mm9_v1_chr12_+_110783593_110783620	113.367	FOXD3.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chr5_-_104543106_104543114	73.2662	FOXD3.p2	NM_010097|Sparcl1|13602|SPARC-like 1
mm9_v1_chr12_+_110783786_110783839	70.6512	FOXD3.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr6_-_60779848_60779848	67.8029	FOXD3.p2	AF179273|Snca|20617|synuclein, alpha	NM_009221|Snca|20617|synuclein, alpha
mm9_v1_chr3_-_57105840_57105943	64.1394	FOXD3.p2	BC083073|Tm4sf1|17112|transmembrane 4 superfamily member 1	NM_008536|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK134603|Tm4sf1|17112|transmembrane 4 superfamily member 1
mm9_v1_chr9_-_14185950_14185986	60.0427	FOXD3.p2	AK142446|Endod1|71946|endonuclease domain containing 1
mm9_v1_chr4_-_117881591_117881662	53.9198	FOXD3.p2	AK135889|Ptprf|19268|protein tyrosine phosphatase, receptor type, F
mm9_v1_chr14_-_71029960_71029960	48.4134	FOXD3.p2	BC016897|Epb4.9|13829|erythrocyte protein band 4.9	NM_013514|Epb4.9|13829|erythrocyte protein band 4.9
mm9_v1_chr9_-_49311823_49311910	46.8483	FOXD3.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr8_-_74150754_74150876	46.2072	FOXD3.p2	AK141620|Unc13a|382018|unc-13 homolog A (C. elegans)	AK048697|Unc13a|382018|unc-13 homolog A (C. elegans)	AK039579|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr19_-_4906607_4906628	45.3842	FOXD3.p2	AK037753|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	BC076577|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK161343|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK045850|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	AK168901|Bbs1|52028|Bardet-Biedl syndrome 1 (human)	NM_001033128|Bbs1|52028|Bardet-Biedl syndrome 1 (human)
mm9_v1_chr10_+_79167102_79167137	44.3183	FOXD3.p2	NM_001077184|Bsg|12215|basigin	NM_009768|Bsg|12215|basigin
mm9_v1_chr9_+_78039786_78039851	43.8412	FOXD3.p2	AK008400|Gsta4|14860|glutathione S-transferase, alpha 4	AK008189|Gsta4|14860|glutathione S-transferase, alpha 4	AK011841|Gsta4|14860|glutathione S-transferase, alpha 4	AK019271|Gsta4|14860|glutathione S-transferase, alpha 4	AK009668|Gsta4|14860|glutathione S-transferase, alpha 4	AK010098|Gsta4|14860|glutathione S-transferase, alpha 4	AK008193|Gsta4|14860|glutathione S-transferase, alpha 4	AK008490|Gsta4|14860|glutathione S-transferase, alpha 4	AK011177|Gsta4|14860|glutathione S-transferase, alpha 4	BC012639|Gsta4|14860|glutathione S-transferase, alpha 4	L06047|Gsta4|14860|glutathione S-transferase, alpha 4
mm9_v1_chr9_+_45646611_45646685	43.4339	FOXD3.p2	NM_001145947|Bace1|23821|beta-site APP cleaving enzyme 1	NM_011792|Bace1|23821|beta-site APP cleaving enzyme 1	AK033112|Bace1|23821|beta-site APP cleaving enzyme 1	AK041285|Bace1|23821|beta-site APP cleaving enzyme 1	AK080498|Bace1|23821|beta-site APP cleaving enzyme 1	AK082317|Bace1|23821|beta-site APP cleaving enzyme 1	AK163583|Bace1|23821|beta-site APP cleaving enzyme 1	AK046175|Bace1|23821|beta-site APP cleaving enzyme 1	AK082230|Bace1|23821|beta-site APP cleaving enzyme 1	AK049626|Bace1|23821|beta-site APP cleaving enzyme 1	AF190726|Bace1|23821|beta-site APP cleaving enzyme 1	AK014464|Bace1|23821|beta-site APP cleaving enzyme 1	BC048189|Bace1|23821|beta-site APP cleaving enzyme 1
mm9_v1_chr19_+_53403902_53404133	42.0763	FOXD3.p2	NM_010847|Mxi1|17859|Max interacting protein 1	AK144219|Mxi1|17859|Max interacting protein 1	AK017637|Mxi1|17859|Max interacting protein 1	AK140465|Mxi1|17859|Max interacting protein 1	L38822|Mxi1|17859|Max interacting protein 1	U24674|Mxi1|17859|Max interacting protein 1
mm9_v1_chr4_+_146124224_146124224	40.4606	FOXD3.p2	NM_001177546|Zfp600|667666|zinc finger protein 600
mm9_v1_chr4_+_104829963_104829965	38.8828	FOXD3.p2	BC005558|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr1_-_72905107_72905143	38.8738	FOXD3.p2	AK011683|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr16_+_7409879_7410026	38.7539	FOXD3.p2	AK034297|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr18_-_25637339_25637341	38.014	FOXD3.p2	AK038871|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr1_+_45390415_45390462	36.9415	FOXD3.p2	BC039923|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr10_+_68996455_68996596	36.0578	FOXD3.p2	NM_146005|Ank3|11735|ankyrin 3, epithelial	NM_170688|Ank3|11735|ankyrin 3, epithelial	NM_170689|Ank3|11735|ankyrin 3, epithelial	NM_170690|Ank3|11735|ankyrin 3, epithelial	NM_170728|Ank3|11735|ankyrin 3, epithelial	NM_170729|Ank3|11735|ankyrin 3, epithelial	NM_170730|Ank3|11735|ankyrin 3, epithelial	AK162547|Ank3|11735|ankyrin 3, epithelial	AK042330|Ank3|11735|ankyrin 3, epithelial	BC021657|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr17_+_36131397_36131470	35.1552	FOXD3.p2	AK078380|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK020860|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK142942|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	BC055918|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene
mm9_v1_chr4_+_104829867_104829919	32.215	FOXD3.p2	AK159136|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr2_+_103909961_103910022	31.8498	FOXD3.p2	BC038128|Cd59b|333883|CD59b antigen	BC059731|Cd59b|333883|CD59b antigen
mm9_v1_chr6_+_4490515_4490528	31.7668	FOXD3.p2	AK003150|Col1a2|12843|collagen, type I, alpha 2	BC023203|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr18_-_36926866_36926900	31.3693	FOXD3.p2	
mm9_v1_chr4_+_104830022_104830255	31.2751	FOXD3.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr2_+_145068346_145068346	30.8113	FOXD3.p2	BC017615|Slc24a3|94249|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	NM_053195|Slc24a3|94249|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
mm9_v1_chr19_+_30020236_30020283	30.5682	FOXD3.p2	AK075849|Il33|77125|interleukin 33	NM_001164724|Il33|77125|interleukin 33
mm9_v1_chr15_+_101858606_101858684	29.5375	FOXD3.p2	NM_010664|Krt18|16668|keratin 18	M11686|Krt18|16668|keratin 18	AK167469|Krt18|16668|keratin 18	AK145413|Krt18|16668|keratin 18	AK167072|Krt18|16668|keratin 18	AK167676|Krt18|16668|keratin 18	AK167432|Krt18|16668|keratin 18	AK167265|Krt18|16668|keratin 18	M36376|Krt18|16668|keratin 18	BC020474|Krt18|16668|keratin 18	BC089022|Krt18|16668|keratin 18
mm9_v1_chr13_+_97837240_97837241	28.7667	FOXD3.p2	BC084589|Fam169a|320557|family with sequence similarity 169, member A	NM_001146045|Fam169a|320557|family with sequence similarity 169, member A
mm9_v1_chr10_+_24315247_24315401	28.7468	FOXD3.p2	NM_010217|Ctgf|14219|connective tissue growth factor	BC006783|Ctgf|14219|connective tissue growth factor	M80263|Ctgf|14219|connective tissue growth factor	M70642|Ctgf|14219|connective tissue growth factor
mm9_v1_chr9_+_92502076_92502169	28.5209	FOXD3.p2	
mm9_v1_chr18_-_25637786_25637794	27.5762	FOXD3.p2	AK078071|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr13_+_59234737_59234835	26.7967	FOXD3.p2	AK021108|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr9_+_109905895_109906037	26.5605	FOXD3.p2	
mm9_v1_chr4_+_104829951_104829954	25.5923	FOXD3.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr11_-_102666332_102666332	25.5044	FOXD3.p2	AK085224|Gjc1|14615|gap junction protein, gamma 1	AK085236|Gjc1|14615|gap junction protein, gamma 1	NM_008122|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr1_-_170085342_170085390	25.1715	FOXD3.p2	AK083616|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr2_+_70400179_70400352	25.0067	FOXD3.p2	AK054554|Gad1|14415|glutamic acid decarboxylase 1	NM_008077|Gad1|14415|glutamic acid decarboxylase 1	AK148497|Gad1|14415|glutamic acid decarboxylase 1	AK160868|Gad1|14415|glutamic acid decarboxylase 1	AK136801|Gad1|14415|glutamic acid decarboxylase 1	BC027059|Gad1|14415|glutamic acid decarboxylase 1	AF326547|Gad1|14415|glutamic acid decarboxylase 1	AF326548|Gad1|14415|glutamic acid decarboxylase 1	Z49976|Gad1|14415|glutamic acid decarboxylase 1
mm9_v1_chr3_-_152003317_152003373	24.5622	FOXD3.p2	BC138328|Fam73a|215708|family with sequence similarity 73, member A	BC138329|Fam73a|215708|family with sequence similarity 73, member A	AK166051|Fam73a|215708|family with sequence similarity 73, member A	BC059928|Fam73a|215708|family with sequence similarity 73, member A	AK044739|Fam73a|215708|family with sequence similarity 73, member A	BC098205|Fam73a|215708|family with sequence similarity 73, member A	AK045347|Fam73a|215708|family with sequence similarity 73, member A	AK143366|Fam73a|215708|family with sequence similarity 73, member A	AK085017|Fam73a|215708|family with sequence similarity 73, member A	NM_001162375|Fam73a|215708|family with sequence similarity 73, member A	NM_174868|Fam73a|215708|family with sequence similarity 73, member A
mm9_v1_chr11_-_53083217_53083336	24.2816	FOXD3.p2	AK180907|Hspa4|15525|heat shock protein 4	AK148883|Hspa4|15525|heat shock protein 4
mm9_v1_chr11_-_86517662_86517713	23.5678	FOXD3.p2	AK167527|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr9_-_14185399_14185474	23.534	FOXD3.p2	BC096490|Endod1|71946|endonuclease domain containing 1	AK079741|Endod1|71946|endonuclease domain containing 1	AK078056|Endod1|71946|endonuclease domain containing 1	BC019813|Endod1|71946|endonuclease domain containing 1	AK086102|Endod1|71946|endonuclease domain containing 1
mm9_v1_chr5_+_137994744_137994862	23.2016	FOXD3.p2	BC049539|Actl6b|83766|actin-like 6B	NM_031404|Actl6b|83766|actin-like 6B	AB075226|Actl6b|83766|actin-like 6B
mm9_v1_chr14_-_26722378_26722430	23.054	FOXD3.p2	BC032982|Plac9|211623|placenta specific 9	NM_207229|Plac9|211623|placenta specific 9	AK131607|Plac9|211623|placenta specific 9	AK131901|Plac9|211623|placenta specific 9	AK028003|Plac9|211623|placenta specific 9	AK047878|Plac9|211623|placenta specific 9	AK160781|Plac9|211623|placenta specific 9	AK131614|Plac9|211623|placenta specific 9	AK133546|Plac9|211623|placenta specific 9
mm9_v1_chr14_-_27001758_27001810	22.9604	FOXD3.p2	BC032982|Plac9|211623|placenta specific 9	NM_207229|Plac9|211623|placenta specific 9	AK131607|Plac9|211623|placenta specific 9	AK131901|Plac9|211623|placenta specific 9	AK028003|Plac9|211623|placenta specific 9	AK047878|Plac9|211623|placenta specific 9	AK160781|Plac9|211623|placenta specific 9	AK131614|Plac9|211623|placenta specific 9	AK133546|Plac9|211623|placenta specific 9
mm9_v1_chr1_+_168184269_168184413	22.3148	FOXD3.p2	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr7_-_31411149_31411184	22.1858	FOXD3.p2	AK007996|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	NM_025628|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1
mm9_v1_chr7_-_147268395_147268472	22.1373	FOXD3.p2	AK002979|Caly|68566|calcyon neuron-specific vesicular protein	AK163466|Caly|68566|calcyon neuron-specific vesicular protein	AK003400|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190385|Caly|68566|calcyon neuron-specific vesicular protein	NM_026769|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr16_-_28929698_28929810	22.114	FOXD3.p2	BC085092|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	BC068245|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	NM_177718|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene
mm9_v1_chr9_-_14185685_14185685	21.9046	FOXD3.p2	AK173036|Endod1|71946|endonuclease domain containing 1	NM_028013|Endod1|71946|endonuclease domain containing 1
mm9_v1_chrX_+_162782484_162782852	21.8631	FOXD3.p2	NM_001177955|Gpm6b|14758|glycoprotein m6b	NM_001177956|Gpm6b|14758|glycoprotein m6b	NM_001177957|Gpm6b|14758|glycoprotein m6b	NM_001177958|Gpm6b|14758|glycoprotein m6b	NM_001177959|Gpm6b|14758|glycoprotein m6b	NM_001177960|Gpm6b|14758|glycoprotein m6b	AF254869|Gpm6b|14758|glycoprotein m6b	AF254870|Gpm6b|14758|glycoprotein m6b	AF254872|Gpm6b|14758|glycoprotein m6b	AF254873|Gpm6b|14758|glycoprotein m6b	AF254874|Gpm6b|14758|glycoprotein m6b	AF254875|Gpm6b|14758|glycoprotein m6b	AF254878|Gpm6b|14758|glycoprotein m6b	AF254879|Gpm6b|14758|glycoprotein m6b	AK013660|Gpm6b|14758|glycoprotein m6b	AK140714|Gpm6b|14758|glycoprotein m6b	S65737|Gpm6b|14758|glycoprotein m6b
mm9_v1_chr7_-_151621960_151622035	21.2676	FOXD3.p2	AK195592|Cttn|13043|cortactin
mm9_v1_chr16_+_43619057_43619100	20.9445	FOXD3.p2	AK178854|Zbtb20|56490|zinc finger and BTB domain containing 20	AK013698|Zbtb20|56490|zinc finger and BTB domain containing 20	AK036125|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr4_+_94406190_94406316	20.8549	FOXD3.p2	X67553|Tek|21687|endothelial-specific receptor tyrosine kinase	X71426|Tek|21687|endothelial-specific receptor tyrosine kinase	S67051|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr1_+_45402907_45402949	20.8319	FOXD3.p2	AK029451|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr1_-_45460310_45460349	20.7882	FOXD3.p2	BC043696|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr13_+_42961598_42961632	20.6169	FOXD3.p2	AK139452|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr2_+_67955769_67955862	20.3898	FOXD3.p2	NM_020283|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC094660|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132246|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132528|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm9_v1_chr10_-_127935725_127935761	20.2349	FOXD3.p2	BC037527|Myl6b|216459|myosin, light polypeptide 6B	NM_172259|Myl6b|216459|myosin, light polypeptide 6B
mm9_v1_chr11_+_69435553_69435610	20.1017	FOXD3.p2	AK011406|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	AK161230|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	BC061227|Sat2|69215|spermidine/spermine N1-acetyl transferase 2	NM_026991|Sat2|69215|spermidine/spermine N1-acetyl transferase 2
mm9_v1_chr8_-_85982247_85982289	19.9512	FOXD3.p2	AK002521|Scoc|56367|short coiled-coil protein	BC147069|Scoc|56367|short coiled-coil protein	NM_001039137|Scoc|56367|short coiled-coil protein
mm9_v1_chr17_+_75784448_75784497	19.8294	FOXD3.p2	AK080024|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr15_+_4325490_4325644	19.7387	FOXD3.p2	AK038575|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_177355|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137637|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137639|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	AK044972|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm9_v1_chr4_-_15076940_15076952	19.6795	FOXD3.p2	AK050307|Necab1|69352|N-terminal EF-hand calcium binding protein 1
mm9_v1_chr5_-_143665305_143665346	19.5875	FOXD3.p2	AK151514|Actb|11461|actin, beta
mm9_v1_chr1_-_134638361_134638397	19.5803	FOXD3.p2	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr6_+_88775664_88775919	19.4642	FOXD3.p2	AK195256|Mgll|23945|monoglyceride lipase	AK199521|Mgll|23945|monoglyceride lipase	AK213425|Mgll|23945|monoglyceride lipase	AK185298|Mgll|23945|monoglyceride lipase	AK186020|Mgll|23945|monoglyceride lipase	AK190741|Mgll|23945|monoglyceride lipase	AK191234|Mgll|23945|monoglyceride lipase	AK191381|Mgll|23945|monoglyceride lipase	AK193146|Mgll|23945|monoglyceride lipase	AK194428|Mgll|23945|monoglyceride lipase	AK195163|Mgll|23945|monoglyceride lipase	AK195208|Mgll|23945|monoglyceride lipase	AK197913|Mgll|23945|monoglyceride lipase	AK198715|Mgll|23945|monoglyceride lipase	AK199057|Mgll|23945|monoglyceride lipase	AK200299|Mgll|23945|monoglyceride lipase	AK202265|Mgll|23945|monoglyceride lipase	AK202325|Mgll|23945|monoglyceride lipase	AK208993|Mgll|23945|monoglyceride lipase	AK214675|Mgll|23945|monoglyceride lipase	AK136867|Mgll|23945|monoglyceride lipase
mm9_v1_chr4_+_138012860_138012969	19.3914	FOXD3.p2	AK021100|Camk2n1|66259|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm9_v1_chr4_+_149022266_149022381	19.265	FOXD3.p2	
mm9_v1_chr16_+_48310386_48310386	19.1431	FOXD3.p2	AY561246|Dppa2|73703|developmental pluripotency associated 2	NM_028615|Dppa2|73703|developmental pluripotency associated 2
mm9_v1_chr2_+_97307652_97307938	18.9937	FOXD3.p2	AK032467|Lrrc4c|241568|leucine rich repeat containing 4C	AK032088|Lrrc4c|241568|leucine rich repeat containing 4C	NM_178725|Lrrc4c|241568|leucine rich repeat containing 4C	BC094588|Lrrc4c|241568|leucine rich repeat containing 4C
mm9_v1_chr18_-_16966954_16967033	18.9727	FOXD3.p2	AK087418|Cdh2|12558|cadherin 2	BC022107|Cdh2|12558|cadherin 2	AK032826|Cdh2|12558|cadherin 2
mm9_v1_chr5_-_139606339_139606437	18.7822	FOXD3.p2	AK158994|Prkar1b|19085|protein kinase, cAMP dependent regulatory, type I beta
mm9_v1_chr4_-_76240202_76240202	18.72	FOXD3.p2	BC086654|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_011211|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr13_-_36826104_36826206	18.4308	FOXD3.p2	AK003046|Nrn1|68404|neuritin 1
mm9_v1_chr11_-_41813792_41813857	18.3659	FOXD3.p2	AK047085|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK136889|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_177408|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233775|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233776|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233777|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233778|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233779|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233780|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233781|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233782|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233783|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233784|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233785|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233786|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233787|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233788|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233789|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233790|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233791|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233792|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233793|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233794|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233795|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233796|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233797|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233798|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233799|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233800|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233801|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233802|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK141129|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK049857|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr19_+_20676453_20676504	18.3017	FOXD3.p2	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr11_+_97702591_97702632	18.2809	FOXD3.p2	AK081899|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK140210|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK042827|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK031146|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK035650|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK018341|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK080808|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK082773|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene
mm9_v1_chr3_+_94926272_94926508	18.1084	FOXD3.p2	
mm9_v1_chr10_-_75931585_75931614	17.9368	FOXD3.p2	AK037727|Ybey|216119|ybeY metallopeptidase	AK051909|Ybey|216119|ybeY metallopeptidase	AK136543|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr14_-_26862144_26862196	17.8806	FOXD3.p2	BC032982|Plac9|211623|placenta specific 9	NM_207229|Plac9|211623|placenta specific 9	AK131607|Plac9|211623|placenta specific 9	AK131901|Plac9|211623|placenta specific 9	AK028003|Plac9|211623|placenta specific 9	AK047878|Plac9|211623|placenta specific 9	AK160781|Plac9|211623|placenta specific 9	AK131614|Plac9|211623|placenta specific 9	AK133546|Plac9|211623|placenta specific 9
mm9_v1_chr8_-_87297283_87297318	17.6735	FOXD3.p2	BC090626|Nfix|18032|nuclear factor I/X
mm9_v1_chr13_+_14705508_14705551	17.6717	FOXD3.p2	AK136115|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	NM_008944|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK151883|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK152862|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK167752|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012990|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK035578|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK154011|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012119|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	BC026768|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AF099733|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2
mm9_v1_chr16_-_44558929_44559002	17.5845	FOXD3.p2	BC078631|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	BC062892|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028889|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	NM_172506|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK043379|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028770|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm9_v1_chr1_-_42749940_42749978	17.4753	FOXD3.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr9_-_30957394_30957461	17.4158	FOXD3.p2	
mm9_v1_chr12_-_73509668_73509745	17.4104	FOXD3.p2	BC053926|Rtn1|104001|reticulon 1	BC058579|Rtn1|104001|reticulon 1
mm9_v1_chr6_-_92431385_92431385	17.1773	FOXD3.p2	AK020123|Prickle2|243548|prickle homolog 2 (Drosophila)	AK032631|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134460|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr5_-_52957466_52957483	17.1498	FOXD3.p2	AK122570|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr7_+_19876447_19876478	17.1121	FOXD3.p2	NM_001025364|Rtn2|20167|reticulon 2 (Z-band associated protein)	AK160500|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038539|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr2_+_152561983_152562076	17.0936	FOXD3.p2	M31885|Id1|15901|inhibitor of DNA binding 1	AK008264|Id1|15901|inhibitor of DNA binding 1	BC025073|Id1|15901|inhibitor of DNA binding 1	NM_010495|Id1|15901|inhibitor of DNA binding 1	U43884|Id1|15901|inhibitor of DNA binding 1	AB221668|Id1|15901|inhibitor of DNA binding 1	CT010243|Id1|15901|inhibitor of DNA binding 1
mm9_v1_chrX_-_147248815_147248863	17.0784	FOXD3.p2	AJ277114|Maged2|80884|melanoma antigen, family D, 2	NM_030700|Maged2|80884|melanoma antigen, family D, 2	AK169006|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr8_+_46744023_46744252	16.9986	FOXD3.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr11_+_97702093_97702093	16.9645	FOXD3.p2	NM_001080935|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene
mm9_v1_chr16_-_31314534_31314685	16.8857	FOXD3.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr8_-_26895633_26895758	16.8846	FOXD3.p2	BC058518|Bag4|67384|BCL2-associated athanogene 4	AK162658|Bag4|67384|BCL2-associated athanogene 4	BC037239|Bag4|67384|BCL2-associated athanogene 4	AK010765|Bag4|67384|BCL2-associated athanogene 4	AK136899|Bag4|67384|BCL2-associated athanogene 4	AK160316|Bag4|67384|BCL2-associated athanogene 4	AF332863|Bag4|67384|BCL2-associated athanogene 4	NM_026121|Bag4|67384|BCL2-associated athanogene 4	BC138201|Bag4|67384|BCL2-associated athanogene 4	BC145986|Bag4|67384|BCL2-associated athanogene 4
mm9_v1_chr1_-_194681914_194681945	16.8763	FOXD3.p2	BC060251|Sertad4|214791|SERTA domain containing 4	NM_198247|Sertad4|214791|SERTA domain containing 4
mm9_v1_chr1_-_137064124_137064257	16.826	FOXD3.p2	AK158275|Gpr37l1|171469|G protein-coupled receptor 37-like 1	NM_134438|Gpr37l1|171469|G protein-coupled receptor 37-like 1
mm9_v1_chr7_-_116651647_116651647	16.6468	FOXD3.p2	AY572454|Trim66|330627|tripartite motif-containing 66	AY572455|Trim66|330627|tripartite motif-containing 66	NM_001170912|Trim66|330627|tripartite motif-containing 66	NM_181853|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr10_+_96942124_96942154	16.6149	FOXD3.p2	NM_001190451|Dcn|13179|decorin
mm9_v1_chr7_-_51920870_51920872	16.3366	FOXD3.p2	AY205605|Myh14|71960|myosin, heavy polypeptide 14	EF602040|Myh14|71960|myosin, heavy polypeptide 14	NM_028021|Myh14|71960|myosin, heavy polypeptide 14
mm9_v1_chr5_-_5265981_5266073	16.3334	FOXD3.p2	AK083269|Cdk14|18647|cyclin-dependent kinase 14	AK139386|Cdk14|18647|cyclin-dependent kinase 14	BC068134|Cdk14|18647|cyclin-dependent kinase 14	AK138437|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr14_+_76354807_76354815	16.2026	FOXD3.p2	AK004465|Kctd4|67516|potassium channel tetramerisation domain containing 4	NM_026214|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK008741|Kctd4|67516|potassium channel tetramerisation domain containing 4
mm9_v1_chr1_-_79436564_79436664	16.0599	FOXD3.p2	BC048249|Scg2|20254|secretogranin II	BC014717|Scg2|20254|secretogranin II	NM_009129|Scg2|20254|secretogranin II
mm9_v1_chr2_+_106533281_106533425	16.0241	FOXD3.p2	AK165186|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr5_-_51848420_51848454	15.9059	FOXD3.p2	AK032149|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK082685|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	AK043827|Ppargc1a|19017|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm9_v1_chr11_-_41814008_41814185	15.903	FOXD3.p2	M86572|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	BC031762|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	M62374|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_008073|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK034338|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr7_-_148615247_148615354	15.8624	FOXD3.p2	AF243130|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK005092|Cend1|57754|cell cycle exit and neuronal differentiation 1	BC023032|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK079045|Cend1|57754|cell cycle exit and neuronal differentiation 1	NM_021316|Cend1|57754|cell cycle exit and neuronal differentiation 1
mm9_v1_chr6_-_42643001_42643085	15.8086	FOXD3.p2	AK076242|Fam115a|77574|family with sequence similarity 115, member A	AK013025|Fam115a|77574|family with sequence similarity 115, member A	AK148593|Fam115a|77574|family with sequence similarity 115, member A	AK053509|Fam115a|77574|family with sequence similarity 115, member A	NM_029930|Fam115a|77574|family with sequence similarity 115, member A	BC031718|Fam115a|77574|family with sequence similarity 115, member A
mm9_v1_chr8_-_87298118_87298267	15.4703	FOXD3.p2	AK158568|Nfix|18032|nuclear factor I/X	NM_001081981|Nfix|18032|nuclear factor I/X
mm9_v1_chr1_+_137904795_137904795	15.2325	FOXD3.p2	NM_001160145|Tmem9|66241|transmembrane protein 9
mm9_v1_chrX_+_133371611_133371673	15.2314	FOXD3.p2	AK199492|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr18_-_25912171_25912250	15.1314	FOXD3.p2	AK044072|Celf4|108013|CUGBP, Elav-like family member 4	AK051458|Celf4|108013|CUGBP, Elav-like family member 4	AF515450|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr9_-_21822333_21822348	15.0979	FOXD3.p2	AK078068|Elavl3|15571|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm9_v1_chr6_+_141472906_141473070	14.984	FOXD3.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr18_+_82754829_82754843	14.8501	FOXD3.p2	AK193989|Mbp|17196|myelin basic protein	AK198113|Mbp|17196|myelin basic protein	AK200233|Mbp|17196|myelin basic protein	AK200632|Mbp|17196|myelin basic protein	AK201435|Mbp|17196|myelin basic protein	AK201834|Mbp|17196|myelin basic protein	AK202354|Mbp|17196|myelin basic protein	AK209511|Mbp|17196|myelin basic protein
mm9_v1_chr6_+_135148004_135148077	14.8334	FOXD3.p2	AK169892|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	NM_028982|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137674|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK018428|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK155128|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK039401|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC079676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene
mm9_v1_chr9_-_53822931_53822996	14.7542	FOXD3.p2	BC049160|Elmod1|270162|ELMO domain containing 1	AK029207|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr19_-_42160732_42160861	14.6896	FOXD3.p2	AK180979|Morn4|226123|MORN repeat containing 4	AK214121|Morn4|226123|MORN repeat containing 4	BC023055|Morn4|226123|MORN repeat containing 4	AK159230|Morn4|226123|MORN repeat containing 4	AK154147|Morn4|226123|MORN repeat containing 4	NM_198108|Morn4|226123|MORN repeat containing 4
mm9_v1_chr7_-_151627653_151627692	14.6569	FOXD3.p2	AK180662|Cttn|13043|cortactin	AK185163|Cttn|13043|cortactin	AK207194|Cttn|13043|cortactin
mm9_v1_chr3_+_90346956_90347018	14.6335	FOXD3.p2	AK002991|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr9_+_43901941_43901990	14.6063	FOXD3.p2	AK047204|Usp2|53376|ubiquitin specific peptidase 2	AK081112|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr6_+_34659440_34659540	14.4876	FOXD3.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr9_-_108363911_108363911	14.4829	FOXD3.p2	AK019849|Klhdc8b|78267|kelch domain containing 8B	NM_030075|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr4_-_144311306_144311306	14.4212	FOXD3.p2	NM_001085536|Gm13178|546849|predicted gene 13178
mm9_v1_chr15_+_91991704_91991862	14.3678	FOXD3.p2	NM_001159647|Cntn1|12805|contactin 1	BC066864|Cntn1|12805|contactin 1
mm9_v1_chr11_-_79317471_79317554	14.259	FOXD3.p2	BC024757|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr9_+_92502908_92503003	14.2521	FOXD3.p2	AK218100|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr12_-_73509925_73510040	14.2475	FOXD3.p2	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr12_+_118896501_118896507	14.2053	FOXD3.p2	AK083591|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr1_+_92100572_92100639	14.1081	FOXD3.p2	AK031100|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	NM_007722|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	AF000236|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	BC015254|Cxcr7|12778|chemokine (C-X-C motif) receptor 7
mm9_v1_chr17_+_75578120_75578285	14.0976	FOXD3.p2	AK036047|Ltbp1|268977|latent transforming growth factor beta binding protein 1	NM_206958|Ltbp1|268977|latent transforming growth factor beta binding protein 1	AF280604|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr18_-_23197156_23197163	13.8368	FOXD3.p2	BC056377|Nol4|319211|nucleolar protein 4	NM_001161483|Nol4|319211|nucleolar protein 4
mm9_v1_chr12_+_110800212_110800261	13.7542	FOXD3.p2	AK018142|Meg3|17263|maternally expressed 3
mm9_v1_chr15_-_101700048_101700137	13.7372	FOXD3.p2	BC107395|Krt77|406220|keratin 77	BC107396|Krt77|406220|keratin 77	NM_001003667|Krt77|406220|keratin 77	BC141259|Krt77|406220|keratin 77	AK132513|Krt77|406220|keratin 77
mm9_v1_chr7_+_25055436_25055599	13.7158	FOXD3.p2	AK132229|Zfp93|22755|zinc finger protein 93	NM_009567|Zfp93|22755|zinc finger protein 93	U46186|Zfp93|22755|zinc finger protein 93	AK146095|Zfp93|22755|zinc finger protein 93	AK165630|Zfp93|22755|zinc finger protein 93	AK040325|Zfp93|22755|zinc finger protein 93	AK028905|Zfp93|22755|zinc finger protein 93
mm9_v1_chr6_+_54402876_54402876	13.6694	FOXD3.p2	NM_001167860|Wipf3|330319|WAS/WASL interacting protein family, member 3	NM_001167861|Wipf3|330319|WAS/WASL interacting protein family, member 3
mm9_v1_chr2_+_14525932_14526000	13.6524	FOXD3.p2	AK034054|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	NM_023116|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	FM872408|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	BC109156|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	BC109157|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit
mm9_v1_chr12_+_39506844_39506916	13.4922	FOXD3.p2	NM_007960|Etv1|14009|ets variant gene 1	L10426|Etv1|14009|ets variant gene 1	AK144713|Etv1|14009|ets variant gene 1	BC005645|Etv1|14009|ets variant gene 1
mm9_v1_chr10_-_82996799_82996825	13.4153	FOXD3.p2	AK046198|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2	BC034531|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2	AK086413|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2
mm9_v1_chr8_-_67171692_67171792	13.4142	FOXD3.p2	U23184|Cpe|12876|carboxypeptidase E	X61232|Cpe|12876|carboxypeptidase E
mm9_v1_chr14_+_4126976_4126976	13.3879	FOXD3.p2	BC093494|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790	NM_001029930|ENSMUSG00000068790|545007|predicted gene, ENSMUSG00000068790
mm9_v1_chr17_-_45724536_45724608	13.3475	FOXD3.p2	AK198320|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK212529|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chr7_-_25084361_25084383	13.3364	FOXD3.p2	AK149960|Zfp61|22719|zinc finger protein 61	AK148158|Zfp61|22719|zinc finger protein 61
mm9_v1_chr7_-_52230091_52230104	13.329	FOXD3.p2	AK087747|Cpt1c|78070|carnitine palmitoyltransferase 1c	BC083317|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr7_+_53693190_53693196	13.1106	FOXD3.p2	AK079373|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr2_+_152512797_152512937	12.9591	FOXD3.p2	AK010255|Mcts2|66405|malignant T cell amplified sequence 2	NM_025543|Mcts2|66405|malignant T cell amplified sequence 2	BC027507|Mcts2|66405|malignant T cell amplified sequence 2	AK002563|Mcts2|66405|malignant T cell amplified sequence 2	AK028001|Mcts2|66405|malignant T cell amplified sequence 2
mm9_v1_chr16_-_10447440_10447456	12.9145	FOXD3.p2	BC068110|Fam18a|383103|family with sequence similarity 18, member A	NM_001013778|Fam18a|383103|family with sequence similarity 18, member A
mm9_v1_chr9_-_91255831_91255857	12.8959	FOXD3.p2	AK141431|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chr16_-_38433223_38433224	12.8109	FOXD3.p2	BC030670|Pla1a|85031|phospholipase A1 member A	AF063498|Pla1a|85031|phospholipase A1 member A	NM_134102|Pla1a|85031|phospholipase A1 member A
mm9_v1_chr17_-_15963372_15963555	12.7787	FOXD3.p2	BC138890|Rgmb|68799|RGM domain family, member B	AK035713|Rgmb|68799|RGM domain family, member B	AK046637|Rgmb|68799|RGM domain family, member B	AK080819|Rgmb|68799|RGM domain family, member B	BC096024|Rgmb|68799|RGM domain family, member B	AK030386|Rgmb|68799|RGM domain family, member B	AK047390|Rgmb|68799|RGM domain family, member B	BC030405|Rgmb|68799|RGM domain family, member B	AJ557514|Rgmb|68799|RGM domain family, member B	NM_178615|Rgmb|68799|RGM domain family, member B
mm9_v1_chr10_-_82996846_82996884	12.7141	FOXD3.p2	AK141954|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2	NM_153543|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2
mm9_v1_chr2_+_59192308_59192366	12.6342	FOXD3.p2	AK021168|Pkp4|227937|plakophilin 4
mm9_v1_chr8_-_113426341_113426387	12.6288	FOXD3.p2	AK140503|Fuk|234730|fucokinase	AK164340|Fuk|234730|fucokinase	AJ297482|Fuk|234730|fucokinase	AJ534942|Fuk|234730|fucokinase	AY223865|Fuk|234730|fucokinase	NM_172283|Fuk|234730|fucokinase	NM_181666|Fuk|234730|fucokinase	AK161763|Fuk|234730|fucokinase
mm9_v1_chr13_-_64468380_64468393	12.5943	FOXD3.p2	Y18465|Ctsl|13039|cathepsin L
mm9_v1_chr10_+_127759711_127759783	12.5467	FOXD3.p2	AK213625|Cnpy2|56530|canopy 2 homolog (zebrafish)	BC008261|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK007914|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK013568|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK180663|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chrX_+_10173557_10173565	12.5342	FOXD3.p2	
mm9_v1_chr6_+_90424727_90424917	12.4649	FOXD3.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr9_-_108363229_108363406	12.4388	FOXD3.p2	AK157991|Klhdc8b|78267|kelch domain containing 8B	AK087143|Klhdc8b|78267|kelch domain containing 8B	AK154428|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chrX_+_102318792_102318798	12.3941	FOXD3.p2	AK209904|Magee1|107528|melanoma antigen, family E, 1
mm9_v1_chr7_+_19868009_19868016	12.3929	FOXD3.p2	AK144271|Rtn2|20167|reticulon 2 (Z-band associated protein)	BC031370|Rtn2|20167|reticulon 2 (Z-band associated protein)	NM_013648|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038538|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr3_-_148617598_148617598	12.3794	FOXD3.p2	NM_001081298|Lphn2|99633|latrophilin 2
mm9_v1_chr10_+_96942181_96942256	12.346	FOXD3.p2	X53929|Dcn|13179|decorin	AK135287|Dcn|13179|decorin	AK145905|Dcn|13179|decorin	AK161788|Dcn|13179|decorin	AK165408|Dcn|13179|decorin
mm9_v1_chr2_+_103935948_103936036	12.3289	FOXD3.p2	NM_001111060|Cd59a|12509|CD59a antigen	NM_007652|Cd59a|12509|CD59a antigen	AK005507|Cd59a|12509|CD59a antigen	AK018136|Cd59a|12509|CD59a antigen	AK002743|Cd59a|12509|CD59a antigen	AK080728|Cd59a|12509|CD59a antigen	U60473|Cd59a|12509|CD59a antigen
mm9_v1_chr17_-_33170297_33170352	12.3046	FOXD3.p2	BC056193|Zfp763|73451|zinc finger protein 763	AK088750|Zfp763|73451|zinc finger protein 763	AK141711|Zfp763|73451|zinc finger protein 763	NM_028543|Zfp763|73451|zinc finger protein 763
mm9_v1_chr9_-_53823107_53823121	12.2482	FOXD3.p2	AK132239|Elmod1|270162|ELMO domain containing 1	NM_177769|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr11_+_44431601_44431727	12.2191	FOXD3.p2	AK141175|Ebf1|13591|early B-cell factor 1	AK051438|Ebf1|13591|early B-cell factor 1	AK139021|Ebf1|13591|early B-cell factor 1	AK031239|Ebf1|13591|early B-cell factor 1	L12147|Ebf1|13591|early B-cell factor 1	NM_007897|Ebf1|13591|early B-cell factor 1	BC139362|Ebf1|13591|early B-cell factor 1	BC139364|Ebf1|13591|early B-cell factor 1	AK137389|Ebf1|13591|early B-cell factor 1	AK035781|Ebf1|13591|early B-cell factor 1
mm9_v1_chr11_+_78312621_78312770	12.1586	FOXD3.p2	NM_011707|Vtn|22370|vitronectin	AK011736|Vtn|22370|vitronectin	AK090325|Vtn|22370|vitronectin	AK167494|Vtn|22370|vitronectin
mm9_v1_chr5_+_136108487_136108731	12.0083	FOXD3.p2	AK140006|Rhbdd2|215160|rhomboid domain containing 2	AK141182|Rhbdd2|215160|rhomboid domain containing 2	NM_146002|Rhbdd2|215160|rhomboid domain containing 2	AK165926|Rhbdd2|215160|rhomboid domain containing 2	AK041845|Rhbdd2|215160|rhomboid domain containing 2	AK030434|Rhbdd2|215160|rhomboid domain containing 2	AK043674|Rhbdd2|215160|rhomboid domain containing 2	BC018360|Rhbdd2|215160|rhomboid domain containing 2	BC028957|Rhbdd2|215160|rhomboid domain containing 2	AK189822|Rhbdd2|215160|rhomboid domain containing 2	AK212798|Rhbdd2|215160|rhomboid domain containing 2
mm9_v1_chr6_-_137519272_137519292	11.979	FOXD3.p2	AK155022|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr10_+_127759640_127759648	11.9111	FOXD3.p2	AK013014|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK019927|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr18_+_37849488_37849707	11.8686	FOXD3.p2	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr1_-_99873795_99873812	11.8185	FOXD3.p2	BC129869|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr8_-_108282498_108282528	11.8169	FOXD3.p2	AK017684|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	AK141521|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	NM_027469|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	BC013623|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2
mm9_v1_chr14_+_84843366_84843370	11.7408	FOXD3.p2	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr18_+_37854011_37854154	11.7166	FOXD3.p2	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr7_-_91520991_91521040	11.6438	FOXD3.p2	AK032628|Arnt2|11864|aryl hydrocarbon receptor nuclear translocator 2
mm9_v1_chr3_-_117571789_117571835	11.6222	FOXD3.p2	AK170966|Snx7|76561|sorting nexin 7	AK052487|Snx7|76561|sorting nexin 7	AK011015|Snx7|76561|sorting nexin 7
mm9_v1_chr11_-_116668593_116668695	11.5812	FOXD3.p2	
mm9_v1_chr11_+_28753190_28753243	11.5592	FOXD3.p2	AK077302|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	NM_146015|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1	AY251056|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr7_+_135047561_135047646	11.5395	FOXD3.p2	NM_009739|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150607|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150723|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK167519|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK145479|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	BC046595|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr6_-_142650737_142650793	11.4953	FOXD3.p2	D86037|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	D86038|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	AF003531|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	U97066|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_001044720|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_011511|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021041|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021042|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
mm9_v1_chr18_+_23656024_23656160	11.4904	FOXD3.p2	AK147359|Dtna|13527|dystrobrevin alpha	BC050765|Dtna|13527|dystrobrevin alpha	AK131649|Dtna|13527|dystrobrevin alpha	X95226|Dtna|13527|dystrobrevin alpha
mm9_v1_chr3_+_5218545_5218658	11.4879	FOXD3.p2	AK084213|Zfhx4|80892|zinc finger homeodomain 4	BC061199|Zfhx4|80892|zinc finger homeodomain 4	NM_030708|Zfhx4|80892|zinc finger homeodomain 4	AK044540|Zfhx4|80892|zinc finger homeodomain 4
mm9_v1_chr4_-_147016606_147016616	11.4878	FOXD3.p2	BC058858|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene	NM_145078|2610305D13Rik|112422|RIKEN cDNA 2610305D13 gene
mm9_v1_chr15_+_34167780_34167904	11.4546	FOXD3.p2	NM_033521|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK077933|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	EU561010|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK166014|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK082807|Laptm4b|114128|lysosomal-associated protein transmembrane 4B	AK146868|Laptm4b|114128|lysosomal-associated protein transmembrane 4B
mm9_v1_chr19_-_57083064_57083064	11.3116	FOXD3.p2	NM_001177796|Afap1l2|226250|actin filament associated protein 1-like 2	NM_001177797|Afap1l2|226250|actin filament associated protein 1-like 2	NM_146102|Afap1l2|226250|actin filament associated protein 1-like 2
mm9_v1_chr1_+_45368443_45368526	11.3071	FOXD3.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr19_+_54003803_54003809	11.3005	FOXD3.p2	AK050175|Pdcd4|18569|programmed cell death 4
mm9_v1_chr4_+_145850602_145850602	11.2604	FOXD3.p2	NM_001177767|Gm13138|100043034|predicted gene 13138	NM_009051|Rex2|19715|reduced expression 2
mm9_v1_chr4_+_146395958_146395958	11.2604	FOXD3.p2	NM_001177767|Gm13138|100043034|predicted gene 13138	NM_009051|Rex2|19715|reduced expression 2
mm9_v1_chr2_+_91386476_91386497	11.2595	FOXD3.p2	BC017140|Ckap5|75786|cytoskeleton associated protein 5	BC089032|Ckap5|75786|cytoskeleton associated protein 5	NM_001165989|Ckap5|75786|cytoskeleton associated protein 5	NM_029437|Ckap5|75786|cytoskeleton associated protein 5	BC138334|Ckap5|75786|cytoskeleton associated protein 5	BC096422|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr3_-_116671869_116671896	11.2282	FOXD3.p2	NM_023245|Palmd|114301|palmdelphin
mm9_v1_chr16_-_28753276_28753293	11.1383	FOXD3.p2	BC030485|Fgf12|14167|fibroblast growth factor 12	AF020739|Fgf12|14167|fibroblast growth factor 12	NM_010199|Fgf12|14167|fibroblast growth factor 12
mm9_v1_chr9_-_117161564_117161606	11.0944	FOXD3.p2	BC108402|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK052196|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK032938|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK081921|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK051776|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK041098|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172122|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172123|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172124|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172126|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_178660|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr10_+_127759512_127759609	11.0879	FOXD3.p2	AF186115|Cnpy2|56530|canopy 2 homolog (zebrafish)	NM_019953|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK150953|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr11_-_6333725_6333827	11.0653	FOXD3.p2	AK178770|H2afv|77605|H2A histone family, member V
mm9_v1_chr8_-_113329771_113329802	11.0321	FOXD3.p2	AK008082|Il34|76527|interleukin 34	BC016254|Il34|76527|interleukin 34	NM_001135100|Il34|76527|interleukin 34	NM_029646|Il34|76527|interleukin 34
mm9_v1_chr1_-_45559866_45559893	11.0066	FOXD3.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chrX_+_54043764_54043779	10.967	FOXD3.p2	BC055725|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr10_+_20760625_20760625	10.9477	FOXD3.p2	AK161335|Ahi1|52906|Abelson helper integration site 1	NM_001177776|Ahi1|52906|Abelson helper integration site 1
mm9_v1_chr9_-_101154160_101154163	10.903	FOXD3.p2	NM_001161362|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr3_-_117571853_117571885	10.8746	FOXD3.p2	AK038971|Snx7|76561|sorting nexin 7	NM_001190156|Snx7|76561|sorting nexin 7	NM_029655|Snx7|76561|sorting nexin 7
mm9_v1_chr5_+_29972960_29973052	10.7911	FOXD3.p2	AK185151|Ube3c|100763|ubiquitin protein ligase E3C	AK203997|Ube3c|100763|ubiquitin protein ligase E3C	AK049125|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr11_-_36757743_36757744	10.7711	FOXD3.p2	BC141361|Odz2|23964|odd Oz/ten-m homolog 2 (Drosophila)	NM_011856|Odz2|23964|odd Oz/ten-m homolog 2 (Drosophila)
mm9_v1_chr15_-_90764873_90764944	10.768	FOXD3.p2	AK052821|Kif21a|16564|kinesin family member 21A	AK047208|Kif21a|16564|kinesin family member 21A
mm9_v1_chr7_+_30569807_30569808	10.7565	FOXD3.p2	BC049120|Zfp30|22693|zinc finger protein 30	AY605122|Zfp30|22693|zinc finger protein 30	NM_013705|Zfp30|22693|zinc finger protein 30	Z30174|Zfp30|22693|zinc finger protein 30
mm9_v1_chr16_+_35002066_35002125	10.7442	FOXD3.p2	BC062265|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr15_-_37722161_37722182	10.7418	FOXD3.p2	AK048440|Ncald|52589|neurocalcin delta	NM_134094|Ncald|52589|neurocalcin delta
mm9_v1_chr14_+_14286471_14286627	10.6981	FOXD3.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr11_-_97372344_97372370	10.6826	FOXD3.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr3_+_90341208_90341304	10.6736	FOXD3.p2	AK160178|S100a16|67860|S100 calcium binding protein A16	AK009762|S100a16|67860|S100 calcium binding protein A16	AK160512|S100a16|67860|S100 calcium binding protein A16	AK167006|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr18_-_43847367_43847426	10.6492	FOXD3.p2	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chrX_-_132602648_132602774	10.5347	FOXD3.p2	AF097439|Bex2|12069|brain expressed X-linked 2	BC027529|Bex2|12069|brain expressed X-linked 2	AK132005|Bex2|12069|brain expressed X-linked 2	NM_009749|Bex2|12069|brain expressed X-linked 2
mm9_v1_chr13_+_51942043_51942063	10.4767	FOXD3.p2	NM_011817|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AK002237|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AK007410|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AB021884|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	BC001989|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AF055638|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma
mm9_v1_chr7_+_137720997_137721002	10.4484	FOXD3.p2	AY177410|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_001004468|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_206856|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	BC109016|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr13_-_13097649_13097665	10.3808	FOXD3.p2	BC064771|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC080826|Prl2c2|18811|prolactin family 2, subfamily c, member 2
mm9_v1_chr14_+_120724380_120724561	10.3569	FOXD3.p2	BC020406|Mbnl2|105559|muscleblind-like 2	BC026711|Mbnl2|105559|muscleblind-like 2	GQ906534|Mbnl2|105559|muscleblind-like 2	AK216404|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr9_+_54442900_54442929	10.3525	FOXD3.p2	AK003393|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK146717|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha
mm9_v1_chr4_+_149022081_149022141	10.3364	FOXD3.p2	AK007691|Clstn1|65945|calsyntenin 1
mm9_v1_chr1_-_45560001_45560126	10.2917	FOXD3.p2	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr13_-_13097596_13097637	10.2555	FOXD3.p2	K02245|Prl2c2|18811|prolactin family 2, subfamily c, member 2	NM_031191|Prl2c2|18811|prolactin family 2, subfamily c, member 2	X75557|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC145439|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC100300|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC056203|Prl2c2|18811|prolactin family 2, subfamily c, member 2
mm9_v1_chr6_+_115494665_115494729	10.1973	FOXD3.p2	BC061473|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	NM_199033|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	AK044190|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	AK134697|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr11_-_102017662_102017746	10.194	FOXD3.p2	AK012106|Tmem101|76547|transmembrane protein 101	AK041154|Tmem101|76547|transmembrane protein 101	BC011109|Tmem101|76547|transmembrane protein 101	AK049378|Tmem101|76547|transmembrane protein 101	AK140260|Tmem101|76547|transmembrane protein 101	NM_029649|Tmem101|76547|transmembrane protein 101
mm9_v1_chr11_-_79317583_79317590	10.1815	FOXD3.p2	NM_019409|Omg|18377|oligodendrocyte myelin glycoprotein	AK136910|Omg|18377|oligodendrocyte myelin glycoprotein
mm9_v1_chr10_-_83989221_83989289	10.129	FOXD3.p2	AK205593|Ckap4|216197|cytoskeleton-associated protein 4	AK212843|Ckap4|216197|cytoskeleton-associated protein 4	AK217343|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr10_+_94039007_94039007	10.0723	FOXD3.p2	NM_177026|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr1_-_45559904_45559916	9.94248	FOXD3.p2	AK147220|Col5a2|12832|collagen, type V, alpha 2	AK080811|Col5a2|12832|collagen, type V, alpha 2	AK084285|Col5a2|12832|collagen, type V, alpha 2	AK132413|Col5a2|12832|collagen, type V, alpha 2	AK151929|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr11_-_90252228_90252237	9.92555	FOXD3.p2	NM_172563|Hlf|217082|hepatic leukemia factor
mm9_v1_chr15_-_78685925_78685959	9.89763	FOXD3.p2	BC027504|Lgals2|107753|lectin, galactose-binding, soluble 2	AK007364|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008607|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008423|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008636|Lgals2|107753|lectin, galactose-binding, soluble 2	AK008648|Lgals2|107753|lectin, galactose-binding, soluble 2	NM_025622|Lgals2|107753|lectin, galactose-binding, soluble 2
mm9_v1_chr13_-_12892317_12892348	9.80925	FOXD3.p2	BC100299|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC058816|Prl2c4|26421|prolactin family 2, subfamily c, member 4	NM_011954|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC064772|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC132078|Prl2c3|18812|prolactin family 2, subfamily c, member 3	BC132080|Prl2c3|18812|prolactin family 2, subfamily c, member 3	AK145995|Prl2c3|18812|prolactin family 2, subfamily c, member 3	K03235|Prl2c3|18812|prolactin family 2, subfamily c, member 3	AK164068|Prl2c3|18812|prolactin family 2, subfamily c, member 3	NM_011118|Prl2c3|18812|prolactin family 2, subfamily c, member 3
mm9_v1_chr11_-_90252208_90252214	9.80477	FOXD3.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr8_-_11199802_11199859	9.78841	FOXD3.p2	X92439|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr9_-_58589362_58589365	9.73368	FOXD3.p2	AK010725|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene	BC038688|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene	NM_028598|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene
mm9_v1_chrX_+_38754568_38754592	9.72132	FOXD3.p2	AK138615|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr11_-_69648350_69648356	9.59114	FOXD3.p2	AK173159|Nlgn2|216856|neuroligin 2	NM_198862|Nlgn2|216856|neuroligin 2
mm9_v1_chr10_+_69487700_69487703	9.58668	FOXD3.p2	AK033919|Ank3|11735|ankyrin 3, epithelial	AK036171|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr14_-_100548982_100549014	9.52194	FOXD3.p2	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chr6_+_129483295_129483425	9.43164	FOXD3.p2	AK006103|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK014083|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK015049|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr14_-_109313298_109313300	9.35414	FOXD3.p2	AK144290|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr10_+_115580947_115580958	9.354	FOXD3.p2	Z30313|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr18_-_58169723_58169818	9.29875	FOXD3.p2	BC063774|Fbn2|14119|fibrillin 2
mm9_v1_chr2_+_180701948_180701963	9.29144	FOXD3.p2	AK168007|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK168602|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr3_+_87422672_87422672	9.28817	FOXD3.p2	BC079565|Arhgef11|213498|Rho guanine nucleotide exchange factor (GEF) 11	NM_001003912|Arhgef11|213498|Rho guanine nucleotide exchange factor (GEF) 11
mm9_v1_chr12_-_42212538_42212554	9.2752	FOXD3.p2	AK036316|Lrrn3|16981|leucine rich repeat protein 3, neuronal	D49802|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr15_-_3421486_3421486	9.26023	FOXD3.p2	M31680|Ghr|14600|growth hormone receptor	M33324|Ghr|14600|growth hormone receptor	NM_001048147|Ghr|14600|growth hormone receptor
mm9_v1_chr10_+_75931622_75931715	9.24496	FOXD3.p2	AK122313|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AJ006590|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AK051901|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	BC052452|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	NM_019434|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
mm9_v1_chr3_-_129035406_129035666	9.24487	FOXD3.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr7_+_135047661_135047661	9.23373	FOXD3.p2	AK075602|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr9_+_20673069_20673163	9.19728	FOXD3.p2	BC031510|A230050P20Rik|319278|RIKEN cDNA A230050P20 gene	NM_175687|A230050P20Rik|319278|RIKEN cDNA A230050P20 gene	AK157146|A230050P20Rik|319278|RIKEN cDNA A230050P20 gene	AK149161|A230050P20Rik|319278|RIKEN cDNA A230050P20 gene	BC043448|A230050P20Rik|319278|RIKEN cDNA A230050P20 gene
mm9_v1_chr3_+_55265654_55265683	9.19326	FOXD3.p2	NM_001111051|Dclk1|13175|doublecortin-like kinase 1	NM_001111052|Dclk1|13175|doublecortin-like kinase 1	NM_001195539|Dclk1|13175|doublecortin-like kinase 1	NM_001195540|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr8_-_49760037_49760043	9.17978	FOXD3.p2	BC145284|Odz3|23965|odd Oz/ten-m homolog 3 (Drosophila)	AB025412|Odz3|23965|odd Oz/ten-m homolog 3 (Drosophila)	NM_001145937|Odz3|23965|odd Oz/ten-m homolog 3 (Drosophila)	NM_011857|Odz3|23965|odd Oz/ten-m homolog 3 (Drosophila)
mm9_v1_chr16_-_5008915_5008934	9.1765	FOXD3.p2	
mm9_v1_chr2_-_155755998_155756045	9.16957	FOXD3.p2	BC050884|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	BC057570|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	AK139488|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)	NM_018888|Uqcc|56046|ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast)
mm9_v1_chr7_+_30969184_30969226	9.1693	FOXD3.p2	AK079950|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1	NM_009944|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1	BC060974|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1	AF037370|Cox7a1|12865|cytochrome c oxidase, subunit VIIa 1
mm9_v1_chr5_-_134932407_134932628	9.16239	FOXD3.p2	BC057091|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC058964|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF247161|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497637|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497638|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497639|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343348|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343351|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497640|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK078488|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343350|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497642|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF343349|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF497641|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK051310|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF260133|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030287|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030288|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AY030289|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AF257475|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	AK147196|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	BC050822|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081462|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081463|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081464|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081466|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081467|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081468|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081469|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_001081470|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1	NM_020331|Gtf2ird1|57080|general transcription factor II I repeat domain-containing 1
mm9_v1_chrX_+_38754480_38754557	9.12224	FOXD3.p2	NM_016886|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC086678|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr7_-_151656610_151656667	9.09631	FOXD3.p2	U03184|Cttn|13043|cortactin	BC011434|Cttn|13043|cortactin	AK168871|Cttn|13043|cortactin	AK165555|Cttn|13043|cortactin	AK168699|Cttn|13043|cortactin	AK148010|Cttn|13043|cortactin	AK146856|Cttn|13043|cortactin	NM_007803|Cttn|13043|cortactin	AK084249|Cttn|13043|cortactin	AK168945|Cttn|13043|cortactin
mm9_v1_chr12_+_8928112_8928218	9.09317	FOXD3.p2	NM_008640|Laptm4a|17775|lysosomal-associated protein transmembrane 4A	U34259|Laptm4a|17775|lysosomal-associated protein transmembrane 4A
mm9_v1_chrX_-_42143327_42143373	9.06649	FOXD3.p2	AK038557|Dcaf12l1|245404|DDB1 and CUL4 associated factor 12-like 1	AK047360|Dcaf12l1|245404|DDB1 and CUL4 associated factor 12-like 1	NM_001190718|Dcaf12l1|245404|DDB1 and CUL4 associated factor 12-like 1	AK034472|Dcaf12l1|245404|DDB1 and CUL4 associated factor 12-like 1	NM_178739|Dcaf12l1|245404|DDB1 and CUL4 associated factor 12-like 1
mm9_v1_chrX_+_38754605_38754612	9.05698	FOXD3.p2	BC076584|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr14_+_69984344_69984396	9.02027	FOXD3.p2	AK195341|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK213430|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK218892|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK202804|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4
mm9_v1_chr6_-_101266541_101266557	9.01143	FOXD3.p2	AK020657|9530086O07Rik|78741|RIKEN cDNA 9530086O07 gene
mm9_v1_chr2_+_180701920_180701946	8.9661	FOXD3.p2	NM_001177707|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177708|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177709|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177710|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_145760|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK145879|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr17_-_90436488_90436574	8.95103	FOXD3.p2	AJ006802|Nrxn1|18189|neurexin I
mm9_v1_chr14_-_109313333_109313374	8.92259	FOXD3.p2	AK173296|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr11_+_92960603_92960762	8.88402	FOXD3.p2	AK036003|Car10|72605|carbonic anhydrase 10	NM_028296|Car10|72605|carbonic anhydrase 10	AK132222|Car10|72605|carbonic anhydrase 10
mm9_v1_chr6_+_30758582_30758676	8.86136	FOXD3.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr11_-_101163456_101163604	8.81559	FOXD3.p2	AK189474|Becn1|56208|beclin 1, autophagy related	AK178460|Becn1|56208|beclin 1, autophagy related	AK151531|Becn1|56208|beclin 1, autophagy related	BC005770|Becn1|56208|beclin 1, autophagy related	BC027738|Becn1|56208|beclin 1, autophagy related	AK028851|Becn1|56208|beclin 1, autophagy related	AK083800|Becn1|56208|beclin 1, autophagy related	AK031501|Becn1|56208|beclin 1, autophagy related	AK032176|Becn1|56208|beclin 1, autophagy related	AK050329|Becn1|56208|beclin 1, autophagy related	NM_019584|Becn1|56208|beclin 1, autophagy related	AK077392|Becn1|56208|beclin 1, autophagy related
mm9_v1_chrX_-_73119905_73119926	8.74195	FOXD3.p2	NM_145629|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr7_+_107789414_107789679	8.67822	FOXD3.p2	AK191812|Rab6|19346|RAB6, member RAS oncogene family
mm9_v1_chr7_-_140315100_140315165	8.67571	FOXD3.p2	NM_009980|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr8_-_27054528_27054658	8.67302	FOXD3.p2	
mm9_v1_chr6_+_77192839_77192971	8.6354	FOXD3.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr11_-_43239663_43239784	8.61318	FOXD3.p2	NM_001131054|Pttg1|30939|pituitary tumor-transforming gene 1	BC023324|Pttg1|30939|pituitary tumor-transforming gene 1
mm9_v1_chr8_+_56122680_56122847	8.61302	FOXD3.p2	BC023461|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr14_-_109313447_109313461	8.60145	FOXD3.p2	NM_199065|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr6_-_141804691_141804757	8.5914	FOXD3.p2	AB031814|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4	NM_030687|Slco1a4|28250|solute carrier organic anion transporter family, member 1a4
mm9_v1_chr16_-_28753298_28753313	8.58857	FOXD3.p2	AK018774|Fgf12|14167|fibroblast growth factor 12
mm9_v1_chr11_+_68933954_68933975	8.56382	FOXD3.p2	AK050791|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	BC134378|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	NM_033041|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	AB049065|Hes7|84653|hairy and enhancer of split 7 (Drosophila)
mm9_v1_chr2_+_180701966_180702005	8.53627	FOXD3.p2	BC027794|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC016228|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030295|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AJ401461|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC052922|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK089321|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK052985|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK134402|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC059817|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030520|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177706|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr3_+_121160714_121160815	8.49836	FOXD3.p2	AK181356|Cnn3|71994|calponin 3, acidic
mm9_v1_chr5_-_52957518_52957569	8.43065	FOXD3.p2	NM_144945|Lgi2|246316|leucine-rich repeat LGI family, member 2	AJ487515|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr9_+_118949880_118949887	8.41029	FOXD3.p2	AK138484|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AK171161|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm9_v1_chr11_-_50125157_50125288	8.39454	FOXD3.p2	L23865|Canx|12330|calnexin	L18888|Canx|12330|calnexin
mm9_v1_chr15_+_99800504_99800504	8.29719	FOXD3.p2	AK139636|Larp4|207214|La ribonucleoprotein domain family, member 4	NM_001080948|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr2_-_66512442_66512445	8.29655	FOXD3.p2	AK004093|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr1_+_59543450_59543567	8.27191	FOXD3.p2	
mm9_v1_chr1_+_34364633_34364780	8.26773	FOXD3.p2	AK009079|Dst|13518|dystonin
mm9_v1_chr19_+_10257363_10257524	8.26305	FOXD3.p2	NM_146094|Fads1|76267|fatty acid desaturase 1	BC026831|Fads1|76267|fatty acid desaturase 1	AK154367|Fads1|76267|fatty acid desaturase 1	BC022139|Fads1|76267|fatty acid desaturase 1	BC026848|Fads1|76267|fatty acid desaturase 1	AB072976|Fads1|76267|fatty acid desaturase 1	AK080706|Fads1|76267|fatty acid desaturase 1	AF061504|Fads1|76267|fatty acid desaturase 1	AK083959|Fads1|76267|fatty acid desaturase 1	BC063053|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr18_+_86882439_86882439	8.23069	FOXD3.p2	AK032112|Cbln2|12405|cerebellin 2 precursor protein	NM_172633|Cbln2|12405|cerebellin 2 precursor protein
