537934	1.66212	FOXA2.p3	BC117783|Gpr20|239530|G protein-coupled receptor 20	AK040547|Gpr20|239530|G protein-coupled receptor 20	NM_173365|Gpr20|239530|G protein-coupled receptor 20
mm9_v1_chr14_+_18814157_18814390	1.66043	FOXA2.p3	BC089035|Thrb|21834|thyroid hormone receptor beta	NM_009380|Thrb|21834|thyroid hormone receptor beta	BC119553|Thrb|21834|thyroid hormone receptor beta	BC119552|Thrb|21834|thyroid hormone receptor beta	S62758|Thrb|21834|thyroid hormone receptor beta	AB221613|Thrb|21834|thyroid hormone receptor beta
mm9_v1_chr5_-_76760118_76760180	1.65299	FOXA2.p3	AK133140|Pdcl2|79455|phosducin-like 2	AK005814|Pdcl2|79455|phosducin-like 2	NM_023508|Pdcl2|79455|phosducin-like 2	BC048432|Pdcl2|79455|phosducin-like 2	AK006773|Pdcl2|79455|phosducin-like 2	AK005602|Pdcl2|79455|phosducin-like 2	AK006040|Pdcl2|79455|phosducin-like 2	AK132738|Pdcl2|79455|phosducin-like 2
mm9_v1_chr6_-_3918353_3918426	1.65212	FOXA2.p3	NM_009364|Tfpi2|21789|tissue factor pathway inhibitor 2	D50586|Tfpi2|21789|tissue factor pathway inhibitor 2	AK132268|Tfpi2|21789|tissue factor pathway inhibitor 2
mm9_v1_chr15_-_96850752_96850787	1.64431	FOXA2.p3	BC031717|Slc38a4|69354|solute carrier family 38, member 4	AY027919|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr7_+_17383134_17383219	1.64324	FOXA2.p3	AK182604|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK179124|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5	AK215163|Slc1a5|20514|solute carrier family 1 (neutral amino acid transporter), member 5
mm9_v1_chr16_+_24448176_24448242	1.63455	FOXA2.p3	AK054550|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	NM_001145952|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	BC085321|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr11_-_97023157_97023169	1.62841	FOXA2.p3	BC004096|Kpnb1|16211|karyopherin (importin) beta 1
mm9_v1_chr10_-_87937335_87937390	1.62818	FOXA2.p3	AK080245|Chpt1|212862|choline phosphotransferase 1
mm9_v1_chr4_-_82698070_82698070	1.62303	FOXA2.p3	AB160986|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_001198811|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr6_-_129826635_129826689	1.61561	FOXA2.p3	BC132236|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AB033769|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AK080021|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	NM_133203|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17
mm9_v1_chr13_-_97804287_97804316	1.60643	FOXA2.p3	AK006488|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	BC049576|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	AK006036|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_001080777|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_025585|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene
mm9_v1_chr12_+_79792521_79792674	1.60628	FOXA2.p3	AK014851|Fam71d|70897|family with sequence similarity 71, member D	NM_027597|Fam71d|70897|family with sequence similarity 71, member D	NM_029069|Fam71d|70897|family with sequence similarity 71, member D	BC051149|Fam71d|70897|family with sequence similarity 71, member D	AK015802|Fam71d|70897|family with sequence similarity 71, member D
mm9_v1_chr7_-_126602780_126602785	1.59881	FOXA2.p3	BC119573|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009323|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009843|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009661|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	NM_025989|Gp2|67133|glycoprotein 2 (zymogen granule membrane)
mm9_v1_chr3_-_137794277_137794364	1.58991	FOXA2.p3	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chr17_-_18020889_18020919	1.58407	FOXA2.p3	NM_013521|Fpr1|14293|formyl peptide receptor 1	AK137714|Fpr1|14293|formyl peptide receptor 1
mm9_v1_chr14_-_9091528_9091534	1.58102	FOXA2.p3	NM_053115|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr14_-_65059694_65059876	1.58065	FOXA2.p3	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr7_+_35829312_35829421	1.58005	FOXA2.p3	AK195445|Pepd|18624|peptidase D	AK197573|Pepd|18624|peptidase D	AK213891|Pepd|18624|peptidase D
mm9_v1_chr17_-_37712365_37712392	1.57924	FOXA2.p3	NM_146289|Olfr113|258286|olfactory receptor 113	BC132178|Olfr113|258286|olfactory receptor 113	BC132180|Olfr113|258286|olfactory receptor 113
mm9_v1_chrX_+_4446526_4446526	1.56154	FOXA2.p3	NM_001099643|Gm3750|100042254|predicted gene 3750
mm9_v1_chr19_-_41068625_41068698	1.55249	FOXA2.p3	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr8_-_125222837_125223008	1.55206	FOXA2.p3	BC141396|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	BC151156|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	AF038029|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	NM_009824|Cbfa2t3|12398|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm9_v1_chr6_-_14705104_14705273	1.54792	FOXA2.p3	AK084719|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	BC109007|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	BC109008|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	AK084518|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A	NM_080464|Ppp1r3a|140491|protein phosphatase 1, regulatory (inhibitor) subunit 3A
mm9_v1_chr11_-_83343962_83344025	1.54762	FOXA2.p3	AY722103|Ccl5|20304|chemokine (C-C motif) ligand 5	CT010315|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065944|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065945|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065946|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065947|Ccl5|20304|chemokine (C-C motif) ligand 5	AF128187|Ccl5|20304|chemokine (C-C motif) ligand 5	M77747|Ccl5|20304|chemokine (C-C motif) ligand 5	BC033508|Ccl5|20304|chemokine (C-C motif) ligand 5	AK158074|Ccl5|20304|chemokine (C-C motif) ligand 5	AK003101|Ccl5|20304|chemokine (C-C motif) ligand 5	NM_013653|Ccl5|20304|chemokine (C-C motif) ligand 5
mm9_v1_chr1_+_43502537_43502605	1.53987	FOXA2.p3	AK051665|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	NM_010879|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2	AK014949|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2
mm9_v1_chr19_-_11205360_11205367	1.53949	FOXA2.p3	AK006056|1700017D01Rik|69369|RIKEN cDNA 1700017D01 gene	NM_027058|1700017D01Rik|69369|RIKEN cDNA 1700017D01 gene
mm9_v1_chr14_-_122314994_122315068	1.5344	FOXA2.p3	AK172401|Gpr18|110168|G protein-coupled receptor 18	BC034872|Gpr18|110168|G protein-coupled receptor 18	NM_182806|Gpr18|110168|G protein-coupled receptor 18	AK157029|Gpr18|110168|G protein-coupled receptor 18	AK156868|Gpr18|110168|G protein-coupled receptor 18	AK156039|Gpr18|110168|G protein-coupled receptor 18
mm9_v1_chr2_-_35316760_35317051	1.534	FOXA2.p3	BC006810|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK088605|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M26925|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M85153|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AF297615|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_001145821|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_010283|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK004753|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK159087|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3
mm9_v1_chr3_-_101640128_101640145	1.52711	FOXA2.p3	NM_172295|Mab21l3|242125|mab-21-like 3 (C. elegans)
mm9_v1_chr9_+_110921791_110921833	1.52152	FOXA2.p3	AK036491|Ltf|17002|lactotransferrin	AK144556|Ltf|17002|lactotransferrin	AK150799|Ltf|17002|lactotransferrin	AK151822|Ltf|17002|lactotransferrin	AK164781|Ltf|17002|lactotransferrin	D88510|Ltf|17002|lactotransferrin	NM_008522|Ltf|17002|lactotransferrin	BC008530|Ltf|17002|lactotransferrin	AY792500|Ltf|17002|lactotransferrin	CT010339|Ltf|17002|lactotransferrin	FJ538998|Ltf|17002|lactotransferrin	J03298|Ltf|17002|lactotransferrin
mm9_v1_chr9_-_85637765_85637765	1.51977	FOXA2.p3	NM_001081282|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr4_+_106406496_106406519	1.51415	FOXA2.p3	BC026682|Fam151a|230579|family with sequence simliarity 151, member A	AY168619|Fam151a|230579|family with sequence simliarity 151, member A	BC024426|Fam151a|230579|family with sequence simliarity 151, member A	BC024430|Fam151a|230579|family with sequence simliarity 151, member A	NM_146149|Fam151a|230579|family with sequence simliarity 151, member A
mm9_v1_chr11_-_113427050_113427128	1.51313	FOXA2.p3	AK192534|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK007986|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK170673|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK049368|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	AK036999|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	BC019647|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	BC031751|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	NM_001166503|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11	NM_027216|Slc39a11|69806|solute carrier family 39 (metal ion transporter), member 11
mm9_v1_chr9_-_44152208_44152210	1.5117	FOXA2.p3	AK166734|Hmbs|15288|hydroxymethylbilane synthase
mm9_v1_chr9_+_107482499_107482500	1.50926	FOXA2.p3	BC026545|Nat6|56441|N-acetyltransferase 6	NM_019750|Nat6|56441|N-acetyltransferase 6
mm9_v1_chr1_+_165992203_165992294	1.50816	FOXA2.p3	AK170753|Sell|20343|selectin, lymphocyte	NM_001164059|Sell|20343|selectin, lymphocyte	NM_011346|Sell|20343|selectin, lymphocyte	AK161754|Sell|20343|selectin, lymphocyte	AK157273|Sell|20343|selectin, lymphocyte	AK172116|Sell|20343|selectin, lymphocyte	BC052681|Sell|20343|selectin, lymphocyte	M25324|Sell|20343|selectin, lymphocyte	X14772|Sell|20343|selectin, lymphocyte	M36005|Sell|20343|selectin, lymphocyte	M36058|Sell|20343|selectin, lymphocyte	AK137509|Sell|20343|selectin, lymphocyte
mm9_v1_chr2_-_26314921_26314925	1.50512	FOXA2.p3	AK079454|Notch1|18128|Notch gene homolog 1 (Drosophila)
mm9_v1_chr12_-_27129497_27129520	1.50323	FOXA2.p3	AK151624|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK203254|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr19_+_30104914_30105033	1.50286	FOXA2.p3	AK082518|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK031036|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK042321|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK051743|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK080925|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AK041564|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	BC060241|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	NM_144873|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2
mm9_v1_chr1_+_90303576_90303673	1.50264	FOXA2.p3	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr8_+_69035638_69035658	1.50145	FOXA2.p3	NM_028927|Tktl2|74419|transketolase-like 2	AK016603|Tktl2|74419|transketolase-like 2	AK029871|Tktl2|74419|transketolase-like 2	BC132110|Tktl2|74419|transketolase-like 2	BC132298|Tktl2|74419|transketolase-like 2
mm9_v1_chr18_+_60535680_60535700	1.49996	FOXA2.p3	AK172047|Iigp1|60440|interferon inducible GTPase 1	AK013785|Iigp1|60440|interferon inducible GTPase 1	AK153060|Iigp1|60440|interferon inducible GTPase 1	AK156611|Iigp1|60440|interferon inducible GTPase 1	NM_001146275|Iigp1|60440|interferon inducible GTPase 1	NM_021792|Iigp1|60440|interferon inducible GTPase 1	AJ007971|Iigp1|60440|interferon inducible GTPase 1
mm9_v1_chr4_-_140366562_140366564	1.49966	FOXA2.p3	AB013849|Padi3|18601|peptidyl arginine deiminase, type III	NM_011060|Padi3|18601|peptidyl arginine deiminase, type III
mm9_v1_chr6_-_83486194_83486260	1.48269	FOXA2.p3	AK146631|Actg2|11468|actin, gamma 2, smooth muscle, enteric	AK168649|Actg2|11468|actin, gamma 2, smooth muscle, enteric	BC002042|Actg2|11468|actin, gamma 2, smooth muscle, enteric	NM_009610|Actg2|11468|actin, gamma 2, smooth muscle, enteric
mm9_v1_chr1_-_157882999_157883288	1.48028	FOXA2.p3	AK152751|Tor1aip1|208263|torsin A interacting protein 1	AK139709|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr3_-_53267127_53267244	1.47886	FOXA2.p3	AK133986|Nhlrc3|212114|NHL repeat containing 3	BC087903|Nhlrc3|212114|NHL repeat containing 3	BC107356|Nhlrc3|212114|NHL repeat containing 3	AK029465|Nhlrc3|212114|NHL repeat containing 3	AK033167|Nhlrc3|212114|NHL repeat containing 3	NM_172501|Nhlrc3|212114|NHL repeat containing 3	AK162824|Nhlrc3|212114|NHL repeat containing 3	AK220477|Nhlrc3|212114|NHL repeat containing 3
mm9_v1_chr1_-_132954105_132954147	1.47574	FOXA2.p3	BC024559|Mapkapk2|17164|MAP kinase-activated protein kinase 2
mm9_v1_chr17_+_24546733_24546845	1.47013	FOXA2.p3	BC038271|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr10_+_32803288_32803366	1.46894	FOXA2.p3	NM_029726|Trdn|76757|triadin	AK009816|Trdn|76757|triadin	AF223415|Trdn|76757|triadin	AF223416|Trdn|76757|triadin	BC034343|Trdn|76757|triadin	AF223417|Trdn|76757|triadin
mm9_v1_chr3_-_101640061_101640095	1.46832	FOXA2.p3	AK161057|Mab21l3|242125|mab-21-like 3 (C. elegans)	BC037703|Mab21l3|242125|mab-21-like 3 (C. elegans)	AK172389|Mab21l3|242125|mab-21-like 3 (C. elegans)
mm9_v1_chr11_+_113485570_113485570	1.46716	FOXA2.p3	NM_001042606|Sstr2|20606|somatostatin receptor 2	NM_009217|Sstr2|20606|somatostatin receptor 2
mm9_v1_chr5_+_7960430_7960493	1.45394	FOXA2.p3	AK040760|Steap4|117167|STEAP family member 4	AJ319746|Steap4|117167|STEAP family member 4	BC006651|Steap4|117167|STEAP family member 4	NM_054098|Steap4|117167|STEAP family member 4	AY029778|Steap4|117167|STEAP family member 4
mm9_v1_chr7_-_27179256_27179261	1.45148	FOXA2.p3	AY360472|Nlrp9c|330490|NLR family, pyrin domain containing 9C	AY596203|Nlrp9c|330490|NLR family, pyrin domain containing 9C	NM_001042612|Nlrp9c|330490|NLR family, pyrin domain containing 9C
mm9_v1_chr6_-_129573858_129573881	1.44246	FOXA2.p3	AF030313|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_001083322|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK170499|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr9_-_57966613_57966629	1.43395	FOXA2.p3	AK166434|Ccdc33|382077|coiled-coil domain containing 33	AK145264|Ccdc33|382077|coiled-coil domain containing 33	NM_001166282|Ccdc33|382077|coiled-coil domain containing 33
mm9_v1_chr2_+_153956082_153956082	1.43247	FOXA2.p3	AK006829|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene	BC049691|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene	NM_028528|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene
mm9_v1_chr16_+_62814501_62814570	1.43121	FOXA2.p3	BC023414|Stx19|68159|syntaxin 19	NM_026588|Stx19|68159|syntaxin 19	AK020701|Stx19|68159|syntaxin 19	AK076337|Stx19|68159|syntaxin 19
mm9_v1_chr11_-_46512331_46512331	1.41936	FOXA2.p3	NM_001161355|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr3_-_30498769_30498835	1.4165	FOXA2.p3	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chr1_-_164742679_164742679	1.40649	FOXA2.p3	AF461145|Fmo4|226564|flavin containing monooxygenase 4	NM_144878|Fmo4|226564|flavin containing monooxygenase 4
mm9_v1_chr7_-_138465593_138465805	1.40159	FOXA2.p3	BC140992|Cuzd1|16433|CUB and zona pellucida-like domains 1	NM_008411|Cuzd1|16433|CUB and zona pellucida-like domains 1	U69699|Cuzd1|16433|CUB and zona pellucida-like domains 1
mm9_v1_chr15_-_74828317_74828336	1.39852	FOXA2.p3	BC002070|Ly6a|110454|lymphocyte antigen 6 complex, locus A	NM_010738|Ly6a|110454|lymphocyte antigen 6 complex, locus A	X04653|Ly6a|110454|lymphocyte antigen 6 complex, locus A	J03636|Ly6a|110454|lymphocyte antigen 6 complex, locus A	AK076200|Ly6a|110454|lymphocyte antigen 6 complex, locus A
mm9_v1_chr19_+_30105077_30105267	1.39834	FOXA2.p3	AK172682|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AF274047|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2	AB116653|Uhrf2|109113|ubiquitin-like, containing PHD and RING finger domains 2
mm9_v1_chr15_+_99223622_99223695	1.38677	FOXA2.p3	NM_001171035|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr5_+_137443701_137443749	1.38615	FOXA2.p3	AK008683|Cldn15|60363|claudin 15	NM_021719|Cldn15|60363|claudin 15	BC023428|Cldn15|60363|claudin 15
mm9_v1_chr6_-_142650737_142650793	1.38314	FOXA2.p3	D86037|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	D86038|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	AF003531|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	U97066|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_001044720|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_011511|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021041|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021042|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
mm9_v1_chr9_+_99512920_99512920	1.38262	FOXA2.p3	AK136425|A4gnt|333424|alpha-1,4-N-acetylglucosaminyltransferase	NM_001077424|A4gnt|333424|alpha-1,4-N-acetylglucosaminyltransferase
mm9_v1_chr3_-_82853711_82853734	1.38191	FOXA2.p3	BC031715|Fgb|110135|fibrinogen beta chain	NM_181849|Fgb|110135|fibrinogen beta chain	AK168626|Fgb|110135|fibrinogen beta chain	AK011920|Fgb|110135|fibrinogen beta chain	AK011118|Fgb|110135|fibrinogen beta chain	AK146960|Fgb|110135|fibrinogen beta chain
mm9_v1_chr12_+_99506844_99506881	1.38087	FOXA2.p3	AK134113|Gpr65|14744|G-protein coupled receptor 65	NM_008152|Gpr65|14744|G-protein coupled receptor 65	U39827|Gpr65|14744|G-protein coupled receptor 65	AK142853|Gpr65|14744|G-protein coupled receptor 65
mm9_v1_chrX_+_130385690_130385739	1.37953	FOXA2.p3	AK014761|Tnmd|64103|tenomodulin	BC006919|Tnmd|64103|tenomodulin	AB055422|Tnmd|64103|tenomodulin
mm9_v1_chr19_-_11410534_11410635	1.37797	FOXA2.p3	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr6_-_30254273_30254567	1.37508	FOXA2.p3	U19854|Ube2h|22214|ubiquitin-conjugating enzyme E2H	BC008517|Ube2h|22214|ubiquitin-conjugating enzyme E2H	AK131688|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001170345|Gm2058|100039133|predicted gene 2058	AK161414|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001169576|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_009459|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr2_-_167836092_167836117	1.37426	FOXA2.p3	BC130272|Fam65c|69553|family with sequence similarity 65, member C	NM_001080708|Fam65c|69553|family with sequence similarity 65, member C	AK158217|Fam65c|69553|family with sequence similarity 65, member C
mm9_v1_chr19_-_34952328_34952347	1.37106	FOXA2.p3	BC023496|Pank1|75735|pantothenate kinase 1
mm9_v1_chr10_-_12897796_12897828	1.37052	FOXA2.p3	AK015837|Fam164b|75122|family with sequence similarity 164, member B	BC137685|Fam164b|75122|family with sequence similarity 164, member B	BC144830|Fam164b|75122|family with sequence similarity 164, member B	NM_029172|Fam164b|75122|family with sequence similarity 164, member B
mm9_v1_chrX_-_49325948_49325948	1.36436	FOXA2.p3	AK006959|1700080O16Rik|74279|RIKEN cDNA 1700080O16 gene	NM_028851|1700080O16Rik|74279|RIKEN cDNA 1700080O16 gene
mm9_v1_chr10_+_110943341_110943375	1.36216	FOXA2.p3	NM_009344|Phlda1|21664|pleckstrin homology-like domain, family A, member 1	U44088|Phlda1|21664|pleckstrin homology-like domain, family A, member 1
mm9_v1_chr17_-_25252813_25252921	1.3617	FOXA2.p3	NM_027880|Telo2|71718|TEL2, telomere maintenance 2, homolog (S. cerevisiae)	BC080713|Telo2|71718|TEL2, telomere maintenance 2, homolog (S. cerevisiae)	AK141388|Telo2|71718|TEL2, telomere maintenance 2, homolog (S. cerevisiae)	BC013127|Telo2|71718|TEL2, telomere maintenance 2, homolog (S. cerevisiae)	AK143827|Telo2|71718|TEL2, telomere maintenance 2, homolog (S. cerevisiae)	NM_001163661|Telo2|71718|TEL2, telomere maintenance 2, homolog (S. cerevisiae)
mm9_v1_chr11_-_32122259_32122296	1.35741	FOXA2.p3	AK144437|Rhbdf1|13650|rhomboid family 1 (Drosophila)	NM_010117|Rhbdf1|13650|rhomboid family 1 (Drosophila)
mm9_v1_chr15_-_102993757_102993775	1.35263	FOXA2.p3	AK045411|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK172510|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK004735|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr6_-_136870688_136870700	1.34941	FOXA2.p3	BC104406|Erp27|69187|endoplasmic reticulum protein 27	BC104407|Erp27|69187|endoplasmic reticulum protein 27	AK007684|Erp27|69187|endoplasmic reticulum protein 27	AK007800|Erp27|69187|endoplasmic reticulum protein 27	AK131830|Erp27|69187|endoplasmic reticulum protein 27	NM_026983|Erp27|69187|endoplasmic reticulum protein 27
mm9_v1_chr5_+_65361309_65361366	1.34459	FOXA2.p3	AM162548|Fam114a1|68303|family with sequence similarity 114, member A1	BC110359|Fam114a1|68303|family with sequence similarity 114, member A1	AK030360|Fam114a1|68303|family with sequence similarity 114, member A1	NM_026667|Fam114a1|68303|family with sequence similarity 114, member A1	AK014725|Fam114a1|68303|family with sequence similarity 114, member A1	BC027235|Fam114a1|68303|family with sequence similarity 114, member A1	AK020262|Fam114a1|68303|family with sequence similarity 114, member A1	AK007950|Fam114a1|68303|family with sequence similarity 114, member A1	AK017336|Fam114a1|68303|family with sequence similarity 114, member A1	BC089499|Fam114a1|68303|family with sequence similarity 114, member A1
mm9_v1_chr18_-_58169723_58169818	1.34416	FOXA2.p3	BC063774|Fbn2|14119|fibrillin 2
mm9_v1_chr19_+_10280522_10280595	1.34293	FOXA2.p3	NM_001163431|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	BC058335|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene
mm9_v1_chr11_+_68702054_68702054	1.33481	FOXA2.p3	AK028294|Rnf222|320040|ring finger protein 222	NM_177060|Rnf222|320040|ring finger protein 222
mm9_v1_chr12_-_77896410_77896435	1.32985	FOXA2.p3	BC010823|Gpx2|14776|glutathione peroxidase 2	AK131940|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr7_+_113988126_113988127	1.3284	FOXA2.p3	NM_146596|Olfr703|258589|olfactory receptor 703	BC111815|Olfr703|258589|olfactory receptor 703
mm9_v1_chr9_+_121686724_121687001	1.32716	FOXA2.p3	BC125576|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	BC137889|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	NM_028202|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	AK009491|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	AK078669|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	AK160799|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5
mm9_v1_chr3_+_92236503_92236517	1.31957	FOXA2.p3	AY158995|Sprr2k|20765|small proline-rich protein 2K	NM_011477|Sprr2k|20765|small proline-rich protein 2K	BC116866|Sprr2k|20765|small proline-rich protein 2K	BC116868|Sprr2k|20765|small proline-rich protein 2K
mm9_v1_chr2_+_118872854_118872888	1.31816	FOXA2.p3	AK009772|Casc5|76464|cancer susceptibility candidate 5	NM_029617|Casc5|76464|cancer susceptibility candidate 5	BC080815|Casc5|76464|cancer susceptibility candidate 5	AK033132|Casc5|76464|cancer susceptibility candidate 5
mm9_v1_chr7_-_139508857_139508903	1.3147	FOXA2.p3	AK082318|Chst15|77590|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
mm9_v1_chr3_+_88968718_88968771	1.30939	FOXA2.p3	NM_001163432|Clk2|12748|CDC-like kinase 2	NM_007712|Clk2|12748|CDC-like kinase 2	AK148377|Clk2|12748|CDC-like kinase 2	BC015080|Clk2|12748|CDC-like kinase 2
mm9_v1_chr8_-_61390372_61390423	1.30567	FOXA2.p3	BC111102|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	AK080614|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	NM_175032|Galntl6|270049|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm9_v1_chr19_+_29772410_29772430	1.30321	FOXA2.p3	AK020928|Mlana|77836|melan-A	BC111114|Mlana|77836|melan-A	NM_029993|Mlana|77836|melan-A
mm9_v1_chr4_-_120781830_120781830	1.29675	FOXA2.p3	AK006456|Tmco2|69469|transmembrane and coiled-coil domains 2	NM_001081312|Tmco2|69469|transmembrane and coiled-coil domains 2
mm9_v1_chr12_-_32635061_32635121	1.29361	FOXA2.p3	AK028949|Hbp1|73389|high mobility group box transcription factor 1	AK132503|Hbp1|73389|high mobility group box transcription factor 1	AK139211|Hbp1|73389|high mobility group box transcription factor 1	AK142187|Hbp1|73389|high mobility group box transcription factor 1	AK053005|Hbp1|73389|high mobility group box transcription factor 1	AK028674|Hbp1|73389|high mobility group box transcription factor 1	BC026853|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr9_-_15105965_15105999	1.28035	FOXA2.p3	BC016078|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	NM_133732|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr1_-_175872522_175872802	1.27595	FOXA2.p3	AF022371|Ifi203|15950|interferon activated gene 203	BC008167|Ifi203|15950|interferon activated gene 203	AK164695|Ifi203|15950|interferon activated gene 203	AK161531|Ifi203|15950|interferon activated gene 203	NM_008328|Ifi203|15950|interferon activated gene 203	AK041232|Ifi203|15950|interferon activated gene 203	AK169754|Ifi203|15950|interferon activated gene 203	AK137616|Ifi203|15950|interferon activated gene 203	AK040214|Ifi203|15950|interferon activated gene 203	NM_001045481|Ifi203|15950|interferon activated gene 203	AK144663|Ifi203|15950|interferon activated gene 203
mm9_v1_chr9_+_107483009_107483202	1.27577	FOXA2.p3	AK137391|Nat6|56441|N-acetyltransferase 6	AF172275|Nat6|56441|N-acetyltransferase 6
mm9_v1_chr10_-_127648817_127648880	1.27522	FOXA2.p3	BC014757|Spryd4|66701|SPRY domain containing 4	NM_025716|Spryd4|66701|SPRY domain containing 4	AK014623|Spryd4|66701|SPRY domain containing 4	AK080726|Spryd4|66701|SPRY domain containing 4	AK082745|Spryd4|66701|SPRY domain containing 4
mm9_v1_chr6_+_121596815_121596927	1.27304	FOXA2.p3	BC023844|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr4_+_136166351_136166390	1.26354	FOXA2.p3	AK016074|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	NM_026300|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	BC048442|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	AK015053|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene
mm9_v1_chrX_-_131499291_131499292	1.25984	FOXA2.p3	BC137928|Nxf2|83454|nuclear RNA export factor 2	BC137929|Nxf2|83454|nuclear RNA export factor 2	BC145056|Nxf2|83454|nuclear RNA export factor 2	AB178900|Nxf2|83454|nuclear RNA export factor 2	AF285575|Nxf2|83454|nuclear RNA export factor 2	NM_031259|Nxf2|83454|nuclear RNA export factor 2
mm9_v1_chr14_-_9091396_9091464	1.2539	FOXA2.p3	AK144243|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain	AJ238492|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr4_+_114761644_114761734	1.25137	FOXA2.p3	BC013542|Pdzk1ip1|67182|PDZK1 interacting protein 1	AB009296|Pdzk1ip1|67182|PDZK1 interacting protein 1
mm9_v1_chr5_-_65324796_65324842	1.24763	FOXA2.p3	AK143721|Tlr1|21897|toll-like receptor 1
mm9_v1_chr9_+_109735261_109735329	1.24653	FOXA2.p3	AK004201|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)	AF051942|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)	BC002007|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)	NM_018757|Nme6|54369|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)