mm9_v1_chr10_-_31329530_31329530	8.22078	FOXD3.p2	NM_001146349|Rnf217|268291|ring finger protein 217
mm9_v1_chr3_+_13471681_13471721	8.20338	FOXD3.p2	AK079659|Ralyl|76897|RALY RNA binding protein-like	AK032086|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr14_+_5153653_5153668	8.18368	FOXD3.p2	NM_175393|4930555G01Rik|108978|RIKEN cDNA 4930555G01 gene	AK076920|4930555G01Rik|108978|RIKEN cDNA 4930555G01 gene
mm9_v1_chr15_+_97962651_97962722	8.16405	FOXD3.p2	
mm9_v1_chr9_+_20673178_20673179	8.15232	FOXD3.p2	AK034516|A230050P20Rik|319278|RIKEN cDNA A230050P20 gene
mm9_v1_chr3_-_120966206_120966262	8.12202	FOXD3.p2	BC040365|Tmem56|99887|transmembrane protein 56	NM_178936|Tmem56|99887|transmembrane protein 56	AK149544|Tmem56|99887|transmembrane protein 56
mm9_v1_chr11_+_75570397_75570437	8.12071	FOXD3.p2	AK011612|Ywhae|22627|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm9_v1_chr19_+_23240506_23240595	8.1188	FOXD3.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr19_+_46227052_46227083	8.09536	FOXD3.p2	BC082336|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	AK019933|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	BC011335|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr2_+_163843744_163843775	8.07409	FOXD3.p2	
mm9_v1_chr18_+_82754586_82754645	8.05849	FOXD3.p2	AK194642|Mbp|17196|myelin basic protein
mm9_v1_chr4_-_136891931_136891995	8.05091	FOXD3.p2	AK213611|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	M79301|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L11318|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L78075|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr5_-_5265598_5265717	8.00756	FOXD3.p2	AK087398|Cdk14|18647|cyclin-dependent kinase 14	AK165149|Cdk14|18647|cyclin-dependent kinase 14	U62391|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr11_-_94644016_94644016	7.97649	FOXD3.p2	AK139848|Tmem92-ps|544806|transmembrane protein 92, pseudogene	NM_001034896|Tmem92-ps|544806|transmembrane protein 92, pseudogene
mm9_v1_chr15_-_82074765_82074852	7.97285	FOXD3.p2	NM_001080158|Cenpm|66570|centromere protein M
mm9_v1_chr15_-_36426471_36426537	7.96533	FOXD3.p2	AK088304|Ankrd46|68839|ankyrin repeat domain 46	AK148049|Ankrd46|68839|ankyrin repeat domain 46	BC094595|Ankrd46|68839|ankyrin repeat domain 46	BC086659|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr13_+_49703402_49703439	7.96172	FOXD3.p2	AK028300|Ogn|18295|osteoglycin	AK160760|Ogn|18295|osteoglycin	AK053650|Ogn|18295|osteoglycin	NM_008760|Ogn|18295|osteoglycin
mm9_v1_chr3_-_157587998_157588029	7.94374	FOXD3.p2	AK002480|Cth|107869|cystathionase (cystathionine gamma-lyase)	BC019483|Cth|107869|cystathionase (cystathionine gamma-lyase)	AY083352|Cth|107869|cystathionase (cystathionine gamma-lyase)	NM_145953|Cth|107869|cystathionase (cystathionine gamma-lyase)
mm9_v1_chr3_-_97692613_97692634	7.88001	FOXD3.p2	BC028274|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	BC141185|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	BC145504|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_001039376|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr16_+_17208227_17208227	7.86123	FOXD3.p2	NM_001033338|Rimbp3|239731|RIMS binding protein 3
mm9_v1_chr7_+_74792295_74792398	7.84542	FOXD3.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr2_-_79748552_79748555	7.84502	FOXD3.p2	AK014810|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AF159298|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AY845863|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AY845864|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001009978|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001009979|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr10_-_6080145_6080228	7.84497	FOXD3.p2	BC138365|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	BC138364|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB020886|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	BC071185|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AF326228|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB051563|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AB025278|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	AK053844|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12	NM_031185|Akap12|83397|A kinase (PRKA) anchor protein (gravin) 12
mm9_v1_chr3_+_129581477_129581610	7.84319	FOXD3.p2	BC051117|Pla2g12a|66350|phospholipase A2, group XIIA	AK010011|Pla2g12a|66350|phospholipase A2, group XIIA	NM_023196|Pla2g12a|66350|phospholipase A2, group XIIA	AY007381|Pla2g12a|66350|phospholipase A2, group XIIA	AK010174|Pla2g12a|66350|phospholipase A2, group XIIA	BC026812|Pla2g12a|66350|phospholipase A2, group XIIA	AK003183|Pla2g12a|66350|phospholipase A2, group XIIA	AK012414|Pla2g12a|66350|phospholipase A2, group XIIA	AK163693|Pla2g12a|66350|phospholipase A2, group XIIA
mm9_v1_chr16_+_57152994_57153228	7.81713	FOXD3.p2	BC025450|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)	AK011763|Tomm70a|28185|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm9_v1_chrX_+_133357268_133357438	7.79685	FOXD3.p2	AK160872|Plp1|18823|proteolipid protein (myelin) 1	AK134554|Plp1|18823|proteolipid protein (myelin) 1	M15442|Plp1|18823|proteolipid protein (myelin) 1	AK077564|Plp1|18823|proteolipid protein (myelin) 1	BC027010|Plp1|18823|proteolipid protein (myelin) 1	NM_011123|Plp1|18823|proteolipid protein (myelin) 1	AK192772|Plp1|18823|proteolipid protein (myelin) 1	AK203421|Plp1|18823|proteolipid protein (myelin) 1
mm9_v1_chr11_+_104189978_104190032	7.78473	FOXD3.p2	AK135147|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr2_+_136539143_136539198	7.77867	FOXD3.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr1_-_89470442_89470445	7.76737	FOXD3.p2	BC039279|Ngef|53972|neuronal guanine nucleotide exchange factor	NM_001111314|Ngef|53972|neuronal guanine nucleotide exchange factor
mm9_v1_chr16_+_35001358_35001362	7.76179	FOXD3.p2	AK171889|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr9_+_85739048_85739158	7.739	FOXD3.p2	AK050794|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr16_+_5885447_5885760	7.67615	FOXD3.p2	AB041596|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AK158194|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr16_-_13869955_13869977	7.66322	FOXD3.p2	AK075829|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1
mm9_v1_chr3_+_121747377_121747377	7.65445	FOXD3.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr7_+_106415956_106416023	7.64355	FOXD3.p2	BC053039|Mtap6|17760|microtubule-associated protein 6	NM_001048167|Mtap6|17760|microtubule-associated protein 6	NM_010837|Mtap6|17760|microtubule-associated protein 6	AK082709|Mtap6|17760|microtubule-associated protein 6	AK087413|Mtap6|17760|microtubule-associated protein 6
mm9_v1_chr9_-_117161234_117161295	7.62662	FOXD3.p2	AK030609|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK033005|Rbms3|207181|RNA binding motif, single stranded interacting protein	AK030478|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr7_-_67242493_67242503	7.61265	FOXD3.p2	NM_001082961|Snrpn|20646|small nuclear ribonucleoprotein N
mm9_v1_chr6_+_38553293_38553312	7.59369	FOXD3.p2	AK138070|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr12_+_72410755_72411027	7.58608	FOXD3.p2	NM_001190466|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	NM_021532|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	BC145833|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	AF488775|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	AY208970|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)
mm9_v1_chr2_-_165213726_165213791	7.54524	FOXD3.p2	BC040388|Zfp334|228876|zinc finger protein 334	NM_178411|Zfp334|228876|zinc finger protein 334
mm9_v1_chr4_+_106721017_106721031	7.54292	FOXD3.p2	AK144320|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr9_+_114976396_114976396	7.52729	FOXD3.p2	BC027256|Osbpl10|74486|oxysterol binding protein-like 10	NM_148958|Osbpl10|74486|oxysterol binding protein-like 10
mm9_v1_chr13_-_36826245_36826363	7.49927	FOXD3.p2	AK161859|Nrn1|68404|neuritin 1	BC035531|Nrn1|68404|neuritin 1	NM_153529|Nrn1|68404|neuritin 1
mm9_v1_chr10_-_57252184_57252250	7.47654	FOXD3.p2	BC017148|Serinc1|56442|serine incorporator 1	AK159280|Serinc1|56442|serine incorporator 1
mm9_v1_chr3_+_7366586_7366727	7.46239	FOXD3.p2	NM_008862|Pkia|18767|protein kinase inhibitor, alpha	BC048244|Pkia|18767|protein kinase inhibitor, alpha	AK139347|Pkia|18767|protein kinase inhibitor, alpha
mm9_v1_chr6_-_142456402_142456478	7.45492	FOXD3.p2	X51905|Ldhb|16832|lactate dehydrogenase B	AK002257|Ldhb|16832|lactate dehydrogenase B	BC087888|Ldhb|16832|lactate dehydrogenase B	BC046755|Ldhb|16832|lactate dehydrogenase B	NM_008492|Ldhb|16832|lactate dehydrogenase B	AK131637|Ldhb|16832|lactate dehydrogenase B	AK019391|Ldhb|16832|lactate dehydrogenase B
mm9_v1_chr1_+_45401303_45401332	7.42221	FOXD3.p2	AK159868|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr7_-_16457733_16457733	7.37896	FOXD3.p2	AK139691|Crx|12951|cone-rod homeobox containing gene	NM_001113330|Crx|12951|cone-rod homeobox containing gene
mm9_v1_chr17_-_37160143_37160232	7.36748	FOXD3.p2	AY566830|Mog|17441|myelin oligodendrocyte glycoprotein	BC080860|Mog|17441|myelin oligodendrocyte glycoprotein	U64572|Mog|17441|myelin oligodendrocyte glycoprotein	BC050763|Mog|17441|myelin oligodendrocyte glycoprotein	AK135036|Mog|17441|myelin oligodendrocyte glycoprotein
mm9_v1_chr6_-_148937854_148937926	7.36016	FOXD3.p2	AK143126|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr3_+_101266000_101266048	7.3582	FOXD3.p2	AK012857|Igsf3|78908|immunoglobulin superfamily, member 3
mm9_v1_chr18_-_67708826_67708826	7.33118	FOXD3.p2	BC058320|Spire1|68166|spire homolog 1 (Drosophila)	NM_176832|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr8_+_109127326_109127398	7.31403	FOXD3.p2	X06115|Cdh1|12550|cadherin 1
mm9_v1_chr5_-_52957343_52957374	7.27697	FOXD3.p2	AY841361|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr2_-_66278870_66278908	7.2543	FOXD3.p2	AK046001|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	AK134744|Scn1a|20265|sodium channel, voltage-gated, type I, alpha	NM_018733|Scn1a|20265|sodium channel, voltage-gated, type I, alpha
mm9_v1_chr9_+_65524331_65524426	7.24277	FOXD3.p2	AK169243|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	NM_010952|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK143231|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK146074|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK160444|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168853|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168662|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC055442|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC083114|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AF057298|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC005477|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC110690|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene
mm9_v1_chr19_+_23239333_23239507	7.2306	FOXD3.p2	AK177679|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr11_+_120151645_120151699	7.22155	FOXD3.p2	BC069995|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr7_-_149838254_149838314	7.19164	FOXD3.p2	AK146531|Igf2|16002|insulin-like growth factor 2
mm9_v1_chr1_-_39707919_39708026	7.19152	FOXD3.p2	BC116790|Creg2|263764|cellular repressor of E1A-stimulated genes 2	BC116792|Creg2|263764|cellular repressor of E1A-stimulated genes 2	AK044192|Creg2|263764|cellular repressor of E1A-stimulated genes 2	NM_170597|Creg2|263764|cellular repressor of E1A-stimulated genes 2
mm9_v1_chr2_+_174153230_174153414	7.18205	FOXD3.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chrX_+_132806184_132806337	7.15588	FOXD3.p2	L10905|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr6_+_129483238_129483284	7.14033	FOXD3.p2	BC004602|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr5_+_136293975_136293975	7.12886	FOXD3.p2	BC058385|Srrm3|58212|serine/arginine repetitive matrix 3	NM_021403|Srrm3|58212|serine/arginine repetitive matrix 3
mm9_v1_chr2_-_181433134_181433146	7.09327	FOXD3.p2	BC087873|4930526D03Rik|277496|RIKEN cDNA 4930526D03 gene	AK076877|4930526D03Rik|277496|RIKEN cDNA 4930526D03 gene	NM_199023|4930526D03Rik|277496|RIKEN cDNA 4930526D03 gene
mm9_v1_chr18_+_45428413_45428658	7.07836	FOXD3.p2	AK076494|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK033158|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr15_-_90509751_90509818	7.05783	FOXD3.p2	AK005311|Cpne8|66871|copine VIII	BC076564|Cpne8|66871|copine VIII	BC017626|Cpne8|66871|copine VIII	AK013407|Cpne8|66871|copine VIII	AK004559|Cpne8|66871|copine VIII	BC138745|Cpne8|66871|copine VIII	BC138746|Cpne8|66871|copine VIII	AK010227|Cpne8|66871|copine VIII	BC048551|Cpne8|66871|copine VIII	NM_001033851|Cpne8|66871|copine VIII	NM_025815|Cpne8|66871|copine VIII
mm9_v1_chr7_-_11751496_11751496	7.05588	FOXD3.p2	EF143406|Zscan4d|545913|zinc finger and SCAN domain containing 4D	NM_001100186|Zscan4d|545913|zinc finger and SCAN domain containing 4D
mm9_v1_chr4_+_134479542_134479573	7.05236	FOXD3.p2	BC002142|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC045256|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC051556|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC032060|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC043057|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AB041555|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK152736|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC054728|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr9_-_101101334_101101402	7.0496	FOXD3.p2	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr7_+_125856066_125856131	7.0164	FOXD3.p2	BC053103|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene	NM_182995|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene	AK141641|6330503K22Rik|101565|RIKEN cDNA 6330503K22 gene
mm9_v1_chr1_-_174128558_174128619	7.01086	FOXD3.p2	BC092079|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr7_-_77505248_77505478	7.00056	FOXD3.p2	X76653|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	U07635|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK140125|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	BC042484|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_009697|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr15_-_79656745_79656946	6.99736	FOXD3.p2	AK162544|Cbx6|494448|chromobox homolog 6	AK202886|Cbx6|494448|chromobox homolog 6	AK207037|Cbx6|494448|chromobox homolog 6	AK218930|Cbx6|494448|chromobox homolog 6
mm9_v1_chr10_+_127705052_127705052	6.99547	FOXD3.p2	NM_133997|Apof|103161|apolipoprotein F
mm9_v1_chr19_-_47044056_47044056	6.97393	FOXD3.p2	NM_001164365|Nt5c2|76952|5'-nucleotidase, cytosolic II
mm9_v1_chr2_-_122420914_122421005	6.9726	FOXD3.p2	AK167378|Gatm|67092|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
mm9_v1_chr12_+_37968225_37968446	6.95593	FOXD3.p2	AK040702|Tmem195|319660|transmembrane protein 195	NM_178767|Tmem195|319660|transmembrane protein 195	BC038044|Tmem195|319660|transmembrane protein 195	AK050246|Tmem195|319660|transmembrane protein 195	AK163155|Tmem195|319660|transmembrane protein 195
mm9_v1_chr13_+_9275741_9275783	6.9524	FOXD3.p2	NM_001081426|Dip2c|208440|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm9_v1_chr5_-_71233855_71233855	6.93911	FOXD3.p2	AK034332|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1	NM_010252|Gabrg1|14405|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
mm9_v1_chr18_+_37828606_37828758	6.92773	FOXD3.p2	AB093250|Pcdhga2|93710|protocadherin gamma subfamily A, 2	BC139178|Pcdhga2|93710|protocadherin gamma subfamily A, 2	AY013796|Pcdhga2|93710|protocadherin gamma subfamily A, 2	NM_033585|Pcdhga2|93710|protocadherin gamma subfamily A, 2
mm9_v1_chrX_+_20276404_20276539	6.92695	FOXD3.p2	AK177013|Cdk16|18555|cyclin-dependent kinase 16	AK212751|Cdk16|18555|cyclin-dependent kinase 16
mm9_v1_chr14_+_120696834_120696895	6.92174	FOXD3.p2	AK167479|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr9_-_96379093_96379128	6.91801	FOXD3.p2	AK006703|Rnf7|19823|ring finger protein 7
mm9_v1_chr2_+_169459145_169459258	6.91187	FOXD3.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr8_-_37631772_37631789	6.90405	FOXD3.p2	BC048730|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr7_-_137410321_137410321	6.90085	FOXD3.p2	NM_010207|Fgfr2|14183|fibroblast growth factor receptor 2	NM_201601|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr3_+_67868723_67868723	6.88472	FOXD3.p2	EU163407|Schip1|30953|schwannomin interacting protein 1	EU163408|Schip1|30953|schwannomin interacting protein 1	NM_001113420|Schip1|30953|schwannomin interacting protein 1	NM_001113421|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr18_-_67712374_67712430	6.88054	FOXD3.p2	BC058669|Spire1|68166|spire homolog 1 (Drosophila)	NM_194355|Spire1|68166|spire homolog 1 (Drosophila)	BC094375|Spire1|68166|spire homolog 1 (Drosophila)
mm9_v1_chr3_-_58999025_58999026	6.87575	FOXD3.p2	AK080394|Gpr87|84111|G protein-coupled receptor 87
mm9_v1_chr4_+_150227911_150228027	6.84693	FOXD3.p2	BC057646|Errfi1|74155|ERBB receptor feedback inhibitor 1
mm9_v1_chr6_+_145882641_145882808	6.81908	FOXD3.p2	AK162864|Sspn|16651|sarcospan	AK163041|Sspn|16651|sarcospan	AK164430|Sspn|16651|sarcospan	BC021484|Sspn|16651|sarcospan	NM_010656|Sspn|16651|sarcospan	U02487|Sspn|16651|sarcospan	AK148179|Sspn|16651|sarcospan	AK164529|Sspn|16651|sarcospan
mm9_v1_chr1_-_132586370_132586494	6.81794	FOXD3.p2	BC065379|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr18_+_37906739_37906841	6.81638	FOXD3.p2	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr16_+_43247396_43247452	6.81479	FOXD3.p2	AK005028|Zbtb20|56490|zinc finger and BTB domain containing 20	NM_019778|Zbtb20|56490|zinc finger and BTB domain containing 20	NM_181058|Zbtb20|56490|zinc finger and BTB domain containing 20	BC031114|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr13_+_48356795_48356817	6.79467	FOXD3.p2	NM_031166|Id4|15904|inhibitor of DNA binding 4	X75018|Id4|15904|inhibitor of DNA binding 4	BC145367|Id4|15904|inhibitor of DNA binding 4
mm9_v1_chr3_-_113277601_113277686	6.77678	FOXD3.p2	AK029642|Amy1|11722|amylase 1, salivary	NM_007446|Amy1|11722|amylase 1, salivary	V00719|Amy1|11722|amylase 1, salivary
mm9_v1_chr17_+_37138107_37138107	6.76204	FOXD3.p2	AK139625|Zfp57|22715|zinc finger protein 57	NM_001168502|Zfp57|22715|zinc finger protein 57
mm9_v1_chr12_+_110834872_110834878	6.73036	FOXD3.p2	AK038654|1110006E14Rik|76286|RIKEN cDNA 1110006E14 gene
mm9_v1_chr19_-_41970627_41970698	6.73024	FOXD3.p2	BC062977|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_199447|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	AK146550|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	BC056232|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm9_v1_chr10_+_126827366_126827366	6.72202	FOXD3.p2	NM_001168292|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr8_+_111482660_111482698	6.69577	FOXD3.p2	AK031741|Zfhx3|11906|zinc finger homeobox 3
mm9_v1_chr13_-_100286521_100286556	6.66305	FOXD3.p2	NM_008634|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr17_-_37160241_37160342	6.65828	FOXD3.p2	AK013504|Mog|17441|myelin oligodendrocyte glycoprotein	NM_010814|Mog|17441|myelin oligodendrocyte glycoprotein
mm9_v1_chr4_-_57314708_57314708	6.63259	FOXD3.p2	AK052928|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3	NM_011207|Ptpn3|545622|protein tyrosine phosphatase, non-receptor type 3
mm9_v1_chr15_-_36426538_36426542	6.63208	FOXD3.p2	AB076382|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr10_+_127936302_127936454	6.61367	FOXD3.p2	AK040027|A430046D13Rik|654440|Riken cDNA A430046D13 gene
mm9_v1_chr1_+_72353980_72354076	6.60346	FOXD3.p2	AK081633|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	NM_009533|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK089944|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK165470|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK084263|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC051660|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr11_+_28821585_28821724	6.60335	FOXD3.p2	AK162532|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr7_-_117509277_117509385	6.58631	FOXD3.p2	BC015069|Sbf2|319934|SET binding factor 2
mm9_v1_chr14_+_102239673_102239864	6.53534	FOXD3.p2	AK053129|Lmo7|380928|LIM domain only 7	AK143133|Lmo7|380928|LIM domain only 7	AK129231|Lmo7|380928|LIM domain only 7
mm9_v1_chr19_-_58529766_58529841	6.45812	FOXD3.p2	BC044783|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AK076171|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr9_-_52484889_52484906	6.45459	FOXD3.p2	AK053489|AI593442|330941|expressed sequence AI593442
mm9_v1_chr11_+_101902822_101902904	6.45276	FOXD3.p2	NM_001160711|Cd300lg|52685|CD300 antigen like family member G	NM_001160712|Cd300lg|52685|CD300 antigen like family member G	NM_001160713|Cd300lg|52685|CD300 antigen like family member G	NM_027987|Cd300lg|52685|CD300 antigen like family member G	AB243063|Cd300lg|52685|CD300 antigen like family member G	AB243064|Cd300lg|52685|CD300 antigen like family member G	AB243065|Cd300lg|52685|CD300 antigen like family member G	AB243066|Cd300lg|52685|CD300 antigen like family member G	AK009375|Cd300lg|52685|CD300 antigen like family member G	BC116906|Cd300lg|52685|CD300 antigen like family member G	BC119315|Cd300lg|52685|CD300 antigen like family member G	AK171982|Cd300lg|52685|CD300 antigen like family member G	AK138920|Cd300lg|52685|CD300 antigen like family member G	AY457055|Cd300lg|52685|CD300 antigen like family member G
mm9_v1_chr13_-_23712946_23712992	6.43577	FOXD3.p2	AK049948|Hist1h2be|319179|histone cluster 1, H2be	NM_001177653|Hist1h2be|319179|histone cluster 1, H2be	AK030546|Hist1h2be|319179|histone cluster 1, H2be	NM_178194|Hist1h2be|319179|histone cluster 1, H2be
mm9_v1_chr8_-_74195650_74195661	6.40878	FOXD3.p2	NM_001029873|Unc13a|382018|unc-13 homolog A (C. elegans)	AK035920|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr7_+_31076771_31076772	6.385	FOXD3.p2	NM_001081114|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr7_-_52230117_52230178	6.37508	FOXD3.p2	AF320000|Cpt1c|78070|carnitine palmitoyltransferase 1c	NM_153679|Cpt1c|78070|carnitine palmitoyltransferase 1c	BC066155|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr3_+_84668066_84668066	6.34728	FOXD3.p2	BC066093|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177774|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr7_+_31076852_31076943	6.34067	FOXD3.p2	BC138413|Clip3|76686|CAP-GLY domain containing linker protein 3
mm9_v1_chr2_+_121692687_121692705	6.32426	FOXD3.p2	BC064446|Casc4|319996|cancer susceptibility candidate 4	NM_177054|Casc4|319996|cancer susceptibility candidate 4	NM_199038|Casc4|319996|cancer susceptibility candidate 4
mm9_v1_chr10_+_75398317_75398317	6.3152	FOXD3.p2	AY238604|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10	NM_175329|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10
mm9_v1_chr14_-_104213981_104213985	6.30125	FOXD3.p2	
mm9_v1_chr19_-_10944196_10944284	6.29914	FOXD3.p2	BC006896|Tmem132a|98170|transmembrane protein 132A	AK173207|Tmem132a|98170|transmembrane protein 132A	AK036651|Tmem132a|98170|transmembrane protein 132A	AK032956|Tmem132a|98170|transmembrane protein 132A	AK048556|Tmem132a|98170|transmembrane protein 132A	AK164646|Tmem132a|98170|transmembrane protein 132A	NM_133804|Tmem132a|98170|transmembrane protein 132A
mm9_v1_chr7_-_31411089_31411143	6.29062	FOXD3.p2	AK018721|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	BC024343|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	AK012686|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1
mm9_v1_chrX_-_9793824_9794045	6.27553	FOXD3.p2	AJ238396|Rpgr|19893|retinitis pigmentosa GTPase regulator	AF044677|Rpgr|19893|retinitis pigmentosa GTPase regulator	BC012661|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK136298|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK017192|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK081631|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK038652|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177950|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177951|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177953|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177954|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_011285|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK029864|Rpgr|19893|retinitis pigmentosa GTPase regulator
mm9_v1_chr11_+_60268108_60268134	6.27164	FOXD3.p2	AJ243590|Drg2|13495|developmentally regulated GTP binding protein 2	NM_021354|Drg2|13495|developmentally regulated GTP binding protein 2
mm9_v1_chr2_-_168559743_168559783	6.27015	FOXD3.p2	AK089064|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chr11_-_109856977_109857129	6.2663	FOXD3.p2	BC089557|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK173034|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	BC141401|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AF498362|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK138196|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	NM_013851|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b
mm9_v1_chr3_+_134944239_134944255	6.26469	FOXD3.p2	BC036998|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr9_+_43875175_43875249	6.24483	FOXD3.p2	AY255638|Usp2|53376|ubiquitin specific peptidase 2	AY255639|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr7_-_107806887_107806989	6.22393	FOXD3.p2	AK005102|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AK164683|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AK158172|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163183|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163184|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163185|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr13_+_40955500_40955723	6.20057	FOXD3.p2	AK077598|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_023887|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK156328|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435148|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr9_+_82723787_82723813	6.16094	FOXD3.p2	AJ242722|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr5_-_108304062_108304125	6.14452	FOXD3.p2	AK165332|Evi5|14020|ecotropic viral integration site 5	BC030056|Evi5|14020|ecotropic viral integration site 5	NM_007964|Evi5|14020|ecotropic viral integration site 5	U53586|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr7_-_25084567_25084655	6.1161	FOXD3.p2	NM_009561|Zfp61|22719|zinc finger protein 61	BC006618|Zfp61|22719|zinc finger protein 61
mm9_v1_chr6_+_129483215_129483234	6.11285	FOXD3.p2	AK011975|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK159015|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK167500|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr8_+_87162885_87162891	6.10542	FOXD3.p2	AK132071|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr9_+_82723591_82723695	6.08113	FOXD3.p2	AK076594|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK013036|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK045436|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC046301|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC061099|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AF093135|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK014712|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK020448|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr6_-_23082901_23082994	6.07792	FOXD3.p2	AK149400|Aass|30956|aminoadipate-semialdehyde synthase	AK098141|Aass|30956|aminoadipate-semialdehyde synthase	AK136216|Aass|30956|aminoadipate-semialdehyde synthase	BC005420|Aass|30956|aminoadipate-semialdehyde synthase	AK044323|Aass|30956|aminoadipate-semialdehyde synthase	NM_013930|Aass|30956|aminoadipate-semialdehyde synthase
mm9_v1_chr5_-_42235518_42235530	6.06042	FOXD3.p2	AK046296|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK053690|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK134590|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr6_+_96063137_96063148	6.05243	FOXD3.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr15_+_12808445_12808493	6.04564	FOXD3.p2	BC040801|Drosha|14000|drosha, ribonuclease type III
mm9_v1_chr6_-_124586102_124586102	6.02224	FOXD3.p2	AF459020|Gm5077|317677|predicted gene 5077	NM_173864|Gm5077|317677|predicted gene 5077
mm9_v1_chr3_+_133902563_133902608	6.02023	FOXD3.p2	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr4_+_155177707_155177763	6.00991	FOXD3.p2	AK011341|Mrpl20|66448|mitochondrial ribosomal protein L20	NM_025570|Mrpl20|66448|mitochondrial ribosomal protein L20	AK004053|Mrpl20|66448|mitochondrial ribosomal protein L20	AB049645|Mrpl20|66448|mitochondrial ribosomal protein L20	AK168665|Mrpl20|66448|mitochondrial ribosomal protein L20	BC039985|Mrpl20|66448|mitochondrial ribosomal protein L20	AK015199|Mrpl20|66448|mitochondrial ribosomal protein L20
mm9_v1_chr1_-_45559700_45559773	6.00985	FOXD3.p2	AK139130|Col5a2|12832|collagen, type V, alpha 2	AK160008|Col5a2|12832|collagen, type V, alpha 2	L02918|Col5a2|12832|collagen, type V, alpha 2	AK084803|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr6_-_92517359_92517359	5.99941	FOXD3.p2	BC050793|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134461|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chrX_-_73119876_73119897	5.98482	FOXD3.p2	BC005459|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr3_-_81779636_81779675	5.98328	FOXD3.p2	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr13_+_109444370_109444370	5.96212	FOXD3.p2	AF536978|Pde4d|238871|phosphodiesterase 4D, cAMP specific	NM_011056|Pde4d|238871|phosphodiesterase 4D, cAMP specific
mm9_v1_chr4_-_134108044_134108129	5.96139	FOXD3.p2	NM_029100|Sepn1|74777|selenoprotein N, 1
mm9_v1_chr2_+_72244049_72244137	5.94502	FOXD3.p2	AK137519|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene
mm9_v1_chrX_-_130432840_130432967	5.94116	FOXD3.p2	AK160313|Tspan6|56496|tetraspanin 6	AK167384|Tspan6|56496|tetraspanin 6	AK146673|Tspan6|56496|tetraspanin 6	AK149204|Tspan6|56496|tetraspanin 6	BC110314|Tspan6|56496|tetraspanin 6	BC003733|Tspan6|56496|tetraspanin 6	NM_019656|Tspan6|56496|tetraspanin 6
mm9_v1_chr1_-_39708086_39708119	5.93183	FOXD3.p2	AK134861|Creg2|263764|cellular repressor of E1A-stimulated genes 2
mm9_v1_chr8_+_96334879_96334940	5.92461	FOXD3.p2	BC051989|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr16_+_36828464_36828529	5.92421	FOXD3.p2	NM_177128|Iqcb1|320299|IQ calmodulin-binding motif containing 1	BC029084|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK078554|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK165220|Iqcb1|320299|IQ calmodulin-binding motif containing 1
mm9_v1_chr2_+_71892681_71892690	5.91994	FOXD3.p2	AB445011|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chrX_-_47988434_47988499	5.91659	FOXD3.p2	AK030946|6720401G13Rik|103012|RIKEN cDNA 6720401G13 gene
mm9_v1_chr1_-_194677940_194677940	5.90459	FOXD3.p2	NM_001177794|Sertad4|214791|SERTA domain containing 4
mm9_v1_chr4_-_82151180_82151288	5.89912	FOXD3.p2	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr10_+_90038471_90038471	5.89456	FOXD3.p2	BC098373|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B	NM_001177397|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr2_+_132607013_132607168	5.8745	FOXD3.p2	AK158857|Chgb|12653|chromogranin B	NM_007694|Chgb|12653|chromogranin B
mm9_v1_chr2_+_163428073_163428114	5.84163	FOXD3.p2	AK043791|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK052794|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK018052|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK156641|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK081680|Ttpal|76080|tocopherol (alpha) transfer protein-like	BC052389|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK033600|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr4_-_82150687_82150887	5.83386	FOXD3.p2	AY035852|Nfib|18028|nuclear factor I/B	AY035853|Nfib|18028|nuclear factor I/B	BC014290|Nfib|18028|nuclear factor I/B	BC023366|Nfib|18028|nuclear factor I/B	U57634|Nfib|18028|nuclear factor I/B
mm9_v1_chr6_+_122824491_122824588	5.80545	FOXD3.p2	BC119133|Necap1|67602|NECAP endocytosis associated 1	BC120841|Necap1|67602|NECAP endocytosis associated 1	AK004805|Necap1|67602|NECAP endocytosis associated 1	AK081598|Necap1|67602|NECAP endocytosis associated 1	AK168500|Necap1|67602|NECAP endocytosis associated 1	NM_026267|Necap1|67602|NECAP endocytosis associated 1	BC011466|Necap1|67602|NECAP endocytosis associated 1	AK005263|Necap1|67602|NECAP endocytosis associated 1	BC098227|Necap1|67602|NECAP endocytosis associated 1	AK220236|Necap1|67602|NECAP endocytosis associated 1
mm9_v1_chr14_-_55735114_55735220	5.80232	FOXD3.p2	AB099712|Jph4|319984|junctophilin 4	NM_177049|Jph4|319984|junctophilin 4
mm9_v1_chr19_-_10137491_10137508	5.7999	FOXD3.p2	
mm9_v1_chr4_-_91066674_91066674	5.78753	FOXD3.p2	BC049125|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	BC058393|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_207685|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr8_-_48437701_48437701	5.78596	FOXD3.p2	BC100572|Stox2|71069|storkhead box 2	BC100573|Stox2|71069|storkhead box 2	NM_175162|Stox2|71069|storkhead box 2
mm9_v1_chr18_+_36526187_36526274	5.78113	FOXD3.p2	AK003470|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene
mm9_v1_chr10_-_116782524_116782604	5.76527	FOXD3.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr10_+_56097078_56097350	5.75804	FOXD3.p2	AY427554|Gja1|14609|gap junction protein, alpha 1	AY427555|Gja1|14609|gap junction protein, alpha 1	NM_010288|Gja1|14609|gap junction protein, alpha 1	M63801|Gja1|14609|gap junction protein, alpha 1	AK011459|Gja1|14609|gap junction protein, alpha 1	AK036979|Gja1|14609|gap junction protein, alpha 1	AK145692|Gja1|14609|gap junction protein, alpha 1	AK161997|Gja1|14609|gap junction protein, alpha 1	AK171955|Gja1|14609|gap junction protein, alpha 1	AY427560|Gja1|14609|gap junction protein, alpha 1	BC006894|Gja1|14609|gap junction protein, alpha 1	BC055375|Gja1|14609|gap junction protein, alpha 1	AK029291|Gja1|14609|gap junction protein, alpha 1	AK165986|Gja1|14609|gap junction protein, alpha 1	X61576|Gja1|14609|gap junction protein, alpha 1	AY427556|Gja1|14609|gap junction protein, alpha 1	AY427557|Gja1|14609|gap junction protein, alpha 1	AY427558|Gja1|14609|gap junction protein, alpha 1
mm9_v1_chr10_-_126959397_126959444	5.74561	FOXD3.p2	BC051396|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK012355|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK169192|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr2_-_121299743_121299792	5.74519	FOXD3.p2	AK011317|Mfap1b|100034361|microfibrillar-associated protein 1B	AK018514|Mfap1b|100034361|microfibrillar-associated protein 1B	NM_001081975|Mfap1b|100034361|microfibrillar-associated protein 1B	AK169029|Mfap1b|100034361|microfibrillar-associated protein 1B	AK088946|Mfap1b|100034361|microfibrillar-associated protein 1B
mm9_v1_chr6_+_39542563_39542611	5.72854	FOXD3.p2	AK028334|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK010642|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK019008|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	NM_026612|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	BC013510|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	AK007495|Ndufb2|68198|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2
mm9_v1_chr15_-_36426543_36426556	5.72214	FOXD3.p2	BC035553|Ankrd46|68839|ankyrin repeat domain 46	NM_175134|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr12_+_89961317_89961336	5.71462	FOXD3.p2	AK078216|Nrxn3|18191|neurexin III	AK082055|Nrxn3|18191|neurexin III	NM_001198587|Nrxn3|18191|neurexin III	AK149250|Nrxn3|18191|neurexin III
mm9_v1_chr5_-_115636064_115636129	5.70665	FOXD3.p2	AB079604|Cabp1|29867|calcium binding protein 1	AF169152|Cabp1|29867|calcium binding protein 1	AF169153|Cabp1|29867|calcium binding protein 1	NM_013879|Cabp1|29867|calcium binding protein 1
mm9_v1_chr9_+_43875103_43875168	5.70319	FOXD3.p2	NM_198092|Usp2|53376|ubiquitin specific peptidase 2	AK138799|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr7_-_129245303_129245368	5.6886	FOXD3.p2	AK167447|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK089103|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC092379|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC060951|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018717|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK008788|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK009698|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK010307|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK011302|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018688|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK151719|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK152995|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	NM_028177|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm9_v1_chr2_+_163843294_163843512	5.67807	FOXD3.p2	AK206846|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK207996|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK212148|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK214843|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK215126|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK219468|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr1_+_72354084_72354123	5.67807	FOXD3.p2	X66323|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AF166486|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK010416|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK167312|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK168913|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK169838|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC029218|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr5_+_89012596_89012599	5.67136	FOXD3.p2	BC049127|Rufy3|52822|RUN and FYVE domain containing 3	NM_027530|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr1_-_58558259_58558259	5.66976	FOXD3.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr1_+_51345952_51345993	5.66085	FOXD3.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr8_+_86939262_86939275	5.66075	FOXD3.p2	AK147288|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_007578|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147277|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147498|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147697|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr12_-_13255934_13256032	5.65292	FOXD3.p2	BC008570|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK166146|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK028341|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK053259|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK160982|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	BC010624|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	NM_134040|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK153335|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK132157|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
mm9_v1_chrX_-_40627962_40627962	5.65279	FOXD3.p2	AB025410|Odz1|23963|odd Oz/ten-m homolog 1 (Drosophila)	NM_011855|Odz1|23963|odd Oz/ten-m homolog 1 (Drosophila)
mm9_v1_chr5_+_89012537_89012542	5.6365	FOXD3.p2	AK013185|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr11_-_103733519_103733644	5.62764	FOXD3.p2	AK214505|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK208793|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK203353|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK213251|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK028415|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr12_+_32008372_32008419	5.62381	FOXD3.p2	AK141833|Lamb1|16777|laminin B1
mm9_v1_chr1_-_166368439_166368560	5.61906	FOXD3.p2	EF437334|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr1_-_164796660_164796743	5.60418	FOXD3.p2	BC011229|Fmo1|14261|flavin containing monooxygenase 1	NM_010231|Fmo1|14261|flavin containing monooxygenase 1
mm9_v1_chrX_-_108651553_108651553	5.6035	FOXD3.p2	NM_025949|Rps6ka6|67071|ribosomal protein S6 kinase polypeptide 6
mm9_v1_chr7_-_6683113_6683136	5.58599	FOXD3.p2	BC085183|Peg3|18616|paternally expressed 3	BC072661|Peg3|18616|paternally expressed 3	AB003040|Peg3|18616|paternally expressed 3	AK044602|Peg3|18616|paternally expressed 3	AK053523|Peg3|18616|paternally expressed 3	AK141217|Peg3|18616|paternally expressed 3	NM_008817|Peg3|18616|paternally expressed 3	AK163845|Peg3|18616|paternally expressed 3
mm9_v1_chr9_-_117539030_117539030	5.56275	FOXD3.p2	AK046197|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172121|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr5_-_44485951_44486006	5.54418	FOXD3.p2	AF305215|Prom1|19126|prominin 1	AY099088|Prom1|19126|prominin 1	AY223521|Prom1|19126|prominin 1	AY223522|Prom1|19126|prominin 1	NM_001163578|Prom1|19126|prominin 1	NM_001163581|Prom1|19126|prominin 1	NM_001163582|Prom1|19126|prominin 1	NM_001163583|Prom1|19126|prominin 1	NM_001163584|Prom1|19126|prominin 1	NM_001163585|Prom1|19126|prominin 1
mm9_v1_chr7_+_27904997_27905027	5.53458	FOXD3.p2	BC011089|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2	BC024742|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr7_+_80885175_80885216	5.5293	FOXD3.p2	NM_001162532|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr10_-_80522871_80522963	5.5243	FOXD3.p2	AK039966|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	BC003836|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	NM_024499|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK051005|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK079168|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK165557|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm9_v1_chr5_+_89012547_89012592	5.50535	FOXD3.p2	AK018184|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr15_-_96861590_96861647	5.49255	FOXD3.p2	BC024072|Slc38a4|69354|solute carrier family 38, member 4	BC024123|Slc38a4|69354|solute carrier family 38, member 4	AB055004|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr4_+_55093796_55093934	5.48998	FOXD3.p2	AK035041|Zfp462|242466|zinc finger protein 462
mm9_v1_chr1_-_75250520_75250549	5.48409	FOXD3.p2	BC064020|Ptprn|19275|protein tyrosine phosphatase, receptor type, N
mm9_v1_chr18_+_67293403_67293479	5.48079	FOXD3.p2	AK032407|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	AY179169|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	NM_010307|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm9_v1_chr7_+_27904981_27904993	5.47042	FOXD3.p2	M77497|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chrX_+_132277282_132277299	5.4572	FOXD3.p2	BC070413|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	AK008944|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	BC085157|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1
mm9_v1_chr16_+_72663393_72663448	5.44443	FOXD3.p2	AK138485|Robo1|19876|roundabout homolog 1 (Drosophila)	AK143001|Robo1|19876|roundabout homolog 1 (Drosophila)	NM_019413|Robo1|19876|roundabout homolog 1 (Drosophila)	AK032752|Robo1|19876|roundabout homolog 1 (Drosophila)	AK142047|Robo1|19876|roundabout homolog 1 (Drosophila)
mm9_v1_chr19_-_38199737_38199810	5.42556	FOXD3.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr9_-_44728786_44728789	5.42545	FOXD3.p2	AK008012|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008030|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008183|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008251|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009465|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009468|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009471|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009806|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019192|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019252|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019274|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019350|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019355|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr1_-_55283618_55283625	5.42093	FOXD3.p2	AK012229|Rftn2|74013|raftlin family member 2	AK031158|Rftn2|74013|raftlin family member 2	BC038341|Rftn2|74013|raftlin family member 2	NM_028713|Rftn2|74013|raftlin family member 2
mm9_v1_chr8_-_42300504_42300520	5.42031	FOXD3.p2	AF478470|Fgl1|234199|fibrinogen-like protein 1	AK083397|Fgl1|234199|fibrinogen-like protein 1	NM_145594|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr6_-_21802514_21802514	5.40084	FOXD3.p2	AK050737|Tspan12|269831|tetraspanin 12	NM_173007|Tspan12|269831|tetraspanin 12
mm9_v1_chr7_-_140974399_140974445	5.38792	FOXD3.p2	AK028910|Dhx32|101437|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm9_v1_chr7_-_140179678_140180024	5.38446	FOXD3.p2	AK187460|Ctbp2|13017|C-terminal binding protein 2	AK161077|Ctbp2|13017|C-terminal binding protein 2	AK198744|Ctbp2|13017|C-terminal binding protein 2	AK199198|Ctbp2|13017|C-terminal binding protein 2	AK201071|Ctbp2|13017|C-terminal binding protein 2	AK217772|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr7_+_24919177_24919260	5.37478	FOXD3.p2	NM_019941|Zfp235|56525|zinc finger protein 235	AK045726|Zfp235|56525|zinc finger protein 235	AK002713|Zfp235|56525|zinc finger protein 235	AK147833|Zfp235|56525|zinc finger protein 235	AF167321|Zfp235|56525|zinc finger protein 235	AK139127|Zfp235|56525|zinc finger protein 235	BC099965|Zfp235|56525|zinc finger protein 235
mm9_v1_chr10_-_80993364_80993465	5.36826	FOXD3.p2	AK088773|Gna11|14672|guanine nucleotide binding protein, alpha 11
mm9_v1_chr4_+_13711928_13711928	5.36758	FOXD3.p2	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr8_+_109127245_109127278	5.35354	FOXD3.p2	AK076369|Cdh1|12550|cadherin 1	AK166267|Cdh1|12550|cadherin 1	NM_009864|Cdh1|12550|cadherin 1	BC098501|Cdh1|12550|cadherin 1
mm9_v1_chr8_-_42300477_42300498	5.34261	FOXD3.p2	BC021946|Fgl1|234199|fibrinogen-like protein 1	BC029734|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chr11_-_62190182_62190262	5.34224	FOXD3.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr3_+_107895985_107896200	5.32076	FOXD3.p2	BC016272|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	NM_008141|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131941|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC131943|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	BC085102|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	L10666|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2	AK009388|Gnat2|14686|guanine nucleotide binding protein, alpha transducing 2
mm9_v1_chr10_+_98453513_98453709	5.31864	FOXD3.p2	AK053569|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK042547|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr6_-_128531620_128531628	5.31512	FOXD3.p2	AK138836|BC048546|232400|cDNA sequence BC048546	NM_001001179|BC048546|232400|cDNA sequence BC048546	AK161184|BC048546|232400|cDNA sequence BC048546
mm9_v1_chr13_+_13274982_13275048	5.31419	FOXD3.p2	AK145824|Prl2c5|107849|prolactin family 2, subfamily c, member 5	BC132514|Prl2c5|107849|prolactin family 2, subfamily c, member 5	BC132516|Prl2c5|107849|prolactin family 2, subfamily c, member 5	AF128884|Prl2c5|107849|prolactin family 2, subfamily c, member 5	NM_181852|Prl2c5|107849|prolactin family 2, subfamily c, member 5
mm9_v1_chr12_-_86311718_86311851	5.28605	FOXD3.p2	BC057351|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	BC079590|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147878|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK154529|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147491|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	NM_178065|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene
mm9_v1_chr2_+_143371807_143372226	5.28079	FOXD3.p2	AK158598|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK133620|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	NM_008792|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC057348|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK158493|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK161585|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC052013|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK039783|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	M55669|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483512|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483513|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2
mm9_v1_chr1_-_175912844_175912974	5.26229	FOXD3.p2	AF140672|Ifi202b|26388|interferon activated gene 202B	NM_008327|Ifi202b|26388|interferon activated gene 202B	NM_011940|Ifi202b|26388|interferon activated gene 202B
mm9_v1_chr4_-_107743887_107743940	5.26029	FOXD3.p2	AK002425|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr18_+_37179802_37179999	5.25249	FOXD3.p2	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chr10_+_115254308_115254566	5.24915	FOXD3.p2	AK087696|Tspan8|216350|tetraspanin 8	AK077301|Tspan8|216350|tetraspanin 8	BC027777|Tspan8|216350|tetraspanin 8	BC029808|Tspan8|216350|tetraspanin 8	NM_001168679|Tspan8|216350|tetraspanin 8	NM_001168680|Tspan8|216350|tetraspanin 8	NM_146010|Tspan8|216350|tetraspanin 8	BC029068|Tspan8|216350|tetraspanin 8	BC025461|Tspan8|216350|tetraspanin 8	BC034198|Tspan8|216350|tetraspanin 8
mm9_v1_chr14_+_27473359_27473404	5.23795	FOXD3.p2	AK206427|Arf4|11843|ADP-ribosylation factor 4	AK210624|Arf4|11843|ADP-ribosylation factor 4
mm9_v1_chr13_-_104533638_104533655	5.22517	FOXD3.p2	
mm9_v1_chr6_-_144997243_144997294	5.22458	FOXD3.p2	AK138468|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK013888|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr12_+_110798661_110798666	5.22071	FOXD3.p2	AK019916|Meg3|17263|maternally expressed 3
mm9_v1_chr12_+_83412335_83412335	5.22022	FOXD3.p2	NM_172579|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1
mm9_v1_chr9_-_64062342_64062398	5.20589	FOXD3.p2	AK165664|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr16_+_5884885_5884885	5.20506	FOXD3.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr13_+_33119282_33119422	5.18369	FOXD3.p2	AK005491|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	NM_011452|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	U96705|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK167563|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK171850|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	BC064768|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b
mm9_v1_chr4_+_128820458_128820467	5.16962	FOXD3.p2	AK137327|Fndc5|384061|fibronectin type III domain containing 5
mm9_v1_chr14_-_37690597_37690679	5.16326	FOXD3.p2	AK084686|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr5_+_34185760_34185844	5.157	FOXD3.p2	NM_001081102|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_001177884|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	NM_175231|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)	BC079668|Whsc1|107823|Wolf-Hirschhorn syndrome candidate 1 (human)
mm9_v1_chr17_-_46155601_46155620	5.15345	FOXD3.p2	AK031905|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr1_-_94348610_94348663	5.11392	FOXD3.p2	AK203226|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
mm9_v1_chr17_-_24769539_24769566	5.10392	FOXD3.p2	AK147487|Tsc2|22084|tuberous sclerosis 2	AK171007|Tsc2|22084|tuberous sclerosis 2	U39818|Tsc2|22084|tuberous sclerosis 2	AK147016|Tsc2|22084|tuberous sclerosis 2	BC052449|Tsc2|22084|tuberous sclerosis 2	BC060701|Tsc2|22084|tuberous sclerosis 2	AK190188|Tsc2|22084|tuberous sclerosis 2	AK170589|Tsc2|22084|tuberous sclerosis 2	AK148062|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr15_+_10106992_10106998	5.08187	FOXD3.p2	AK054551|Prlr|19116|prolactin receptor	NM_011169|Prlr|19116|prolactin receptor	AK042147|Prlr|19116|prolactin receptor
mm9_v1_chr7_-_20189709_20189838	5.07262	FOXD3.p2	AF042799|Clasrp|53609|CLK4-associating serine/arginine rich protein	AK009334|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC010728|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC079543|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC103781|Clasrp|53609|CLK4-associating serine/arginine rich protein	AK159443|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC106129|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC060092|Clasrp|53609|CLK4-associating serine/arginine rich protein	BC051916|Clasrp|53609|CLK4-associating serine/arginine rich protein	NM_016680|Clasrp|53609|CLK4-associating serine/arginine rich protein
mm9_v1_chr2_-_73749317_73749415	5.05259	FOXD3.p2	AK077930|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	NM_175015|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	AK087955|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)
mm9_v1_chr18_+_37644390_37644448	5.05064	FOXD3.p2	AK122533|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chr7_+_29052821_29052973	5.04819	FOXD3.p2	BC094513|Eid2|386655|EP300 interacting inhibitor of differentiation 2	NM_198425|Eid2|386655|EP300 interacting inhibitor of differentiation 2	AY251273|Eid2|386655|EP300 interacting inhibitor of differentiation 2
mm9_v1_chr2_+_72018059_72018093	5.04642	FOXD3.p2	AK004874|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr7_+_111367306_111367377	5.02332	FOXD3.p2	AK040000|Trim6|94088|tripartite motif-containing 6	NM_001013616|Trim6|94088|tripartite motif-containing 6	AK021253|Trim6|94088|tripartite motif-containing 6	AK033396|Trim6|94088|tripartite motif-containing 6	AK049238|Trim6|94088|tripartite motif-containing 6	BC138965|Trim6|94088|tripartite motif-containing 6
mm9_v1_chr16_-_42340613_42340763	5.02296	FOXD3.p2	AK031908|Gap43|14432|growth associated protein 43	BC080758|Gap43|14432|growth associated protein 43	BC028288|Gap43|14432|growth associated protein 43	NM_008083|Gap43|14432|growth associated protein 43
mm9_v1_chr12_+_71008808_71008844	5.0198	FOXD3.p2	AK140185|Atl1|73991|atlastin GTPase 1	AK046919|Atl1|73991|atlastin GTPase 1	BC050784|Atl1|73991|atlastin GTPase 1
mm9_v1_chr7_+_80885223_80885308	5.01611	FOXD3.p2	BC034069|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr4_-_96220030_96220248	5.00515	FOXD3.p2	AK180579|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK186838|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK193212|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK210777|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK078893|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK165663|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK038636|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6
mm9_v1_chr12_-_73337707_73337756	4.98943	FOXD3.p2	AK002997|Rtn1|104001|reticulon 1	NM_001007596|Rtn1|104001|reticulon 1
mm9_v1_chr11_+_119862650_119862652	4.97961	FOXD3.p2	AK083201|Baiap2|108100|brain-specific angiogenesis inhibitor 1-associated protein 2
mm9_v1_chr6_+_129483154_129483185	4.96995	FOXD3.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr6_+_115803545_115803666	4.9492	FOXD3.p2	NM_001167763|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	NM_031177|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK044456|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167330|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167412|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC060621|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK131115|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC066083|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC067415|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK031308|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)
mm9_v1_chr7_+_30023368_30023534	4.94884	FOXD3.p2	AK020444|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chr3_+_68376319_68376428	4.93015	FOXD3.p2	BC060529|Schip1|30953|schwannomin interacting protein 1	AK021361|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr3_-_146432922_146432972	4.89804	FOXD3.p2	AK139419|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr7_+_30023324_30023364	4.8928	FOXD3.p2	NM_001110201|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	NM_029887|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	BC109331|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)	AK135529|Yif1b|77254|Yip1 interacting factor homolog B (S. cerevisiae)
mm9_v1_chrX_+_135744582_135744582	4.88839	FOXD3.p2	NM_001164630|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_175541|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr16_+_17331507_17331521	4.88688	FOXD3.p2	BC089610|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr17_-_29052264_29052268	4.83459	FOXD3.p2	BC117930|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene	AK033585|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene	NM_172450|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene
mm9_v1_chr19_-_5349326_5349384	4.83451	FOXD3.p2	BC027680|Cst6|73720|cystatin E/M	BC061036|Cst6|73720|cystatin E/M	AK003744|Cst6|73720|cystatin E/M
mm9_v1_chr6_-_71773747_71773805	4.81664	FOXD3.p2	AK039187|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010369|Mrpl35|66223|mitochondrial ribosomal protein L35	AK012807|Mrpl35|66223|mitochondrial ribosomal protein L35	AK004385|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010223|Mrpl35|66223|mitochondrial ribosomal protein L35	BC028750|Mrpl35|66223|mitochondrial ribosomal protein L35	NM_025430|Mrpl35|66223|mitochondrial ribosomal protein L35
mm9_v1_chrX_+_131252542_131252558	4.81551	FOXD3.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr7_-_67285104_67285104	4.81284	FOXD3.p2	NM_001082962|Snrpn|20646|small nuclear ribonucleoprotein N
mm9_v1_chr18_+_37127284_37127409	4.81188	FOXD3.p2	D86917|Pcdha6|12937|protocadherin alpha 6	BC150815|Pcdha6|12937|protocadherin alpha 6	BC150816|Pcdha6|12937|protocadherin alpha 6	BC054813|Pcdha6|12937|protocadherin alpha 6	AY013764|Pcdha6|12937|protocadherin alpha 6	NM_007767|Pcdha6|12937|protocadherin alpha 6
mm9_v1_chr9_+_110146286_110146286	4.80837	FOXD3.p2	AF461090|Cspg5|29873|chondroitin sulfate proteoglycan 5	AF461092|Cspg5|29873|chondroitin sulfate proteoglycan 5	NM_001166273|Cspg5|29873|chondroitin sulfate proteoglycan 5	NM_013884|Cspg5|29873|chondroitin sulfate proteoglycan 5
mm9_v1_chr19_+_46227039_46227050	4.80608	FOXD3.p2	BC076569|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	NM_178930|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr1_-_191167231_191167231	4.80379	FOXD3.p2	NM_001159850|Kcnk2|16526|potassium channel, subfamily K, member 2
mm9_v1_chr16_+_17489743_17489783	4.79977	FOXD3.p2	BC046517|Aifm3|72168|apoptosis-inducing factor, mitochondrion-associated 3	NM_175178|Aifm3|72168|apoptosis-inducing factor, mitochondrion-associated 3
mm9_v1_chr2_+_172825609_172825642	4.79468	FOXD3.p2	BC060072|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK079383|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	NM_175112|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr4_-_75779379_75779379	4.79263	FOXD3.p2	AF326559|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AF326560|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_001014288|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr16_+_96689373_96689378	4.78139	FOXD3.p2	X17320|Pcp4|18546|Purkinje cell protein 4
mm9_v1_chr4_-_116312569_116312608	4.76875	FOXD3.p2	AK216201|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK200998|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK184360|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK187660|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK189553|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK196298|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr6_-_38238095_38238171	4.76648	FOXD3.p2	AK045178|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr10_+_28863801_28863929	4.76508	FOXD3.p2	NM_026138|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene	AK030682|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene
mm9_v1_chr10_+_90292453_90292587	4.75903	FOXD3.p2	AK038609|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chrX_-_34650263_34650340	4.75821	FOXD3.p2	AK019989|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC058761|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK162222|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK011606|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK145431|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	NM_026573|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117769|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117770|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm9_v1_chr8_-_96622268_96622369	4.75616	FOXD3.p2	AK010779|Bbs2|67378|Bardet-Biedl syndrome 2 (human)	BC057184|Bbs2|67378|Bardet-Biedl syndrome 2 (human)
mm9_v1_chr2_-_109118405_109118446	4.74894	FOXD3.p2	BC115926|Mett5d1|76894|methyltransferase 5 domain containing 1	BC117549|Mett5d1|76894|methyltransferase 5 domain containing 1	BC106186|Mett5d1|76894|methyltransferase 5 domain containing 1	BC089533|Mett5d1|76894|methyltransferase 5 domain containing 1	AK002682|Mett5d1|76894|methyltransferase 5 domain containing 1	NM_029790|Mett5d1|76894|methyltransferase 5 domain containing 1
mm9_v1_chr4_-_143998305_143998366	4.7448	FOXD3.p2	AK167683|Pramef12|77632|PRAME family member 12	BC066168|Pramef12|77632|PRAME family member 12	AK019795|Pramef12|77632|PRAME family member 12	NM_029948|Pramef12|77632|PRAME family member 12
mm9_v1_chr7_+_11983263_11983263	4.74366	FOXD3.p2	AK141250|Zscan4f|665902|zinc finger and SCAN domain containing 4F	NM_001110316|Zscan4f|665902|zinc finger and SCAN domain containing 4F
mm9_v1_chr4_-_86876328_86876443	4.72351	FOXD3.p2	AK038800|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK136058|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_172426|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr13_-_60278859_60278952	4.71702	FOXD3.p2	NM_008086|Gas1|14451|growth arrest specific 1
mm9_v1_chr4_-_60889249_60889317	4.71625	FOXD3.p2	BC091775|Mup1|17840|major urinary protein 1	AK013259|Mup19|100189605|major urinary protein 19	NM_001134674|Mup13|100039089|major urinary protein 13
mm9_v1_chr5_-_137462712_137462731	4.70209	FOXD3.p2	BC026751|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr9_+_113721698_113721717	4.6954	FOXD3.p2	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chr2_+_35516774_35517011	4.69441	FOXD3.p2	AY305656|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr16_+_17489703_17489734	4.66867	FOXD3.p2	AK158809|Aifm3|72168|apoptosis-inducing factor, mitochondrion-associated 3
mm9_v1_chr5_+_135526788_135526925	4.65772	FOXD3.p2	
mm9_v1_chr13_-_98976043_98976393	4.65323	FOXD3.p2	BC138030|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC075734|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC098331|Rgnef|110596|Rho-guanine nucleotide exchange factor	NM_012026|Rgnef|110596|Rho-guanine nucleotide exchange factor	U73199|Rgnef|110596|Rho-guanine nucleotide exchange factor	BC022978|Rgnef|110596|Rho-guanine nucleotide exchange factor	AK173325|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr18_-_31476527_31476591	4.65096	FOXD3.p2	AK046484|Rit2|19762|Ras-like without CAAX 2	AK138206|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr13_+_49639847_49640001	4.6465	FOXD3.p2	AK014504|Aspn|66695|asporin	AK021386|Aspn|66695|asporin	AK085920|Aspn|66695|asporin	BC034888|Aspn|66695|asporin	BC145904|Aspn|66695|asporin	BC145930|Aspn|66695|asporin
mm9_v1_chr1_+_154802091_154802137	4.64409	FOXD3.p2	AK084041|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	AK083532|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr4_-_88368313_88368424	4.64018	FOXD3.p2	AK129338|Klhl9|242521|kelch-like 9 (Drosophila)	BC094556|Klhl9|242521|kelch-like 9 (Drosophila)	AK049803|Klhl9|242521|kelch-like 9 (Drosophila)	AK033231|Klhl9|242521|kelch-like 9 (Drosophila)	NM_172871|Klhl9|242521|kelch-like 9 (Drosophila)
mm9_v1_chr9_-_112090150_112090479	4.61737	FOXD3.p2	BC128376|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AF324451|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_033264|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK159004|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK002950|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	BC027107|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	AK160860|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177615|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_001177620|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21	NM_028755|Arpp21|74100|cyclic AMP-regulated phosphoprotein, 21
mm9_v1_chr17_+_71168939_71168940	4.60852	FOXD3.p2	AK034215|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr2_+_97306600_97306623	4.60562	FOXD3.p2	
mm9_v1_chr1_+_180168023_180168042	4.59811	FOXD3.p2	AK216786|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr16_-_85173930_85173941	4.59757	FOXD3.p2	AK159718|App|11820|amyloid beta (A4) precursor protein	M18373|App|11820|amyloid beta (A4) precursor protein	U84012|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr19_-_40588297_40588344	4.58987	FOXD3.p2	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr5_-_138596915_138596971	4.57502	FOXD3.p2	BC052453|Zfp113|56314|zinc finger protein 113	BC054525|Zfp113|56314|zinc finger protein 113	BC056991|Zfp113|56314|zinc finger protein 113	AF167320|Zfp113|56314|zinc finger protein 113	AK076349|Zfp113|56314|zinc finger protein 113	AK220556|Zfp113|56314|zinc finger protein 113	NM_019747|Zfp113|56314|zinc finger protein 113
mm9_v1_chr4_+_126287086_126287097	4.57476	FOXD3.p2	NM_001013755|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene	NM_001145950|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene
mm9_v1_chrX_+_136916509_136916509	4.57111	FOXD3.p2	AK047241|Frmpd3|245643|FERM and PDZ domain containing 3	NM_177750|Frmpd3|245643|FERM and PDZ domain containing 3
mm9_v1_chr12_+_88784853_88784880	4.56843	FOXD3.p2	AK007699|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC116739|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC116741|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC048513|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	AK028746|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC065396|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	AJ293625|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene	BC100567|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene
mm9_v1_chr13_-_111070225_111070335	4.55866	FOXD3.p2	AB232589|Rab3c|67295|RAB3C, member RAS oncogene family	AF312037|Rab3c|67295|RAB3C, member RAS oncogene family	AJ310532|Rab3c|67295|RAB3C, member RAS oncogene family	BC114335|Rab3c|67295|RAB3C, member RAS oncogene family	AY026947|Rab3c|67295|RAB3C, member RAS oncogene family	AK079574|Rab3c|67295|RAB3C, member RAS oncogene family	AK148904|Rab3c|67295|RAB3C, member RAS oncogene family	AK014132|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr16_+_41532938_41533160	4.54662	FOXD3.p2	BC059067|Lsamp|268890|limbic system-associated membrane protein	AK158702|Lsamp|268890|limbic system-associated membrane protein	AK030681|Lsamp|268890|limbic system-associated membrane protein
mm9_v1_chr11_-_73137838_73138062	4.54384	FOXD3.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chrX_-_150130711_150130822	4.54207	FOXD3.p2	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr7_-_133709900_133709929	4.53897	FOXD3.p2	BC025032|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK013160|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK009925|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK088076|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK166743|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C
mm9_v1_chr1_+_154802144_154802177	4.52887	FOXD3.p2	AK129155|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr16_-_23520662_23520727	4.52544	FOXD3.p2	BC131637|Masp1|17174|mannan-binding lectin serine peptidase 1	BC131638|Masp1|17174|mannan-binding lectin serine peptidase 1	NM_008555|Masp1|17174|mannan-binding lectin serine peptidase 1	AK032944|Masp1|17174|mannan-binding lectin serine peptidase 1	AB049755|Masp1|17174|mannan-binding lectin serine peptidase 1	D16492|Masp1|17174|mannan-binding lectin serine peptidase 1	AK043055|Masp1|17174|mannan-binding lectin serine peptidase 1	AK031598|Masp1|17174|mannan-binding lectin serine peptidase 1
mm9_v1_chr10_+_111708176_111708178	4.51946	FOXD3.p2	AK045425|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	BC116289|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	BC116290|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2	NM_001025581|Kcnc2|268345|potassium voltage gated channel, Shaw-related subfamily, member 2
mm9_v1_chr11_-_118162557_118162687	4.50153	FOXD3.p2	
mm9_v1_chrX_+_131252456_131252527	4.50052	FOXD3.p2	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr11_-_101026888_101026952	4.499	FOXD3.p2	BC024538|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr1_+_174012909_174013066	4.48579	FOXD3.p2	AK171625|Copa|12847|coatomer protein complex subunit alpha	AK043479|Copa|12847|coatomer protein complex subunit alpha	AK164910|Copa|12847|coatomer protein complex subunit alpha	BC047429|Copa|12847|coatomer protein complex subunit alpha	BC024070|Copa|12847|coatomer protein complex subunit alpha	AF248032|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr15_-_8660729_8660806	4.47227	FOXD3.p2	BC058711|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3	NM_148938|Slc1a3|20512|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm9_v1_chr5_-_5514787_5514975	4.46299	FOXD3.p2	NM_001193660|Cldn12|64945|claudin 12	AK166110|Cldn12|64945|claudin 12	AK049331|Cldn12|64945|claudin 12	AK132155|Cldn12|64945|claudin 12	NM_001193659|Cldn12|64945|claudin 12	NM_001193661|Cldn12|64945|claudin 12	AK128999|Cldn12|64945|claudin 12	BC024057|Cldn12|64945|claudin 12	NM_022890|Cldn12|64945|claudin 12
mm9_v1_chr6_+_90416405_90416438	4.45955	FOXD3.p2	BC013486|Klf15|66277|Kruppel-like factor 15	AF317225|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr6_-_136824323_136824329	4.4549	FOXD3.p2	AK018719|Mgp|17313|matrix Gla protein	AK159591|Mgp|17313|matrix Gla protein	AK159931|Mgp|17313|matrix Gla protein	NM_008597|Mgp|17313|matrix Gla protein
mm9_v1_chr3_-_98663713_98663719	4.45478	FOXD3.p2	AK146665|Hsd3b1|15492|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	AK147114|Hsd3b1|15492|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	NM_008293|Hsd3b1|15492|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
mm9_v1_chr19_+_45101318_45101473	4.44847	FOXD3.p2	AK202462|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK203408|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK205448|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK210216|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215584|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215776|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK217660|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr6_-_145024596_145024703	4.44123	FOXD3.p2	BC053706|Bcat1|12035|branched chain aminotransferase 1, cytosolic	X17502|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK167232|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK166971|Bcat1|12035|branched chain aminotransferase 1, cytosolic	NM_007532|Bcat1|12035|branched chain aminotransferase 1, cytosolic	AK168249|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr14_-_104243379_104243389	4.43651	FOXD3.p2	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr5_-_144775583_144775788	4.42951	FOXD3.p2	AK213761|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC048077|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_177682|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK090008|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK171671|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK172392|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK146704|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK150793|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152328|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152576|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK153160|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK164888|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
mm9_v1_chrX_+_160811667_160811697	4.42059	FOXD3.p2	D89628|Figf|14205|c-fos induced growth factor	BC030037|Figf|14205|c-fos induced growth factor	BC062809|Figf|14205|c-fos induced growth factor
mm9_v1_chr19_-_34329804_34329828	4.41465	FOXD3.p2	X13297|Acta2|11475|actin, alpha 2, smooth muscle, aorta	BC064800|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK017374|Acta2|11475|actin, alpha 2, smooth muscle, aorta	AK156331|Acta2|11475|actin, alpha 2, smooth muscle, aorta	NM_007392|Acta2|11475|actin, alpha 2, smooth muscle, aorta
mm9_v1_chrX_-_7318412_7318449	4.41283	FOXD3.p2	BC053918|Ccdc120|54648|coiled-coil domain containing 120	NM_207202|Ccdc120|54648|coiled-coil domain containing 120
mm9_v1_chr10_+_19949600_19949600	4.41041	FOXD3.p2	AK008018|Mtap7|17761|microtubule-associated protein 7	NM_001198636|Mtap7|17761|microtubule-associated protein 7
mm9_v1_chr19_-_47125334_47125422	4.40231	FOXD3.p2	BC016195|Pcgf6|71041|polycomb group ring finger 6	NM_027654|Pcgf6|71041|polycomb group ring finger 6	AK016709|Pcgf6|71041|polycomb group ring finger 6	AB047007|Pcgf6|71041|polycomb group ring finger 6	BC089460|Pcgf6|71041|polycomb group ring finger 6	AK132448|Pcgf6|71041|polycomb group ring finger 6	AK155067|Pcgf6|71041|polycomb group ring finger 6
mm9_v1_chr18_-_31476721_31476786	4.3993	FOXD3.p2	U71202|Rit2|19762|Ras-like without CAAX 2	AK162953|Rit2|19762|Ras-like without CAAX 2	AK040743|Rit2|19762|Ras-like without CAAX 2	AK041418|Rit2|19762|Ras-like without CAAX 2	BC018267|Rit2|19762|Ras-like without CAAX 2	NM_009065|Rit2|19762|Ras-like without CAAX 2	AK140726|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr17_-_23736453_23736453	4.39711	FOXD3.p2	AK030240|Zfp13|22654|zinc finger protein 13	NM_011747|Zfp13|22654|zinc finger protein 13
mm9_v1_chr4_+_94281210_94281261	4.38686	FOXD3.p2	NM_026319|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC005798|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK014770|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK011690|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	AK053369|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC023760|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)	BC049156|Ift74|67694|intraflagellar transport 74 homolog (Chlamydomonas)
mm9_v1_chr8_-_114378162_114378252	4.37862	FOXD3.p2	AK160532|Cfdp1|23837|craniofacial development protein 1	BC005589|Cfdp1|23837|craniofacial development protein 1	AB010828|Cfdp1|23837|craniofacial development protein 1	NM_011801|Cfdp1|23837|craniofacial development protein 1	Y08219|Cfdp1|23837|craniofacial development protein 1	AK133989|Cfdp1|23837|craniofacial development protein 1
mm9_v1_chr10_+_18189773_18189786	4.368	FOXD3.p2	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr9_-_58006851_58007027	4.36661	FOXD3.p2	BC006602|Islr|26968|immunoglobulin superfamily containing leucine-rich repeat	NM_012043|Islr|26968|immunoglobulin superfamily containing leucine-rich repeat
mm9_v1_chr5_+_149114763_149114791	4.35762	FOXD3.p2	AK019985|Mtus2|77521|microtubule associated tumor suppressor candidate 2
mm9_v1_chrX_-_161765324_161765332	4.33261	FOXD3.p2	AK139335|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr6_+_129483206_129483210	4.33168	FOXD3.p2	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr7_-_17501647_17501670	4.32967	FOXD3.p2	AK049104|Calm3|12315|calmodulin 3
mm9_v1_chrX_+_7496899_7497045	4.32949	FOXD3.p2	AF181560|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013892|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AF293356|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK076137|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK002969|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	BC012263|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor
mm9_v1_chrX_+_82293610_82293751	4.32632	FOXD3.p2	AK045257|Dmd|13405|dystrophin, muscular dystrophy	AK013510|Dmd|13405|dystrophin, muscular dystrophy	AK075809|Dmd|13405|dystrophin, muscular dystrophy	AK087829|Dmd|13405|dystrophin, muscular dystrophy	AK036936|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr11_-_109957250_109957250	4.32584	FOXD3.p2	NM_153145|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a
mm9_v1_chr7_-_110962324_110962382	4.32108	FOXD3.p2	AB020013|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020015|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020017|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB364477|Hbb-b1|15129|hemoglobin, beta adult major chain	AB364478|Hbb-b2|15130|hemoglobin, beta adult minor chain	AF149782|Hbb-b2|15130|hemoglobin, beta adult minor chain
mm9_v1_chr11_-_96678887_96679011	4.30402	FOXD3.p2	AK193504|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK201206|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr10_-_126959446_126959510	4.29071	FOXD3.p2	AK037339|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	BC004825|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK051207|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	NM_028230|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK162421|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chr9_-_103125934_103125973	4.28492	FOXD3.p2	BC018573|Trf|22041|transferrin
mm9_v1_chr8_+_114464651_114464671	4.27671	FOXD3.p2	
mm9_v1_chr18_+_80315134_80315153	4.2756	FOXD3.p2	AK010699|Pard6g|93737|par-6 partitioning defective 6 homolog gamma (C. elegans)
mm9_v1_chr3_+_68376289_68376313	4.27518	FOXD3.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr14_-_104243541_104243687	4.2735	FOXD3.p2	BC026553|Ednrb|13618|endothelin receptor type B
mm9_v1_chr14_+_26761977_26762068	4.26744	FOXD3.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_26901730_26901821	4.26744	FOXD3.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_27041341_27041432	4.26744	FOXD3.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr9_+_72584532_72584702	4.25683	FOXD3.p2	BC007184|Nedd4|17999|neural precursor cell expressed, developmentally down-regulated 4
mm9_v1_chr4_+_5571316_5571381	4.25624	FOXD3.p2	AK159054|Fam110b|242297|family with sequence similarity 110, member B	AK163184|Fam110b|242297|family with sequence similarity 110, member B	AK052596|Fam110b|242297|family with sequence similarity 110, member B	NM_173426|Fam110b|242297|family with sequence similarity 110, member B	AK005911|Fam110b|242297|family with sequence similarity 110, member B
mm9_v1_chr14_+_120674921_120674929	4.24711	FOXD3.p2	AK151913|Mbnl2|105559|muscleblind-like 2	AK151926|Mbnl2|105559|muscleblind-like 2	AK151957|Mbnl2|105559|muscleblind-like 2	AK028797|Mbnl2|105559|muscleblind-like 2	AK085709|Mbnl2|105559|muscleblind-like 2	AK164372|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr8_+_12949417_12949485	4.23614	FOXD3.p2	NM_001159485|Mcf2l|17207|mcf.2 transforming sequence-like	NM_001159486|Mcf2l|17207|mcf.2 transforming sequence-like	AK170186|Mcf2l|17207|mcf.2 transforming sequence-like	AK170558|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr16_+_96689322_96689354	4.21999	FOXD3.p2	
mm9_v1_chr16_+_93683426_93683502	4.20867	FOXD3.p2	AK003232|Cbr3|109857|carbonyl reductase 3	BC028763|Cbr3|109857|carbonyl reductase 3	NM_173047|Cbr3|109857|carbonyl reductase 3	AK028150|Cbr3|109857|carbonyl reductase 3	BC096658|Cbr3|109857|carbonyl reductase 3	BC087735|Cbr3|109857|carbonyl reductase 3
mm9_v1_chr3_-_90237092_90237456	4.20429	FOXD3.p2	BC055344|Ints3|229543|integrator complex subunit 3	AK033296|Ints3|229543|integrator complex subunit 3	AK146699|Ints3|229543|integrator complex subunit 3
mm9_v1_chr18_+_37105758_37105860	4.19122	FOXD3.p2	AK129120|Pcdha3|192163|protocadherin alpha 3	BC141348|Pcdha3|192163|protocadherin alpha 3	AY013761|Pcdha3|192163|protocadherin alpha 3	NM_138662|Pcdha3|192163|protocadherin alpha 3
mm9_v1_chr16_-_18407565_18407802	4.17582	FOXD3.p2	AK084547|Comt|12846|catechol-O-methyltransferase	AK133500|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr2_-_52532100_52532129	4.1736	FOXD3.p2	AK147338|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit	NM_001037099|Cacnb4|12298|calcium channel, voltage-dependent, beta 4 subunit
mm9_v1_chr14_+_48092235_48092236	4.16838	FOXD3.p2	AK020018|Fbxo34|78938|F-box protein 34	NM_001146085|Fbxo34|78938|F-box protein 34	NM_001146086|Fbxo34|78938|F-box protein 34	NM_030236|Fbxo34|78938|F-box protein 34
mm9_v1_chr19_+_23241546_23241602	4.16702	FOXD3.p2	AK009928|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr6_-_93628981_93629110	4.15861	FOXD3.p2	AF027505|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK081387|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr13_-_100286446_100286519	4.1571	FOXD3.p2	BC019183|Mtap1b|17755|microtubule-associated protein 1B	BC046287|Mtap1b|17755|microtubule-associated protein 1B	BC052016|Mtap1b|17755|microtubule-associated protein 1B	BC078457|Mtap1b|17755|microtubule-associated protein 1B	BC138033|Mtap1b|17755|microtubule-associated protein 1B	BC138034|Mtap1b|17755|microtubule-associated protein 1B	BC037105|Mtap1b|17755|microtubule-associated protein 1B	X51396|Mtap1b|17755|microtubule-associated protein 1B	AK158307|Mtap1b|17755|microtubule-associated protein 1B
mm9_v1_chr16_+_17045284_17045304	4.14868	FOXD3.p2	AK018549|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr18_+_37885359_37885546	4.13533	FOXD3.p2	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr3_+_129235336_129235458	4.13387	FOXD3.p2	AK167373|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AB072039|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC040097|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC100576|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AF480860|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK165847|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC098492|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr5_-_92471976_92472071	4.12274	FOXD3.p2	BC117894|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	BC117895|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029066|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_177270|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029065|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_016912|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK144574|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm9_v1_chr2_+_174171943_174171964	4.11844	FOXD3.p2	
mm9_v1_chr4_-_133101912_133101941	4.1153	FOXD3.p2	NM_010948|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)
mm9_v1_chr6_-_145024451_145024466	4.10529	FOXD3.p2	AK012821|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chrX_+_34894843_34894843	4.10341	FOXD3.p2	AJ972667|Rhox4c|434759|reproductive homeobox 4C	NM_001039689|Rhox4c|434759|reproductive homeobox 4C
mm9_v1_chr3_+_115711207_115711327	4.09931	FOXD3.p2	NM_001163514|Extl2|58193|exostoses (multiple)-like 2	AF200973|Extl2|58193|exostoses (multiple)-like 2	AK019370|Extl2|58193|exostoses (multiple)-like 2
mm9_v1_chr15_-_96829997_96830015	4.09733	FOXD3.p2	AK005887|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr3_-_152645206_152645210	4.0904	FOXD3.p2	AK042683|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr7_-_51926142_51926212	4.08097	FOXD3.p2	AY363100|Myh14|71960|myosin, heavy polypeptide 14
mm9_v1_chrX_+_34847000_34847131	4.07819	FOXD3.p2	AJ972666|Rhox4b|57737|reproductive homeobox 4B	NM_021300|Rhox4b|57737|reproductive homeobox 4B	AF265350|Rhox4b|57737|reproductive homeobox 4B	BC172126|Rhox4b|57737|reproductive homeobox 4B	BC172128|Rhox4e|194856|reproductive homeobox 4E	AB221641|Rhox4d|664610|reproductive homeobox 4D
mm9_v1_chr3_-_152645143_152645180	4.07808	FOXD3.p2	AB028840|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	BC055737|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	NM_012028|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AB030836|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK034387|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK038434|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr5_-_93611701_93611836	4.07793	FOXD3.p2	
mm9_v1_chr2_+_32484995_32485061	4.07505	FOXD3.p2	NM_021515|Ak1|11636|adenylate kinase 1	AJ010109|Ak1|11636|adenylate kinase 1	BC054366|Ak1|11636|adenylate kinase 1
mm9_v1_chr1_+_45401659_45401671	4.07493	FOXD3.p2	AK079113|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr2_+_163428044_163428072	4.05823	FOXD3.p2	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr14_-_70748237_70748239	4.05466	FOXD3.p2	AK090193|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AK050076|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135152|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr16_+_43640198_43640217	4.0544	FOXD3.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr6_-_145024487_145024530	4.05172	FOXD3.p2	AK167368|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr16_+_13986691_13986753	4.05171	FOXD3.p2	AK049997|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK076136|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK139470|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK136859|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	NM_144518|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK019307|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	BC022741|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK035868|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene
mm9_v1_chr4_+_101169252_101169283	4.05101	FOXD3.p2	NM_198412|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	BC064460|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr15_+_16707855_16707855	4.05085	FOXD3.p2	NM_009869|Cdh9|12565|cadherin 9
mm9_v1_chr14_-_52533039_52533074	4.04721	FOXD3.p2	AK158900|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr7_-_72516109_72516162	4.03859	FOXD3.p2	D14340|Tjp1|21872|tight junction protein 1	NM_001163574|Tjp1|21872|tight junction protein 1	NM_009386|Tjp1|21872|tight junction protein 1
mm9_v1_chr2_-_121299719_121299736	4.03565	FOXD3.p2	BC005728|Mfap1b|100034361|microfibrillar-associated protein 1B
mm9_v1_chr3_+_133899454_133899460	4.03424	FOXD3.p2	BC065149|Cxxc4|319478|CXXC finger 4
mm9_v1_chr13_-_25361773_25361915	4.03298	FOXD3.p2	AK138191|Nrsn1|22360|neurensin 1	D83206|Nrsn1|22360|neurensin 1	AK160941|Nrsn1|22360|neurensin 1	NM_009513|Nrsn1|22360|neurensin 1
mm9_v1_chr7_+_107422781_107422864	4.02762	FOXD3.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr6_-_137519312_137519326	4.02721	FOXD3.p2	AK149683|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr1_+_95582188_95582371	4.02657	FOXD3.p2	AK156243|Bok|51800|BCL2-related ovarian killer protein	NM_016778|Bok|51800|BCL2-related ovarian killer protein	AF027707|Bok|51800|BCL2-related ovarian killer protein	AK171258|Bok|51800|BCL2-related ovarian killer protein	BC030069|Bok|51800|BCL2-related ovarian killer protein	AK168373|Bok|51800|BCL2-related ovarian killer protein
mm9_v1_chr3_+_129235284_129235325	4.02566	FOXD3.p2	AK087440|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AK029029|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	NM_130450|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	BC051041|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)	AY053453|Elovl6|170439|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm9_v1_chr5_+_89012600_89012641	4.0172	FOXD3.p2	AK045610|Rufy3|52822|RUN and FYVE domain containing 3	AK083242|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr7_+_97529155_97529155	4.0116	FOXD3.p2	NM_001040086|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr11_-_59220890_59220958	4.01058	FOXD3.p2	AK213485|Snap47|67826|synaptosomal-associated protein, 47
mm9_v1_chr15_+_18750083_18750083	4.01025	FOXD3.p2	AK138606|Cdh10|320873|cadherin 10	NM_009865|Cdh10|320873|cadherin 10
mm9_v1_chr11_-_86887549_86887638	4.00989	FOXD3.p2	BC016541|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK011487|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK013864|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK016023|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK167812|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	NM_025638|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1
mm9_v1_chr14_+_120674933_120674934	4.00985	FOXD3.p2	AK159213|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr14_-_47006944_47006954	4.00647	FOXD3.p2	BC052846|Bmp4|12159|bone morphogenetic protein 4
mm9_v1_chr5_+_104864146_104864160	3.99534	FOXD3.p2	BC020355|Spp1|20750|secreted phosphoprotein 1	BC029991|Spp1|20750|secreted phosphoprotein 1	BC057858|Spp1|20750|secreted phosphoprotein 1	BC002113|Spp1|20750|secreted phosphoprotein 1	BC080720|Spp1|20750|secreted phosphoprotein 1	J04806|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr10_+_122701051_122701245	3.99493	FOXD3.p2	AK139403|Fam19a2|268354|family with sequence similarity 19, member A2	NM_182807|Fam19a2|268354|family with sequence similarity 19, member A2	AK140763|Fam19a2|268354|family with sequence similarity 19, member A2	BC027082|Fam19a2|268354|family with sequence similarity 19, member A2
mm9_v1_chr18_-_25912453_25912483	3.99409	FOXD3.p2	AK161918|Celf4|108013|CUGBP, Elav-like family member 4	BC048405|Celf4|108013|CUGBP, Elav-like family member 4	BC052744|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146292|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146293|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146294|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146295|Celf4|108013|CUGBP, Elav-like family member 4	NM_001174074|Celf4|108013|CUGBP, Elav-like family member 4	NM_133195|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr4_+_24825226_24825304	3.98419	FOXD3.p2	NM_026742|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK160341|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK034728|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK019042|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	BC028764|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK003553|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
mm9_v1_chr2_-_3283840_3283862	3.97608	FOXD3.p2	BC025001|Olah|99035|oleoyl-ACP hydrolase	NM_145921|Olah|99035|oleoyl-ACP hydrolase	AK087571|Olah|99035|oleoyl-ACP hydrolase
mm9_v1_chr4_+_148913978_148913983	3.96748	FOXD3.p2	AK009066|Ctnnbip1|67087|catenin beta interacting protein 1
mm9_v1_chr17_-_85461840_85461859	3.96487	FOXD3.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr16_+_94664089_94664229	3.96083	FOXD3.p2	AK164492|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr8_-_47292863_47292905	3.95538	FOXD3.p2	
mm9_v1_chr11_-_46503858_46503858	3.95519	FOXD3.p2	AB009015|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2	NM_001161356|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr16_-_21995441_21995614	3.93761	FOXD3.p2	AY093499|Liph|239759|lipase, member H	AK048150|Liph|239759|lipase, member H	NM_153404|Liph|239759|lipase, member H	BC037489|Liph|239759|lipase, member H	AK161067|Liph|239759|lipase, member H	AK035498|Liph|239759|lipase, member H	AK134352|Liph|239759|lipase, member H	AK136503|Liph|239759|lipase, member H	AK162492|Liph|239759|lipase, member H	AK137278|Liph|239759|lipase, member H	NM_001083894|Liph|239759|lipase, member H
mm9_v1_chr2_+_173563060_173563229	3.93362	FOXD3.p2	BC048231|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	NM_019806|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	BC057123|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK050632|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK081908|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AF115504|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK160925|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK172080|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr13_-_60278558_60278627	3.92754	FOXD3.p2	BC058628|Gas1|14451|growth arrest specific 1
mm9_v1_chr19_+_32694494_32694583	3.92591	FOXD3.p2	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr14_-_111154292_111154370	3.91561	FOXD3.p2	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chr6_-_102414660_102414660	3.91164	FOXD3.p2	NM_008779|Cntn3|18488|contactin 3
mm9_v1_chr4_-_33010429_33010479	3.91158	FOXD3.p2	BC065177|Ankrd6|140577|ankyrin repeat domain 6	NM_001012450|Ankrd6|140577|ankyrin repeat domain 6	NM_080471|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr1_-_58561631_58561830	3.90263	FOXD3.p2	BC015257|Orc2|18393|origin recognition complex, subunit 2	NM_008765|Orc2|18393|origin recognition complex, subunit 2	U27457|Orc2|18393|origin recognition complex, subunit 2	AK048408|Orc2|18393|origin recognition complex, subunit 2	AK133604|Orc2|18393|origin recognition complex, subunit 2	AK146281|Orc2|18393|origin recognition complex, subunit 2	AK146859|Orc2|18393|origin recognition complex, subunit 2	AK051747|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr10_-_126700387_126700418	3.89933	FOXD3.p2	AK220479|Kif5a|16572|kinesin family member 5A	AK140769|Kif5a|16572|kinesin family member 5A	NM_001039000|Kif5a|16572|kinesin family member 5A	NM_008447|Kif5a|16572|kinesin family member 5A
mm9_v1_chr2_+_155215225_155215281	3.8958	FOXD3.p2	AK079304|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr11_-_58615400_58615517	3.89475	FOXD3.p2	FJ468008|Fam183b|75429|family with sequence similarity 183, member B	BC094630|Fam183b|75429|family with sequence similarity 183, member B	BC061254|Fam183b|75429|family with sequence similarity 183, member B	BC048748|Fam183b|75429|family with sequence similarity 183, member B	AK157972|Fam183b|75429|family with sequence similarity 183, member B	AK013920|Fam183b|75429|family with sequence similarity 183, member B	NM_001162878|Fam183b|75429|family with sequence similarity 183, member B	NM_029283|Fam183b|75429|family with sequence similarity 183, member B	BC126964|Fam183b|75429|family with sequence similarity 183, member B	BC117741|Fam183b|75429|family with sequence similarity 183, member B
mm9_v1_chrX_+_155897136_155897153	3.88482	FOXD3.p2	AK005554|Mtap7d2|78283|MAP7 domain containing 2	AK030316|Mtap7d2|78283|MAP7 domain containing 2
mm9_v1_chr11_+_75195846_75195864	3.8805	FOXD3.p2	AK173306|Smyd4|319822|SET and MYND domain containing 4
mm9_v1_chr8_+_107951514_107951547	3.8692	FOXD3.p2	AK133042|Lrrc36|270091|leucine rich repeat containing 36	NM_001033371|Lrrc36|270091|leucine rich repeat containing 36	NM_001170789|Lrrc36|270091|leucine rich repeat containing 36	BC150957|Lrrc36|270091|leucine rich repeat containing 36	BC172120|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr18_+_80409068_80409205	3.86833	FOXD3.p2	AK183256|Txnl4a|27366|thioredoxin-like 4A
mm9_v1_chr11_+_29640992_29641009	3.86787	FOXD3.p2	AK206171|Rtn4|68585|reticulon 4
mm9_v1_chr2_-_113878535_113878550	3.85724	FOXD3.p2	BC062138|Actc1|11464|actin, alpha, cardiac muscle 1	AK014303|Actc1|11464|actin, alpha, cardiac muscle 1	AK146496|Actc1|11464|actin, alpha, cardiac muscle 1	AK146899|Actc1|11464|actin, alpha, cardiac muscle 1	AK168637|Actc1|11464|actin, alpha, cardiac muscle 1	AK168661|Actc1|11464|actin, alpha, cardiac muscle 1	AK168831|Actc1|11464|actin, alpha, cardiac muscle 1	AK169161|Actc1|11464|actin, alpha, cardiac muscle 1	AK169165|Actc1|11464|actin, alpha, cardiac muscle 1	BC100600|Actc1|11464|actin, alpha, cardiac muscle 1	NM_009608|Actc1|11464|actin, alpha, cardiac muscle 1	AK014307|Actc1|11464|actin, alpha, cardiac muscle 1
mm9_v1_chr19_+_10525829_10525836	3.84905	FOXD3.p2	
mm9_v1_chr4_+_146125090_146125090	3.8477	FOXD3.p2	BC108352|Zfp600|667666|zinc finger protein 600	NM_001177545|Zfp600|667666|zinc finger protein 600
mm9_v1_chr18_+_37833939_37833988	3.83931	FOXD3.p2	BC060691|Pcdhga3|93711|protocadherin gamma subfamily A, 3	NM_033586|Pcdhga3|93711|protocadherin gamma subfamily A, 3
mm9_v1_chr12_+_110884340_110884400	3.83497	FOXD3.p2	AF498294|Rian|75745|RNA imprinted and accumulated in nucleus	AB063319|Rian|75745|RNA imprinted and accumulated in nucleus	AK017440|Rian|75745|RNA imprinted and accumulated in nucleus
mm9_v1_chr3_-_115832327_115832378	3.83171	FOXD3.p2	U12884|Vcam1|22329|vascular cell adhesion molecule 1	M84487|Vcam1|22329|vascular cell adhesion molecule 1	L08431|Vcam1|22329|vascular cell adhesion molecule 1	BC011159|Vcam1|22329|vascular cell adhesion molecule 1	AK016465|Vcam1|22329|vascular cell adhesion molecule 1	AK030195|Vcam1|22329|vascular cell adhesion molecule 1	AK143401|Vcam1|22329|vascular cell adhesion molecule 1	AK162954|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr3_-_26052228_26052228	3.82617	FOXD3.p2	BC098461|Nlgn1|192167|neuroligin 1	NM_001163387|Nlgn1|192167|neuroligin 1
mm9_v1_chr13_-_60278723_60278734	3.82456	FOXD3.p2	X65128|Gas1|14451|growth arrest specific 1
mm9_v1_chr8_+_109206967_109207060	3.82174	FOXD3.p2	AK085030|Tmco7|272538|transmembrane and coiled-coil domains 7	NM_173037|Tmco7|272538|transmembrane and coiled-coil domains 7	AK077757|Tmco7|272538|transmembrane and coiled-coil domains 7	AK054283|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066134|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066869|Tmco7|272538|transmembrane and coiled-coil domains 7	BC069838|Tmco7|272538|transmembrane and coiled-coil domains 7	AK076373|Tmco7|272538|transmembrane and coiled-coil domains 7	AK173250|Tmco7|272538|transmembrane and coiled-coil domains 7
mm9_v1_chr2_+_172825651_172825682	3.81616	FOXD3.p2	AK146058|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK156681|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK014325|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK035278|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr5_-_110698814_110698873	3.80625	FOXD3.p2	BC052179|Pgam5|72542|phosphoglycerate mutase family member 5	BC021317|Pgam5|72542|phosphoglycerate mutase family member 5	AK162266|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr1_-_132625829_132625829	3.79391	FOXD3.p2	AK029659|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_001162415|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr7_+_31093768_31093831	3.77745	FOXD3.p2	NM_198027|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK082058|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	BC029805|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK170861|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)
mm9_v1_chr7_-_110962416_110962439	3.76246	FOXD3.p2	BC027434|Hbb-b2|15130|hemoglobin, beta adult minor chain	BC032264|Hbb-b2|15130|hemoglobin, beta adult minor chain	NM_016956|Hbb-b2|15130|hemoglobin, beta adult minor chain	AK168412|Hbb-b1|15129|hemoglobin, beta adult major chain	AK002394|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005496|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011033|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011050|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011052|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011057|Hbb-b1|15129|hemoglobin, beta adult major chain	AK012551|Hbb-b1|15129|hemoglobin, beta adult major chain	AK167615|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168477|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168584|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168819|Hbb-b1|15129|hemoglobin, beta adult major chain	AK028067|Hbb-b1|15129|hemoglobin, beta adult major chain	NM_008220|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr14_+_124059330_124059403	3.76207	FOXD3.p2	AK051773|Itgbl1|223272|integrin, beta-like 1	NM_145467|Itgbl1|223272|integrin, beta-like 1	BC020152|Itgbl1|223272|integrin, beta-like 1	AK029068|Itgbl1|223272|integrin, beta-like 1
mm9_v1_chr2_+_124978315_124978357	3.75993	FOXD3.p2	AK052750|Slc12a1|20495|solute carrier family 12, member 1	AK085455|Slc12a1|20495|solute carrier family 12, member 1	AK128928|Slc12a1|20495|solute carrier family 12, member 1	NM_001079690|Slc12a1|20495|solute carrier family 12, member 1	NM_183354|Slc12a1|20495|solute carrier family 12, member 1	U20973|Slc12a1|20495|solute carrier family 12, member 1	U20974|Slc12a1|20495|solute carrier family 12, member 1	U20975|Slc12a1|20495|solute carrier family 12, member 1	BC016888|Slc12a1|20495|solute carrier family 12, member 1
mm9_v1_chr15_-_54751515_54751700	3.75923	FOXD3.p2	EU131009|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	EU131010|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_001136077|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC003264|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AF123542|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK088491|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK161144|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK163881|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC058759|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK038940|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_015744|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr2_-_144376513_144376606	3.75752	FOXD3.p2	AF039563|Rbbp9|26450|retinoblastoma binding protein 9	BC050201|Rbbp9|26450|retinoblastoma binding protein 9	AK017606|Rbbp9|26450|retinoblastoma binding protein 9	BC011107|Rbbp9|26450|retinoblastoma binding protein 9	BC147814|Rbbp9|26450|retinoblastoma binding protein 9	BC147815|Rbbp9|26450|retinoblastoma binding protein 9	AK076944|Rbbp9|26450|retinoblastoma binding protein 9	NM_015754|Rbbp9|26450|retinoblastoma binding protein 9
mm9_v1_chr18_+_37663917_37664076	3.75555	FOXD3.p2	AK045399|Pcdhb20|93891|protocadherin beta 20	NM_053145|Pcdhb20|93891|protocadherin beta 20	AK046137|Pcdhb20|93891|protocadherin beta 20	AF326313|Pcdhb20|93891|protocadherin beta 20	AK045527|Pcdhb20|93891|protocadherin beta 20	BC031895|Pcdhb20|93891|protocadherin beta 20	AY013782|Pcdhb20|93891|protocadherin beta 20
mm9_v1_chr2_-_26236126_26236172	3.75263	FOXD3.p2	BC018169|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK077522|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	BC057031|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK136996|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK052107|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	NM_172339|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4
mm9_v1_chr13_+_49704471_49704523	3.75069	FOXD3.p2	AK075638|Ogn|18295|osteoglycin	AK163772|Ogn|18295|osteoglycin	D31951|Ogn|18295|osteoglycin	BC021939|Ogn|18295|osteoglycin
mm9_v1_chr2_+_76244603_76244617	3.73677	FOXD3.p2	AK037703|Osbpl6|99031|oxysterol binding protein-like 6	AK157944|Osbpl6|99031|oxysterol binding protein-like 6	AK220498|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr19_-_60937266_60937332	3.73663	FOXD3.p2	AF325263|Sfxn4|94281|sideroflexin 4	BC089535|Sfxn4|94281|sideroflexin 4	AK148530|Sfxn4|94281|sideroflexin 4	BC058211|Sfxn4|94281|sideroflexin 4	NM_053198|Sfxn4|94281|sideroflexin 4
mm9_v1_chr6_-_144997311_144997331	3.7335	FOXD3.p2	AK036309|Bcat1|12035|branched chain aminotransferase 1, cytosolic	NM_001024468|Bcat1|12035|branched chain aminotransferase 1, cytosolic
mm9_v1_chr1_+_33777252_33777263	3.72173	FOXD3.p2	AK016493|Rab23|19335|RAB23, member RAS oncogene family	NM_001159729|Rab23|19335|RAB23, member RAS oncogene family
mm9_v1_chr4_-_133101802_133101911	3.72027	FOXD3.p2	Y15522|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	X81443|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	BC011253|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK012777|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK032673|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK012321|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)	AK146323|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)
mm9_v1_chr16_-_22657283_22657317	3.71501	FOXD3.p2	AK083258|Dgkg|110197|diacylglycerol kinase, gamma	NM_138650|Dgkg|110197|diacylglycerol kinase, gamma
mm9_v1_chr10_-_80945379_80945426	3.70597	FOXD3.p2	AK132321|Celf5|319586|CUGBP, Elav-like family member 5
mm9_v1_chr8_-_47292973_47292977	3.69639	FOXD3.p2	AK186988|Slc25a4|11739|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
mm9_v1_chr8_-_73919683_73919738	3.69453	FOXD3.p2	BC026453|Ushbp1|234395|Usher syndrome 1C binding protein 1	AK043798|Ushbp1|234395|Usher syndrome 1C binding protein 1	NM_181418|Ushbp1|234395|Usher syndrome 1C binding protein 1	AK034939|Ushbp1|234395|Usher syndrome 1C binding protein 1
mm9_v1_chr11_-_98590680_98590748	3.68757	FOXD3.p2	AF126543|Med24|23989|mediator complex subunit 24	AK193218|Med24|23989|mediator complex subunit 24	AK020269|Med24|23989|mediator complex subunit 24	AK154618|Med24|23989|mediator complex subunit 24	AK158385|Med24|23989|mediator complex subunit 24	NM_011869|Med24|23989|mediator complex subunit 24
mm9_v1_chr8_+_114464639_114464646	3.68362	FOXD3.p2	BC026798|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr6_-_136824277_136824306	3.68121	FOXD3.p2	BC069922|Mgp|17313|matrix Gla protein	BC036991|Mgp|17313|matrix Gla protein	BC079478|Mgp|17313|matrix Gla protein
mm9_v1_chr1_+_130140700_130141098	3.68026	FOXD3.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr7_+_52471122_52471152	3.67588	FOXD3.p2	D50563|Tead2|21677|TEA domain family member 2	NM_011565|Tead2|21677|TEA domain family member 2
mm9_v1_chr6_+_4465627_4465644	3.67335	FOXD3.p2	AK160814|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr19_-_19185685_19185685	3.66794	FOXD3.p2	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr9_-_60535274_60535340	3.66668	FOXD3.p2	AK051325|Lrrc49|102747|leucine rich repeat containing 49	NM_001146047|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr2_-_5816381_5816442	3.65874	FOXD3.p2	AK160602|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK077701|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	NM_021305|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr11_-_30000031_30000152	3.65699	FOXD3.p2	AK079934|Spnb2|20742|spectrin beta 2
mm9_v1_chr11_+_52045464_52045596	3.64997	FOXD3.p2	NM_011543|Skp1a|21402|S-phase kinase-associated protein 1A	AK078330|Skp1a|21402|S-phase kinase-associated protein 1A	AK002983|Skp1a|21402|S-phase kinase-associated protein 1A	AK012498|Skp1a|21402|S-phase kinase-associated protein 1A	AK014245|Skp1a|21402|S-phase kinase-associated protein 1A	AK027909|Skp1a|21402|S-phase kinase-associated protein 1A	AK088339|Skp1a|21402|S-phase kinase-associated protein 1A	AK160198|Skp1a|21402|S-phase kinase-associated protein 1A	AK158209|Skp1a|21402|S-phase kinase-associated protein 1A	AK166673|Skp1a|21402|S-phase kinase-associated protein 1A	AK152609|Skp1a|21402|S-phase kinase-associated protein 1A	Z47088|Skp1a|21402|S-phase kinase-associated protein 1A	BC002115|Skp1a|21402|S-phase kinase-associated protein 1A	AF083214|Skp1a|21402|S-phase kinase-associated protein 1A
mm9_v1_chrX_-_91457942_91457985	3.64753	FOXD3.p2	BC036993|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AJ006587|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm9_v1_chr19_+_5741862_5742203	3.64702	FOXD3.p2	L40459|Ltbp3|16998|latent transforming growth factor beta binding protein 3	BC127051|Ltbp3|16998|latent transforming growth factor beta binding protein 3
mm9_v1_chr17_+_33961535_33961572	3.64235	FOXD3.p2	AK002476|Ndufa7|66416|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)	AK003468|Ndufa7|66416|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)	BC055698|Ndufa7|66416|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)	BC052817|Ndufa7|66416|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)	NM_023202|Ndufa7|66416|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)	AK010299|Ndufa7|66416|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)
mm9_v1_chr18_+_38476622_38476661	3.63618	FOXD3.p2	
mm9_v1_chr1_+_78507634_78507743	3.63169	FOXD3.p2	NM_026713|Mogat1|68393|monoacylglycerol O-acyltransferase 1	BC031920|Mogat1|68393|monoacylglycerol O-acyltransferase 1
mm9_v1_chr9_-_39411199_39411208	3.63119	FOXD3.p2	AK028282|AW551984|244810|expressed sequence AW551984	AK082321|AW551984|244810|expressed sequence AW551984
mm9_v1_chr17_+_8565260_8565260	3.62658	FOXD3.p2	NM_001161832|T2|21331|brachyury 2
mm9_v1_chr5_-_134790277_134790348	3.62399	FOXD3.p2	BC047387|Gtf2i|14886|general transcription factor II I
mm9_v1_chr12_-_84938095_84938119	3.61906	FOXD3.p2	AK170954|Zfyve1|217695|zinc finger, FYVE domain containing 1	NM_183154|Zfyve1|217695|zinc finger, FYVE domain containing 1	AK139825|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr15_-_82075137_82075176	3.61426	FOXD3.p2	AY243536|Cenpm|66570|centromere protein M	AY243537|Cenpm|66570|centromere protein M	AK011191|Cenpm|66570|centromere protein M	BC009160|Cenpm|66570|centromere protein M	AK168203|Cenpm|66570|centromere protein M	AK011227|Cenpm|66570|centromere protein M	AK011793|Cenpm|66570|centromere protein M	AK011755|Cenpm|66570|centromere protein M	AK010885|Cenpm|66570|centromere protein M	AK017679|Cenpm|66570|centromere protein M	AK011464|Cenpm|66570|centromere protein M	NM_025639|Cenpm|66570|centromere protein M	NM_178269|Cenpm|66570|centromere protein M
mm9_v1_chr7_-_49897957_49897973	3.61322	FOXD3.p2	AK162659|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene	NM_001034857|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene	AK141688|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene
mm9_v1_chr19_+_25107619_25107625	3.61118	FOXD3.p2	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr6_-_56654667_56654692	3.61072	FOXD3.p2	BC048459|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK008480|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK011218|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC061085|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK009617|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132626|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC132628|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_025520|Lsm5|66373|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr8_+_26830853_26830927	3.60916	FOXD3.p2	AK007542|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC039626|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr4_+_134479583_134479637	3.60556	FOXD3.p2	BC056986|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC046231|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr18_-_43532846_43532925	3.58967	FOXD3.p2	AK161509|Dpysl3|22240|dihydropyrimidinase-like 3	AK077000|Dpysl3|22240|dihydropyrimidinase-like 3	AK133040|Dpysl3|22240|dihydropyrimidinase-like 3	NM_001136086|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr2_+_14310024_14310041	3.57867	FOXD3.p2	NM_001012305|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	AK134622|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC089362|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113764|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12	BC113765|Slc39a12|277468|solute carrier family 39 (zinc transporter), member 12
mm9_v1_chr16_-_85030543_85030555	3.57799	FOXD3.p2	AK076506|App|11820|amyloid beta (A4) precursor protein	AK200287|App|11820|amyloid beta (A4) precursor protein	AK203089|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr14_+_117324518_117324572	3.5773	FOXD3.p2	AK164668|Gpc6|23888|glypican 6	AK135442|Gpc6|23888|glypican 6	NM_001079844|Gpc6|23888|glypican 6	NM_011821|Gpc6|23888|glypican 6
mm9_v1_chr7_+_27904968_27904975	3.57426	FOXD3.p2	NM_007817|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr18_+_23468585_23468619	3.56862	FOXD3.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr19_-_55177562_55177604	3.56392	FOXD3.p2	AK047295|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial	AK173202|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr16_-_4624877_4625001	3.56191	FOXD3.p2	AB073618|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	BC024346|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	BC096419|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AF349454|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AK003227|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AK008380|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	NM_025571|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
mm9_v1_chr7_+_52471161_52471287	3.56152	FOXD3.p2	AK144857|Tead2|21677|TEA domain family member 2	AK146595|Tead2|21677|TEA domain family member 2	AK132009|Tead2|21677|TEA domain family member 2	Y10026|Tead2|21677|TEA domain family member 2	AK137064|Tead2|21677|TEA domain family member 2	AK143155|Tead2|21677|TEA domain family member 2
mm9_v1_chr5_+_90890764_90890776	3.56034	FOXD3.p2	AK050644|Alb|11657|albumin
mm9_v1_chr8_+_123640069_123640092	3.55147	FOXD3.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chr2_+_181449669_181449860	3.54589	FOXD3.p2	AF043276|Oprl1|18389|opioid receptor-like 1	U09421|Oprl1|18389|opioid receptor-like 1	AK031926|Oprl1|18389|opioid receptor-like 1	AK079529|Oprl1|18389|opioid receptor-like 1	NM_011012|Oprl1|18389|opioid receptor-like 1	AK043275|Oprl1|18389|opioid receptor-like 1	AK044178|Oprl1|18389|opioid receptor-like 1	X91813|Oprl1|18389|opioid receptor-like 1	AK142474|Oprl1|18389|opioid receptor-like 1	BC050885|Oprl1|18389|opioid receptor-like 1	U04952|Oprl1|18389|opioid receptor-like 1	BC051982|Oprl1|18389|opioid receptor-like 1
mm9_v1_chr15_+_54964990_54964990	3.54584	FOXD3.p2	AK139888|Deptor|97998|DEP domain containing MTOR-interacting protein	NM_001037937|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr5_-_122906470_122906515	3.54184	FOXD3.p2	AK081191|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr5_-_37187799_37187854	3.5187	FOXD3.p2	BC085488|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr18_-_36942673_36942858	3.50874	FOXD3.p2	AK211613|Hars|15115|histidyl-tRNA synthetase	AK011685|Hars|15115|histidyl-tRNA synthetase	AK077437|Hars|15115|histidyl-tRNA synthetase	AK166826|Hars|15115|histidyl-tRNA synthetase	AK150081|Hars|15115|histidyl-tRNA synthetase	AK152329|Hars|15115|histidyl-tRNA synthetase	BC020088|Hars|15115|histidyl-tRNA synthetase	AK088824|Hars|15115|histidyl-tRNA synthetase	AK146922|Hars|15115|histidyl-tRNA synthetase	AK166892|Hars|15115|histidyl-tRNA synthetase	U39473|Hars|15115|histidyl-tRNA synthetase	NM_008214|Hars|15115|histidyl-tRNA synthetase
mm9_v1_chr13_-_111070392_111070417	3.50727	FOXD3.p2	AK014050|Rab3c|67295|RAB3C, member RAS oncogene family	NM_023852|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr17_+_85025830_85025873	3.50497	FOXD3.p2	BC030450|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	BC039070|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	NM_172256|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1	AK008822|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1
mm9_v1_chr11_-_60040448_60040491	3.49957	FOXD3.p2	AK013538|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr14_+_102237708_102237728	3.48984	FOXD3.p2	BC082553|Lmo7|380928|LIM domain only 7
mm9_v1_chr8_+_56040080_56040120	3.48978	FOXD3.p2	NM_153581|Gpm6a|234267|glycoprotein m6a
mm9_v1_chrX_+_160811458_160811498	3.4895	FOXD3.p2	NM_010216|Figf|14205|c-fos induced growth factor	X99572|Figf|14205|c-fos induced growth factor	BC080770|Figf|14205|c-fos induced growth factor
mm9_v1_chr18_+_37925619_37925770	3.48729	FOXD3.p2	BC054528|Pcdhga12|93724|protocadherin gamma subfamily A, 12	U88550|Pcdhga12|93724|protocadherin gamma subfamily A, 12	AY013795|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr3_+_137004089_137004128	3.48661	FOXD3.p2	AB034693|Emcn|59308|endomucin	AF060883|Emcn|59308|endomucin	AK164422|Emcn|59308|endomucin
mm9_v1_chr4_-_61496155_61496213	3.48518	FOXD3.p2	EU882233|Mup5|17844|major urinary protein 5	BC132310|Mup5|17844|major urinary protein 5	BC132312|Mup5|17844|major urinary protein 5	M16360|Mup5|17844|major urinary protein 5	NM_008649|Mup5|17844|major urinary protein 5
mm9_v1_chr9_-_39411708_39411856	3.48208	FOXD3.p2	AK049098|AW551984|244810|expressed sequence AW551984	NM_178737|AW551984|244810|expressed sequence AW551984	BC061211|AW551984|244810|expressed sequence AW551984
mm9_v1_chr17_-_25934035_25934080	3.48176	FOXD3.p2	BC132177|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr9_+_6168583_6168611	3.47847	FOXD3.p2	AK141551|Pdgfd|71785|platelet-derived growth factor, D polypeptide	AK003359|Pdgfd|71785|platelet-derived growth factor, D polypeptide	NM_027924|Pdgfd|71785|platelet-derived growth factor, D polypeptide
mm9_v1_chr17_+_19641774_19641774	3.47017	FOXD3.p2	NM_001104562|Vmn2r100|627537|vomeronasal 2, receptor 100
mm9_v1_chr6_-_137118197_137118219	3.46768	FOXD3.p2	AK028025|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	AK133734|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr8_-_67071497_67071512	3.46292	FOXD3.p2	
mm9_v1_chr13_-_111070344_111070365	3.46237	FOXD3.p2	AK164316|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr6_-_136824217_136824271	3.45948	FOXD3.p2	BC018338|Mgp|17313|matrix Gla protein	D00613|Mgp|17313|matrix Gla protein
mm9_v1_chr16_-_22657245_22657273	3.45914	FOXD3.p2	AK220294|Dgkg|110197|diacylglycerol kinase, gamma	AK087972|Dgkg|110197|diacylglycerol kinase, gamma	AK085470|Dgkg|110197|diacylglycerol kinase, gamma
mm9_v1_chrX_+_34928967_34929045	3.45249	FOXD3.p2	BC147696|Rhox4d|664610|reproductive homeobox 4D	BC172126|Rhox4b|57737|reproductive homeobox 4B	AJ972668|Rhox4d|664610|reproductive homeobox 4D	NM_001039695|Rhox4d|664610|reproductive homeobox 4D	AB221641|Rhox4d|664610|reproductive homeobox 4D
mm9_v1_chr3_+_136333670_136333672	3.44806	FOXD3.p2	AK150393|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr17_-_45708739_45708860	3.44233	FOXD3.p2	AK177268|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK178129|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK179913|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK180968|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK190429|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196204|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK218770|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr3_+_136333733_136333756	3.42894	FOXD3.p2	J05479|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	NM_008913|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	BC138612|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr7_-_67149962_67150045	3.4192	FOXD3.p2	BC069894|Snrpn|20646|small nuclear ribonucleoprotein N	BC024880|Snrpn|20646|small nuclear ribonucleoprotein N	BC019589|Snrpn|20646|small nuclear ribonucleoprotein N	BC132082|Snurf|84704|SNRPN upstream reading frame	BC132084|Snurf|84704|SNRPN upstream reading frame	AK013607|Snrpn|20646|small nuclear ribonucleoprotein N	AK144386|Snrpn|20646|small nuclear ribonucleoprotein N	AF101042|Snurf|84704|SNRPN upstream reading frame	NM_013670|Snrpn|20646|small nuclear ribonucleoprotein N	NM_033174|Snurf|84704|SNRPN upstream reading frame
mm9_v1_chr14_-_52532988_52533037	3.4142	FOXD3.p2	BC012963|Ndrg2|29811|N-myc downstream regulated gene 2	AB033921|Ndrg2|29811|N-myc downstream regulated gene 2	AK168011|Ndrg2|29811|N-myc downstream regulated gene 2	AK154597|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr7_+_137836116_137836140	3.40797	FOXD3.p2	AK165194|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr1_+_94803538_94803618	3.40458	FOXD3.p2	AK163560|Dusp28|67446|dual specificity phosphatase 28	AK002934|Dusp28|67446|dual specificity phosphatase 28	NM_175118|Dusp28|67446|dual specificity phosphatase 28	BC119127|Dusp28|67446|dual specificity phosphatase 28	BC051598|Dusp28|67446|dual specificity phosphatase 28	AK088940|Dusp28|67446|dual specificity phosphatase 28
mm9_v1_chr2_-_30214724_30214844	3.40003	FOXD3.p2	AF426314|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC024477|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	NM_139302|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK155248|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152409|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152502|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	EF676083|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK167762|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC028859|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2
mm9_v1_chr11_-_74491006_74491182	3.39913	FOXD3.p2	AK152284|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	AK164276|Pafah1b1|18472|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm9_v1_chr3_-_115832605_115832605	3.39592	FOXD3.p2	BC029823|Vcam1|22329|vascular cell adhesion molecule 1	NM_011693|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr10_+_96944961_96945010	3.39482	FOXD3.p2	NM_007833|Dcn|13179|decorin	AK147020|Dcn|13179|decorin
mm9_v1_chr8_+_56040553_56040581	3.38612	FOXD3.p2	BC024759|Gpm6a|234267|glycoprotein m6a	BC033394|Gpm6a|234267|glycoprotein m6a	S65735|Gpm6a|234267|glycoprotein m6a	BC029711|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr6_-_58974400_58974495	3.38264	FOXD3.p2	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chr8_-_97637241_97637241	3.37847	FOXD3.p2	AK132895|Kifc3|16582|kinesin family member C3	NM_001145832|Kifc3|16582|kinesin family member C3
mm9_v1_chr10_+_98478207_98478246	3.37815	FOXD3.p2	BC025199|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr18_+_37157533_37157533	3.37333	FOXD3.p2	AY013767|Pcdha9|192161|protocadherin alpha 9	NM_138661|Pcdha9|192161|protocadherin alpha 9
mm9_v1_chr6_+_17290478_17290486	3.37095	FOXD3.p2	AK010839|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr8_-_67171481_67171562	3.36831	FOXD3.p2	AK002935|Cpe|12876|carboxypeptidase E	AK013509|Cpe|12876|carboxypeptidase E
mm9_v1_chr17_+_31814873_31814975	3.36737	FOXD3.p2	AK143463|Cryaa|12954|crystallin, alpha A	BC085170|Cryaa|12954|crystallin, alpha A	BC085172|Cryaa|12954|crystallin, alpha A	NM_013501|Cryaa|12954|crystallin, alpha A	AJ310308|Cryaa|12954|crystallin, alpha A	BC092385|Cryaa|12954|crystallin, alpha A	J00376|Cryaa|12954|crystallin, alpha A
mm9_v1_chr2_+_143741050_143741074	3.35885	FOXD3.p2	NM_019771|Dstn|56431|destrin
mm9_v1_chr4_+_84851029_84851075	3.35874	FOXD3.p2	AK035210|Sh3gl2|20404|SH3-domain GRB2-like 2
mm9_v1_chr10_-_100051871_100051900	3.35617	FOXD3.p2	AK160693|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK036647|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK085292|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK077761|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK078231|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	NM_175128|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene
mm9_v1_chr7_+_13563196_13563254	3.35527	FOXD3.p2	AK041761|Zfp446|269870|zinc finger protein 446	BC117850|Zfp446|269870|zinc finger protein 446	BC117851|Zfp446|269870|zinc finger protein 446	NM_001168561|Zfp446|269870|zinc finger protein 446	NM_001168562|Zfp446|269870|zinc finger protein 446	NM_175558|Zfp446|269870|zinc finger protein 446	AK044666|Zfp446|269870|zinc finger protein 446	BC048909|Zfp446|269870|zinc finger protein 446
mm9_v1_chr18_+_78016353_78016381	3.34698	FOXD3.p2	AK164193|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr11_-_110112926_110113089	3.34633	FOXD3.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr14_-_122138082_122138150	3.33934	FOXD3.p2	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr4_+_57907600_57907648	3.33882	FOXD3.p2	BC034188|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr4_-_15872497_15872653	3.33499	FOXD3.p2	CT010405|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK010473|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK004725|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK168490|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK015692|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK146003|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK002756|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	BC046972|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	NM_026172|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial
mm9_v1_chr9_-_56533004_56533059	3.33342	FOXD3.p2	BC065696|Lingo1|235402|leucine rich repeat and Ig domain containing 1	BC052384|Lingo1|235402|leucine rich repeat and Ig domain containing 1	NM_181074|Lingo1|235402|leucine rich repeat and Ig domain containing 1
mm9_v1_chr6_-_137118238_137118241	3.33301	FOXD3.p2	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr7_-_29123775_29123801	3.33253	FOXD3.p2	AK146650|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)
mm9_v1_chr4_-_49562400_49562417	3.32987	FOXD3.p2	AK168997|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr3_+_134951618_134951625	3.32965	FOXD3.p2	AK007603|Bdh2|69772|3-hydroxybutyrate dehydrogenase, type 2
mm9_v1_chr10_-_79869505_79869569	3.32959	FOXD3.p2	AK013513|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK146292|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK168974|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	BC034408|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK003443|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	AK167946|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI	NM_025650|Uqcr11|66594|ubiquinol-cytochrome c reductase, complex III subunit XI
mm9_v1_chr3_-_86724793_86724854	3.32748	FOXD3.p2	NM_001195496|Dclk2|70762|doublecortin-like kinase 2	NM_001195497|Dclk2|70762|doublecortin-like kinase 2	NM_001195498|Dclk2|70762|doublecortin-like kinase 2	NM_001195499|Dclk2|70762|doublecortin-like kinase 2	NM_001195500|Dclk2|70762|doublecortin-like kinase 2	NM_027539|Dclk2|70762|doublecortin-like kinase 2
mm9_v1_chr16_-_15848722_15848771	3.32162	FOXD3.p2	
mm9_v1_chr5_+_118426792_118426794	3.32106	FOXD3.p2	AB093270|Fbxo21|231670|F-box protein 21
mm9_v1_chr14_+_120674913_120674920	3.31214	FOXD3.p2	AK220470|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr2_-_37502738_37502804	3.31109	FOXD3.p2	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr2_+_74714444_74714447	3.3098	FOXD3.p2	AK212919|Mtx2|53375|metaxin 2
mm9_v1_chrX_+_162608411_162608448	3.30796	FOXD3.p2	AK045118|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK160583|Gemin8|237221|gem (nuclear organelle) associated protein 8	NM_146238|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK085045|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK037580|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK047511|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK053774|Gemin8|237221|gem (nuclear organelle) associated protein 8
mm9_v1_chr9_-_119835967_119836242	3.30676	FOXD3.p2	AK198424|Gorasp1|74498|golgi reassembly stacking protein 1	AK209806|Gorasp1|74498|golgi reassembly stacking protein 1	AK213744|Gorasp1|74498|golgi reassembly stacking protein 1	AK204247|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr7_-_52230179_52230183	3.30371	FOXD3.p2	AK035790|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr10_+_40657980_40658124	3.30211	FOXD3.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chr11_+_56825192_56825257	3.29957	FOXD3.p2	NM_001113325|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	NM_008165|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr10_-_80693488_80693567	3.29631	FOXD3.p2	AY349150|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	BC048903|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038990|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	NM_178662|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK039411|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK028298|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038483|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK162959|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK086723|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)
mm9_v1_chr12_+_113209769_113209769	3.29533	FOXD3.p2	AB362563|Tdrd9|74691|tudor domain containing 9	NM_029056|Tdrd9|74691|tudor domain containing 9
mm9_v1_chr1_+_45368382_45368399	3.29193	FOXD3.p2	NM_009930|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr16_+_92086695_92086827	3.29161	FOXD3.p2	AK133105|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3