mm9_v1_chr2_-_84265422_84265424	1.24147	FOXA2.p3	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr9_+_7692089_7692096	1.23781	FOXA2.p3	L36244|Mmp7|17393|matrix metallopeptidase 7	AK144515|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr5_-_30848154_30848208	1.23367	FOXA2.p3	BC099558|Cib4|73259|calcium and integrin binding family member 4	BC118938|Cib4|73259|calcium and integrin binding family member 4	AK006670|Cib4|73259|calcium and integrin binding family member 4	NM_028483|Cib4|73259|calcium and integrin binding family member 4
mm9_v1_chr8_-_40727989_40728040	1.22959	FOXA2.p3	BC003814|Msr1|20288|macrophage scavenger receptor 1	AK151403|Msr1|20288|macrophage scavenger receptor 1	AK154806|Msr1|20288|macrophage scavenger receptor 1	AK028480|Msr1|20288|macrophage scavenger receptor 1	AK089178|Msr1|20288|macrophage scavenger receptor 1	AK155589|Msr1|20288|macrophage scavenger receptor 1	AK155362|Msr1|20288|macrophage scavenger receptor 1	AK150518|Msr1|20288|macrophage scavenger receptor 1	AK151855|Msr1|20288|macrophage scavenger receptor 1	NM_001113326|Msr1|20288|macrophage scavenger receptor 1	NM_031195|Msr1|20288|macrophage scavenger receptor 1
mm9_v1_chr2_+_91297678_91297857	1.22755	FOXA2.p3	NM_001145857|Lrp4|228357|low density lipoprotein receptor-related protein 4	NM_172668|Lrp4|228357|low density lipoprotein receptor-related protein 4	BC132240|Lrp4|228357|low density lipoprotein receptor-related protein 4	AF247637|Lrp4|228357|low density lipoprotein receptor-related protein 4
mm9_v1_chr6_+_139789965_139790178	1.2274	FOXA2.p3	AB008792|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	NM_011084|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054415|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054271|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054266|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	BC061142|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm9_v1_chr6_+_83692983_83693062	1.22541	FOXA2.p3	AK078810|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK168980|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AF435091|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085549|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	NM_134157|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC017127|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC080796|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052604|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC062202|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052707|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085469|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC058584|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC013168|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1
mm9_v1_chr11_+_69906145_69906162	1.22487	FOXA2.p3	BC011197|Asgr2|11890|asialoglycoprotein receptor 2	NM_007493|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr6_-_146902928_146902942	1.21961	FOXA2.p3	AK029686|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	AK006598|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	BC052362|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	AK076643|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	NM_001164236|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	NM_028509|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene
mm9_v1_chr17_+_34052312_34052432	1.21917	FOXA2.p3	
mm9_v1_chr6_+_135313056_135313087	1.21651	FOXA2.p3	AK168806|Emp1|13730|epithelial membrane protein 1	U25633|Emp1|13730|epithelial membrane protein 1	BC138491|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr11_-_100749131_100749140	1.21579	FOXA2.p3	AK004083|Stat3|20848|signal transducer and activator of transcription 3
mm9_v1_chr11_-_54769601_54769632	1.21492	FOXA2.p3	AK135338|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr3_-_101091814_101091861	1.2134	FOXA2.p3	X06143|Cd2|12481|CD2 antigen	BC053731|Cd2|12481|CD2 antigen	M18934|Cd2|12481|CD2 antigen	AK138728|Cd2|12481|CD2 antigen	AF065906|Cd2|12481|CD2 antigen	AF065907|Cd2|12481|CD2 antigen	AF065908|Cd2|12481|CD2 antigen	AF065909|Cd2|12481|CD2 antigen	AF306543|Cd2|12481|CD2 antigen	NM_013486|Cd2|12481|CD2 antigen	Y00023|Cd2|12481|CD2 antigen
mm9_v1_chr1_-_164816645_164816658	1.21003	FOXA2.p3	AK129026|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr1_+_24258538_24258666	1.20999	FOXA2.p3	AK017395|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr13_-_47201478_47201615	1.19802	FOXA2.p3	AK033451|Dek|110052|DEK oncogene (DNA binding)	AK012877|Dek|110052|DEK oncogene (DNA binding)	AK012615|Dek|110052|DEK oncogene (DNA binding)	BC055451|Dek|110052|DEK oncogene (DNA binding)	BC048844|Dek|110052|DEK oncogene (DNA binding)	AK012315|Dek|110052|DEK oncogene (DNA binding)	AK154013|Dek|110052|DEK oncogene (DNA binding)	NM_025900|Dek|110052|DEK oncogene (DNA binding)
mm9_v1_chr9_+_77961044_77961183	1.19778	FOXA2.p3	NM_019987|Ick|56542|intestinal cell kinase	AK045950|Ick|56542|intestinal cell kinase	AK164613|Ick|56542|intestinal cell kinase	AK008991|Ick|56542|intestinal cell kinase	AK133537|Ick|56542|intestinal cell kinase	AK087484|Ick|56542|intestinal cell kinase
mm9_v1_chr17_+_12777054_12777126	1.19715	FOXA2.p3	AJ006036|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	NM_013667|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK143892|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK052658|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC069911|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC015250|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2
mm9_v1_chr15_+_100959342_100959354	1.19524	FOXA2.p3	BC015083|Acvrl1|11482|activin A receptor, type II-like 1	BC014291|Acvrl1|11482|activin A receptor, type II-like 1
mm9_v1_chr7_-_110401018_110401018	1.18723	FOXA2.p3	AF393638|Dub2a|384701|deubiquitinating enzyme 2a	NM_001001559|Dub2a|384701|deubiquitinating enzyme 2a
mm9_v1_chr19_+_5041341_5041422	1.18637	FOXA2.p3	AF233580|Brms1|107392|breast cancer metastasis-suppressor 1	AK076729|Brms1|107392|breast cancer metastasis-suppressor 1	BC016108|Brms1|107392|breast cancer metastasis-suppressor 1	NM_134155|Brms1|107392|breast cancer metastasis-suppressor 1	BC003485|Brms1|107392|breast cancer metastasis-suppressor 1
mm9_v1_chr11_+_104953532_104953539	1.18575	FOXA2.p3	NM_001081046|Efcab3|70894|EF-hand calcium binding domain 3	BC050801|Efcab3|70894|EF-hand calcium binding domain 3	AK014861|Efcab3|70894|EF-hand calcium binding domain 3
mm9_v1_chr2_+_24200807_24200875	1.18256	FOXA2.p3	AK171037|Il1rn|16181|interleukin 1 receptor antagonist	NM_001159562|Il1rn|16181|interleukin 1 receptor antagonist	M64404|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr12_-_76815494_76815519	1.18195	FOXA2.p3	
mm9_v1_chr9_-_123893240_123893240	1.17905	FOXA2.p3	BC127143|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	BC128466|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	NM_007718|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1
mm9_v1_chr4_+_97444494_97444517	1.17352	FOXA2.p3	AK052204|Nfia|18027|nuclear factor I/A
mm9_v1_chr17_-_57367499_57367520	1.17055	FOXA2.p3	BC043338|C3|12266|complement component 3	K02782|C3|12266|complement component 3
mm9_v1_chr5_+_88314719_88314719	1.16378	FOXA2.p3	EF113909|Odam|69592|odontogenic, ameloblast asssociated	NM_027128|Odam|69592|odontogenic, ameloblast asssociated
mm9_v1_chr11_-_86171026_86171057	1.15959	FOXA2.p3	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr1_-_80210403_80210518	1.15784	FOXA2.p3	BC150872|Fam124b|241128|family with sequence similarity 124, member B	AK043867|Fam124b|241128|family with sequence similarity 124, member B	NM_173425|Fam124b|241128|family with sequence similarity 124, member B
mm9_v1_chr15_+_28133520_28133520	1.15759	FOXA2.p3	AF466704|Dnahc5|110082|dynein, axonemal, heavy chain 5	AK054152|Dnahc5|110082|dynein, axonemal, heavy chain 5	NM_133365|Dnahc5|110082|dynein, axonemal, heavy chain 5
mm9_v1_chr3_-_27052733_27052775	1.15262	FOXA2.p3	AK040174|Ect2|13605|ect2 oncogene	BC045614|Ect2|13605|ect2 oncogene	BC025565|Ect2|13605|ect2 oncogene	BC032155|Ect2|13605|ect2 oncogene	BC023881|Ect2|13605|ect2 oncogene	AK157718|Ect2|13605|ect2 oncogene	L11316|Ect2|13605|ect2 oncogene	AK220452|Ect2|13605|ect2 oncogene	NM_001177625|Ect2|13605|ect2 oncogene	NM_007900|Ect2|13605|ect2 oncogene
mm9_v1_chr5_+_43907004_43907024	1.14521	FOXA2.p3	AK078818|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr9_-_51771451_51771665	1.14166	FOXA2.p3	BC099518|Fdx1|14148|ferredoxin 1	BC132173|Fdx1|14148|ferredoxin 1	BC132175|Fdx1|14148|ferredoxin 1	D43690|Fdx1|14148|ferredoxin 1	D43689|Fdx1|14148|ferredoxin 1	NM_007996|Fdx1|14148|ferredoxin 1	L29123|Fdx1|14148|ferredoxin 1	AK004879|Fdx1|14148|ferredoxin 1	AK148115|Fdx1|14148|ferredoxin 1
mm9_v1_chr7_-_52921617_52921763	1.13244	FOXA2.p3	BC138534|Fut2|14344|fucosyltransferase 2	BC145831|Fut2|14344|fucosyltransferase 2	AK033520|Fut2|14344|fucosyltransferase 2	NM_018876|Fut2|14344|fucosyltransferase 2	AK033586|Fut2|14344|fucosyltransferase 2
mm9_v1_chr19_+_34625183_34625183	1.13195	FOXA2.p3	NM_008332|Ifit2|15958|interferon-induced protein with tetratricopeptide repeats 2
mm9_v1_chr2_-_155979971_155980032	1.12975	FOXA2.p3	AK046526|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr6_-_129225348_129225390	1.12849	FOXA2.p3	BC139135|Cd69|12515|CD69 antigen	BC139136|Cd69|12515|CD69 antigen	BC106997|Cd69|12515|CD69 antigen	BC128272|Cd69|12515|CD69 antigen	BC128273|Cd69|12515|CD69 antigen	AK017979|Cd69|12515|CD69 antigen	AK151076|Cd69|12515|CD69 antigen	AK153224|Cd69|12515|CD69 antigen	AK171645|Cd69|12515|CD69 antigen	NM_001033122|Cd69|12515|CD69 antigen
mm9_v1_chr6_+_141578016_141578059	1.12732	FOXA2.p3	AB031959|Slco1b2|28253|solute carrier organic anion transporter family, member 1b2	NM_020495|Slco1b2|28253|solute carrier organic anion transporter family, member 1b2
mm9_v1_chr12_-_77896481_77896489	1.12511	FOXA2.p3	BC066825|Gpx2|14776|glutathione peroxidase 2	BC039658|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr14_-_59761715_59761729	1.12221	FOXA2.p3	AK015075|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	AK006084|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	AK007313|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	BC049552|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	NM_026461|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene
mm9_v1_chr11_-_43714689_43714740	1.11983	FOXA2.p3	BC037002|Adra1b|11548|adrenergic receptor, alpha 1b	AK004891|Adra1b|11548|adrenergic receptor, alpha 1b	BC018330|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr1_+_190086716_190086716	1.11502	FOXA2.p3	NM_021408|Ush2a|22283|Usher syndrome 2A (autosomal recessive, mild) homolog (human)
mm9_v1_chr10_+_111497244_111497244	1.10901	FOXA2.p3	AK005860|Glipr1l1|69286|GLI pathogenesis-related 1 like 1	NM_027018|Glipr1l1|69286|GLI pathogenesis-related 1 like 1
mm9_v1_chr10_+_99798309_99798309	1.10701	FOXA2.p3	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr11_+_83251195_83251208	1.10339	FOXA2.p3	AK006174|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	NM_025492|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	AK005809|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	BC152320|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene
mm9_v1_chr11_+_84984593_84984597	1.10266	FOXA2.p3	BC048674|1700125H20Rik|73634|RIKEN cDNA 1700125H20 gene	NM_028589|1700125H20Rik|73634|RIKEN cDNA 1700125H20 gene
mm9_v1_chr9_-_107612238_107612349	1.10235	FOXA2.p3	AK140340|Sema3f|20350|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
mm9_v1_chr3_+_89862664_89862687	1.09965	FOXA2.p3	BC022598|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr4_-_155424925_155424925	1.09717	FOXA2.p3	AK133079|Ttll10|330010|tubulin tyrosine ligase-like family, member 10	NM_029264|Ttll10|330010|tubulin tyrosine ligase-like family, member 10
mm9_v1_chr14_-_111154292_111154370	1.09665	FOXA2.p3	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chr1_+_193801253_193801416	1.09478	FOXA2.p3	BC017602|Rd3|74023|retinal degeneration 3	NM_001177900|Rd3|74023|retinal degeneration 3	NM_023727|Rd3|74023|retinal degeneration 3	AK045045|Rd3|74023|retinal degeneration 3	AB030195|Rd3|74023|retinal degeneration 3	BC103778|Rd3|74023|retinal degeneration 3	AK014383|Rd3|74023|retinal degeneration 3	BC116937|Rd3|74023|retinal degeneration 3	BC116935|Rd3|74023|retinal degeneration 3
mm9_v1_chr12_-_85791928_85791966	1.09333	FOXA2.p3	AK128924|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK169915|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171896|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK155814|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK170305|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK082790|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK147146|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171581|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr7_-_91827857_91827907	1.08884	FOXA2.p3	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr4_+_115845976_115845999	1.07801	FOXA2.p3	AK006685|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	NM_001099295|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	AK018884|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene
mm9_v1_chr9_+_74696269_74696406	1.07504	FOXA2.p3	AK050237|Onecut1|15379|one cut domain, family member 1	AK051235|Onecut1|15379|one cut domain, family member 1	BC023444|Onecut1|15379|one cut domain, family member 1
mm9_v1_chr2_+_153968612_153968634	1.07201	FOXA2.p3	NM_011126|Plunc|18843|palate, lung, and nasal epithelium associated	U69172|Plunc|18843|palate, lung, and nasal epithelium associated	BC054375|Plunc|18843|palate, lung, and nasal epithelium associated
mm9_v1_chr19_-_32061015_32061042	1.0712	FOXA2.p3	AK135485|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr2_-_66622823_66622970	1.06834	FOXA2.p3	BC145273|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	NM_009135|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	AK142964|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr9_-_110379093_110379197	1.06693	FOXA2.p3	BC065167|Klhl18|270201|kelch-like 18 (Drosophila)	BC025563|Klhl18|270201|kelch-like 18 (Drosophila)	AK173029|Klhl18|270201|kelch-like 18 (Drosophila)	NM_177771|Klhl18|270201|kelch-like 18 (Drosophila)
mm9_v1_chr2_-_25089722_25089726	1.06334	FOXA2.p3	AB054999|Slc34a3|142681|solute carrier family 34 (sodium phosphate), member 3	NM_080854|Slc34a3|142681|solute carrier family 34 (sodium phosphate), member 3
mm9_v1_chr9_-_44152242_44152310	1.06199	FOXA2.p3	AK153884|Hmbs|15288|hydroxymethylbilane synthase	BC003861|Hmbs|15288|hydroxymethylbilane synthase	AK167702|Hmbs|15288|hydroxymethylbilane synthase	AK151020|Hmbs|15288|hydroxymethylbilane synthase	NM_013551|Hmbs|15288|hydroxymethylbilane synthase
mm9_v1_chr4_+_138528806_138528823	1.06169	FOXA2.p3	AK014571|Tmco4|77056|transmembrane and coiled-coil domains 4	AK029092|Tmco4|77056|transmembrane and coiled-coil domains 4	NM_029857|Tmco4|77056|transmembrane and coiled-coil domains 4	AK054337|Tmco4|77056|transmembrane and coiled-coil domains 4
mm9_v1_chr9_-_20699140_20699152	1.06167	FOXA2.p3	AK214405|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G
mm9_v1_chr3_-_10301182_10301182	1.06157	FOXA2.p3	BC030910|Fabp12|75497|fatty acid binding protein 12	NM_029310|Fabp12|75497|fatty acid binding protein 12
mm9_v1_chr11_-_99520272_99520272	1.06152	FOXA2.p3	NM_001126320|Gm11563|100040248|predicted gene 11563
mm9_v1_chr8_+_90806890_90806890	1.06143	FOXA2.p3	AK155646|Adcy7|11513|adenylate cyclase 7	NM_001109756|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr19_+_34175422_34175462	1.0578	FOXA2.p3	AK019504|Lipm|78753|lipase, family member M	AK037091|Lipm|78753|lipase, family member M	NM_023903|Lipm|78753|lipase, family member M	AK037214|Lipm|78753|lipase, family member M	AK085719|Lipm|78753|lipase, family member M	BC031933|Lipm|78753|lipase, family member M
mm9_v1_chr11_+_78312784_78312851	1.05714	FOXA2.p3	X63003|Vtn|22370|vitronectin	BC012690|Vtn|22370|vitronectin	AF440693|Vtn|22370|vitronectin	M77123|Vtn|22370|vitronectin
mm9_v1_chr2_-_94104877_94104914	1.05264	FOXA2.p3	AK140370|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene	AK089118|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene
mm9_v1_chr4_-_87452140_87452217	1.05179	FOXA2.p3	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr15_+_100959358_100959377	1.04949	FOXA2.p3	Z31664|Acvrl1|11482|activin A receptor, type II-like 1
mm9_v1_chr2_-_87332571_87332574	1.04061	FOXA2.p3	BC052825|Pramel7|347712|preferentially expressed antigen in melanoma like 7	AF490343|Pramel7|347712|preferentially expressed antigen in melanoma like 7	NM_178250|Pramel7|347712|preferentially expressed antigen in melanoma like 7
mm9_v1_chr16_-_17561311_17561339	1.03593	FOXA2.p3	AK143245|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK039092|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115678|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115679|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK132588|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK161226|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_001145435|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_029053|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene
mm9_v1_chr16_-_35313780_35313815	1.03196	FOXA2.p3	AK085223|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK164647|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)
mm9_v1_chr9_+_88851757_88851833	1.0312	FOXA2.p3	L16462|Bcl2a1a|12044|B-cell leukemia/lymphoma 2 related protein A1a	NM_009742|Bcl2a1a|12044|B-cell leukemia/lymphoma 2 related protein A1a
mm9_v1_chr19_+_40066913_40066929	1.02917	FOXA2.p3	AK005017|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	NM_010001|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	BC057912|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	AF047542|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37
mm9_v1_chr12_-_105228099_105228168	1.02251	FOXA2.p3	BC096585|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	BC024087|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	AK149420|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	NM_199314|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	BC096459|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	NM_001166350|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
mm9_v1_chr6_+_60894310_60894310	1.02243	FOXA2.p3	NM_001163507|Mmrn1|70945|multimerin 1	NM_027613|Mmrn1|70945|multimerin 1
mm9_v1_chr11_+_98487673_98487673	1.01837	FOXA2.p3	AY679090|Gsdma3|450219|gasdermin A3	NM_001007461|Gsdma3|450219|gasdermin A3
mm9_v1_chrX_+_137457727_137457737	1.01546	FOXA2.p3	AK006862|Vsig1|78789|V-set and immunoglobulin domain containing 1	NM_026103|Vsig1|78789|V-set and immunoglobulin domain containing 1	AK006251|Vsig1|78789|V-set and immunoglobulin domain containing 1	BC048589|Vsig1|78789|V-set and immunoglobulin domain containing 1
mm9_v1_chr5_-_146345586_146345608	1.01535	FOXA2.p3	AB033414|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A	NM_001105159|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	NM_017396|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A
mm9_v1_chr19_-_12840121_12840121	1.01295	FOXA2.p3	BC027539|Cntf|12803|ciliary neurotrophic factor	NM_170786|Cntf|12803|ciliary neurotrophic factor
mm9_v1_chr6_-_124838150_124838229	1.01214	FOXA2.p3	AK161775|Cd4|12504|CD4 antigen	BC039137|Cd4|12504|CD4 antigen	AK040115|Cd4|12504|CD4 antigen	AK153707|Cd4|12504|CD4 antigen	AK153966|Cd4|12504|CD4 antigen	NM_013488|Cd4|12504|CD4 antigen	X04836|Cd4|12504|CD4 antigen
mm9_v1_chr1_+_168060558_168060597	1.01199	FOXA2.p3	AK008784|Gpa33|59290|glycoprotein A33 (transmembrane)	AF247659|Gpa33|59290|glycoprotein A33 (transmembrane)	NM_021610|Gpa33|59290|glycoprotein A33 (transmembrane)	BC008528|Gpa33|59290|glycoprotein A33 (transmembrane)
mm9_v1_chr7_+_57014881_57014926	1.01165	FOXA2.p3	NM_001146052|Htatip2|53415|HIV-1 tat interactive protein 2, homolog (human)	AK008630|Htatip2|53415|HIV-1 tat interactive protein 2, homolog (human)	BC017372|Htatip2|53415|HIV-1 tat interactive protein 2, homolog (human)
mm9_v1_chr16_-_76288569_76288581	1.00737	FOXA2.p3	BC062260|Nrip1|268903|nuclear receptor interacting protein 1
mm9_v1_chr1_-_172018982_172019074	1.00733	FOXA2.p3	AK196844|Ddr2|18214|discoidin domain receptor family, member 2	NM_022563|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr9_-_69608633_69608746	1.00692	FOXA2.p3	X92592|Foxb1|64290|forkhead box B1	U04198|Foxb1|64290|forkhead box B1	U90538|Foxb1|64290|forkhead box B1	NM_022378|Foxb1|64290|forkhead box B1
mm9_v1_chr7_+_110565209_110565209	1.00594	FOXA2.p3	NM_010089|Usp17l5|13532|ubiquitin specific peptidase 17-like 5	U70369|Usp17l5|13532|ubiquitin specific peptidase 17-like 5
mm9_v1_chr19_+_12752655_12752655	0.998207	FOXA2.p3	BC065104|Olfr1443|258693|olfactory receptor 1443	NM_146698|Olfr1443|258693|olfactory receptor 1443
mm9_v1_chr7_-_149415875_149415881	0.99789	FOXA2.p3	BC111113|Krtap5-5|114666|keratin associated protein 5-5	NM_001037822|Krtap5-5|114666|keratin associated protein 5-5	AK020690|Krtap5-5|114666|keratin associated protein 5-5
mm9_v1_chr5_-_75440586_75440675	0.99675	FOXA2.p3	BC048435|Chic2|74277|cysteine-rich hydrophobic domain 2	AK172289|Chic2|74277|cysteine-rich hydrophobic domain 2	AK006962|Chic2|74277|cysteine-rich hydrophobic domain 2	NM_028850|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr19_-_11271212_11271226	0.995429	FOXA2.p3	BC089483|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13	NM_198224|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13	AF544402|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13	AK006841|Ms4a13|73466|membrane-spanning 4-domains, subfamily A, member 13
mm9_v1_chr14_-_56262087_56262223	0.989948	FOXA2.p3	AF269152|Tm9sf1|74140|transmembrane 9 superfamily member 1	BC017617|Tm9sf1|74140|transmembrane 9 superfamily member 1	AK160610|Tm9sf1|74140|transmembrane 9 superfamily member 1
mm9_v1_chr6_+_78375973_78375976	0.988606	FOXA2.p3	AK133506|Reg1|19692|regenerating islet-derived 1	AK160452|Reg1|19692|regenerating islet-derived 1	NM_009042|Reg1|19692|regenerating islet-derived 1
mm9_v1_chr1_-_196957694_196957780	0.987132	FOXA2.p3	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr1_+_135206360_135206408	0.986755	FOXA2.p3	AY707855|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	BC024448|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK002581|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK141378|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	NM_026680|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)
mm9_v1_chr4_-_155237442_155237470	0.982259	FOXA2.p3	AF311386|Tas1r3|83771|taste receptor, type 1, member 3	AY032621|Tas1r3|83771|taste receptor, type 1, member 3	AF337039|Tas1r3|83771|taste receptor, type 1, member 3	NM_031872|Tas1r3|83771|taste receptor, type 1, member 3	AB049994|Tas1r3|83771|taste receptor, type 1, member 3
mm9_v1_chr15_-_88564636_88564674	0.981168	FOXA2.p3	NM_001033274|Brd1|223770|bromodomain containing 1	AK149714|Brd1|223770|bromodomain containing 1
mm9_v1_chr13_+_49678115_49678143	0.980405	FOXA2.p3	AB007848|Omd|27047|osteomodulin	NM_012050|Omd|27047|osteomodulin	BC095997|Omd|27047|osteomodulin
mm9_v1_chr6_-_130336891_130336991	0.979083	FOXA2.p3	AY078436|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	NM_016659|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF419250|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF444273|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1
mm9_v1_chr11_+_76493274_76493413	0.978794	FOXA2.p3	AK048522|Tusc5|237858|tumor suppressor candidate 5	NM_177709|Tusc5|237858|tumor suppressor candidate 5	AK158395|Tusc5|237858|tumor suppressor candidate 5
mm9_v1_chr9_-_67680136_67680136	0.977974	FOXA2.p3	NM_001163143|C2cd4a|244911|C2 calcium-dependent domain containing 4A
mm9_v1_chr16_-_48772068_48772250	0.97663	FOXA2.p3	BC104350|Trat1|77647|T cell receptor associated transmembrane adaptor 1	BC104351|Trat1|77647|T cell receptor associated transmembrane adaptor 1	NM_198297|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AJ297969|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK138735|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK030807|Trat1|77647|T cell receptor associated transmembrane adaptor 1
mm9_v1_chr14_+_102237708_102237728	0.976542	FOXA2.p3	BC082553|Lmo7|380928|LIM domain only 7
mm9_v1_chr5_+_43993160_43993160	0.975364	FOXA2.p3	BC038308|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	DQ002400|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	NM_175425|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr15_+_99223377_99223451	0.975328	FOXA2.p3	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr6_-_129187965_129188001	0.972768	FOXA2.p3	AK030376|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene	AK009064|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene
mm9_v1_chr16_-_94591826_94592078	0.970834	FOXA2.p3	AF216308|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC061117|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159619|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159620|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216307|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr14_-_9091345_9091363	0.969402	FOXA2.p3	BC021339|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain	NM_001161667|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr6_+_29644178_29644255	0.967106	FOXA2.p3	AF276890|Tspan33|232670|tetraspanin 33	AK172176|Tspan33|232670|tetraspanin 33	AK004954|Tspan33|232670|tetraspanin 33	BC024685|Tspan33|232670|tetraspanin 33	NM_146173|Tspan33|232670|tetraspanin 33
mm9_v1_chr6_+_135015679_135015703	0.955312	FOXA2.p3	NM_181444|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A	BC039217|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A
mm9_v1_chrX_-_7248403_7248534	0.954591	FOXA2.p3	BC119088|Plp2|18824|proteolipid protein 2	BC119090|Plp2|18824|proteolipid protein 2	NM_019755|Plp2|18824|proteolipid protein 2	AB031292|Plp2|18824|proteolipid protein 2	BC092095|Plp2|18824|proteolipid protein 2	BC083078|Plp2|18824|proteolipid protein 2	AK011282|Plp2|18824|proteolipid protein 2	AK003522|Plp2|18824|proteolipid protein 2	AK154228|Plp2|18824|proteolipid protein 2	AK012816|Plp2|18824|proteolipid protein 2
mm9_v1_chrX_+_20374922_20374939	0.950266	FOXA2.p3	AK034861|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr7_-_88711829_88711866	0.949075	FOXA2.p3	AK036674|Fsd2|244091|fibronectin type III and SPRY domain containing 2	AK028142|Fsd2|244091|fibronectin type III and SPRY domain containing 2	NM_172904|Fsd2|244091|fibronectin type III and SPRY domain containing 2
mm9_v1_chr18_+_70632198_70632319	0.94737	FOXA2.p3	AK014759|Stard6|170461|StAR-related lipid transfer (START) domain containing 6	NM_029019|Stard6|170461|StAR-related lipid transfer (START) domain containing 6	BC087893|Stard6|170461|StAR-related lipid transfer (START) domain containing 6	AK016984|Stard6|170461|StAR-related lipid transfer (START) domain containing 6	AK005873|Stard6|170461|StAR-related lipid transfer (START) domain containing 6
mm9_v1_chrX_-_30292985_30293030	0.947044	FOXA2.p3	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr17_-_26017802_26017802	0.945188	FOXA2.p3	NM_001100454|Wfikkn1|215001|WAP, FS, Ig, KU, and NTR-containing protein 1