mm9_v1_chrX_-_72823345_72823551	3.28911	FOXD3.p2	AB232636|Rab39b|67790|RAB39B, member RAS oncogene family	BC052472|Rab39b|67790|RAB39B, member RAS oncogene family	AK039013|Rab39b|67790|RAB39B, member RAS oncogene family	AK048981|Rab39b|67790|RAB39B, member RAS oncogene family	AK160737|Rab39b|67790|RAB39B, member RAS oncogene family	NM_175122|Rab39b|67790|RAB39B, member RAS oncogene family	AK018257|Rab39b|67790|RAB39B, member RAS oncogene family	AK020665|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chrX_-_72823561_72823573	3.28871	FOXD3.p2	BC050853|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr8_+_56040211_56040342	3.28483	FOXD3.p2	BC043130|Gpm6a|234267|glycoprotein m6a	AK147245|Gpm6a|234267|glycoprotein m6a	AK147280|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr9_+_57770320_57770335	3.2806	FOXD3.p2	AK207788|Ubl7|69459|ubiquitin-like 7 (bone marrow stromal cell-derived)
mm9_v1_chr10_+_19868276_19868291	3.27367	FOXD3.p2	AK133267|Mtap7|17761|microtubule-associated protein 7
mm9_v1_chr6_+_30756073_30756380	3.26317	FOXD3.p2	AK031986|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2	AK039295|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2	AK087162|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2	AK086806|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr12_-_86611513_86611563	3.26146	FOXD3.p2	BC079861|Mlh3|217716|mutL homolog 3 (E coli)	NM_175337|Mlh3|217716|mutL homolog 3 (E coli)	BC072599|Mlh3|217716|mutL homolog 3 (E coli)	AK132195|Mlh3|217716|mutL homolog 3 (E coli)	AK035887|Mlh3|217716|mutL homolog 3 (E coli)
mm9_v1_chr3_-_38349112_38349206	3.25182	FOXD3.p2	BC051515|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr2_-_79296732_79296799	3.25042	FOXD3.p2	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr6_+_4853319_4853431	3.25017	FOXD3.p2	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr7_+_137836057_137836069	3.24708	FOXD3.p2	AB041546|Tacc2|57752|transforming, acidic coiled-coil containing protein 2	NM_021314|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr3_-_81949667_81949798	3.24134	FOXD3.p2	BC057327|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK031305|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK028558|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK004815|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AF297082|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	NM_021896|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3
mm9_v1_chr17_+_70871444_70871503	3.241	FOXD3.p2	NM_001128180|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK161941|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK163689|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr4_+_34841027_34841057	3.23222	FOXD3.p2	NM_009889|Cga|12640|glycoprotein hormones, alpha subunit	BC087926|Cga|12640|glycoprotein hormones, alpha subunit	J00643|Cga|12640|glycoprotein hormones, alpha subunit
mm9_v1_chr4_-_116312481_116312553	3.23169	FOXD3.p2	AK181349|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr1_-_25886551_25886551	3.22782	FOXD3.p2	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr6_-_122289630_122289670	3.218	FOXD3.p2	S73882|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73883|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73884|Phc1|13619|polyhomeotic-like 1 (Drosophila)	BC046535|Phc1|13619|polyhomeotic-like 1 (Drosophila)	AK167590|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr17_-_24769511_24769537	3.20915	FOXD3.p2	AK147302|Tsc2|22084|tuberous sclerosis 2	AK148072|Tsc2|22084|tuberous sclerosis 2	AK147874|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr6_-_71094313_71094369	3.20568	FOXD3.p2	BC025604|Thnsl2|232078|threonine synthase-like 2 (bacterial)	BC051244|Thnsl2|232078|threonine synthase-like 2 (bacterial)	AK165463|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_001033929|Thnsl2|232078|threonine synthase-like 2 (bacterial)	NM_178413|Thnsl2|232078|threonine synthase-like 2 (bacterial)
mm9_v1_chr9_+_6168660_6168794	3.20412	FOXD3.p2	BC030896|Pdgfd|71785|platelet-derived growth factor, D polypeptide	AF335583|Pdgfd|71785|platelet-derived growth factor, D polypeptide
mm9_v1_chr16_+_48283847_48283930	3.19735	FOXD3.p2	AK033197|Dppa4|73693|developmental pluripotency associated 4	NM_001018002|Dppa4|73693|developmental pluripotency associated 4	NM_028610|Dppa4|73693|developmental pluripotency associated 4	AK010753|Dppa4|73693|developmental pluripotency associated 4	BC064754|Dppa4|73693|developmental pluripotency associated 4	AF490348|Dppa4|73693|developmental pluripotency associated 4
mm9_v1_chr4_-_62180914_62181170	3.1939	FOXD3.p2	BC018236|Alad|17025|aminolevulinate, delta-, dehydratase	AK167673|Alad|17025|aminolevulinate, delta-, dehydratase	AK002300|Alad|17025|aminolevulinate, delta-, dehydratase	AK032908|Alad|17025|aminolevulinate, delta-, dehydratase	AK168119|Alad|17025|aminolevulinate, delta-, dehydratase	AK168132|Alad|17025|aminolevulinate, delta-, dehydratase	BC055930|Alad|17025|aminolevulinate, delta-, dehydratase	NM_008525|Alad|17025|aminolevulinate, delta-, dehydratase
mm9_v1_chr9_+_58100961_58101075	3.193	FOXD3.p2	NM_026942|Stoml1|69106|stomatin-like 1	AK045820|Stoml1|69106|stomatin-like 1	BC017536|Stoml1|69106|stomatin-like 1	BC037074|Stoml1|69106|stomatin-like 1	AK148324|Stoml1|69106|stomatin-like 1
mm9_v1_chr11_+_115626816_115626845	3.18138	FOXD3.p2	BC053088|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr3_+_103811134_103811169	3.17676	FOXD3.p2	
mm9_v1_chr8_+_56040445_56040534	3.17281	FOXD3.p2	BC029683|Gpm6a|234267|glycoprotein m6a	BC033357|Gpm6a|234267|glycoprotein m6a	AK053538|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr2_-_5816330_5816380	3.1701	FOXD3.p2	AF145254|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AF222748|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	BC005458|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK017615|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)	AK136447|Sec61a2|57743|Sec61, alpha subunit 2 (S. cerevisiae)
mm9_v1_chr4_+_102432879_102432915	3.16743	FOXD3.p2	AK043018|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chr2_-_115890747_115890848	3.16291	FOXD3.p2	U68383|Meis2|17536|Meis homeobox 2	U68384|Meis2|17536|Meis homeobox 2	AJ000504|Meis2|17536|Meis homeobox 2	AJ000505|Meis2|17536|Meis homeobox 2	AJ000506|Meis2|17536|Meis homeobox 2	AJ000507|Meis2|17536|Meis homeobox 2	AK146633|Meis2|17536|Meis homeobox 2	NM_001136072|Meis2|17536|Meis homeobox 2	NM_001159567|Meis2|17536|Meis homeobox 2	NM_001159568|Meis2|17536|Meis homeobox 2	NM_010825|Meis2|17536|Meis homeobox 2	BC017375|Meis2|17536|Meis homeobox 2
mm9_v1_chr6_-_128374893_128374941	3.15515	FOXD3.p2	BC025492|Itfg2|101142|integrin alpha FG-GAP repeat containing 2	BC014833|Itfg2|101142|integrin alpha FG-GAP repeat containing 2	NM_133927|Itfg2|101142|integrin alpha FG-GAP repeat containing 2	AK147728|Itfg2|101142|integrin alpha FG-GAP repeat containing 2	AK159637|Itfg2|101142|integrin alpha FG-GAP repeat containing 2
mm9_v1_chr10_-_57252251_57252251	3.15281	FOXD3.p2	AK135359|Serinc1|56442|serine incorporator 1
mm9_v1_chr15_-_75751888_75752008	3.15071	FOXD3.p2	BC026536|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK013214|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK002912|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK012519|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK019237|Pycrl|66194|pyrroline-5-carboxylate reductase-like	AK004291|Pycrl|66194|pyrroline-5-carboxylate reductase-like	NM_025412|Pycrl|66194|pyrroline-5-carboxylate reductase-like
mm9_v1_chr6_-_128374944_128374949	3.14719	FOXD3.p2	AK142721|Itfg2|101142|integrin alpha FG-GAP repeat containing 2	AK134630|Itfg2|101142|integrin alpha FG-GAP repeat containing 2
mm9_v1_chr10_+_81022304_81022369	3.14605	FOXD3.p2	AK158714|Aes|14797|amino-terminal enhancer of split	NM_010347|Aes|14797|amino-terminal enhancer of split	L12140|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr17_-_45797425_45797512	3.13504	FOXD3.p2	AK216465|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr14_-_88871202_88871202	3.13371	FOXD3.p2	AK083114|Pcdh20|219257|protocadherin 20	NM_178685|Pcdh20|219257|protocadherin 20
mm9_v1_chrX_+_80194208_80194241	3.13284	FOXD3.p2	AK052856|Dmd|13405|dystrophin, muscular dystrophy	NM_007868|Dmd|13405|dystrophin, muscular dystrophy	M68859|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr13_-_14705281_14705338	3.1211	FOXD3.p2	AF279255|Mrpl32|75398|mitochondrial ribosomal protein L32	AK078324|Mrpl32|75398|mitochondrial ribosomal protein L32	AK031791|Mrpl32|75398|mitochondrial ribosomal protein L32	AK002753|Mrpl32|75398|mitochondrial ribosomal protein L32	NM_029271|Mrpl32|75398|mitochondrial ribosomal protein L32	AB049650|Mrpl32|75398|mitochondrial ribosomal protein L32	BC052214|Mrpl32|75398|mitochondrial ribosomal protein L32
mm9_v1_chr9_-_15105864_15105946	3.11853	FOXD3.p2	CT010296|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC011540|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC025213|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr1_-_167523348_167523717	3.11709	FOXD3.p2	AK188720|Mpzl1|68481|myelin protein zero-like 1	AK198363|Mpzl1|68481|myelin protein zero-like 1	AK200888|Mpzl1|68481|myelin protein zero-like 1	AK206772|Mpzl1|68481|myelin protein zero-like 1	AK210071|Mpzl1|68481|myelin protein zero-like 1	AK214871|Mpzl1|68481|myelin protein zero-like 1	AK215062|Mpzl1|68481|myelin protein zero-like 1	AK218959|Mpzl1|68481|myelin protein zero-like 1	AK003513|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr1_+_91351435_91351522	3.11616	FOXD3.p2	BC096588|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr17_+_46848407_46848441	3.11116	FOXD3.p2	BC003424|Pex6|224824|peroxisomal biogenesis factor 6	NM_145488|Pex6|224824|peroxisomal biogenesis factor 6	AK083898|Pex6|224824|peroxisomal biogenesis factor 6	AK143173|Pex6|224824|peroxisomal biogenesis factor 6	AK030565|Pex6|224824|peroxisomal biogenesis factor 6	AK220525|Pex6|224824|peroxisomal biogenesis factor 6
mm9_v1_chrX_+_140100287_140100287	3.10625	FOXD3.p2	NM_001195049|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	U39738|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr1_-_59218396_59218479	3.10561	FOXD3.p2	BC061694|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	BC058776|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	AK044600|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	NM_145143|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
mm9_v1_chr2_-_20889276_20889347	3.1048	FOXD3.p2	BC150741|Arhgap21|71435|Rho GTPase activating protein 21	BC076629|Arhgap21|71435|Rho GTPase activating protein 21	NM_001081364|Arhgap21|71435|Rho GTPase activating protein 21	NM_001128084|Arhgap21|71435|Rho GTPase activating protein 21
mm9_v1_chr14_-_37748753_37748753	3.10453	FOXD3.p2	AK005931|Gcap14|72972|granule cell antiserum positive 14	BC048641|Gcap14|72972|granule cell antiserum positive 14	BC060947|Gcap14|72972|granule cell antiserum positive 14	NM_028407|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr7_+_52810297_52810297	3.09699	FOXD3.p2	NM_025330|Hsd17b14|66065|hydroxysteroid (17-beta) dehydrogenase 14
mm9_v1_chr15_-_76853069_76853216	3.09286	FOXD3.p2	AK137456|Mb|17189|myoglobin	NM_001164048|Mb|17189|myoglobin	NM_001164047|Mb|17189|myoglobin
mm9_v1_chr11_-_60166321_60166401	3.08867	FOXD3.p2	BC062947|Tom1l2|216810|target of myb1-like 2 (chicken)	BC127266|Tom1l2|216810|target of myb1-like 2 (chicken)	AK054531|Tom1l2|216810|target of myb1-like 2 (chicken)	AK036788|Tom1l2|216810|target of myb1-like 2 (chicken)	AF467887|Tom1l2|216810|target of myb1-like 2 (chicken)	AK043095|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr2_+_28061156_28061215	3.08285	FOXD3.p2	D78262|Olfm1|56177|olfactomedin 1	D78263|Olfm1|56177|olfactomedin 1	NM_001038612|Olfm1|56177|olfactomedin 1	NM_019498|Olfm1|56177|olfactomedin 1
mm9_v1_chr18_+_23910833_23910892	3.08275	FOXD3.p2	AK158570|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	NM_001162942|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK168834|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr15_-_54109855_54110038	3.07791	FOXD3.p2	BC049782|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK140244|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	U94331|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AK146105|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	AB013898|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)	NM_008764|Tnfrsf11b|18383|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm9_v1_chr16_+_37884098_37884244	3.07151	FOXD3.p2	AK052834|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr18_+_37644674_37644812	3.06966	FOXD3.p2	BC017149|Pcdhb17|93888|protocadherin beta 17	NM_053142|Pcdhb17|93888|protocadherin beta 17	AK077255|Pcdhb17|93888|protocadherin beta 17	AF326310|Pcdhb17|93888|protocadherin beta 17	AY013778|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chr10_-_80945445_80945464	3.06928	FOXD3.p2	NM_176954|Celf5|319586|CUGBP, Elav-like family member 5
mm9_v1_chr6_+_91828040_91828112	3.06401	FOXD3.p2	NM_172730|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	BC051147|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK170727|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK156259|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK081505|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK039818|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK155581|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK170492|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	BC038871|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene	AK051852|C130022K22Rik|232236|RIKEN cDNA C130022K22 gene
mm9_v1_chr5_-_124804583_124804698	3.06045	FOXD3.p2	BC083075|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	NM_013812|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	AK004852|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr1_+_173144142_173144169	3.05355	FOXD3.p2	AK149381|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	BC089541|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	AF009327|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr1_+_63492447_63492511	3.05212	FOXD3.p2	AK046677|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_001177600|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_011780|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK034022|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK083458|Adam23|23792|a disintegrin and metallopeptidase domain 23
mm9_v1_chr5_+_130845319_130845359	3.05048	FOXD3.p2	NM_181045|Caln1|140904|calneuron 1	AF282251|Caln1|140904|calneuron 1	AK035865|Caln1|140904|calneuron 1
mm9_v1_chr6_-_126658429_126658452	3.04801	FOXD3.p2	
mm9_v1_chr10_-_115910911_115910982	3.04699	FOXD3.p2	AK013647|Kcnmb4|58802|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm9_v1_chr5_-_110698874_110698881	3.04621	FOXD3.p2	AK049246|Pgam5|72542|phosphoglycerate mutase family member 5	AK169643|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr5_+_118426774_118426787	3.03931	FOXD3.p2	AK049723|Fbxo21|231670|F-box protein 21	NM_145564|Fbxo21|231670|F-box protein 21	AK076521|Fbxo21|231670|F-box protein 21
mm9_v1_chr5_-_118605455_118605474	3.03866	FOXD3.p2	AK031815|Fbxw8|231672|F-box and WD-40 domain protein 8	AK053794|Fbxw8|231672|F-box and WD-40 domain protein 8	NM_172721|Fbxw8|231672|F-box and WD-40 domain protein 8	AK134291|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chr10_-_127617294_127617366	3.03763	FOXD3.p2	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr11_+_93905557_93905590	3.03759	FOXD3.p2	BC052058|Spag9|70834|sperm associated antigen 9	BC060100|Spag9|70834|sperm associated antigen 9	BC094670|Spag9|70834|sperm associated antigen 9
mm9_v1_chr10_-_116675736_116675742	3.03365	FOXD3.p2	NM_029906|9530003J23Rik|77397|RIKEN cDNA 9530003J23 gene
mm9_v1_chr1_+_91351373_91351428	3.02532	FOXD3.p2	AK147503|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037136|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_178119|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK046523|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK129289|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr17_-_23908488_23908570	3.02118	FOXD3.p2	AK168389|Flywch1|224613|FLYWCH-type zinc finger 1	NM_153791|Flywch1|224613|FLYWCH-type zinc finger 1
mm9_v1_chrX_+_34971918_34972062	3.01209	FOXD3.p2	AJ972669|Rhox4e|194856|reproductive homeobox 4E	NM_201236|Rhox4e|194856|reproductive homeobox 4E	BC094891|Rhox4e|194856|reproductive homeobox 4E	BC172128|Rhox4e|194856|reproductive homeobox 4E
mm9_v1_chr4_-_127006368_127006404	3.01145	FOXD3.p2	NM_008126|Gjb3|14620|gap junction protein, beta 3	X63099|Gjb3|14620|gap junction protein, beta 3
mm9_v1_chr9_+_53109774_53109787	3.01091	FOXD3.p2	AB098163|Exph5|320051|exophilin 5	NM_176846|Exph5|320051|exophilin 5	BC120905|Exph5|320051|exophilin 5
mm9_v1_chr2_+_109516053_109516053	3.00878	FOXD3.p2	AY057909|Bdnf|12064|brain derived neurotrophic factor	AY057910|Bdnf|12064|brain derived neurotrophic factor	AY057911|Bdnf|12064|brain derived neurotrophic factor	EF125670|Bdnf|12064|brain derived neurotrophic factor	EF125671|Bdnf|12064|brain derived neurotrophic factor	EF125672|Bdnf|12064|brain derived neurotrophic factor	NM_001048139|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr2_-_155984800_155984951	3.00311	FOXD3.p2	AK134091|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr1_-_163181313_163181346	3.00152	FOXD3.p2	AK157820|Prdx6|11758|peroxiredoxin 6	Y12883|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr10_-_60294129_60294365	2.99479	FOXD3.p2	BC048162|Unc5b|107449|unc-5 homolog B (C. elegans)	BC057560|Unc5b|107449|unc-5 homolog B (C. elegans)	AJ487853|Unc5b|107449|unc-5 homolog B (C. elegans)	AK170513|Unc5b|107449|unc-5 homolog B (C. elegans)	AK154287|Unc5b|107449|unc-5 homolog B (C. elegans)	AK158284|Unc5b|107449|unc-5 homolog B (C. elegans)	AK018177|Unc5b|107449|unc-5 homolog B (C. elegans)	AK154271|Unc5b|107449|unc-5 homolog B (C. elegans)	NM_029770|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chr3_-_59024076_59024180	2.98782	FOXD3.p2	AK014807|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr13_-_101500801_101500875	2.98212	FOXD3.p2	AK145759|Cdk7|12572|cyclin-dependent kinase 7	U11822|Cdk7|12572|cyclin-dependent kinase 7	BC141043|Cdk7|12572|cyclin-dependent kinase 7	BC004605|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr2_+_35413977_35414092	2.97485	FOXD3.p2	NM_001114125|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	DQ473307|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr4_-_40886191_40886208	2.97355	FOXD3.p2	AK188292|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr3_-_80606704_80606756	2.9723	FOXD3.p2	AK163941|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK046861|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001039195|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_001083806|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	NM_013540|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	AK014389|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr5_-_113739711_113739807	2.97177	FOXD3.p2	BC138049|Sgsm1|52850|small G protein signaling modulator 1	BC138050|Sgsm1|52850|small G protein signaling modulator 1	AK053555|Sgsm1|52850|small G protein signaling modulator 1	AK044716|Sgsm1|52850|small G protein signaling modulator 1	AK170021|Sgsm1|52850|small G protein signaling modulator 1	NM_001162965|Sgsm1|52850|small G protein signaling modulator 1	NM_172718|Sgsm1|52850|small G protein signaling modulator 1
mm9_v1_chr18_+_37112301_37112419	2.96518	FOXD3.p2	AK149282|Pcdha4|12936|protocadherin alpha 4	AK048980|Pcdha4|12936|protocadherin alpha 4	BC060211|Pcdha4|12936|protocadherin alpha 4	D86916|Pcdha4|12936|protocadherin alpha 4	NM_007766|Pcdha4|12936|protocadherin alpha 4	AF464180|Pcdha4-g|100384868|protocadherin alpha 4-gamma	NM_001174154|Pcdha4-g|100384868|protocadherin alpha 4-gamma	AY013762|Pcdha4|12936|protocadherin alpha 4
mm9_v1_chr1_+_171585621_171585677	2.96461	FOXD3.p2	AK004165|Rgs5|19737|regulator of G-protein signaling 5	AK028765|Rgs5|19737|regulator of G-protein signaling 5	AK030300|Rgs5|19737|regulator of G-protein signaling 5	AK044096|Rgs5|19737|regulator of G-protein signaling 5	AK054098|Rgs5|19737|regulator of G-protein signaling 5	NM_009063|Rgs5|19737|regulator of G-protein signaling 5	BC037683|Rgs5|19737|regulator of G-protein signaling 5	U67188|Rgs5|19737|regulator of G-protein signaling 5
mm9_v1_chrX_+_70437517_70437560	2.94908	FOXD3.p2	NM_001081643|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC057003|Xlr3b|574437|X-linked lymphocyte-regulated 3B	AK146398|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC038862|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC064787|Xlr3b|574437|X-linked lymphocyte-regulated 3B
mm9_v1_chr7_-_53435334_53435402	2.94293	FOXD3.p2	BC141411|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AK086472|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	NM_011510|Abcc8|20927|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
mm9_v1_chr11_+_56825258_56825293	2.94288	FOXD3.p2	X57497|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr19_-_8797689_8797858	2.93862	FOXD3.p2	AK161280|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	NM_001161413|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr11_+_51577152_51577250	2.93315	FOXD3.p2	NM_025535|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK002327|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK155429|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC082550|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK150906|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC085178|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK013559|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)
mm9_v1_chrX_-_91457986_91458033	2.9329	FOXD3.p2	AK128949|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK171317|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC063755|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139234|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139235|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	NM_012010|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK165866|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK150095|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK146900|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm9_v1_chr7_-_52636246_52636362	2.92771	FOXD3.p2	BC058513|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)
mm9_v1_chr1_-_54495779_54495827	2.92496	FOXD3.p2	AK160997|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	BC141157|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	AK145040|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	AK165830|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	NM_001033194|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3
mm9_v1_chr5_+_143734622_143734709	2.92174	FOXD3.p2	
mm9_v1_chr14_-_21437545_21437583	2.92165	FOXD3.p2	AK047620|Usp54|78787|ubiquitin specific peptidase 54	NM_030180|Usp54|78787|ubiquitin specific peptidase 54
mm9_v1_chr3_+_62142698_62142868	2.91988	FOXD3.p2	NM_001081295|Arhgef26|622434|Rho guanine nucleotide exchange factor (GEF) 26
mm9_v1_chr18_-_39026347_39026400	2.91956	FOXD3.p2	BC027001|Fgf1|14164|fibroblast growth factor 1	BC037601|Fgf1|14164|fibroblast growth factor 1	AF012926|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr8_+_73053432_73053453	2.91954	FOXD3.p2	AB154247|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chrX_-_73120447_73120456	2.91527	FOXD3.p2	AK160501|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr3_-_146444377_146444386	2.91089	FOXD3.p2	AK150122|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK150134|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164200|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr1_-_38954933_38955026	2.90054	FOXD3.p2	BC056956|Chst10|98388|carbohydrate sulfotransferase 10	AK047378|Chst10|98388|carbohydrate sulfotransferase 10	NM_145142|Chst10|98388|carbohydrate sulfotransferase 10	AK050676|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chrY_+_155091_155155	2.89743	FOXD3.p2	AF150963|Ube1y1|22202|ubiquitin-activating enzyme E1, Chr Y 1	AK030031|Ube1y1|22202|ubiquitin-activating enzyme E1, Chr Y 1	NM_011667|Ube1y1|22202|ubiquitin-activating enzyme E1, Chr Y 1
mm9_v1_chr19_+_26681759_26681957	2.89454	FOXD3.p2	AK147322|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr11_+_114529837_114529938	2.87103	FOXD3.p2	AB037665|Rpl38|67671|ribosomal protein L38	NM_001048057|Rpl38|67671|ribosomal protein L38	NM_023372|Rpl38|67671|ribosomal protein L38	AK002659|Rpl38|67671|ribosomal protein L38	AK010518|Rpl38|67671|ribosomal protein L38	AK012391|Rpl38|67671|ribosomal protein L38	BC055346|Rpl38|67671|ribosomal protein L38	BC034339|Rpl38|67671|ribosomal protein L38	AK010277|Rpl38|67671|ribosomal protein L38	AK151517|Rpl38|67671|ribosomal protein L38	BC047046|Rpl38|67671|ribosomal protein L38
mm9_v1_chr14_+_120724163_120724175	2.86726	FOXD3.p2	BC075665|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr2_-_174092557_174092559	2.86717	FOXD3.p2	
mm9_v1_chr13_-_74346106_74346168	2.86704	FOXD3.p2	AK012940|Exoc3|211446|exocyst complex component 3	AK131141|Exoc3|211446|exocyst complex component 3	BC031743|Exoc3|211446|exocyst complex component 3	AK088333|Exoc3|211446|exocyst complex component 3	AK141537|Exoc3|211446|exocyst complex component 3	NM_177333|Exoc3|211446|exocyst complex component 3	AK089979|Exoc3|211446|exocyst complex component 3
mm9_v1_chr10_+_90292388_90292441	2.8597	FOXD3.p2	AK032061|Anks1b|77531|ankyrin repeat and sterile alpha motif domain containing 1B
mm9_v1_chr12_-_89512940_89512943	2.85772	FOXD3.p2	AK049201|Gm5662|435337|predicted gene 5662	NM_001013824|Gm5662|435337|predicted gene 5662	AK146341|Gm5662|435337|predicted gene 5662
mm9_v1_chr9_-_18190355_18190479	2.854	FOXD3.p2	BC108995|Naalad2|72560|N-acetylated alpha-linked acidic dipeptidase 2	BC108996|Naalad2|72560|N-acetylated alpha-linked acidic dipeptidase 2	AY243507|Naalad2|72560|N-acetylated alpha-linked acidic dipeptidase 2	NM_028279|Naalad2|72560|N-acetylated alpha-linked acidic dipeptidase 2	AK133611|Naalad2|72560|N-acetylated alpha-linked acidic dipeptidase 2
mm9_v1_chr11_+_54716354_54716435	2.8518	FOXD3.p2	NM_001083929|Gpx3|14778|glutathione peroxidase 3	AK002219|Gpx3|14778|glutathione peroxidase 3	AK002262|Gpx3|14778|glutathione peroxidase 3	AK004942|Gpx3|14778|glutathione peroxidase 3	NM_008161|Gpx3|14778|glutathione peroxidase 3	AK146760|Gpx3|14778|glutathione peroxidase 3	BC037027|Gpx3|14778|glutathione peroxidase 3
mm9_v1_chr2_-_57905140_57905276	2.8483	FOXD3.p2	DQ334270|Ermn|77767|ermin, ERM-like protein	BC089515|Ermn|77767|ermin, ERM-like protein	NM_029972|Ermn|77767|ermin, ERM-like protein	BC090670|Ermn|77767|ermin, ERM-like protein	AK078089|Ermn|77767|ermin, ERM-like protein	AK136820|Ermn|77767|ermin, ERM-like protein	AK137305|Ermn|77767|ermin, ERM-like protein	AK020733|Ermn|77767|ermin, ERM-like protein	AK220372|Ermn|77767|ermin, ERM-like protein
mm9_v1_chr11_+_31900378_31900504	2.84561	FOXD3.p2	AK088499|Nsg2|18197|neuron specific gene family member 2	NM_008741|Nsg2|18197|neuron specific gene family member 2	U17259|Nsg2|18197|neuron specific gene family member 2	AK049679|Nsg2|18197|neuron specific gene family member 2	AK075612|Nsg2|18197|neuron specific gene family member 2	AK160712|Nsg2|18197|neuron specific gene family member 2	BC018224|Nsg2|18197|neuron specific gene family member 2	AK041338|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr11_+_22913386_22913386	2.8367	FOXD3.p2	BC026495|Fam161a|73873|family with sequence similarity 161, member A	NM_028672|Fam161a|73873|family with sequence similarity 161, member A
mm9_v1_chr6_-_101327849_101327941	2.8367	FOXD3.p2	AK173098|Pdzrn3|55983|PDZ domain containing RING finger 3	HM560981|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127084|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127085|Pdzrn3|55983|PDZ domain containing RING finger 3	NM_018884|Pdzrn3|55983|PDZ domain containing RING finger 3
mm9_v1_chr17_-_65929913_65929945	2.83628	FOXD3.p2	
mm9_v1_chr6_+_146991282_146991325	2.8344	FOXD3.p2	AK077677|Mrps35|232536|mitochondrial ribosomal protein S35	NM_145573|Mrps35|232536|mitochondrial ribosomal protein S35	AK170480|Mrps35|232536|mitochondrial ribosomal protein S35	BC019964|Mrps35|232536|mitochondrial ribosomal protein S35
mm9_v1_chrX_-_133278223_133278228	2.83122	FOXD3.p2	AK161610|Morf4l2|56397|mortality factor 4 like 2	AK166637|Morf4l2|56397|mortality factor 4 like 2	NM_001168228|Morf4l2|56397|mortality factor 4 like 2	NM_001168230|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr13_-_98786061_98786107	2.82445	FOXD3.p2	AK048676|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr3_+_129584101_129584101	2.81313	FOXD3.p2	AY007382|Pla2g12a|66350|phospholipase A2, group XIIA	NM_183423|Pla2g12a|66350|phospholipase A2, group XIIA
mm9_v1_chr9_-_113935832_113935880	2.80917	FOXD3.p2	AK013142|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK089994|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145665|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145998|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK045742|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC096582|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK141177|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK163472|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK044693|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK039010|Fbxl2|72179|F-box and leucine-rich repeat protein 2	NM_178624|Fbxl2|72179|F-box and leucine-rich repeat protein 2
mm9_v1_chr16_-_85173851_85173917	2.80531	FOXD3.p2	X59379|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr6_-_38077491_38077509	2.8022	FOXD3.p2	BC059853|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene	BC042666|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr16_+_17331463_17331501	2.79825	FOXD3.p2	NM_008223|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr3_-_86724773_86724792	2.79372	FOXD3.p2	BC056921|Dclk2|70762|doublecortin-like kinase 2
mm9_v1_chr5_+_72091188_72091254	2.7904	FOXD3.p2	BC157920|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	BC130258|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	NM_008069|Gabrb1|14400|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm9_v1_chr18_-_64648683_64648745	2.77992	FOXD3.p2	AK083560|Fech|14151|ferrochelatase	BC094548|Fech|14151|ferrochelatase	M61215|Fech|14151|ferrochelatase	AK004718|Fech|14151|ferrochelatase	NM_007998|Fech|14151|ferrochelatase	AK018738|Fech|14151|ferrochelatase	AK150685|Fech|14151|ferrochelatase
mm9_v1_chr12_-_46175433_46175475	2.77983	FOXD3.p2	NM_144552|Stxbp6|217517|syntaxin binding protein 6 (amisyn)
mm9_v1_chr3_+_98186380_98186408	2.77437	FOXD3.p2	AK034880|Zfp697|242109|zinc finger protein 697	AK086791|Zfp697|242109|zinc finger protein 697	NM_172863|Zfp697|242109|zinc finger protein 697
mm9_v1_chr2_-_156817751_156817861	2.77323	FOXD3.p2	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr12_-_113749363_113749407	2.76863	FOXD3.p2	AK047810|Tmem179|104885|transmembrane protein 179	NM_178915|Tmem179|104885|transmembrane protein 179	BC046482|Tmem179|104885|transmembrane protein 179	AK090230|Tmem179|104885|transmembrane protein 179
mm9_v1_chr10_+_127526038_127526102	2.76565	FOXD3.p2	BC018392|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK183981|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198015|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198554|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK200200|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK205830|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212143|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK178407|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK182340|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK189215|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK190147|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK191197|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK192149|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198620|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK202885|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK215685|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216714|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217489|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK195031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK196936|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198338|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr8_-_81345034_81345050	2.76522	FOXD3.p2	AK158236|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_001191004|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_030145|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr13_-_60278447_60278547	2.76148	FOXD3.p2	BC055747|Gas1|14451|growth arrest specific 1
mm9_v1_chr14_+_55506625_55506792	2.7505	FOXD3.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr12_+_118754951_118754998	2.74503	FOXD3.p2	AK029995|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5	NM_175930|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5	AK030016|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr8_-_81344956_81345026	2.74303	FOXD3.p2	BC099484|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC098230|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC030427|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK141884|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK078392|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK161686|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK019126|Lsm6|78651|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr14_-_31736727_31736772	2.74243	FOXD3.p2	X70393|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	BC015276|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	AK146700|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	NM_008407|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3
mm9_v1_chr5_-_110698902_110698941	2.74076	FOXD3.p2	AK146216|Pgam5|72542|phosphoglycerate mutase family member 5	NM_001163538|Pgam5|72542|phosphoglycerate mutase family member 5	NM_028273|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr4_-_60594496_60594530	2.74054	FOXD3.p2	M27609|Mup1|17840|major urinary protein 1	X03524|Mup1|17840|major urinary protein 1
mm9_v1_chr4_+_102432943_102433069	2.71743	FOXD3.p2	AK032439|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	AK148302|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	BC017596|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	NM_144906|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1	AK014022|Sgip1|73094|SH3-domain GRB2-like (endophilin) interacting protein 1
mm9_v1_chr6_-_11857343_11857431	2.71293	FOXD3.p2	U59509|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4	BC011114|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4	AK154084|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4
mm9_v1_chr7_-_11896030_11896030	2.71248	FOXD3.p2	NM_001161802|Zscan4e|665848|zinc finger and SCAN domain containing 4E
mm9_v1_chr3_+_136333793_136333805	2.70843	FOXD3.p2	BC096652|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr8_+_90668448_90668453	2.7054	FOXD3.p2	BC030373|Heatr3|234549|HEAT repeat containing 3
mm9_v1_chr14_-_122097583_122097657	2.69683	FOXD3.p2	BC157964|Dock9|105445|dedicator of cytokinesis 9	NM_001081039|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr5_-_143668369_143668395	2.69568	FOXD3.p2	BC138611|Actb|11461|actin, beta	BC138614|Actb|11461|actin, beta	AK179836|Actb|11461|actin, beta	AK180740|Actb|11461|actin, beta	AK180898|Actb|11461|actin, beta	AK184086|Actb|11461|actin, beta	AK184228|Actb|11461|actin, beta	AK187727|Actb|11461|actin, beta	J04181|Actb|11461|actin, beta
mm9_v1_chr7_+_133960398_133960398	2.6933	FOXD3.p2	NM_026884|Fam57b|68952|family with sequence similarity 57, member B
mm9_v1_chr15_-_79158526_79158679	2.68991	FOXD3.p2	BC049778|Pla2g6|53357|phospholipase A2, group VI	BC003487|Pla2g6|53357|phospholipase A2, group VI	AK153333|Pla2g6|53357|phospholipase A2, group VI	BC052845|Pla2g6|53357|phospholipase A2, group VI	AK144495|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr10_-_87937335_87937390	2.68605	FOXD3.p2	AK080245|Chpt1|212862|choline phosphotransferase 1
mm9_v1_chr1_-_24012436_24012480	2.68506	FOXD3.p2	AK003789|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	BC028981|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK004301|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK007909|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK015824|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	NM_026503|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene
mm9_v1_chr11_+_89894863_89894903	2.68205	FOXD3.p2	BC034841|Tmem100|67888|transmembrane protein 100
mm9_v1_chr18_-_20273110_20273273	2.67854	FOXD3.p2	BC109161|Dsc1|13505|desmocollin 1	BC109162|Dsc1|13505|desmocollin 1	AK036893|Dsc1|13505|desmocollin 1	AK081826|Dsc1|13505|desmocollin 1	X97986|Dsc1|13505|desmocollin 1	AK079441|Dsc1|13505|desmocollin 1	NM_013504|Dsc1|13505|desmocollin 1
mm9_v1_chr18_+_23468655_23468725	2.67694	FOXD3.p2	X95227|Dtna|13527|dystrobrevin alpha
mm9_v1_chr13_-_29043539_29043562	2.6743	FOXD3.p2	AK031394|Sox4|20677|SRY-box containing gene 4	AK153771|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr7_-_19751441_19751475	2.67144	FOXD3.p2	AK050472|Gipr|381853|gastric inhibitory polypeptide receptor	AK146552|Gipr|381853|gastric inhibitory polypeptide receptor	NM_001080815|Gipr|381853|gastric inhibitory polypeptide receptor
mm9_v1_chr18_+_37164856_37165092	2.66727	FOXD3.p2	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr3_-_36589048_36589088	2.66373	FOXD3.p2	AK082063|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK080619|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK032317|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	NM_019510|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3
mm9_v1_chr5_+_90893032_90893045	2.65634	FOXD3.p2	M16111|Alb|11657|albumin
mm9_v1_chr18_+_69505374_69505487	2.65143	FOXD3.p2	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr2_-_112870487_112870487	2.65047	FOXD3.p2	NM_177652|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr3_-_65940346_65940359	2.64834	FOXD3.p2	AB085189|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	AK013398|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_028357|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)
mm9_v1_chrX_+_9829439_9829558	2.64631	FOXD3.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chr8_-_13200534_13200625	2.64098	FOXD3.p2	AK017251|Grtp1|66790|GH regulated TBC protein 1	AK017197|Grtp1|66790|GH regulated TBC protein 1	AK044437|Grtp1|66790|GH regulated TBC protein 1	AK082863|Grtp1|66790|GH regulated TBC protein 1	AK149322|Grtp1|66790|GH regulated TBC protein 1	NM_025768|Grtp1|66790|GH regulated TBC protein 1	AK007905|Grtp1|66790|GH regulated TBC protein 1
mm9_v1_chr17_-_25981402_25981452	2.63518	FOXD3.p2	AK142183|Rhot2|214952|ras homolog gene family, member T2	BC029777|Rhot2|214952|ras homolog gene family, member T2	BC034062|Rhot2|214952|ras homolog gene family, member T2
mm9_v1_chr10_+_69488049_69488073	2.63511	FOXD3.p2	AK013684|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr6_-_11857434_11857486	2.63333	FOXD3.p2	AK008506|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4	AK008357|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4	AK076036|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4	NM_010886|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4	AK005084|Ndufa4|17992|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4
mm9_v1_chr2_+_76244578_76244594	2.62589	FOXD3.p2	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr6_-_39327637_39327722	2.62334	FOXD3.p2	BC099673|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK076213|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK077836|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK167716|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	BC005744|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK145242|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	NM_028123|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm9_v1_chrX_-_133275812_133275890	2.62057	FOXD3.p2	AK089963|Morf4l2|56397|mortality factor 4 like 2	AK153146|Morf4l2|56397|mortality factor 4 like 2	AK075946|Morf4l2|56397|mortality factor 4 like 2	AK131944|Morf4l2|56397|mortality factor 4 like 2	AK145686|Morf4l2|56397|mortality factor 4 like 2	AK150401|Morf4l2|56397|mortality factor 4 like 2	AK150670|Morf4l2|56397|mortality factor 4 like 2	AK151570|Morf4l2|56397|mortality factor 4 like 2	AK159179|Morf4l2|56397|mortality factor 4 like 2	AK160012|Morf4l2|56397|mortality factor 4 like 2	AK164433|Morf4l2|56397|mortality factor 4 like 2	AK165985|Morf4l2|56397|mortality factor 4 like 2	AK159145|Morf4l2|56397|mortality factor 4 like 2	NM_001168226|Morf4l2|56397|mortality factor 4 like 2	NM_001168229|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr11_-_3429909_3429923	2.61988	FOXD3.p2	AK160492|Smtn|29856|smoothelin
mm9_v1_chr17_-_24670527_24670832	2.61734	FOXD3.p2	AB232621|Rab26|328778|RAB26, member RAS oncogene family	BC094931|Rab26|328778|RAB26, member RAS oncogene family	AK043912|Rab26|328778|RAB26, member RAS oncogene family	AK080607|Rab26|328778|RAB26, member RAS oncogene family	NM_177375|Rab26|328778|RAB26, member RAS oncogene family	BC118018|Rab26|328778|RAB26, member RAS oncogene family
mm9_v1_chr15_-_98783909_98783984	2.6169	FOXD3.p2	M13445|Tuba1a|22142|tubulin, alpha 1A	NM_011653|Tuba1a|22142|tubulin, alpha 1A	AK077529|Tuba1a|22142|tubulin, alpha 1A	BC056169|Tuba1a|22142|tubulin, alpha 1A	BC083344|Tuba1a|22142|tubulin, alpha 1A	BC083343|Tuba1a|22142|tubulin, alpha 1A	BC085256|Tuba1a|22142|tubulin, alpha 1A	BC083345|Tuba1a|22142|tubulin, alpha 1A	AK145404|Tuba1a|22142|tubulin, alpha 1A	AK146983|Tuba1a|22142|tubulin, alpha 1A	AK167687|Tuba1a|22142|tubulin, alpha 1A	AK168762|Tuba1a|22142|tubulin, alpha 1A	AK169610|Tuba1a|22142|tubulin, alpha 1A	AK164335|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chrX_-_73120485_73120524	2.61629	FOXD3.p2	AK165540|Pls3|102866|plastin 3 (T-isoform)	NM_001166453|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr11_+_119961534_119961626	2.60975	FOXD3.p2	
mm9_v1_chr7_-_11490398_11490398	2.6093	FOXD3.p2	NM_001185173|Zscan4b|665780|zinc finger and SCAN domain containing 4B
mm9_v1_chr15_+_76157816_76157892	2.60916	FOXD3.p2	AK089890|Exosc4|109075|exosome component 4	NM_175399|Exosc4|109075|exosome component 4	AK167629|Exosc4|109075|exosome component 4	AK083308|Exosc4|109075|exosome component 4	BC012277|Exosc4|109075|exosome component 4
mm9_v1_chr5_-_124804538_124804560	2.609	FOXD3.p2	BC103772|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr5_+_113919352_113919613	2.60424	FOXD3.p2	BC096526|Wscd2|320916|WSC domain containing 2	NM_177292|Wscd2|320916|WSC domain containing 2
mm9_v1_chr1_-_72258684_72258880	2.60122	FOXD3.p2	AY628210|Mreg|381269|melanoregulin	BC068125|Mreg|381269|melanoregulin	NM_001005423|Mreg|381269|melanoregulin
mm9_v1_chr1_+_78654399_78654472	2.60092	FOXD3.p2	AK161708|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001001981|Utp14b|195434|UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	NM_001033606|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_001136222|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	NM_028817|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK012088|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK160839|Acsl3|74205|acyl-CoA synthetase long-chain family member 3	AK166723|Acsl3|74205|acyl-CoA synthetase long-chain family member 3
mm9_v1_chr11_+_22872016_22872058	2.59917	FOXD3.p2	NM_011663|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	D17407|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	S69507|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm9_v1_chr1_+_7162595_7162622	2.59814	FOXD3.p2	AK018402|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr17_+_64287320_64287320	2.59792	FOXD3.p2	M32054|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2	NM_008000|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2
mm9_v1_chr3_-_146433544_146433656	2.59776	FOXD3.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr14_+_30781514_30781692	2.59689	FOXD3.p2	NM_019979|Selk|80795|selenoprotein K	AK008419|Selk|80795|selenoprotein K	BC038049|Selk|80795|selenoprotein K	AK003206|Selk|80795|selenoprotein K	BC096677|Selk|80795|selenoprotein K	AK007523|Selk|80795|selenoprotein K	AK006674|Selk|80795|selenoprotein K	BC096044|Selk|80795|selenoprotein K
mm9_v1_chr11_+_51085400_51085500	2.58774	FOXD3.p2	AF005423|Clk4|12750|CDC like kinase 4	AK161739|Clk4|12750|CDC like kinase 4
mm9_v1_chr5_+_118426721_118426771	2.58584	FOXD3.p2	BC021871|Fbxo21|231670|F-box protein 21
mm9_v1_chr18_+_37120093_37120209	2.58526	FOXD3.p2	AY013763|Pcdha5|12941|protocadherin alpha 5	NM_009959|Pcdha5|12941|protocadherin alpha 5	AB008181|Pcdha5|12941|protocadherin alpha 5
mm9_v1_chr12_-_42212337_42212337	2.58195	FOXD3.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr19_-_20802015_20802054	2.58055	FOXD3.p2	BC046315|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC032880|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139412|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139413|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	NM_011921|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	U96401|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7
mm9_v1_chr1_-_93829376_93829378	2.57212	FOXD3.p2	AK170461|Hdac4|208727|histone deacetylase 4
mm9_v1_chr14_-_104243474_104243491	2.5719	FOXD3.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr15_+_36103785_36103843	2.56998	FOXD3.p2	AK003023|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK018914|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK008136|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	AK008287|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	BC028543|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	S63758|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K
mm9_v1_chr3_+_55265811_55265928	2.56973	FOXD3.p2	AF155821|Dclk1|13175|doublecortin-like kinase 1	AK032424|Dclk1|13175|doublecortin-like kinase 1	AK081200|Dclk1|13175|doublecortin-like kinase 1	AB073969|Dclk1|13175|doublecortin-like kinase 1	AK047716|Dclk1|13175|doublecortin-like kinase 1	AY968047|Dclk1|13175|doublecortin-like kinase 1	AY968048|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr11_-_11927973_11927973	2.56935	FOXD3.p2	BC016111|Grb10|14783|growth factor receptor bound protein 10	NM_001177629|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr4_-_108311676_108311740	2.56889	FOXD3.p2	
mm9_v1_chr6_+_139789965_139790178	2.55967	FOXD3.p2	AB008792|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	NM_011084|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054415|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054271|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054266|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	BC061142|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm9_v1_chr1_+_174078297_174078312	2.55034	FOXD3.p2	BC078641|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr8_-_47209499_47209499	2.5472	FOXD3.p2	NM_207213|Snx25|102141|sorting nexin 25
mm9_v1_chr16_-_5013596_5013670	2.54698	FOXD3.p2	AK046477|Rogdi|66049|rogdi homolog (Drosophila)	AK170144|Rogdi|66049|rogdi homolog (Drosophila)	AY036117|Rogdi|66049|rogdi homolog (Drosophila)	BC006914|Rogdi|66049|rogdi homolog (Drosophila)	AK002523|Rogdi|66049|rogdi homolog (Drosophila)	NM_133185|Rogdi|66049|rogdi homolog (Drosophila)
mm9_v1_chr5_-_49280703_49280795	2.5463	FOXD3.p2	AF453243|Kcnip4|80334|Kv channel interacting protein 4	AK165773|Kcnip4|80334|Kv channel interacting protein 4	AK049662|Kcnip4|80334|Kv channel interacting protein 4	DQ148503|Kcnip4|80334|Kv channel interacting protein 4	AK039048|Kcnip4|80334|Kv channel interacting protein 4	NM_030265|Kcnip4|80334|Kv channel interacting protein 4
mm9_v1_chr18_+_37890662_37890807	2.54024	FOXD3.p2	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr1_+_133737686_133737717	2.54017	FOXD3.p2	BC037033|Slc41a1|98396|solute carrier family 41, member 1
mm9_v1_chr11_+_30785357_30785392	2.53388	FOXD3.p2	AK141614|Gpr75|237716|G protein-coupled receptor 75
mm9_v1_chr11_+_54716439_54716452	2.52789	FOXD3.p2	BC037134|Gpx3|14778|glutathione peroxidase 3	BC049235|Gpx3|14778|glutathione peroxidase 3	BC003339|Gpx3|14778|glutathione peroxidase 3	BC061950|Gpx3|14778|glutathione peroxidase 3	U13705|Gpx3|14778|glutathione peroxidase 3
mm9_v1_chr10_+_14480024_14480094	2.52439	FOXD3.p2	BC144884|Nmbr|18101|neuromedin B receptor	BC144885|Nmbr|18101|neuromedin B receptor	BC119237|Nmbr|18101|neuromedin B receptor	NM_008703|Nmbr|18101|neuromedin B receptor
mm9_v1_chr8_+_128822478_128822500	2.51642	FOXD3.p2	NM_175434|Slc35f3|210027|solute carrier family 35, member F3	AK046359|Slc35f3|210027|solute carrier family 35, member F3
mm9_v1_chr1_-_176851918_176851937	2.51428	FOXD3.p2	AK161827|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	BC079905|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr11_+_56825307_56825536	2.51366	FOXD3.p2	AK049958|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC056397|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102773|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	AB102774|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	BC060702|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr3_+_96049419_96049503	2.51356	FOXD3.p2	BC089519|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147778|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC147781|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK002725|Hist2h2aa1|15267|histone cluster 2, H2aa1	AK006728|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_013549|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC010564|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC053966|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC062255|Hist2h2aa1|15267|histone cluster 2, H2aa1	BC080809|Hist2h3c1|15077|histone cluster 2, H3c1	Z30940|Hist2h2aa1|15267|histone cluster 2, H2aa1	NM_178212|Hist2h2aa2|319192|histone cluster 2, H2aa2
mm9_v1_chr13_-_29043617_29043693	2.51059	FOXD3.p2	AK051540|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr4_-_83919835_83919836	2.51006	FOXD3.p2	AK018429|Bnc2|242509|basonuclin 2
mm9_v1_chr9_+_5345475_5345506	2.50827	FOXD3.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr1_+_17135421_17135611	2.50327	FOXD3.p2	AK149281|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK083814|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	NM_010267|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK045460|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	Y17850|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK020988|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC048177|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC060212|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK049655|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	BC051135|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1	AK139057|Gdap1|14545|ganglioside-induced differentiation-associated-protein 1
mm9_v1_chr10_-_83111346_83111470	2.50306	FOXD3.p2	BC048906|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK171512|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK168748|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK168403|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK160105|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK160075|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AY113706|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	NM_145220|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK161003|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK154525|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
mm9_v1_chr19_-_7351647_7351726	2.5019	FOXD3.p2	AK194221|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK218760|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr12_+_4082573_4082658	2.49969	FOXD3.p2	NM_153082|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC051140|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	AK049300|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27	BC042643|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr10_+_110929965_110929972	2.49798	FOXD3.p2	AK216281|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr6_+_121596815_121596927	2.49017	FOXD3.p2	BC023844|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr2_+_131763454_131763725	2.48782	FOXD3.p2	AK215651|Prnp|19122|prion protein	AK205534|Prnp|19122|prion protein	AK213884|Prnp|19122|prion protein	AK206219|Prnp|19122|prion protein
mm9_v1_chr3_-_52821116_52821157	2.48499	FOXD3.p2	AB093286|Cog6|67542|component of oligomeric golgi complex 6	AK048986|Cog6|67542|component of oligomeric golgi complex 6	AK153320|Cog6|67542|component of oligomeric golgi complex 6	AK031149|Cog6|67542|component of oligomeric golgi complex 6	AK045223|Cog6|67542|component of oligomeric golgi complex 6	NM_026225|Cog6|67542|component of oligomeric golgi complex 6	AK016663|Cog6|67542|component of oligomeric golgi complex 6
mm9_v1_chr8_+_73053287_73053425	2.47975	FOXD3.p2	BC003739|Fkbp8|14232|FK506 binding protein 8	AY225340|Fkbp8|14232|FK506 binding protein 8	AK216136|Fkbp8|14232|FK506 binding protein 8	AF030635|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr2_-_58368568_58368682	2.47144	FOXD3.p2	BC058718|Acvr1|11477|activin A receptor, type 1	AK052246|Acvr1|11477|activin A receptor, type 1
mm9_v1_chr3_+_95985065_95985205	2.46619	FOXD3.p2	AK080525|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK144166|Sv2a|64051|synaptic vesicle glycoprotein 2 a	BC046587|Sv2a|64051|synaptic vesicle glycoprotein 2 a	NM_022030|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK080502|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK028318|Sv2a|64051|synaptic vesicle glycoprotein 2 a
mm9_v1_chr18_+_37656644_37656807	2.4532	FOXD3.p2	AK029163|Pcdhb19|93890|protocadherin beta 19	AK147520|Pcdhb19|93890|protocadherin beta 19	AK160654|Pcdhb19|93890|protocadherin beta 19	NM_053144|Pcdhb19|93890|protocadherin beta 19	AK046363|Pcdhb19|93890|protocadherin beta 19	BC141290|Pcdhb19|93890|protocadherin beta 19	BC141291|Pcdhb19|93890|protocadherin beta 19	AF326312|Pcdhb19|93890|protocadherin beta 19	AY013780|Pcdhb19|93890|protocadherin beta 19
mm9_v1_chr5_-_37187944_37188018	2.4498	FOXD3.p2	AK009827|Mrfap1|67568|Morf4 family associated protein 1	BC010209|Mrfap1|67568|Morf4 family associated protein 1	AK170909|Mrfap1|67568|Morf4 family associated protein 1	AK170984|Mrfap1|67568|Morf4 family associated protein 1	AK017832|Mrfap1|67568|Morf4 family associated protein 1	AK167112|Mrfap1|67568|Morf4 family associated protein 1	AB041651|Mrfap1|67568|Morf4 family associated protein 1	AK159464|Mrfap1|67568|Morf4 family associated protein 1	AK005313|Mrfap1|67568|Morf4 family associated protein 1	NM_026242|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chr5_-_123183255_123183351	2.44545	FOXD3.p2	AK050846|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr10_-_24919916_24919967	2.44482	FOXD3.p2	AK086696|Akap7|432442|A kinase (PRKA) anchor protein 7	AK085630|Akap7|432442|A kinase (PRKA) anchor protein 7	AK139238|Akap7|432442|A kinase (PRKA) anchor protein 7
mm9_v1_chr4_+_40419212_40419212	2.4446	FOXD3.p2	AK044217|Tmem215|320500|transmembrane protein 215	AK044627|Tmem215|320500|transmembrane protein 215	NM_177175|Tmem215|320500|transmembrane protein 215
mm9_v1_chr12_+_30213224_30213265	2.44104	FOXD3.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr16_+_17045125_17045167	2.43742	FOXD3.p2	AK163692|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr7_+_52965052_52965376	2.43668	FOXD3.p2	AK192990|Dbp|13170|D site albumin promoter binding protein
mm9_v1_chr3_-_146433200_146433208	2.43442	FOXD3.p2	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr5_+_102910409_102910555	2.43204	FOXD3.p2	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr5_-_110698882_110698900	2.43152	FOXD3.p2	AK012159|Pgam5|72542|phosphoglycerate mutase family member 5	AK034588|Pgam5|72542|phosphoglycerate mutase family member 5	BC138924|Pgam5|72542|phosphoglycerate mutase family member 5	BC138925|Pgam5|72542|phosphoglycerate mutase family member 5	BC145467|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr1_-_170361525_170361683	2.42432	FOXD3.p2	BC002244|Pbx1|18514|pre B-cell leukemia transcription factor 1	AB221563|Pbx1|18514|pre B-cell leukemia transcription factor 1	HM369110|Pbx1|18514|pre B-cell leukemia transcription factor 1	L27453|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr19_-_5457470_5457607	2.42096	FOXD3.p2	BC016659|Ccdc85b|240514|coiled-coil domain containing 85B	BC094592|Ccdc85b|240514|coiled-coil domain containing 85B	BC058411|Ccdc85b|240514|coiled-coil domain containing 85B	NM_198616|Ccdc85b|240514|coiled-coil domain containing 85B
mm9_v1_chr3_-_115832278_115832299	2.41851	FOXD3.p2	CT010373|Vcam1|22329|vascular cell adhesion molecule 1	X67783|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr11_+_115626733_115626761	2.41126	FOXD3.p2	NM_028014|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene	AK155233|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr8_-_90483392_90483493	2.40606	FOXD3.p2	AY256893|Zfp423|94187|zinc finger protein 423	AK122365|Zfp423|94187|zinc finger protein 423	NM_033327|Zfp423|94187|zinc finger protein 423
mm9_v1_chr5_-_123064483_123064536	2.39677	FOXD3.p2	BC055721|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK161375|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AK013424|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	AF354757|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	NM_009879|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)	Y10495|Ift81|12589|intraflagellar transport 81 homolog (Chlamydomonas)
mm9_v1_chr9_+_64880208_64880292	2.39402	FOXD3.p2	AK155605|Dpp8|74388|dipeptidylpeptidase 8	BC043124|Dpp8|74388|dipeptidylpeptidase 8	BC059222|Dpp8|74388|dipeptidylpeptidase 8	NM_028906|Dpp8|74388|dipeptidylpeptidase 8
mm9_v1_chr6_-_137119016_137119017	2.39306	FOXD3.p2	NM_181988|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	BC026463|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr15_-_54670878_54670918	2.39179	FOXD3.p2	AK046689|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chrX_-_70510714_70510728	2.3917	FOXD3.p2	L22977|Xlr3c|22446|X-linked lymphocyte-regulated 3C	NM_011727|Xlr3c|22446|X-linked lymphocyte-regulated 3C	U02600|Xlr3c|22446|X-linked lymphocyte-regulated 3C
mm9_v1_chr2_+_21127350_21127413	2.38749	FOXD3.p2	AK029518|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_001001297|Thnsl1|208967|threonine synthase-like 1 (bacterial)	NM_177588|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK083895|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK033465|Thnsl1|208967|threonine synthase-like 1 (bacterial)	AK087148|Thnsl1|208967|threonine synthase-like 1 (bacterial)
mm9_v1_chr17_-_90487479_90487653	2.37524	FOXD3.p2	AK032032|Nrxn1|18189|neurexin I
mm9_v1_chr14_+_34899165_34899231	2.37467	FOXD3.p2	BC030407|Anxa8|11752|annexin A8	NM_013473|Anxa8|11752|annexin A8	AJ002390|Anxa8|11752|annexin A8	AK009085|Anxa8|11752|annexin A8	BC013271|Anxa8|11752|annexin A8	AK075870|Anxa8|11752|annexin A8
mm9_v1_chr9_-_48644030_48644051	2.36958	FOXD3.p2	AK040211|Zbtb16|235320|zinc finger and BTB domain containing 16	AK142947|Zbtb16|235320|zinc finger and BTB domain containing 16	NM_001033324|Zbtb16|235320|zinc finger and BTB domain containing 16
mm9_v1_chr18_+_37460452_37460636	2.36739	FOXD3.p2	AK030570|Pcdhb3|93874|protocadherin beta 3	NM_053128|Pcdhb3|93874|protocadherin beta 3	BC079557|Pcdhb3|93874|protocadherin beta 3	AF326296|Pcdhb3|93874|protocadherin beta 3	AY013785|Pcdhb3|93874|protocadherin beta 3
mm9_v1_chr2_+_109532592_109532697	2.36642	FOXD3.p2	AY057913|Bdnf|12064|brain derived neurotrophic factor	EF125673|Bdnf|12064|brain derived neurotrophic factor	NM_001048141|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr4_+_57858096_57858154	2.36412	FOXD3.p2	NM_001035532|Akap2|11641|A kinase (PRKA) anchor protein 2	NM_009649|Akap2|11641|A kinase (PRKA) anchor protein 2	AK041873|Akap2|11641|A kinase (PRKA) anchor protein 2	AK147420|Akap2|11641|A kinase (PRKA) anchor protein 2	BC003735|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr12_+_74224693_74224793	2.36396	FOXD3.p2	AK048499|Mnat1|17420|menage a trois 1	AK155859|Mnat1|17420|menage a trois 1	NM_008612|Mnat1|17420|menage a trois 1	AK008249|Mnat1|17420|menage a trois 1	BC089023|Mnat1|17420|menage a trois 1	BC115630|Mnat1|17420|menage a trois 1	BC115631|Mnat1|17420|menage a trois 1	AK157721|Mnat1|17420|menage a trois 1	AK008134|Mnat1|17420|menage a trois 1	AK053621|Mnat1|17420|menage a trois 1	AK011833|Mnat1|17420|menage a trois 1	AK029174|Mnat1|17420|menage a trois 1
mm9_v1_chr5_-_100812885_100812885	2.36276	FOXD3.p2	BC054358|Sec31a|69162|Sec31 homolog A (S. cerevisiae)
mm9_v1_chr2_-_24618566_24618692	2.35209	FOXD3.p2	AF042317|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_001042528|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_007579|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	U04999|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm9_v1_chr11_-_55209320_55209338	2.3517	FOXD3.p2	AK192259|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr12_+_53617063_53617093	2.35122	FOXD3.p2	NM_009706|Arhgap5|11855|Rho GTPase activating protein 5	BC150823|Arhgap5|11855|Rho GTPase activating protein 5
mm9_v1_chr6_+_134932018_134932018	2.34811	FOXD3.p2	NM_001109914|Apold1|381823|apolipoprotein L domain containing 1
mm9_v1_chr5_-_93612145_93612203	2.34677	FOXD3.p2	AK179364|Ccni|12453|cyclin I
mm9_v1_chr3_+_114783882_114783882	2.337	FOXD3.p2	AF442824|Olfm3|229759|olfactomedin 3	NM_153157|Olfm3|229759|olfactomedin 3
mm9_v1_chr11_-_20729367_20729429	2.33254	FOXD3.p2	AK081513|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr9_+_53698053_53698076	2.32943	FOXD3.p2	AK009005|Sln|66402|sarcolipin	AK008896|Sln|66402|sarcolipin	NM_025540|Sln|66402|sarcolipin	AK008863|Sln|66402|sarcolipin	BC028496|Sln|66402|sarcolipin
mm9_v1_chr15_-_81791230_81791327	2.32594	FOXD3.p2	AF007267|Pmm1|29858|phosphomannomutase 1	AK013805|Pmm1|29858|phosphomannomutase 1	AK166999|Pmm1|29858|phosphomannomutase 1	AK004631|Pmm1|29858|phosphomannomutase 1	NM_013872|Pmm1|29858|phosphomannomutase 1	BC006809|Pmm1|29858|phosphomannomutase 1
mm9_v1_chr17_-_46968361_46968361	2.32471	FOXD3.p2	BC151032|BC032203|210982|cDNA sequence BC032203	BC151054|BC032203|210982|cDNA sequence BC032203	NM_001100452|BC032203|210982|cDNA sequence BC032203
mm9_v1_chr15_-_58614642_58614788	2.31992	FOXD3.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr6_-_82889660_82889681	2.31711	FOXD3.p2	AK158292|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC139232|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr16_-_85173978_85173998	2.31537	FOXD3.p2	AK147543|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr17_-_28536156_28536297	2.31228	FOXD3.p2	AK164932|Fkbp5|14229|FK506 binding protein 5
mm9_v1_chr5_+_118426802_118426818	2.30682	FOXD3.p2	AK048131|Fbxo21|231670|F-box protein 21	AK048542|Fbxo21|231670|F-box protein 21
mm9_v1_chr5_+_150921233_150921280	2.30294	FOXD3.p2	AK157981|Fry|320365|furry homolog (Drosophila)
mm9_v1_chr3_+_159502646_159502709	2.29952	FOXD3.p2	BC075615|Wls|68151|wntless homolog (Drosophila)	NM_026582|Wls|68151|wntless homolog (Drosophila)	AK029053|Wls|68151|wntless homolog (Drosophila)	AK044810|Wls|68151|wntless homolog (Drosophila)	AK019886|Wls|68151|wntless homolog (Drosophila)	AK029104|Wls|68151|wntless homolog (Drosophila)	AK029315|Wls|68151|wntless homolog (Drosophila)	AK031444|Wls|68151|wntless homolog (Drosophila)	AK049842|Wls|68151|wntless homolog (Drosophila)	AK128912|Wls|68151|wntless homolog (Drosophila)	AK159207|Wls|68151|wntless homolog (Drosophila)	AK159977|Wls|68151|wntless homolog (Drosophila)	AK077407|Wls|68151|wntless homolog (Drosophila)
mm9_v1_chr8_+_59934719_59934875	2.29766	FOXD3.p2	AJ223206|Scrg1|20284|scrapie responsive gene 1	NM_009136|Scrg1|20284|scrapie responsive gene 1	BC058532|Scrg1|20284|scrapie responsive gene 1	AK046213|Scrg1|20284|scrapie responsive gene 1
mm9_v1_chr17_-_43803963_43804162	2.29729	FOXD3.p2	AK014394|Slc25a27|74011|solute carrier family 25, member 27	NM_028711|Slc25a27|74011|solute carrier family 25, member 27	BC138993|Slc25a27|74011|solute carrier family 25, member 27	BC138994|Slc25a27|74011|solute carrier family 25, member 27	AB106930|Slc25a27|74011|solute carrier family 25, member 27	AK021314|Slc25a27|74011|solute carrier family 25, member 27	AK043831|Slc25a27|74011|solute carrier family 25, member 27
mm9_v1_chr18_+_37874471_37874595	2.29458	FOXD3.p2	AK034910|Pcdhga7|93715|protocadherin gamma subfamily A, 7	BC077712|Pcdhga7|93715|protocadherin gamma subfamily A, 7	NM_033590|Pcdhga7|93715|protocadherin gamma subfamily A, 7	AY013801|Pcdhga7|93715|protocadherin gamma subfamily A, 7
mm9_v1_chr6_+_51494521_51494550	2.29245	FOXD3.p2	AK028163|Snx10|71982|sorting nexin 10	NM_001127348|Snx10|71982|sorting nexin 10	NM_028035|Snx10|71982|sorting nexin 10	AK166121|Snx10|71982|sorting nexin 10
mm9_v1_chr5_-_37187931_37187942	2.28799	FOXD3.p2	AK018675|Mrfap1|67568|Morf4 family associated protein 1	AK020049|Mrfap1|67568|Morf4 family associated protein 1	AK170789|Mrfap1|67568|Morf4 family associated protein 1
mm9_v1_chrX_-_70342343_70342433	2.28722	FOXD3.p2	BC107255|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC107283|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC127145|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC127146|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC093495|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC003812|Xlr3a|22445|X-linked lymphocyte-regulated 3A	NM_001110784|Xlr3a|22445|X-linked lymphocyte-regulated 3A
mm9_v1_chr10_-_60227439_60227519	2.28526	FOXD3.p2	AK084569|Unc5b|107449|unc-5 homolog B (C. elegans)	AK041547|Unc5b|107449|unc-5 homolog B (C. elegans)	AK159205|Unc5b|107449|unc-5 homolog B (C. elegans)
mm9_v1_chr15_-_84388113_84388233	2.28338	FOXD3.p2	AK083881|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr10_+_127764070_127764180	2.282	FOXD3.p2	
mm9_v1_chr1_+_184695026_184695133	2.28194	FOXD3.p2	BC021842|Susd4|96935|sushi domain containing 4	NM_144796|Susd4|96935|sushi domain containing 4	AK035779|Susd4|96935|sushi domain containing 4	AK088629|Susd4|96935|sushi domain containing 4
mm9_v1_chr15_-_96886327_96886398	2.28028	FOXD3.p2	AK164292|Slc38a4|69354|solute carrier family 38, member 4	AK167539|Slc38a4|69354|solute carrier family 38, member 4	AK051023|Slc38a4|69354|solute carrier family 38, member 4	NM_027052|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr17_+_70774131_70774133	2.2797	FOXD3.p2	NM_027712|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	NM_177639|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	BC062120|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr4_+_53556496_53556552	2.27908	FOXD3.p2	BC025941|Slc44a1|100434|solute carrier family 44, member 1
mm9_v1_chr19_+_8915018_8915039	2.27851	FOXD3.p2	AK004634|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK151606|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK155753|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK170183|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr13_-_54652983_54653158	2.27552	FOXD3.p2	AK216925|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK206564|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK215484|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK216083|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene	AK218676|4833439L19Rik|97820|RIKEN cDNA 4833439L19 gene
mm9_v1_chr2_-_155127037_155127091	2.27485	FOXD3.p2	BC013076|Pigu|228812|phosphatidylinositol glycan anchor biosynthesis, class U
mm9_v1_chr14_-_25306175_25306259	2.26968	FOXD3.p2	BC151168|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151002|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151169|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK143315|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC053071|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chr11_-_99877508_99877525	2.26907	FOXD3.p2	BC029257|Krt33a|71888|keratin 33A	AK009363|Krt33a|71888|keratin 33A	AK037251|Krt33a|71888|keratin 33A	NM_027983|Krt33a|71888|keratin 33A
mm9_v1_chr2_+_169458802_169458807	2.26874	FOXD3.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chrX_-_161764912_161765057	2.26414	FOXD3.p2	BC056342|Glra2|237213|glycine receptor, alpha 2 subunit	BC068987|Glra2|237213|glycine receptor, alpha 2 subunit	NM_183427|Glra2|237213|glycine receptor, alpha 2 subunit	AK135134|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr1_+_187156018_187156095	2.25437	FOXD3.p2	AK151931|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	NM_011794|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	AK093938|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	AK008714|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	AK008091|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	AK150877|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	AK152009|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	AK154435|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	AF125043|Bpnt1|23827|bisphosphate 3'-nucleotidase 1	BC011036|Bpnt1|23827|bisphosphate 3'-nucleotidase 1
mm9_v1_chr15_+_78859949_78859971	2.24791	FOXD3.p2	
mm9_v1_chrX_+_34335651_34335798	2.24293	FOXD3.p2	BC004570|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	BC086756|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	U10404|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK188826|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK195999|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr9_-_75238110_75238135	2.24052	FOXD3.p2	BC024684|Mapk6|50772|mitogen-activated protein kinase 6
mm9_v1_chr11_-_50641191_50641232	2.23991	FOXD3.p2	AK086760|Zfp354c|30944|zinc finger protein 354C	AK220194|Zfp354c|30944|zinc finger protein 354C	AK145882|Zfp354c|30944|zinc finger protein 354C	BC079908|Zfp354c|30944|zinc finger protein 354C	NM_013922|Zfp354c|30944|zinc finger protein 354C
mm9_v1_chr6_+_79968948_79969041	2.23943	FOXD3.p2	BC037216|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4	AK038656|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chr10_+_127525425_127525449	2.23857	FOXD3.p2	AK003460|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr19_-_5349573_5349573	2.23676	FOXD3.p2	AK078116|Cst6|73720|cystatin E/M	NM_028623|Cst6|73720|cystatin E/M
mm9_v1_chr16_+_45094196_45094202	2.23624	FOXD3.p2	AK032359|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr1_-_141982814_141983012	2.23602	FOXD3.p2	AK075670|Cfh|12628|complement component factor h	M31980|Cfh|12628|complement component factor h
mm9_v1_chr15_+_36103768_36103779	2.23407	FOXD3.p2	NM_001039368|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K	NM_023127|Polr2k|17749|polymerase (RNA) II (DNA directed) polypeptide K
mm9_v1_chrX_+_132277227_132277277	2.23154	FOXD3.p2	AK133950|Armcx5|494468|armadillo repeat containing, X-linked 5	NM_001004359|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	NM_001005385|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	NM_001009575|Armcx5|494468|armadillo repeat containing, X-linked 5	NM_026081|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	AK083192|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	AK031176|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	AK170837|Gprasp1|67298|G protein-coupled receptor associated sorting protein 1	AK166624|Armcx5|494468|armadillo repeat containing, X-linked 5
mm9_v1_chr9_+_37015872_37015947	2.23072	FOXD3.p2	AK161115|Tmem218|66279|transmembrane protein 218	BC034160|Tmem218|66279|transmembrane protein 218	NM_025464|Tmem218|66279|transmembrane protein 218	AK003010|Tmem218|66279|transmembrane protein 218	AK007575|Tmem218|66279|transmembrane protein 218	AK008902|Tmem218|66279|transmembrane protein 218
mm9_v1_chr18_+_37501355_37501397	2.2283	FOXD3.p2	AK034205|Pcdhb7|93878|protocadherin beta 7	NM_053132|Pcdhb7|93878|protocadherin beta 7	AK046463|Pcdhb7|93878|protocadherin beta 7	AK029340|Pcdhb7|93878|protocadherin beta 7	BC094897|Pcdhb7|93878|protocadherin beta 7	AK043979|Pcdhb7|93878|protocadherin beta 7
mm9_v1_chrX_-_9694712_9694834	2.2248	FOXD3.p2	AB028049|Srpx|51795|sushi-repeat-containing protein	AB028050|Srpx|51795|sushi-repeat-containing protein	BC022572|Srpx|51795|sushi-repeat-containing protein	AK034696|Srpx|51795|sushi-repeat-containing protein	NM_016911|Srpx|51795|sushi-repeat-containing protein	BC027630|Srpx|51795|sushi-repeat-containing protein	AK159662|Srpx|51795|sushi-repeat-containing protein
mm9_v1_chr3_+_66789587_66789619	2.22425	FOXD3.p2	AK012100|Rsrc1|66880|arginine/serine-rich coiled-coil 1	NM_025822|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK005242|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK043731|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK045433|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr9_-_44728790_44728826	2.21984	FOXD3.p2	AK011099|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019320|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005321|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008036|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008169|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	BC089555|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005380|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	NM_013795|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr5_+_117827904_117828056	2.21538	FOXD3.p2	AK195234|Wsb2|59043|WD repeat and SOCS box-containing 2	AK198504|Wsb2|59043|WD repeat and SOCS box-containing 2	AK206996|Wsb2|59043|WD repeat and SOCS box-containing 2	AK210681|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chrX_-_133275693_133275798	2.21481	FOXD3.p2	NM_001168225|Morf4l2|56397|mortality factor 4 like 2	AK183992|Morf4l2|56397|mortality factor 4 like 2	AK129038|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr4_-_149148173_149148404	2.21461	FOXD3.p2	AK017628|Slc25a33|70556|solute carrier family 25, member 33	BC011293|Slc25a33|70556|solute carrier family 25, member 33	AK157423|Slc25a33|70556|solute carrier family 25, member 33	NM_027460|Slc25a33|70556|solute carrier family 25, member 33
mm9_v1_chrX_-_96665980_96666083	2.21245	FOXD3.p2	AK005373|Pja1|18744|praja1, RING-H2 motif containing	BC037616|Pja1|18744|praja1, RING-H2 motif containing	AK181060|Pja1|18744|praja1, RING-H2 motif containing	AK181628|Pja1|18744|praja1, RING-H2 motif containing	AK188149|Pja1|18744|praja1, RING-H2 motif containing	BC025975|Pja1|18744|praja1, RING-H2 motif containing	AK145943|Pja1|18744|praja1, RING-H2 motif containing	AF335250|Pja1|18744|praja1, RING-H2 motif containing	AF335251|Pja1|18744|praja1, RING-H2 motif containing	AF335252|Pja1|18744|praja1, RING-H2 motif containing	AK135382|Pja1|18744|praja1, RING-H2 motif containing	NM_001083110|Pja1|18744|praja1, RING-H2 motif containing	NM_008853|Pja1|18744|praja1, RING-H2 motif containing
mm9_v1_chr5_+_137462888_137462891	2.21082	FOXD3.p2	BC054734|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	NM_011962|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	BC043047|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr10_+_127795461_127795537	2.21035	FOXD3.p2	DQ403125|Cs|12974|citrate synthase	AK012104|Cs|12974|citrate synthase
mm9_v1_chr7_-_16552844_16552883	2.20935	FOXD3.p2	AK050243|Ehd2|259300|EH-domain containing 2	AK031203|Ehd2|259300|EH-domain containing 2	NM_153068|Ehd2|259300|EH-domain containing 2
mm9_v1_chrX_+_7299332_7299351	2.20548	FOXD3.p2	AK018409|Wdr45|54636|WD repeat domain 45
mm9_v1_chr1_-_38851746_38851816	2.20381	FOXD3.p2	AK013739|Lonrf2|381338|LON peptidase N-terminal domain and ring finger 2
mm9_v1_chrX_+_7299358_7299459	2.20135	FOXD3.p2	BC011479|Wdr45|54636|WD repeat domain 45	NM_172372|Wdr45|54636|WD repeat domain 45	AF229635|Wdr45|54636|WD repeat domain 45
mm9_v1_chrX_+_45976650_45976756	2.19763	FOXD3.p2	AF076981|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535150|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535151|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	NM_011398|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr2_+_164388211_164388224	2.19372	FOXD3.p2	AK005519|Wfdc2|67701|WAP four-disulfide core domain 2	NM_026323|Wfdc2|67701|WAP four-disulfide core domain 2	AF334269|Wfdc2|67701|WAP four-disulfide core domain 2	BC099427|Wfdc2|67701|WAP four-disulfide core domain 2
mm9_v1_chr9_+_88734001_88734001	2.19145	FOXD3.p2	NM_001177858|Trim43c|666731|tripartite motif-containing 43C
mm9_v1_chr8_+_72676676_72676679	2.18849	FOXD3.p2	BC045147|Mef2b|17259|myocyte enhancer factor 2B	NM_001045484|Mef2b|17259|myocyte enhancer factor 2B	NM_008578|Mef2b|17259|myocyte enhancer factor 2B	D87833|Mef2b|17259|myocyte enhancer factor 2B	D87834|Mef2b|17259|myocyte enhancer factor 2B	D87835|Mef2b|17259|myocyte enhancer factor 2B	D87836|Mef2b|17259|myocyte enhancer factor 2B
mm9_v1_chr18_-_46471470_46471581	2.1866	FOXD3.p2	NM_001160399|Ccdc112|240261|coiled-coil domain containing 112
mm9_v1_chr2_+_175868350_175868436	2.18645	FOXD3.p2	AK013921|Gm6710|626832|predicted gene 6710	AK013829|Gm14391|665001|predicted gene 14391	NM_001099308|Gm14391|665001|predicted gene 14391	NM_001177480|Gm14391|665001|predicted gene 14391	NM_001164689|Gm6710|626832|predicted gene 6710	AK169456|Gm14391|665001|predicted gene 14391	U62393|Gm6710|626832|predicted gene 6710
mm9_v1_chr18_+_64425037_64425080	2.18586	FOXD3.p2	AK134678|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	BC075645|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	AK133780|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	X80502|St8sia3|20451|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm9_v1_chr5_+_31754808_31754902	2.18462	FOXD3.p2	NM_172993|Zfp512|269639|zinc finger protein 512	AK173267|Zfp512|269639|zinc finger protein 512	AK146353|Zfp512|269639|zinc finger protein 512	AK084205|Zfp512|269639|zinc finger protein 512	AK149921|Zfp512|269639|zinc finger protein 512	AK154918|Zfp512|269639|zinc finger protein 512	BC089160|Zfp512|269639|zinc finger protein 512	BC066136|Zfp512|269639|zinc finger protein 512
mm9_v1_chr8_-_93657840_93657925	2.18327	FOXD3.p2	BC008130|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	Z68183|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK146459|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK158704|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	BC034861|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein
mm9_v1_chrX_+_139997806_139997811	2.18239	FOXD3.p2	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr15_+_78744328_78744471	2.18215	FOXD3.p2	BC049107|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	NM_020271|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AY366300|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AK043228|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	BC046955|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase	AB041662|Pdxp|57028|pyridoxal (pyridoxine, vitamin B6) phosphatase
mm9_v1_chr3_+_105916283_105916305	2.18157	FOXD3.p2	AK007573|Chia|81600|chitinase, acidic	AK008633|Chia|81600|chitinase, acidic	AK008650|Chia|81600|chitinase, acidic	AK008757|Chia|81600|chitinase, acidic	AK160173|Chia|81600|chitinase, acidic	BC034548|Chia|81600|chitinase, acidic	NM_023186|Chia|81600|chitinase, acidic	AF290003|Chia|81600|chitinase, acidic	DQ349202|Chia|81600|chitinase, acidic	EF094027|Chia|81600|chitinase, acidic	BC011134|Chia|81600|chitinase, acidic	AF154571|Chia|81600|chitinase, acidic
mm9_v1_chr19_+_29772410_29772430	2.17853	FOXD3.p2	AK020928|Mlana|77836|melan-A	BC111114|Mlana|77836|melan-A	NM_029993|Mlana|77836|melan-A
mm9_v1_chr8_+_87561055_87561132	2.1778	FOXD3.p2	NM_001122843|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)	BC003275|Tnpo2|212999|transportin 2 (importin 3, karyopherin beta 2b)
mm9_v1_chr2_+_51893618_51893676	2.17652	FOXD3.p2	AK139985|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	NM_009398|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	U83903|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6	BC021155|Tnfaip6|21930|tumor necrosis factor alpha induced protein 6
mm9_v1_chr8_-_96622710_96622710	2.17332	FOXD3.p2	AF342737|Bbs2|67378|Bardet-Biedl syndrome 2 (human)	NM_026116|Bbs2|67378|Bardet-Biedl syndrome 2 (human)
mm9_v1_chr12_+_105625371_105625401	2.17194	FOXD3.p2	NM_009253|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M	BC053337|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M	X55148|Serpina3m|20717|serine (or cysteine) peptidase inhibitor, clade A, member 3M
mm9_v1_chr10_-_8605668_8605870	2.16986	FOXD3.p2	AJ507736|Sash1|70097|SAM and SH3 domain containing 1	AK149872|Sash1|70097|SAM and SH3 domain containing 1	AK049453|Sash1|70097|SAM and SH3 domain containing 1	NM_175155|Sash1|70097|SAM and SH3 domain containing 1
mm9_v1_chr10_-_80889856_80889928	2.16896	FOXD3.p2	U57635|Nfic|18029|nuclear factor I/C	Y07692|Nfic|18029|nuclear factor I/C	AK087539|Nfic|18029|nuclear factor I/C	AK147496|Nfic|18029|nuclear factor I/C	AK155258|Nfic|18029|nuclear factor I/C	NM_008688|Nfic|18029|nuclear factor I/C	NM_026756|Nfic|18029|nuclear factor I/C
mm9_v1_chr11_+_102465684_102465793	2.1624	FOXD3.p2	NM_020510|Fzd2|57265|frizzled homolog 2 (Drosophila)	BC055727|Fzd2|57265|frizzled homolog 2 (Drosophila)	AK048420|Fzd2|57265|frizzled homolog 2 (Drosophila)	AK135363|Fzd2|57265|frizzled homolog 2 (Drosophila)
mm9_v1_chr7_-_29123724_29123770	2.15555	FOXD3.p2	AK146583|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK145465|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	BC007132|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	NM_013676|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	U88539|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	BC057449|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK146055|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK146453|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK159786|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)	AK145117|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)
mm9_v1_chr1_-_173465423_173465424	2.15217	FOXD3.p2	AB016496|Itln1|16429|intelectin 1 (galactofuranose binding)	NM_010584|Itln1|16429|intelectin 1 (galactofuranose binding)	AK007447|Itln1|16429|intelectin 1 (galactofuranose binding)
mm9_v1_chr9_+_23027995_23028014	2.14953	FOXD3.p2	AY263358|Bmper|73230|BMP-binding endothelial regulator	BC066153|Bmper|73230|BMP-binding endothelial regulator
mm9_v1_chr8_-_88214871_88214907	2.14876	FOXD3.p2	AY138991|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	BC068168|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2	NM_001081324|Neto2|74513|neuropilin (NRP) and tolloid (TLL)-like 2
mm9_v1_chr2_+_151368197_151368330	2.14698	FOXD3.p2	NM_008019|Fkbp1a|14225|FK506 binding protein 1a	AK019362|Fkbp1a|14225|FK506 binding protein 1a	AK010693|Fkbp1a|14225|FK506 binding protein 1a	AK145400|Fkbp1a|14225|FK506 binding protein 1a	AK169242|Fkbp1a|14225|FK506 binding protein 1a	AK141261|Fkbp1a|14225|FK506 binding protein 1a	AK168333|Fkbp1a|14225|FK506 binding protein 1a
mm9_v1_chrX_-_147241307_147241451	2.14042	FOXD3.p2	AK179193|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr16_-_75766992_75767062	2.14014	FOXD3.p2	BC039701|Hspa13|110920|heat shock protein 70 family, member 13	AK167839|Hspa13|110920|heat shock protein 70 family, member 13	BC094508|Hspa13|110920|heat shock protein 70 family, member 13	BC085181|Hspa13|110920|heat shock protein 70 family, member 13	AK049011|Hspa13|110920|heat shock protein 70 family, member 13	AK021006|Hspa13|110920|heat shock protein 70 family, member 13	AK030553|Hspa13|110920|heat shock protein 70 family, member 13	AK034643|Hspa13|110920|heat shock protein 70 family, member 13	NM_030201|Hspa13|110920|heat shock protein 70 family, member 13
mm9_v1_chr19_-_44060949_44061012	2.13551	FOXD3.p2	BC014692|Cpn1|93721|carboxypeptidase N, polypeptide 1	AB021969|Cpn1|93721|carboxypeptidase N, polypeptide 1	AF326477|Cpn1|93721|carboxypeptidase N, polypeptide 1	NM_030703|Cpn1|93721|carboxypeptidase N, polypeptide 1
mm9_v1_chr3_+_51028368_51028391	2.13344	FOXD3.p2	AK087790|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	NM_009834|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AF183960|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AK149340|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
mm9_v1_chr10_-_12912880_12912990	2.12855	FOXD3.p2	AK011491|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC069962|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC067062|Ltv1|353258|LTV1 homolog (S. cerevisiae)	NM_181470|Ltv1|353258|LTV1 homolog (S. cerevisiae)
mm9_v1_chr4_+_94405963_94405990	2.12571	FOXD3.p2	BC050824|Tek|21687|endothelial-specific receptor tyrosine kinase	D13738|Tek|21687|endothelial-specific receptor tyrosine kinase	NM_013690|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr9_-_110018085_110018088	2.12564	FOXD3.p2	AB047557|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_133347|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC058331|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr8_-_126384108_126384108	2.12466	FOXD3.p2	BC036300|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene	NM_028536|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene
mm9_v1_chr2_-_175032305_175032443	2.12216	FOXD3.p2	BC086920|Gm6710|626832|predicted gene 6710	U62393|Gm6710|626832|predicted gene 6710	AK169456|Gm14391|665001|predicted gene 14391	NM_001164689|Gm6710|626832|predicted gene 6710	AK013829|Gm14391|665001|predicted gene 14391	NM_001099308|Gm14391|665001|predicted gene 14391	NM_001177480|Gm14391|665001|predicted gene 14391	AK013921|Gm6710|626832|predicted gene 6710
mm9_v1_chr16_-_85173944_85173969	2.12164	FOXD3.p2	AK159245|App|11820|amyloid beta (A4) precursor protein	BC070409|App|11820|amyloid beta (A4) precursor protein	AK133639|App|11820|amyloid beta (A4) precursor protein	AK159352|App|11820|amyloid beta (A4) precursor protein	AK030583|App|11820|amyloid beta (A4) precursor protein	AK128971|App|11820|amyloid beta (A4) precursor protein	NM_001198823|App|11820|amyloid beta (A4) precursor protein	NM_001198824|App|11820|amyloid beta (A4) precursor protein	NM_001198825|App|11820|amyloid beta (A4) precursor protein	NM_001198826|App|11820|amyloid beta (A4) precursor protein	NM_007471|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chrX_+_34805369_34805468	2.12003	FOXD3.p2	AJ972665|Rhox4a|664609|reproductive homeobox 4A	NM_001039688|Rhox4a|664609|reproductive homeobox 4A	DQ058641|Rhox4a|664609|reproductive homeobox 4A	BC116370|Rhox4a|664609|reproductive homeobox 4A	BC116371|Rhox4a|664609|reproductive homeobox 4A	AK017380|Rhox4a|664609|reproductive homeobox 4A	BC057925|Rhox4a|664609|reproductive homeobox 4A	BC145382|Rhox4a|664609|reproductive homeobox 4A	BC171959|Rhox4a|664609|reproductive homeobox 4A
mm9_v1_chr18_+_37560490_37560542	2.11776	FOXD3.p2	AK032626|Pcdhb9|93880|protocadherin beta 9	NM_053134|Pcdhb9|93880|protocadherin beta 9	BC055319|Pcdhb9|93880|protocadherin beta 9	BC062640|Pcdhb9|93880|protocadherin beta 9
mm9_v1_chr15_+_83622380_83622428	2.11613	FOXD3.p2	BC057550|Mpped1|223726|metallophosphoesterase domain containing 1
mm9_v1_chr16_+_22920274_22920459	2.11382	FOXD3.p2	NM_001083904|Fetub|59083|fetuin beta	NM_021564|Fetub|59083|fetuin beta	AY138459|Fetub|59083|fetuin beta	AJ242927|Fetub|59083|fetuin beta
mm9_v1_chr11_-_60166405_60166439	2.10224	FOXD3.p2	AK166040|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039092|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039093|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_153080|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr2_+_29658139_29658348	2.09974	FOXD3.p2	AK170377|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK036919|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	NM_011989|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK155313|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK155388|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK196043|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	BC023114|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4
mm9_v1_chr7_-_15031917_15031936	2.09783	FOXD3.p2	EU486167|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	AK041070|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	NM_175250|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene	EU486166|2810007J24Rik|76971|RIKEN cDNA 2810007J24 gene
mm9_v1_chr10_+_127525538_127525558	2.09537	FOXD3.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr2_-_30270970_30271290	2.09491	FOXD3.p2	X85983|Crat|12908|carnitine acetyltransferase	BC006668|Crat|12908|carnitine acetyltransferase	AK041431|Crat|12908|carnitine acetyltransferase	AK170740|Crat|12908|carnitine acetyltransferase	NM_007760|Crat|12908|carnitine acetyltransferase	AK132179|Crat|12908|carnitine acetyltransferase
mm9_v1_chr12_-_81861527_81861701	2.09188	FOXD3.p2	AK147473|Gm1568|380768|predicted gene 1568	BC067044|Gm1568|380768|predicted gene 1568	NM_001008423|Gm1568|380768|predicted gene 1568
mm9_v1_chr11_-_40562196_40562300	2.09051	FOXD3.p2	
mm9_v1_chr6_-_82889694_82889743	2.0894	FOXD3.p2	AB021291|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC057048|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC090625|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK047067|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC094567|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK035993|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK143196|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_001113481|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_011350|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr6_+_113442698_113442948	2.08924	FOXD3.p2	
mm9_v1_chr13_+_4058817_4058874	2.08678	FOXD3.p2	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chr13_-_86186317_86186413	2.08428	FOXD3.p2	X52940|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK027989|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK002494|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK153444|Cox7c|12867|cytochrome c oxidase, subunit VIIc	BC086792|Cox7c|12867|cytochrome c oxidase, subunit VIIc	BC010772|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK168077|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK131871|Cox7c|12867|cytochrome c oxidase, subunit VIIc	NM_007749|Cox7c|12867|cytochrome c oxidase, subunit VIIc
mm9_v1_chr16_+_38742446_38742523	2.08411	FOXD3.p2	AK041692|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK136637|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr5_-_5749270_5749396	2.08376	FOXD3.p2	AK144312|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	AY029584|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	BC061023|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	AK010437|Steap1|70358|six transmembrane epithelial antigen of the prostate 1	NM_027399|Steap1|70358|six transmembrane epithelial antigen of the prostate 1
mm9_v1_chr18_+_35000283_35000409	2.08319	FOXD3.p2	BC020184|Reep2|225362|receptor accessory protein 2	NM_144865|Reep2|225362|receptor accessory protein 2	AK147333|Reep2|225362|receptor accessory protein 2	AY562230|Reep2|225362|receptor accessory protein 2	EU555417|Reep2|225362|receptor accessory protein 2
mm9_v1_chrX_-_93152262_93152300	2.08157	FOXD3.p2	AK089160|Las1l|76130|LAS1-like (S. cerevisiae)	NM_152822|Las1l|76130|LAS1-like (S. cerevisiae)	AK163919|Las1l|76130|LAS1-like (S. cerevisiae)
mm9_v1_chr6_+_73198498_73198722	2.08009	FOXD3.p2	NM_019879|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK088888|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK005080|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK087390|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK002754|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AF144101|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK139288|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	BC011087|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK184184|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr2_-_180701822_180701878	2.0796	FOXD3.p2	
mm9_v1_chr11_-_100355280_100355392	2.07528	FOXD3.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr12_+_88784829_88784845	2.07231	FOXD3.p2	NM_026958|1810035L17Rik|380773|RIKEN cDNA 1810035L17 gene
mm9_v1_chr4_-_12099125_12099161	2.06447	FOXD3.p2	AK032690|Fam92a|68099|family with sequence similarity 92, member A	AK078438|Fam92a|68099|family with sequence similarity 92, member A	AK088705|Fam92a|68099|family with sequence similarity 92, member A	NM_026558|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr12_+_110779204_110779231	2.06227	FOXD3.p2	AK145456|Meg3|17263|maternally expressed 3	AK155982|Meg3|17263|maternally expressed 3	AK157178|Meg3|17263|maternally expressed 3	Y13832|Meg3|17263|maternally expressed 3	BC094421|Meg3|17263|maternally expressed 3
mm9_v1_chr5_-_122907002_122907003	2.06139	FOXD3.p2	AK134659|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr14_+_115491514_115491644	2.05805	FOXD3.p2	BC115712|Gpc5|103978|glypican 5
mm9_v1_chr3_-_84283349_84283412	2.05799	FOXD3.p2	BC137632|Fhdc1|229474|FH2 domain containing 1	AK173244|Fhdc1|229474|FH2 domain containing 1
mm9_v1_chr16_+_93608058_93608176	2.05559	FOXD3.p2	NM_007620|Cbr1|12408|carbonyl reductase 1	U31966|Cbr1|12408|carbonyl reductase 1	BC158026|Cbr1|12408|carbonyl reductase 1	BC158029|Cbr1|12408|carbonyl reductase 1	AK146805|Cbr1|12408|carbonyl reductase 1	BC012714|Cbr1|12408|carbonyl reductase 1
mm9_v1_chr13_+_94077988_94077988	2.05291	FOXD3.p2	AY137385|Homer1|26556|homer homolog 1 (Drosophila)	NM_152134|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr6_-_128476708_128476738	2.04785	FOXD3.p2	M93264|Pzp|11287|pregnancy zone protein	NM_007376|Pzp|11287|pregnancy zone protein
mm9_v1_chr7_+_118172447_118172534	2.04343	FOXD3.p2	NM_009431|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040331|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC024749|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK083921|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK045101|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040205|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC080719|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC060091|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK148536|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC010344|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC053910|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	L49502|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr2_-_66473008_66473018	2.0405	FOXD3.p2	NM_018852|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha	AK141871|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha
mm9_v1_chr9_-_56008595_56008764	2.03614	FOXD3.p2	AK089494|Tspan3|56434|tetraspanin 3	AK154919|Tspan3|56434|tetraspanin 3	AB009021|Tspan3|56434|tetraspanin 3	AF133427|Tspan3|56434|tetraspanin 3	AB072450|Tspan3|56434|tetraspanin 3	AK053325|Tspan3|56434|tetraspanin 3	AK141951|Tspan3|56434|tetraspanin 3	AK006798|Tspan3|56434|tetraspanin 3	AK152175|Tspan3|56434|tetraspanin 3
mm9_v1_chr9_+_121619443_121619529	2.03534	FOXD3.p2	AK049702|Deb1|26901|differentially expressed in B16F10 1	AK003863|Deb1|26901|differentially expressed in B16F10 1	BC027548|Deb1|26901|differentially expressed in B16F10 1	NM_026794|Deb1|26901|differentially expressed in B16F10 1
mm9_v1_chr9_+_107465568_107465700	2.03447	FOXD3.p2	AK082684|Tusc2|80385|tumor suppressor candidate 2	BC048477|Tusc2|80385|tumor suppressor candidate 2	NM_019742|Tusc2|80385|tumor suppressor candidate 2	AK004430|Tusc2|80385|tumor suppressor candidate 2	AF123387|Tusc2|80385|tumor suppressor candidate 2
mm9_v1_chr1_-_137268058_137268336	2.02884	FOXD3.p2	AK199485|Shisa4|77552|shisa homolog 4 (Xenopus laevis)	AK212908|Shisa4|77552|shisa homolog 4 (Xenopus laevis)
mm9_v1_chr5_+_136455974_136455989	2.02768	FOXD3.p2	BC100745|Zp3|22788|zona pellucida glycoprotein 3	BC103583|Zp3|22788|zona pellucida glycoprotein 3	BC103584|Zp3|22788|zona pellucida glycoprotein 3	BC103585|Zp3|22788|zona pellucida glycoprotein 3	M20026|Zp3|22788|zona pellucida glycoprotein 3	NM_011776|Zp3|22788|zona pellucida glycoprotein 3	AK131934|Zp3|22788|zona pellucida glycoprotein 3	BC099465|Zp3|22788|zona pellucida glycoprotein 3
mm9_v1_chr7_-_140315030_140315061	2.02732	FOXD3.p2	AB033123|Ctbp2|13017|C-terminal binding protein 2	AK147871|Ctbp2|13017|C-terminal binding protein 2	AK146713|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr5_-_135115175_135115219	2.02485	FOXD3.p2	AK169312|Eif4h|22384|eukaryotic translation initiation factor 4H	AK149841|Eif4h|22384|eukaryotic translation initiation factor 4H	AK136999|Eif4h|22384|eukaryotic translation initiation factor 4H	AK135390|Eif4h|22384|eukaryotic translation initiation factor 4H	AK166567|Eif4h|22384|eukaryotic translation initiation factor 4H	AK169353|Eif4h|22384|eukaryotic translation initiation factor 4H	NM_033561|Eif4h|22384|eukaryotic translation initiation factor 4H	AK045004|Eif4h|22384|eukaryotic translation initiation factor 4H	AK150088|Eif4h|22384|eukaryotic translation initiation factor 4H	BC014796|Eif4h|22384|eukaryotic translation initiation factor 4H	AK088818|Eif4h|22384|eukaryotic translation initiation factor 4H	AK168872|Eif4h|22384|eukaryotic translation initiation factor 4H	AK169407|Eif4h|22384|eukaryotic translation initiation factor 4H	AK132034|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr11_-_103815317_103815332	2.02253	FOXD3.p2	AK085086|Nsf|18195|N-ethylmaleimide sensitive fusion protein	U10120|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr4_-_49562319_49562386	2.02246	FOXD3.p2	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr12_-_73337534_73337705	2.01902	FOXD3.p2	AK013731|Rtn1|104001|reticulon 1	AK014358|Rtn1|104001|reticulon 1
mm9_v1_chr8_+_88016464_88016489	2.01456	FOXD3.p2	AK082030|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	BC034219|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2
mm9_v1_chr4_+_117222924_117223239	2.01331	FOXD3.p2	AK144107|Eri3|140546|exoribonuclease 3	BC096545|Eri3|140546|exoribonuclease 3	AK083017|Eri3|140546|exoribonuclease 3	NM_080469|Eri3|140546|exoribonuclease 3	BC116685|Eri3|140546|exoribonuclease 3	BC117540|Eri3|140546|exoribonuclease 3
mm9_v1_chr6_-_7643156_7643286	2.01313	FOXD3.p2	AK167933|Asns|27053|asparagine synthetase	AK167524|Asns|27053|asparagine synthetase	BC005552|Asns|27053|asparagine synthetase	NM_012055|Asns|27053|asparagine synthetase	U38940|Asns|27053|asparagine synthetase	AK160459|Asns|27053|asparagine synthetase	AK076207|Asns|27053|asparagine synthetase
mm9_v1_chr8_-_114255972_114256047	2.01029	FOXD3.p2	AK166248|Bcar1|12927|breast cancer anti-estrogen resistance 1	AK079554|Bcar1|12927|breast cancer anti-estrogen resistance 1	AK159168|Bcar1|12927|breast cancer anti-estrogen resistance 1	AK159297|Bcar1|12927|breast cancer anti-estrogen resistance 1	AK138372|Bcar1|12927|breast cancer anti-estrogen resistance 1	U28151|Bcar1|12927|breast cancer anti-estrogen resistance 1	AK167352|Bcar1|12927|breast cancer anti-estrogen resistance 1	AK167504|Bcar1|12927|breast cancer anti-estrogen resistance 1	NM_001198839|Bcar1|12927|breast cancer anti-estrogen resistance 1
mm9_v1_chr14_+_115491436_115491496	2.01027	FOXD3.p2	AK134807|Gpc5|103978|glypican 5	NM_175500|Gpc5|103978|glypican 5	AK038547|Gpc5|103978|glypican 5	AK084223|Gpc5|103978|glypican 5
mm9_v1_chr15_+_25682945_25682960	2.0089	FOXD3.p2	AK161653|Myo10|17909|myosin X
mm9_v1_chr13_+_38243146_38243311	2.00661	FOXD3.p2	NM_023842|Dsp|109620|desmoplakin
mm9_v1_chr3_-_120874549_120874636	2.00333	FOXD3.p2	AK014130|Rwdd3|66568|RWD domain containing 3	AK134288|Rwdd3|66568|RWD domain containing 3	AK153551|Rwdd3|66568|RWD domain containing 3	AF439556|Rwdd3|66568|RWD domain containing 3	AF439557|Rwdd3|66568|RWD domain containing 3	AK011007|Rwdd3|66568|RWD domain containing 3	AK011008|Rwdd3|66568|RWD domain containing 3	BC128287|Rwdd3|66568|RWD domain containing 3	BC128288|Rwdd3|66568|RWD domain containing 3	BC139340|Rwdd3|66568|RWD domain containing 3	BC139342|Rwdd3|66568|RWD domain containing 3	BC150838|Rwdd3|66568|RWD domain containing 3	AK151329|Rwdd3|66568|RWD domain containing 3	AK151467|Rwdd3|66568|RWD domain containing 3	NM_025637|Rwdd3|66568|RWD domain containing 3	NM_028456|Rwdd3|66568|RWD domain containing 3
mm9_v1_chr10_-_4752710_4752812	2.0022	FOXD3.p2	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr9_+_82723410_82723412	1.99753	FOXD3.p2	AK020170|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	NM_001168240|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	NM_022986|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr16_-_46496886_46497132	1.99603	FOXD3.p2	AF195834|Pvrl3|58998|poliovirus receptor-related 3	AF195835|Pvrl3|58998|poliovirus receptor-related 3	BC125588|Pvrl3|58998|poliovirus receptor-related 3	BC132187|Pvrl3|58998|poliovirus receptor-related 3	AF195833|Pvrl3|58998|poliovirus receptor-related 3	AK011949|Pvrl3|58998|poliovirus receptor-related 3	NM_021495|Pvrl3|58998|poliovirus receptor-related 3	NM_021496|Pvrl3|58998|poliovirus receptor-related 3	NM_021497|Pvrl3|58998|poliovirus receptor-related 3
mm9_v1_chr3_-_98367865_98367960	1.99515	FOXD3.p2	NM_001111336|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	BC132402|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	BC013449|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	L16919|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	AK146749|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	NM_008294|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4
mm9_v1_chr15_+_97800138_97800260	1.98636	FOXD3.p2	
mm9_v1_chrX_+_159216296_159216363	1.98303	FOXD3.p2	AK181761|Rbbp7|245688|retinoblastoma binding protein 7	AK206140|Rbbp7|245688|retinoblastoma binding protein 7	AK213569|Rbbp7|245688|retinoblastoma binding protein 7	AK207469|Rbbp7|245688|retinoblastoma binding protein 7	AK208251|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr7_+_121184667_121184743	1.97499	FOXD3.p2	AK084717|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr2_-_151458299_151458319	1.97235	FOXD3.p2	AK047595|Snph|241727|syntaphilin	AK138230|Snph|241727|syntaphilin	AK047568|Snph|241727|syntaphilin
mm9_v1_chr10_+_115614313_115614481	1.96583	FOXD3.p2	NM_001161839|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	NM_001161838|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	NM_001161840|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	AF041866|Ptprr|19279|protein tyrosine phosphatase, receptor type, R	AF129509|Ptprr|19279|protein tyrosine phosphatase, receptor type, R
mm9_v1_chr7_-_148086285_148086315	1.96519	FOXD3.p2	AK003116|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC027531|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	U15541|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC086930|Cox8b|12869|cytochrome c oxidase, subunit VIIIb
mm9_v1_chr6_-_5143755_5143945	1.96193	FOXD3.p2	BC012706|Pon1|18979|paraoxonase 1	U72636|Pon1|18979|paraoxonase 1	U32684|Pon1|18979|paraoxonase 1	NM_011134|Pon1|18979|paraoxonase 1
mm9_v1_chr4_+_8462756_8462764	1.95616	FOXD3.p2	AK150030|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr1_+_174065263_174065366	1.95486	FOXD3.p2	AK218140|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr7_+_24866915_24866972	1.9546	FOXD3.p2	AK144892|Zfp180|210135|zinc finger protein 180	AK083802|Zfp180|210135|zinc finger protein 180	BC085472|Zfp180|210135|zinc finger protein 180	AK145004|Zfp180|210135|zinc finger protein 180	BC066115|Zfp180|210135|zinc finger protein 180	AK141922|Zfp180|210135|zinc finger protein 180	NM_001045486|Zfp180|210135|zinc finger protein 180	AK154182|Zfp180|210135|zinc finger protein 180	BC063741|Zfp180|210135|zinc finger protein 180
mm9_v1_chr16_+_45094214_45094287	1.95303	FOXD3.p2	AB075019|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr12_+_84866998_84867032	1.9504	FOXD3.p2	NM_001165256|Dcaf4|73828|DDB1 and CUL4 associated factor 4	BC003284|Dcaf4|73828|DDB1 and CUL4 associated factor 4
mm9_v1_chr3_-_36512237_36512327	1.9497	FOXD3.p2	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr7_-_126622690_126622768	1.94909	FOXD3.p2	AK144065|Umod|22242|uromodulin	AK164688|Umod|22242|uromodulin	L33406|Umod|22242|uromodulin	AK165507|Umod|22242|uromodulin	AK085460|Umod|22242|uromodulin	NM_009470|Umod|22242|uromodulin
mm9_v1_chr3_+_41419561_41419606	1.94884	FOXD3.p2	AK040146|Phf17|269424|PHD finger protein 17
mm9_v1_chr16_+_34921598_34921714	1.9483	FOXD3.p2	AY237727|Mylk|107589|myosin, light polypeptide kinase	BC045197|Mylk|107589|myosin, light polypeptide kinase	AK078556|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr2_-_151458256_151458277	1.9465	FOXD3.p2	AK032279|Snph|241727|syntaphilin	AK122262|Snph|241727|syntaphilin	NM_198214|Snph|241727|syntaphilin
mm9_v1_chr1_+_181476534_181476659	1.94428	FOXD3.p2	AK146681|Cnst|226744|consortin, connexin sorting protein	AK089290|Cnst|226744|consortin, connexin sorting protein	AK036332|Cnst|226744|consortin, connexin sorting protein	AK040899|Cnst|226744|consortin, connexin sorting protein	AK040666|Cnst|226744|consortin, connexin sorting protein	AK087361|Cnst|226744|consortin, connexin sorting protein	BC054802|Cnst|226744|consortin, connexin sorting protein	NM_146105|Cnst|226744|consortin, connexin sorting protein
mm9_v1_chr2_-_84614976_84615011	1.94028	FOXD3.p2	AK165744|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1	AK144292|Serping1|12258|serine (or cysteine) peptidase inhibitor, clade G, member 1
mm9_v1_chr12_+_101447480_101447584	1.93611	FOXD3.p2	BC021618|Calm1|12313|calmodulin 1
mm9_v1_chr14_+_120674886_120674908	1.93338	FOXD3.p2	NM_175341|Mbnl2|105559|muscleblind-like 2	NM_207515|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr1_+_174078246_174078256	1.93113	FOXD3.p2	AK035701|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr4_+_120550473_120550605	1.93107	FOXD3.p2	AY326953|Rims3|242662|regulating synaptic membrane exocytosis 3	BC115536|Rims3|242662|regulating synaptic membrane exocytosis 3	NM_182929|Rims3|242662|regulating synaptic membrane exocytosis 3	AK122226|Rims3|242662|regulating synaptic membrane exocytosis 3
mm9_v1_chr10_-_82153323_82153394	1.92983	FOXD3.p2	BC082561|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK040842|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK086276|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK136351|Glt8d2|74782|glycosyltransferase 8 domain containing 2	AK003894|Glt8d2|74782|glycosyltransferase 8 domain containing 2	NM_029102|Glt8d2|74782|glycosyltransferase 8 domain containing 2
mm9_v1_chr11_+_69778907_69778927	1.92524	FOXD3.p2	AK145504|Cldn7|53624|claudin 7	NM_016887|Cldn7|53624|claudin 7
mm9_v1_chr14_+_106081278_106081354	1.92456	FOXD3.p2	
mm9_v1_chr7_-_3629631_3629799	1.921	FOXD3.p2	AK211361|Mboat7|77582|membrane bound O-acyltransferase domain containing 7
mm9_v1_chr18_-_64648604_64648678	1.91886	FOXD3.p2	AK084843|Fech|14151|ferrochelatase	BC096770|Fech|14151|ferrochelatase
mm9_v1_chr2_-_59720568_59720662	1.91623	FOXD3.p2	AK178836|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	AK011391|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	BC050792|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	BC061948|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	NM_001159636|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	NM_028118|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1
mm9_v1_chr15_-_32174404_32174416	1.91274	FOXD3.p2	AK002304|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr11_+_78332692_78332747	1.90957	FOXD3.p2	
mm9_v1_chr6_+_108163089_108163111	1.90835	FOXD3.p2	AK047719|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	AK137477|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	NM_010585|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1	X15373|Itpr1|16438|inositol 1,4,5-triphosphate receptor 1
mm9_v1_chr19_-_41151561_41151602	1.90622	FOXD3.p2	BC060980|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	AK140031|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	NM_153520|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein
mm9_v1_chr11_+_98725073_98725122	1.90151	FOXD3.p2	BC057854|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr16_+_20672847_20672848	1.89497	FOXD3.p2	AK134557|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr1_+_166205728_166205836	1.88602	FOXD3.p2	BC060044|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	NM_029115|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK076640|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK149168|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	AK015464|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene	BC048086|4930455F23Rik|74895|RIKEN cDNA 4930455F23 gene
mm9_v1_chr18_-_64676160_64676211	1.88298	FOXD3.p2	AK083730|Nars|70223|asparaginyl-tRNA synthetase	AK157244|Nars|70223|asparaginyl-tRNA synthetase	AK172657|Nars|70223|asparaginyl-tRNA synthetase	AK077699|Nars|70223|asparaginyl-tRNA synthetase	NM_001142950|Nars|70223|asparaginyl-tRNA synthetase	NM_027350|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr18_+_78020588_78020649	1.88226	FOXD3.p2	AK180896|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK184454|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK214653|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK214982|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK215077|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr6_+_37755974_37756050	1.88186	FOXD3.p2	AK170346|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	AK146159|Atp6v0c|11984|ATPase, H+ transporting, lysosomal V0 subunit C	BC126881|Atp6v0c-ps2|100039636|ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2
mm9_v1_chr9_-_44728745_44728785	1.87566	FOXD3.p2	BC094407|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	Y17223|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008002|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK011842|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK019343|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	BC086880|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK011038|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK011046|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK005175|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK008087|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	AK009612|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g	BC031384|Atp5l|27425|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
mm9_v1_chr10_-_80363606_80363713	1.87431	FOXD3.p2	AF144702|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	NM_013895|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr11_+_84008939_84008965	1.86997	FOXD3.p2	NM_133360|Acaca|107476|acetyl-Coenzyme A carboxylase alpha	AY451393|Acaca|107476|acetyl-Coenzyme A carboxylase alpha
mm9_v1_chr4_+_97444312_97444317	1.86926	FOXD3.p2	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr9_+_50373472_50373494	1.86718	FOXD3.p2	D49949|Il18|16173|interleukin 18	NM_008360|Il18|16173|interleukin 18	BC024384|Il18|16173|interleukin 18	AY157834|Il18|16173|interleukin 18	AY157835|Il18|16173|interleukin 18
mm9_v1_chr12_+_38607291_38607482	1.86662	FOXD3.p2	AK139408|Dgkb|217480|diacylglycerol kinase, beta	NM_178681|Dgkb|217480|diacylglycerol kinase, beta	AK083222|Dgkb|217480|diacylglycerol kinase, beta	AK047682|Dgkb|217480|diacylglycerol kinase, beta	AK044516|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr10_+_62524324_62524364	1.86537	FOXD3.p2	AK143947|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	AK002802|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	BC019997|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	NM_026701|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1
mm9_v1_chr8_+_88016492_88016583	1.8648	FOXD3.p2	AK075894|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK076250|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK031958|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	AK033424|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2	NM_173866|Gpt2|108682|glutamic pyruvate transaminase (alanine aminotransferase) 2
mm9_v1_chr10_-_75322941_75323054	1.864	FOXD3.p2	AK010691|Mif|17319|macrophage migration inhibitory factor	BC086928|Mif|17319|macrophage migration inhibitory factor	BC100605|Mif|17319|macrophage migration inhibitory factor	L02913|Mif|17319|macrophage migration inhibitory factor	AK152211|Mif|17319|macrophage migration inhibitory factor	BC024895|Mif|17319|macrophage migration inhibitory factor	L10613|Mif|17319|macrophage migration inhibitory factor	AK008939|Mif|17319|macrophage migration inhibitory factor	AK013328|Mif|17319|macrophage migration inhibitory factor	NM_010798|Mif|17319|macrophage migration inhibitory factor
mm9_v1_chr2_+_34729973_34730037	1.86246	FOXD3.p2	AK021330|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	BC021771|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr7_+_103359146_103359146	1.86093	FOXD3.p2	AK147329|Odz4|23966|odd Oz/ten-m homolog 4 (Drosophila)	NM_011858|Odz4|23966|odd Oz/ten-m homolog 4 (Drosophila)
mm9_v1_chr18_+_61204798_61204855	1.85384	FOXD3.p2	BC055311|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_001146268|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	NM_008809|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK143247|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide	AK134785|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide
mm9_v1_chr4_-_62131905_62131926	1.85208	FOXD3.p2	AF274321|Wdr31|71354|WD repeat domain 31	NM_023597|Wdr31|71354|WD repeat domain 31	BC037102|Wdr31|71354|WD repeat domain 31	AK017259|Wdr31|71354|WD repeat domain 31	AK141026|Wdr31|71354|WD repeat domain 31
mm9_v1_chr15_+_7090525_7090548	1.85186	FOXD3.p2	D17444|Lifr|16880|leukemia inhibitory factor receptor	D26177|Lifr|16880|leukemia inhibitory factor receptor	S73495|Lifr|16880|leukemia inhibitory factor receptor	S73496|Lifr|16880|leukemia inhibitory factor receptor	NM_013584|Lifr|16880|leukemia inhibitory factor receptor	BC031929|Lifr|16880|leukemia inhibitory factor receptor
mm9_v1_chr7_-_133521447_133521447	1.84789	FOXD3.p2	NM_023712|Spns1|73658|spinster homolog 1 (Drosophila)
mm9_v1_chr4_+_143002828_143002889	1.84535	FOXD3.p2	AK054398|Pramef8|242736|PRAME family member 8	BC056931|Pramef8|242736|PRAME family member 8
mm9_v1_chr4_+_8462805_8462808	1.84528	FOXD3.p2	AK135421|Rab2a|59021|RAB2A, member RAS oncogene family	AK163320|Rab2a|59021|RAB2A, member RAS oncogene family	AK146179|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr2_-_124949149_124949396	1.8428	FOXD3.p2	BC060946|Myef2|17876|myelin basic protein expression factor 2, repressor	AK129336|Myef2|17876|myelin basic protein expression factor 2, repressor	AK142363|Myef2|17876|myelin basic protein expression factor 2, repressor	AK143230|Myef2|17876|myelin basic protein expression factor 2, repressor	AK048404|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_001162417|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_001162418|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_010852|Myef2|17876|myelin basic protein expression factor 2, repressor	AK012133|Myef2|17876|myelin basic protein expression factor 2, repressor
mm9_v1_chr5_-_100845171_100845280	1.84257	FOXD3.p2	BC043942|Sec31a|69162|Sec31 homolog A (S. cerevisiae)	AK134681|Sec31a|69162|Sec31 homolog A (S. cerevisiae)	AK143455|Sec31a|69162|Sec31 homolog A (S. cerevisiae)	NM_026969|Sec31a|69162|Sec31 homolog A (S. cerevisiae)
mm9_v1_chr16_+_38742365_38742408	1.83623	FOXD3.p2	AK050005|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	NM_019804|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK052013|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK053603|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK085368|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC031115|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF142672|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF158746|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK045602|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK018658|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC013492|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr2_+_65683823_65683911	1.83418	FOXD3.p2	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr6_+_51494591_51494699	1.83085	FOXD3.p2	AK152004|Snx10|71982|sorting nexin 10
mm9_v1_chr10_-_81233886_81233926	1.82217	FOXD3.p2	BC062127|Zfp781|331188|zinc finger protein 781	NM_199062|Zfp781|331188|zinc finger protein 781	AK047840|4933439G19Rik|414080|RIKEN cDNA 4933439G19 gene
mm9_v1_chr10_-_81393224_81393264	1.82217	FOXD3.p2	BC062127|Zfp781|331188|zinc finger protein 781	NM_199062|Zfp781|331188|zinc finger protein 781	AK047840|4933439G19Rik|414080|RIKEN cDNA 4933439G19 gene
mm9_v1_chr7_-_52071930_52072029	1.81945	FOXD3.p2	AF312938|Atf5|107503|activating transcription factor 5	AF375475|Atf5|107503|activating transcription factor 5	BC092068|Atf5|107503|activating transcription factor 5	AF310624|Atf5|107503|activating transcription factor 5	AK131939|Atf5|107503|activating transcription factor 5	AK146479|Atf5|107503|activating transcription factor 5	AK159624|Atf5|107503|activating transcription factor 5
mm9_v1_chr2_+_32477264_32477277	1.81761	FOXD3.p2	DQ486026|Ak1|11636|adenylate kinase 1	AK046613|Ak1|11636|adenylate kinase 1	NM_001198790|Ak1|11636|adenylate kinase 1
mm9_v1_chr2_-_65405546_65405588	1.81666	FOXD3.p2	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr3_-_98314394_98314489	1.81639	FOXD3.p2	NM_001111336|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	BC132402|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	BC013449|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	L16919|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	AK146749|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	NM_008294|Hsd3b4|15495|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4
mm9_v1_chr12_+_89192945_89192962	1.81525	FOXD3.p2	AK145346|Oog1|193322|oogenesin 1	AK087852|Oog1|193322|oogenesin 1	AK135749|Oog1|193322|oogenesin 1	AK139641|Oog1|193322|oogenesin 1	AK143386|Oog1|193322|oogenesin 1	NM_178657|Oog1|193322|oogenesin 1	BC086484|Oog1|193322|oogenesin 1
mm9_v1_chr14_+_120674939_120674954	1.81425	FOXD3.p2	BC079898|Mbnl2|105559|muscleblind-like 2	BC023895|Mbnl2|105559|muscleblind-like 2	AK148740|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr11_-_50108981_50109027	1.81362	FOXD3.p2	AK004422|Canx|12330|calnexin
mm9_v1_chr2_-_120178819_120178881	1.81205	FOXD3.p2	BC007479|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281050|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281051|Vps39|269338|vacuolar protein sorting 39 (yeast)	AB028844|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK141424|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK038824|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK042253|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK154103|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK170831|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK171008|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK159889|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK160109|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK084743|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_147153|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_178851|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK140041|Vps39|269338|vacuolar protein sorting 39 (yeast)
mm9_v1_chr17_+_37006518_37006546	1.81198	FOXD3.p2	NM_011280|Trim10|19824|tripartite motif-containing 10	AK011082|Trim10|19824|tripartite motif-containing 10	AF134811|Trim10|19824|tripartite motif-containing 10	BC051632|Trim10|19824|tripartite motif-containing 10	AF220121|Trim10|19824|tripartite motif-containing 10
mm9_v1_chr11_-_94693315_94693315	1.81006	FOXD3.p2	NM_001163172|Tmem92-ps|544806|transmembrane protein 92, pseudogene
mm9_v1_chr9_-_56008819_56008825	1.80404	FOXD3.p2	AK159418|Tspan3|56434|tetraspanin 3
mm9_v1_chr19_+_53384990_53385011	1.80115	FOXD3.p2	NM_001008542|Mxi1|17859|Max interacting protein 1	AK154538|Mxi1|17859|Max interacting protein 1	BC064453|Mxi1|17859|Max interacting protein 1
mm9_v1_chr7_+_107423813_107423829	1.79785	FOXD3.p2	AK164085|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr15_+_92227240_92227311	1.79686	FOXD3.p2	NM_001164593|Pdzrn4|239618|PDZ domain containing RING finger 4	BC151034|Pdzrn4|239618|PDZ domain containing RING finger 4
mm9_v1_chr16_+_36914313_36914320	1.79616	FOXD3.p2	AK220188|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr10_-_61441817_61441832	1.79511	FOXD3.p2	BC034164|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr8_-_97958738_97958768	1.79071	FOXD3.p2	AK172603|Gtl3|14894|gene trap locus 3	NM_008187|Gtl3|14894|gene trap locus 3
mm9_v1_chr1_-_154233721_154233811	1.7884	FOXD3.p2	AK169429|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC024342|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK004261|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK053666|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK011608|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC145701|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK017650|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_025677|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
mm9_v1_chr9_-_15105965_15105999	1.78688	FOXD3.p2	BC016078|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	NM_133732|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr18_+_61204953_61205094	1.78648	FOXD3.p2	X04367|Pdgfrb|18596|platelet derived growth factor receptor, beta polypeptide
mm9_v1_chr5_-_140290195_140290236	1.78258	FOXD3.p2	BC026659|Tmem184a|231832|transmembrane protein 184a	AK050489|Tmem184a|231832|transmembrane protein 184a	NM_001161548|Tmem184a|231832|transmembrane protein 184a
mm9_v1_chr13_-_58227306_58227430	1.78086	FOXD3.p2	BC048746|Hnrnpa0|77134|heterogeneous nuclear ribonucleoprotein A0
mm9_v1_chr10_-_100051657_100051858	1.77962	FOXD3.p2	AK015251|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK043358|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	BC082587|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK082894|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK032226|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene
mm9_v1_chr7_-_114146118_114146118	1.77858	FOXD3.p2	NM_010983|Olfr2|18317|olfactory receptor 2	S73844|Olfr2|18317|olfactory receptor 2
mm9_v1_chr16_+_20674298_20674336	1.77704	FOXD3.p2	BC021441|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr7_-_28338185_28338214	1.77695	FOXD3.p2	BC076586|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr5_+_115392192_115392243	1.7757	FOXD3.p2	AK135000|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	BC031162|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	NM_028211|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	AK008740|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	AK159360|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene
mm9_v1_chr3_+_66789621_66789657	1.77408	FOXD3.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr16_+_18812381_18812437	1.77243	FOXD3.p2	NM_011672|Ufd1l|22230|ubiquitin fusion degradation 1 like	AK169062|Ufd1l|22230|ubiquitin fusion degradation 1 like	U64445|Ufd1l|22230|ubiquitin fusion degradation 1 like	AK147138|Ufd1l|22230|ubiquitin fusion degradation 1 like	AK010461|Ufd1l|22230|ubiquitin fusion degradation 1 like	AK088823|Ufd1l|22230|ubiquitin fusion degradation 1 like	BC006630|Ufd1l|22230|ubiquitin fusion degradation 1 like
mm9_v1_chr5_+_27143896_27143973	1.77208	FOXD3.p2	AF092507|Dpp6|13483|dipeptidylpeptidase 6	NM_010075|Dpp6|13483|dipeptidylpeptidase 6	AK082186|Dpp6|13483|dipeptidylpeptidase 6
mm9_v1_chr3_+_136566015_136566156	1.77135	FOXD3.p2	AK076570|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr1_+_37947371_37947412	1.77033	FOXD3.p2	AK009074|Mrpl30|107734|mitochondrial ribosomal protein L30	AK089015|Mrpl30|107734|mitochondrial ribosomal protein L30	NM_027098|Mrpl30|107734|mitochondrial ribosomal protein L30
mm9_v1_chr4_+_155205723_155205804	1.76759	FOXD3.p2	AK003442|Aurkaip1|66077|aurora kinase A interacting protein 1	NM_025338|Aurkaip1|66077|aurora kinase A interacting protein 1	AK002737|Aurkaip1|66077|aurora kinase A interacting protein 1	AK158165|Aurkaip1|66077|aurora kinase A interacting protein 1	AK033452|Aurkaip1|66077|aurora kinase A interacting protein 1	AK166049|Aurkaip1|66077|aurora kinase A interacting protein 1	BC011245|Aurkaip1|66077|aurora kinase A interacting protein 1	AK144719|Aurkaip1|66077|aurora kinase A interacting protein 1
mm9_v1_chrX_-_146893563_146893717	1.76137	FOXD3.p2	AK012546|Tmem29|382245|transmembrane protein 29	NM_001164683|Tmem29|382245|transmembrane protein 29
mm9_v1_chr16_+_10742336_10742473	1.7587	FOXD3.p2	AK028051|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr16_+_56477956_56478012	1.75648	FOXD3.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr1_-_173224861_173224966	1.75606	FOXD3.p2	AK011260|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1	AK003070|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1
mm9_v1_chr19_-_58528838_58529066	1.75286	FOXD3.p2	AB000800|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC040251|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC054378|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	NM_010279|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC011532|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AF015172|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr4_+_126291095_126291164	1.74998	FOXD3.p2	AK033039|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene
mm9_v1_chr5_-_121459496_121459582	1.74994	FOXD3.p2	BC042585|Rph3a|19894|rabphilin 3A	NM_011286|Rph3a|19894|rabphilin 3A
mm9_v1_chr18_-_15562126_15562266	1.74924	FOXD3.p2	AK044074|Aqp4|11829|aquaporin 4	BC024526|Aqp4|11829|aquaporin 4	NM_009700|Aqp4|11829|aquaporin 4	AF469168|Aqp4|11829|aquaporin 4
mm9_v1_chr2_-_32942666_32942723	1.74481	FOXD3.p2	BC132143|Garnl3|99326|GTPase activating RANGAP domain-like 3	AK034068|Garnl3|99326|GTPase activating RANGAP domain-like 3	NM_178888|Garnl3|99326|GTPase activating RANGAP domain-like 3
mm9_v1_chr8_+_3515373_3515441	1.74387	FOXD3.p2	AF173829|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_001122818|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_015801|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK040720|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC054789|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC056999|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr12_+_77356412_77356500	1.74384	FOXD3.p2	AK088700|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase	AF364579|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase	AK180541|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
mm9_v1_chr10_+_120471059_120471111	1.74359	FOXD3.p2	AK077698|Wif1|24117|Wnt inhibitory factor 1	AK142443|Wif1|24117|Wnt inhibitory factor 1	AK158359|Wif1|24117|Wnt inhibitory factor 1	NM_011915|Wif1|24117|Wnt inhibitory factor 1
mm9_v1_chr11_+_69778998_69779009	1.74354	FOXD3.p2	BC110485|Cldn7|53624|claudin 7	AK002924|Cldn7|53624|claudin 7	AK010558|Cldn7|53624|claudin 7	AK167250|Cldn7|53624|claudin 7	AK087296|Cldn7|53624|claudin 7	BC050007|Cldn7|53624|claudin 7
mm9_v1_chr6_+_77193078_77193105	1.74334	FOXD3.p2	AK053364|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr7_+_31762061_31762061	1.74145	FOXD3.p2	AK028081|Fam187b|76415|family with sequence similarity 187, member B	BC120864|Fam187b|76415|family with sequence similarity 187, member B	BC125560|Fam187b|76415|family with sequence similarity 187, member B	NM_175240|Fam187b|76415|family with sequence similarity 187, member B
mm9_v1_chr14_-_56830194_56830253	1.74037	FOXD3.p2	X12823|Gzmf|14943|granzyme F	BC145435|Gzmf|14943|granzyme F	BC100311|Gzmf|14943|granzyme F	NM_010374|Gzmf|14943|granzyme F	J03257|Gzmf|14943|granzyme F