mm9_v1_chr5_-_72692122_72692149	0.941191	FOXA2.p3	AK005572|Corin|53419|corin
mm9_v1_chr6_+_24683244_24683306	0.941153	FOXA2.p3	AK016575|Hyal6|74409|hyaluronoglucosaminidase 6	AK030190|Hyal6|74409|hyaluronoglucosaminidase 6	NM_028920|Hyal6|74409|hyaluronoglucosaminidase 6	AK029715|Hyal6|74409|hyaluronoglucosaminidase 6	BC151178|Hyal6|74409|hyaluronoglucosaminidase 6	BC151179|Hyal6|74409|hyaluronoglucosaminidase 6
mm9_v1_chr6_+_59158860_59158986	0.927097	FOXA2.p3	NM_001081145|Tigd2|68140|tigger transposable element derived 2	AK019456|Tigd2|68140|tigger transposable element derived 2	AK005391|Tigd2|68140|tigger transposable element derived 2
mm9_v1_chr9_+_118415358_118415568	0.92684	FOXA2.p3	AK161568|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AK172292|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC037641|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AF051357|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC003268|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC096467|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	NM_018748|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC023102|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC057561|Golga4|54214|golgi autoantigen, golgin subfamily a, 4
mm9_v1_chr2_+_31071798_31071895	0.920196	FOXA2.p3	AK200289|Gpr107|277463|G protein-coupled receptor 107
mm9_v1_chrX_-_9046362_9046456	0.917599	FOXA2.p3	U43384|Cybb|13058|cytochrome b-245, beta polypeptide	AK033570|Cybb|13058|cytochrome b-245, beta polypeptide	AK053920|Cybb|13058|cytochrome b-245, beta polypeptide	AK079926|Cybb|13058|cytochrome b-245, beta polypeptide	BC071229|Cybb|13058|cytochrome b-245, beta polypeptide	BC042838|Cybb|13058|cytochrome b-245, beta polypeptide	AK152257|Cybb|13058|cytochrome b-245, beta polypeptide	AK153154|Cybb|13058|cytochrome b-245, beta polypeptide	AK153259|Cybb|13058|cytochrome b-245, beta polypeptide	AK171526|Cybb|13058|cytochrome b-245, beta polypeptide	FJ168469|Cybb|13058|cytochrome b-245, beta polypeptide	AK154126|Cybb|13058|cytochrome b-245, beta polypeptide	NM_007807|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr13_-_4149873_4149891	0.917438	FOXA2.p3	BC034259|Akr1c18|105349|aldo-keto reductase family 1, member C18	AB059565|Akr1c18|105349|aldo-keto reductase family 1, member C18	NM_134066|Akr1c18|105349|aldo-keto reductase family 1, member C18	AK153898|Akr1c18|105349|aldo-keto reductase family 1, member C18
mm9_v1_chr5_+_93238413_93238466	0.915837	FOXA2.p3	NM_001077595|Shroom3|27428|shroom family member 3	AK164918|Shroom3|27428|shroom family member 3	AF199422|Shroom3|27428|shroom family member 3
mm9_v1_chr10_+_77060408_77060810	0.915255	FOXA2.p3	AK177209|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK190939|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK200019|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK204685|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK217718|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK190184|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK216585|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK191037|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK192116|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK202715|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK209759|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK211153|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK216317|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein
mm9_v1_chr2_-_148269170_148269322	0.912391	FOXA2.p3	AK155060|Cd93|17064|CD93 antigen	AK079060|Cd93|17064|CD93 antigen	NM_010740|Cd93|17064|CD93 antigen	AF081789|Cd93|17064|CD93 antigen	AK028485|Cd93|17064|CD93 antigen
mm9_v1_chr13_+_93124680_93124737	0.911785	FOXA2.p3	AK136212|Dhfr|13361|dihydrofolate reductase	NM_010049|Dhfr|13361|dihydrofolate reductase
mm9_v1_chr11_+_42963378_42963378	0.909761	FOXA2.p3	AK033531|Atp10b|319767|ATPase, class V, type 10B	NM_176999|Atp10b|319767|ATPase, class V, type 10B
mm9_v1_chr2_-_153696733_153696819	0.90492	FOXA2.p3	FJ667498|Sun5|76407|Sad1 and UNC84 domain containing 5	AK006225|Sun5|76407|Sad1 and UNC84 domain containing 5	AY307077|Sun5|76407|Sad1 and UNC84 domain containing 5	NM_029599|Sun5|76407|Sad1 and UNC84 domain containing 5
mm9_v1_chr2_+_110561733_110561771	0.904729	FOXA2.p3	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr10_+_99803471_99803471	0.902711	FOXA2.p3	BC158090|Gm4303|100043231|predicted gene 4303	NM_001166638|Gm4303|100043231|predicted gene 4303	NM_001166639|Gm4305|100043235|predicted gene 4305	NM_001166641|Gm4307|100043239|predicted gene 4307
mm9_v1_chr6_-_130183339_130183339	0.902404	FOXA2.p3	NM_001110323|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10093|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10095|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chr17_+_72022808_72022818	0.900111	FOXA2.p3	AK158647|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr19_-_36700493_36700513	0.897908	FOXA2.p3	AK149600|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene	AK149390|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene
mm9_v1_chr10_+_11063201_11063297	0.891329	FOXA2.p3	AF124044|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	AK155519|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	NM_010146|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	AK041609|Epm2a|13853|epilepsy, progressive myoclonic epilepsy, type 2 gene alpha
mm9_v1_chr9_-_15105864_15105946	0.889413	FOXA2.p3	CT010296|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC011540|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC025213|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr8_-_3854285_3854307	0.888415	FOXA2.p3	AF373412|Cd209e|170780|CD209e antigen	BC107188|Cd209e|170780|CD209e antigen	BC107189|Cd209e|170780|CD209e antigen	NM_130905|Cd209e|170780|CD209e antigen	AK040917|Cd209e|170780|CD209e antigen
mm9_v1_chr5_-_146345525_146345567	0.880428	FOXA2.p3	BC138084|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	BC138083|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B
mm9_v1_chr4_-_58021900_58021995	0.88026	FOXA2.p3	AY495589|Txndc8|67402|thioredoxin domain containing 8	BC049564|Txndc8|67402|thioredoxin domain containing 8	AK006683|Txndc8|67402|thioredoxin domain containing 8	AK015240|Txndc8|67402|thioredoxin domain containing 8	BC116763|Txndc8|67402|thioredoxin domain containing 8	BC116765|Txndc8|67402|thioredoxin domain containing 8	BC144839|Txndc8|67402|thioredoxin domain containing 8	BC144840|Txndc8|67402|thioredoxin domain containing 8	NM_026132|Txndc8|67402|thioredoxin domain containing 8
mm9_v1_chr11_+_96184439_96184443	0.875894	FOXA2.p3	NM_001079869|Hoxb3|15410|homeobox B3	S35738|Hoxb3|15410|homeobox B3
mm9_v1_chr11_-_83392109_83392117	0.875703	FOXA2.p3	U15209|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr15_+_59480204_59480213	0.875082	FOXA2.p3	AK033358|Trib1|211770|tribbles homolog 1 (Drosophila)	AK028626|Trib1|211770|tribbles homolog 1 (Drosophila)	AK040738|Trib1|211770|tribbles homolog 1 (Drosophila)	AK041212|Trib1|211770|tribbles homolog 1 (Drosophila)	AK162876|Trib1|211770|tribbles homolog 1 (Drosophila)	NM_144549|Trib1|211770|tribbles homolog 1 (Drosophila)
mm9_v1_chrX_+_17722982_17722995	0.869118	FOXA2.p3	AK007061|Dusp21|73547|dual specificity phosphatase 21	BC048605|Dusp21|73547|dual specificity phosphatase 21	NM_028568|Dusp21|73547|dual specificity phosphatase 21
mm9_v1_chr4_+_100151471_100151479	0.865493	FOXA2.p3	AK133379|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	NM_001033773|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150880|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150888|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC172031|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)
mm9_v1_chr9_-_36540210_36540345	0.864031	FOXA2.p3	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr5_+_33760994_33761117	0.857422	FOXA2.p3	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr8_+_35178083_35178147	0.857308	FOXA2.p3	EU721729|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	NM_001126314|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147844|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147849|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	EU518496|Mboat4|234155|membrane bound O-acyltransferase domain containing 4
mm9_v1_chr10_-_99845190_99845193	0.85692	FOXA2.p3	BC158090|Gm4303|100043231|predicted gene 4303	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chr3_+_142193286_142193339	0.843114	FOXA2.p3	NM_001083312|Gbp6|229900|guanylate binding protein 6	AK036666|Gbp6|229900|guanylate binding protein 6	AK087751|Gbp6|229900|guanylate binding protein 6	NM_145545|Gbp6|229900|guanylate binding protein 6	BC010229|Gbp6|229900|guanylate binding protein 6
mm9_v1_chr10_+_111520409_111520427	0.842742	FOXA2.p3	AK014846|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK161292|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	BC118017|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	NM_026223|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK015834|Glipr1l2|67537|GLI pathogenesis-related 1 like 2
mm9_v1_chr18_+_61265225_61265605	0.842641	FOXA2.p3	AK146069|Csf1r|12978|colony stimulating factor 1 receptor	NM_001037859|Csf1r|12978|colony stimulating factor 1 receptor	BC066863|Csf1r|12978|colony stimulating factor 1 receptor	BC050024|Csf1r|12978|colony stimulating factor 1 receptor	AK171241|Csf1r|12978|colony stimulating factor 1 receptor	AK156550|Csf1r|12978|colony stimulating factor 1 receptor	AK155565|Csf1r|12978|colony stimulating factor 1 receptor	AK155488|Csf1r|12978|colony stimulating factor 1 receptor	AK079247|Csf1r|12978|colony stimulating factor 1 receptor	AK155576|Csf1r|12978|colony stimulating factor 1 receptor	AK155858|Csf1r|12978|colony stimulating factor 1 receptor	AK154128|Csf1r|12978|colony stimulating factor 1 receptor	AK155640|Csf1r|12978|colony stimulating factor 1 receptor	AK155654|Csf1r|12978|colony stimulating factor 1 receptor	AK171386|Csf1r|12978|colony stimulating factor 1 receptor	AK004947|Csf1r|12978|colony stimulating factor 1 receptor	AK154556|Csf1r|12978|colony stimulating factor 1 receptor	AK154653|Csf1r|12978|colony stimulating factor 1 receptor	AK154699|Csf1r|12978|colony stimulating factor 1 receptor	AK076215|Csf1r|12978|colony stimulating factor 1 receptor	AK143545|Csf1r|12978|colony stimulating factor 1 receptor	X06368|Csf1r|12978|colony stimulating factor 1 receptor	X68932|Csf1r|12978|colony stimulating factor 1 receptor	AK080326|Csf1r|12978|colony stimulating factor 1 receptor	BC043054|Csf1r|12978|colony stimulating factor 1 receptor	AK089498|Csf1r|12978|colony stimulating factor 1 receptor	AK171543|Csf1r|12978|colony stimulating factor 1 receptor	BC036343|Csf1r|12978|colony stimulating factor 1 receptor	AK041299|Csf1r|12978|colony stimulating factor 1 receptor
mm9_v1_chr5_+_88354611_88354672	0.840444	FOXA2.p3	AK021350|Csn3|12994|casein kappa	AK085710|Csn3|12994|casein kappa	AK164788|Csn3|12994|casein kappa	BC005653|Csn3|12994|casein kappa	BC035443|Csn3|12994|casein kappa	BC049949|Csn3|12994|casein kappa	BC004601|Csn3|12994|casein kappa	BC050269|Csn3|12994|casein kappa	AK142607|Csn3|12994|casein kappa	NM_007786|Csn3|12994|casein kappa	AK142673|Csn3|12994|casein kappa	M10114|Csn3|12994|casein kappa
mm9_v1_chr6_+_122407245_122407359	0.838142	FOXA2.p3	AK159742|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr16_+_20611637_20611755	0.838034	FOXA2.p3	AK007407|Ece2|107522|endothelin converting enzyme 2	AK007791|Ece2|107522|endothelin converting enzyme 2	BC115541|Ece2|107522|endothelin converting enzyme 2	BC115542|Ece2|107522|endothelin converting enzyme 2	NM_025462|Ece2|107522|endothelin converting enzyme 2	NM_177940|Ece2|107522|endothelin converting enzyme 2	NM_177941|Ece2|107522|endothelin converting enzyme 2
mm9_v1_chr1_-_38014596_38014603	0.832934	FOXA2.p3	BC119394|Lyg1|69541|lysozyme G-like 1	BC119396|Lyg1|69541|lysozyme G-like 1	AK009014|Lyg1|69541|lysozyme G-like 1	NM_027111|Lyg1|69541|lysozyme G-like 1
mm9_v1_chr1_-_4350323_4350394	0.830329	FOXA2.p3	BC038794|Rp1|19888|retinitis pigmentosa 1 (human)	BC120927|Rp1|19888|retinitis pigmentosa 1 (human)	BC120928|Rp1|19888|retinitis pigmentosa 1 (human)	AF155141|Rp1|19888|retinitis pigmentosa 1 (human)	AK044413|Rp1|19888|retinitis pigmentosa 1 (human)	BC096607|Rp1|19888|retinitis pigmentosa 1 (human)	NM_011283|Rp1|19888|retinitis pigmentosa 1 (human)
mm9_v1_chr3_+_40512792_40512804	0.830168	FOXA2.p3	AK006599|Slc25a31|73333|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31	AK132722|Slc25a31|73333|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31	NM_178386|Slc25a31|73333|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
mm9_v1_chr2_+_17986187_17986431	0.827537	FOXA2.p3	AK154320|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC055298|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK147388|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC069988|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF010135|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK220504|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK045042|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr2_+_155576833_155576871	0.827117	FOXA2.p3	AK143719|Procr|19124|protein C receptor, endothelial
mm9_v1_chr10_+_99829132_99829132	0.826887	FOXA2.p3	BC147487|Gm4312|100043247|predicted gene 4312	NM_001166636|Gm4312|100043247|predicted gene 4312	NM_001166637|Gm4301|100043224|predicted gene 4301
mm9_v1_chrX_-_31350951_31350996	0.818829	FOXA2.p3	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001099333|Gm2863|100040606|predicted gene 2863
mm9_v1_chr4_-_148524194_148524430	0.815278	FOXA2.p3	AK198787|Pgd|110208|phosphogluconate dehydrogenase	AK208960|Pgd|110208|phosphogluconate dehydrogenase
mm9_v1_chr2_+_34631438_34631582	0.810314	FOXA2.p3	AK218616|Hspa5|14828|heat shock protein 5	AK186478|Hspa5|14828|heat shock protein 5	AK192310|Hspa5|14828|heat shock protein 5
mm9_v1_chr1_+_179374783_179374796	0.808573	FOXA2.p3	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr14_+_32955237_32955242	0.807425	FOXA2.p3	U89840|Msmb|17695|beta-microseminoprotein
mm9_v1_chr8_+_95376459_95376726	0.802654	FOXA2.p3	AK193974|Mmp2|17390|matrix metallopeptidase 2	AK197255|Mmp2|17390|matrix metallopeptidase 2	AK200044|Mmp2|17390|matrix metallopeptidase 2	AK184503|Mmp2|17390|matrix metallopeptidase 2
mm9_v1_chr11_+_72420705_72421072	0.798946	FOXA2.p3	NM_025985|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	BC065083|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK083029|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK012539|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK013902|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK167472|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)	AK197264|Ube2g1|67128|ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)
mm9_v1_chr7_-_35070627_35070627	0.798718	FOXA2.p3	AK076994|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene	NM_172741|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr4_-_126114651_126114748	0.797707	FOXA2.p3	AK141219|Eif2c1|236511|eukaryotic translation initiation factor 2C, 1
mm9_v1_chr3_-_15426426_15426426	0.79659	FOXA2.p3	AB112022|Sirpb1a|320832|signal-regulatory protein beta 1A	NM_001002898|Sirpb1a|320832|signal-regulatory protein beta 1A
mm9_v1_chr11_+_83476085_83476138	0.795569	FOXA2.p3	NM_013652|Ccl4|20303|chemokine (C-C motif) ligand 4	AK089326|Ccl4|20303|chemokine (C-C motif) ligand 4	AK154685|Ccl4|20303|chemokine (C-C motif) ligand 4	AK155053|Ccl4|20303|chemokine (C-C motif) ligand 4	M23503|Ccl4|20303|chemokine (C-C motif) ligand 4	AK156948|Ccl4|20303|chemokine (C-C motif) ligand 4	AK172472|Ccl4|20303|chemokine (C-C motif) ligand 4	M35590|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128218|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128219|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119257|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119259|Ccl4|20303|chemokine (C-C motif) ligand 4
mm9_v1_chr4_-_96220030_96220248	0.795438	FOXA2.p3	AK180579|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK186838|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK193212|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK210777|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK078893|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK165663|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK038636|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6
mm9_v1_chrX_+_30977792_30977837	0.794925	FOXA2.p3	NM_001168337|Gm2825|100040533|predicted gene 2825	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr11_-_109689335_109689359	0.79431	FOXA2.p3	BC048675|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	BC099559|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	AK005888|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	AK160153|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	AK132924|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	NM_001162428|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene	NM_027038|1700012B07Rik|69324|RIKEN cDNA 1700012B07 gene
mm9_v1_chr3_+_108456817_108456934	0.792217	FOXA2.p3	NM_145543|Clcc1|229725|chloride channel CLIC-like 1	AK169803|Clcc1|229725|chloride channel CLIC-like 1	NM_001177771|Clcc1|229725|chloride channel CLIC-like 1	AK090092|Clcc1|229725|chloride channel CLIC-like 1	AK143631|Clcc1|229725|chloride channel CLIC-like 1	AK171296|Clcc1|229725|chloride channel CLIC-like 1	NM_001177770|Clcc1|229725|chloride channel CLIC-like 1	AK179081|Clcc1|229725|chloride channel CLIC-like 1
mm9_v1_chr2_+_121854287_121854425	0.791929	FOXA2.p3	AK148004|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK154934|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK161038|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	NM_144545|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	BC080788|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK147154|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK019219|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J
mm9_v1_chr17_-_46575337_46575389	0.789678	FOXA2.p3	AB069965|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026598|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026597|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC024119|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr3_-_51081421_51081435	0.789563	FOXA2.p3	AK088422|Elf2|69257|E74-like factor 2
mm9_v1_chr11_-_69362609_69362611	0.789091	FOXA2.p3	NM_001081330|Dnahc2|327954|dynein, axonemal, heavy chain 2	AK051796|Dnahc2|327954|dynein, axonemal, heavy chain 2
mm9_v1_chr7_-_25022472_25022616	0.788826	FOXA2.p3	AF167316|Zfp109|56869|zinc finger protein 109	NM_020262|Zfp109|56869|zinc finger protein 109
mm9_v1_chr1_-_166865638_166865652	0.787617	FOXA2.p3	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr1_-_163181251_163181302	0.787576	FOXA2.p3	BC013489|Prdx6|11758|peroxiredoxin 6	AK172888|Prdx6|11758|peroxiredoxin 6	AF004670|Prdx6|11758|peroxiredoxin 6	AK168223|Prdx6|11758|peroxiredoxin 6	AK076191|Prdx6|11758|peroxiredoxin 6	AK035097|Prdx6|11758|peroxiredoxin 6	AK081980|Prdx6|11758|peroxiredoxin 6	AF093852|Prdx6|11758|peroxiredoxin 6	AK030413|Prdx6|11758|peroxiredoxin 6	AK161710|Prdx6|11758|peroxiredoxin 6	BC061181|Prdx6|11758|peroxiredoxin 6	NM_007453|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr2_-_128769687_128769755	0.786132	FOXA2.p3	BC048687|Zc3h8|57432|zinc finger CCCH type containing 8	AK132679|Zc3h8|57432|zinc finger CCCH type containing 8	AK164491|Zc3h8|57432|zinc finger CCCH type containing 8	AF061961|Zc3h8|57432|zinc finger CCCH type containing 8	AK021376|Zc3h8|57432|zinc finger CCCH type containing 8	NM_020594|Zc3h8|57432|zinc finger CCCH type containing 8
mm9_v1_chr7_-_108729674_108729685	0.784874	FOXA2.p3	AF016463|Art2b|11872|ADP-ribosyltransferase 2b	AF016465|Art2b|11872|ADP-ribosyltransferase 2b	NM_019915|Art2b|11872|ADP-ribosyltransferase 2b	X87612|Art2b|11872|ADP-ribosyltransferase 2b	S79913|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chr19_+_4006795_4006924	0.782634	FOXA2.p3	
mm9_v1_chr2_-_69180643_69180677	0.78012	FOXA2.p3	AF133903|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	AK144553|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_021022|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11
mm9_v1_chrX_+_146981989_146982012	0.778778	FOXA2.p3	AK002642|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165262|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M63244|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165257|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK172094|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M15268|Alas2|11656|aminolevulinic acid synthase 2, erythroid	BC150870|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr9_-_51137021_51137021	0.776964	FOXA2.p3	AK007796|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene	NM_027217|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene
mm9_v1_chr3_+_146162954_146162967	0.77336	FOXA2.p3	AK204635|Gng5|14707|guanine nucleotide binding protein (G protein), gamma 5
mm9_v1_chr19_-_8293322_8293389	0.771661	FOXA2.p3	AF536196|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AK052597|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	BC126952|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	NM_172776|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AF536195|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene
mm9_v1_chr2_+_167363696_167363726	0.771415	FOXA2.p3	AK144478|Snai1|20613|snail homolog 1 (Drosophila)	BC034857|Snai1|20613|snail homolog 1 (Drosophila)	NM_011427|Snai1|20613|snail homolog 1 (Drosophila)
mm9_v1_chrX_-_31752420_31752465	0.769024	FOXA2.p3	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	NM_001145038|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr16_-_19983049_19983121	0.764305	FOXA2.p3	AY350736|Klhl6|239743|kelch-like 6 (Drosophila)	BC100568|Klhl6|239743|kelch-like 6 (Drosophila)	NM_183390|Klhl6|239743|kelch-like 6 (Drosophila)
mm9_v1_chr17_-_40931024_40931046	0.759201	FOXA2.p3	AK018856|Crisp2|22024|cysteine-rich secretory protein 2	M25533|Crisp2|22024|cysteine-rich secretory protein 2	NM_009420|Crisp2|22024|cysteine-rich secretory protein 2	BC049615|Crisp2|22024|cysteine-rich secretory protein 2
mm9_v1_chr8_-_107779002_107779023	0.758887	FOXA2.p3	BC108347|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	BC047209|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene
mm9_v1_chr9_+_92204214_92204235	0.757268	FOXA2.p3	AK132905|1700057G04Rik|78459|RIKEN cDNA 1700057G04 gene	NM_001033184|1700057G04Rik|78459|RIKEN cDNA 1700057G04 gene	AK018865|1700057G04Rik|78459|RIKEN cDNA 1700057G04 gene
mm9_v1_chr1_+_167391318_167391475	0.751916	FOXA2.p3	AK011889|Brp44|70456|brain protein 44	NM_027430|Brp44|70456|brain protein 44	AK151522|Brp44|70456|brain protein 44	AK002233|Brp44|70456|brain protein 44	AK008044|Brp44|70456|brain protein 44
mm9_v1_chr2_+_164159054_164159070	0.75109	FOXA2.p3	S60687|Svs5|20944|seminal vesicle secretory protein 5
mm9_v1_chr18_+_56748001_56748079	0.739887	FOXA2.p3	AK006893|1700065I17Rik|67343|RIKEN cDNA 1700065I17 gene	NM_026099|1700065I17Rik|67343|RIKEN cDNA 1700065I17 gene	AK018985|1700065I17Rik|67343|RIKEN cDNA 1700065I17 gene	BC099538|1700065I17Rik|67343|RIKEN cDNA 1700065I17 gene	FJ211594|1700065I17Rik|67343|RIKEN cDNA 1700065I17 gene	BC048449|1700065I17Rik|67343|RIKEN cDNA 1700065I17 gene	BC048448|1700065I17Rik|67343|RIKEN cDNA 1700065I17 gene
mm9_v1_chr4_+_135700717_135701086	0.734862	FOXA2.p3	AK014306|Id3|15903|inhibitor of DNA binding 3	AK201456|Id3|15903|inhibitor of DNA binding 3	AK192106|Id3|15903|inhibitor of DNA binding 3	AK192107|Id3|15903|inhibitor of DNA binding 3	AK192467|Id3|15903|inhibitor of DNA binding 3	AK199050|Id3|15903|inhibitor of DNA binding 3	AK200444|Id3|15903|inhibitor of DNA binding 3	AK202308|Id3|15903|inhibitor of DNA binding 3
mm9_v1_chr15_+_88919467_88919574	0.734754	FOXA2.p3	BC141293|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK088096|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK054432|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK161059|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	AK005048|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	BC117817|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	BC117818|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene	NM_027905|1300018J18Rik|223776|RIKEN cDNA 1300018J18 gene
mm9_v1_chr1_+_108068405_108068445	0.734199	FOXA2.p3	NM_133821|Phlpp1|98432|PH domain and leucine rich repeat protein phosphatase 1
mm9_v1_chr11_+_78279202_78279242	0.729417	FOXA2.p3	NM_026740|Slc46a1|52466|solute carrier family 46, member 1	AK170505|Slc46a1|52466|solute carrier family 46, member 1	BC057976|Slc46a1|52466|solute carrier family 46, member 1	AK003278|Slc46a1|52466|solute carrier family 46, member 1	AK220201|Slc46a1|52466|solute carrier family 46, member 1
mm9_v1_chr9_+_5308846_5308883	0.727888	FOXA2.p3	AK078836|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK138730|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK151547|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	BC061255|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	NM_007609|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK156667|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK160328|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK171877|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	U59463|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	Y13089|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase
mm9_v1_chr17_-_33783578_33783579	0.726981	FOXA2.p3	AK150477|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M
mm9_v1_chr6_-_43616140_43616276	0.726682	FOXA2.p3	BC023354|Tpk1|29807|thiamine pyrophosphokinase	AK052225|Tpk1|29807|thiamine pyrophosphokinase	AB027568|Tpk1|29807|thiamine pyrophosphokinase	AK035044|Tpk1|29807|thiamine pyrophosphokinase	AK136486|Tpk1|29807|thiamine pyrophosphokinase	NM_013861|Tpk1|29807|thiamine pyrophosphokinase	AK034521|Tpk1|29807|thiamine pyrophosphokinase	BC015246|Tpk1|29807|thiamine pyrophosphokinase	AK028431|Tpk1|29807|thiamine pyrophosphokinase	AK039131|Tpk1|29807|thiamine pyrophosphokinase	AK087844|Tpk1|29807|thiamine pyrophosphokinase
mm9_v1_chr8_+_4248213_4248213	0.7262	FOXA2.p3	NM_001195258|Gm14378|100044509|predicted gene 14378
mm9_v1_chr7_-_108704315_108704409	0.719121	FOXA2.p3	AF016462|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	AF016464|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	NM_007490|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	X52991|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	BC120753|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chr2_+_145760519_145760551	0.717653	FOXA2.p3	AK019712|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK038772|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	NM_175280|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK086391|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107030|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107031|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC057361|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC058733|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene
mm9_v1_chr10_+_61158282_61158320	0.716814	FOXA2.p3	AK154513|Tysnd1|71767|trypsin domain containing 1	BC119320|Tysnd1|71767|trypsin domain containing 1
mm9_v1_chr17_-_37727295_37727325	0.713945	FOXA2.p3	NM_146287|Olfr114|258284|olfactory receptor 114	BC132209|Olfr114|258284|olfactory receptor 114	BC132573|Olfr114|258284|olfactory receptor 114
mm9_v1_chr11_-_77707282_77707373	0.712358	FOXA2.p3	U94700|Pipox|19193|pipecolic acid oxidase	BC013525|Pipox|19193|pipecolic acid oxidase	AK135009|Pipox|19193|pipecolic acid oxidase	AK149488|Pipox|19193|pipecolic acid oxidase	AK008555|Pipox|19193|pipecolic acid oxidase	NM_008952|Pipox|19193|pipecolic acid oxidase
mm9_v1_chr12_+_32008372_32008419	0.712323	FOXA2.p3	AK141833|Lamb1|16777|laminin B1
mm9_v1_chr17_-_46575402_46575425	0.710832	FOXA2.p3	BC013474|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK143949|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK082865|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	NM_144856|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr1_+_78813482_78813523	0.709507	FOXA2.p3	AK133469|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	BC032920|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	BC034849|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	AF076533|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4	NM_021342|Kcne4|57814|potassium voltage-gated channel, Isk-related subfamily, gene 4
mm9_v1_chr1_-_58752798_58752832	0.70944	FOXA2.p3	AK077190|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK016678|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK133373|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	NM_175370|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)
mm9_v1_chr1_+_57831651_57831771	0.709237	FOXA2.p3	NM_144882|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK012791|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK019292|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK161988|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK031266|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	BC021879|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK032169|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr11_+_9091944_9091944	0.706533	FOXA2.p3	AK036546|Abca13|268379|ATP-binding cassette, sub-family A (ABC1), member 13	NM_178259|Abca13|268379|ATP-binding cassette, sub-family A (ABC1), member 13
mm9_v1_chrX_-_162948399_162948409	0.706213	FOXA2.p3	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr4_+_99322989_99322989	0.70495	FOXA2.p3	AF067421|Foxd3|15221|forkhead box D3	NM_010425|Foxd3|15221|forkhead box D3	U41047|Foxd3|15221|forkhead box D3
mm9_v1_chr3_-_27052794_27052801	0.703732	FOXA2.p3	NM_001177626|Ect2|13605|ect2 oncogene
mm9_v1_chr2_-_160698705_160698728	0.700271	FOXA2.p3	AK143296|Zhx3|320799|zinc fingers and homeoboxes 3	BC058111|Zhx3|320799|zinc fingers and homeoboxes 3	NM_177263|Zhx3|320799|zinc fingers and homeoboxes 3
mm9_v1_chr17_-_30729995_30730086	0.700196	FOXA2.p3	
mm9_v1_chr6_+_48696195_48696205	0.697592	FOXA2.p3	AB126961|Gimap5|317757|GTPase, IMAP family member 5	NM_175035|Gimap5|317757|GTPase, IMAP family member 5	AK087160|Gimap5|317757|GTPase, IMAP family member 5
mm9_v1_chr19_-_7877136_7877156	0.697196	FOXA2.p3	BC014805|BC014805|236149|cDNA sequence BC014805	NM_146232|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr12_-_32893074_32893513	0.69698	FOXA2.p3	BC051246|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137620|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146201|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AJ249280|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_020272|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137470|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK040543|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK132553|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146200|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide
mm9_v1_chr15_-_97662101_97662197	0.696742	FOXA2.p3	BC057332|Hdac7|56233|histone deacetylase 7	NM_019572|Hdac7|56233|histone deacetylase 7	AY943912|Hdac7|56233|histone deacetylase 7
mm9_v1_chr9_+_98197280_98197292	0.693752	FOXA2.p3	BC092086|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr9_-_109605196_109605213	0.690127	FOXA2.p3	AK162167|Fbxw18|546161|F-box and WD-40 domain protein 18	AK136230|Fbxw18|546161|F-box and WD-40 domain protein 18	BC139081|Fbxw18|546161|F-box and WD-40 domain protein 18	NM_001033794|Fbxw18|546161|F-box and WD-40 domain protein 18
mm9_v1_chr18_-_43952520_43952536	0.689786	FOXA2.p3	BC147098|Gm94|225443|predicted gene 94	BC147099|Gm94|225443|predicted gene 94	BC171995|Gm94|225443|predicted gene 94	AK131908|Gm94|225443|predicted gene 94	AK131907|Gm94|225443|predicted gene 94	NM_001033280|Gm94|225443|predicted gene 94
mm9_v1_chr1_+_6720087_6720131	0.688801	FOXA2.p3	AB097467|St18|240690|suppression of tumorigenicity 18	AJ536155|St18|240690|suppression of tumorigenicity 18	AK032557|St18|240690|suppression of tumorigenicity 18	NM_173868|St18|240690|suppression of tumorigenicity 18
mm9_v1_chr8_-_38001686_38001686	0.686957	FOXA2.p3	HM008381|Dlc1|50768|deleted in liver cancer 1	NM_001194940|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr9_+_77899730_77899780	0.686145	FOXA2.p3	D88612|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	U59876|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	BC066866|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	NM_008103|Gcm1|14531|glial cells missing homolog 1 (Drosophila)	AK142574|Gcm1|14531|glial cells missing homolog 1 (Drosophila)
mm9_v1_chr6_+_48696256_48696297	0.685303	FOXA2.p3	AK087249|Gimap5|317757|GTPase, IMAP family member 5	AK052694|Gimap5|317757|GTPase, IMAP family member 5	BC095995|Gimap5|317757|GTPase, IMAP family member 5	AK054194|Gimap5|317757|GTPase, IMAP family member 5
mm9_v1_chr3_+_102877936_102877949	0.683245	FOXA2.p3	NM_001033303|Ampd1|229665|adenosine monophosphate deaminase 1	AK137549|Ampd1|229665|adenosine monophosphate deaminase 1	AK132524|Ampd1|229665|adenosine monophosphate deaminase 1
mm9_v1_chr6_+_29383152_29383347	0.68192	FOXA2.p3	NM_001081185|Flnc|68794|filamin C, gamma	AK051985|Flnc|68794|filamin C, gamma	BC151097|Flnc|68794|filamin C, gamma	BC158128|Flnc|68794|filamin C, gamma	BC172159|Flnc|68794|filamin C, gamma
mm9_v1_chr2_+_127164374_127164374	0.681701	FOXA2.p3	AK033037|Astl|215095|astacin-like metalloendopeptidase (M12 family)	NM_172539|Astl|215095|astacin-like metalloendopeptidase (M12 family)
mm9_v1_chr11_-_4494790_4494809	0.681655	FOXA2.p3	BC032166|Mtmr3|74302|myotubularin related protein 3	AK141138|Mtmr3|74302|myotubularin related protein 3	BC081544|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr5_-_115421045_115421102	0.680165	FOXA2.p3	M57966|Hnf1a|21405|HNF1 homeobox A	BC080698|Hnf1a|21405|HNF1 homeobox A	NM_009327|Hnf1a|21405|HNF1 homeobox A	AK144051|Hnf1a|21405|HNF1 homeobox A	BC013454|Hnf1a|21405|HNF1 homeobox A
mm9_v1_chr11_+_106236139_106236139	0.680158	FOXA2.p3	AK153786|2310007L24Rik|75573|RIKEN cDNA 2310007L24 gene	NM_029345|2310007L24Rik|75573|RIKEN cDNA 2310007L24 gene
mm9_v1_chr10_+_97110043_97110069	0.679534	FOXA2.p3	AK137179|Epyc|13516|epiphycan	D78274|Epyc|13516|epiphycan
mm9_v1_chr7_-_114901489_114901545	0.670216	FOXA2.p3	BC107238|Cyb5r2|320635|cytochrome b5 reductase 2	BC107239|Cyb5r2|320635|cytochrome b5 reductase 2	AK085272|Cyb5r2|320635|cytochrome b5 reductase 2	NM_177216|Cyb5r2|320635|cytochrome b5 reductase 2	AK147952|Cyb5r2|320635|cytochrome b5 reductase 2
mm9_v1_chr5_-_83783923_83784219	0.670203	FOXA2.p3	AK052302|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AK052378|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AK052276|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	BC107366|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	BC107367|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AF548365|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	AK052284|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like	NM_153801|Tecrl|243078|trans-2,3-enoyl-CoA reductase-like
mm9_v1_chr1_+_6720153_6720223	0.669585	FOXA2.p3	AK133743|St18|240690|suppression of tumorigenicity 18	BC118528|St18|240690|suppression of tumorigenicity 18	AK137440|St18|240690|suppression of tumorigenicity 18	AK141513|St18|240690|suppression of tumorigenicity 18
mm9_v1_chr3_+_96049419_96049503	0.66957	FOXA2.p3	BC089519|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147778|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147781|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK002725|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK006728|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_013549|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC010564|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC053966|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC062255|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC080809|Hist2h3c1|15077|histone cluster 2, H3c1	Z30940|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_178212|Hist2h2aa2|319192|histone cluster 2, H2aa2
mm9_v1_chr6_+_116214215_116214252	0.669433	FOXA2.p3	AK089032|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)	NM_001081317|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)
mm9_v1_chr4_+_135051891_135051982	0.668758	FOXA2.p3	AK015061|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	AK019766|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	NM_030189|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	BC145657|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene
mm9_v1_chrX_+_30598310_30598355	0.667724	FOXA2.p3	NM_001168334|Gm2799|100040482|predicted gene 2799	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr11_+_69435553_69435610	0.666792	FOXA2.p3	AK011406|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	AK161230|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	BC061227|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	NM_026991|Sat2|69215|spermidine/spermine N1-acetyl transferase 2
mm9_v1_chr2_+_24200890_24200907	0.666572	FOXA2.p3	AK155641|Il1rn|16181|interleukin 1 receptor antagonist	NM_001039701|Il1rn|16181|interleukin 1 receptor antagonist	AK155888|Il1rn|16181|interleukin 1 receptor antagonist	AK157157|Il1rn|16181|interleukin 1 receptor antagonist	AK171385|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr5_+_139856534_139856673	0.660581	FOXA2.p3	AK155280|Gpr146|80290|G protein-coupled receptor 146	AK154478|Gpr146|80290|G protein-coupled receptor 146	AK046512|Gpr146|80290|G protein-coupled receptor 146	AK089232|Gpr146|80290|G protein-coupled receptor 146	AK154708|Gpr146|80290|G protein-coupled receptor 146	AK155876|Gpr146|80290|G protein-coupled receptor 146	NM_030258|Gpr146|80290|G protein-coupled receptor 146	BC003323|Gpr146|80290|G protein-coupled receptor 146	AK050034|Gpr146|80290|G protein-coupled receptor 146	AK087100|Gpr146|80290|G protein-coupled receptor 146	AK155212|Gpr146|80290|G protein-coupled receptor 146
mm9_v1_chr17_-_79306331_79306331	0.658548	FOXA2.p3	NM_001163625|Sult6b1|73671|sulfotransferase family, cytosolic, 6B, member 1
mm9_v1_chr14_+_48740583_48740614	0.658523	FOXA2.p3	AK082342|Peli2|93834|pellino 2	AF302504|Peli2|93834|pellino 2
mm9_v1_chr13_+_106233718_106234065	0.65754	FOXA2.p3	AK140194|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	NM_008308|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	AK049884|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	AK049814|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	BC138669|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A	BC138681|Htr1a|15550|5-hydroxytryptamine (serotonin) receptor 1A
mm9_v1_chrX_+_34894843_34894843	0.655737	FOXA2.p3	AJ972667|Rhox4c|434759|reproductive homeobox 4C	NM_001039689|Rhox4c|434759|reproductive homeobox 4C
mm9_v1_chr2_-_152223710_152223930	0.653871	FOXA2.p3	BC067019|Sox12|20667|SRY-box containing gene 12	NM_011438|Sox12|20667|SRY-box containing gene 12
mm9_v1_chr13_+_8202111_8202186	0.653323	FOXA2.p3	AK134964|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK051460|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK043249|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139079|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK139273|Adarb2|94191|adenosine deaminase, RNA-specific, B2	NM_052977|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC059822|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK046083|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK033916|Adarb2|94191|adenosine deaminase, RNA-specific, B2	AK045538|Adarb2|94191|adenosine deaminase, RNA-specific, B2	BC052426|Adarb2|94191|adenosine deaminase, RNA-specific, B2
mm9_v1_chr2_+_24008680_24008706	0.653028	FOXA2.p3	AK009787|Il1f8|69677|interleukin 1 family, member 8	BC119517|Il1f8|69677|interleukin 1 family, member 8	NM_027163|Il1f8|69677|interleukin 1 family, member 8	AY071842|Il1f8|69677|interleukin 1 family, member 8
mm9_v1_chr9_-_105999021_105999113	0.648972	FOXA2.p3	AM231151|Col6a4|68553|collagen, type VI, alpha 4	NM_026763|Col6a4|68553|collagen, type VI, alpha 4	AB370265|Col6a4|68553|collagen, type VI, alpha 4
mm9_v1_chr19_+_8692485_8692668	0.645763	FOXA2.p3	NM_008766|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	BC021647|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	U52842|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	AK035971|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6
mm9_v1_chr1_-_141273617_141273676	0.645664	FOXA2.p3	AF406641|Crb1|170788|crumbs homolog 1 (Drosophila)	AY450552|Crb1|170788|crumbs homolog 1 (Drosophila)	NM_133239|Crb1|170788|crumbs homolog 1 (Drosophila)	AF492496|Crb1|170788|crumbs homolog 1 (Drosophila)
mm9_v1_chrX_+_66015013_66015108	0.64473	FOXA2.p3	BC099411|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166619|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166620|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_174993|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC138087|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145139|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145140|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171922|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171923|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171947|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171948|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AK076190|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AY214130|Fmr1nb|207854|fragile X mental retardation 1 neighbor
mm9_v1_chrX_-_3667391_3667436	0.643965	FOXA2.p3	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr14_+_55082960_55083081	0.643674	FOXA2.p3	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chrX_-_71598873_71598966	0.642187	FOXA2.p3	AK134624|Lage3|66192|L antigen family, member 3	BC027305|Lage3|66192|L antigen family, member 3	AK004210|Lage3|66192|L antigen family, member 3	AK002539|Lage3|66192|L antigen family, member 3	NM_025410|Lage3|66192|L antigen family, member 3
mm9_v1_chrX_-_71618617_71618655	0.641568	FOXA2.p3	BC023050|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	AK041958|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr9_-_110892114_110892227	0.639622	FOXA2.p3	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr6_+_17699145_17699592	0.639467	FOXA2.p3	AK079107|St7|64213|suppression of tumorigenicity 7	AK132103|St7|64213|suppression of tumorigenicity 7	AK151550|St7|64213|suppression of tumorigenicity 7	NM_001083315|St7|64213|suppression of tumorigenicity 7	NM_022332|St7|64213|suppression of tumorigenicity 7	BC108418|St7|64213|suppression of tumorigenicity 7	AF234884|St7|64213|suppression of tumorigenicity 7	AF234885|St7|64213|suppression of tumorigenicity 7	AY007794|St7|64213|suppression of tumorigenicity 7	AY007795|St7|64213|suppression of tumorigenicity 7	AK036248|St7|64213|suppression of tumorigenicity 7	BC060630|St7|64213|suppression of tumorigenicity 7	BC051429|St7|64213|suppression of tumorigenicity 7	AY551821|St7|64213|suppression of tumorigenicity 7	AY551822|St7|64213|suppression of tumorigenicity 7	CT010245|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr16_-_85550617_85550674	0.636757	FOXA2.p3	BC099957|Cyyr1|224405|cysteine and tyrosine-rich protein 1	NM_144853|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK031840|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AY061854|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK171936|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK163137|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK158088|Cyyr1|224405|cysteine and tyrosine-rich protein 1
mm9_v1_chr11_-_110112926_110113089	0.636559	FOXA2.p3	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr3_+_62142698_62142868	0.632792	FOXA2.p3	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr9_-_35419430_35419434	0.630429	FOXA2.p3	AF134204|Pate4|56872|prostate and testis expressed 4
mm9_v1_chr1_+_132762353_132762436	0.62676	FOXA2.p3	AK007714|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK155943|Faim3|69169|Fas apoptotic inhibitory molecule 3	NM_026976|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK156523|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227385|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227386|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227387|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227388|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227389|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227390|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227391|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227392|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227393|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr10_-_62255007_62255115	0.62626	FOXA2.p3	BC034174|Ccar1|67500|cell division cycle and apoptosis regulator 1	BC051052|Ccar1|67500|cell division cycle and apoptosis regulator 1	NM_026201|Ccar1|67500|cell division cycle and apoptosis regulator 1
mm9_v1_chr19_+_56536126_56536129	0.626159	FOXA2.p3	NM_001164263|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	NM_172641|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK036908|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene	AK053921|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr8_-_107779027_107779052	0.623134	FOXA2.p3	AK169360|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	NM_178879|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene	AK032108|B3gnt9-ps|97440|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, pseudogene
mm9_v1_chr1_-_132558108_132558210	0.622838	FOXA2.p3	AK136735|C4bp|12269|complement component 4 binding protein	AK162345|C4bp|12269|complement component 4 binding protein	AB094486|C4bp|12269|complement component 4 binding protein	AK149477|C4bp|12269|complement component 4 binding protein	BC012257|C4bp|12269|complement component 4 binding protein	AB094485|C4bp|12269|complement component 4 binding protein	NM_007576|C4bp|12269|complement component 4 binding protein	AK050344|C4bp|12269|complement component 4 binding protein	AK149468|C4bp|12269|complement component 4 binding protein	M17122|C4bp|12269|complement component 4 binding protein
mm9_v1_chr8_-_70498472_70498472	0.618012	FOXA2.p3	AB220685|Psd3|234353|pleckstrin and Sec7 domain containing 3	NM_177698|Psd3|234353|pleckstrin and Sec7 domain containing 3
mm9_v1_chr2_+_158157639_158157652	0.617516	FOXA2.p3	AJ010499|Lbp|16803|lipopolysaccharide binding protein
mm9_v1_chr17_-_33204849_33205002	0.61436	FOXA2.p3	BC150955|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene	AK014800|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene	AK077044|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene	NM_001009544|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene
mm9_v1_chr18_-_39572137_39572180	0.61151	FOXA2.p3	AK171439|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	AK163857|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr3_+_89866717_89866721	0.61067	FOXA2.p3	AK007060|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene	NM_028567|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene	BC048560|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene
mm9_v1_chr17_+_47767638_47767638	0.609793	FOXA2.p3	BC060712|Usp49|224836|ubiquitin specific peptidase 49	NM_198421|Usp49|224836|ubiquitin specific peptidase 49
mm9_v1_chr2_+_128604653_128604725	0.608329	FOXA2.p3	AK029009|Mertk|17289|c-mer proto-oncogene tyrosine kinase
mm9_v1_chr6_-_56312803_56312803	0.602847	FOXA2.p3	AK050499|Pde1c|18575|phosphodiesterase 1C	NM_001159960|Pde1c|18575|phosphodiesterase 1C
mm9_v1_chr6_-_87800966_87801099	0.602487	FOXA2.p3	AK078427|Cnbp|12785|cellular nucleic acid binding protein	L12693|Cnbp|12785|cellular nucleic acid binding protein	X63866|Cnbp|12785|cellular nucleic acid binding protein	Z11870|Cnbp|12785|cellular nucleic acid binding protein	Z11871|Cnbp|12785|cellular nucleic acid binding protein	BC058723|Cnbp|12785|cellular nucleic acid binding protein	U20326|Cnbp|12785|cellular nucleic acid binding protein	AK151528|Cnbp|12785|cellular nucleic acid binding protein	AK146593|Cnbp|12785|cellular nucleic acid binding protein	AK159810|Cnbp|12785|cellular nucleic acid binding protein	AK153414|Cnbp|12785|cellular nucleic acid binding protein	AK147157|Cnbp|12785|cellular nucleic acid binding protein	AK146367|Cnbp|12785|cellular nucleic acid binding protein	AK145444|Cnbp|12785|cellular nucleic acid binding protein	AK146224|Cnbp|12785|cellular nucleic acid binding protein	AK151961|Cnbp|12785|cellular nucleic acid binding protein	AK146301|Cnbp|12785|cellular nucleic acid binding protein	AK146344|Cnbp|12785|cellular nucleic acid binding protein	AK151317|Cnbp|12785|cellular nucleic acid binding protein	AK144740|Cnbp|12785|cellular nucleic acid binding protein	AK075760|Cnbp|12785|cellular nucleic acid binding protein	NM_001109745|Cnbp|12785|cellular nucleic acid binding protein	NM_001109746|Cnbp|12785|cellular nucleic acid binding protein	NM_013493|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr15_+_32107043_32107046	0.60121	FOXA2.p3	BC111811|Tas2r119|57254|taste receptor, type 2, member 119	BC128079|Tas2r119|57254|taste receptor, type 2, member 119	BC152359|Tas2r119|57254|taste receptor, type 2, member 119	NM_020503|Tas2r119|57254|taste receptor, type 2, member 119	BC128078|Tas2r119|57254|taste receptor, type 2, member 119
mm9_v1_chrX_+_30732633_30732678	0.599916	FOXA2.p3	NM_001168334|Gm2799|100040482|predicted gene 2799	NM_027955|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr2_+_181501718_181501871	0.598177	FOXA2.p3	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr19_-_28085534_28085655	0.597501	FOXA2.p3	AK030008|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	AK140928|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	BC017598|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	AK041120|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)	NM_011265|Rfx3|19726|regulatory factor X, 3 (influences HLA class II expression)
mm9_v1_chr11_+_53270706_53270763	0.594972	FOXA2.p3	NM_027917|Shroom1|71774|shroom family member 1	BC005761|Shroom1|71774|shroom family member 1	AK035462|Shroom1|71774|shroom family member 1	AK085693|Shroom1|71774|shroom family member 1
mm9_v1_chr17_-_26978355_26978414	0.593504	FOXA2.p3	BC139299|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	BC139303|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	AK142146|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chr7_+_87377748_87377824	0.592039	FOXA2.p3	AK166345|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK143704|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK085577|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK086166|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	NM_178752|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK084531|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	BC037479|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene
mm9_v1_chr14_-_58017264_58017339	0.591719	FOXA2.p3	AB359906|Cryl1|68631|crystallin, lambda 1	BC004074|Cryl1|68631|crystallin, lambda 1	NM_030004|Cryl1|68631|crystallin, lambda 1	AK020717|Cryl1|68631|crystallin, lambda 1	AK135834|Cryl1|68631|crystallin, lambda 1	BC027064|Cryl1|68631|crystallin, lambda 1	AK080625|Cryl1|68631|crystallin, lambda 1
mm9_v1_chr9_+_7628229_7628230	0.591146	FOXA2.p3	BC152335|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	BC152336|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	AF155933|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	NM_013903|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)
mm9_v1_chr5_+_150821249_150821339	0.590974	FOXA2.p3	AF346501|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	NM_080468|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC120741|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144802|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	BC144803|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2	AK034592|Rxfp2|140498|relaxin/insulin-like family peptide receptor 2
mm9_v1_chr13_-_93914519_93914678	0.590242	FOXA2.p3	AK010195|Cmya5|76469|cardiomyopathy associated 5	AJ575748|Cmya5|76469|cardiomyopathy associated 5	NM_023821|Cmya5|76469|cardiomyopathy associated 5
mm9_v1_chr3_+_95039985_95040105	0.590033	FOXA2.p3	
mm9_v1_chr10_+_74674793_74674887	0.586866	FOXA2.p3	AK035500|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AY884297|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	NM_153406|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK052716|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK172502|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like
mm9_v1_chr13_+_43497279_43497424	0.584529	FOXA2.p3	AK140839|Nol7|70078|nucleolar protein 7
mm9_v1_chr17_+_31091623_31091627	0.583477	FOXA2.p3	AY771616|Umodl1|52020|uromodulin-like 1	AY771617|Umodl1|52020|uromodulin-like 1	AY771618|Umodl1|52020|uromodulin-like 1	BC051427|Umodl1|52020|uromodulin-like 1	NM_177465|Umodl1|52020|uromodulin-like 1
mm9_v1_chr4_+_88481428_88481428	0.583138	FOXA2.p3	BC120910|Ifna5|15968|interferon alpha 5	BC120911|Ifna5|15968|interferon alpha 5	NM_010505|Ifna5|15968|interferon alpha 5
mm9_v1_chr8_-_73046985_73047078	0.582891	FOXA2.p3	AK155003|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK013135|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	AK002695|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC048938|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	BC053944|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene	NM_029366|2810422J05Rik|75620|RIKEN cDNA 2810422J05 gene