mm9_v1_chr12_+_89112519_89112519	1.73622	FOXD3.p2	AK163212|Gm2016|100039042|predicted gene 2016	NM_001122662|Gm2016|100039042|predicted gene 2016
mm9_v1_chrX_-_76880891_76880920	1.73312	FOXD3.p2	AK167347|Mageb16|71967|melanoma antigen family B, 16	BC050207|Mageb16|71967|melanoma antigen family B, 16	NM_001113734|Mageb16|71967|melanoma antigen family B, 16
mm9_v1_chr9_-_56008770_56008818	1.73106	FOXD3.p2	AK159914|Tspan3|56434|tetraspanin 3
mm9_v1_chr1_+_169238780_169238800	1.72744	FOXD3.p2	AK004504|Tmco1|68944|transmembrane and coiled-coil domains 1	NM_001039483|Tmco1|68944|transmembrane and coiled-coil domains 1
mm9_v1_chr4_-_109149038_109149266	1.72373	FOXD3.p2	BC010299|Rnf11|29864|ring finger protein 11	NM_013876|Rnf11|29864|ring finger protein 11	AK014254|Rnf11|29864|ring finger protein 11
mm9_v1_chr9_-_98502063_98502097	1.72359	FOXD3.p2	BC037653|Mrps22|64655|mitochondrial ribosomal protein S22	BC051198|Mrps22|64655|mitochondrial ribosomal protein S22	AK013925|Mrps22|64655|mitochondrial ribosomal protein S22	AK154600|Mrps22|64655|mitochondrial ribosomal protein S22	NM_025485|Mrps22|64655|mitochondrial ribosomal protein S22
mm9_v1_chr7_-_106494110_106494153	1.72181	FOXD3.p2	
mm9_v1_chr3_+_118265066_118265156	1.72105	FOXD3.p2	AK149426|Dpyd|99586|dihydropyrimidine dehydrogenase	NM_170778|Dpyd|99586|dihydropyrimidine dehydrogenase	BC039699|Dpyd|99586|dihydropyrimidine dehydrogenase
mm9_v1_chr4_+_8462823_8462831	1.71801	FOXD3.p2	AK042862|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr1_-_177909236_177909246	1.71545	FOXD3.p2	BC132651|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	BC132653|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	AK139805|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	NM_001039518|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene
mm9_v1_chr17_+_31657059_31657158	1.71503	FOXD3.p2	NM_001083891|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	NM_030087|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK154477|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK018779|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	BC013640|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK077433|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK154191|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3	AK160289|Ndufv3|78330|NADH dehydrogenase (ubiquinone) flavoprotein 3
mm9_v1_chr13_-_101500877_101500928	1.7138	FOXD3.p2	X74145|Cdk7|12572|cyclin-dependent kinase 7	BC068160|Cdk7|12572|cyclin-dependent kinase 7	AK039084|Cdk7|12572|cyclin-dependent kinase 7	AK168286|Cdk7|12572|cyclin-dependent kinase 7	NM_009874|Cdk7|12572|cyclin-dependent kinase 7
mm9_v1_chr17_-_45570469_45570504	1.70973	FOXD3.p2	BC003893|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150562|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150861|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK146892|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK172950|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr7_-_109069245_109069287	1.70851	FOXD3.p2	EU627089|Lrrc51|69358|leucine rich repeat containing 51	EU627090|Lrrc51|69358|leucine rich repeat containing 51	NM_001162974|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr16_-_57754816_57754849	1.70846	FOXD3.p2	BC011061|Col8a1|12837|collagen, type VIII, alpha 1	BC058281|Col8a1|12837|collagen, type VIII, alpha 1	AK159542|Col8a1|12837|collagen, type VIII, alpha 1	AK029203|Col8a1|12837|collagen, type VIII, alpha 1	AK018742|Col8a1|12837|collagen, type VIII, alpha 1	AK032048|Col8a1|12837|collagen, type VIII, alpha 1	AK046370|Col8a1|12837|collagen, type VIII, alpha 1	NM_007739|Col8a1|12837|collagen, type VIII, alpha 1
mm9_v1_chr12_+_99866348_99866525	1.70836	FOXD3.p2	AK036359|Spata7|104871|spermatogenesis associated 7	AK169473|Spata7|104871|spermatogenesis associated 7	AK045704|Spata7|104871|spermatogenesis associated 7	AK153698|Spata7|104871|spermatogenesis associated 7	BC046960|Spata7|104871|spermatogenesis associated 7	NM_178914|Spata7|104871|spermatogenesis associated 7	AK161308|Spata7|104871|spermatogenesis associated 7	AK077500|Spata7|104871|spermatogenesis associated 7	DQ196101|Spata7|104871|spermatogenesis associated 7
mm9_v1_chr9_-_117160916_117161040	1.7068	FOXD3.p2	BC117840|Rbms3|207181|RNA binding motif, single stranded interacting protein	BC117841|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr10_+_126857922_126857922	1.70661	FOXD3.p2	AK043545|R3hdm2|71750|R3H domain containing 2	NM_001168293|R3hdm2|71750|R3H domain containing 2	NM_027900|R3hdm2|71750|R3H domain containing 2
mm9_v1_chr3_-_116671720_116671775	1.70636	FOXD3.p2	AK136939|Palmd|114301|palmdelphin
mm9_v1_chr4_+_134479504_134479540	1.69961	FOXD3.p2	AK028145|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK003799|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK012363|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150024|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK160993|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169598|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169760|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	NM_023665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK029529|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr5_-_8367951_8368174	1.69862	FOXD3.p2	BC117707|Adam22|11496|a disintegrin and metallopeptidase domain 22	BC117708|Adam22|11496|a disintegrin and metallopeptidase domain 22	HM004095|Adam22|11496|a disintegrin and metallopeptidase domain 22	AB009674|Adam22|11496|a disintegrin and metallopeptidase domain 22	AK082335|Adam22|11496|a disintegrin and metallopeptidase domain 22	NM_001007220|Adam22|11496|a disintegrin and metallopeptidase domain 22	NM_001007221|Adam22|11496|a disintegrin and metallopeptidase domain 22	NM_001098225|Adam22|11496|a disintegrin and metallopeptidase domain 22	AK042962|Adam22|11496|a disintegrin and metallopeptidase domain 22
mm9_v1_chr1_+_173144098_173144105	1.69598	FOXD3.p2	AK133515|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	NM_009803|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr7_+_120909625_120909653	1.69496	FOXD3.p2	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr17_+_19190456_19190456	1.69139	FOXD3.p2	NM_001104550|Vmn2r98|224552|vomeronasal 2, receptor 98
mm9_v1_chr5_+_53225253_53225293	1.69097	FOXD3.p2	AK166061|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr14_-_31166671_31166671	1.69041	FOXD3.p2	AK147415|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_001083616|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr17_-_46462714_46462714	1.6896	FOXD3.p2	AF406642|Abcc10|224814|ATP-binding cassette, sub-family C (CFTR/MRP), member 10	NM_145140|Abcc10|224814|ATP-binding cassette, sub-family C (CFTR/MRP), member 10
mm9_v1_chr18_+_22503589_22503589	1.68372	FOXD3.p2	AK082659|Asxl3|211961|additional sex combs like 3 (Drosophila)	NM_001167777|Asxl3|211961|additional sex combs like 3 (Drosophila)
mm9_v1_chr12_+_85455277_85455306	1.68253	FOXD3.p2	NM_028821|Dnalc1|105000|dynein, axonemal, light chain 1
mm9_v1_chr18_+_65183180_65183324	1.68237	FOXD3.p2	NM_031881|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr18_+_37673305_37673473	1.68102	FOXD3.p2	AK134846|Pcdhb21|93892|protocadherin beta 21	NM_053146|Pcdhb21|93892|protocadherin beta 21	BC138121|Pcdhb21|93892|protocadherin beta 21	BC138122|Pcdhb21|93892|protocadherin beta 21	AF326314|Pcdhb21|93892|protocadherin beta 21	AY013783|Pcdhb21|93892|protocadherin beta 21
mm9_v1_chr4_-_116494091_116494112	1.67858	FOXD3.p2	AK049217|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	AK043902|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	AK078929|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like	NM_146256|Hpdl|242642|4-hydroxyphenylpyruvate dioxygenase-like
mm9_v1_chr7_-_26460180_26460184	1.67706	FOXD3.p2	AK079312|Tmem91|320208|transmembrane protein 91	NM_177102|Tmem91|320208|transmembrane protein 91
mm9_v1_chr10_+_90564953_90564975	1.66441	FOXD3.p2	AK209988|Ikbip|67454|IKBKB interacting protein
mm9_v1_chr4_+_8462766_8462804	1.66293	FOXD3.p2	AK159607|Rab2a|59021|RAB2A, member RAS oncogene family	AK079071|Rab2a|59021|RAB2A, member RAS oncogene family	AK160333|Rab2a|59021|RAB2A, member RAS oncogene family	NM_021518|Rab2a|59021|RAB2A, member RAS oncogene family	BC058382|Rab2a|59021|RAB2A, member RAS oncogene family	X95403|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr4_-_109149274_109149287	1.66066	FOXD3.p2	BC028255|Rnf11|29864|ring finger protein 11
mm9_v1_chr19_-_5797749_5797761	1.65462	FOXD3.p2	AK141413|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr4_+_15808409_15808487	1.65397	FOXD3.p2	AK002635|Calb1|12307|calbindin 1	AK005081|Calb1|12307|calbindin 1	AK005243|Calb1|12307|calbindin 1	AK028050|Calb1|12307|calbindin 1	AK038856|Calb1|12307|calbindin 1	AK048517|Calb1|12307|calbindin 1	AK077499|Calb1|12307|calbindin 1	NM_009788|Calb1|12307|calbindin 1	AK028327|Calb1|12307|calbindin 1	AK078358|Calb1|12307|calbindin 1	M21531|Calb1|12307|calbindin 1	BC016421|Calb1|12307|calbindin 1
mm9_v1_chr11_+_29607599_29607721	1.65318	FOXD3.p2	AB073672|Rtn4|68585|reticulon 4
mm9_v1_chr14_-_16271386_16271500	1.65277	FOXD3.p2	AK043406|Lrrc3b|218763|leucine rich repeat containing 3B	NM_146052|Lrrc3b|218763|leucine rich repeat containing 3B
mm9_v1_chr2_+_173348092_173348148	1.65165	FOXD3.p2	NM_028158|1700021F07Rik|72221|RIKEN cDNA 1700021F07 gene	BC050790|1700021F07Rik|72221|RIKEN cDNA 1700021F07 gene	AK006200|1700021F07Rik|72221|RIKEN cDNA 1700021F07 gene
mm9_v1_chr16_+_45094163_45094171	1.65012	FOXD3.p2	AK132178|Ccdc80|67896|coiled-coil domain containing 80	NM_026439|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr4_-_143802891_143802919	1.64811	FOXD3.p2	BC094895|C87977|97187|expressed sequence C87977	AK139502|C87977|97187|expressed sequence C87977	NM_001177542|C87977|97187|expressed sequence C87977
mm9_v1_chr11_+_104411976_104411976	1.64796	FOXD3.p2	BC048485|Myl4|17896|myosin, light polypeptide 4	NM_010858|Myl4|17896|myosin, light polypeptide 4
mm9_v1_chr2_+_33097791_33097802	1.64725	FOXD3.p2	AK187902|Angptl2|26360|angiopoietin-like 2	AK205240|Angptl2|26360|angiopoietin-like 2	AK214337|Angptl2|26360|angiopoietin-like 2
mm9_v1_chr2_+_127034072_127034128	1.64643	FOXD3.p2	AK081920|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	AK149291|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)
mm9_v1_chr10_+_116018336_116018351	1.64569	FOXD3.p2	AK077360|5330438D12Rik|327824|RIKEN cDNA 5330438D12 gene
mm9_v1_chr11_-_115158717_115158977	1.64425	FOXD3.p2	BC044804|Fads6|328035|fatty acid desaturase domain family, member 6	BC132041|Fads6|328035|fatty acid desaturase domain family, member 6	BC132067|Fads6|328035|fatty acid desaturase domain family, member 6	AB087503|Fads6|328035|fatty acid desaturase domain family, member 6	NM_178035|Fads6|328035|fatty acid desaturase domain family, member 6	BC050213|Fads6|328035|fatty acid desaturase domain family, member 6
mm9_v1_chr10_-_75931858_75931858	1.64207	FOXD3.p2	BC057308|Ybey|216119|ybeY metallopeptidase	NM_172550|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr9_+_20692618_20692740	1.64065	FOXD3.p2	NM_145610|Ppan|235036|peter pan homolog (Drosophila)	BC014688|Ppan|235036|peter pan homolog (Drosophila)	AK085695|Ppan|235036|peter pan homolog (Drosophila)	AK039027|Ppan|235036|peter pan homolog (Drosophila)	AK172615|Ppan|235036|peter pan homolog (Drosophila)	AK171672|Ppan|235036|peter pan homolog (Drosophila)	BC059277|Ppan|235036|peter pan homolog (Drosophila)
mm9_v1_chr12_-_110131406_110131420	1.63702	FOXD3.p2	BC003450|Wars|22375|tryptophanyl-tRNA synthetase	AK004541|Wars|22375|tryptophanyl-tRNA synthetase	NM_001164488|Wars|22375|tryptophanyl-tRNA synthetase	NM_011710|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr14_-_70107206_70107408	1.63537	FOXD3.p2	BC052536|R3hcc1|71843|R3H domain and coiled-coil containing 1	BC059860|R3hcc1|71843|R3H domain and coiled-coil containing 1	AK032854|R3hcc1|71843|R3H domain and coiled-coil containing 1	AK156843|R3hcc1|71843|R3H domain and coiled-coil containing 1	NM_001146012|R3hcc1|71843|R3H domain and coiled-coil containing 1
mm9_v1_chr10_-_77472501_77472567	1.62956	FOXD3.p2	NM_008826|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr10_+_33577526_33577529	1.62853	FOXD3.p2	AF026075|Sult3a1|57430|sulfotransferase family 3A, member 1	BC125593|Sult3a1|57430|sulfotransferase family 3A, member 1	BC125595|Sult3a1|57430|sulfotransferase family 3A, member 1	NM_020565|Sult3a1|57430|sulfotransferase family 3A, member 1
mm9_v1_chr3_+_59835700_59835727	1.62818	FOXD3.p2	NM_023383|Aadac|67758|arylacetamide deacetylase (esterase)	AK008244|Aadac|67758|arylacetamide deacetylase (esterase)	BC054823|Aadac|67758|arylacetamide deacetylase (esterase)	BC019999|Aadac|67758|arylacetamide deacetylase (esterase)
mm9_v1_chr17_+_37095536_37095635	1.62711	FOXD3.p2	BC027007|Znrd1as|76416|ZNRD1 antisense RNA	NM_029602|Znrd1as|76416|ZNRD1 antisense RNA	AK006236|Znrd1as|76416|ZNRD1 antisense RNA	AK161503|Znrd1as|76416|ZNRD1 antisense RNA
mm9_v1_chr1_+_174078258_174078296	1.62568	FOXD3.p2	AK167059|Dcaf8|98193|DDB1 and CUL4 associated factor 8	BC023804|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK209691|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK098114|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chrX_+_159215702_159215711	1.62215	FOXD3.p2	AK213484|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr10_-_80477630_80477676	1.61779	FOXD3.p2	AK147843|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	AK141541|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	AK177829|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	AY035844|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7	NM_010319|Gng7|14708|guanine nucleotide binding protein (G protein), gamma 7
mm9_v1_chr17_-_33855557_33855658	1.61775	FOXD3.p2	BC002144|March2|224703|membrane-associated ring finger (C3HC4) 2	AK053434|March2|224703|membrane-associated ring finger (C3HC4) 2	AK079234|March2|224703|membrane-associated ring finger (C3HC4) 2	AK081495|March2|224703|membrane-associated ring finger (C3HC4) 2	AK036614|March2|224703|membrane-associated ring finger (C3HC4) 2	AK039778|March2|224703|membrane-associated ring finger (C3HC4) 2	AK040163|March2|224703|membrane-associated ring finger (C3HC4) 2	NM_145486|March2|224703|membrane-associated ring finger (C3HC4) 2
mm9_v1_chr8_-_42140113_42140147	1.61376	FOXD3.p2	BC043321|Mtus1|102103|mitochondrial tumor suppressor 1	AK043214|Mtus1|102103|mitochondrial tumor suppressor 1	AY626782|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005864|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr17_-_40379205_40379215	1.61293	FOXD3.p2	BC132536|Crisp3|11572|cysteine-rich secretory protein 3	BC132538|Crisp3|11572|cysteine-rich secretory protein 3	L05560|Crisp3|11572|cysteine-rich secretory protein 3	NM_009639|Crisp3|11572|cysteine-rich secretory protein 3	BC114345|Crisp3|11572|cysteine-rich secretory protein 3	M92850|Crisp3|11572|cysteine-rich secretory protein 3	BC022573|Crisp3|11572|cysteine-rich secretory protein 3
mm9_v1_chr7_+_19589395_19589469	1.61246	FOXD3.p2	AK087457|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK031834|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	BC036162|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	NM_178757|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1	AK032010|Irf2bp1|272359|interferon regulatory factor 2 binding protein 1
mm9_v1_chr9_+_109719158_109719169	1.60788	FOXD3.p2	AK021276|Spink8|78709|serine peptidase inhibitor, Kazal type 8	DQ437329|Spink8|78709|serine peptidase inhibitor, Kazal type 8
mm9_v1_chr10_-_127735123_127735139	1.60756	FOXD3.p2	BC019953|Il23a|83430|interleukin 23, alpha subunit p19	AF301619|Il23a|83430|interleukin 23, alpha subunit p19	NM_031252|Il23a|83430|interleukin 23, alpha subunit p19
mm9_v1_chr1_-_164914621_164914660	1.60477	FOXD3.p2	NM_008030|Fmo3|14262|flavin containing monooxygenase 3	U87147|Fmo3|14262|flavin containing monooxygenase 3	AK149440|Fmo3|14262|flavin containing monooxygenase 3	AK050123|Fmo3|14262|flavin containing monooxygenase 3
mm9_v1_chr12_+_112783003_112783121	1.60408	FOXD3.p2	AK218038|Eif5|217869|eukaryotic translation initiation factor 5
mm9_v1_chr16_-_23890909_23890942	1.60141	FOXD3.p2	BC010770|Sst|20604|somatostatin	AK003014|Sst|20604|somatostatin	NM_009215|Sst|20604|somatostatin
mm9_v1_chr4_-_115747643_115747689	1.59801	FOXD3.p2	AK012552|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK018712|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	NM_025641|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr6_+_30491641_30491643	1.59534	FOXD3.p2	NM_001024698|Cpa2|232680|carboxypeptidase A2, pancreatic
mm9_v1_chr18_+_35989376_35989483	1.59493	FOXD3.p2	AK005364|Cxxc5|67393|CXXC finger 5	BC089314|Cxxc5|67393|CXXC finger 5	NM_133687|Cxxc5|67393|CXXC finger 5
mm9_v1_chrX_+_135751704_135751704	1.59475	FOXD3.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr1_+_57902414_57902414	1.59241	FOXD3.p2	BC014764|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	NM_001164566|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr9_+_109719138_109719140	1.59222	FOXD3.p2	BC048588|Spink8|78709|serine peptidase inhibitor, Kazal type 8	NM_183136|Spink8|78709|serine peptidase inhibitor, Kazal type 8
mm9_v1_chr9_+_15309938_15309938	1.5856	FOXD3.p2	AF197136|BC017612|170748|cDNA sequence BC017612	NM_133214|BC017612|170748|cDNA sequence BC017612
mm9_v1_chr14_+_118559355_118559360	1.58274	FOXD3.p2	AK040165|Gpr180|58245|G protein-coupled receptor 180
mm9_v1_chrX_+_20937988_20937991	1.58236	FOXD3.p2	AK032684|Gm5124|331392|predicted pseudogene 5124	NM_198633|Gm5124|331392|predicted pseudogene 5124
mm9_v1_chr11_-_110029368_110029491	1.58146	FOXD3.p2	AK028451|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9	AK085555|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9	AF491299|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9	NM_147220|Abca9|217262|ATP-binding cassette, sub-family A (ABC1), member 9
mm9_v1_chr10_+_27794625_27794662	1.58066	FOXD3.p2	NM_008983|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	AK078614|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	BC138376|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	BC145261|Ptprk|19272|protein tyrosine phosphatase, receptor type, K	AK083006|Ptprk|19272|protein tyrosine phosphatase, receptor type, K
mm9_v1_chr15_+_82176533_82176625	1.57973	FOXD3.p2	
mm9_v1_chr11_-_118151298_118151557	1.579	FOXD3.p2	AK129363|Usp36|72344|ubiquitin specific peptidase 36	AK079342|Usp36|72344|ubiquitin specific peptidase 36	AK165635|Usp36|72344|ubiquitin specific peptidase 36	AK049205|Usp36|72344|ubiquitin specific peptidase 36	AK028572|Usp36|72344|ubiquitin specific peptidase 36	NM_001033528|Usp36|72344|ubiquitin specific peptidase 36
mm9_v1_chr6_+_139535757_139535771	1.57829	FOXD3.p2	BC099684|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AB008791|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	BC150813|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	NM_207683|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm9_v1_chr8_+_96335202_96335227	1.57726	FOXD3.p2	M36778|Gnao1|14681|guanine nucleotide binding protein, alpha O	M36777|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr2_-_10052196_10052339	1.57288	FOXD3.p2	AK133782|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	BC034341|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	X70392|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	NM_010582|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2
mm9_v1_chr9_+_32072243_32072249	1.57208	FOXD3.p2	AK014385|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr2_-_32136262_32136304	1.57194	FOXD3.p2	
mm9_v1_chr2_-_77357674_77357722	1.56966	FOXD3.p2	AK078551|Zfp385b|241494|zinc finger protein 385B	AK050293|Zfp385b|241494|zinc finger protein 385B	NM_001113400|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr14_-_125076242_125076348	1.56891	FOXD3.p2	BC107003|Fgf14|14169|fibroblast growth factor 14	BC107004|Fgf14|14169|fibroblast growth factor 14	AK079100|Fgf14|14169|fibroblast growth factor 14	NM_207667|Fgf14|14169|fibroblast growth factor 14
mm9_v1_chr2_+_28323580_28323619	1.56709	FOXD3.p2	AK051184|Mrps2|118451|mitochondrial ribosomal protein S2	AK172120|Mrps2|118451|mitochondrial ribosomal protein S2	NM_001166031|Mrps2|118451|mitochondrial ribosomal protein S2	NM_080452|Mrps2|118451|mitochondrial ribosomal protein S2	AK154131|Mrps2|118451|mitochondrial ribosomal protein S2	AB055389|Mrps2|118451|mitochondrial ribosomal protein S2	AK160129|Mrps2|118451|mitochondrial ribosomal protein S2	AK165956|Mrps2|118451|mitochondrial ribosomal protein S2	AK156412|Mrps2|118451|mitochondrial ribosomal protein S2	AK171699|Mrps2|118451|mitochondrial ribosomal protein S2	AK172432|Mrps2|118451|mitochondrial ribosomal protein S2	BC048377|Mrps2|118451|mitochondrial ribosomal protein S2	BC033460|Mrps2|118451|mitochondrial ribosomal protein S2	BC060503|Mrps2|118451|mitochondrial ribosomal protein S2
mm9_v1_chr5_+_138882703_138882746	1.56436	FOXD3.p2	NM_028130|Zfp157|72154|zinc finger protein 157	AK042470|Zfp157|72154|zinc finger protein 157	BC059261|Zfp157|72154|zinc finger protein 157	AK083851|Zfp157|72154|zinc finger protein 157	BC049676|Zfp157|72154|zinc finger protein 157	AK028290|Zfp157|72154|zinc finger protein 157
mm9_v1_chr6_-_21802087_21802170	1.56396	FOXD3.p2	BC065152|Tspan12|269831|tetraspanin 12	AK033554|Tspan12|269831|tetraspanin 12	BC068240|Tspan12|269831|tetraspanin 12
mm9_v1_chr17_+_46247928_46248012	1.55963	FOXD3.p2	AB049953|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK003444|Mrps18a|68565|mitochondrial ribosomal protein S18A	NM_026768|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK028226|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK172171|Mrps18a|68565|mitochondrial ribosomal protein S18A	BC058959|Mrps18a|68565|mitochondrial ribosomal protein S18A
mm9_v1_chrX_-_34442837_34442864	1.55915	FOXD3.p2	AK020455|Nkrf|77286|NF-kappaB repressing factor	BC138828|Nkrf|77286|NF-kappaB repressing factor	BC138829|Nkrf|77286|NF-kappaB repressing factor
mm9_v1_chr2_+_84820615_84820637	1.55911	FOXD3.p2	AK156715|Prg2|19074|proteoglycan 2, bone marrow	AK010901|Prg2|19074|proteoglycan 2, bone marrow	NM_008920|Prg2|19074|proteoglycan 2, bone marrow	BC109348|Prg2|19074|proteoglycan 2, bone marrow
mm9_v1_chr17_-_13102778_13102865	1.55832	FOXD3.p2	BC158033|Pnldc1|240023|poly(A)-specific ribonuclease (PARN)-like domain containing 1	BC172002|Pnldc1|240023|poly(A)-specific ribonuclease (PARN)-like domain containing 1	NM_001034866|Pnldc1|240023|poly(A)-specific ribonuclease (PARN)-like domain containing 1
mm9_v1_chr1_+_12708582_12708625	1.55779	FOXD3.p2	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr14_+_66963139_66963219	1.55624	FOXD3.p2	BC014707|Stmn4|56471|stathmin-like 4	BC046752|Stmn4|56471|stathmin-like 4	NM_019675|Stmn4|56471|stathmin-like 4
mm9_v1_chr16_-_16358625_16358644	1.55455	FOXD3.p2	AK154123|Dnm1l|74006|dynamin 1-like	BC040777|Dnm1l|74006|dynamin 1-like
mm9_v1_chr12_+_37040755_37040991	1.5404	FOXD3.p2	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chr3_+_54916066_54916113	1.53614	FOXD3.p2	AK147760|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_001144987|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm9_v1_chr10_+_84849558_84849599	1.53559	FOXD3.p2	BC096535|Btbd11|74007|BTB (POZ) domain containing 11	NM_028709|Btbd11|74007|BTB (POZ) domain containing 11
mm9_v1_chr11_+_115243203_115243359	1.5332	FOXD3.p2	NM_001080929|Cdr2l|237988|cerebellar degeneration-related protein 2-like	BC144823|Cdr2l|237988|cerebellar degeneration-related protein 2-like	BC150668|Cdr2l|237988|cerebellar degeneration-related protein 2-like
mm9_v1_chr5_-_118605391_118605453	1.53298	FOXD3.p2	AK034447|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047756|Fbxw8|231672|F-box and WD-40 domain protein 8	BC009095|Fbxw8|231672|F-box and WD-40 domain protein 8	AK047695|Fbxw8|231672|F-box and WD-40 domain protein 8
mm9_v1_chr4_-_126738303_126738384	1.53276	FOXD3.p2	BC064774|Zmym1|68310|zinc finger, MYM domain containing 1	AK138687|Zmym1|68310|zinc finger, MYM domain containing 1	AK166769|Zmym1|68310|zinc finger, MYM domain containing 1	AK049568|Zmym1|68310|zinc finger, MYM domain containing 1	AK035618|Zmym1|68310|zinc finger, MYM domain containing 1	NM_026670|Zmym1|68310|zinc finger, MYM domain containing 1	AK167508|Zmym1|68310|zinc finger, MYM domain containing 1	AK016783|Zmym1|68310|zinc finger, MYM domain containing 1	AK044538|Zmym1|68310|zinc finger, MYM domain containing 1
mm9_v1_chr1_-_173465366_173465415	1.53244	FOXD3.p2	BC150795|Itln1|16429|intelectin 1 (galactofuranose binding)	AY157363|Itln1|16429|intelectin 1 (galactofuranose binding)	AY157364|Itln1|16429|intelectin 1 (galactofuranose binding)	AY619693|Itln1|16429|intelectin 1 (galactofuranose binding)
mm9_v1_chr4_+_126354857_126354998	1.53196	FOXD3.p2	NM_011970|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK078487|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK164463|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	BC008265|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AF060090|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2
mm9_v1_chr10_+_120471255_120471291	1.52958	FOXD3.p2	BC013268|Wif1|24117|Wnt inhibitory factor 1	AF122923|Wif1|24117|Wnt inhibitory factor 1
mm9_v1_chr11_-_120410992_120411040	1.52254	FOXD3.p2	BC025536|Fam195b|192173|family with sequence similarity 195, member B	AK147780|Fam195b|192173|family with sequence similarity 195, member B	NM_001033231|Fam195b|192173|family with sequence similarity 195, member B
mm9_v1_chr9_-_30978164_30978202	1.52067	FOXD3.p2	AK190965|Aplp2|11804|amyloid beta (A4) precursor-like protein 2	M97216|Aplp2|11804|amyloid beta (A4) precursor-like protein 2
mm9_v1_chr1_+_66368571_66368671	1.51818	FOXD3.p2	AK046341|Mtap2|17756|microtubule-associated protein 2	AK086484|Mtap2|17756|microtubule-associated protein 2	M21041|Mtap2|17756|microtubule-associated protein 2	AK141458|Mtap2|17756|microtubule-associated protein 2
mm9_v1_chr17_+_86577946_86578063	1.51788	FOXD3.p2	
mm9_v1_chr7_+_52317798_52317879	1.51426	FOXD3.p2	NM_001163684|Nosip|66394|nitric oxide synthase interacting protein	NM_025533|Nosip|66394|nitric oxide synthase interacting protein	AK007962|Nosip|66394|nitric oxide synthase interacting protein	AK010006|Nosip|66394|nitric oxide synthase interacting protein	BC089029|Nosip|66394|nitric oxide synthase interacting protein	AK076736|Nosip|66394|nitric oxide synthase interacting protein
mm9_v1_chrX_+_93651684_93651766	1.514	FOXD3.p2	NM_001159627|Heph|15203|hephaestin	NM_181273|Heph|15203|hephaestin	AK081330|Heph|15203|hephaestin	AK129194|Heph|15203|hephaestin	AK032895|Heph|15203|hephaestin	AK086923|Heph|15203|hephaestin
mm9_v1_chr17_+_41097513_41097693	1.5116	FOXD3.p2	AK029425|Mut|17850|methylmalonyl-Coenzyme A mutase	AK012766|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr7_-_148086341_148086344	1.51084	FOXD3.p2	NM_007751|Cox8b|12869|cytochrome c oxidase, subunit VIIIb
mm9_v1_chrX_-_100049954_100049954	1.50471	FOXD3.p2	AK016891|Dmrtc1c|71083|DMRT-like family C1c	NM_001142690|Dmrtc1c2|668357|DMRT-like family C1c2	NM_001142691|Dmrtc1c|71083|DMRT-like family C1c
mm9_v1_chr3_+_137940628_137940681	1.50313	FOXD3.p2	BC054467|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr3_+_66789859_66789903	1.50259	FOXD3.p2	BC043045|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr11_-_103815361_103815405	1.50159	FOXD3.p2	BC006627|Nsf|18195|N-ethylmaleimide sensitive fusion protein	NM_008740|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr5_-_145927883_145927892	1.49934	FOXD3.p2	AK088764|Ptcd1|71799|pentatricopeptide repeat domain 1	BC004766|Ptcd1|71799|pentatricopeptide repeat domain 1
mm9_v1_chr16_-_36784864_36785047	1.4987	FOXD3.p2	BC018335|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK128939|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AK018393|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138627|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC138628|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	BC051199|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	AF111811|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_001145899|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2	NM_021301|Slc15a2|57738|solute carrier family 15 (H+/peptide transporter), member 2
mm9_v1_chr3_+_135488454_135488592	1.49702	FOXD3.p2	AK028215|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_026228|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	AK016853|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr11_-_99250663_99250679	1.49619	FOXD3.p2	AK014360|Krt10|16661|keratin 10	V00830|Krt10|16661|keratin 10	AK076508|Krt10|16661|keratin 10	AK081914|Krt10|16661|keratin 10	AK081402|Krt10|16661|keratin 10	NM_010660|Krt10|16661|keratin 10
mm9_v1_chr18_+_30432499_30432592	1.49601	FOXD3.p2	AK030578|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC024675|Pik3c3|225326|phosphoinositide-3-kinase, class 3	NM_181414|Pik3c3|225326|phosphoinositide-3-kinase, class 3	AK044997|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC057678|Pik3c3|225326|phosphoinositide-3-kinase, class 3	BC027029|Pik3c3|225326|phosphoinositide-3-kinase, class 3
mm9_v1_chr13_+_49063750_49063790	1.49524	FOXD3.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr7_+_119902897_119902956	1.49518	FOXD3.p2	NM_001166585|Tead1|21676|TEA domain family member 1	L06865|Tead1|21676|TEA domain family member 1	BC052021|Tead1|21676|TEA domain family member 1	BC060138|Tead1|21676|TEA domain family member 1
mm9_v1_chr7_-_28338127_28338176	1.49464	FOXD3.p2	BC068170|Pld3|18807|phospholipase D family, member 3	AF026124|Pld3|18807|phospholipase D family, member 3	NM_011116|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr11_+_109334649_109334687	1.4929	FOXD3.p2	AK158726|Arsg|74008|arylsulfatase G	NM_028710|Arsg|74008|arylsulfatase G
mm9_v1_chr15_+_81702875_81703029	1.49066	FOXD3.p2	NM_080633|Aco2|11429|aconitase 2, mitochondrial	AK143917|Aco2|11429|aconitase 2, mitochondrial	AK145511|Aco2|11429|aconitase 2, mitochondrial	AK150027|Aco2|11429|aconitase 2, mitochondrial	AK150954|Aco2|11429|aconitase 2, mitochondrial	AK165411|Aco2|11429|aconitase 2, mitochondrial	BC094462|Aco2|11429|aconitase 2, mitochondrial	AK029122|LOC100504340|100504340|hypothetical protein LOC100504340
mm9_v1_chr11_-_61680770_61680775	1.49034	FOXD3.p2	AK138613|A530017D24Rik|103880|RIKEN cDNA A530017D24 gene
mm9_v1_chr7_-_77511607_77511666	1.49034	FOXD3.p2	BC094360|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_183261|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr7_+_135888383_135888523	1.49026	FOXD3.p2	NM_001029982|Sec23ip|207352|Sec23 interacting protein	AK048053|Sec23ip|207352|Sec23 interacting protein	BC098506|Sec23ip|207352|Sec23 interacting protein
mm9_v1_chr7_+_4744521_4744617	1.4893	FOXD3.p2	X74856|Rpl28|19943|ribosomal protein L28	BC086932|Rpl28|19943|ribosomal protein L28	AK012368|Rpl28|19943|ribosomal protein L28	AK018714|Rpl28|19943|ribosomal protein L28	AK076133|Rpl28|19943|ribosomal protein L28	BC092012|Rpl28|19943|ribosomal protein L28	NM_009081|Rpl28|19943|ribosomal protein L28	BC024395|Rpl28|19943|ribosomal protein L28	BC086797|Rpl28|19943|ribosomal protein L28
mm9_v1_chr7_-_26460133_26460159	1.48456	FOXD3.p2	BC058996|Tmem91|320208|transmembrane protein 91	AK043858|Tmem91|320208|transmembrane protein 91	AK086094|Tmem91|320208|transmembrane protein 91
mm9_v1_chr9_+_54434140_54434327	1.4845	FOXD3.p2	AK158646|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK159051|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK117103|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK152353|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK159666|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK160054|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK150618|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK164038|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK168149|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK167822|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK151304|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK153459|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK168049|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK010065|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK032787|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK047951|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK168034|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK084523|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	BC049956|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	NM_029573|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	AK169152|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha	BC034273|Idh3a|67834|isocitrate dehydrogenase 3 (NAD+) alpha
mm9_v1_chr11_-_101026399_101026436	1.47999	FOXD3.p2	AK052371|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr11_-_120509650_120509650	1.47702	FOXD3.p2	NM_026751|Myadml2|68515|myeloid-associated differentiation marker-like 2
mm9_v1_chr1_+_173144116_173144124	1.47692	FOXD3.p2	AK149430|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr3_+_122598292_122598309	1.47662	FOXD3.p2	AK007995|Fabp2|14079|fatty acid binding protein 2, intestinal	M65034|Fabp2|14079|fatty acid binding protein 2, intestinal	AY523818|Fabp2|14079|fatty acid binding protein 2, intestinal	AY523819|Fabp2|14079|fatty acid binding protein 2, intestinal	BC013457|Fabp2|14079|fatty acid binding protein 2, intestinal	NM_007980|Fabp2|14079|fatty acid binding protein 2, intestinal
mm9_v1_chr2_+_145647868_145648056	1.46992	FOXD3.p2	AK152893|Rin2|74030|Ras and Rab interactor 2	AK150680|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr9_-_53475563_53475590	1.4698	FOXD3.p2	BC019661|Cul5|75717|cullin 5	AK046030|Cul5|75717|cullin 5
mm9_v1_chr2_-_110203298_110203336	1.46841	FOXD3.p2	AK011548|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK012026|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr4_-_4720451_4720507	1.46716	FOXD3.p2	BC048776|Impad1|242291|inositol monophosphatase domain containing 1	NM_177730|Impad1|242291|inositol monophosphatase domain containing 1	AK045511|Impad1|242291|inositol monophosphatase domain containing 1
mm9_v1_chr5_+_120120870_120121055	1.46686	FOXD3.p2	BC096551|Tbx3|21386|T-box 3	AK052453|Tbx3|21386|T-box 3
mm9_v1_chr13_+_83803830_83803849	1.4664	FOXD3.p2	AK044589|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr19_-_27463532_27463668	1.46029	FOXD3.p2	
mm9_v1_chr12_-_89420210_89420337	1.45925	FOXD3.p2	BC094894|Gm10436|100039315|predicted gene 10436	AK139576|Gm10436|100039315|predicted gene 10436	NM_001105254|Gm10436|100039315|predicted gene 10436
mm9_v1_chr10_+_62849310_62849422	1.45823	FOXD3.p2	NM_013888|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AK032207|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AF132906|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC013501|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC071211|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12
mm9_v1_chr16_+_36221553_36221647	1.45794	FOXD3.p2	AK008122|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	BC125396|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	BC125422|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	BC145264|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene	NM_029733|2010005H15Rik|76770|RIKEN cDNA 2010005H15 gene
mm9_v1_chr2_-_173053287_173053316	1.45765	FOXD3.p2	AK077382|Pmepa1|65112|prostate transmembrane protein, androgen induced 1
mm9_v1_chr5_+_135845811_135845865	1.45685	FOXD3.p2	AK079400|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	NM_145414|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK156651|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AF412029|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5	AK149521|Nsun5|100609|NOL1/NOP2/Sun domain family, member 5
mm9_v1_chr4_-_14753720_14753733	1.45656	FOXD3.p2	NM_152812|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr1_-_36301093_36301156	1.45542	FOXD3.p2	BC062936|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	BC068283|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK050532|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	NM_198899|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr14_-_67422871_67422921	1.45504	FOXD3.p2	AK084113|Dpysl2|12934|dihydropyrimidinase-like 2
mm9_v1_chr11_+_94812919_94812953	1.45313	FOXD3.p2	AK159300|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr16_-_44139087_44139164	1.45063	FOXD3.p2	AK140873|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	BC038392|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK150742|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK166857|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK149833|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK153403|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK154869|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK160792|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	AK170721|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A	NM_007508|Atp6v1a|11964|ATPase, H+ transporting, lysosomal V1 subunit A
mm9_v1_chr3_-_92819586_92819610	1.44745	FOXD3.p2	BC060280|Crct1|74175|cysteine-rich C-terminal 1	AK009010|Crct1|74175|cysteine-rich C-terminal 1	NM_028798|Crct1|74175|cysteine-rich C-terminal 1
mm9_v1_chr4_-_60675161_60675282	1.44417	FOXD3.p2	AJ309921|Mup10|100039008|major urinary protein 10	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC059097|Mup2|17841|major urinary protein 2	BC099597|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	BC037152|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M16356|Mup2|17841|major urinary protein 2	M28649|Mup1|17840|major urinary protein 1	BC012259|Mup2|17841|major urinary protein 2	NM_001134644|LOC100048885|100048885|major urinary protein LOC100048885	AK013259|Mup19|100189605|major urinary protein 19	AK013972|Mup11|100039028|major urinary protein 11	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2	NM_001164526|Mup11|100039028|major urinary protein 11	M16355|Mup1|17840|major urinary protein 1
mm9_v1_chr7_-_134563059_134563065	1.4416	FOXD3.p2	BC038680|Zfp688|69234|zinc finger protein 688
mm9_v1_chr11_+_4886860_4887033	1.44029	FOXD3.p2	AK155892|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	NM_007454|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK165747|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK170376|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK159273|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK160042|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	Y07919|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	BC008513|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK180383|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit
mm9_v1_chr1_+_174078145_174078245	1.43672	FOXD3.p2	NM_153555|Dcaf8|98193|DDB1 and CUL4 associated factor 8	BC023704|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK146825|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK164799|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK047316|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr13_+_55802874_55802961	1.43572	FOXD3.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr6_+_38484796_38484868	1.4339	FOXD3.p2	AK003231|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	BC059710|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK008291|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	NM_025363|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene	AK009186|1110001J03Rik|66117|RIKEN cDNA 1110001J03 gene
mm9_v1_chr6_+_113433507_113433615	1.42555	FOXD3.p2	BC029065|Creld1|171508|cysteine-rich with EGF-like domains 1	AK155777|Creld1|171508|cysteine-rich with EGF-like domains 1	AB009020|Creld1|171508|cysteine-rich with EGF-like domains 1	BC010804|Creld1|171508|cysteine-rich with EGF-like domains 1	BC023893|Creld1|171508|cysteine-rich with EGF-like domains 1	NM_133930|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr18_-_70301202_70301243	1.42395	FOXD3.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr11_+_117643610_117643698	1.41923	FOXD3.p2	NM_001195089|Tmc8|217356|transmembrane channel-like gene family 8	NM_001195090|Tmc8|217356|transmembrane channel-like gene family 8	NM_181856|Tmc8|217356|transmembrane channel-like gene family 8	AK171772|Tmc8|217356|transmembrane channel-like gene family 8	AK156764|Tmc8|217356|transmembrane channel-like gene family 8	AY236501|Tmc8|217356|transmembrane channel-like gene family 8
mm9_v1_chr10_+_81022229_81022246	1.41902	FOXD3.p2	AK131845|Aes|14797|amino-terminal enhancer of split	AK131994|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr9_+_47338431_47338446	1.4189	FOXD3.p2	AB052293|Cadm1|54725|cell adhesion molecule 1	AB377192|Cadm1|54725|cell adhesion molecule 1	AK053839|Cadm1|54725|cell adhesion molecule 1	NM_001025600|Cadm1|54725|cell adhesion molecule 1	NM_018770|Cadm1|54725|cell adhesion molecule 1	NM_207675|Cadm1|54725|cell adhesion molecule 1	NM_207676|Cadm1|54725|cell adhesion molecule 1	AF539424|Cadm1|54725|cell adhesion molecule 1	BC095986|Cadm1|54725|cell adhesion molecule 1	BC069937|Cadm1|54725|cell adhesion molecule 1	BC057125|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr12_+_30219769_30219800	1.41806	FOXD3.p2	AK036205|Myt1l|17933|myelin transcription factor 1-like	NM_001093776|Myt1l|17933|myelin transcription factor 1-like	BC079651|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr1_-_173225039_173225152	1.41664	FOXD3.p2	AK187472|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1	BC021936|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1	AK003897|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1	NM_025388|Ufc1|66155|ubiquitin-fold modifier conjugating enzyme 1
mm9_v1_chr14_-_33015012_33015098	1.41638	FOXD3.p2	BC062963|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK013976|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132019|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132319|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC096669|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK146516|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC037022|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC069903|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AB021122|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	NM_016897|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)
mm9_v1_chr9_-_55983967_55984081	1.41487	FOXD3.p2	AK212733|Tspan3|56434|tetraspanin 3	AK206202|Tspan3|56434|tetraspanin 3	AK211000|Tspan3|56434|tetraspanin 3	AK216580|Tspan3|56434|tetraspanin 3	AK219763|Tspan3|56434|tetraspanin 3	AK219867|Tspan3|56434|tetraspanin 3	AK206891|Tspan3|56434|tetraspanin 3	AK219936|Tspan3|56434|tetraspanin 3
mm9_v1_chrX_-_61530170_61530177	1.40798	FOXD3.p2	AK053065|Slitrk4|245446|SLIT and NTRK-like family, member 4	NM_178740|Slitrk4|245446|SLIT and NTRK-like family, member 4
mm9_v1_chr15_-_37909575_37909591	1.40747	FOXD3.p2	BC064751|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chrX_+_154137193_154137229	1.40705	FOXD3.p2	BC132358|Smpx|66106|small muscle protein, X-linked	BC138801|Smpx|66106|small muscle protein, X-linked
mm9_v1_chr2_-_120365581_120365597	1.40696	FOXD3.p2	U59739|Zfp106|20402|zinc finger protein 106
mm9_v1_chr11_+_3584631_3584687	1.40544	FOXD3.p2	AK018377|Morc2a|74522|microrchidia 2A
mm9_v1_chr7_-_133943848_133943969	1.40482	FOXD3.p2	AK154295|Aldoa|11674|aldolase A, fructose-bisphosphate	NM_001177308|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr12_-_4848240_4848402	1.40105	FOXD3.p2	AB107918|Fkbp1b|14226|FK506 binding protein 1b	AB285017|Fkbp1b|14226|FK506 binding protein 1b	AF060872|Fkbp1b|14226|FK506 binding protein 1b	BC061121|Fkbp1b|14226|FK506 binding protein 1b	BC049596|Fkbp1b|14226|FK506 binding protein 1b	AK005201|Fkbp1b|14226|FK506 binding protein 1b	NM_016863|Fkbp1b|14226|FK506 binding protein 1b
mm9_v1_chr4_-_14753526_14753603	1.39921	FOXD3.p2	BC087552|Otud6b|72201|OTU domain containing 6B	AK172229|Otud6b|72201|OTU domain containing 6B	AK172338|Otud6b|72201|OTU domain containing 6B	BC031474|Otud6b|72201|OTU domain containing 6B	AK011203|Otud6b|72201|OTU domain containing 6B	AK169134|Otud6b|72201|OTU domain containing 6B	AK166546|Otud6b|72201|OTU domain containing 6B	AK144761|Otud6b|72201|OTU domain containing 6B	AK166445|Otud6b|72201|OTU domain containing 6B	AK155761|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr14_-_59761715_59761729	1.39882	FOXD3.p2	AK015075|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	AK006084|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	AK007313|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	BC049552|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene	NM_026461|1700129C05Rik|67932|RIKEN cDNA 1700129C05 gene
mm9_v1_chr7_+_140175699_140175731	1.39873	FOXD3.p2	AJ250693|Zranb1|360216|zinc finger, RAN-binding domain containing 1
mm9_v1_chr11_-_35647952_35648029	1.39852	FOXD3.p2	BC020132|Rars|104458|arginyl-tRNA synthetase	AK076160|Rars|104458|arginyl-tRNA synthetase	AK149856|Rars|104458|arginyl-tRNA synthetase	AK152108|Rars|104458|arginyl-tRNA synthetase	AK160216|Rars|104458|arginyl-tRNA synthetase	AK166097|Rars|104458|arginyl-tRNA synthetase	AK168194|Rars|104458|arginyl-tRNA synthetase	AK011383|Rars|104458|arginyl-tRNA synthetase	NM_025936|Rars|104458|arginyl-tRNA synthetase
mm9_v1_chr2_-_23904343_23904369	1.39598	FOXD3.p2	AB444950|Hnmt|140483|histamine N-methyltransferase	AB444951|Hnmt|140483|histamine N-methyltransferase	AK160131|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr19_+_11844839_11844928	1.39573	FOXD3.p2	AK165616|Mrpl16|94063|mitochondrial ribosomal protein L16	BC044721|Mrpl16|94063|mitochondrial ribosomal protein L16	AK011971|Mrpl16|94063|mitochondrial ribosomal protein L16	BC029009|Mrpl16|94063|mitochondrial ribosomal protein L16	AB049643|Mrpl16|94063|mitochondrial ribosomal protein L16	NM_025606|Mrpl16|94063|mitochondrial ribosomal protein L16	AK004034|Mrpl16|94063|mitochondrial ribosomal protein L16	AK009687|Mrpl16|94063|mitochondrial ribosomal protein L16
mm9_v1_chr17_+_35272145_35272203	1.39416	FOXD3.p2	NM_057171|Bag6|224727|BCL2-associated athanogene 6	AK148796|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr13_-_97804287_97804316	1.39329	FOXD3.p2	AK006488|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	BC049576|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	AK006036|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_001080777|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_025585|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene
mm9_v1_chr19_+_5492584_5492667	1.39197	FOXD3.p2	
mm9_v1_chr16_-_14159346_14159388	1.39181	FOXD3.p2	AK158881|4921513D23Rik|223989|RIKEN cDNA 4921513D23 gene	NM_001081154|4921513D23Rik|223989|RIKEN cDNA 4921513D23 gene
mm9_v1_chr12_-_4914313_4914463	1.39032	FOXD3.p2	AK031821|Ubxn2a|217379|UBX domain protein 2A	NM_145441|Ubxn2a|217379|UBX domain protein 2A	AK134666|Ubxn2a|217379|UBX domain protein 2A	AK041556|Ubxn2a|217379|UBX domain protein 2A	AK161940|Ubxn2a|217379|UBX domain protein 2A
mm9_v1_chr18_+_31948788_31948829	1.39019	FOXD3.p2	AK011600|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027002|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	AK009093|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	BC004810|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027101|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D
mm9_v1_chr4_-_63707849_63707898	1.38971	FOXD3.p2	D90343|Tnc|21923|tenascin C
mm9_v1_chr6_+_136903029_136903071	1.38886	FOXD3.p2	AK080696|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	AK020922|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	NM_023898|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC058192|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC115671|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC115672|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma	BC057290|Pde6h|78600|phosphodiesterase 6H, cGMP-specific, cone, gamma
mm9_v1_chr5_-_111239115_111239150	1.38763	FOXD3.p2	AK154939|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)
mm9_v1_chr2_-_26207531_26207599	1.38359	FOXD3.p2	BC031595|Dnlz|52838|DNL-type zinc finger	BC139334|Dnlz|52838|DNL-type zinc finger	BC139333|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr19_+_5740903_5740936	1.37794	FOXD3.p2	AK080869|Ltbp3|16998|latent transforming growth factor beta binding protein 3	NM_008520|Ltbp3|16998|latent transforming growth factor beta binding protein 3
mm9_v1_chr19_+_47303332_47303400	1.37752	FOXD3.p2	NM_001163480|Neurl1a|18011|neuralized homolog 1A (Drosophila)	AF401228|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr8_+_71732923_71732973	1.37354	FOXD3.p2	NM_001013379|Zfp930|234358|zinc finger protein 930	AK040352|Zfp930|234358|zinc finger protein 930
mm9_v1_chrX_-_93152223_93152253	1.37273	FOXD3.p2	BC032218|Las1l|76130|LAS1-like (S. cerevisiae)	AK018059|Las1l|76130|LAS1-like (S. cerevisiae)	BC141155|Las1l|76130|LAS1-like (S. cerevisiae)
mm9_v1_chr4_-_155608885_155608924	1.37146	FOXD3.p2	AK154523|Klhl17|231003|kelch-like 17 (Drosophila)	AK170825|Klhl17|231003|kelch-like 17 (Drosophila)	BC139309|Klhl17|231003|kelch-like 17 (Drosophila)	AK049214|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr5_-_124022937_124023057	1.3666	FOXD3.p2	AK194964|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AF439858|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK019463|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK140553|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150282|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150550|Vps33a|77573|vacuolar protein sorting 33A (yeast)	BC046417|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK041982|Vps33a|77573|vacuolar protein sorting 33A (yeast)	NM_029929|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr4_-_115747606_115747639	1.36648	FOXD3.p2	AK003539|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	BC011388|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK019085|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK003266|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK088185|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK054005|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr2_-_110203264_110203281	1.36562	FOXD3.p2	AK159648|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr18_-_35881144_35881144	1.36247	FOXD3.p2	AK157485|Ecscr|68545|endothelial cell-specific chemotaxis regulator	NM_001033141|Ecscr|68545|endothelial cell-specific chemotaxis regulator
mm9_v1_chr5_+_145844689_145844781	1.36116	FOXD3.p2	AB024984|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	NM_019767|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK003986|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK145663|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK076107|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	BC001988|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A	AK002475|Arpc1a|56443|actin related protein 2/3 complex, subunit 1A
mm9_v1_chr3_-_141645214_141645214	1.36009	FOXD3.p2	BC065143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	NM_007560|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr1_+_155756310_155756313	1.35967	FOXD3.p2	AK146463|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK158643|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159888|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK152497|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr3_+_131227699_131227731	1.35965	FOXD3.p2	NM_011863|Papss1|23971|3'-phosphoadenosine 5'-phosphosulfate synthase 1
mm9_v1_chr7_-_31016726_31016816	1.35831	FOXD3.p2	BC010684|Tbcb|66411|tubulin folding cofactor B	AK002316|Tbcb|66411|tubulin folding cofactor B	AK003655|Tbcb|66411|tubulin folding cofactor B	AK010438|Tbcb|66411|tubulin folding cofactor B
mm9_v1_chr10_-_36855668_36856157	1.35722	FOXD3.p2	AK151646|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK153217|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr6_-_18464737_18464763	1.35567	FOXD3.p2	BC068156|Cttnbp2|30785|cortactin binding protein 2	AK021092|Cttnbp2|30785|cortactin binding protein 2
mm9_v1_chr11_+_94871620_94871635	1.35513	FOXD3.p2	BC049954|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr2_-_127614580_127614637	1.35464	FOXD3.p2	AF127180|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AF176210|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AJ243223|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	BC118953|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767895|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767896|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767897|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	FJ767898|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	NM_016902|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174553|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	EF174554|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)	AK159627|Nphp1|53885|nephronophthisis 1 (juvenile) homolog (human)
mm9_v1_chr4_-_116300533_116300555	1.3522	FOXD3.p2	AK132690|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AK161367|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	AF034610|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)	NM_016777|Nasp|50927|nuclear autoantigenic sperm protein (histone-binding)
mm9_v1_chr14_-_60216634_60216802	1.35194	FOXD3.p2	AK217714|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	BC006901|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK038926|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032600|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK009280|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032813|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK045962|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK039148|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK042494|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168535|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168536|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168537|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168538|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_027986|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1
mm9_v1_chr3_+_137940608_137940618	1.35135	FOXD3.p2	AK146094|Adh1|11522|alcohol dehydrogenase 1 (class I)	BC013477|Adh1|11522|alcohol dehydrogenase 1 (class I)	NM_007409|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr16_+_20589654_20589675	1.35096	FOXD3.p2	AK141799|Vwa5b2|328643|von Willebrand factor A domain containing 5B2	NM_001144953|Vwa5b2|328643|von Willebrand factor A domain containing 5B2	NM_182636|Vwa5b2|328643|von Willebrand factor A domain containing 5B2
mm9_v1_chr7_-_31838140_31838160	1.3492	FOXD3.p2	AK003504|Fxyd1|56188|FXYD domain-containing ion transport regulator 1
mm9_v1_chr16_-_36046531_36046538	1.34813	FOXD3.p2	AK182371|Fam162a|70186|family with sequence similarity 162, member A	AK212003|Fam162a|70186|family with sequence similarity 162, member A
mm9_v1_chr5_-_89886732_89886828	1.3462	FOXD3.p2	M55413|Gc|14473|group specific component	AK010965|Gc|14473|group specific component	BC010762|Gc|14473|group specific component	BC051395|Gc|14473|group specific component	NM_008096|Gc|14473|group specific component
mm9_v1_chr7_-_125587065_125587075	1.34544	FOXD3.p2	AB069667|Syt17|110058|synaptotagmin XVII	NM_138649|Syt17|110058|synaptotagmin XVII
mm9_v1_chr11_-_6344445_6344467	1.34365	FOXD3.p2	NM_029938|H2afv|77605|H2A histone family, member V	AK155105|H2afv|77605|H2A histone family, member V
mm9_v1_chr6_-_122287014_122287032	1.34287	FOXD3.p2	U63386|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_001042623|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_007905|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr11_-_99997241_99997264	1.34237	FOXD3.p2	BC057934|Krt15|16665|keratin 15	NM_008469|Krt15|16665|keratin 15
mm9_v1_chr7_-_59261060_59261387	1.34213	FOXD3.p2	AK005663|Svip|75744|small VCP/p97-interacting protein	AK029831|Svip|75744|small VCP/p97-interacting protein	BC100498|Svip|75744|small VCP/p97-interacting protein	BC049720|Svip|75744|small VCP/p97-interacting protein	AK133737|Svip|75744|small VCP/p97-interacting protein	AK018351|Svip|75744|small VCP/p97-interacting protein	AK158571|Svip|75744|small VCP/p97-interacting protein	NM_001160345|Svip|75744|small VCP/p97-interacting protein
mm9_v1_chr6_+_38331516_38331524	1.33509	FOXD3.p2	AK035185|Ttc26|264134|tetratricopeptide repeat domain 26	BC066060|Ttc26|264134|tetratricopeptide repeat domain 26	NM_153600|Ttc26|264134|tetratricopeptide repeat domain 26	BC031513|Ttc26|264134|tetratricopeptide repeat domain 26	BC066087|Ttc26|264134|tetratricopeptide repeat domain 26
mm9_v1_chr9_+_15043488_15043639	1.33455	FOXD3.p2	AK008621|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	AK034938|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	NM_026955|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene	BC055786|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene
mm9_v1_chr9_+_88475873_88475994	1.33401	FOXD3.p2	AK145647|Trim43a|547109|tripartite motif-containing 43A	NM_001034906|Trim43a|547109|tripartite motif-containing 43A	AK166678|Trim43a|547109|tripartite motif-containing 43A	BC141236|Trim43a|547109|tripartite motif-containing 43A
mm9_v1_chr15_-_11835393_11835453	1.33341	FOXD3.p2	D78175|Npr3|18162|natriuretic peptide receptor 3	BC055897|Npr3|18162|natriuretic peptide receptor 3	NM_001039181|Npr3|18162|natriuretic peptide receptor 3	NM_008728|Npr3|18162|natriuretic peptide receptor 3
mm9_v1_chr11_+_98724908_98724950	1.3326	FOXD3.p2	NM_197940|Wipf2|68524|WAS/WASL interacting protein family, member 2
mm9_v1_chr16_+_42955690_42955696	1.33164	FOXD3.p2	BC002163|BC002163|170658|NADH dehydrogenase Fe-S protein 5 pseudogene
mm9_v1_chr9_-_53475591_53475593	1.32896	FOXD3.p2	AK018437|Cul5|75717|cullin 5
mm9_v1_chr15_-_102552527_102552608	1.32701	FOXD3.p2	AK087513|Calcoco1|67488|calcium binding and coiled coil domain 1	NM_026192|Calcoco1|67488|calcium binding and coiled coil domain 1
mm9_v1_chr3_-_103545641_103545788	1.32594	FOXD3.p2	AK159746|Hipk1|15257|homeodomain interacting protein kinase 1	AK076611|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr2_-_38640034_38640034	1.32558	FOXD3.p2	NM_001159548|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_001159549|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr15_+_82176434_82176522	1.3253	FOXD3.p2	AK151325|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK152795|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	BC028457|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	NM_026914|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK005345|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK170899|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	BC092006|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene
mm9_v1_chr2_+_38853828_38853850	1.32499	FOXD3.p2	NM_029687|Wdr38|76646|WD repeat domain 38	AK007246|Wdr38|76646|WD repeat domain 38	BC115629|Wdr38|76646|WD repeat domain 38
mm9_v1_chr18_+_20823750_20823857	1.32484	FOXD3.p2	NM_013697|Ttr|22139|transthyretin	BC024702|Ttr|22139|transthyretin
mm9_v1_chr1_+_174048400_174048426	1.32475	FOXD3.p2	BC005609|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr19_-_40261753_40261779	1.32009	FOXD3.p2	BC022151|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC023894|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AY227736|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC034831|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC016494|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AK050082|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	NM_145499|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70
mm9_v1_chr7_-_125832234_125832286	1.31923	FOXD3.p2	
mm9_v1_chr5_-_111239017_111239099	1.31859	FOXD3.p2	BC059835|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK148317|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK156534|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	BC057121|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	NM_009469|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)
mm9_v1_chr6_-_72566993_72566993	1.31842	FOXD3.p2	AK076586|Tgoln1|22134|trans-golgi network protein	NM_009443|Tgoln1|22134|trans-golgi network protein
mm9_v1_chr12_-_15822792_15822800	1.31837	FOXD3.p2	AK080064|Trib2|217410|tribbles homolog 2 (Drosophila)	AK082329|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr1_-_121545442_121545576	1.31568	FOXD3.p2	AK034676|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK047523|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK173198|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	BC011476|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044959|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK044996|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK079301|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK161141|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK027983|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK037024|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK136125|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK040354|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	AK167449|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_001113416|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5	NM_145506|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr18_+_70085202_70085238	1.31407	FOXD3.p2	AK078964|Ccdc68|381175|coiled-coil domain containing 68	NM_201362|Ccdc68|381175|coiled-coil domain containing 68	BC046343|Ccdc68|381175|coiled-coil domain containing 68
mm9_v1_chr9_+_120019498_120019516	1.31137	FOXD3.p2	AK078385|Slc25a38|208638|solute carrier family 25, member 38	BC010801|Slc25a38|208638|solute carrier family 25, member 38	NM_144793|Slc25a38|208638|solute carrier family 25, member 38
mm9_v1_chr14_-_52948344_52948436	1.31062	FOXD3.p2	NM_015772|Sall2|50524|sal-like 2 (Drosophila)	AJ007396|Sall2|50524|sal-like 2 (Drosophila)
mm9_v1_chr6_-_18464792_18464824	1.30947	FOXD3.p2	AK028980|Cttnbp2|30785|cortactin binding protein 2	AK019384|Cttnbp2|30785|cortactin binding protein 2	BC141407|Cttnbp2|30785|cortactin binding protein 2	NM_080285|Cttnbp2|30785|cortactin binding protein 2
mm9_v1_chr12_-_87419813_87420026	1.30837	FOXD3.p2	AK148385|Tgfb3|21809|transforming growth factor, beta 3	BC094591|Tgfb3|21809|transforming growth factor, beta 3	BC089347|Tgfb3|21809|transforming growth factor, beta 3	AK132519|Tgfb3|21809|transforming growth factor, beta 3	AK145304|Tgfb3|21809|transforming growth factor, beta 3	BC108426|Tgfb3|21809|transforming growth factor, beta 3	NM_009368|Tgfb3|21809|transforming growth factor, beta 3
mm9_v1_chr14_+_56097594_56097633	1.30641	FOXD3.p2	NM_001037938|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	NM_030686|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	BC054361|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4
mm9_v1_chr13_-_32873647_32873647	1.30506	FOXD3.p2	NM_001166030|Mylk4|238564|myosin light chain kinase family, member 4
mm9_v1_chr4_-_116855158_116855228	1.30395	FOXD3.p2	AK150222|Kif2c|73804|kinesin family member 2C	AK088047|Kif2c|73804|kinesin family member 2C	BC006841|Kif2c|73804|kinesin family member 2C	AK015046|Kif2c|73804|kinesin family member 2C	NM_134471|Kif2c|73804|kinesin family member 2C
mm9_v1_chr17_+_47506145_47506145	1.3029	FOXD3.p2	BC048912|Mrps10|64657|mitochondrial ribosomal protein S10	NM_183086|Mrps10|64657|mitochondrial ribosomal protein S10
mm9_v1_chr17_+_45570766_45570813	1.29952	FOXD3.p2	AK045689|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK046225|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK083460|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK171144|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK162357|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK140548|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene
mm9_v1_chr1_+_174628164_174628196	1.29304	FOXD3.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chr15_-_89422293_89422353	1.29277	FOXD3.p2	AK170205|Rabl2|68708|RAB, member of RAS oncogene family-like 2	AK004012|Rabl2|68708|RAB, member of RAS oncogene family-like 2	BC030376|Rabl2|68708|RAB, member of RAS oncogene family-like 2	AK051232|Rabl2|68708|RAB, member of RAS oncogene family-like 2	NM_026817|Rabl2|68708|RAB, member of RAS oncogene family-like 2
mm9_v1_chr2_+_32087125_32087136	1.29198	FOXD3.p2	AK161103|Prrc2b|227723|proline-rich coiled-coil 2B
mm9_v1_chr16_-_32247170_32247249	1.29158	FOXD3.p2	BC026799|Fbxo45|268882|F-box protein 45	BC098203|Fbxo45|268882|F-box protein 45
mm9_v1_chr14_-_56143027_56143052	1.28911	FOXD3.p2	L14935|Nrl|18185|neural retina leucine zipper gene	NM_008736|Nrl|18185|neural retina leucine zipper gene	AK044275|Nrl|18185|neural retina leucine zipper gene
mm9_v1_chr17_-_86544514_86544514	1.28842	FOXD3.p2	AK021298|Srbd1|78586|S1 RNA binding domain 1	NM_030133|Srbd1|78586|S1 RNA binding domain 1
mm9_v1_chr2_-_140497116_140497135	1.28757	FOXD3.p2	AK129369|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr2_+_78710638_78710757	1.28388	FOXD3.p2	AF003346|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr7_+_80520360_80520429	1.28349	FOXD3.p2	AK082560|Rgma|244058|RGM domain family, member A	BC059072|Rgma|244058|RGM domain family, member A	NM_177740|Rgma|244058|RGM domain family, member A
mm9_v1_chr2_+_146681579_146681639	1.28255	FOXD3.p2	BC150844|Plk1s1|228730|polo-like kinase 1 substrate 1	BC150845|Plk1s1|228730|polo-like kinase 1 substrate 1	AK135486|Plk1s1|228730|polo-like kinase 1 substrate 1	NM_001033298|Plk1s1|228730|polo-like kinase 1 substrate 1
mm9_v1_chr3_+_137880777_137880845	1.28129	FOXD3.p2	AK009588|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	AK144795|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	BC047267|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	U20257|Adh7|11529|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
mm9_v1_chr5_+_145965427_145965536	1.28048	FOXD3.p2	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr5_+_115916274_115916295	1.27945	FOXD3.p2	AF162712|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145546|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145908|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145910|Pla2g1b|18778|phospholipase A2, group IB, pancreas	NM_011107|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008934|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK028134|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008331|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK028104|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK007797|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008664|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008668|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK007730|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK019009|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF094610|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008841|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008936|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK009314|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF097637|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF187852|Pla2g1b|18778|phospholipase A2, group IB, pancreas
mm9_v1_chr2_+_162760216_162760271	1.27803	FOXD3.p2	BC029312|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr1_+_194014650_194014665	1.27563	FOXD3.p2	AK147461|Kcnh1|16510|potassium voltage-gated channel, subfamily H (eag-related), member 1
mm9_v1_chr6_+_91928871_91928905	1.27542	FOXD3.p2	AK220153|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5
mm9_v1_chr9_-_64188945_64189063	1.27296	FOXD3.p2	AK035357|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK032451|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	BC056939|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK173310|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK150851|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK151780|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK153433|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	NM_001001295|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like
mm9_v1_chr9_-_48413181_48413227	1.27194	FOXD3.p2	NM_010924|Nnmt|18113|nicotinamide N-methyltransferase	U86105|Nnmt|18113|nicotinamide N-methyltransferase	U86106|Nnmt|18113|nicotinamide N-methyltransferase	U86107|Nnmt|18113|nicotinamide N-methyltransferase	U86108|Nnmt|18113|nicotinamide N-methyltransferase	U89377|Nnmt|18113|nicotinamide N-methyltransferase
mm9_v1_chr5_-_143656888_143656920	1.26778	FOXD3.p2	BC115599|Fbxl18|231863|F-box and leucine-rich repeat protein 18	BC139739|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK154354|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK144757|Fbxl18|231863|F-box and leucine-rich repeat protein 18	NM_001033312|Fbxl18|231863|F-box and leucine-rich repeat protein 18
mm9_v1_chr6_+_87040212_87040221	1.26577	FOXD3.p2	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr11_+_78006893_78006893	1.26174	FOXD3.p2	AK160258|Proca1|216974|protein interacting with cyclin A1	NM_001045516|Proca1|216974|protein interacting with cyclin A1
mm9_v1_chr4_-_116228531_116228547	1.25908	FOXD3.p2	AK041960|Tmem69|230657|transmembrane protein 69	BC106178|Tmem69|230657|transmembrane protein 69	NM_177670|Tmem69|230657|transmembrane protein 69
mm9_v1_chr11_+_94871643_94871672	1.25529	FOXD3.p2	AK044765|Samd14|217125|sterile alpha motif domain containing 14	BC034054|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr10_-_80363493_80363567	1.25426	FOXD3.p2	AK009041|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK013230|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK003054|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK009152|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK088984|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	BC011436|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr5_-_90692344_90692414	1.25311	FOXD3.p2	AK153560|Ankrd17|81702|ankyrin repeat domain 17
mm9_v1_chr1_-_77511653_77511664	1.25294	FOXD3.p2	AK028509|Epha4|13838|Eph receptor A4	AK147698|Epha4|13838|Eph receptor A4	AK132203|Epha4|13838|Eph receptor A4	NM_007936|Epha4|13838|Eph receptor A4	S57168|Epha4|13838|Eph receptor A4	X65138|Epha4|13838|Eph receptor A4
mm9_v1_chr1_+_37929013_37929099	1.25046	FOXD3.p2	AK048005|Lipt1|623661|lipoyltransferase 1	NM_001037918|Lipt1|623661|lipoyltransferase 1	BC019519|Lipt1|623661|lipoyltransferase 1
mm9_v1_chr2_-_136716832_136716934	1.2495	FOXD3.p2	AK008160|Mkks|59030|McKusick-Kaufman syndrome protein	AK008406|Mkks|59030|McKusick-Kaufman syndrome protein	BC024359|Mkks|59030|McKusick-Kaufman syndrome protein	AK004987|Mkks|59030|McKusick-Kaufman syndrome protein	BC100336|Mkks|59030|McKusick-Kaufman syndrome protein	AK032528|Mkks|59030|McKusick-Kaufman syndrome protein	AK032554|Mkks|59030|McKusick-Kaufman syndrome protein	AF254074|Mkks|59030|McKusick-Kaufman syndrome protein
mm9_v1_chr8_+_109417539_109417610	1.24658	FOXD3.p2	NM_011574|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	BC068113|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK144455|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK146263|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK150862|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK168470|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK173318|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)
mm9_v1_chr11_-_29925939_29926032	1.24586	FOXD3.p2	AK049034|Eml6|237711|echinoderm microtubule associated protein like 6	NM_146016|Eml6|237711|echinoderm microtubule associated protein like 6
mm9_v1_chr10_+_39332739_39332739	1.24585	FOXD3.p2	AK052190|Traf3ip2|103213|TRAF3 interacting protein 2	NM_134000|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr3_-_63654912_63654960	1.24471	FOXD3.p2	AY691172|Plch1|269437|phospholipase C, eta 1	AY691173|Plch1|269437|phospholipase C, eta 1	AY691174|Plch1|269437|phospholipase C, eta 1	NM_001177732|Plch1|269437|phospholipase C, eta 1	NM_001177733|Plch1|269437|phospholipase C, eta 1	NM_183191|Plch1|269437|phospholipase C, eta 1	BC055005|Plch1|269437|phospholipase C, eta 1
mm9_v1_chr2_+_154262114_154262265	1.24432	FOXD3.p2	AK148027|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_009823|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_172860|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK040403|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	DQ213025|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC064679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK049206|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr13_+_23622912_23622975	1.24413	FOXD3.p2	NM_153173|Hist1h4h|69386|histone cluster 1, H4h	AK007642|Hist1h4h|69386|histone cluster 1, H4h	BC087952|Hist1h4h|69386|histone cluster 1, H4h	BC028550|Hist1h4h|69386|histone cluster 1, H4h	BC058529|Hist1h4h|69386|histone cluster 1, H4h
mm9_v1_chr8_+_13869640_13869740	1.24238	FOXD3.p2	NM_181854|Zfp828|101994|zinc finger protein 828	AK132164|Zfp828|101994|zinc finger protein 828	AK170835|Zfp828|101994|zinc finger protein 828	AK139963|Zfp828|101994|zinc finger protein 828	AK133990|Zfp828|101994|zinc finger protein 828	BC028991|Zfp828|101994|zinc finger protein 828	AK129444|Zfp828|101994|zinc finger protein 828
mm9_v1_chr5_-_115750649_115750671	1.24194	FOXD3.p2	BC085492|Dynll1|56455|dynein light chain LC8-type 1
mm9_v1_chr8_+_121868362_121868462	1.24116	FOXD3.p2	AK050550|Hsbp1|68196|heat shock factor binding protein 1	AK018708|Hsbp1|68196|heat shock factor binding protein 1	AK078498|Hsbp1|68196|heat shock factor binding protein 1	AK145940|Hsbp1|68196|heat shock factor binding protein 1	BC002153|Hsbp1|68196|heat shock factor binding protein 1	NM_024219|Hsbp1|68196|heat shock factor binding protein 1
mm9_v1_chr5_+_110973321_110973404	1.24009	FOXD3.p2	NM_198306|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9	AK032568|Galnt9|231605|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9
mm9_v1_chr2_-_62411970_62412077	1.23994	FOXD3.p2	BC019190|Fap|14089|fibroblast activation protein	AK051959|Fap|14089|fibroblast activation protein	NM_007986|Fap|14089|fibroblast activation protein	Y10007|Fap|14089|fibroblast activation protein
mm9_v1_chr18_-_64676090_64676141	1.23958	FOXD3.p2	BC005473|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr11_-_68770359_68770398	1.2389	FOXD3.p2	BC089365|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15	NM_177566|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15
mm9_v1_chr12_-_88443285_88443488	1.23825	FOXD3.p2	AJ245945|Ngb|64242|neuroglobin	AK165775|Ngb|64242|neuroglobin	AK140173|Ngb|64242|neuroglobin	BC024263|Ngb|64242|neuroglobin	NM_022414|Ngb|64242|neuroglobin
mm9_v1_chr4_+_154927385_154927543	1.2368	FOXD3.p2	BC003294|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr11_-_59005268_59005341	1.2358	FOXD3.p2	U53514|Guk1|14923|guanylate kinase 1	AK004205|Guk1|14923|guanylate kinase 1	AK013514|Guk1|14923|guanylate kinase 1	BC024625|Guk1|14923|guanylate kinase 1
mm9_v1_chr11_+_54683756_54683778	1.2339	FOXD3.p2	
mm9_v1_chr9_-_56008828_56008912	1.2331	FOXD3.p2	AK159621|Tspan3|56434|tetraspanin 3	AK159324|Tspan3|56434|tetraspanin 3	AK169068|Tspan3|56434|tetraspanin 3	BC043072|Tspan3|56434|tetraspanin 3	AK146130|Tspan3|56434|tetraspanin 3	AK168231|Tspan3|56434|tetraspanin 3	NM_019793|Tspan3|56434|tetraspanin 3
mm9_v1_chr2_-_26207615_26207656	1.23245	FOXD3.p2	AK004089|Dnlz|52838|DNL-type zinc finger	AK142070|Dnlz|52838|DNL-type zinc finger	NM_001139503|Dnlz|52838|DNL-type zinc finger	NM_001139504|Dnlz|52838|DNL-type zinc finger	NM_026828|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr13_-_74945368_74945386	1.23149	FOXD3.p2	AK028843|Cast|12380|calpastatin	NM_009817|Cast|12380|calpastatin	AK028841|Cast|12380|calpastatin
mm9_v1_chr1_-_176851949_176851953	1.22661	FOXD3.p2	AB011030|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	NM_011825|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	AK142008|Grem2|23893|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm9_v1_chr1_-_95518831_95518886	1.22492	FOXD3.p2	AK211456|Stk25|59041|serine/threonine kinase 25 (yeast)
mm9_v1_chr7_+_24416996_24417006	1.22318	FOXD3.p2	AF324871|Vmn1r171|81012|vomeronasal 1 receptor 171	BC111911|Vmn1r171|81012|vomeronasal 1 receptor 171	NM_030737|Vmn1r171|81012|vomeronasal 1 receptor 171
mm9_v1_chr5_+_54200858_54200899	1.21998	FOXD3.p2	NM_144517|Tbc1d19|67249|TBC1 domain family, member 19	AK083084|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr11_-_96688959_96689060	1.2197	FOXD3.p2	BC047283|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AF071084|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	X78709|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr10_+_13686174_13686209	1.21783	FOXD3.p2	AK147244|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147348|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147655|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	NM_010437|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr9_-_121905086_121905164	1.21668	FOXD3.p2	BC025056|C85492|215494|expressed sequence C85492	BC030931|C85492|215494|expressed sequence C85492	AK042747|C85492|215494|expressed sequence C85492	AK133802|C85492|215494|expressed sequence C85492	AK034473|C85492|215494|expressed sequence C85492	AK054403|C85492|215494|expressed sequence C85492	NM_153540|C85492|215494|expressed sequence C85492
mm9_v1_chr18_-_63851841_63852091	1.21591	FOXD3.p2	AF052660|Txnl1|53382|thioredoxin-like 1	AK144211|Txnl1|53382|thioredoxin-like 1	AK150326|Txnl1|53382|thioredoxin-like 1	AK168712|Txnl1|53382|thioredoxin-like 1	AK150887|Txnl1|53382|thioredoxin-like 1	AK152101|Txnl1|53382|thioredoxin-like 1	AK150983|Txnl1|53382|thioredoxin-like 1	AK167954|Txnl1|53382|thioredoxin-like 1	AK051698|Txnl1|53382|thioredoxin-like 1	AK029807|Txnl1|53382|thioredoxin-like 1	NM_016792|Txnl1|53382|thioredoxin-like 1	BC061123|Txnl1|53382|thioredoxin-like 1
mm9_v1_chr2_-_148701164_148701201	1.21568	FOXD3.p2	AK161856|Cst3|13010|cystatin C	AK151160|Cst3|13010|cystatin C	AK013676|Cst3|13010|cystatin C	AK153533|Cst3|13010|cystatin C	AK166430|Cst3|13010|cystatin C
mm9_v1_chr14_-_123312303_123312411	1.21433	FOXD3.p2	BC080839|A2ld1|223267|AIG2-like domain 1	BC006662|A2ld1|223267|AIG2-like domain 1	AK050251|A2ld1|223267|AIG2-like domain 1	NM_145466|A2ld1|223267|AIG2-like domain 1
mm9_v1_chr5_-_138404150_138404333	1.21351	FOXD3.p2	AK034037|Gjc3|118446|gap junction protein, gamma 3	BC125305|Gjc3|118446|gap junction protein, gamma 3	AK047368|Gjc3|118446|gap junction protein, gamma 3	NM_080450|Gjc3|118446|gap junction protein, gamma 3	AK045577|Gjc3|118446|gap junction protein, gamma 3	AK147913|Gjc3|118446|gap junction protein, gamma 3
mm9_v1_chr18_-_56732585_56732592	1.21259	FOXD3.p2	NM_001127338|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr16_-_29378636_29378817	1.21248	FOXD3.p2	AK158355|Atp13a5|268878|ATPase type 13A5	BC115739|Atp13a5|268878|ATPase type 13A5	AK083102|Atp13a5|268878|ATPase type 13A5	AK083121|Atp13a5|268878|ATPase type 13A5	NM_175650|Atp13a5|268878|ATPase type 13A5
mm9_v1_chr17_-_12868607_12868703	1.21012	FOXD3.p2	BC021651|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1	NM_009202|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1
mm9_v1_chr9_+_108698323_108698461	1.20997	FOXD3.p2	BC039922|Ip6k2|76500|inositol hexaphosphate kinase 2	NM_029634|Ip6k2|76500|inositol hexaphosphate kinase 2	BC060059|Ip6k2|76500|inositol hexaphosphate kinase 2
mm9_v1_chr11_+_109405024_109405067	1.20845	FOXD3.p2	NM_001166177|Arsg|74008|arylsulfatase G	BC039629|Arsg|74008|arylsulfatase G
mm9_v1_chr15_-_82184631_82184726	1.20683	FOXD3.p2	AK002749|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK010988|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK012328|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	BC048451|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	NM_025987|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)
mm9_v1_chr7_-_137409683_137409704	1.2064	FOXD3.p2	M86441|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr8_+_22887026_22887070	1.20624	FOXD3.p2	NM_007843|Defb1|13214|defensin beta 1	AK142544|Defb1|13214|defensin beta 1	BC024380|Defb1|13214|defensin beta 1
mm9_v1_chr15_+_3220999_3221005	1.20506	FOXD3.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr7_+_148317160_148317300	1.20505	FOXD3.p2	AK036368|Ptdss2|27388|phosphatidylserine synthase 2	NM_013782|Ptdss2|27388|phosphatidylserine synthase 2	AK031906|Ptdss2|27388|phosphatidylserine synthase 2	AK048026|Ptdss2|27388|phosphatidylserine synthase 2	AK081275|Ptdss2|27388|phosphatidylserine synthase 2	AK021249|Ptdss2|27388|phosphatidylserine synthase 2	AK032686|Ptdss2|27388|phosphatidylserine synthase 2	AK137415|Ptdss2|27388|phosphatidylserine synthase 2	BC053517|Ptdss2|27388|phosphatidylserine synthase 2	AF099053|Ptdss2|27388|phosphatidylserine synthase 2
mm9_v1_chr7_+_27542160_27542205	1.20322	FOXD3.p2	BC137965|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	BC137966|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	AK029227|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	AF047529|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	NM_007814|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19
mm9_v1_chr5_-_122821971_122822010	1.20307	FOXD3.p2	BC061033|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	NM_026883|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	BC057658|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr17_-_46168654_46168719	1.20138	FOXD3.p2	AY707864|Vegfa|22339|vascular endothelial growth factor A	AY750956|Vegfa|22339|vascular endothelial growth factor A	AY750957|Vegfa|22339|vascular endothelial growth factor A	EF028705|Vegfa|22339|vascular endothelial growth factor A	BC061468|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr13_-_24923314_24923388	1.19756	FOXD3.p2	AK008624|Acot13|66834|acyl-CoA thioesterase 13	BC018165|Acot13|66834|acyl-CoA thioesterase 13	BC096567|Acot13|66834|acyl-CoA thioesterase 13	AK002261|Acot13|66834|acyl-CoA thioesterase 13	NM_025790|Acot13|66834|acyl-CoA thioesterase 13	AK144523|Acot13|66834|acyl-CoA thioesterase 13
mm9_v1_chr11_+_19824417_19824473	1.1975	FOXD3.p2	AK153700|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK036430|Spred2|114716|sprouty-related, EVH1 domain containing 2	NM_033523|Spred2|114716|sprouty-related, EVH1 domain containing 2	AK157817|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chrX_-_7505625_7505732	1.1973	FOXD3.p2	AK141212|Eras|353283|ES cell-expressed Ras	BC119277|Eras|353283|ES cell-expressed Ras	BC119281|Eras|353283|ES cell-expressed Ras	AB093573|Eras|353283|ES cell-expressed Ras	NM_181548|Eras|353283|ES cell-expressed Ras
mm9_v1_chr2_-_140485267_140485302	1.19624	FOXD3.p2	AK017456|Flrt3|71436|fibronectin leucine rich transmembrane protein 3
mm9_v1_chr12_-_74018746_74018843	1.19569	FOXD3.p2	BC137875|4930447C04Rik|75801|RIKEN cDNA 4930447C04 gene	AK015397|4930447C04Rik|75801|RIKEN cDNA 4930447C04 gene	NM_029444|4930447C04Rik|75801|RIKEN cDNA 4930447C04 gene	AK014811|4930447C04Rik|75801|RIKEN cDNA 4930447C04 gene
mm9_v1_chr1_+_134373950_134374067	1.19507	FOXD3.p2	AK049247|Rbbp5|213464|retinoblastoma binding protein 5	BC057632|Rbbp5|213464|retinoblastoma binding protein 5	AK179022|Rbbp5|213464|retinoblastoma binding protein 5	AK195903|Rbbp5|213464|retinoblastoma binding protein 5
mm9_v1_chr15_-_96850752_96850787	1.19231	FOXD3.p2	BC031717|Slc38a4|69354|solute carrier family 38, member 4	AY027919|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr11_-_109583524_109583607	1.19048	FOXD3.p2	BC029169|Fam20a|208659|family with sequence similarity 20, member A	NM_153782|Fam20a|208659|family with sequence similarity 20, member A	AK142932|Fam20a|208659|family with sequence similarity 20, member A
mm9_v1_chr13_+_49600158_49600323	1.18867	FOXD3.p2	AK040995|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC089559|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	NM_001012324|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK134746|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK163501|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC056468|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC065151|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK038812|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific
mm9_v1_chr11_-_30549383_30549455	1.18843	FOXD3.p2	BC027642|Acyp2|75572|acylphosphatase 2, muscle type	AK009134|Acyp2|75572|acylphosphatase 2, muscle type	NM_029344|Acyp2|75572|acylphosphatase 2, muscle type	AK046238|Acyp2|75572|acylphosphatase 2, muscle type
mm9_v1_chr19_-_32061015_32061042	1.18698	FOXD3.p2	AK135485|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr3_-_95161071_95161127	1.18453	FOXD3.p2	AK135833|Setdb1|84505|SET domain, bifurcated 1	BC079537|Setdb1|84505|SET domain, bifurcated 1	AF091628|Setdb1|84505|SET domain, bifurcated 1	AF546078|Setdb1|84505|SET domain, bifurcated 1	AY091600|Setdb1|84505|SET domain, bifurcated 1	BC060173|Setdb1|84505|SET domain, bifurcated 1	AK132202|Setdb1|84505|SET domain, bifurcated 1	NM_001163641|Setdb1|84505|SET domain, bifurcated 1	NM_001163642|Setdb1|84505|SET domain, bifurcated 1	NM_018877|Setdb1|84505|SET domain, bifurcated 1
mm9_v1_chr3_-_88297220_88297233	1.18357	FOXD3.p2	NM_019390|Lmna|16905|lamin A	D14850|Lmna|16905|lamin A
mm9_v1_chr4_+_145260599_145260599	1.18308	FOXD3.p2	BC096593|Gm13242|100041379|predicted gene 13242	NM_001103158|Gm13242|100041379|predicted gene 13242
mm9_v1_chr3_+_63099408_63099509	1.18247	FOXD3.p2	AK076908|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr4_+_99654571_99654630	1.18133	FOXD3.p2	BC005617|Pgm2|72157|phosphoglucomutase 2
mm9_v1_chr4_+_149656024_149656024	1.18007	FOXD3.p2	NM_001085492|Rere|68703|arginine glutamic acid dipeptide (RE) repeats
mm9_v1_chr13_+_98011057_98011069	1.17983	FOXD3.p2	AK132173|Enc1|13803|ectodermal-neural cortex 1	NM_007930|Enc1|13803|ectodermal-neural cortex 1	AK044906|Enc1|13803|ectodermal-neural cortex 1	AK049187|Enc1|13803|ectodermal-neural cortex 1
mm9_v1_chr19_+_26822892_26822948	1.17974	FOXD3.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr18_-_31476626_31476690	1.17451	FOXD3.p2	AK140133|Rit2|19762|Ras-like without CAAX 2	AK046425|Rit2|19762|Ras-like without CAAX 2	AK139394|Rit2|19762|Ras-like without CAAX 2	AF084463|Rit2|19762|Ras-like without CAAX 2	AK162862|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr19_-_6984020_6984224	1.1741	FOXD3.p2	AF110733|Prdx5|54683|peroxiredoxin 5	AK136130|Prdx5|54683|peroxiredoxin 5	AK002383|Prdx5|54683|peroxiredoxin 5	AK003332|Prdx5|54683|peroxiredoxin 5	AK152653|Prdx5|54683|peroxiredoxin 5	AF197951|Prdx5|54683|peroxiredoxin 5	NM_012021|Prdx5|54683|peroxiredoxin 5	AF124994|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr5_-_5664180_5664238	1.174	FOXD3.p2	BC054079|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	BC062906|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK039388|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK140211|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK076835|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK029545|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK039313|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	NM_172447|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK029553|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene
mm9_v1_chr10_+_81022283_81022301	1.17375	FOXD3.p2	X73361|Aes|14797|amino-terminal enhancer of split	BC132217|Aes|14797|amino-terminal enhancer of split	BC132219|Aes|14797|amino-terminal enhancer of split	BC145299|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr15_+_75098850_75098850	1.17351	FOXD3.p2	NM_008530|Ly6f|17071|lymphocyte antigen 6 complex, locus F
mm9_v1_chr16_+_30065419_30065442	1.17181	FOXD3.p2	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr17_-_25933989_25933999	1.16848	FOXD3.p2	AK087402|Metrn|70083|meteorin, glial cell differentiation regulator	NM_133719|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr7_+_134380580_134380598	1.16809	FOXD3.p2	AK218462|Zfp553|233887|zinc finger protein 553
mm9_v1_chr11_-_100217392_100217401	1.16792	FOXD3.p2	BC034089|Hap1|15114|huntingtin-associated protein 1	AK138436|Hap1|15114|huntingtin-associated protein 1	AJ000262|Hap1|15114|huntingtin-associated protein 1	AJ002271|Hap1|15114|huntingtin-associated protein 1
mm9_v1_chr18_+_65237084_65237096	1.16599	FOXD3.p2	AK163497|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr9_-_119213954_119213965	1.16508	FOXD3.p2	AK031790|Oxsr1|108737|oxidative-stress responsive 1	AK075837|Oxsr1|108737|oxidative-stress responsive 1	NM_133985|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr6_+_54987993_54988082	1.16302	FOXD3.p2	NM_180678|Gars|353172|glycyl-tRNA synthetase	AK012758|Gars|353172|glycyl-tRNA synthetase	BC021747|Gars|353172|glycyl-tRNA synthetase	AK146238|Gars|353172|glycyl-tRNA synthetase	AK165857|Gars|353172|glycyl-tRNA synthetase
mm9_v1_chr3_+_122432075_122432112	1.16142	FOXD3.p2	AF541937|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	NM_153422|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC119137|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC120486|Pde5a|242202|phosphodiesterase 5A, cGMP-specific
mm9_v1_chr17_-_23814415_23814446	1.16129	FOXD3.p2	AK160136|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_001161746|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_013749|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr7_-_107731579_107731643	1.15907	FOXD3.p2	AK077636|Mrpl48|52443|mitochondrial ribosomal protein L48	BC037190|Mrpl48|52443|mitochondrial ribosomal protein L48	AK019161|Mrpl48|52443|mitochondrial ribosomal protein L48	AK171917|Mrpl48|52443|mitochondrial ribosomal protein L48	NM_198831|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr6_+_49772688_49772727	1.15209	FOXD3.p2	AK002982|Npy|109648|neuropeptide Y	BC043012|Npy|109648|neuropeptide Y	NM_023456|Npy|109648|neuropeptide Y
mm9_v1_chr11_+_96891242_96891268	1.15173	FOXD3.p2	NM_146027|Scrn2|217140|secernin 2
mm9_v1_chr3_+_54916015_54916063	1.15129	FOXD3.p2	AK159951|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_001144988|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	NM_144895|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	AK129171|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	BC022921|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)	AK087388|Spg20|229285|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm9_v1_chr9_+_75862772_75862821	1.15005	FOXD3.p2	BC037381|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	NM_173731|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK141622|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	AK164164|Hmgcll1|208982|3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
mm9_v1_chr4_-_135609269_135609274	1.14802	FOXD3.p2	BC025077|Rpl11|67025|ribosomal protein L11
mm9_v1_chr19_-_42358648_42358713	1.14789	FOXD3.p2	AK013349|Crtac1|72832|cartilage acidic protein 1
mm9_v1_chr5_-_135727086_135727099	1.14786	FOXD3.p2	AK021164|Fzd9|14371|frizzled homolog 9 (Drosophila)
mm9_v1_chr1_+_173155414_173155449	1.14693	FOXD3.p2	X04119|Apoa2|11807|apolipoprotein A-II	S79794|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr16_-_34514112_34514198	1.14519	FOXD3.p2	BC157950|Kalrn|545156|kalirin, RhoGEF kinase	BC172101|Kalrn|545156|kalirin, RhoGEF kinase	NM_001164268|Kalrn|545156|kalirin, RhoGEF kinase	NM_177357|Kalrn|545156|kalirin, RhoGEF kinase	AK147314|Kalrn|545156|kalirin, RhoGEF kinase	AK147518|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr4_-_155608927_155608999	1.14263	FOXD3.p2	AY423764|Klhl17|231003|kelch-like 17 (Drosophila)	NM_198305|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr3_+_88373199_88373199	1.13978	FOXD3.p2	AK207994|Ubqln4|94232|ubiquilin 4
mm9_v1_chr14_+_79987495_79987615	1.1379	FOXD3.p2	AK082328|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	NM_026474|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK045153|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK141416|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK007881|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK010830|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK020433|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK148838|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	BC009167|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK010711|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
mm9_v1_chr10_-_86164623_86164759	1.13709	FOXD3.p2	AK031918|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK160827|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215377|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK215142|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210698|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK210697|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK205935|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK216702|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK218021|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1	AK186620|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr3_+_136333251_136333262	1.13364	FOXD3.p2	AK166287|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr16_+_16213397_16213405	1.13249	FOXD3.p2	AK005020|Pkp2|67451|plakophilin 2
mm9_v1_chr11_+_98626169_98626302	1.13077	FOXD3.p2	AK165172|Thra|21833|thyroid hormone receptor alpha
mm9_v1_chr10_-_78560301_78560348	1.13052	FOXD3.p2	BC082302|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene	AK148309|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene	NM_001004362|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene
mm9_v1_chr5_-_42235532_42235553	1.13008	FOXD3.p2	AK079548|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK077824|Bod1l|665775|biorientation of chromosomes in cell division 1-like	NM_001081422|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr2_+_106535757_106535757	1.12923	FOXD3.p2	AK012553|Mpped2|77015|metallophosphoesterase domain containing 2	NM_029837|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr4_-_60434715_60434862	1.12894	FOXD3.p2	EU882232|Mup19|100189605|major urinary protein 19	AJ309921|Mup10|100039008|major urinary protein 10	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC055353|LOC100048884|100048884|novel member of the major urinary protein (Mup) gene family	BC106092|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M16356|Mup2|17841|major urinary protein 2	BC012259|Mup2|17841|major urinary protein 2	NM_001126319|Mup9|100038948|major urinary protein 9
mm9_v1_chr4_-_148473897_148473960	1.12723	FOXD3.p2	BC028952|Pex14|56273|peroxisomal biogenesis factor 14	AF097512|Pex14|56273|peroxisomal biogenesis factor 14	NM_019781|Pex14|56273|peroxisomal biogenesis factor 14	AK148779|Pex14|56273|peroxisomal biogenesis factor 14
mm9_v1_chr1_-_10027971_10028048	1.12644	FOXD3.p2	AF065386|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	NM_013715|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	BC046753|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AF068223|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	U70736|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK133073|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK002761|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK005728|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK151492|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK005113|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK012499|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK146271|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
mm9_v1_chr18_+_40416615_40416659	1.12455	FOXD3.p2	AK013700|2900055J20Rik|73001|RIKEN cDNA 2900055J20 gene
mm9_v1_chr2_-_160773804_160773823	1.12414	FOXD3.p2	AK017414|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr18_-_56732522_56732548	1.12255	FOXD3.p2	AK004991|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr1_+_65973093_65973127	1.12166	FOXD3.p2	AK013953|Crygf|12969|crystallin, gamma F	NM_027010|Crygf|12969|crystallin, gamma F	BC056453|Crygf|12969|crystallin, gamma F	M64543|Crygf|12969|crystallin, gamma F
mm9_v1_chr5_+_101227737_101227799	1.1213	FOXD3.p2	AK145935|Mrps18c|68735|mitochondrial ribosomal protein S18C	AK004139|Mrps18c|68735|mitochondrial ribosomal protein S18C	AK088290|Mrps18c|68735|mitochondrial ribosomal protein S18C	BC028442|Mrps18c|68735|mitochondrial ribosomal protein S18C	NM_026826|Mrps18c|68735|mitochondrial ribosomal protein S18C
mm9_v1_chr4_-_104782337_104782438	1.12016	FOXD3.p2	AK044030|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	AK134573|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm9_v1_chr10_+_74500008_74500039	1.11947	FOXD3.p2	AK046113|Rab36|76877|RAB36, member RAS oncogene family
mm9_v1_chr4_-_60594959_60595030	1.11915	FOXD3.p2	EU882231|Mup10|100039008|major urinary protein 10	BC055353|LOC100048884|100048884|novel member of the major urinary protein (Mup) gene family	M28649|Mup1|17840|major urinary protein 1	NM_001122647|Mup10|100039008|major urinary protein 10
mm9_v1_chr8_+_114464581_114464637	1.11655	FOXD3.p2	AK013563|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK134873|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AF190644|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	BC081436|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	NM_026693|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK002596|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2	AK049819|Gabarapl2|93739|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
mm9_v1_chr7_-_31861665_31861715	1.1135	FOXD3.p2	BC002039|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	BC051033|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	BC056223|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	AK145206|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	AK166426|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	X93038|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	NM_008557|Fxyd3|17178|FXYD domain-containing ion transport regulator 3
mm9_v1_chr2_-_42509117_42509117	1.11188	FOXD3.p2	AF270884|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	NM_053011|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)
mm9_v1_chr19_+_3972327_3972327	1.11159	FOXD3.p2	AK136505|Aldh3b2|621603|aldehyde dehydrogenase 3 family, member B2	NM_001177438|Aldh3b2|621603|aldehyde dehydrogenase 3 family, member B2
mm9_v1_chr4_-_104782444_104782511	1.11054	FOXD3.p2	NM_178143|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	BC138565|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	BC138566|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm9_v1_chr1_+_174056868_174056950	1.11034	FOXD3.p2	AK029368|Pex19|19298|peroxisomal biogenesis factor 19	NM_001159525|Pex19|19298|peroxisomal biogenesis factor 19	NM_023041|Pex19|19298|peroxisomal biogenesis factor 19	AK028449|Pex19|19298|peroxisomal biogenesis factor 19	AK075576|Pex19|19298|peroxisomal biogenesis factor 19	AK170175|Pex19|19298|peroxisomal biogenesis factor 19	AK012785|Pex19|19298|peroxisomal biogenesis factor 19	BC019767|Pex19|19298|peroxisomal biogenesis factor 19	Y09046|Pex19|19298|peroxisomal biogenesis factor 19	CT010305|Pex19|19298|peroxisomal biogenesis factor 19	BC012517|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr7_-_116875215_116875245	1.109	FOXD3.p2	AJ277605|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	AB046448|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104347|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104346|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	NM_020051|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)
mm9_v1_chr4_-_61335031_61335133	1.10744	FOXD3.p2	EU882231|Mup10|100039008|major urinary protein 10	AJ309921|Mup10|100039008|major urinary protein 10	EU882232|Mup19|100189605|major urinary protein 19	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC059097|Mup2|17841|major urinary protein 2	BC099597|Mup1|17840|major urinary protein 1	BC055353|LOC100048884|100048884|novel member of the major urinary protein (Mup) gene family	BC106092|Mup1|17840|major urinary protein 1	BC037152|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M16356|Mup2|17841|major urinary protein 2	M28649|Mup1|17840|major urinary protein 1	BC012259|Mup2|17841|major urinary protein 2	AK013259|Mup19|100189605|major urinary protein 19
mm9_v1_chr9_-_96378951_96379045	1.10691	FOXD3.p2	AK007588|Rnf7|19823|ring finger protein 7	BC011127|Rnf7|19823|ring finger protein 7	AK002628|Rnf7|19823|ring finger protein 7	AK003248|Rnf7|19823|ring finger protein 7	AK003963|Rnf7|19823|ring finger protein 7	AK011328|Rnf7|19823|ring finger protein 7	AK146030|Rnf7|19823|ring finger protein 7	NM_011279|Rnf7|19823|ring finger protein 7	AF092877|Rnf7|19823|ring finger protein 7
mm9_v1_chr1_+_58267240_58267313	1.10621	FOXD3.p2	AK158427|Aox4|71872|aldehyde oxidase 4	NM_023631|Aox4|71872|aldehyde oxidase 4	AK160953|Aox4|71872|aldehyde oxidase 4	AK081746|Aox4|71872|aldehyde oxidase 4	AF233581|Aox4|71872|aldehyde oxidase 4	BC117975|Aox4|71872|aldehyde oxidase 4	BC117976|Aox4|71872|aldehyde oxidase 4
mm9_v1_chr6_+_39546504_39546524	1.10591	FOXD3.p2	
mm9_v1_chr4_-_61443185_61443257	1.10503	FOXD3.p2	EU882232|Mup19|100189605|major urinary protein 19	AJ309921|Mup10|100039008|major urinary protein 10	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC055353|LOC100048884|100048884|novel member of the major urinary protein (Mup) gene family	BC106092|Mup1|17840|major urinary protein 1	BC037152|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	AK013259|Mup19|100189605|major urinary protein 19	NM_001135127|Mup19|100189605|major urinary protein 19
mm9_v1_chr5_-_130175960_130176006	1.10361	FOXD3.p2	BC058553|Zfp11|22648|zinc finger protein 11	NM_172462|Zfp11|22648|zinc finger protein 11	AK032872|Zfp11|22648|zinc finger protein 11
mm9_v1_chr13_+_98011206_98011243	1.10256	FOXD3.p2	U65079|Enc1|13803|ectodermal-neural cortex 1	AK008709|Enc1|13803|ectodermal-neural cortex 1
mm9_v1_chr9_-_48413097_48413127	1.10114	FOXD3.p2	BC028757|Nnmt|18113|nicotinamide N-methyltransferase
mm9_v1_chr1_-_93355838_93355884	1.09733	FOXD3.p2	AK044658|Per2|18627|period homolog 2 (Drosophila)	AF035830|Per2|18627|period homolog 2 (Drosophila)	AK122253|Per2|18627|period homolog 2 (Drosophila)	AF036893|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chr18_+_77304212_77304557	1.09728	FOXD3.p2	NM_001164168|Pias2|17344|protein inhibitor of activated STAT 2	NM_001164170|Pias2|17344|protein inhibitor of activated STAT 2	BC034711|Pias2|17344|protein inhibitor of activated STAT 2	BC005596|Pias2|17344|protein inhibitor of activated STAT 2
mm9_v1_chr11_+_62364951_62365050	1.09517	FOXD3.p2	AK007273|Ubb|22187|ubiquitin B	AK003190|Ubb|22187|ubiquitin B	AK010413|Ubb|22187|ubiquitin B	AK010625|Ubb|22187|ubiquitin B	AK012443|Ubb|22187|ubiquitin B	AK013027|Ubb|22187|ubiquitin B	AK132747|Ubb|22187|ubiquitin B	AK165313|Ubb|22187|ubiquitin B	NM_011664|Ubb|22187|ubiquitin B	X51703|Ubb|22187|ubiquitin B	AK160683|Ubb|22187|ubiquitin B	AK013873|Ubb|22187|ubiquitin B	BC019850|Ubb|22187|ubiquitin B	BC100341|Ubb|22187|ubiquitin B
mm9_v1_chr11_+_90110701_90110805	1.09421	FOXD3.p2	AK033889|Mmd|67468|monocyte to macrophage differentiation-associated	AK007961|Mmd|67468|monocyte to macrophage differentiation-associated	BC021914|Mmd|67468|monocyte to macrophage differentiation-associated	NM_026178|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr4_-_142889372_142889476	1.09358	FOXD3.p2	NM_010329|Pdpn|14726|podoplanin	AK158855|Pdpn|14726|podoplanin
mm9_v1_chr19_+_5026004_5026105	1.09311	FOXD3.p2	X86682|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2
mm9_v1_chr8_+_86520110_86520238	1.09305	FOXD3.p2	AK131888|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha
mm9_v1_chr11_+_90110825_90110834	1.08878	FOXD3.p2	AK011418|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr3_+_94914936_94915064	1.08781	FOXD3.p2	BC043029|Vps72|21427|vacuolar protein sorting 72 (yeast)	NM_009336|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK140284|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK155191|Vps72|21427|vacuolar protein sorting 72 (yeast)	BC004834|Vps72|21427|vacuolar protein sorting 72 (yeast)	D43643|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK179387|Vps72|21427|vacuolar protein sorting 72 (yeast)
mm9_v1_chr4_+_12067263_12067419	1.08632	FOXD3.p2	NM_028226|Rbm12b|72397|RNA binding motif protein 12B	AK030861|Rbm12b|72397|RNA binding motif protein 12B
mm9_v1_chr17_+_17539635_17539669	1.07736	FOXD3.p2	BC049574|Lix1|66643|limb expression 1 homolog (chicken)	NM_025681|Lix1|66643|limb expression 1 homolog (chicken)
mm9_v1_chr5_+_138697479_138697530	1.07544	FOXD3.p2	BC056178|0910001L09Rik|66096|RIKEN cDNA 0910001L09 gene
mm9_v1_chrX_+_150266835_150266835	1.07515	FOXD3.p2	BC068162|Spin2|278240|spindlin family, member 2	NM_001005370|Spin2|278240|spindlin family, member 2
mm9_v1_chr2_-_23904890_23904898	1.0748	FOXD3.p2	BC033928|Hnmt|140483|histamine N-methyltransferase	AB070524|Hnmt|140483|histamine N-methyltransferase	AF297037|Hnmt|140483|histamine N-methyltransferase	NM_080462|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr17_-_56144975_56145021	1.07277	FOXD3.p2	BC026642|Stap2|106766|signal transducing adaptor family member 2	NM_145934|Stap2|106766|signal transducing adaptor family member 2	AK050172|Stap2|106766|signal transducing adaptor family member 2	AK050131|Stap2|106766|signal transducing adaptor family member 2
mm9_v1_chr2_-_6134008_6134046	1.06956	FOXD3.p2	BC054365|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	BC002214|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	AK004218|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	AK009166|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3	NM_024208|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3
mm9_v1_chr9_+_21400165_21400200	1.069	FOXD3.p2	
mm9_v1_chr16_+_22920486_22920556	1.06546	FOXD3.p2	AY138460|Fetub|59083|fetuin beta	BC018341|Fetub|59083|fetuin beta
mm9_v1_chr9_-_56776162_56776198	1.06402	FOXD3.p2	AK142274|Snx33|235406|sorting nexin 33	NM_175483|Snx33|235406|sorting nexin 33
mm9_v1_chr7_-_38554642_38554770	1.0639	FOXD3.p2	AK122270|Zfp536|243937|zinc finger protein 536	AK030633|Zfp536|243937|zinc finger protein 536	NM_172385|Zfp536|243937|zinc finger protein 536
mm9_v1_chrX_-_131285919_131285957	1.06354	FOXD3.p2	BC027264|Armcx6|278097|armadillo repeat containing, X-linked 6	AK148507|Armcx6|278097|armadillo repeat containing, X-linked 6	AK160766|Armcx6|278097|armadillo repeat containing, X-linked 6	NM_001007578|Armcx6|278097|armadillo repeat containing, X-linked 6
mm9_v1_chr4_+_98860586_98860624	1.06038	FOXD3.p2	BC058981|Atg4c|242557|autophagy-related 4C (yeast)	NM_175029|Atg4c|242557|autophagy-related 4C (yeast)
mm9_v1_chr1_+_37356745_37356791	1.05739	FOXD3.p2	AK089671|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	AK149414|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr14_+_56097682_56097776	1.05728	FOXD3.p2	AB045132|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK018788|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK146988|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	BC003484|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4
mm9_v1_chr13_+_55794441_55794492	1.05702	FOXD3.p2	AK088693|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	BC051430|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	NM_181278|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr2_-_60511707_60511810	1.0542	FOXD3.p2	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr7_+_29501805_29501891	1.05372	FOXD3.p2	NM_015796|Fbxo17|50760|F-box protein 17	BC026470|Fbxo17|50760|F-box protein 17	AK133408|Fbxo17|50760|F-box protein 17	AK134284|Fbxo17|50760|F-box protein 17	AF176532|Fbxo17|50760|F-box protein 17
mm9_v1_chrX_+_35954355_35954475	1.05349	FOXD3.p2	AK138385|Mcts1|68995|malignant T cell amplified sequence 1	BC037103|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr19_+_53385022_53385154	1.05216	FOXD3.p2	D31824|Mxi1|17859|Max interacting protein 1
mm9_v1_chr9_+_107479326_107479334	1.04874	FOXD3.p2	AF422176|Hyal1|15586|hyaluronoglucosaminidase 1
mm9_v1_chrM_+_13543_13577	1.04854	FOXD3.p2	
mm9_v1_chr9_-_91260597_91260611	1.04844	FOXD3.p2	BC063247|Zic1|22771|zinc finger protein of the cerebellum 1	AK159769|Zic1|22771|zinc finger protein of the cerebellum 1	AK139143|Zic1|22771|zinc finger protein of the cerebellum 1	BC060247|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chr9_-_71332764_71332764	1.04716	FOXD3.p2	AK002571|Grinl1a|28015|glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A	NM_001164793|Grinl1a|28015|glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A
mm9_v1_chr2_-_93997994_93998073	1.04671	FOXD3.p2	BC037620|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC090659|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC010749|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AF064635|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK076088|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK150849|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK152489|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK166027|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK081869|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK082715|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK088521|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK167908|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK078841|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	NM_019657|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12
mm9_v1_chr1_+_134195202_134195202	1.04654	FOXD3.p2	AK080356|Klhdc8a|213417|kelch domain containing 8A	NM_144810|Klhdc8a|213417|kelch domain containing 8A
mm9_v1_chr15_-_81191176_81191243	1.04595	FOXD3.p2	BC011292|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	AK003672|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	AJ006341|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	AK002388|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	NM_011399|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	BC008571|Slc25a17|20524|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
mm9_v1_chr10_+_61155390_61155586	1.04383	FOXD3.p2	AK003538|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr7_-_36103433_36103463	1.04258	FOXD3.p2	BC100577|Gpatch1|67471|G patch domain containing 1	AK154571|Gpatch1|67471|G patch domain containing 1	AK014367|Gpatch1|67471|G patch domain containing 1	BC125584|Gpatch1|67471|G patch domain containing 1	BC132155|Gpatch1|67471|G patch domain containing 1	AK004868|Gpatch1|67471|G patch domain containing 1	NM_026181|Gpatch1|67471|G patch domain containing 1
mm9_v1_chr2_-_131178551_131178627	1.04235	FOXD3.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr13_+_3553690_3553705	1.04139	FOXD3.p2	AK207166|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2	AK213780|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr14_-_66627993_66628046	1.04085	FOXD3.p2	BC019856|Gulo|268756|gulonolactone (L-) oxidase	BC028822|Gulo|268756|gulonolactone (L-) oxidase	BC028828|Gulo|268756|gulonolactone (L-) oxidase	AK167460|Gulo|268756|gulonolactone (L-) oxidase	AK077740|Gulo|268756|gulonolactone (L-) oxidase	NM_178747|Gulo|268756|gulonolactone (L-) oxidase
mm9_v1_chr1_-_73062445_73062472	1.03929	FOXD3.p2	X12521|Tnp1|21958|transition protein 1	AK006495|Tnp1|21958|transition protein 1	BC061170|Tnp1|21958|transition protein 1	BC048494|Tnp1|21958|transition protein 1	NM_009407|Tnp1|21958|transition protein 1
mm9_v1_chr16_+_16213434_16213437	1.03863	FOXD3.p2	AK004650|Pkp2|67451|plakophilin 2	AK004731|Pkp2|67451|plakophilin 2	AK049481|Pkp2|67451|plakophilin 2	AK162000|Pkp2|67451|plakophilin 2	AK167660|Pkp2|67451|plakophilin 2	BC138252|Pkp2|67451|plakophilin 2	BC138253|Pkp2|67451|plakophilin 2	NM_026163|Pkp2|67451|plakophilin 2
mm9_v1_chr17_+_24544500_24544654	1.03828	FOXD3.p2	BC049911|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	BC056614|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr10_-_25798768_25798857	1.03712	FOXD3.p2	AK048673|Tmem200a|77220|transmembrane protein 200A	AK173299|Tmem200a|77220|transmembrane protein 200A	NM_029881|Tmem200a|77220|transmembrane protein 200A
mm9_v1_chr11_-_109583475_109583498	1.0359	FOXD3.p2	BC011274|Fam20a|208659|family with sequence similarity 20, member A
mm9_v1_chr18_+_67247984_67247998	1.03459	FOXD3.p2	AK045484|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	BC078439|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	NM_177137|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm9_v1_chr17_-_23814399_23814413	1.0318	FOXD3.p2	BC025860|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AF156164|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005382|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005530|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr10_+_103605568_103605568	1.03	FOXD3.p2	NM_001177535|Gm4340|100043292|predicted gene 4340
mm9_v1_chr10_+_103614078_103614078	1.03	FOXD3.p2	NM_001177535|Gm4340|100043292|predicted gene 4340
mm9_v1_chr2_-_91019477_91019477	1.02824	FOXD3.p2	NM_001177720|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr9_+_77961211_77961215	1.02781	FOXD3.p2	AF225918|Ick|56542|intestinal cell kinase
mm9_v1_chr11_-_86807135_86807208	1.02667	FOXD3.p2	BC121190|Ypel2|77864|yippee-like 2 (Drosophila)	AK089126|Ypel2|77864|yippee-like 2 (Drosophila)	AK021387|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr7_-_54175214_54175352	1.02473	FOXD3.p2	AK185554|Tsg101|22088|tumor susceptibility gene 101	AK179695|Tsg101|22088|tumor susceptibility gene 101	AK014049|Tsg101|22088|tumor susceptibility gene 101	U52945|Tsg101|22088|tumor susceptibility gene 101	BC085308|Tsg101|22088|tumor susceptibility gene 101	AK146602|Tsg101|22088|tumor susceptibility gene 101	NM_021884|Tsg101|22088|tumor susceptibility gene 101	BC005424|Tsg101|22088|tumor susceptibility gene 101	AK146229|Tsg101|22088|tumor susceptibility gene 101	AK150369|Tsg101|22088|tumor susceptibility gene 101
mm9_v1_chr4_-_98049833_98049960	1.02365	FOXD3.p2	AK216092|Tm2d1|94043|TM2 domain containing 1	AF353993|Tm2d1|94043|TM2 domain containing 1	AK009511|Tm2d1|94043|TM2 domain containing 1	BC089492|Tm2d1|94043|TM2 domain containing 1	NM_053157|Tm2d1|94043|TM2 domain containing 1
mm9_v1_chr7_-_13595141_13595224	1.02175	FOXD3.p2	BC094359|Zbtb45|232879|zinc finger and BTB domain containing 45	NM_001024699|Zbtb45|232879|zinc finger and BTB domain containing 45	AK155880|Zbtb45|232879|zinc finger and BTB domain containing 45	AK166382|Zbtb45|232879|zinc finger and BTB domain containing 45	AK154877|Zbtb45|232879|zinc finger and BTB domain containing 45
mm9_v1_chrX_+_166123130_166123181	1.0216	FOXD3.p2	AK160120|Mid1|17318|midline 1	NM_010797|Mid1|17318|midline 1	Y14848|Mid1|17318|midline 1
mm9_v1_chr5_-_144266956_144266980	1.02096	FOXD3.p2	
mm9_v1_chr7_-_107475377_107475426	1.02046	FOXD3.p2	
mm9_v1_chr7_-_93924317_93924373	1.01871	FOXD3.p2	BC119604|Folh1|53320|folate hydrolase	BC119605|Folh1|53320|folate hydrolase	AK002920|Folh1|53320|folate hydrolase	AF026380|Folh1|53320|folate hydrolase	AK090289|Folh1|53320|folate hydrolase	NM_001159706|Folh1|53320|folate hydrolase	NM_016770|Folh1|53320|folate hydrolase
mm9_v1_chr3_-_85550130_85550130	1.01552	FOXD3.p2	NM_172682|Fam160a1|229488|family with sequence similarity 160, member A1
mm9_v1_chr2_+_128524597_128524732	1.01508	FOXD3.p2	NM_008587|Mertk|17289|c-mer proto-oncogene tyrosine kinase	U21301|Mertk|17289|c-mer proto-oncogene tyrosine kinase
mm9_v1_chr10_-_85961630_85961659	1.01415	FOXD3.p2	AK043854|Syn3|27204|synapsin III	AK087342|Syn3|27204|synapsin III	NM_001164495|Syn3|27204|synapsin III	NM_013722|Syn3|27204|synapsin III
mm9_v1_chr7_+_50469408_50469408	1.01332	FOXD3.p2	EU599041|EU599041|100170401|expressed sequence EU599041	EU599042|EU599041|100170401|expressed sequence EU599041	NM_001177525|EU599041|100170401|expressed sequence EU599041
mm9_v1_chr13_+_5860701_5860744	1.01261	FOXD3.p2	NM_011803|Klf6|23849|Kruppel-like factor 6	AY027436|Klf6|23849|Kruppel-like factor 6
mm9_v1_chr8_+_97190597_97190763	1.01235	FOXD3.p2	BC002131|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	NM_024191|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK149620|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK161325|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK018229|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	CT010168|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr3_+_45182311_45182350	1.01212	FOXD3.p2	BC037259|Pcdh10|18526|protocadherin 10	NM_001098170|Pcdh10|18526|protocadherin 10	NM_001098171|Pcdh10|18526|protocadherin 10	NM_001098172|Pcdh10|18526|protocadherin 10	NM_011043|Pcdh10|18526|protocadherin 10	AK081621|Pcdh10|18526|protocadherin 10	AK081977|Pcdh10|18526|protocadherin 10	BC026712|Pcdh10|18526|protocadherin 10	AK122503|Pcdh10|18526|protocadherin 10
mm9_v1_chr6_+_42195911_42195967	1.00864	FOXD3.p2	NM_029555|Gstk1|76263|glutathione S-transferase kappa 1	AK002661|Gstk1|76263|glutathione S-transferase kappa 1
mm9_v1_chr16_+_20672854_20672888	1.00756	FOXD3.p2	AK053144|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK142399|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK133903|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK139371|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK162698|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066038|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr8_-_75090050_75090196	1.00645	FOXD3.p2	AK215124|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK217818|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK207517|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene
mm9_v1_chr7_+_147960463_147960526	1.00092	FOXD3.p2	X01026|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	M27582|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1
mm9_v1_chr7_+_25039812_25039838	1.00044	FOXD3.p2	AK032355|Zfp108|54678|zinc finger protein 108	NM_018791|Zfp108|54678|zinc finger protein 108	AF167315|Zfp108|54678|zinc finger protein 108
mm9_v1_chrX_-_98280689_98280743	0.997995	FOXD3.p2	BC050195|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	NM_007515|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	U70859|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	AK165931|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	AK077593|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	AK141558|Slc7a3|11989|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
mm9_v1_chr4_+_147822690_147822721	0.996932	FOXD3.p2	NM_020009|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AK172584|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AF152838|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)	AK036004|Mtor|56717|mechanistic target of rapamycin (serine/threonine kinase)
mm9_v1_chr11_+_115168476_115168476	0.995913	FOXD3.p2	AK028866|Otop2|237987|otopetrin 2	NM_172801|Otop2|237987|otopetrin 2
mm9_v1_chr3_-_123088789_123088909	0.99544	FOXD3.p2	AK083169|Mettl14|210529|methyltransferase like 14	AK089949|Mettl14|210529|methyltransferase like 14	AK129409|Mettl14|210529|methyltransferase like 14	BC052204|Mettl14|210529|methyltransferase like 14	AK136652|Mettl14|210529|methyltransferase like 14	AK146881|Mettl14|210529|methyltransferase like 14	AK153810|Mettl14|210529|methyltransferase like 14	NM_201638|Mettl14|210529|methyltransferase like 14
mm9_v1_chr8_-_73300496_73300620	0.993941	FOXD3.p2	BC085501|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	Y13569|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	BC006796|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	AK146195|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	AK148122|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	NM_008841|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)
mm9_v1_chr19_-_37281762_37281782	0.992893	FOXD3.p2	BC128377|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	AY313774|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	NM_198300|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3
mm9_v1_chr1_-_162133574_162133640	0.990174	FOXD3.p2	AK164472|Cacybp|12301|calcyclin binding protein
mm9_v1_chr9_-_53418394_53418489	0.990102	FOXD3.p2	AK146241|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK032097|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK075593|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	BC024763|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	BC024429|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AJ510150|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK169771|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK081715|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	NM_144784|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK163402|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1
mm9_v1_chr5_-_36928872_36928874	0.989978	FOXD3.p2	AK131724|Tbc1d14|100855|TBC1 domain family, member 14	AK029986|Tbc1d14|100855|TBC1 domain family, member 14	NM_001113362|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr15_+_3220766_3220979	0.98733	FOXD3.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr11_+_109511476_109511595	0.984858	FOXD3.p2	AK158562|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha
mm9_v1_chr5_+_111717505_111717674	0.982949	FOXD3.p2	AK132014|Ttc28|209683|tetratricopeptide repeat domain 28	AK172165|Ttc28|209683|tetratricopeptide repeat domain 28
mm9_v1_chr16_+_20141134_20141212	0.98125	FOXD3.p2	NM_001033237|Yeats2|208146|YEATS domain containing 2	NM_001145930|Yeats2|208146|YEATS domain containing 2	NM_001145931|Yeats2|208146|YEATS domain containing 2	AK165933|Yeats2|208146|YEATS domain containing 2	AK160791|Yeats2|208146|YEATS domain containing 2
mm9_v1_chr14_-_56739353_56739461	0.981089	FOXD3.p2	M36901|Gzme|14942|granzyme E	X14093|Gzme|14942|granzyme E	J03256|Gzme|14942|granzyme E	NM_010373|Gzme|14942|granzyme E
mm9_v1_chr6_+_121956815_121956815	0.980703	FOXD3.p2	M65238|Mug2|17837|murinoglobulin 2	NM_008646|Mug2|17837|murinoglobulin 2
mm9_v1_chr11_+_19824374_19824394	0.980497	FOXD3.p2	BC066013|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr11_+_96891270_96891328	0.976208	FOXD3.p2	AK075869|Scrn2|217140|secernin 2	BC021346|Scrn2|217140|secernin 2	BC010784|Scrn2|217140|secernin 2
mm9_v1_chr16_+_32271553_32271694	0.975818	FOXD3.p2	AK009281|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene	NM_183283|2310010M20Rik|69576|RIKEN cDNA 2310010M20 gene
mm9_v1_chr12_+_118997623_118997625	0.975127	FOXD3.p2	AK134824|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr1_-_172018982_172019074	0.973388	FOXD3.p2	AK196844|Ddr2|18214|discoidin domain receptor family, member 2	NM_022563|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr11_+_74584328_74584437	0.972733	FOXD3.p2	AK013306|Mett10d|67493|methyltransferase 10 domain containing	BC022902|Mett10d|67493|methyltransferase 10 domain containing	AK145022|Mett10d|67493|methyltransferase 10 domain containing	AK011780|Mett10d|67493|methyltransferase 10 domain containing	AK012739|Mett10d|67493|methyltransferase 10 domain containing	NM_026197|Mett10d|67493|methyltransferase 10 domain containing	AK145662|Mett10d|67493|methyltransferase 10 domain containing	AK029045|Mett10d|67493|methyltransferase 10 domain containing	AK161574|Mett10d|67493|methyltransferase 10 domain containing	BC003467|Mett10d|67493|methyltransferase 10 domain containing	AK168798|Mett10d|67493|methyltransferase 10 domain containing	BC037452|Mett10d|67493|methyltransferase 10 domain containing	BC054724|Mett10d|67493|methyltransferase 10 domain containing	BC049897|Mett10d|67493|methyltransferase 10 domain containing
mm9_v1_chr1_-_173177242_173177242	0.972346	FOXD3.p2	AK078474|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	NM_153064|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr3_-_27609279_27609407	0.971535	FOXD3.p2	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr7_+_31099832_31099870	0.968013	FOXD3.p2	NM_153577|AI428936|233066|expressed sequence AI428936	BC023803|AI428936|233066|expressed sequence AI428936
mm9_v1_chr1_-_132558108_132558210	0.966915	FOXD3.p2	AK136735|C4bp|12269|complement component 4 binding protein	AK162345|C4bp|12269|complement component 4 binding protein	AB094486|C4bp|12269|complement component 4 binding protein	AK149477|C4bp|12269|complement component 4 binding protein	BC012257|C4bp|12269|complement component 4 binding protein	AB094485|C4bp|12269|complement component 4 binding protein	NM_007576|C4bp|12269|complement component 4 binding protein	AK050344|C4bp|12269|complement component 4 binding protein	AK149468|C4bp|12269|complement component 4 binding protein	M17122|C4bp|12269|complement component 4 binding protein
mm9_v1_chr3_-_69663781_69663817	0.965531	FOXD3.p2	AK009973|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	BC022628|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AF365876|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK004017|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	AK010117|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_001164210|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene	NM_133675|1110032A04Rik|66183|RIKEN cDNA 1110032A04 gene
mm9_v1_chr15_-_102552494_102552522	0.965368	FOXD3.p2	AK018734|Calcoco1|67488|calcium binding and coiled coil domain 1	AK007393|Calcoco1|67488|calcium binding and coiled coil domain 1	BC054783|Calcoco1|67488|calcium binding and coiled coil domain 1	AK220400|Calcoco1|67488|calcium binding and coiled coil domain 1	AK035598|Calcoco1|67488|calcium binding and coiled coil domain 1
mm9_v1_chr4_+_97439255_97439362	0.964647	FOXD3.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr17_-_80963173_80963173	0.964384	FOXD3.p2	AK157995|Cdkl4|381113|cyclin-dependent kinase-like 4	NM_001033443|Cdkl4|381113|cyclin-dependent kinase-like 4
mm9_v1_chr4_-_49493883_49493911	0.96436	FOXD3.p2	AK037657|9030417H13Rik|74545|RIKEN cDNA 9030417H13 gene	AK018513|9030417H13Rik|74545|RIKEN cDNA 9030417H13 gene
mm9_v1_chr6_-_25639904_25639979	0.961877	FOXD3.p2	NM_010338|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr9_+_37209481_37209556	0.959903	FOXD3.p2	AK172104|Robo4|74144|roundabout homolog 4 (Drosophila)
mm9_v1_chr11_-_96805092_96805165	0.95916	FOXD3.p2	AK154443|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr5_+_139064086_139064121	0.958775	FOXD3.p2	AK131909|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK131916|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	NM_183025|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK039936|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	BC055299|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene
mm9_v1_chr15_-_66332402_66332471	0.957044	FOXD3.p2	AF092208|Lrrc6|54562|leucine rich repeat containing 6 (testis)	BC046277|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK077124|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK016236|Lrrc6|54562|leucine rich repeat containing 6 (testis)	NM_019457|Lrrc6|54562|leucine rich repeat containing 6 (testis)
mm9_v1_chr17_+_24078962_24078969	0.957003	FOXD3.p2	BC049605|Sbp|20234|spermine binding protein	NM_011321|Sbp|20234|spermine binding protein	X06246|Sbp|20234|spermine binding protein
mm9_v1_chr13_-_38085986_38086062	0.956507	FOXD3.p2	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr10_-_79209301_79209350	0.955291	FOXD3.p2	BC110697|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK154729|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK053356|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK154181|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK047545|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK085666|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK128956|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	BC117939|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	BC117940|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK030039|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	NM_172551|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)