mm9_v1_chr1_-_146024404_146024501	0.58126	FOXA2.p3	AF498319|Rgs13|246709|regulator of G-protein signaling 13	BC049624|Rgs13|246709|regulator of G-protein signaling 13	AK043268|Rgs13|246709|regulator of G-protein signaling 13	NM_153171|Rgs13|246709|regulator of G-protein signaling 13
mm9_v1_chr11_+_46564669_46564678	0.580943	FOXA2.p3	NM_134248|Havcr1|171283|hepatitis A virus cellular receptor 1	AF399829|Havcr1|171283|hepatitis A virus cellular receptor 1	AF399830|Havcr1|171283|hepatitis A virus cellular receptor 1
mm9_v1_chr16_-_29544883_29544949	0.579392	FOXA2.p3	AK029367|Atp13a4|224079|ATPase type 13A4	AK014520|Atp13a4|224079|ATPase type 13A4	AK029303|Atp13a4|224079|ATPase type 13A4	AK028776|Atp13a4|224079|ATPase type 13A4	NM_001164613|Atp13a4|224079|ATPase type 13A4
mm9_v1_chr12_-_29308124_29308156	0.578688	FOXA2.p3	BC104380|Colec11|71693|collectin sub-family member 11	BC104381|Colec11|71693|collectin sub-family member 11	AK003121|Colec11|71693|collectin sub-family member 11	NM_027866|Colec11|71693|collectin sub-family member 11
mm9_v1_chrX_-_150130711_150130822	0.576371	FOXA2.p3	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr19_-_32182638_32182709	0.576204	FOXA2.p3	AB037111|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK080951|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK041937|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK047692|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK046540|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK166100|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK034493|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chrX_-_159987479_159987608	0.57387	FOXA2.p3	BC113145|Grpr|14829|gastrin releasing peptide receptor	M61000|Grpr|14829|gastrin releasing peptide receptor	NM_008177|Grpr|14829|gastrin releasing peptide receptor	AK033473|Grpr|14829|gastrin releasing peptide receptor	M57922|Grpr|14829|gastrin releasing peptide receptor
mm9_v1_chr11_-_120823366_120823479	0.5698	FOXA2.p3	AK178709|Csnk1d|104318|casein kinase 1, delta	AK199847|Csnk1d|104318|casein kinase 1, delta	AK210543|Csnk1d|104318|casein kinase 1, delta
mm9_v1_chr1_-_183111470_183111575	0.569222	FOXA2.p3	AK211036|Wdr26|226757|WD repeat domain 26
mm9_v1_chr2_+_34287544_34287544	0.565906	FOXA2.p3	BC090644|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	NM_177345|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr2_-_91489909_91489949	0.563135	FOXA2.p3	AK132515|Zfp408|381410|zinc finger protein 408	NM_001033451|Zfp408|381410|zinc finger protein 408
mm9_v1_chr2_+_25632536_25632536	0.562759	FOXA2.p3	AY301267|Lcn11|227630|lipocalin 11	NM_001100455|Lcn11|227630|lipocalin 11
mm9_v1_chr4_-_73596693_73596749	0.556702	FOXA2.p3	BC115483|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	BC115484|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009124|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009097|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027104|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027981|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene
mm9_v1_chr6_-_78328836_78328858	0.554757	FOXA2.p3	AK019033|Reg3d|30053|regenerating islet-derived 3 delta	AB035204|Reg3d|30053|regenerating islet-derived 3 delta	BC113760|Reg3d|30053|regenerating islet-derived 3 delta	AB028625|Reg3d|30053|regenerating islet-derived 3 delta	NM_001161741|Reg3d|30053|regenerating islet-derived 3 delta	NM_013893|Reg3d|30053|regenerating islet-derived 3 delta
mm9_v1_chr11_+_33863012_33863012	0.554614	FOXA2.p3	AF020711|Kcnmb1|16533|potassium large conductance calcium-activated channel, subfamily M, beta member 1	NM_031169|Kcnmb1|16533|potassium large conductance calcium-activated channel, subfamily M, beta member 1
mm9_v1_chr11_-_98671371_98671404	0.548959	FOXA2.p3	AK087290|Gm12359|100037262|predicted gene 12359	AK142978|Gm12359|100037262|predicted gene 12359
mm9_v1_chr3_-_122687238_122687429	0.547826	FOXA2.p3	AK040332|Usp53|99526|ubiquitin specific peptidase 53	AK140453|Usp53|99526|ubiquitin specific peptidase 53	BC096383|Usp53|99526|ubiquitin specific peptidase 53	AK036876|Usp53|99526|ubiquitin specific peptidase 53	NM_133857|Usp53|99526|ubiquitin specific peptidase 53	AK030317|Usp53|99526|ubiquitin specific peptidase 53	AK045953|Usp53|99526|ubiquitin specific peptidase 53
mm9_v1_chr2_-_101489613_101489698	0.546522	FOXA2.p3	BC138342|Rag1|19373|recombination activating gene 1	M29475|Rag1|19373|recombination activating gene 1	AK088725|Rag1|19373|recombination activating gene 1	AK162974|Rag1|19373|recombination activating gene 1	DQ112091|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	DQ112092|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_009019|Rag1|19373|recombination activating gene 1
mm9_v1_chr6_-_128493413_128493444	0.544897	FOXA2.p3	BC048546|BC048546|232400|cDNA sequence BC048546
mm9_v1_chr16_+_38362258_38362337	0.542364	FOXA2.p3	NM_001081984|Popdc2|64082|popeye domain containing 2	BC064005|Popdc2|64082|popeye domain containing 2	NM_022318|Popdc2|64082|popeye domain containing 2	AK084713|Popdc2|64082|popeye domain containing 2	AF204175|Popdc2|64082|popeye domain containing 2
mm9_v1_chr11_-_101087730_101087737	0.541862	FOXA2.p3	AK154565|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr17_+_75864877_75864952	0.541857	FOXA2.p3	NM_207246|Rasgrp3|240168|RAS, guanyl releasing protein 3	BC066127|Rasgrp3|240168|RAS, guanyl releasing protein 3
mm9_v1_chr3_+_133902563_133902608	0.541131	FOXA2.p3	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr9_+_39201377_39201377	0.539216	FOXA2.p3	NM_001011812|Olfr951|258046|olfactory receptor 951
mm9_v1_chr18_+_6603626_6603630	0.538697	FOXA2.p3	BC049627|4921524L21Rik|70901|RIKEN cDNA 4921524L21 gene	AK014961|4921524L21Rik|70901|RIKEN cDNA 4921524L21 gene	NM_027598|4921524L21Rik|70901|RIKEN cDNA 4921524L21 gene
mm9_v1_chr11_+_75813413_75813528	0.535548	FOXA2.p3	NM_198637|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	BC049758|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK006044|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK132806|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene
mm9_v1_chr15_+_80085923_80086003	0.535124	FOXA2.p3	AK146193|Atf4|11911|activating transcription factor 4	AK144777|Atf4|11911|activating transcription factor 4	AK155254|Atf4|11911|activating transcription factor 4	AK138657|Atf4|11911|activating transcription factor 4	AK150231|Atf4|11911|activating transcription factor 4	X61507|Atf4|11911|activating transcription factor 4	AK156298|Atf4|11911|activating transcription factor 4	M94087|Atf4|11911|activating transcription factor 4	BC031542|Atf4|11911|activating transcription factor 4	AK157839|Atf4|11911|activating transcription factor 4	AK195416|Atf4|11911|activating transcription factor 4
mm9_v1_chr7_+_52965052_52965376	0.534876	FOXA2.p3	AK192990|Dbp|13170|D site albumin promoter binding protein
mm9_v1_chr9_+_110379461_110379473	0.532465	FOXA2.p3	NM_010628|Kif9|16578|kinesin family member 9
mm9_v1_chr2_+_153700780_153700825	0.530371	FOXA2.p3	AK010157|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	NM_025631|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009504|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK028158|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009346|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009619|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009871|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009794|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010120|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010154|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010215|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK028156|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK075874|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK160516|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009776|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010130|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	BC116681|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	BC116727|Bpil1|66557|bactericidal/permeability-increasing protein-like 1
mm9_v1_chr6_+_115372083_115372128	0.529882	FOXA2.p3	AY208183|Pparg|19016|peroxisome proliferator activated receptor gamma	AY208184|Pparg|19016|peroxisome proliferator activated receptor gamma	AY243585|Pparg|19016|peroxisome proliferator activated receptor gamma	BC021798|Pparg|19016|peroxisome proliferator activated receptor gamma	NM_011146|Pparg|19016|peroxisome proliferator activated receptor gamma	U09138|Pparg|19016|peroxisome proliferator activated receptor gamma	EF062476|Pparg|19016|peroxisome proliferator activated receptor gamma	CT010340|Pparg|19016|peroxisome proliferator activated receptor gamma
mm9_v1_chr3_-_20266045_20266098	0.528799	FOXA2.p3	BC109153|Agtr1b|11608|angiotensin II receptor, type 1b	AK087228|Agtr1b|11608|angiotensin II receptor, type 1b	NM_175086|Agtr1b|11608|angiotensin II receptor, type 1b
mm9_v1_chr16_+_23609986_23610176	0.525486	FOXA2.p3	NM_023386|Rtp4|67775|receptor transporter protein 4	AK018021|Rtp4|67775|receptor transporter protein 4	AJ251364|Rtp4|67775|receptor transporter protein 4	AK007477|Rtp4|67775|receptor transporter protein 4	BC024872|Rtp4|67775|receptor transporter protein 4	AY562228|Rtp4|67775|receptor transporter protein 4
mm9_v1_chr1_+_90203286_90203286	0.523642	FOXA2.p3	BC117934|Trpm8|171382|transient receptor potential cation channel, subfamily M, member 8	NM_134252|Trpm8|171382|transient receptor potential cation channel, subfamily M, member 8
mm9_v1_chr14_-_11285927_11285966	0.523242	FOXA2.p3	BC012662|Fhit|14198|fragile histidine triad gene
mm9_v1_chr13_+_58258986_58259046	0.52183	FOXA2.p3	AK040588|5133401N09Rik|75731|RIKEN cDNA 5133401N09 gene	NM_001048060|5133401N09Rik|75731|RIKEN cDNA 5133401N09 gene	NM_198004|5133401N09Rik|75731|RIKEN cDNA 5133401N09 gene	AK045763|5133401N09Rik|75731|RIKEN cDNA 5133401N09 gene	AK017224|5133401N09Rik|75731|RIKEN cDNA 5133401N09 gene	AK032811|5133401N09Rik|75731|RIKEN cDNA 5133401N09 gene	BC026742|5133401N09Rik|75731|RIKEN cDNA 5133401N09 gene
mm9_v1_chr2_-_27331122_27331221	0.521101	FOXA2.p3	AK076472|Brd3|67382|bromodomain containing 3	AK136429|Brd3|67382|bromodomain containing 3	BC004832|Brd3|67382|bromodomain containing 3	AF269193|Brd3|67382|bromodomain containing 3	AK161164|Brd3|67382|bromodomain containing 3	AK167573|Brd3|67382|bromodomain containing 3	AK136007|Brd3|67382|bromodomain containing 3	AK160752|Brd3|67382|bromodomain containing 3	AK081471|Brd3|67382|bromodomain containing 3	AK037435|Brd3|67382|bromodomain containing 3	AK159827|Brd3|67382|bromodomain containing 3	NM_001113573|Brd3|67382|bromodomain containing 3	NM_001113574|Brd3|67382|bromodomain containing 3
mm9_v1_chr10_-_127617294_127617366	0.52095	FOXA2.p3	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr9_+_7692110_7692113	0.519428	FOXA2.p3	BC119057|Mmp7|17393|matrix metallopeptidase 7	BC120655|Mmp7|17393|matrix metallopeptidase 7	NM_010810|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr7_+_5626205_5626228	0.518567	FOXA2.p3	AF324867|Vmn1r62|81016|vomeronasal 1 receptor 62	NM_030741|Vmn1r62|81016|vomeronasal 1 receptor 62	BC113757|Vmn1r62|81016|vomeronasal 1 receptor 62
mm9_v1_chr9_+_106402297_106402322	0.515455	FOXA2.p3	NM_001146701|Iqcf1|74267|IQ motif containing F1	NM_028843|Iqcf1|74267|IQ motif containing F1	BC049769|Iqcf1|74267|IQ motif containing F1	AK006797|Iqcf1|74267|IQ motif containing F1
mm9_v1_chr12_-_86097486_86097537	0.51528	FOXA2.p3	
mm9_v1_chr19_-_29101759_29101824	0.515245	FOXA2.p3	
mm9_v1_chr14_+_33647147_33647147	0.512767	FOXA2.p3	NM_001164485|Fam170b|105511|family with sequence similarity 170, member B
mm9_v1_chr2_+_179805287_179805329	0.511848	FOXA2.p3	AK163448|Gtpbp5|52856|GTP binding protein 5	AK040689|Gtpbp5|52856|GTP binding protein 5	NM_001083328|Gtpbp5|52856|GTP binding protein 5	NM_001083329|Gtpbp5|52856|GTP binding protein 5	NM_028422|Gtpbp5|52856|GTP binding protein 5	NM_181424|Gtpbp5|52856|GTP binding protein 5	AK013710|Gtpbp5|52856|GTP binding protein 5	BC025144|Gtpbp5|52856|GTP binding protein 5
mm9_v1_chr6_+_56935288_56935335	0.510498	FOXA2.p3	BC138068|Vmn1r5|171192|vomeronasal 1 receptor 5	BC138069|Vmn1r5|171192|vomeronasal 1 receptor 5	NM_134174|Vmn1r5|171192|vomeronasal 1 receptor 5
mm9_v1_chr1_+_192752368_192752423	0.509773	FOXA2.p3	AK158731|Angel2|52477|angel homolog 2 (Drosophila)	NM_021421|Angel2|52477|angel homolog 2 (Drosophila)	AK077039|Angel2|52477|angel homolog 2 (Drosophila)	AB041602|Angel2|52477|angel homolog 2 (Drosophila)	AK017545|Angel2|52477|angel homolog 2 (Drosophila)	BC024907|Angel2|52477|angel homolog 2 (Drosophila)
mm9_v1_chr10_+_21015762_21015859	0.509463	FOXA2.p3	NM_001042593|Hbs1l|56422|Hbs1-like (S. cerevisiae)	NM_001145209|Hbs1l|56422|Hbs1-like (S. cerevisiae)	NM_019702|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK006626|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK146678|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK166140|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK168671|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK169281|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK012856|Hbs1l|56422|Hbs1-like (S. cerevisiae)	AK173091|Hbs1l|56422|Hbs1-like (S. cerevisiae)	BC085235|Hbs1l|56422|Hbs1-like (S. cerevisiae)	BC010251|Hbs1l|56422|Hbs1-like (S. cerevisiae)
mm9_v1_chr8_+_125299356_125299477	0.504002	FOXA2.p3	AK141579|Acsf3|257633|acyl-CoA synthetase family member 3	NM_144932|Acsf3|257633|acyl-CoA synthetase family member 3	AK144352|Acsf3|257633|acyl-CoA synthetase family member 3
mm9_v1_chr11_-_106860803_106860838	0.503816	FOXA2.p3	NM_010655|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr1_+_9788206_9788302	0.500599	FOXA2.p3	NM_133220|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_177547|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK143836|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031133|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151793|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171120|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171186|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151867|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171678|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK172323|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK028722|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039247|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039427|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151181|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166414|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151996|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AF312007|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr6_-_135204232_135204353	0.496453	FOXA2.p3	D87325|Gsg1|14840|germ cell-specific gene 1	NM_001080553|Gsg1|14840|germ cell-specific gene 1	NM_010352|Gsg1|14840|germ cell-specific gene 1
mm9_v1_chr19_+_56536148_56536166	0.493552	FOXA2.p3	BC090250|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr17_-_66234064_66234193	0.493508	FOXA2.p3	AK019116|Ralbp1|19765|ralA binding protein 1	AK159404|Ralbp1|19765|ralA binding protein 1	X80937|Ralbp1|19765|ralA binding protein 1	BC054329|Ralbp1|19765|ralA binding protein 1	BC076636|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr19_+_12502394_12502461	0.492501	FOXA2.p3	NM_019540|Pfpl|56093|pore forming protein-like	AF250839|Pfpl|56093|pore forming protein-like	BC052215|Pfpl|56093|pore forming protein-like	AK141262|Pfpl|56093|pore forming protein-like
mm9_v1_chr2_-_84314191_84314337	0.48935	FOXA2.p3	AK167522|Tfpi|21788|tissue factor pathway inhibitor	AK028356|Tfpi|21788|tissue factor pathway inhibitor	NM_011576|Tfpi|21788|tissue factor pathway inhibitor
mm9_v1_chr7_+_149489406_149489406	0.488453	FOXA2.p3	NM_015809|Krtap5-4|50775|keratin associated protein 5-4
mm9_v1_chr11_-_98636689_98636697	0.484763	FOXA2.p3	AK154931|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1	AK155597|Nr1d1|217166|nuclear receptor subfamily 1, group D, member 1
mm9_v1_chr6_+_134961629_134961652	0.481549	FOXA2.p3	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr15_-_12479631_12479703	0.476454	FOXA2.p3	AK021207|Pdzd2|68070|PDZ domain containing 2
mm9_v1_chr16_-_56690646_56690662	0.475443	FOXA2.p3	
mm9_v1_chr5_-_31482270_31482315	0.474834	FOXA2.p3	AK083636|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	BC034369|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK151300|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK035792|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK043944|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK152439|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK149771|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK159938|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK088596|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK138760|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK004895|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta	AK154056|Gtf3c2|71752|general transcription factor IIIC, polypeptide 2, beta
mm9_v1_chr12_+_66176588_66176613	0.472148	FOXA2.p3	AK039944|Fancm|104806|Fanconi anemia, complementation group M	AK084697|Fancm|104806|Fanconi anemia, complementation group M	AK086395|Fancm|104806|Fanconi anemia, complementation group M	AK050306|Fancm|104806|Fanconi anemia, complementation group M	NM_178912|Fancm|104806|Fanconi anemia, complementation group M	AK053715|Fancm|104806|Fanconi anemia, complementation group M	BC150785|Fancm|104806|Fanconi anemia, complementation group M	AK173211|Fancm|104806|Fanconi anemia, complementation group M
mm9_v1_chr15_+_9365782_9365824	0.468869	FOXA2.p3	AK006467|Capsl|75568|calcyphosine-like	NM_029341|Capsl|75568|calcyphosine-like	BC061015|Capsl|75568|calcyphosine-like
mm9_v1_chr7_-_139978601_139978617	0.467763	FOXA2.p3	BC035523|Fam53b|77938|family with sequence similarity 53, member B	AK020830|Fam53b|77938|family with sequence similarity 53, member B	NM_175268|Fam53b|77938|family with sequence similarity 53, member B
mm9_v1_chr3_+_121948693_121948990	0.467183	FOXA2.p3	U95053|Gclm|14630|glutamate-cysteine ligase, modifier subunit	CT010256|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK176933|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK184377|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr8_+_107937521_107937521	0.466359	FOXA2.p3	NM_001170788|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr10_-_86956393_86956406	0.465886	FOXA2.p3	AK141866|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	AK143210|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)	NM_008553|Ascl1|17172|achaete-scute complex homolog 1 (Drosophila)
mm9_v1_chr16_-_92321652_92321685	0.465134	FOXA2.p3	AK029653|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	BC147584|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	BC147622|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	AK016199|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	NM_029252|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene
mm9_v1_chrX_-_65174607_65174624	0.462906	FOXA2.p3	AK016292|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	BC125317|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	BC138016|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	AK017084|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	NM_025763|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene
mm9_v1_chrX_+_150916544_150916544	0.462147	FOXA2.p3	AK016025|4930542N07Rik|75185|RIKEN cDNA 4930542N07 gene	NM_029199|4930542N07Rik|75185|RIKEN cDNA 4930542N07 gene
mm9_v1_chrX_-_151582391_151582391	0.461331	FOXA2.p3	BC100353|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene	NM_001081671|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene
mm9_v1_chr9_-_99258896_99258975	0.460735	FOXA2.p3	BC118967|Esyt3|272636|extended synaptotagmin-like protein 3	AK220532|Esyt3|272636|extended synaptotagmin-like protein 3	AK086367|Esyt3|272636|extended synaptotagmin-like protein 3	NM_177775|Esyt3|272636|extended synaptotagmin-like protein 3	AK142948|Esyt3|272636|extended synaptotagmin-like protein 3
mm9_v1_chr7_+_100023762_100023966	0.459545	FOXA2.p3	NM_028243|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011112|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK051677|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK166282|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK011816|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC089575|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	AK054462|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC055022|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)	BC026424|Prcp|72461|prolylcarboxypeptidase (angiotensinase C)
mm9_v1_chr15_-_93349866_93349962	0.459454	FOXA2.p3	BC117892|Prickle1|106042|prickle homolog 1 (Drosophila)	BC117893|Prickle1|106042|prickle homolog 1 (Drosophila)	AK147883|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr6_-_120481314_120481342	0.459065	FOXA2.p3	BC014705|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	NM_144815|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	AK040291|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	AK044228|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)	AK140387|Cecr5|214932|cat eye syndrome chromosome region, candidate 5 homolog (human)
mm9_v1_chr6_+_90072636_90072636	0.459002	FOXA2.p3	BC046308|Vmn1r51|22296|vomeronasal 1 receptor 51	NM_011683|Vmn1r51|22296|vomeronasal 1 receptor 51
mm9_v1_chr19_+_41624128_41624128	0.456541	FOXA2.p3	AK041090|Lcor|212391|ligand dependent nuclear receptor corepressor	NM_172154|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr4_-_134323845_134323948	0.450489	FOXA2.p3	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chr2_-_90319326_90319330	0.4475	FOXA2.p3	D83203|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	NM_001135657|Ptprj|19271|protein tyrosine phosphatase, receptor type, J
mm9_v1_chr19_-_7877065_7877081	0.447371	FOXA2.p3	AJ132857|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr3_-_92819586_92819610	0.446151	FOXA2.p3	BC060280|Crct1|74175|cysteine-rich C-terminal 1	AK009010|Crct1|74175|cysteine-rich C-terminal 1	NM_028798|Crct1|74175|cysteine-rich C-terminal 1
mm9_v1_chr6_+_116288075_116288140	0.446079	FOXA2.p3	BC053090|March8|71779|membrane-associated ring finger (C3HC4) 8	NM_027920|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chrX_+_3907010_3907055	0.444369	FOXA2.p3	NM_001085543|Gm14347|627264|predicted gene 14347	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like
mm9_v1_chr9_-_90165508_90165664	0.444359	FOXA2.p3	AK089175|Tbc1d2b|67016|TBC1 domain family, member 2B	AK129273|Tbc1d2b|67016|TBC1 domain family, member 2B	AK156788|Tbc1d2b|67016|TBC1 domain family, member 2B	NM_194334|Tbc1d2b|67016|TBC1 domain family, member 2B	AK148382|Tbc1d2b|67016|TBC1 domain family, member 2B
mm9_v1_chr14_-_52857246_52857246	0.442375	FOXA2.p3	AY863219|Chd8|67772|chromodomain helicase DNA binding protein 8	DQ190419|Chd8|67772|chromodomain helicase DNA binding protein 8	NM_201637|Chd8|67772|chromodomain helicase DNA binding protein 8
mm9_v1_chr9_-_40792541_40792554	0.440012	FOXA2.p3	AK163744|Crtam|54698|cytotoxic and regulatory T cell molecule
mm9_v1_chr5_-_21371421_21371421	0.438051	FOXA2.p3	AF529192|Slc26a5|80979|solute carrier family 26, member 5	NM_030727|Slc26a5|80979|solute carrier family 26, member 5
mm9_v1_chr3_+_60432922_60432975	0.437409	FOXA2.p3	AK166145|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr2_+_24200925_24200957	0.436395	FOXA2.p3	M74294|Il1rn|16181|interleukin 1 receptor antagonist	AK089222|Il1rn|16181|interleukin 1 receptor antagonist	AK154601|Il1rn|16181|interleukin 1 receptor antagonist	AK155263|Il1rn|16181|interleukin 1 receptor antagonist	AK155756|Il1rn|16181|interleukin 1 receptor antagonist	AK155846|Il1rn|16181|interleukin 1 receptor antagonist	AK155908|Il1rn|16181|interleukin 1 receptor antagonist	AK155798|Il1rn|16181|interleukin 1 receptor antagonist	AK156034|Il1rn|16181|interleukin 1 receptor antagonist	M57525|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr10_+_21698470_21698479	0.435678	FOXA2.p3	NM_001161847|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr3_-_151412812_151412922	0.434295	FOXA2.p3	AJ299405|Ifi44|99899|interferon-induced protein 44	BC111882|Ifi44|99899|interferon-induced protein 44	BC112402|Ifi44|99899|interferon-induced protein 44	AK171676|Ifi44|99899|interferon-induced protein 44	AK085650|Ifi44|99899|interferon-induced protein 44	AK079749|Ifi44|99899|interferon-induced protein 44	AK136553|Ifi44|99899|interferon-induced protein 44	AK151346|Ifi44|99899|interferon-induced protein 44	AK085407|Ifi44|99899|interferon-induced protein 44	NM_133871|Ifi44|99899|interferon-induced protein 44
mm9_v1_chr13_+_4573320_4573394	0.431466	FOXA2.p3	AK020439|Akr1c21|77337|aldo-keto reductase family 1, member C21	NM_029901|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC061057|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC013531|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC091761|Akr1c21|77337|aldo-keto reductase family 1, member C21	AB178898|Akr1c21|77337|aldo-keto reductase family 1, member C21	AY742217|Akr1c21|77337|aldo-keto reductase family 1, member C21
mm9_v1_chr14_-_57676781_57676936	0.430689	FOXA2.p3	NM_016975|Gja3|14611|gap junction protein, alpha 3	BC138492|Gja3|14611|gap junction protein, alpha 3	BC138493|Gja3|14611|gap junction protein, alpha 3	AY390398|Gja3|14611|gap junction protein, alpha 3
mm9_v1_chr2_-_121282428_121282516	0.429684	FOXA2.p3	BC026459|Serinc4|574418|serine incorporator 4	BC083132|Serinc4|574418|serine incorporator 4	NM_001025371|Serinc4|574418|serine incorporator 4	AK044479|Serinc4|574418|serine incorporator 4
mm9_v1_chr1_-_175696989_175697156	0.429626	FOXA2.p3	AK150522|Ifi204|15951|interferon activated gene 204	NM_008329|Ifi204|15951|interferon activated gene 204	AK138785|Ifi204|15951|interferon activated gene 204
mm9_v1_chr7_-_134027930_134028177	0.42279	FOXA2.p3	BC077714|Taok2|381921|TAO kinase 2	BC075676|Taok2|381921|TAO kinase 2
mm9_v1_chr17_+_80615253_80615253	0.42229	FOXA2.p3	BC118946|Ttc39d|67737|tetratricopeptide repeat domain 39D	BC118947|Ttc39d|67737|tetratricopeptide repeat domain 39D	NM_026351|Ttc39d|67737|tetratricopeptide repeat domain 39D
mm9_v1_chr1_-_141755209_141755302	0.421542	FOXA2.p3	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chr2_+_122573644_122573786	0.419183	FOXA2.p3	
mm9_v1_chr1_-_197002841_197002908	0.418322	FOXA2.p3	BC109344|Cr2|12902|complement receptor 2	BC109345|Cr2|12902|complement receptor 2	AK003072|Cr2|12902|complement receptor 2	NM_007758|Cr2|12902|complement receptor 2
mm9_v1_chr5_-_143579060_143579087	0.414939	FOXA2.p3	BC049818|Tnrc18|231861|trinucleotide repeat containing 18	NM_001122730|Tnrc18|231861|trinucleotide repeat containing 18	NM_178242|Tnrc18|231861|trinucleotide repeat containing 18
mm9_v1_chr19_-_12870612_12870615	0.414315	FOXA2.p3	NM_053009|Zfp91|109910|zinc finger protein 91	AK147560|Zfp91|109910|zinc finger protein 91
mm9_v1_chr10_+_61158256_61158273	0.41323	FOXA2.p3	AK005069|Tysnd1|71767|trypsin domain containing 1	NM_027912|Tysnd1|71767|trypsin domain containing 1	BC020273|Tysnd1|71767|trypsin domain containing 1
mm9_v1_chr6_-_56312170_56312512	0.413149	FOXA2.p3	AK082497|Pde1c|18575|phosphodiesterase 1C	BC032277|Pde1c|18575|phosphodiesterase 1C	AK139923|Pde1c|18575|phosphodiesterase 1C	AK017183|Pde1c|18575|phosphodiesterase 1C	AK082180|Pde1c|18575|phosphodiesterase 1C	AK030423|Pde1c|18575|phosphodiesterase 1C	NM_001025568|Pde1c|18575|phosphodiesterase 1C	NM_001159952|Pde1c|18575|phosphodiesterase 1C	NM_001159953|Pde1c|18575|phosphodiesterase 1C	L76946|Pde1c|18575|phosphodiesterase 1C	NM_011054|Pde1c|18575|phosphodiesterase 1C
mm9_v1_chr10_-_75905451_75905555	0.412278	FOXA2.p3	BC100380|Pcnt|18541|pericentrin (kendrin)	BC034865|Pcnt|18541|pericentrin (kendrin)	BC085244|Pcnt|18541|pericentrin (kendrin)	AK145315|Pcnt|18541|pericentrin (kendrin)	AB207233|Pcnt|18541|pericentrin (kendrin)
mm9_v1_chr4_-_4004640_4004660	0.411606	FOXA2.p3	AK076465|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	BC125450|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	BC125452|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	NM_001080710|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6
mm9_v1_chr8_+_46154490_46154563	0.411286	FOXA2.p3	BC116900|Mtnr1a|17773|melatonin receptor 1A	BC119313|Mtnr1a|17773|melatonin receptor 1A	NM_008639|Mtnr1a|17773|melatonin receptor 1A	U52222|Mtnr1a|17773|melatonin receptor 1A
mm9_v1_chr4_-_35792385_35792444	0.409945	FOXA2.p3	BC137866|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC144985|Lingo2|242384|leucine rich repeat and Ig domain containing 2	BC145692|Lingo2|242384|leucine rich repeat and Ig domain containing 2	AK045639|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_001166001|Lingo2|242384|leucine rich repeat and Ig domain containing 2	NM_175516|Lingo2|242384|leucine rich repeat and Ig domain containing 2
mm9_v1_chr6_+_123179860_123179891	0.402463	FOXA2.p3	NM_001190320|Clec4n|56620|C-type lectin domain family 4, member n	NM_001190321|Clec4n|56620|C-type lectin domain family 4, member n	NM_020001|Clec4n|56620|C-type lectin domain family 4, member n	AK089166|Clec4n|56620|C-type lectin domain family 4, member n	AK131697|Clec4n|56620|C-type lectin domain family 4, member n	AK154673|Clec4n|56620|C-type lectin domain family 4, member n	AK171046|Clec4n|56620|C-type lectin domain family 4, member n	AF240357|Clec4n|56620|C-type lectin domain family 4, member n	AF240358|Clec4n|56620|C-type lectin domain family 4, member n	AF240359|Clec4n|56620|C-type lectin domain family 4, member n	BC023008|Clec4n|56620|C-type lectin domain family 4, member n
mm9_v1_chr9_-_109064517_109064535	0.401846	FOXA2.p3	BC099397|Fbxw21|320082|F-box and WD-40 domain protein 21	AK136136|Fbxw21|320082|F-box and WD-40 domain protein 21	AK087902|Fbxw21|320082|F-box and WD-40 domain protein 21	AK135949|Fbxw21|320082|F-box and WD-40 domain protein 21	AK087710|Fbxw21|320082|F-box and WD-40 domain protein 21	NM_177069|Fbxw21|320082|F-box and WD-40 domain protein 21
mm9_v1_chr7_+_51066659_51066663	0.400824	FOXA2.p3	BC027823|Klk7|23993|kallikrein related-peptidase 7 (chymotryptic, stratum corneum)
mm9_v1_chr3_+_102800607_102800650	0.398378	FOXA2.p3	
mm9_v1_chr9_+_107877887_107877985	0.397408	FOXA2.p3	AK054410|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK089235|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK004894|Uba7|74153|ubiquitin-like modifier activating enzyme 7	NM_023738|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK170644|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK170421|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK089256|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK172467|Uba7|74153|ubiquitin-like modifier activating enzyme 7	BC138843|Uba7|74153|ubiquitin-like modifier activating enzyme 7	AK129009|Uba7|74153|ubiquitin-like modifier activating enzyme 7
mm9_v1_chr17_+_72022598_72022608	0.397368	FOXA2.p3	NM_177087|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr16_-_92359659_92359712	0.393163	FOXA2.p3	BC094276|Kcne1|16509|potassium voltage-gated channel, Isk-related subfamily, member 1	AK008938|Kcne1|16509|potassium voltage-gated channel, Isk-related subfamily, member 1	AK028907|Kcne1|16509|potassium voltage-gated channel, Isk-related subfamily, member 1	NM_008424|Kcne1|16509|potassium voltage-gated channel, Isk-related subfamily, member 1
mm9_v1_chr11_+_5469686_5469713	0.38749	FOXA2.p3	AK132751|Ankrd36|76389|ankyrin repeat domain 36	NM_023816|Ankrd36|76389|ankyrin repeat domain 36	AF294328|Ankrd36|76389|ankyrin repeat domain 36	AK005925|Ankrd36|76389|ankyrin repeat domain 36
mm9_v1_chr7_-_35437859_35437910	0.386711	FOXA2.p3	BC031749|Kctd15|233107|potassium channel tetramerisation domain containing 15	NM_146188|Kctd15|233107|potassium channel tetramerisation domain containing 15
mm9_v1_chr5_-_77524050_77524182	0.386649	FOXA2.p3	AF536202|Hopx|74318|HOP homeobox
mm9_v1_chr2_+_109857966_109858261	0.384378	FOXA2.p3	AK147056|Ccdc34|68201|coiled-coil domain containing 34	NM_026613|Ccdc34|68201|coiled-coil domain containing 34	BC108339|Ccdc34|68201|coiled-coil domain containing 34	AK019172|Ccdc34|68201|coiled-coil domain containing 34	AK033555|Ccdc34|68201|coiled-coil domain containing 34	AK019247|Ccdc34|68201|coiled-coil domain containing 34	AK012383|Ccdc34|68201|coiled-coil domain containing 34	BC062248|Ccdc34|68201|coiled-coil domain containing 34	AK014021|Ccdc34|68201|coiled-coil domain containing 34	BC089458|Ccdc34|68201|coiled-coil domain containing 34	BC049229|Ccdc34|68201|coiled-coil domain containing 34
mm9_v1_chr16_-_35697586_35697611	0.383161	FOXA2.p3	AK211101|Dirc2|224132|disrupted in renal carcinoma 2 (human)
mm9_v1_chr4_-_127031320_127031326	0.382253	FOXA2.p3	AK132468|Gjb4|14621|gap junction protein, beta 4	AK076408|Gjb4|14621|gap junction protein, beta 4	NM_008127|Gjb4|14621|gap junction protein, beta 4
mm9_v1_chr16_+_87354429_87354497	0.381353	FOXA2.p3	AY456393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_001159331|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_026366|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116393|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC116394|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK160298|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK145617|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	BC098330|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK012019|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)	AY536887|N6amt1|67768|N-6 adenine-specific DNA methyltransferase 1 (putative)
mm9_v1_chr19_-_23727286_23727303	0.380375	FOXA2.p3	BC049563|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	AK006473|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	NM_026188|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene	AK014972|1700028P14Rik|67483|RIKEN cDNA 1700028P14 gene
mm9_v1_chr5_+_117724658_117724663	0.379973	FOXA2.p3	AK013486|Taok3|330177|TAO kinase 3
mm9_v1_chr17_-_21982590_21982733	0.379722	FOXA2.p3	AK148228|Zfp820|75424|zinc finger protein 820	AK011694|Zfp820|75424|zinc finger protein 820	NM_029281|Zfp820|75424|zinc finger protein 820	BC019219|Zfp820|75424|zinc finger protein 820
mm9_v1_chr1_-_45460310_45460349	0.378145	FOXA2.p3	BC043696|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr3_-_10208575_10208582	0.378004	FOXA2.p3	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr10_-_74495269_74495330	0.377629	FOXA2.p3	BC147792|Rtdr1|71236|rhabdoid tumor deletion region gene 1	BC147801|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163534|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163535|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK017008|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK077078|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163533|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_027730|Rtdr1|71236|rhabdoid tumor deletion region gene 1
mm9_v1_chr11_-_114851199_114851245	0.376397	FOXA2.p3	BC019814|Cd300ld|217305|CD300 molecule-like family member d	NM_145437|Cd300ld|217305|CD300 molecule-like family member d	AK028662|Cd300ld|217305|CD300 molecule-like family member d	AK041292|Cd300ld|217305|CD300 molecule-like family member d
mm9_v1_chr8_+_131591033_131591104	0.373466	FOXA2.p3	AK005764|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_001168369|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_029292|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	AK076548|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	BC147560|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene
mm9_v1_chr8_+_23081067_23081067	0.371859	FOXA2.p3	BC049553|Ccdc70|67929|coiled-coil domain containing 70	NM_026459|Ccdc70|67929|coiled-coil domain containing 70
mm9_v1_chr13_+_55885928_55886022	0.370438	FOXA2.p3	BC089518|Catsper3|76856|cation channel, sperm associated 3	AK014942|Catsper3|76856|cation channel, sperm associated 3	NM_029772|Catsper3|76856|cation channel, sperm associated 3	AY263400|Catsper3|76856|cation channel, sperm associated 3	HM179540|Catsper3|76856|cation channel, sperm associated 3	HM179541|Catsper3|76856|cation channel, sperm associated 3
mm9_v1_chr10_-_61970481_61970509	0.369132	FOXA2.p3	BC037076|Srgn|19073|serglycin	J04549|Srgn|19073|serglycin	AK157945|Srgn|19073|serglycin	M34603|Srgn|19073|serglycin	NM_011157|Srgn|19073|serglycin	X16133|Srgn|19073|serglycin	AK168124|Srgn|19073|serglycin	AK151357|Srgn|19073|serglycin
mm9_v1_chr7_+_97574821_97574821	0.368762	FOXA2.p3	NM_027298|Ccdc89|70054|coiled-coil domain containing 89
mm9_v1_chr8_+_23393912_23393912	0.36825	FOXA2.p3	AJ311311|Tpte|234129|transmembrane phosphatase with tensin homology	AJ311312|Tpte|234129|transmembrane phosphatase with tensin homology	AJ311313|Tpte|234129|transmembrane phosphatase with tensin homology	NM_199257|Tpte|234129|transmembrane phosphatase with tensin homology
mm9_v1_chr7_+_88006993_88006993	0.368129	FOXA2.p3	BC046961|Zscan2|22691|zinc finger and SCAN domain containing 2	NM_009553|Zscan2|22691|zinc finger and SCAN domain containing 2
mm9_v1_chr12_+_106440631_106440634	0.368107	FOXA2.p3	AF195492|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4	NM_013774|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4	BC145148|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4	BC145788|Tcl1b4|27380|T-cell leukemia/lymphoma 1B, 4
mm9_v1_chr8_+_77972592_77972689	0.367246	FOXA2.p3	AK005693|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	NM_001164235|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	NM_027944|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	BC117767|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	BC117768|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene
mm9_v1_chr10_-_94786634_94786766	0.366963	FOXA2.p3	AK052304|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK136561|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AJ224738|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	NM_009950|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK163112|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK144648|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain
mm9_v1_chr14_+_48740495_48740543	0.365444	FOXA2.p3	AK030564|Peli2|93834|pellino 2	AK045515|Peli2|93834|pellino 2	NM_033602|Peli2|93834|pellino 2
mm9_v1_chr10_-_24431855_24431964	0.364205	FOXA2.p3	J02700|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	NM_008813|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	BC050011|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1
mm9_v1_chr9_+_108382180_108382248	0.361812	FOXA2.p3	NM_008483|Lamb2|16779|laminin, beta 2	AK140351|Lamb2|16779|laminin, beta 2	AK158444|Lamb2|16779|laminin, beta 2
mm9_v1_chr16_+_90738690_90738714	0.360813	FOXA2.p3	AK158113|Mrap|77037|melanocortin 2 receptor accessory protein	BC027543|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chr14_-_11994524_11994548	0.359935	FOXA2.p3	AF055573|Fhit|14198|fragile histidine triad gene	NM_010210|Fhit|14198|fragile histidine triad gene	AF047699|Fhit|14198|fragile histidine triad gene
mm9_v1_chr11_+_99769233_99769265	0.359916	FOXA2.p3	AK014635|Krtap31-1|70831|keratin associated protein 31-1	NM_027568|Krtap31-1|70831|keratin associated protein 31-1	BC147672|Krtap31-1|70831|keratin associated protein 31-1	BC147678|Krtap31-1|70831|keratin associated protein 31-1
mm9_v1_chr13_+_23622912_23622975	0.359651	FOXA2.p3	NM_153173|Hist1h4h|69386|histone cluster 1, H4h	AK007642|Hist1h4h|69386|histone cluster 1, H4h	BC087952|Hist1h4h|69386|histone cluster 1, H4h	BC028550|Hist1h4h|69386|histone cluster 1, H4h	BC058529|Hist1h4h|69386|histone cluster 1, H4h
mm9_v1_chr15_+_82385501_82385543	0.3561	FOXA2.p3	BC026417|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	AK165474|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC089596|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	AK078880|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	NM_201360|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC139169|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC139170|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC145567|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12
mm9_v1_chr8_-_89409079_89409204	0.35469	FOXA2.p3	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr3_-_101728226_101728375	0.354065	FOXA2.p3	AK090352|Slc22a15|242126|solute carrier family 22 (organic anion/cation transporter), member 15	AK011679|Slc22a15|242126|solute carrier family 22 (organic anion/cation transporter), member 15	BC094925|Slc22a15|242126|solute carrier family 22 (organic anion/cation transporter), member 15	AK082482|Slc22a15|242126|solute carrier family 22 (organic anion/cation transporter), member 15	NM_001039371|Slc22a15|242126|solute carrier family 22 (organic anion/cation transporter), member 15
mm9_v1_chr17_+_26852581_26852657	0.353561	FOXA2.p3	AK030092|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	NM_029870|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK044760|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK020796|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132423|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132454|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr1_-_52784161_52784228	0.351161	FOXA2.p3	AK035995|Mfsd6|98682|major facilitator superfamily domain containing 6	NM_133829|Mfsd6|98682|major facilitator superfamily domain containing 6	NM_178081|Mfsd6|98682|major facilitator superfamily domain containing 6	AK171946|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr11_+_26287083_26287211	0.350438	FOXA2.p3	AF513619|Fancl|67030|Fanconi anemia, complementation group L	NM_025923|Fancl|67030|Fanconi anemia, complementation group L	AK011520|Fancl|67030|Fanconi anemia, complementation group L	AK168538|Fancl|67030|Fanconi anemia, complementation group L	AK008605|Fancl|67030|Fanconi anemia, complementation group L	AK011903|Fancl|67030|Fanconi anemia, complementation group L	AK017431|Fancl|67030|Fanconi anemia, complementation group L	AK020981|Fancl|67030|Fanconi anemia, complementation group L	AK076017|Fancl|67030|Fanconi anemia, complementation group L	AK018018|Fancl|67030|Fanconi anemia, complementation group L	AK011752|Fancl|67030|Fanconi anemia, complementation group L	BC032876|Fancl|67030|Fanconi anemia, complementation group L
mm9_v1_chr1_+_40637047_40637153	0.349773	FOXA2.p3	AK085681|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	AK135750|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	AK141534|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	NM_177084|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4	BC120543|Slc9a4|110895|solute carrier family 9 (sodium/hydrogen exchanger), member 4
mm9_v1_chr3_-_137644466_137644512	0.348591	FOXA2.p3	AF163255|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK145745|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK146180|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AF186023|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK079794|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	AK169584|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	BC014759|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1	NM_011932|Dapp1|26377|dual adaptor for phosphotyrosine and 3-phosphoinositides 1
mm9_v1_chr18_-_40378889_40378990	0.348377	FOXA2.p3	AK151425|Yipf5|67180|Yip1 domain family, member 5	AK151461|Yipf5|67180|Yip1 domain family, member 5	BC003317|Yipf5|67180|Yip1 domain family, member 5	AK160004|Yipf5|67180|Yip1 domain family, member 5	AK167953|Yipf5|67180|Yip1 domain family, member 5	AK172133|Yipf5|67180|Yip1 domain family, member 5
mm9_v1_chr2_+_152987262_152987297	0.345858	FOXA2.p3	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr2_+_59192308_59192366	0.344793	FOXA2.p3	AK021168|Pkp4|227937|plakophilin 4
mm9_v1_chr1_+_132762248_132762329	0.344588	FOXA2.p3	BC116674|Faim3|69169|Fas apoptotic inhibitory molecule 3	BC118505|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr17_+_8565260_8565260	0.343577	FOXA2.p3	NM_001161832|T2|21331|brachyury 2
mm9_v1_chr9_+_110379481_110379600	0.340437	FOXA2.p3	AK029776|Kif9|16578|kinesin family member 9	AK087008|Kif9|16578|kinesin family member 9	NM_001163569|Kif9|16578|kinesin family member 9	AJ132889|Kif9|16578|kinesin family member 9	BC115765|Kif9|16578|kinesin family member 9	AK029506|Kif9|16578|kinesin family member 9
mm9_v1_chrX_-_71618556_71618610	0.33893	FOXA2.p3	EU599043|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599044|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599045|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	BC027440|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	NM_145406|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr15_+_84022647_84022764	0.338365	FOXA2.p3	AK159740|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK039949|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	NM_178614|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK144975|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK041783|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK084395|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	BC119178|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	BC119180|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK086633|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK167806|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK161378|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK169066|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK169351|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK003990|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)	AK168510|Samm50|68653|sorting and assembly machinery component 50 homolog (S. cerevisiae)
mm9_v1_chr13_-_27482665_27482714	0.337123	FOXA2.p3	AF525155|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC100329|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC138199|Prl2b1|66392|prolactin family 2, subfamily b, member 1	BC111112|Prl2b1|66392|prolactin family 2, subfamily b, member 1	AK009863|Prl2b1|66392|prolactin family 2, subfamily b, member 1	AK005411|Prl2b1|66392|prolactin family 2, subfamily b, member 1	NM_025532|Prl2b1|66392|prolactin family 2, subfamily b, member 1
mm9_v1_chrY_-_1976583_1976583	0.333803	FOXA2.p3	EU315689|Gm6026|547210|predicted gene 6026	NM_001113395|Gm16501|100042840|predicted gene 16501	NM_001177569|Gm6026|547210|predicted gene 6026
mm9_v1_chr3_+_19794876_19794911	0.331005	FOXA2.p3	BC023403|4632415L05Rik|70808|RRS1 ribosome biogenesis regulator homolog pseudogene	BC037267|4632415L05Rik|70808|RRS1 ribosome biogenesis regulator homolog pseudogene	AK014580|4632415L05Rik|70808|RRS1 ribosome biogenesis regulator homolog pseudogene
mm9_v1_chr4_+_46485096_46485220	0.329578	FOXA2.p3	
mm9_v1_chr7_-_120532071_120532086	0.329552	FOXA2.p3	BC099456|Pth|19226|parathyroid hormone	AK138677|Pth|19226|parathyroid hormone	NM_020623|Pth|19226|parathyroid hormone
mm9_v1_chr11_-_59623089_59623359	0.329117	FOXA2.p3	AK136071|Flcn|216805|folliculin	BC025820|Flcn|216805|folliculin	NM_146018|Flcn|216805|folliculin	AK148216|Flcn|216805|folliculin	AK161460|Flcn|216805|folliculin	AK039106|Flcn|216805|folliculin	AK080933|Flcn|216805|folliculin	AK172245|Flcn|216805|folliculin
mm9_v1_chr11_-_4494815_4494822	0.328344	FOXA2.p3	NM_028860|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr2_-_32639934_32639947	0.325183	FOXA2.p3	AK006127|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene
mm9_v1_chr1_-_99873795_99873812	0.321826	FOXA2.p3	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr13_+_38436987_38437005	0.321521	FOXA2.p3	AK041210|Bmp6|12161|bone morphogenetic protein 6
mm9_v1_chr4_-_43512476_43512545	0.319683	FOXA2.p3	AK087493|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	BC080700|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	AK153880|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	NM_001013377|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene
mm9_v1_chr9_+_108382255_108382288	0.318455	FOXA2.p3	BC026051|Lamb2|16779|laminin, beta 2
mm9_v1_chr11_+_53270779_53270814	0.316654	FOXA2.p3	AK134332|Shroom1|71774|shroom family member 1	AK004934|Shroom1|71774|shroom family member 1	BC031598|Shroom1|71774|shroom family member 1
mm9_v1_chr7_-_97052120_97052138	0.314862	FOXA2.p3	AK014876|Ccdc81|70884|coiled-coil domain containing 81	BC127049|Ccdc81|70884|coiled-coil domain containing 81	BC152307|Ccdc81|70884|coiled-coil domain containing 81	BC152308|Ccdc81|70884|coiled-coil domain containing 81	AK029544|Ccdc81|70884|coiled-coil domain containing 81	NM_001162979|Ccdc81|70884|coiled-coil domain containing 81
mm9_v1_chr6_+_116287992_116288071	0.312252	FOXA2.p3	AK154976|March8|71779|membrane-associated ring finger (C3HC4) 8	BC050908|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr18_-_78375872_78375910	0.310644	FOXA2.p3	AF367359|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2	NM_001110273|Slc14a2|27411|solute carrier family 14 (urea transporter), member 2
mm9_v1_chr4_-_144681825_144681852	0.305529	FOXA2.p3	BC037490|Vps13d|230895|vacuolar protein sorting 13 D (yeast)
mm9_v1_chr16_-_95751971_95751971	0.305082	FOXA2.p3	AB073078|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related	AB073079|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related	AB073080|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related	NM_133659|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm9_v1_chrX_+_104863302_104863302	0.304548	FOXA2.p3	AF516208|Tbx22|245572|T-box 22	NM_181319|Tbx22|245572|T-box 22
mm9_v1_chr6_-_89795530_89795608	0.298924	FOXA2.p3	NM_053221|Vmn1r42|113848|vomeronasal 1 receptor 42	BC125372|Vmn1r42|113848|vomeronasal 1 receptor 42
mm9_v1_chr3_+_101266000_101266048	0.298456	FOXA2.p3	AK012857|Igsf3|78908|immunoglobulin superfamily, member 3
mm9_v1_chr7_+_138317915_138317916	0.298217	FOXA2.p3	AK035662|5430419D17Rik|71395|RIKEN cDNA 5430419D17 gene	NM_175166|5430419D17Rik|71395|RIKEN cDNA 5430419D17 gene
mm9_v1_chr6_+_116288073_116288073	0.297597	FOXA2.p3	AK165647|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr2_+_145685882_145685886	0.296628	FOXA2.p3	AK163047|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr10_-_61960613_61960625	0.295999	FOXA2.p3	AK087960|Srgn|19073|serglycin
mm9_v1_chr16_-_85862579_85862641	0.29536	FOXA2.p3	AK046558|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)	AK164560|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr11_-_120092784_120092898	0.294824	FOXA2.p3	AK034741|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK162948|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK013668|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene
mm9_v1_chr2_+_142904128_142904227	0.294727	FOXA2.p3	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr11_-_69479553_69479654	0.293773	FOXA2.p3	NM_009853|Cd68|12514|CD68 antigen	AK170443|Cd68|12514|CD68 antigen	BC021637|Cd68|12514|CD68 antigen	AK002264|Cd68|12514|CD68 antigen	X68273|Cd68|12514|CD68 antigen
mm9_v1_chr1_-_157883424_157883442	0.293686	FOXA2.p3	BC010841|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr1_+_174065263_174065366	0.291672	FOXA2.p3	AK218140|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr3_+_101180976_101181070	0.288894	FOXA2.p3	AK083000|Igsf3|78908|immunoglobulin superfamily, member 3	AK084011|Igsf3|78908|immunoglobulin superfamily, member 3	AK129151|Igsf3|78908|immunoglobulin superfamily, member 3	NM_207205|Igsf3|78908|immunoglobulin superfamily, member 3
mm9_v1_chr13_+_54201964_54202052	0.287915	FOXA2.p3	AK084725|Sfxn1|14057|sideroflexin 1	AK140048|Sfxn1|14057|sideroflexin 1
mm9_v1_chrX_+_35688564_35688695	0.285169	FOXA2.p3	AK004245|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm9_v1_chr1_-_167390568_167390623	0.284443	FOXA2.p3	NM_028759|Dcaf6|74106|DDB1 and CUL4 associated factor 6
mm9_v1_chr7_-_54744926_54744955	0.282041	FOXA2.p3	BC064040|Mrgpra2a|668727|MAS-related GPR, member A2A	NM_153101|Mrgpra2b|235712|MAS-related GPR, member A2B	AK156116|Mrgpra2b|235712|MAS-related GPR, member A2B
mm9_v1_chr3_-_9833502_9833678	0.281894	FOXA2.p3	BC145328|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145761|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145763|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK172106|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156986|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK040230|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK041695|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK089329|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156000|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_001195031|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_053182|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1
mm9_v1_chr5_-_97821348_97821397	0.281888	FOXA2.p3	AK135863|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	BC139104|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	BC145776|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	NM_001033191|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	AK133248|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit	EU192141|Naa11|97243|N(alpha)-acetyltransferase 11, NatA catalytic subunit
mm9_v1_chr9_-_109190173_109190189	0.279873	FOXA2.p3	BC099372|Fbxw14|50757|F-box and WD-40 domain protein 14	BC145098|Fbxw14|50757|F-box and WD-40 domain protein 14	AK135771|Fbxw14|50757|F-box and WD-40 domain protein 14	BC138018|Fbxw14|50757|F-box and WD-40 domain protein 14	AK135682|Fbxw14|50757|F-box and WD-40 domain protein 14	AK166611|Fbxw14|50757|F-box and WD-40 domain protein 14	AK166612|Fbxw14|50757|F-box and WD-40 domain protein 14	AK087709|Fbxw14|50757|F-box and WD-40 domain protein 14	NM_015793|Fbxw14|50757|F-box and WD-40 domain protein 14
mm9_v1_chr10_+_19890580_19890589	0.279837	FOXA2.p3	AK138516|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene	AK138667|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene
mm9_v1_chr14_-_61877218_61877326	0.276652	FOXA2.p3	BC138960|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	BC138961|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AB024922|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AK132610|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AF282901|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	NM_011892|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)
mm9_v1_chr2_-_24775083_24775154	0.276618	FOXA2.p3	AK054555|Ehmt1|77683|euchromatic histone methyltransferase 1	AK052174|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_001012518|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_001109686|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_001109687|Ehmt1|77683|euchromatic histone methyltransferase 1	NM_172545|Ehmt1|77683|euchromatic histone methyltransferase 1	AK084994|Ehmt1|77683|euchromatic histone methyltransferase 1	AK043898|Ehmt1|77683|euchromatic histone methyltransferase 1	AK082062|Ehmt1|77683|euchromatic histone methyltransferase 1	AB205007|Ehmt1|77683|euchromatic histone methyltransferase 1
mm9_v1_chr4_-_41464365_41464365	0.276608	FOXA2.p3	AB231294|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene	NM_001048005|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene
mm9_v1_chr11_-_70432695_70432695	0.274157	FOXA2.p3	NM_009603|Chrne|11448|cholinergic receptor, nicotinic, epsilon polypeptide	X55718|Chrne|11448|cholinergic receptor, nicotinic, epsilon polypeptide
mm9_v1_chr18_+_37480034_37480222	0.273203	FOXA2.p3	AK028661|Pcdhb5|93876|protocadherin beta 5	NM_053130|Pcdhb5|93876|protocadherin beta 5	AK049825|Pcdhb5|93876|protocadherin beta 5	BC141147|Pcdhb5|93876|protocadherin beta 5	AY013787|Pcdhb5|93876|protocadherin beta 5
mm9_v1_chr1_+_7162595_7162622	0.271864	FOXA2.p3	AK018402|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr8_+_108417466_108417479	0.269406	FOXA2.p3	BC100315|Nrn1l|234700|neuritin 1-like	AK080711|Nrn1l|234700|neuritin 1-like	AK090312|Nrn1l|234700|neuritin 1-like	NM_175024|Nrn1l|234700|neuritin 1-like	DQ176852|Nrn1l|234700|neuritin 1-like
mm9_v1_chr12_-_32184404_32184480	0.268345	FOXA2.p3	BC019529|Cbll1|104836|Casitas B-lineage lymphoma-like 1	NM_134048|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AK049141|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AK051737|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AK166017|Cbll1|104836|Casitas B-lineage lymphoma-like 1	AF167441|Cbll1|104836|Casitas B-lineage lymphoma-like 1
mm9_v1_chr13_+_27290771_27290771	0.268126	FOXA2.p3	AK014980|Prl3c1|27372|prolactin family 3, subfamily c, member 1	NM_001163218|Prl3c1|27372|prolactin family 3, subfamily c, member 1
mm9_v1_chr10_-_116333934_116333934	0.268095	FOXA2.p3	AK144383|Gm239|237558|predicted gene 239	AK144411|Gm239|237558|predicted gene 239	NM_001033333|Gm239|237558|predicted gene 239
mm9_v1_chr5_-_33590505_33590587	0.267809	FOXA2.p3	
mm9_v1_chr4_+_89885510_89885510	0.267326	FOXA2.p3	AF290196|Zfp352|236537|zinc finger protein 352	NM_153102|Zfp352|236537|zinc finger protein 352
mm9_v1_chr6_-_120307360_120307396	0.266802	FOXA2.p3	BC018387|Ccdc77|67200|coiled-coil domain containing 77	AK012598|Ccdc77|67200|coiled-coil domain containing 77	NM_026028|Ccdc77|67200|coiled-coil domain containing 77	AK010251|Ccdc77|67200|coiled-coil domain containing 77
mm9_v1_chr2_+_154839149_154839305	0.264557	FOXA2.p3	S70326|a|50518|nonagouti	L06451|a|50518|nonagouti	S70394|a|50518|nonagouti	L06941|a|50518|nonagouti	NM_015770|a|50518|nonagouti
mm9_v1_chrX_+_30245481_30245481	0.261243	FOXA2.p3	NM_001085553|Gm10921|668963|predicted gene 10921
mm9_v1_chr13_-_61037960_61037985	0.259053	FOXA2.p3	NM_007796|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha
mm9_v1_chr7_+_50663608_50663649	0.258736	FOXA2.p3	AK156766|Siglecg|243958|sialic acid binding Ig-like lectin G	AK036698|Siglecg|243958|sialic acid binding Ig-like lectin G	BC114981|Siglecg|243958|sialic acid binding Ig-like lectin G	AK042488|Siglecg|243958|sialic acid binding Ig-like lectin G	NM_172900|Siglecg|243958|sialic acid binding Ig-like lectin G
mm9_v1_chr15_+_35301320_35301357	0.256905	FOXA2.p3	BC158052|Vps13b|666173|vacuolar protein sorting 13B (yeast)
mm9_v1_chr6_+_18816317_18816373	0.255195	FOXA2.p3	BC049731|Ankrd7|75196|ankyrin repeat domain 7	NM_001167757|Ankrd7|75196|ankyrin repeat domain 7	NM_029202|Ankrd7|75196|ankyrin repeat domain 7	AK077080|Ankrd7|75196|ankyrin repeat domain 7	AK015948|Ankrd7|75196|ankyrin repeat domain 7
mm9_v1_chr5_+_30969259_30969346	0.252061	FOXA2.p3	AF012709|Cenpa|12615|centromere protein A	NM_007681|Cenpa|12615|centromere protein A	AK040313|Cenpa|12615|centromere protein A	AK041138|Cenpa|12615|centromere protein A	AK089033|Cenpa|12615|centromere protein A	AK053763|Cenpa|12615|centromere protein A	AK010718|Cenpa|12615|centromere protein A	BC011038|Cenpa|12615|centromere protein A	AK011399|Cenpa|12615|centromere protein A	BC012280|Cenpa|12615|centromere protein A
mm9_v1_chr5_+_151325197_151325232	0.251391	FOXA2.p3	AK148272|Brca2|12190|breast cancer 2	NM_009765|Brca2|12190|breast cancer 2	AK087379|Brca2|12190|breast cancer 2	NM_001081001|Brca2|12190|breast cancer 2	AK164598|Brca2|12190|breast cancer 2	U65594|Brca2|12190|breast cancer 2	AK145017|Brca2|12190|breast cancer 2
mm9_v1_chr14_+_96280472_96280516	0.251306	FOXA2.p3	BC049573|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK014987|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	NM_025733|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK005846|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene
mm9_v1_chr1_+_155599081_155599148	0.250861	FOXA2.p3	AK053125|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	AK054205|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm9_v1_chr15_-_83895778_83895778	0.250663	FOXA2.p3	BC065111|Efcab6|77627|EF-hand calcium binding domain 6	NM_029946|Efcab6|77627|EF-hand calcium binding domain 6
mm9_v1_chr1_-_13364092_13364163	0.250182	FOXA2.p3	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chrX_-_104035877_104035981	0.249349	FOXA2.p3	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr5_-_24781987_24782111	0.2489	FOXA2.p3	AK077567|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3
mm9_v1_chrX_-_163701719_163701737	0.246046	FOXA2.p3	BC132054|Tlr8|170744|toll-like receptor 8	NM_133212|Tlr8|170744|toll-like receptor 8	AY035890|Tlr8|170744|toll-like receptor 8
mm9_v1_chr1_-_153317422_153317565	0.243654	FOXA2.p3	AK211660|Rnf2|19821|ring finger protein 2
mm9_v1_chr2_-_30270970_30271290	0.24348	FOXA2.p3	X85983|Crat|12908|carnitine acetyltransferase	BC006668|Crat|12908|carnitine acetyltransferase	AK041431|Crat|12908|carnitine acetyltransferase	AK170740|Crat|12908|carnitine acetyltransferase	NM_007760|Crat|12908|carnitine acetyltransferase	AK132179|Crat|12908|carnitine acetyltransferase
mm9_v1_chr2_+_30271550_30271576	0.242786	FOXA2.p3	AK031591|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	NM_138748|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr5_-_87911282_87911282	0.242645	FOXA2.p3	BC048920|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	BC058786|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2	NM_001024148|Ugt2a2|552899|UDP glucuronosyltransferase 2 family, polypeptide A2
mm9_v1_chr9_-_109242147_109242172	0.24205	FOXA2.p3	AF176528|Fbxw14|50757|F-box and WD-40 domain protein 14	BC084592|Fbxw28|668758|F-box and WD-40 domain protein 28	AK143322|Fbxw28|668758|F-box and WD-40 domain protein 28	AK162190|Fbxw28|668758|F-box and WD-40 domain protein 28	NM_001177419|Fbxw28|668758|F-box and WD-40 domain protein 28	NM_001177420|Fbxw28|668758|F-box and WD-40 domain protein 28
mm9_v1_chr2_-_32639915_32639924	0.240982	FOXA2.p3	BC118617|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene	BC121825|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene	NM_025619|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene
mm9_v1_chr3_-_142054771_142054814	0.233013	FOXA2.p3	DQ177283|Pdlim5|56376|PDZ and LIM domain 5	HM369794|Pdlim5|56376|PDZ and LIM domain 5	HM369795|Pdlim5|56376|PDZ and LIM domain 5	HM369796|Pdlim5|56376|PDZ and LIM domain 5	HM369797|Pdlim5|56376|PDZ and LIM domain 5	HM369798|Pdlim5|56376|PDZ and LIM domain 5	NM_001190857|Pdlim5|56376|PDZ and LIM domain 5	NM_022554|Pdlim5|56376|PDZ and LIM domain 5	AB016587|Pdlim5|56376|PDZ and LIM domain 5
mm9_v1_chr6_+_64992810_64992853	0.232733	FOXA2.p3	AK134442|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK011724|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK122454|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr4_-_25169970_25170022	0.232693	FOXA2.p3	AF083394|Fhl5|57756|four and a half LIM domains 5	AK006414|Fhl5|57756|four and a half LIM domains 5	BC048473|Fhl5|57756|four and a half LIM domains 5	NM_021318|Fhl5|57756|four and a half LIM domains 5
mm9_v1_chr1_-_168339909_168339980	0.231448	FOXA2.p3	AK031716|Pogk|71592|pogo transposable element with KRAB domain	BC072587|Pogk|71592|pogo transposable element with KRAB domain	AK048067|Pogk|71592|pogo transposable element with KRAB domain	AK048752|Pogk|71592|pogo transposable element with KRAB domain	AK053898|Pogk|71592|pogo transposable element with KRAB domain	NM_001142948|Pogk|71592|pogo transposable element with KRAB domain	NM_175170|Pogk|71592|pogo transposable element with KRAB domain
mm9_v1_chr17_-_46290450_46290465	0.230878	FOXA2.p3	AK004224|Mad2l1bp|66591|MAD2L1 binding protein	AK007974|Mad2l1bp|66591|MAD2L1 binding protein	BC005768|Mad2l1bp|66591|MAD2L1 binding protein	AK220322|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr2_+_152495196_152495240	0.229439	FOXA2.p3	NM_001159551|H13|14950|histocompatibility 13	NM_001159552|H13|14950|histocompatibility 13	NM_001159553|H13|14950|histocompatibility 13	NM_010376|H13|14950|histocompatibility 13	AJ345032|H13|14950|histocompatibility 13	BC056977|H13|14950|histocompatibility 13	DQ168449|H13|14950|histocompatibility 13	AK012600|H13|14950|histocompatibility 13	AK007664|H13|14950|histocompatibility 13	AK004690|H13|14950|histocompatibility 13	AK019877|H13|14950|histocompatibility 13	AK039008|H13|14950|histocompatibility 13	AK049101|H13|14950|histocompatibility 13	AK159176|H13|14950|histocompatibility 13	AK028109|H13|14950|histocompatibility 13	AF483214|H13|14950|histocompatibility 13	AK080966|H13|14950|histocompatibility 13	AK169922|H13|14950|histocompatibility 13
mm9_v1_chr19_+_23240506_23240595	0.228902	FOXA2.p3	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr9_-_109648600_109648602	0.228281	FOXA2.p3	AK054298|Fbxw26|382109|F-box and WD-40 domain protein 26	BC132114|Fbxw26|382109|F-box and WD-40 domain protein 26	BC132304|Fbxw26|382109|F-box and WD-40 domain protein 26	NM_198674|Fbxw26|382109|F-box and WD-40 domain protein 26
mm9_v1_chr18_-_44334726_44334726	0.228174	FOXA2.p3	AK020535|Spinkl|77424|serine protease inhibitor, Kazal type-like	NM_183123|Spinkl|77424|serine protease inhibitor, Kazal type-like
mm9_v1_chr8_+_97269489_97269622	0.226044	FOXA2.p3	AF052505|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155083|Ccl22|20299|chemokine (C-C motif) ligand 22	AK156627|Ccl22|20299|chemokine (C-C motif) ligand 22	AK170080|Ccl22|20299|chemokine (C-C motif) ligand 22	NM_009137|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155764|Ccl22|20299|chemokine (C-C motif) ligand 22	BC012658|Ccl22|20299|chemokine (C-C motif) ligand 22	AF076596|Ccl22|20299|chemokine (C-C motif) ligand 22	AJ238238|Ccl22|20299|chemokine (C-C motif) ligand 22	AF163476|Ccl22|20299|chemokine (C-C motif) ligand 22
mm9_v1_chr4_+_143125856_143125856	0.225545	FOXA2.p3	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040
mm9_v1_chr4_+_143141602_143141602	0.225545	FOXA2.p3	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040
mm9_v1_chr9_-_32348863_32349036	0.224851	FOXA2.p3	BC138791|Fli1|14247|Friend leukemia integration 1	BC138792|Fli1|14247|Friend leukemia integration 1	AK042111|Fli1|14247|Friend leukemia integration 1	AK154714|Fli1|14247|Friend leukemia integration 1	NM_008026|Fli1|14247|Friend leukemia integration 1	AK036655|Fli1|14247|Friend leukemia integration 1	X59421|Fli1|14247|Friend leukemia integration 1
mm9_v1_chr2_-_120862405_120862570	0.22398	FOXA2.p3	AK158219|Epb4.2|13828|erythrocyte protein band 4.2	AK158370|Epb4.2|13828|erythrocyte protein band 4.2	AK165288|Epb4.2|13828|erythrocyte protein band 4.2	AK172410|Epb4.2|13828|erythrocyte protein band 4.2	AK158247|Epb4.2|13828|erythrocyte protein band 4.2	BC053739|Epb4.2|13828|erythrocyte protein band 4.2	AK143841|Epb4.2|13828|erythrocyte protein band 4.2	L35933|Epb4.2|13828|erythrocyte protein band 4.2	BC066194|Epb4.2|13828|erythrocyte protein band 4.2	BC066806|Epb4.2|13828|erythrocyte protein band 4.2	NM_013513|Epb4.2|13828|erythrocyte protein band 4.2	U04055|Epb4.2|13828|erythrocyte protein band 4.2	AK133896|Epb4.2|13828|erythrocyte protein band 4.2	AK137484|Epb4.2|13828|erythrocyte protein band 4.2
mm9_v1_chr11_+_19879583_19879598	0.223955	FOXA2.p3	
mm9_v1_chr17_-_46290499_46290503	0.222742	FOXA2.p3	AK156569|Mad2l1bp|66591|MAD2L1 binding protein	NM_025649|Mad2l1bp|66591|MAD2L1 binding protein
mm9_v1_chr5_+_145965427_145965536	0.222597	FOXA2.p3	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr3_-_36470904_36470919	0.222515	FOXA2.p3	NM_009828|Ccna2|12428|cyclin A2	AK044924|Ccna2|12428|cyclin A2
mm9_v1_chr16_+_90738780_90738808	0.221631	FOXA2.p3	AY079153|Mrap|77037|melanocortin 2 receptor accessory protein	AY079154|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chrX_-_35065833_35065833	0.220706	FOXA2.p3	AJ972671|Rhox4g|664608|reproductive homeobox 4G	NM_001039698|Rhox4g|664608|reproductive homeobox 4G
mm9_v1_chr9_-_121748578_121748578	0.21771	FOXA2.p3	NM_028384|Ccdc13|434446|coiled-coil domain containing 13
mm9_v1_chr5_+_31916313_31916404	0.215317	FOXA2.p3	NM_025796|Mrpl33|66845|mitochondrial ribosomal protein L33	AB049651|Mrpl33|66845|mitochondrial ribosomal protein L33	AK167883|Mrpl33|66845|mitochondrial ribosomal protein L33	AK002421|Mrpl33|66845|mitochondrial ribosomal protein L33	AK008431|Mrpl33|66845|mitochondrial ribosomal protein L33	AK021173|Mrpl33|66845|mitochondrial ribosomal protein L33	AK165856|Mrpl33|66845|mitochondrial ribosomal protein L33	BC059722|Mrpl33|66845|mitochondrial ribosomal protein L33	BC051471|Mrpl33|66845|mitochondrial ribosomal protein L33	BC027018|Mrpl33|66845|mitochondrial ribosomal protein L33	BC037363|Mrpl33|66845|mitochondrial ribosomal protein L33	BC055724|Mrpl33|66845|mitochondrial ribosomal protein L33	AK041771|Mrpl33|66845|mitochondrial ribosomal protein L33	BC006029|Mrpl33|66845|mitochondrial ribosomal protein L33
mm9_v1_chr17_-_66234633_66234667	0.215316	FOXA2.p3	AK145387|Ralbp1|19765|ralA binding protein 1	BC028516|Ralbp1|19765|ralA binding protein 1	AK133613|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr17_+_46298019_46298034	0.212661	FOXA2.p3	BC049089|Gtpbp2|56055|GTP binding protein 2	BC051958|Gtpbp2|56055|GTP binding protein 2	AK146415|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chr7_-_34926055_34926067	0.20939	FOXA2.p3	AK213025|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chr4_+_143101214_143101245	0.20879	FOXA2.p3	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040	BC099534|Gm13043|545693|predicted gene 13043	NM_001039595|Gm13043|545693|predicted gene 13043
mm9_v1_chrX_+_160707362_160707541	0.20665	FOXA2.p3	AK134541|Pir|69656|pirin	NM_027153|Pir|69656|pirin	AK138314|Pir|69656|pirin	AK009757|Pir|69656|pirin	AK151301|Pir|69656|pirin	AK082922|Pir|69656|pirin	BC024062|Pir|69656|pirin	AK090023|Pir|69656|pirin
mm9_v1_chrX_-_35022192_35022192	0.206363	FOXA2.p3	AJ972670|Rhox4f|636177|reproductive homeobox 4F	NM_001039696|Rhox4f|636177|reproductive homeobox 4F
mm9_v1_chr15_-_103085703_103085858	0.205581	FOXA2.p3	BC062171|Nfe2|18022|nuclear factor, erythroid derived 2	NM_008685|Nfe2|18022|nuclear factor, erythroid derived 2	L09600|Nfe2|18022|nuclear factor, erythroid derived 2
mm9_v1_chr2_+_80193710_80193811	0.205377	FOXA2.p3	
mm9_v1_chr3_-_96044172_96044256	0.202945	FOXA2.p3	NM_178212|Hist2h2aa2|319192|histone cluster 2, H2aa2	Z30940|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC010564|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC053966|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC062255|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK002725|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK006728|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_013549|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147778|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147781|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC089519|Hist2h2aa1|15267|histone cluster 2, H2aa1
mm9_v1_chr5_-_44162032_44162072	0.202539	FOXA2.p3	BC023291|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr11_-_101087738_101087767	0.198032	FOXA2.p3	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chrX_-_101866402_101866402	0.196725	FOXA2.p3	AK132304|Zdhhc15|108672|zinc finger, DHHC domain containing 15	NM_175358|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr11_-_79337178_79337240	0.196422	FOXA2.p3	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr1_-_36502079_36502124	0.196367	FOXA2.p3	AK142024|Lman2l|214895|lectin, mannose-binding 2-like	BC046969|Lman2l|214895|lectin, mannose-binding 2-like	NM_001013374|Lman2l|214895|lectin, mannose-binding 2-like	BC027226|Lman2l|214895|lectin, mannose-binding 2-like	AK158015|Lman2l|214895|lectin, mannose-binding 2-like
mm9_v1_chr6_+_64992584_64992660	0.195786	FOXA2.p3	NM_007958|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	X69942|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr18_-_40378992_40378996	0.195745	FOXA2.p3	BC055301|Yipf5|67180|Yip1 domain family, member 5
mm9_v1_chr16_-_36071600_36071716	0.19454	FOXA2.p3	AK009946|Fam162a|70186|family with sequence similarity 162, member A	NM_027342|Fam162a|70186|family with sequence similarity 162, member A	BC010826|Fam162a|70186|family with sequence similarity 162, member A	AK033568|Fam162a|70186|family with sequence similarity 162, member A
mm9_v1_chr3_+_137530830_137530868	0.193752	FOXA2.p3	BC117717|Dnajb14|70604|DnaJ (Hsp40) homolog, subfamily B, member 14	BC117718|Dnajb14|70604|DnaJ (Hsp40) homolog, subfamily B, member 14	AK160961|Dnajb14|70604|DnaJ (Hsp40) homolog, subfamily B, member 14
mm9_v1_chrX_+_19636666_19636695	0.193231	FOXA2.p3	AK011202|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7	AB040710|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7	AB046929|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7	NM_021715|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7
mm9_v1_chr5_-_65351226_65351309	0.193141	FOXA2.p3	AK137502|Tlr6|21899|toll-like receptor 6	NM_011604|Tlr6|21899|toll-like receptor 6	BC055366|Tlr6|21899|toll-like receptor 6	AK154253|Tlr6|21899|toll-like receptor 6
mm9_v1_chr11_-_78020699_78020746	0.191585	FOXA2.p3	
mm9_v1_chr1_-_135586436_135586684	0.190596	FOXA2.p3	AK088503|Lax1|240754|lymphocyte transmembrane adaptor 1	AK040834|Lax1|240754|lymphocyte transmembrane adaptor 1	BC042765|Lax1|240754|lymphocyte transmembrane adaptor 1	NM_172842|Lax1|240754|lymphocyte transmembrane adaptor 1	NM_001159649|Lax1|240754|lymphocyte transmembrane adaptor 1
mm9_v1_chr9_+_44206258_44206258	0.19005	FOXA2.p3	BC075655|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_008063|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr5_-_137969610_137969651	0.189563	FOXA2.p3	
mm9_v1_chr3_-_10331334_10331440	0.189362	FOXA2.p3	BC055722|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AF042730|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160467|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK083238|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK145472|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK011770|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160203|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK165977|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	BC049080|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK078406|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK152774|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK147778|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK153457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK168457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	NM_018864|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1
mm9_v1_chr4_+_118081908_118082012	0.187695	FOXA2.p3	AK011080|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_020000|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_173719|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK147032|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK005422|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK148025|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC051683|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK008759|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC021870|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AB041805|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm9_v1_chr4_+_143947866_143947866	0.187566	FOXA2.p3	BC100406|Gm13119|433779|predicted gene 13119	NM_001034101|Gm13119|433779|predicted gene 13119
mm9_v1_chr19_-_6932673_6932702	0.184595	FOXA2.p3	BC151001|Ccdc88b|78317|coiled-coil domain containing 88B	BC151009|Ccdc88b|78317|coiled-coil domain containing 88B	BC157946|Ccdc88b|78317|coiled-coil domain containing 88B	NM_001081291|Ccdc88b|78317|coiled-coil domain containing 88B
mm9_v1_chr5_+_88805132_88805132	0.180409	FOXA2.p3	AK017352|Amtn|71421|amelotin	NM_027793|Amtn|71421|amelotin
mm9_v1_chr11_+_46564012_46564012	0.176907	FOXA2.p3	AK133466|Havcr1|171283|hepatitis A virus cellular receptor 1	NM_001166631|Havcr1|171283|hepatitis A virus cellular receptor 1
mm9_v1_chr3_-_35828995_35828995	0.176277	FOXA2.p3	AK139845|Dcun1d1|114893|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	NM_033623|Dcun1d1|114893|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)
mm9_v1_chr12_+_85983845_85983845	0.175723	FOXA2.p3	BC103771|Vrtn|432677|vertebrae development homolog (pig)	NM_001033776|Vrtn|432677|vertebrae development homolog (pig)
mm9_v1_chr8_+_68910191_68910205	0.174447	FOXA2.p3	AK036489|March1|72925|membrane-associated ring finger (C3HC4) 1	AK089040|March1|72925|membrane-associated ring finger (C3HC4) 1	AK152592|March1|72925|membrane-associated ring finger (C3HC4) 1	AK163081|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166375|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr8_+_72676676_72676679	0.172384	FOXA2.p3	BC045147|Mef2b|17259|myocyte enhancer factor 2B	NM_001045484|Mef2b|17259|myocyte enhancer factor 2B	NM_008578|Mef2b|17259|myocyte enhancer factor 2B	D87833|Mef2b|17259|myocyte enhancer factor 2B	D87834|Mef2b|17259|myocyte enhancer factor 2B	D87835|Mef2b|17259|myocyte enhancer factor 2B	D87836|Mef2b|17259|myocyte enhancer factor 2B
mm9_v1_chr10_-_114799212_114799324	0.171298	FOXA2.p3	AK136778|Tmem19|67226|transmembrane protein 19	AK170143|Tmem19|67226|transmembrane protein 19	AK171087|Tmem19|67226|transmembrane protein 19	AK018383|Tmem19|67226|transmembrane protein 19	AK155275|Tmem19|67226|transmembrane protein 19	AK042426|Tmem19|67226|transmembrane protein 19	AK079735|Tmem19|67226|transmembrane protein 19	BC016895|Tmem19|67226|transmembrane protein 19	AK036228|Tmem19|67226|transmembrane protein 19	AK138931|Tmem19|67226|transmembrane protein 19	NM_133683|Tmem19|67226|transmembrane protein 19	AK034298|Tmem19|67226|transmembrane protein 19
mm9_v1_chr4_-_94645735_94645794	0.169324	FOXA2.p3	AK164103|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK081684|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK145221|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK166402|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC150946|Mysm1|320713|myb-like, SWIRM and MPN domains 1	BC151172|Mysm1|320713|myb-like, SWIRM and MPN domains 1	AK043802|Mysm1|320713|myb-like, SWIRM and MPN domains 1	NM_177239|Mysm1|320713|myb-like, SWIRM and MPN domains 1
mm9_v1_chr18_-_40379041_40379060	0.168417	FOXA2.p3	NM_023311|Yipf5|67180|Yip1 domain family, member 5
mm9_v1_chr18_-_60432920_60432925	0.163069	FOXA2.p3	BC150900|Gm4841|225594|predicted gene 4841	NM_001034859|Gm4841|225594|predicted gene 4841	AK156469|Gm4841|225594|predicted gene 4841
mm9_v1_chr14_+_69984344_69984396	0.162339	FOXA2.p3	AK195341|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK213430|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK218892|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK202804|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4
mm9_v1_chr1_-_66981900_66981939	0.162217	FOXA2.p3	BC059087|Myl1|17901|myosin, light polypeptide 1	AK009938|Myl1|17901|myosin, light polypeptide 1	NM_001113387|Myl1|17901|myosin, light polypeptide 1
mm9_v1_chr8_+_3470861_3470861	0.158374	FOXA2.p3	BC050809|1700019B03Rik|76406|RIKEN cDNA 1700019B03 gene	NM_029598|1700019B03Rik|76406|RIKEN cDNA 1700019B03 gene
mm9_v1_chr8_+_74743620_74743671	0.158341	FOXA2.p3	AK075976|Fam32a|67922|family with sequence similarity 32, member A	NM_026455|Fam32a|67922|family with sequence similarity 32, member A	AB041658|Fam32a|67922|family with sequence similarity 32, member A	AK007524|Fam32a|67922|family with sequence similarity 32, member A	AK011922|Fam32a|67922|family with sequence similarity 32, member A	AK008285|Fam32a|67922|family with sequence similarity 32, member A	AK008336|Fam32a|67922|family with sequence similarity 32, member A	AK082792|Fam32a|67922|family with sequence similarity 32, member A	AK150416|Fam32a|67922|family with sequence similarity 32, member A	BC085487|Fam32a|67922|family with sequence similarity 32, member A
mm9_v1_chr6_-_40469482_40469510	0.15702	FOXA2.p3	AK029780|Prss37|67690|protease, serine, 37	AK006028|Prss37|67690|protease, serine, 37	NM_026317|Prss37|67690|protease, serine, 37	AK016088|Prss37|67690|protease, serine, 37
mm9_v1_chr6_-_83267540_83267619	0.154341	FOXA2.p3	J04627|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK076801|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK076019|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK159680|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK166262|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	BC019511|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK152249|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	AK165840|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase	NM_008638|Mthfd2|17768|methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
mm9_v1_chr16_-_29541568_29541568	0.153031	FOXA2.p3	BC048410|Atp13a4|224079|ATPase type 13A4	NM_001164612|Atp13a4|224079|ATPase type 13A4	NM_172613|Atp13a4|224079|ATPase type 13A4
mm9_v1_chr6_-_87622057_87622161	0.152983	FOXA2.p3	BC002179|Aplf|72103|aprataxin and PNKP like factor	AK078805|Aplf|72103|aprataxin and PNKP like factor	AK034191|Aplf|72103|aprataxin and PNKP like factor	AK008513|Aplf|72103|aprataxin and PNKP like factor	NM_001170489|Aplf|72103|aprataxin and PNKP like factor	NM_024251|Aplf|72103|aprataxin and PNKP like factor
mm9_v1_chr14_-_104213981_104213985	0.149714	FOXA2.p3	
mm9_v1_chr3_-_92556257_92556262	0.147991	FOXA2.p3	AK003795|Lce1g|66195|late cornified envelope 1G	AK004290|Lce1g|66195|late cornified envelope 1G	NM_025413|Lce1g|66195|late cornified envelope 1G
mm9_v1_chr3_-_145312928_145312948	0.147663	FOXA2.p3	BC066019|Cyr61|16007|cysteine rich protein 61	BC003205|Cyr61|16007|cysteine rich protein 61	AK156723|Cyr61|16007|cysteine rich protein 61	AK159452|Cyr61|16007|cysteine rich protein 61	M32490|Cyr61|16007|cysteine rich protein 61	NM_010516|Cyr61|16007|cysteine rich protein 61
mm9_v1_chr1_-_88008483_88008544	0.144073	FOXA2.p3	BC023690|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	AK033713|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	NM_008311|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B
mm9_v1_chr10_+_94038001_94038001	0.139952	FOXA2.p3	BC026867|Tmcc3|319880|transmembrane and coiled coil domains 3	NM_001168684|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr10_+_79217820_79217863	0.139215	FOXA2.p3	BC119135|Fgf22|67112|fibroblast growth factor 22	AK008922|Fgf22|67112|fibroblast growth factor 22	AK010054|Fgf22|67112|fibroblast growth factor 22	AB036765|Fgf22|67112|fibroblast growth factor 22	NM_023304|Fgf22|67112|fibroblast growth factor 22
mm9_v1_chr7_+_127986324_127986492	0.137064	FOXA2.p3	AK028524|Eef2k|13631|eukaryotic elongation factor-2 kinase	BC003433|Eef2k|13631|eukaryotic elongation factor-2 kinase	NM_007908|Eef2k|13631|eukaryotic elongation factor-2 kinase
mm9_v1_chr12_-_117190935_117191241	0.136079	FOXA2.p3	U38853|Igh-VJ558|16061|immunoglobulin heavy chain (J558 family)	AF296431|Igh-VJ558|16061|immunoglobulin heavy chain (J558 family)	AF045497|Ighm|16019|immunoglobulin heavy constant mu
mm9_v1_chr17_-_57333491_57333608	0.13463	FOXA2.p3	AF123385|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AF227533|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125477|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125479|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AB029155|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	NM_019418|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14
mm9_v1_chr4_+_44045506_44045645	0.131641	FOXA2.p3	
mm9_v1_chr4_+_57907032_57907040	0.129457	FOXA2.p3	AK086796|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr16_+_10412017_10412067	0.129377	FOXA2.p3	NM_011955|Nubp1|26425|nucleotide binding protein 1	AK157212|Nubp1|26425|nucleotide binding protein 1	BC031430|Nubp1|26425|nucleotide binding protein 1	BC055436|Nubp1|26425|nucleotide binding protein 1	AK020876|Nubp1|26425|nucleotide binding protein 1	BC047926|Nubp1|26425|nucleotide binding protein 1	AF114170|Nubp1|26425|nucleotide binding protein 1
mm9_v1_chr7_-_5757046_5757046	0.128838	FOXA2.p3	AF324866|Vmn1r63|81017|vomeronasal 1 receptor 63	NM_030742|Vmn1r63|81017|vomeronasal 1 receptor 63
mm9_v1_chr2_-_154394864_154394959	0.12729	FOXA2.p3	AK220226|E2f1|13555|E2F transcription factor 1
mm9_v1_chr13_-_61107271_61107285	0.126997	FOXA2.p3	AF136272|Ctsj|26898|cathepsin J	NM_012007|Ctsj|26898|cathepsin J	BC103769|Ctsj|26898|cathepsin J	AK005526|Ctsj|26898|cathepsin J	AK131661|Ctsj|26898|cathepsin J
mm9_v1_chr19_-_29409041_29409159	0.126151	FOXA2.p3	BC111817|Rln1|19773|relaxin 1	BC148202|Rln1|19773|relaxin 1	Z27088|Rln1|19773|relaxin 1	BC132654|Rln1|19773|relaxin 1	BC132656|Rln1|19773|relaxin 1	NM_011272|Rln1|19773|relaxin 1
mm9_v1_chrX_+_98644445_98644450	0.125468	FOXA2.p3	AK003906|Itgb1bp2|26549|integrin beta 1 binding protein 2	NM_013712|Itgb1bp2|26549|integrin beta 1 binding protein 2
mm9_v1_chr1_-_180259336_180259529	0.123867	FOXA2.p3	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr18_-_80397324_80397437	0.123545	FOXA2.p3	BC064066|Rbfa|68731|ribosome binding factor A	NM_199197|Rbfa|68731|ribosome binding factor A	AK004019|Rbfa|68731|ribosome binding factor A	AK145807|Rbfa|68731|ribosome binding factor A
mm9_v1_chr7_-_109248450_109248554	0.121368	FOXA2.p3	BC116823|Art5|11875|ADP-ribosyltransferase 5	BC116849|Art5|11875|ADP-ribosyltransferase 5	BC144825|Art5|11875|ADP-ribosyltransferase 5	BC144826|Art5|11875|ADP-ribosyltransferase 5	BC144827|Art5|11875|ADP-ribosyltransferase 5	BC144836|Art5|11875|ADP-ribosyltransferase 5
mm9_v1_chr4_+_122731563_122731731	0.121168	FOXA2.p3	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr9_-_110959315_110959476	0.119184	FOXA2.p3	AJ318863|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AF316576|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr8_+_74743673_74743687	0.119089	FOXA2.p3	BC006058|Fam32a|67922|family with sequence similarity 32, member A
mm9_v1_chr4_+_47220883_47221121	0.11857	FOXA2.p3	NM_009928|Col15a1|12819|collagen, type XV, alpha 1	BC052428|Col15a1|12819|collagen, type XV, alpha 1	AF011450|Col15a1|12819|collagen, type XV, alpha 1	AK134030|Col15a1|12819|collagen, type XV, alpha 1
mm9_v1_chr8_+_87189015_87189026	0.118383	FOXA2.p3	
mm9_v1_chr8_+_11448095_11448135	0.118209	FOXA2.p3	AK075619|Col4a2|12827|collagen, type IV, alpha 2
mm9_v1_chr11_+_46624300_46624301	0.116515	FOXA2.p3	AK080212|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	NM_178759|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK046560|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK079787|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK080042|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376716|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376717|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4
mm9_v1_chr9_+_121643763_121643808	0.115256	FOXA2.p3	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr1_+_158769044_158769153	0.115253	FOXA2.p3	AK142319|Angptl1|72713|angiopoietin-like 1	AK012888|Angptl1|72713|angiopoietin-like 1	BC082563|Angptl1|72713|angiopoietin-like 1	NM_028333|Angptl1|72713|angiopoietin-like 1
mm9_v1_chr1_+_180179405_180179521	0.113946	FOXA2.p3	AK213642|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr15_-_3929440_3929706	0.112645	FOXA2.p3	BC036385|Fbxo4|106052|F-box protein 4	BC040086|Fbxo4|106052|F-box protein 4	NM_134099|Fbxo4|106052|F-box protein 4	AK015995|Fbxo4|106052|F-box protein 4
mm9_v1_chr7_-_16870007_16870007	0.111728	FOXA2.p3	BC021915|Ccdc9|243846|coiled-coil domain containing 9	NM_172297|Ccdc9|243846|coiled-coil domain containing 9
mm9_v1_chr11_-_99489523_99489552	0.111178	FOXA2.p3	BC147087|Krtap4-1|665891|keratin associated protein 4-1	BC147088|Krtap4-1|665891|keratin associated protein 4-1	AK137752|Krtap4-1|665891|keratin associated protein 4-1	NM_001048196|Krtap4-1|665891|keratin associated protein 4-1
mm9_v1_chr12_-_86097674_86097704	0.110179	FOXA2.p3	AK212383|Npc2|67963|Niemann Pick type C2	AK216457|Npc2|67963|Niemann Pick type C2
mm9_v1_chr8_-_90886051_90886133	0.109431	FOXA2.p3	AF084259|Brd7|26992|bromodomain containing 7	AK142758|Brd7|26992|bromodomain containing 7	NM_012047|Brd7|26992|bromodomain containing 7	AK138934|Brd7|26992|bromodomain containing 7
mm9_v1_chr11_-_69616395_69616450	0.107881	FOXA2.p3	AK020106|6720407P12Rik|77890|RIKEN cDNA 6720407P12 gene
mm9_v1_chr4_+_88495990_88495990	0.106781	FOXA2.p3	NM_010502|Ifna1|15962|interferon alpha 1
mm9_v1_chr2_+_164773719_164773750	0.105289	FOXA2.p3	D12712|Mmp9|17395|matrix metallopeptidase 9	AK142787|Mmp9|17395|matrix metallopeptidase 9	AK159292|Mmp9|17395|matrix metallopeptidase 9	AK161176|Mmp9|17395|matrix metallopeptidase 9	Z27231|Mmp9|17395|matrix metallopeptidase 9	AK004651|Mmp9|17395|matrix metallopeptidase 9	BC046991|Mmp9|17395|matrix metallopeptidase 9	NM_013599|Mmp9|17395|matrix metallopeptidase 9
mm9_v1_chr18_+_12327237_12327264	0.102342	FOXA2.p3	AK144623|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	NM_029623|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	AK010309|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	AK154240|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	AK159691|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	BC021846|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene	BC012285|3110002H16Rik|76482|RIKEN cDNA 3110002H16 gene
mm9_v1_chr7_+_120909625_120909653	0.102207	FOXA2.p3	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr6_+_129528268_129528303	0.101731	FOXA2.p3	BC145177|Klre1|243655|killer cell lectin-like receptor family E member 1	AF306663|Klre1|243655|killer cell lectin-like receptor family E member 1	NM_153590|Klre1|243655|killer cell lectin-like receptor family E member 1
mm9_v1_chr9_-_109098475_109098488	0.101023	FOXA2.p3	BC119542|Fbxw13|211305|F-box and WD-40 domain protein 13	BC127237|Fbxw13|211305|F-box and WD-40 domain protein 13	AK054339|Fbxw13|211305|F-box and WD-40 domain protein 13	NM_177598|Fbxw13|211305|F-box and WD-40 domain protein 13
mm9_v1_chr2_+_109739389_109739489	0.0983849	FOXA2.p3	AK078903|Lin7c|22343|lin-7 homolog C (C. elegans)	AK049807|Lin7c|22343|lin-7 homolog C (C. elegans)
mm9_v1_chr10_+_52111413_52111541	0.0941072	FOXA2.p3	AK017780|Nepn|66650|nephrocan	AY938536|Nepn|66650|nephrocan	NM_025684|Nepn|66650|nephrocan	AK017656|Nepn|66650|nephrocan	BC132046|Nepn|66650|nephrocan	BC132048|Nepn|66650|nephrocan	AK017842|Nepn|66650|nephrocan
mm9_v1_chr9_-_61918412_61918412	0.0927073	FOXA2.p3	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr17_-_36809141_36809141	0.0913719	FOXA2.p3	AF539594|H2-M1|224756|histocompatibility 2, M region locus 1	NM_177636|H2-M1|224756|histocompatibility 2, M region locus 1
mm9_v1_chr2_+_13504271_13504305	0.090923	FOXA2.p3	
mm9_v1_chr10_+_42941291_42941329	0.0894296	FOXA2.p3	AK165732|Pdss2|71365|prenyl (solanesyl) diphosphate synthase, subunit 2	NM_001168289|Pdss2|71365|prenyl (solanesyl) diphosphate synthase, subunit 2	NM_027772|Pdss2|71365|prenyl (solanesyl) diphosphate synthase, subunit 2	AK017329|Pdss2|71365|prenyl (solanesyl) diphosphate synthase, subunit 2
mm9_v1_chr18_+_35989376_35989483	0.0874464	FOXA2.p3	AK005364|Cxxc5|67393|CXXC finger 5	BC089314|Cxxc5|67393|CXXC finger 5	NM_133687|Cxxc5|67393|CXXC finger 5
mm9_v1_chr13_+_95793012_95793015	0.0865987	FOXA2.p3	
mm9_v1_chr15_-_97661807_97661936	0.0860173	FOXA2.p3	AF207749|Hdac7|56233|histone deacetylase 7	AK040406|Hdac7|56233|histone deacetylase 7	AK150041|Hdac7|56233|histone deacetylase 7	AK036586|Hdac7|56233|histone deacetylase 7	AK044287|Hdac7|56233|histone deacetylase 7
mm9_v1_chr6_-_66509701_66509701	0.0857474	FOXA2.p3	AK029205|Vmn1r32|171188|vomeronasal 1 receptor 32	NM_134170|Vmn1r32|171188|vomeronasal 1 receptor 32
mm9_v1_chr2_-_113688771_113688881	0.0823825	FOXA2.p3	BC050875|Arhgap11a|228482|Rho GTPase activating protein 11A	AK129034|Arhgap11a|228482|Rho GTPase activating protein 11A	BC058105|Arhgap11a|228482|Rho GTPase activating protein 11A	NM_181416|Arhgap11a|228482|Rho GTPase activating protein 11A	AK162074|Arhgap11a|228482|Rho GTPase activating protein 11A
mm9_v1_chr9_+_105303117_105303117	0.0798519	FOXA2.p3	AK006153|Aste1|66595|asteroid homolog 1 (Drosophila)	NM_001164828|Aste1|66595|asteroid homolog 1 (Drosophila)
mm9_v1_chr15_-_84686558_84686558	0.0791532	FOXA2.p3	AK046530|Phf21b|271305|PHD finger protein 21B	NM_001081166|Phf21b|271305|PHD finger protein 21B
mm9_v1_chr11_-_101026888_101026952	0.0789283	FOXA2.p3	BC024538|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr9_-_119932620_119932715	0.0775341	FOXA2.p3	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr18_+_68497163_68497259	0.0774337	FOXA2.p3	NM_013596|Mc5r|17203|melanocortin 5 receptor	U08354|Mc5r|17203|melanocortin 5 receptor	BC100720|Mc5r|17203|melanocortin 5 receptor	BC100721|Mc5r|17203|melanocortin 5 receptor	BC100722|Mc5r|17203|melanocortin 5 receptor	BC100723|Mc5r|17203|melanocortin 5 receptor
mm9_v1_chr7_+_53039273_53039322	0.0767237	FOXA2.p3	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr11_-_102546084_102546176	0.074495	FOXA2.p3	
mm9_v1_chr8_+_74120004_74120094	0.0742141	FOXA2.p3	
mm9_v1_chrX_+_34805369_34805468	0.0739691	FOXA2.p3	AJ972665|Rhox4a|664609|reproductive homeobox 4A	NM_001039688|Rhox4a|664609|reproductive homeobox 4A	DQ058641|Rhox4a|664609|reproductive homeobox 4A	BC116370|Rhox4a|664609|reproductive homeobox 4A	BC116371|Rhox4a|664609|reproductive homeobox 4A	AK017380|Rhox4a|664609|reproductive homeobox 4A	BC057925|Rhox4a|664609|reproductive homeobox 4A	BC145382|Rhox4a|664609|reproductive homeobox 4A	BC171959|Rhox4a|664609|reproductive homeobox 4A
mm9_v1_chr1_+_175350728_175350734	0.0726065	FOXA2.p3	BC033443|Aim2|383619|absent in melanoma 2	AK050724|Aim2|383619|absent in melanoma 2	NM_001013779|Aim2|383619|absent in melanoma 2
mm9_v1_chr9_-_53344748_53344787	0.071043	FOXA2.p3	AK031702|Atm|11920|ataxia telangiectasia mutated homolog (human)	NM_007499|Atm|11920|ataxia telangiectasia mutated homolog (human)	AK139863|Atm|11920|ataxia telangiectasia mutated homolog (human)
mm9_v1_chr3_+_108374611_108374644	0.0705044	FOXA2.p3	AK007227|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK007339|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_025444|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK076595|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK160171|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC021447|Taf13|99730|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr5_-_135095885_135095904	0.06925	FOXA2.p3	
mm9_v1_chr18_-_3281709_3281744	0.0679044	FOXA2.p3	AJ292222|Crem|12916|cAMP responsive element modulator	AJ311667|Crem|12916|cAMP responsive element modulator	S67786|Crem|12916|cAMP responsive element modulator	NM_001110854|Crem|12916|cAMP responsive element modulator	NM_001110855|Crem|12916|cAMP responsive element modulator
mm9_v1_chr7_-_19751441_19751475	0.0656728	FOXA2.p3	AK050472|Gipr|381853|gastric inhibitory polypeptide receptor	AK146552|Gipr|381853|gastric inhibitory polypeptide receptor	NM_001080815|Gipr|381853|gastric inhibitory polypeptide receptor
mm9_v1_chr5_-_38215607_38215829	0.0641129	FOXA2.p3	AF308572|Msx1|17701|homeobox, msh-like 1	X14759|Msx1|17701|homeobox, msh-like 1	X59251|Msx1|17701|homeobox, msh-like 1	BC016426|Msx1|17701|homeobox, msh-like 1	AK077524|Msx1|17701|homeobox, msh-like 1	AK145726|Msx1|17701|homeobox, msh-like 1	AK078600|Msx1|17701|homeobox, msh-like 1	NM_010835|Msx1|17701|homeobox, msh-like 1
mm9_v1_chr15_+_102289600_102289666	0.0608383	FOXA2.p3	NM_001170911|Prr13|66151|proline rich 13	NM_025385|Prr13|66151|proline rich 13	AK003850|Prr13|66151|proline rich 13	AK002430|Prr13|66151|proline rich 13	AK008894|Prr13|66151|proline rich 13	AK154583|Prr13|66151|proline rich 13	BC016234|Prr13|66151|proline rich 13	AK181585|Prr13|66151|proline rich 13
mm9_v1_chr3_-_63733305_63733317	0.0602085	FOXA2.p3	AK087526|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	NM_177856|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chr10_-_80630456_80630508	0.0594502	FOXA2.p3	AK131903|Pias4|59004|protein inhibitor of activated STAT 4	AK076943|Pias4|59004|protein inhibitor of activated STAT 4	BC025159|Pias4|59004|protein inhibitor of activated STAT 4	NM_021501|Pias4|59004|protein inhibitor of activated STAT 4	AK131822|Pias4|59004|protein inhibitor of activated STAT 4	AK148066|Pias4|59004|protein inhibitor of activated STAT 4	AK147813|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr17_+_74888823_74888973	0.0583293	FOXA2.p3	AK166347|Yipf4|67864|Yip1 domain family, member 4	AK009618|Yipf4|67864|Yip1 domain family, member 4	AK083301|Yipf4|67864|Yip1 domain family, member 4	NM_026417|Yipf4|67864|Yip1 domain family, member 4	AK017721|Yipf4|67864|Yip1 domain family, member 4	AK017722|Yipf4|67864|Yip1 domain family, member 4	AK159227|Yipf4|67864|Yip1 domain family, member 4	BC003936|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr3_-_63733328_63733393	0.0582779	FOXA2.p3	BC125500|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	BC132160|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chr7_-_110920107_110920107	0.0582181	FOXA2.p3	NM_013621|Olfr69|18370|olfactory receptor 69
mm9_v1_chr10_-_90612412_90612509	0.05719	FOXA2.p3	AK208952|Tmpo|21917|thymopoietin
mm9_v1_chr2_+_30271579_30271778	0.0564747	FOXA2.p3	AK049184|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC006626|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC052852|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK160980|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AY035997|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK046288|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr15_-_102552527_102552608	0.0542773	FOXA2.p3	AK087513|Calcoco1|67488|calcium binding and coiled coil domain 1	NM_026192|Calcoco1|67488|calcium binding and coiled coil domain 1
mm9_v1_chr2_+_27020999_27021026	0.0542571	FOXA2.p3	BC141022|Dbh|13166|dopamine beta hydroxylase	BC171949|Dbh|13166|dopamine beta hydroxylase	AK132245|Dbh|13166|dopamine beta hydroxylase	NM_138942|Dbh|13166|dopamine beta hydroxylase
mm9_v1_chr7_+_24919177_24919260	0.0516581	FOXA2.p3	NM_019941|Zfp235|56525|zinc finger protein 235	AK045726|Zfp235|56525|zinc finger protein 235	AK002713|Zfp235|56525|zinc finger protein 235	AK147833|Zfp235|56525|zinc finger protein 235	AF167321|Zfp235|56525|zinc finger protein 235	AK139127|Zfp235|56525|zinc finger protein 235	BC099965|Zfp235|56525|zinc finger protein 235
mm9_v1_chr7_-_121398132_121398234	0.0515694	FOXA2.p3	AF231925|Copb1|70349|coatomer protein complex, subunit beta 1	AK172214|Copb1|70349|coatomer protein complex, subunit beta 1	BC030837|Copb1|70349|coatomer protein complex, subunit beta 1	NM_033370|Copb1|70349|coatomer protein complex, subunit beta 1	AK082977|Copb1|70349|coatomer protein complex, subunit beta 1	AK149828|Copb1|70349|coatomer protein complex, subunit beta 1	AK011453|Copb1|70349|coatomer protein complex, subunit beta 1	AK152222|Copb1|70349|coatomer protein complex, subunit beta 1	AK161544|Copb1|70349|coatomer protein complex, subunit beta 1	AK135168|Copb1|70349|coatomer protein complex, subunit beta 1
mm9_v1_chr8_+_89175467_89175467	0.0498646	FOXA2.p3	AK075719|Lonp2|66887|lon peptidase 2, peroxisomal	NM_001168591|Lonp2|66887|lon peptidase 2, peroxisomal
mm9_v1_chr2_-_17918493_17918584	0.049805	FOXA2.p3	AK018883|H2afb1|68231|H2A histone family, member B1	EU079024|H2afb1|68231|H2A histone family, member B1	BC048736|H2afb1|68231|H2A histone family, member B1	AK006586|H2afb1|68231|H2A histone family, member B1	AK018922|H2afb1|68231|H2A histone family, member B1	AK018951|H2afb1|68231|H2A histone family, member B1	AK018962|H2afb1|68231|H2A histone family, member B1	AK160415|H2afb1|68231|H2A histone family, member B1	AK015538|H2afb1|68231|H2A histone family, member B1	AK018839|H2afb1|68231|H2A histone family, member B1	NM_026627|H2afb1|68231|H2A histone family, member B1	BC061062|H2afb1|68231|H2A histone family, member B1
mm9_v1_chrY_+_1855008_1855008	0.048483	FOXA2.p3	EU315689|Gm6026|547210|predicted gene 6026	NM_001113395|Gm16501|100042840|predicted gene 16501	NM_001177569|Gm6026|547210|predicted gene 6026
mm9_v1_chr4_+_102664399_102664426	0.0471651	FOXA2.p3	NM_001163768|Tctex1d1|67344|Tctex1 domain containing 1	AK040270|Tctex1d1|67344|Tctex1 domain containing 1
mm9_v1_chr7_-_5364746_5364746	0.0469256	FOXA2.p3	AF324869|Vmn1r58|81014|vomeronasal 1 receptor 58	NM_030739|Vmn1r58|81014|vomeronasal 1 receptor 58
mm9_v1_chr4_+_154230308_154230456	0.0460249	FOXA2.p3	NM_172878|Ttc34|242800|tetratricopeptide repeat domain 34	AK030055|Ttc34|242800|tetratricopeptide repeat domain 34	BC068299|Ttc34|242800|tetratricopeptide repeat domain 34
mm9_v1_chr6_+_57159851_57159851	0.0441924	FOXA2.p3	NM_053235|Vmn1r13|113862|vomeronasal 1 receptor 13
mm9_v1_chr4_-_108311676_108311740	0.0439675	FOXA2.p3	
mm9_v1_chr11_-_70223517_70223527	0.0406596	FOXA2.p3	BC090620|Pelp1|75273|proline, glutamic acid and leucine rich protein 1
mm9_v1_chr8_+_46035561_46035561	0.0403929	FOXA2.p3	AJ250768|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)	NM_001081286|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)
mm9_v1_chr1_+_99666744_99666792	0.0380519	FOXA2.p3	AK014287|Gin1|252876|gypsy retrotransposon integrase 1	AK018404|Gin1|252876|gypsy retrotransposon integrase 1	NM_026250|Gin1|252876|gypsy retrotransposon integrase 1	AK090002|Gin1|252876|gypsy retrotransposon integrase 1	AK015243|Gin1|252876|gypsy retrotransposon integrase 1	AK169361|Gin1|252876|gypsy retrotransposon integrase 1
mm9_v1_chr14_-_52780511_52780625	0.0357797	FOXA2.p3	AK082901|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)
mm9_v1_chr11_-_99891181_99891181	0.0344236	FOXA2.p3	NM_013570|Krt33b|16671|keratin 33B
mm9_v1_chr1_-_168058009_168058054	0.0334594	FOXA2.p3	BC117936|Dusp27|240892|dual specificity phosphatase 27 (putative)	AK142263|Dusp27|240892|dual specificity phosphatase 27 (putative)	NM_001033344|Dusp27|240892|dual specificity phosphatase 27 (putative)	NM_001160049|Dusp27|240892|dual specificity phosphatase 27 (putative)	AK048603|Dusp27|240892|dual specificity phosphatase 27 (putative)
mm9_v1_chr11_-_97490978_97491083	0.0325662	FOXA2.p3	AK087411|E130012A19Rik|103551|RIKEN cDNA E130012A19 gene	BC055770|E130012A19Rik|103551|RIKEN cDNA E130012A19 gene	NM_175332|E130012A19Rik|103551|RIKEN cDNA E130012A19 gene
mm9_v1_chr18_-_62915799_62916000	0.0323588	FOXA2.p3	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr11_-_70223528_70223535	0.0319084	FOXA2.p3	AK005027|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	AK016197|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	AK128966|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	NM_029231|Pelp1|75273|proline, glutamic acid and leucine rich protein 1
mm9_v1_chr1_-_132611151_132611152	0.0258265	FOXA2.p3	EU334169|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616666|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616667|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616668|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616669|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616670|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_001162416|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr14_-_100548982_100549014	0.0257935	FOXA2.p3	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chr15_-_97835044_97835154	0.0249633	FOXA2.p3	BC052326|Col2a1|12824|collagen, type II, alpha 1	BC051383|Col2a1|12824|collagen, type II, alpha 1	AK132311|Col2a1|12824|collagen, type II, alpha 1	BC082331|Col2a1|12824|collagen, type II, alpha 1	AK053784|Col2a1|12824|collagen, type II, alpha 1	NM_001113515|Col2a1|12824|collagen, type II, alpha 1	NM_031163|Col2a1|12824|collagen, type II, alpha 1
mm9_v1_chr7_+_132695758_132695826	0.0227779	FOXA2.p3	AK088086|Il4ra|16190|interleukin 4 receptor, alpha	AK137827|Il4ra|16190|interleukin 4 receptor, alpha	AK149603|Il4ra|16190|interleukin 4 receptor, alpha	AK149717|Il4ra|16190|interleukin 4 receptor, alpha	AK150584|Il4ra|16190|interleukin 4 receptor, alpha	AK151998|Il4ra|16190|interleukin 4 receptor, alpha	AK159375|Il4ra|16190|interleukin 4 receptor, alpha	AK153186|Il4ra|16190|interleukin 4 receptor, alpha	AK160016|Il4ra|16190|interleukin 4 receptor, alpha	BC112911|Il4ra|16190|interleukin 4 receptor, alpha	NM_001008700|Il4ra|16190|interleukin 4 receptor, alpha	AK042342|Il4ra|16190|interleukin 4 receptor, alpha	M27959|Il4ra|16190|interleukin 4 receptor, alpha	M27960|Il4ra|16190|interleukin 4 receptor, alpha	M29854|Il4ra|16190|interleukin 4 receptor, alpha
mm9_v1_chr3_-_92392895_92392945	0.0217741	FOXA2.p3	BC061167|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	AK077172|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	BC055104|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	S49659|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	M29603|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	NM_008574|Smcp|17235|sperm mitochondria-associated cysteine-rich protein
mm9_v1_chr15_+_81900546_81900546	0.0214551	FOXA2.p3	NM_028897|Mei1|74369|meiosis defective 1
mm9_v1_chr18_+_56559977_56560028	0.0210846	FOXA2.p3	AK018551|Gramd3|107022|GRAM domain containing 3	BC057978|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr12_-_36979984_36979984	0.0206285	FOXA2.p3	AK016859|1700108M19Rik|71156|RIKEN cDNA 1700108M19 gene	NM_001177877|1700108M19Rik|71156|RIKEN cDNA 1700108M19 gene
mm9_v1_chr16_+_15637951_15637990	0.0157721	FOXA2.p3	AK084827|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	NM_011159|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	AB011543|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	AB007544|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide	D87521|Prkdc|19090|protein kinase, DNA activated, catalytic polypeptide
mm9_v1_chr13_+_27404495_27404496	0.0151446	FOXA2.p3	AF015563|Prl6a1|19111|prolactin family 6, subfamily a, member 1	NM_011166|Prl6a1|19111|prolactin family 6, subfamily a, member 1	AF011384|Prl6a1|19111|prolactin family 6, subfamily a, member 1
mm9_v1_chr19_+_23215704_23215723	0.0141892	FOXA2.p3	AK028544|Klf9|16601|Kruppel-like factor 9	NM_010638|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr15_-_54109855_54110038	0.0103933	FOXA2.p3	BC049782|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK140244|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	U94331|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK146105|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AB013898|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	NM_008764|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm9_v1_chr4_-_128483355_128483429	0.0100784	FOXA2.p3	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr14_+_54980488_54980535	0.00785417	FOXA2.p3	AK139484|Oxa1l|69089|oxidase assembly 1-like	AK154304|Oxa1l|69089|oxidase assembly 1-like	AK007567|Oxa1l|69089|oxidase assembly 1-like	AK087756|Oxa1l|69089|oxidase assembly 1-like	AK028379|Oxa1l|69089|oxidase assembly 1-like	AK052432|Oxa1l|69089|oxidase assembly 1-like	AK077624|Oxa1l|69089|oxidase assembly 1-like	AK154532|Oxa1l|69089|oxidase assembly 1-like	AK163101|Oxa1l|69089|oxidase assembly 1-like	AK170898|Oxa1l|69089|oxidase assembly 1-like	NM_026936|Oxa1l|69089|oxidase assembly 1-like	AK044817|Oxa1l|69089|oxidase assembly 1-like	BC027191|Oxa1l|69089|oxidase assembly 1-like
mm9_v1_chr8_-_25836259_25836296	0.00748374	FOXA2.p3	BC049609|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	BC060975|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	BC129920|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	NM_009619|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	X64227|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)
mm9_v1_chr16_-_91044623_91044646	0.00274742	FOXA2.p3	NM_026110|Gcfc1|67367|GC-rich sequence DNA-binding factor 1
mm9_v1_chr10_-_66747843_66748097	0.00138846	FOXA2.p3	AK181810|Nrbf2|641340|nuclear receptor binding factor 2	AK189272|Nrbf2|641340|nuclear receptor binding factor 2	AK205591|Nrbf2|641340|nuclear receptor binding factor 2	AK004200|Nrbf2|641340|nuclear receptor binding factor 2	BC019448|Nrbf2|641340|nuclear receptor binding factor 2	NM_001036293|Nrbf2|641340|nuclear receptor binding factor 2	AK002810|Nrbf2|641340|nuclear receptor binding factor 2
mm9_v1_chr11_-_33047217_33047399	0.00128401	FOXA2.p3	AK078245|Fgf18|14172|fibroblast growth factor 18	AB004639|Fgf18|14172|fibroblast growth factor 18	AF211187|Fgf18|14172|fibroblast growth factor 18	AF075291|Fgf18|14172|fibroblast growth factor 18	NM_008005|Fgf18|14172|fibroblast growth factor 18