mm9_v1_chr5_-_87919883_87919895	0.947549	FOXD3.p2	BC048926|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1	AK140757|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1	NM_053184|Ugt2a1|94215|UDP glucuronosyltransferase 2 family, polypeptide A1
mm9_v1_chr10_+_61155793_61155924	0.947398	FOXD3.p2	
mm9_v1_chr19_+_40066913_40066929	0.946629	FOXD3.p2	AK005017|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	NM_010001|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	BC057912|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	AF047542|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37
mm9_v1_chr1_-_173177243_173177273	0.946092	FOXD3.p2	AK146269|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr12_-_47919695_47919761	0.945591	FOXD3.p2	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr1_-_30861874_30861889	0.943888	FOXD3.p2	AK086788|Phf3|213109|PHD finger protein 3
mm9_v1_chrX_+_99998301_99998301	0.94307	FOXD3.p2	AK016891|Dmrtc1c|71083|DMRT-like family C1c	NM_001142690|Dmrtc1c2|668357|DMRT-like family C1c2	NM_001142691|Dmrtc1c|71083|DMRT-like family C1c
mm9_v1_chr4_-_102699296_102699446	0.942996	FOXD3.p2	AF054843|Insl5|23919|insulin-like 5	BC010968|Insl5|23919|insulin-like 5	AF076971|Insl5|23919|insulin-like 5	AF133817|Insl5|23919|insulin-like 5	NM_011831|Insl5|23919|insulin-like 5	AF054842|Insl5|23919|insulin-like 5
mm9_v1_chr9_+_74899844_74899963	0.942969	FOXD3.p2	AK078740|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr15_-_84388245_84388282	0.942632	FOXD3.p2	BC094559|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like	NM_177630|Ldoc1l|223732|leucine zipper, down-regulated in cancer 1-like
mm9_v1_chr3_+_96474053_96474053	0.94044	FOXD3.p2	NM_001081139|Ankrd35|213121|ankyrin repeat domain 35
mm9_v1_chr6_+_146591082_146591141	0.93797	FOXD3.p2	AK009742|Med21|108098|mediator complex subunit 21	AK012217|Med21|108098|mediator complex subunit 21	NM_025315|Med21|108098|mediator complex subunit 21	AK014428|Med21|108098|mediator complex subunit 21	AK019417|Med21|108098|mediator complex subunit 21	BC012286|Med21|108098|mediator complex subunit 21
mm9_v1_chr12_-_99972803_99972854	0.935138	FOXD3.p2	D37801|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK013777|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK030456|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_011877|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr4_-_60083321_60083368	0.93278	FOXD3.p2	NM_001134675|Mup7|100041658|major urinary protein 7
mm9_v1_chr3_-_27795287_27795289	0.931348	FOXD3.p2	AK053134|Tmem212|208613|transmembrane protein 212	BC119391|Tmem212|208613|transmembrane protein 212	BC119393|Tmem212|208613|transmembrane protein 212	NM_001164437|Tmem212|208613|transmembrane protein 212
mm9_v1_chr16_-_11909420_11909546	0.92987	FOXD3.p2	BC025476|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029379|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK032288|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK041329|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	BC034347|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK133977|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK080876|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK049721|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK134718|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	NM_146067|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1	AK029442|Cpped1|223978|calcineurin-like phosphoesterase domain containing 1
mm9_v1_chr2_-_148701126_148701154	0.929499	FOXD3.p2	M59470|Cst3|13010|cystatin C	BC002072|Cst3|13010|cystatin C
mm9_v1_chr11_+_120459734_120459836	0.926064	FOXD3.p2	NM_025389|Anapc11|66156|anaphase promoting complex subunit 11	AK158224|Anapc11|66156|anaphase promoting complex subunit 11	AK003612|Anapc11|66156|anaphase promoting complex subunit 11	AK045408|Anapc11|66156|anaphase promoting complex subunit 11	AK003244|Anapc11|66156|anaphase promoting complex subunit 11	AK136358|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr18_+_21230844_21230846	0.925852	FOXD3.p2	AK098127|Mep1b|17288|meprin 1 beta	L15193|Mep1b|17288|meprin 1 beta	NM_008586|Mep1b|17288|meprin 1 beta	BC145979|Mep1b|17288|meprin 1 beta	BC125627|Mep1b|17288|meprin 1 beta
mm9_v1_chr8_+_28153059_28153137	0.923556	FOXD3.p2	AK049905|Prosc|114863|proline synthetase co-transcribed	BC047992|Prosc|114863|proline synthetase co-transcribed	AK160172|Prosc|114863|proline synthetase co-transcribed	AK032308|Prosc|114863|proline synthetase co-transcribed	AK134549|Prosc|114863|proline synthetase co-transcribed	AK191605|Prosc|114863|proline synthetase co-transcribed	AK203439|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr16_+_31422377_31422406	0.922617	FOXD3.p2	BC043683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_175177|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr16_+_20672890_20672931	0.919838	FOXD3.p2	AK150050|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066103|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC079675|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr18_+_10617756_10617866	0.919727	FOXD3.p2	AK007674|Snrpd1|20641|small nuclear ribonucleoprotein D1	NM_009226|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK011455|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK134582|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK005517|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK135979|Snrpd1|20641|small nuclear ribonucleoprotein D1	BC024875|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK013075|Snrpd1|20641|small nuclear ribonucleoprotein D1	M58558|Snrpd1|20641|small nuclear ribonucleoprotein D1	AK017788|Snrpd1|20641|small nuclear ribonucleoprotein D1
mm9_v1_chr6_-_92164804_92164868	0.919475	FOXD3.p2	BC049106|Zfyve20|78287|zinc finger, FYVE domain containing 20	NM_030081|Zfyve20|78287|zinc finger, FYVE domain containing 20	AK019909|Zfyve20|78287|zinc finger, FYVE domain containing 20	BC017622|Zfyve20|78287|zinc finger, FYVE domain containing 20
mm9_v1_chr1_-_164816645_164816658	0.919169	FOXD3.p2	AK129026|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr4_+_88465822_88465822	0.918538	FOXD3.p2	BC116870|Ifna11|15964|interferon alpha 11	BC116872|Ifna11|15964|interferon alpha 11	NM_008333|Ifna11|15964|interferon alpha 11
mm9_v1_chr17_+_35196041_35196046	0.918219	FOXD3.p2	AF004106|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2
mm9_v1_chr4_+_132776723_132776800	0.91769	FOXD3.p2	NM_027152|Cd164l2|69655|CD164 sialomucin-like 2	AK139809|Cd164l2|69655|CD164 sialomucin-like 2	AK009888|Cd164l2|69655|CD164 sialomucin-like 2	BC111824|Cd164l2|69655|CD164 sialomucin-like 2
mm9_v1_chr14_+_54873808_54873916	0.917397	FOXD3.p2	AK030250|Abhd4|105501|abhydrolase domain containing 4
mm9_v1_chr2_+_122060526_122060603	0.917358	FOXD3.p2	AK152169|Sord|20322|sorbitol dehydrogenase	AK166996|Sord|20322|sorbitol dehydrogenase	AK004692|Sord|20322|sorbitol dehydrogenase	BC024124|Sord|20322|sorbitol dehydrogenase	BC092291|Sord|20322|sorbitol dehydrogenase	AK015059|Sord|20322|sorbitol dehydrogenase	NM_146126|Sord|20322|sorbitol dehydrogenase	AK166988|Sord|20322|sorbitol dehydrogenase	U27014|Sord|20322|sorbitol dehydrogenase	BC039957|Sord|20322|sorbitol dehydrogenase	BC030875|Sord|20322|sorbitol dehydrogenase
mm9_v1_chr6_-_89545534_89545655	0.91651	FOXD3.p2	AK144093|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK087642|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK005696|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	BC052929|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK167314|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK015314|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	BC011331|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	AK002980|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_001167736|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6	NM_025351|Chchd6|66098|coiled-coil-helix-coiled-coil-helix domain containing 6
mm9_v1_chr15_-_3329691_3329763	0.915693	FOXD3.p2	
mm9_v1_chr14_+_62217061_62217076	0.915119	FOXD3.p2	AF220129|Trim13|66597|tripartite motif-containing 13	NM_001164220|Trim13|66597|tripartite motif-containing 13	AK162129|Trim13|66597|tripartite motif-containing 13
mm9_v1_chr15_+_82000246_82000509	0.914976	FOXD3.p2	BC023333|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr7_-_52347489_52347600	0.912682	FOXD3.p2	BC092069|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK077943|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK082762|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK086705|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK132143|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC025602|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC055903|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	NM_026555|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain
mm9_v1_chr7_-_149069070_149069207	0.91201	FOXD3.p2	AK049198|Tollip|54473|toll interacting protein
mm9_v1_chr2_-_127481868_127482018	0.910437	FOXD3.p2	Y07812|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	Y07626|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	BC006826|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	AK169172|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	AK019046|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein	AK004639|Mal|17153|myelin and lymphocyte protein, T-cell differentiation protein
mm9_v1_chrX_+_160528118_160528196	0.909814	FOXD3.p2	AF178085|Tmem27|57394|transmembrane protein 27	NM_020626|Tmem27|57394|transmembrane protein 27	AK148534|Tmem27|57394|transmembrane protein 27	AK002337|Tmem27|57394|transmembrane protein 27	BC049912|Tmem27|57394|transmembrane protein 27
mm9_v1_chrX_+_106290703_106290922	0.908506	FOXD3.p2	BC043055|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	NM_019989|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK218315|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	BC034161|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151871|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK165995|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK146588|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK150604|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151095|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK049929|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151501|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AJ272504|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like
mm9_v1_chr2_+_122463622_122463653	0.90838	FOXD3.p2	BC049633|AA467197|433470|expressed sequence AA467197	NM_001004174|AA467197|433470|expressed sequence AA467197	AK150561|AA467197|433470|expressed sequence AA467197	AK141297|AA467197|433470|expressed sequence AA467197
mm9_v1_chr13_+_48356487_48356596	0.907076	FOXD3.p2	AK041164|Id4|15904|inhibitor of DNA binding 4
mm9_v1_chr6_+_86388364_86388435	0.903688	FOXD3.p2	AK047127|C87436|232196|expressed sequence C87436	NM_146170|C87436|232196|expressed sequence C87436	AK170524|C87436|232196|expressed sequence C87436	AK171511|C87436|232196|expressed sequence C87436	BC025632|C87436|232196|expressed sequence C87436
mm9_v1_chr11_-_120489993_120490076	0.903342	FOXD3.p2	AK038934|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	AK083165|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm9_v1_chr2_+_175964428_175964488	0.902963	FOXD3.p2	AK039408|Gm4724|100043915|predicted gene 4724	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001099349|Gm14308|100043381|predicted gene 14308	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr11_+_115265054_115265195	0.902192	FOXD3.p2	BC028523|Ict1|68572|immature colon carcinoma transcript 1	BC079614|Ict1|68572|immature colon carcinoma transcript 1	AK003192|Ict1|68572|immature colon carcinoma transcript 1	NM_026729|Ict1|68572|immature colon carcinoma transcript 1	AK003286|Ict1|68572|immature colon carcinoma transcript 1
mm9_v1_chr4_+_135728188_135728308	0.901838	FOXD3.p2	AK087452|E2f2|242705|E2F transcription factor 2	NM_177733|E2f2|242705|E2F transcription factor 2
mm9_v1_chr11_-_120459646_120459770	0.901236	FOXD3.p2	AJ252140|Thoc4|21681|THO complex 4	NM_011568|Thoc4|21681|THO complex 4	U89876|Thoc4|21681|THO complex 4	BC120588|Thoc4|21681|THO complex 4	BC137658|Thoc4|21681|THO complex 4
mm9_v1_chr10_+_34001987_34002104	0.900302	FOXD3.p2	NM_009433|Tspyl1|22110|testis-specific protein, Y-encoded-like 1	AK159432|Tspyl1|22110|testis-specific protein, Y-encoded-like 1	AK166438|Tspyl1|22110|testis-specific protein, Y-encoded-like 1	AF042180|Tspyl1|22110|testis-specific protein, Y-encoded-like 1	AK053812|Tspyl1|22110|testis-specific protein, Y-encoded-like 1	BC011213|Tspyl1|22110|testis-specific protein, Y-encoded-like 1	AK166805|Tspyl1|22110|testis-specific protein, Y-encoded-like 1	AK166893|Tspyl1|22110|testis-specific protein, Y-encoded-like 1
mm9_v1_chr4_+_134420419_134420535	0.900095	FOXD3.p2	BC145805|Rhd|19746|Rh blood group, D antigen	NM_011270|Rhd|19746|Rh blood group, D antigen	AF057524|Rhd|19746|Rh blood group, D antigen	AK089642|Rhd|19746|Rh blood group, D antigen	AF069311|Rhd|19746|Rh blood group, D antigen	AK079335|Rhd|19746|Rh blood group, D antigen	AK171641|Rhd|19746|Rh blood group, D antigen	AB015189|Rhd|19746|Rh blood group, D antigen	AB015190|Rhd|19746|Rh blood group, D antigen	AF047827|Rhd|19746|Rh blood group, D antigen	AK157850|Rhd|19746|Rh blood group, D antigen	AF012430|Rhd|19746|Rh blood group, D antigen
mm9_v1_chr7_-_133709864_133709898	0.899777	FOXD3.p2	BC024855|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	NM_146200|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK168160|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK168174|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK076165|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK152693|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C	AK160078|Eif3c|56347|eukaryotic translation initiation factor 3, subunit C
mm9_v1_chr1_+_174012641_174012773	0.899258	FOXD3.p2	NM_009938|Copa|12847|coatomer protein complex subunit alpha	AK162632|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr13_+_49777464_49777562	0.898859	FOXD3.p2	NM_172015|Iars|105148|isoleucine-tRNA synthetase	BC067029|Iars|105148|isoleucine-tRNA synthetase	AK087992|Iars|105148|isoleucine-tRNA synthetase	AK133856|Iars|105148|isoleucine-tRNA synthetase	AK136132|Iars|105148|isoleucine-tRNA synthetase
mm9_v1_chr9_-_63869857_63869865	0.897432	FOXD3.p2	AK046602|Smad6|17130|MAD homolog 6 (Drosophila)	NM_008542|Smad6|17130|MAD homolog 6 (Drosophila)
mm9_v1_chr6_+_57652448_57652452	0.896462	FOXD3.p2	NM_133737|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr10_-_126507271_126507387	0.894522	FOXD3.p2	AK160269|Tspan31|67125|tetraspanin 31	BC023306|Tspan31|67125|tetraspanin 31	AK012457|Tspan31|67125|tetraspanin 31	AK014183|Tspan31|67125|tetraspanin 31	AK075962|Tspan31|67125|tetraspanin 31	NM_025982|Tspan31|67125|tetraspanin 31	AK012567|Tspan31|67125|tetraspanin 31	AK012853|Tspan31|67125|tetraspanin 31	AK013523|Tspan31|67125|tetraspanin 31
mm9_v1_chr3_-_49561168_49561243	0.893418	FOXD3.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr1_-_173177238_173177241	0.892992	FOXD3.p2	AK167016|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr13_+_49639799_49639811	0.892157	FOXD3.p2	NM_001172481|Aspn|66695|asporin	NM_025711|Aspn|66695|asporin
mm9_v1_chr2_-_77008655_77008700	0.891838	FOXD3.p2	AK045498|Ccdc141|545428|coiled-coil domain containing 141	AK011952|Ccdc141|545428|coiled-coil domain containing 141	AK053175|Ccdc141|545428|coiled-coil domain containing 141	NM_001025576|Ccdc141|545428|coiled-coil domain containing 141	AK041121|Ccdc141|545428|coiled-coil domain containing 141
mm9_v1_chr19_+_6984613_6984666	0.888805	FOXD3.p2	AK002791|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	AK003292|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC019418|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr11_+_63892985_63892998	0.887327	FOXD3.p2	AK007927|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene	AK012631|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene
mm9_v1_chr16_-_18426802_18426808	0.886048	FOXD3.p2	NM_001111062|Comt|12846|catechol-O-methyltransferase	NM_007744|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr5_-_44162032_44162072	0.884641	FOXD3.p2	BC023291|Fbxl5|242960|F-box and leucine-rich repeat protein 5
mm9_v1_chr16_-_56029770_56029852	0.882918	FOXD3.p2	AK150595|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK145195|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK152279|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC106192|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC061235|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK159201|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC023320|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK168723|Pcnp|76302|PEST proteolytic signal containing nuclear protein	AK166071|Pcnp|76302|PEST proteolytic signal containing nuclear protein	NM_001024622|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC132588|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC132590|Pcnp|76302|PEST proteolytic signal containing nuclear protein	BC145194|Pcnp|76302|PEST proteolytic signal containing nuclear protein
mm9_v1_chr6_+_57652594_57652646	0.882799	FOXD3.p2	BC016072|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2	AB035967|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr13_+_18809154_18809187	0.878753	FOXD3.p2	AB028843|Vps41|218035|vacuolar protein sorting 41 (yeast)	NM_172120|Vps41|218035|vacuolar protein sorting 41 (yeast)	AK162208|Vps41|218035|vacuolar protein sorting 41 (yeast)	AK051658|Vps41|218035|vacuolar protein sorting 41 (yeast)	AK164177|Vps41|218035|vacuolar protein sorting 41 (yeast)	BC119362|Vps41|218035|vacuolar protein sorting 41 (yeast)	BC125299|Vps41|218035|vacuolar protein sorting 41 (yeast)	AF327407|Vps41|218035|vacuolar protein sorting 41 (yeast)	BC049916|Vps41|218035|vacuolar protein sorting 41 (yeast)
mm9_v1_chr4_+_99496130_99496190	0.87802	FOXD3.p2	BC112327|Efcab7|230500|EF-hand calcium binding domain 7	AK143777|Efcab7|230500|EF-hand calcium binding domain 7	BC020077|Efcab7|230500|EF-hand calcium binding domain 7	NM_145549|Efcab7|230500|EF-hand calcium binding domain 7
mm9_v1_chr10_-_88067758_88067896	0.877904	FOXD3.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr1_+_89470601_89470620	0.877631	FOXD3.p2	AK145284|Neu2|23956|neuraminidase 2	NM_001160163|Neu2|23956|neuraminidase 2	NM_001160164|Neu2|23956|neuraminidase 2	FJ613504|Neu2|23956|neuraminidase 2
mm9_v1_chr5_+_130555291_130555503	0.874851	FOXD3.p2	AK150753|Tpst1|22021|protein-tyrosine sulfotransferase 1	NM_001130476|Tpst1|22021|protein-tyrosine sulfotransferase 1	BC012666|Tpst1|22021|protein-tyrosine sulfotransferase 1
mm9_v1_chr2_-_25463924_25464009	0.871059	FOXD3.p2	BC085507|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	NM_001024616|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC021476|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC020111|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK081440|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK171643|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC058585|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC023692|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	BC051138|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK045520|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK081397|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK157020|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK077311|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene	AK143678|B230208H17Rik|227624|RIKEN cDNA B230208H17 gene
mm9_v1_chr16_+_17276434_17276446	0.86974	FOXD3.p2	AB041601|Tmem191c|224019|transmembrane protein 191C
mm9_v1_chr1_-_172145380_172145502	0.869451	FOXD3.p2	Y10725|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr5_-_143987485_143987560	0.868714	FOXD3.p2	AY820308|Spdyb|74673|speedy homolog B (Xenopus laevis)	AK015441|Spdyb|74673|speedy homolog B (Xenopus laevis)	NM_029048|Spdyb|74673|speedy homolog B (Xenopus laevis)
mm9_v1_chr4_-_123361602_123361602	0.868506	FOXD3.p2	AF150755|Macf1|11426|microtubule-actin crosslinking factor 1	DQ067088|Macf1|11426|microtubule-actin crosslinking factor 1	NM_009600|Macf1|11426|microtubule-actin crosslinking factor 1
mm9_v1_chr4_+_98213324_98213424	0.867784	FOXD3.p2	NM_001005787|Inadl|12695|InaD-like (Drosophila)	NM_007704|Inadl|12695|InaD-like (Drosophila)	AF060539|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr1_+_181891219_181891219	0.866888	FOXD3.p2	BC158017|Cdc42bpa|226751|CDC42 binding protein kinase alpha	BC158095|Cdc42bpa|226751|CDC42 binding protein kinase alpha	NM_001033285|Cdc42bpa|226751|CDC42 binding protein kinase alpha
mm9_v1_chr16_+_20672770_20672837	0.865329	FOXD3.p2	AK081982|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_001005331|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_145941|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr16_+_95479164_95479384	0.864535	FOXD3.p2	AK165436|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	AK165346|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	NM_001039056|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	NM_001039057|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	NM_019664|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	AJ012368|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	BC010794|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15	BC057915|Kcnj15|16516|potassium inwardly-rectifying channel, subfamily J, member 15
mm9_v1_chr15_-_3945704_3945774	0.862159	FOXD3.p2	AK045350|AW549877|106064|expressed sequence AW549877	AK154940|AW549877|106064|expressed sequence AW549877	NM_145930|AW549877|106064|expressed sequence AW549877
mm9_v1_chr1_+_187028043_187028086	0.861456	FOXD3.p2	NM_001163754|Rab3gap2|98732|RAB3 GTPase activating protein subunit 2	AK157509|Rab3gap2|98732|RAB3 GTPase activating protein subunit 2
mm9_v1_chr13_-_76081244_76081314	0.86114	FOXD3.p2	BC005664|Rhobtb3|73296|Rho-related BTB domain containing 3	BC050836|Rhobtb3|73296|Rho-related BTB domain containing 3	NM_028493|Rhobtb3|73296|Rho-related BTB domain containing 3	AK129234|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr3_-_144637974_144638008	0.860902	FOXD3.p2	AY560902|Clca6|99663|chloride channel calcium activated 6	AY560903|Clca6|99663|chloride channel calcium activated 6	AK033591|Clca6|99663|chloride channel calcium activated 6	NM_207208|Clca6|99663|chloride channel calcium activated 6
mm9_v1_chr6_+_42195977_42196020	0.860285	FOXD3.p2	BC051507|Gstk1|76263|glutathione S-transferase kappa 1	BC038151|Gstk1|76263|glutathione S-transferase kappa 1	BC058163|Gstk1|76263|glutathione S-transferase kappa 1	AY279096|Gstk1|76263|glutathione S-transferase kappa 1
mm9_v1_chr7_+_28284335_28284344	0.858468	FOXD3.p2	AJ222968|Prx|19153|periaxin	AJ222969|Prx|19153|periaxin	NM_019412|Prx|19153|periaxin	NM_198048|Prx|19153|periaxin
mm9_v1_chr2_-_112099427_112099447	0.858403	FOXD3.p2	BC125332|BC125332|213765|cDNA sequence BC125332	BC125334|BC125332|213765|cDNA sequence BC125332	AK077049|BC125332|213765|cDNA sequence BC125332	NM_172521|BC125332|213765|cDNA sequence BC125332
mm9_v1_chr10_+_81038028_81038276	0.857452	FOXD3.p2	AK144581|Tle2|21886|transducin-like enhancer of split 2, homolog of Drosophila E(spl)	BC071219|Tle2|21886|transducin-like enhancer of split 2, homolog of Drosophila E(spl)	BC051955|Tle2|21886|transducin-like enhancer of split 2, homolog of Drosophila E(spl)	BC062961|Tle2|21886|transducin-like enhancer of split 2, homolog of Drosophila E(spl)	AF145958|Tle2|21886|transducin-like enhancer of split 2, homolog of Drosophila E(spl)	NM_019725|Tle2|21886|transducin-like enhancer of split 2, homolog of Drosophila E(spl)
mm9_v1_chr8_-_110112260_110112344	0.857105	FOXD3.p2	AK146128|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	M64641|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	AK031013|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	AK159825|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	AK012463|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm9_v1_chr12_-_104976382_104976400	0.857072	FOXD3.p2	NM_009244|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr11_-_68200284_68200327	0.853777	FOXD3.p2	NM_008744|Ntn1|18208|netrin 1
mm9_v1_chr18_+_50115628_50115725	0.853236	FOXD3.p2	AK046910|Dmxl1|240283|Dmx-like 1
mm9_v1_chr6_+_40421405_40421491	0.853144	FOXD3.p2	AK013425|Ssbp1|381760|single-stranded DNA binding protein 1	NM_028358|Ssbp1|381760|single-stranded DNA binding protein 1	NM_212468|Ssbp1|381760|single-stranded DNA binding protein 1	BC028648|Ssbp1|381760|single-stranded DNA binding protein 1	BC061183|Ssbp1|381760|single-stranded DNA binding protein 1	AK090242|Ssbp1|381760|single-stranded DNA binding protein 1	AK090272|Ssbp1|381760|single-stranded DNA binding protein 1	BC060290|Ssbp1|381760|single-stranded DNA binding protein 1	AK160556|Ssbp1|381760|single-stranded DNA binding protein 1
mm9_v1_chr7_-_49948087_49948135	0.851211	FOXD3.p2	BC068175|Gm5595|434179|predicted gene 5595	NM_001008427|Gm5595|434179|predicted gene 5595
mm9_v1_chr7_-_20355818_20355873	0.84719	FOXD3.p2	AF346663|Bcam|57278|basal cell adhesion molecule	AF221507|Bcam|57278|basal cell adhesion molecule	AB035511|Bcam|57278|basal cell adhesion molecule	AK075704|Bcam|57278|basal cell adhesion molecule	AK158439|Bcam|57278|basal cell adhesion molecule	AK054001|Bcam|57278|basal cell adhesion molecule	AK040564|Bcam|57278|basal cell adhesion molecule	BC004826|Bcam|57278|basal cell adhesion molecule
mm9_v1_chr2_+_91570249_91570297	0.846909	FOXD3.p2	NM_001080754|Ambra1|228361|autophagy/beclin 1 regulator 1	NM_172669|Ambra1|228361|autophagy/beclin 1 regulator 1
mm9_v1_chr7_-_116073666_116073691	0.846216	FOXD3.p2	AK032446|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113194|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113801|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028802|Nlrp10|244202|NLR family, pyrin domain containing 10	NM_175532|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028575|Nlrp10|244202|NLR family, pyrin domain containing 10
mm9_v1_chr1_-_175266945_175266952	0.846169	FOXD3.p2	AK031927|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr11_-_45979836_45979862	0.845736	FOXD3.p2	AK035736|Nipal4|214112|NIPA-like domain containing 4	BC139819|Nipal4|214112|NIPA-like domain containing 4	AK035561|Nipal4|214112|NIPA-like domain containing 4	NM_172524|Nipal4|214112|NIPA-like domain containing 4
mm9_v1_chr15_-_77949709_77949709	0.844841	FOXD3.p2	AF077739|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2	NM_007583|Cacng2|12300|calcium channel, voltage-dependent, gamma subunit 2
mm9_v1_chr4_-_140221801_140221819	0.844435	FOXD3.p2	AK028648|Arhgef10l|72754|Rho guanine nucleotide exchange factor (GEF) 10-like	NM_001112722|Arhgef10l|72754|Rho guanine nucleotide exchange factor (GEF) 10-like
mm9_v1_chr7_-_139346304_139346369	0.843253	FOXD3.p2	AK038874|Cpxm2|55987|carboxypeptidase X 2 (M14 family)	BC021444|Cpxm2|55987|carboxypeptidase X 2 (M14 family)
mm9_v1_chr1_-_109174947_109174947	0.841568	FOXD3.p2	AK003650|Serpinb3c|381286|serine (or cysteine) peptidase inhibitor, clade B, member 3C	NM_201363|Serpinb3c|381286|serine (or cysteine) peptidase inhibitor, clade B, member 3C
mm9_v1_chr19_-_8848911_8848977	0.838927	FOXD3.p2	BC061068|Tmem179b|67706|transmembrane protein 179B	AK007906|Tmem179b|67706|transmembrane protein 179B	AK002731|Tmem179b|67706|transmembrane protein 179B	AK010996|Tmem179b|67706|transmembrane protein 179B	BC087914|Tmem179b|67706|transmembrane protein 179B	AK005135|Tmem179b|67706|transmembrane protein 179B	BC116961|Tmem179b|67706|transmembrane protein 179B	BC116963|Tmem179b|67706|transmembrane protein 179B	BC144813|Tmem179b|67706|transmembrane protein 179B	NM_026325|Tmem179b|67706|transmembrane protein 179B
mm9_v1_chr11_-_98407281_98407344	0.838818	FOXD3.p2	AK157177|Ikzf3|22780|IKAROS family zinc finger 3	AK036657|Ikzf3|22780|IKAROS family zinc finger 3	NM_011771|Ikzf3|22780|IKAROS family zinc finger 3
mm9_v1_chr5_+_136282748_136282767	0.838196	FOXD3.p2	AB041661|Srrm3|58212|serine/arginine repetitive matrix 3
mm9_v1_chr10_+_23614493_23614678	0.83707	FOXD3.p2	NM_011704|Vnn1|22361|vanin 1	AK145984|Vnn1|22361|vanin 1	AK002773|Vnn1|22361|vanin 1	AK167427|Vnn1|22361|vanin 1	AJ132098|Vnn1|22361|vanin 1	BC019203|Vnn1|22361|vanin 1
mm9_v1_chr16_+_17276384_17276419	0.833026	FOXD3.p2	NM_177473|Tmem191c|224019|transmembrane protein 191C	AK016675|Tmem191c|224019|transmembrane protein 191C
mm9_v1_chr18_+_34490797_34490849	0.832415	FOXD3.p2	AK004118|Srp19|66384|signal recognition particle 19	AK037009|Srp19|66384|signal recognition particle 19	NM_025527|Srp19|66384|signal recognition particle 19	AK010760|Srp19|66384|signal recognition particle 19	AK152322|Srp19|66384|signal recognition particle 19	AK135508|Srp19|66384|signal recognition particle 19	AK162107|Srp19|66384|signal recognition particle 19	BC051932|Srp19|66384|signal recognition particle 19	AK009412|Srp19|66384|signal recognition particle 19
mm9_v1_chr1_-_163061538_163061643	0.831725	FOXD3.p2	BC060183|Klhl20|226541|kelch-like 20 (Drosophila)	AK053102|Klhl20|226541|kelch-like 20 (Drosophila)	AK053371|Klhl20|226541|kelch-like 20 (Drosophila)	AK054169|Klhl20|226541|kelch-like 20 (Drosophila)	BC019571|Klhl20|226541|kelch-like 20 (Drosophila)	AK220547|Klhl20|226541|kelch-like 20 (Drosophila)	NM_001039482|Klhl20|226541|kelch-like 20 (Drosophila)
mm9_v1_chr8_+_47254909_47254909	0.829538	FOXD3.p2	BC058092|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	NM_025747|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene
mm9_v1_chr6_+_127022919_127023047	0.827941	FOXD3.p2	AK155687|Fgf23|64654|fibroblast growth factor 23	NM_022657|Fgf23|64654|fibroblast growth factor 23	AF263536|Fgf23|64654|fibroblast growth factor 23	BC120605|Fgf23|64654|fibroblast growth factor 23	AB037889|Fgf23|64654|fibroblast growth factor 23
mm9_v1_chr1_+_169238849_169238926	0.827548	FOXD3.p2	AK162344|Tmco1|68944|transmembrane and coiled-coil domains 1	AK037709|Tmco1|68944|transmembrane and coiled-coil domains 1	BC019761|Tmco1|68944|transmembrane and coiled-coil domains 1	BC020098|Tmco1|68944|transmembrane and coiled-coil domains 1	BC011457|Tmco1|68944|transmembrane and coiled-coil domains 1
mm9_v1_chr8_-_96560811_96560953	0.825859	FOXD3.p2	AK204985|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC090834|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK146419|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK160147|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK012308|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK020150|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK019433|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK147061|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC008270|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK011688|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_026623|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm9_v1_chr2_-_26092876_26092939	0.8251	FOXD3.p2	AK157992|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK140324|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK165642|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	BC030934|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	NM_153559|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2
mm9_v1_chr7_-_31017047_31017047	0.824516	FOXD3.p2	NM_025548|Tbcb|66411|tubulin folding cofactor B
mm9_v1_chr16_-_15863310_15863463	0.823622	FOXD3.p2	BC027550|Mzt2|72083|mitotic spindle organizing protein 2	AK010544|Mzt2|72083|mitotic spindle organizing protein 2	NM_029354|Mzt2|72083|mitotic spindle organizing protein 2	AK011255|Mzt2|72083|mitotic spindle organizing protein 2
mm9_v1_chr6_-_134847832_134848056	0.818976	FOXD3.p2	NM_001167695|Gpr19|14760|G protein-coupled receptor 19	NM_001167696|Gpr19|14760|G protein-coupled receptor 19	BC021648|Gpr19|14760|G protein-coupled receptor 19	AK132917|Gpr19|14760|G protein-coupled receptor 19	AK140770|Gpr19|14760|G protein-coupled receptor 19	AK160688|Gpr19|14760|G protein-coupled receptor 19	NM_001167693|Gpr19|14760|G protein-coupled receptor 19	NM_001167694|Gpr19|14760|G protein-coupled receptor 19	NM_001167700|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr5_+_65361309_65361366	0.818066	FOXD3.p2	AM162548|Fam114a1|68303|family with sequence similarity 114, member A1	BC110359|Fam114a1|68303|family with sequence similarity 114, member A1	AK030360|Fam114a1|68303|family with sequence similarity 114, member A1	NM_026667|Fam114a1|68303|family with sequence similarity 114, member A1	AK014725|Fam114a1|68303|family with sequence similarity 114, member A1	BC027235|Fam114a1|68303|family with sequence similarity 114, member A1	AK020262|Fam114a1|68303|family with sequence similarity 114, member A1	AK007950|Fam114a1|68303|family with sequence similarity 114, member A1	AK017336|Fam114a1|68303|family with sequence similarity 114, member A1	BC089499|Fam114a1|68303|family with sequence similarity 114, member A1
mm9_v1_chr3_-_10301182_10301182	0.817472	FOXD3.p2	BC030910|Fabp12|75497|fatty acid binding protein 12	NM_029310|Fabp12|75497|fatty acid binding protein 12
mm9_v1_chr5_+_151062363_151062504	0.816999	FOXD3.p2	NM_172887|Fry|320365|furry homolog (Drosophila)
mm9_v1_chr1_-_190831705_190831735	0.816032	FOXD3.p2	BC079581|Kctd3|226823|potassium channel tetramerisation domain containing 3	BC061458|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK049362|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK034380|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK087865|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK139700|Kctd3|226823|potassium channel tetramerisation domain containing 3	NM_172650|Kctd3|226823|potassium channel tetramerisation domain containing 3	AK033491|Kctd3|226823|potassium channel tetramerisation domain containing 3
mm9_v1_chr13_+_120251565_120251614	0.814591	FOXD3.p2	AK008565|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_001113550|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_026127|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008588|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK149119|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK020163|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK146515|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK014735|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC021327|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK017802|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK160863|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008746|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC028328|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK215837|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene
mm9_v1_chr5_-_140797483_140797532	0.814524	FOXD3.p2	AK200567|Mad1l1|17120|mitotic arrest deficient 1-like 1	AF083812|Mad1l1|17120|mitotic arrest deficient 1-like 1	AF083813|Mad1l1|17120|mitotic arrest deficient 1-like 1	BC010702|Mad1l1|17120|mitotic arrest deficient 1-like 1	AK136981|Mad1l1|17120|mitotic arrest deficient 1-like 1	NM_010752|Mad1l1|17120|mitotic arrest deficient 1-like 1
mm9_v1_chr5_+_122298977_122299040	0.813587	FOXD3.p2	AK039192|Fam109a|231717|family with sequence similarity 109, member A	AK033618|Fam109a|231717|family with sequence similarity 109, member A	NM_175474|Fam109a|231717|family with sequence similarity 109, member A
mm9_v1_chr2_+_58607580_58607600	0.813476	FOXD3.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr2_-_120346171_120346284	0.812169	FOXD3.p2	AF060245|Zfp106|20402|zinc finger protein 106	AK029313|Zfp106|20402|zinc finger protein 106
mm9_v1_chr12_+_84861415_84861438	0.811598	FOXD3.p2	NM_030246|Dcaf4|73828|DDB1 and CUL4 associated factor 4
mm9_v1_chr3_-_104580464_104580464	0.811052	FOXD3.p2	AK078681|Fam19a3|329731|family with sequence similarity 19, member A3	NM_183224|Fam19a3|329731|family with sequence similarity 19, member A3
mm9_v1_chr6_-_94233855_94233910	0.810311	FOXD3.p2	AK046635|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC095943|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001029850|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_010367|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK147358|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr2_-_144096164_144096250	0.809262	FOXD3.p2	AK159904|Snx5|69178|sorting nexin 5	AK167362|Snx5|69178|sorting nexin 5
mm9_v1_chr17_+_25960571_25960660	0.808319	FOXD3.p2	NM_173741|Wdr24|268933|WD repeat domain 24	AK078694|Wdr24|268933|WD repeat domain 24	AK170253|Wdr24|268933|WD repeat domain 24	BC037651|Wdr24|268933|WD repeat domain 24
mm9_v1_chr11_-_43561446_43561512	0.806635	FOXD3.p2	AK019021|Ttc1|66827|tetratricopeptide repeat domain 1	BC010236|Ttc1|66827|tetratricopeptide repeat domain 1	NM_133795|Ttc1|66827|tetratricopeptide repeat domain 1	AK166431|Ttc1|66827|tetratricopeptide repeat domain 1	AK170032|Ttc1|66827|tetratricopeptide repeat domain 1	AK170230|Ttc1|66827|tetratricopeptide repeat domain 1	AK077715|Ttc1|66827|tetratricopeptide repeat domain 1
mm9_v1_chr10_-_61842599_61842655	0.805986	FOXD3.p2	EU430531|Hk1|15275|hexokinase 1	EU430532|Hk1|15275|hexokinase 1	EU430533|Hk1|15275|hexokinase 1	L16949|Hk1|15275|hexokinase 1	NM_010438|Hk1|15275|hexokinase 1
mm9_v1_chr6_+_104443037_104443047	0.805479	FOXD3.p2	BC076594|Cntn6|53870|contactin 6	NM_017383|Cntn6|53870|contactin 6
mm9_v1_chr16_-_23988680_23988725	0.80513	FOXD3.p2	D38377|Bcl6|12053|B-cell leukemia/lymphoma 6	BC052315|Bcl6|12053|B-cell leukemia/lymphoma 6	NM_009744|Bcl6|12053|B-cell leukemia/lymphoma 6	AK039228|Bcl6|12053|B-cell leukemia/lymphoma 6	AK036975|Bcl6|12053|B-cell leukemia/lymphoma 6	AK151229|Bcl6|12053|B-cell leukemia/lymphoma 6
mm9_v1_chr16_-_38445988_38446143	0.803399	FOXD3.p2	AK003751|Adprh|11544|ADP-ribosylarginine hydrolase
mm9_v1_chr8_+_28134259_28134401	0.803066	FOXD3.p2	BC036333|Erlin2|244373|ER lipid raft associated 2	AK030557|Erlin2|244373|ER lipid raft associated 2	BC038374|Erlin2|244373|ER lipid raft associated 2	NM_153592|Erlin2|244373|ER lipid raft associated 2
mm9_v1_chr2_-_84490666_84490763	0.803014	FOXD3.p2	NM_001085453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC046589|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr10_+_33624916_33624916	0.80267	FOXD3.p2	BC138000|Rsph4a|212892|radial spoke head 4 homolog A (Chlamydomonas)	BC138001|Rsph4a|212892|radial spoke head 4 homolog A (Chlamydomonas)	NM_001162957|Rsph4a|212892|radial spoke head 4 homolog A (Chlamydomonas)
mm9_v1_chr2_-_164082375_164082378	0.801796	FOXD3.p2	AK035235|Svs3b|329557|seminal vesicle secretory protein 3B	NM_173377|Svs3b|329557|seminal vesicle secretory protein 3B
mm9_v1_chr11_-_116167956_116168087	0.801349	FOXD3.p2	AF014461|Exoc7|53413|exocyst complex component 7	AK140450|Exoc7|53413|exocyst complex component 7	BC053710|Exoc7|53413|exocyst complex component 7	BC028927|Exoc7|53413|exocyst complex component 7	AK167769|Exoc7|53413|exocyst complex component 7	AK162868|Exoc7|53413|exocyst complex component 7	AK169928|Exoc7|53413|exocyst complex component 7	AK087601|Exoc7|53413|exocyst complex component 7	NM_001162872|Exoc7|53413|exocyst complex component 7	NM_016857|Exoc7|53413|exocyst complex component 7
mm9_v1_chr7_-_104873414_104873481	0.798567	FOXD3.p2	
mm9_v1_chr3_+_63099793_63099793	0.797799	FOXD3.p2	AK031446|Mme|17380|membrane metallo endopeptidase	NM_008604|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr5_-_116252183_116252221	0.797538	FOXD3.p2	BC002062|Rpl29|19944|ribosomal protein L29	BC019179|Rpl29|19944|ribosomal protein L29	BC082292|Rpl29|19944|ribosomal protein L29	L08651|Rpl29|19944|ribosomal protein L29	BC096575|Rpl29|19944|ribosomal protein L29	BC094039|Rpl29|19944|ribosomal protein L29	AK088551|Rpl29|19944|ribosomal protein L29
mm9_v1_chr14_+_103912557_103912637	0.797406	FOXD3.p2	NM_022886|Scel|64929|sciellin	AF245700|Scel|64929|sciellin	BC025142|Scel|64929|sciellin	BC112380|Scel|64929|sciellin	AK020346|Scel|64929|sciellin	BC111874|Scel|64929|sciellin
mm9_v1_chr3_+_13471643_13471656	0.795768	FOXD3.p2	NM_001163328|Ralyl|76897|RALY RNA binding protein-like	NM_178631|Ralyl|76897|RALY RNA binding protein-like
mm9_v1_chr1_+_157405657_157405756	0.795546	FOXD3.p2	BC115580|Acbd6|72482|acyl-Coenzyme A binding domain containing 6	BC115581|Acbd6|72482|acyl-Coenzyme A binding domain containing 6
mm9_v1_chr17_-_12868558_12868577	0.794974	FOXD3.p2	U38652|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1	AF010259|Slc22a1|20517|solute carrier family 22 (organic cation transporter), member 1
mm9_v1_chr1_+_85196183_85196282	0.794275	FOXD3.p2	AK156961|Csprs|114564|component of Sp100-rs	NM_001081746|Gm7609|665378|predicted pseudogene 7609	X82357|Csprs|114564|component of Sp100-rs	BC059276|Gm7609|665378|predicted pseudogene 7609
mm9_v1_chr10_-_127807092_127807092	0.79375	FOXD3.p2	NM_001081040|Coq10a|210582|coenzyme Q10 homolog A (yeast)
mm9_v1_chr8_+_109867910_109868036	0.793242	FOXD3.p2	
mm9_v1_chr10_-_30375572_30375672	0.792219	FOXD3.p2	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr1_-_138242666_138242682	0.791344	FOXD3.p2	AK016014|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK028542|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK053092|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	NM_001081360|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1
mm9_v1_chr10_+_25079661_25079716	0.790443	FOXD3.p2	AK170275|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK167434|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	BC023768|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK052475|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr1_-_173177236_173177237	0.788358	FOXD3.p2	AK150431|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	AK165426|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr9_+_110235922_110235986	0.787567	FOXD3.p2	AK035432|Scap|235623|SREBF chaperone
mm9_v1_chr10_+_42481292_42481301	0.785766	FOXD3.p2	BC059816|Sec63|140740|SEC63-like (S. cerevisiae)	NM_153055|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr4_-_42770030_42770057	0.785347	FOXD3.p2	BC051472|Ccl19|24047|chemokine (C-C motif) ligand 19	AF059208|Ccl19|24047|chemokine (C-C motif) ligand 19	NM_011888|Ccl19|24047|chemokine (C-C motif) ligand 19	AK144337|Ccl19|24047|chemokine (C-C motif) ligand 19
mm9_v1_chr19_-_29095519_29095616	0.783686	FOXD3.p2	
mm9_v1_chr1_-_191746072_191746205	0.783053	FOXD3.p2	AK197062|Smyd2|226830|SET and MYND domain containing 2	AK204951|Smyd2|226830|SET and MYND domain containing 2	AK164053|Smyd2|226830|SET and MYND domain containing 2	BC023119|Smyd2|226830|SET and MYND domain containing 2	NM_026796|Smyd2|226830|SET and MYND domain containing 2	AK145261|Smyd2|226830|SET and MYND domain containing 2	AK150857|Smyd2|226830|SET and MYND domain containing 2
mm9_v1_chr14_-_41827037_41827078	0.780828	FOXD3.p2	BC056635|5730469M10Rik|70564|RIKEN cDNA 5730469M10 gene	AK017688|5730469M10Rik|70564|RIKEN cDNA 5730469M10 gene	NM_027464|5730469M10Rik|70564|RIKEN cDNA 5730469M10 gene	AK156326|5730469M10Rik|70564|RIKEN cDNA 5730469M10 gene
mm9_v1_chr13_-_4608352_4608430	0.778997	FOXD3.p2	U68535|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK002507|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK007924|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK028605|Akr1e1|56043|aldo-keto reductase family 1, member E1	BC012692|Akr1e1|56043|aldo-keto reductase family 1, member E1	NM_018859|Akr1e1|56043|aldo-keto reductase family 1, member E1
mm9_v1_chr11_-_21471767_21471820	0.777995	FOXD3.p2	AK168545|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK002404|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	BC050940|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK008270|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK002395|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	M29462|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK164785|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK077724|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)	AK046369|Mdh1|17449|malate dehydrogenase 1, NAD (soluble)
mm9_v1_chr1_-_74350713_74350779	0.775984	FOXD3.p2	AK170625|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK077689|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK144110|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK171102|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK152864|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1
mm9_v1_chr7_+_138703898_138703948	0.775127	FOXD3.p2	AK088534|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK138004|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	NM_009774|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	U67327|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	BC086790|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK190618|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr14_-_104242892_104242969	0.773827	FOXD3.p2	U32329|Ednrb|13618|endothelin receptor type B	AK085165|Ednrb|13618|endothelin receptor type B	AK076426|Ednrb|13618|endothelin receptor type B	AK085532|Ednrb|13618|endothelin receptor type B	NM_007904|Ednrb|13618|endothelin receptor type B
mm9_v1_chr9_+_22215956_22216031	0.773471	FOXD3.p2	AK220359|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	AK021129|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	AK170604|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	BC054761|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	NM_026739|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene
mm9_v1_chr7_+_138554108_138554177	0.77141	FOXD3.p2	NM_025826|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK131628|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC054428|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain
mm9_v1_chr9_+_21903702_21903764	0.770643	FOXD3.p2	Z19542|Cnn1|12797|calponin 1	AK035548|Cnn1|12797|calponin 1	BC138863|Cnn1|12797|calponin 1	BC138864|Cnn1|12797|calponin 1	BC145446|Cnn1|12797|calponin 1
mm9_v1_chr10_+_80720251_80720289	0.770116	FOXD3.p2	AK079816|Matk|17179|megakaryocyte-associated tyrosine kinase	U05210|Matk|17179|megakaryocyte-associated tyrosine kinase	L27738|Matk|17179|megakaryocyte-associated tyrosine kinase	NM_010768|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr10_+_13685882_13685927	0.769867	FOXD3.p2	AK147419|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr5_+_34001199_34001347	0.768981	FOXD3.p2	AK160291|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	AK145556|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	AF156934|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	BC003252|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	BC066184|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	BC068314|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	AF093542|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	AF203445|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	AF203446|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	AF247674|Tacc3|21335|transforming, acidic coiled-coil containing protein 3
mm9_v1_chr12_-_13227172_13227259	0.767724	FOXD3.p2	
mm9_v1_chr19_-_8872918_8873082	0.766918	FOXD3.p2	BC055278|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK010687|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK020719|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK013134|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK017473|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK011627|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	NM_026329|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	BC005580|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK007892|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G
mm9_v1_chr3_+_98084352_98084426	0.763471	FOXD3.p2	NM_008256|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004865|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004902|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK098104|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC014714|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC024744|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
mm9_v1_chr6_+_29298117_29298193	0.762267	FOXD3.p2	AK163674|Calu|12321|calumenin	NM_007594|Calu|12321|calumenin	NM_184053|Calu|12321|calumenin	AK035600|Calu|12321|calumenin	BC051423|Calu|12321|calumenin	AK032402|Calu|12321|calumenin	AK147756|Calu|12321|calumenin	AK160795|Calu|12321|calumenin	AK161807|Calu|12321|calumenin	AK166705|Calu|12321|calumenin	AK148178|Calu|12321|calumenin	AY225334|Calu|12321|calumenin	U81829|Calu|12321|calumenin	AK135295|Calu|12321|calumenin
mm9_v1_chr4_-_82666973_82667005	0.761966	FOXD3.p2	BC138427|Frem1|329872|Fras1 related extracellular matrix protein 1	BC145274|Frem1|329872|Fras1 related extracellular matrix protein 1	AJ616838|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_177863|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr5_-_124804519_124804530	0.760483	FOXD3.p2	BC147052|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	BC147053|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr5_+_114454810_114454816	0.757575	FOXD3.p2	BC018377|Dao|13142|D-amino acid oxidase
mm9_v1_chr8_+_73051648_73051650	0.755744	FOXD3.p2	AK153000|Fkbp8|14232|FK506 binding protein 8	AK165281|Fkbp8|14232|FK506 binding protein 8	AK146122|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr10_+_80720191_80720236	0.754615	FOXD3.p2	AK018182|Matk|17179|megakaryocyte-associated tyrosine kinase	AK013606|Matk|17179|megakaryocyte-associated tyrosine kinase	S77473|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr1_-_181476342_181476404	0.752817	FOXD3.p2	BC138836|Tfb2m|15278|transcription factor B2, mitochondrial	BC138837|Tfb2m|15278|transcription factor B2, mitochondrial	AK167930|Tfb2m|15278|transcription factor B2, mitochondrial	M74555|Tfb2m|15278|transcription factor B2, mitochondrial	AK090106|Tfb2m|15278|transcription factor B2, mitochondrial	AK168970|Tfb2m|15278|transcription factor B2, mitochondrial	AK169138|Tfb2m|15278|transcription factor B2, mitochondrial	AK166717|Tfb2m|15278|transcription factor B2, mitochondrial	AK146563|Tfb2m|15278|transcription factor B2, mitochondrial	NM_008249|Tfb2m|15278|transcription factor B2, mitochondrial
mm9_v1_chr11_+_46385014_46385159	0.752805	FOXD3.p2	NM_001025435|BC053393|407814|cDNA sequence BC053393	BC052651|BC053393|407814|cDNA sequence BC053393	AK166706|BC053393|407814|cDNA sequence BC053393	AK166838|BC053393|407814|cDNA sequence BC053393	AK145729|BC053393|407814|cDNA sequence BC053393	AK140690|BC053393|407814|cDNA sequence BC053393
mm9_v1_chr3_-_92730151_92730169	0.752667	FOXD3.p2	BC100538|Lce3a|545548|late cornified envelope 3A	NM_001039594|Lce3a|545548|late cornified envelope 3A
mm9_v1_chr15_+_76502061_76502174	0.751339	FOXD3.p2	BC096620|Ppp1r16a|73062|protein phosphatase 1, regulatory (inhibitor) subunit 16A	NM_033371|Ppp1r16a|73062|protein phosphatase 1, regulatory (inhibitor) subunit 16A	AK154865|Ppp1r16a|73062|protein phosphatase 1, regulatory (inhibitor) subunit 16A	AK171452|Ppp1r16a|73062|protein phosphatase 1, regulatory (inhibitor) subunit 16A
mm9_v1_chr9_+_109954534_109954609	0.750895	FOXD3.p2	AK138416|Mtap4|17758|microtubule-associated protein 4	AK146790|Mtap4|17758|microtubule-associated protein 4	BC042645|Mtap4|17758|microtubule-associated protein 4	AK134996|Mtap4|17758|microtubule-associated protein 4
mm9_v1_chr4_-_60083171_60083243	0.7504	FOXD3.p2	EU882230|Mup7|100041658|major urinary protein 7	BC092254|Mup1|17840|major urinary protein 1	BC091744|Mup1|17840|major urinary protein 1	BC100586|Mup1|17840|major urinary protein 1
mm9_v1_chr15_-_79158683_79158800	0.749955	FOXD3.p2	NM_001199023|Pla2g6|53357|phospholipase A2, group VI	NM_001199024|Pla2g6|53357|phospholipase A2, group VI	NM_001199025|Pla2g6|53357|phospholipase A2, group VI	NM_016915|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr11_-_120298946_120299015	0.749199	FOXD3.p2	BC065156|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK149823|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK129375|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK141998|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	AK149912|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	NM_001195023|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)	NM_199469|Nploc4|217365|nuclear protein localization 4 homolog (S. cerevisiae)
mm9_v1_chr6_+_71781393_71781440	0.748748	FOXD3.p2	AK033126|Immt|76614|inner membrane protein, mitochondrial	AK163491|Immt|76614|inner membrane protein, mitochondrial	AK169365|Immt|76614|inner membrane protein, mitochondrial	AK201051|Immt|76614|inner membrane protein, mitochondrial
mm9_v1_chr7_-_35098515_35098544	0.748165	FOXD3.p2	AK170198|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr3_-_95675399_95675461	0.748012	FOXD3.p2	AK008293|Mrps21|66292|mitochondrial ribosomal protein S21	AB049956|Mrps21|66292|mitochondrial ribosomal protein S21	AK002588|Mrps21|66292|mitochondrial ribosomal protein S21	AK007662|Mrps21|66292|mitochondrial ribosomal protein S21	AK009703|Mrps21|66292|mitochondrial ribosomal protein S21	AK008265|Mrps21|66292|mitochondrial ribosomal protein S21
mm9_v1_chr6_+_41810237_41810337	0.746785	FOXD3.p2	BC119343|Sval2|84543|seminal vesicle antigen-like 2	BC119345|Sval2|84543|seminal vesicle antigen-like 2	AB050614|Sval2|84543|seminal vesicle antigen-like 2	NM_032542|Sval2|84543|seminal vesicle antigen-like 2
mm9_v1_chr11_-_69485800_69485832	0.746368	FOXD3.p2	BC099392|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC012282|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC049915|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169030|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166527|Eif4a1|13681|eukaryotic translation initiation factor 4A1	X03039|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK159643|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167205|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168697|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169156|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK011529|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK077429|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135752|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135994|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK144850|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146464|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166439|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167003|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167083|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167988|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168780|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169023|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169057|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169279|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166572|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK088124|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145375|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145508|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146424|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK152694|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK162017|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166674|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167196|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167906|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK010644|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr13_+_97158248_97158334	0.746259	FOXD3.p2	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr10_-_88289526_88289560	0.746181	FOXD3.p2	AK145554|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)	BC084586|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)	NM_175158|Utp20|70683|UTP20, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr2_-_34681496_34681692	0.746155	FOXD3.p2	X54352|Fbxw2|30050|F-box and WD-40 domain protein 2	AK009893|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr11_+_120459958_120460039	0.744415	FOXD3.p2	BC023039|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr7_+_138554180_138554255	0.743098	FOXD3.p2	BC044826|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK004889|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK076535|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	AK152325|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC011235|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain	BC035231|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain
mm9_v1_chr4_-_126210701_126210715	0.740986	FOXD3.p2	NM_153177|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4	AK030018|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4
mm9_v1_chr14_-_52898946_52899069	0.740593	FOXD3.p2	AK044202|Rab2b|76338|RAB2B, member RAS oncogene family	BC033312|Rab2b|76338|RAB2B, member RAS oncogene family	AK005230|Rab2b|76338|RAB2B, member RAS oncogene family	BC054719|Rab2b|76338|RAB2B, member RAS oncogene family	AK038393|Rab2b|76338|RAB2B, member RAS oncogene family	AK038576|Rab2b|76338|RAB2B, member RAS oncogene family	AK169657|Rab2b|76338|RAB2B, member RAS oncogene family	BC046334|Rab2b|76338|RAB2B, member RAS oncogene family	NM_172601|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr3_-_73512139_73512177	0.740551	FOXD3.p2	AK052200|Bche|12038|butyrylcholinesterase	BC099977|Bche|12038|butyrylcholinesterase
mm9_v1_chr4_+_137818150_137818165	0.740266	FOXD3.p2	AB008867|Kif17|16559|kinesin family member 17	NM_001190978|Kif17|16559|kinesin family member 17	NM_010623|Kif17|16559|kinesin family member 17
mm9_v1_chr1_-_172815525_172815670	0.74026	FOXD3.p2	AK155026|Dusp12|80915|dual specificity phosphatase 12	AF280810|Dusp12|80915|dual specificity phosphatase 12	AF280811|Dusp12|80915|dual specificity phosphatase 12	AK004488|Dusp12|80915|dual specificity phosphatase 12	AK081862|Dusp12|80915|dual specificity phosphatase 12	AF268196|Dusp12|80915|dual specificity phosphatase 12	BC099453|Dusp12|80915|dual specificity phosphatase 12	NM_023173|Dusp12|80915|dual specificity phosphatase 12
mm9_v1_chrX_+_149932693_149932774	0.739227	FOXD3.p2	AK076159|Ubqln2|54609|ubiquilin 2	AF177346|Ubqln2|54609|ubiquilin 2	BC053022|Ubqln2|54609|ubiquilin 2	NM_018798|Ubqln2|54609|ubiquilin 2
mm9_v1_chr7_-_134160864_134160869	0.738037	FOXD3.p2	BC003932|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene	NM_030240|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr8_-_95803605_95803656	0.737433	FOXD3.p2	BC013479|Ces1f|234564|carboxylesterase 1F	AK136491|Ces1f|234564|carboxylesterase 1F	NM_144930|Ces1f|234564|carboxylesterase 1F
mm9_v1_chr19_-_6984541_6984611	0.737264	FOXD3.p2	AK009858|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr11_+_53270779_53270814	0.735715	FOXD3.p2	AK134332|Shroom1|71774|shroom family member 1	AK004934|Shroom1|71774|shroom family member 1	BC031598|Shroom1|71774|shroom family member 1
mm9_v1_chr4_+_33295965_33295965	0.735367	FOXD3.p2	AK046869|Srsf13b|272009|serine/arginine-rich splicing factor 13B	NM_177774|Srsf13b|272009|serine/arginine-rich splicing factor 13B
mm9_v1_chr3_+_157197301_157197382	0.734342	FOXD3.p2	AK150291|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK152536|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168613|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167983|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167766|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC049115|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168162|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169335|Zranb2|53861|zinc finger, RAN-binding domain containing 2	NM_017381|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146275|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK160862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167756|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168033|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC132547|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC138575|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK166534|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169114|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146854|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AF133818|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr11_-_80191504_80191518	0.732023	FOXD3.p2	BC044897|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK153246|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK078548|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	NM_027472|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene
mm9_v1_chr19_-_45892512_45892542	0.730059	FOXD3.p2	
mm9_v1_chr11_-_80191456_80191500	0.72902	FOXD3.p2	AK135352|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	AK017667|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene	BC055024|5730455P16Rik|70591|RIKEN cDNA 5730455P16 gene
mm9_v1_chr6_-_124706020_124706061	0.728072	FOXD3.p2	BC053051|Atn1|13498|atrophin 1
mm9_v1_chr7_-_20355880_20355889	0.72615	FOXD3.p2	AF109160|Bcam|57278|basal cell adhesion molecule	NM_020486|Bcam|57278|basal cell adhesion molecule
mm9_v1_chr8_+_23337748_23337837	0.725766	FOXD3.p2	BC029898|Thsd1|56229|thrombospondin, type I, domain 1	AK049636|Thsd1|56229|thrombospondin, type I, domain 1	BC051957|Thsd1|56229|thrombospondin, type I, domain 1	AK052555|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr6_-_52168571_52168571	0.725083	FOXD3.p2	NM_010455|Hoxa7|15404|homeobox A7
mm9_v1_chr11_+_46337752_46337752	0.7249	FOXD3.p2	NM_001163357|Gm12169|210535|predicted gene 12169
mm9_v1_chr10_+_45009110_45009287	0.724841	FOXD3.p2	AK052325|Popdc3|78977|popeye domain containing 3	NM_024286|Popdc3|78977|popeye domain containing 3	AK039691|Popdc3|78977|popeye domain containing 3	BC114993|Popdc3|78977|popeye domain containing 3
mm9_v1_chr4_+_108000728_108000805	0.72472	FOXD3.p2	AK081388|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK044999|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	NM_027250|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK008518|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK168902|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK168344|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	BC012391|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene
mm9_v1_chr3_-_94277495_94277512	0.724702	FOXD3.p2	BC107021|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	AK009192|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	NM_025506|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
mm9_v1_chr13_+_59686602_59686637	0.724508	FOXD3.p2	AK021042|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr19_+_4099973_4100180	0.723949	FOXD3.p2	AK155377|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AF006467|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	NM_001136078|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK177924|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK179862|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK181080|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK188056|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK188611|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK208861|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK210105|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK210471|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK212060|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	AK187966|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chr18_+_20823908_20823925	0.723685	FOXD3.p2	AK018701|Ttr|22139|transthyretin	AK014454|Ttr|22139|transthyretin	AK075588|Ttr|22139|transthyretin	BC086926|Ttr|22139|transthyretin	D89076|Ttr|22139|transthyretin	X03351|Ttr|22139|transthyretin	AK050155|Ttr|22139|transthyretin	BC032069|Ttr|22139|transthyretin
mm9_v1_chr14_+_120830603_120830641	0.723531	FOXD3.p2	AK003316|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr19_+_29038435_29038489	0.722558	FOXD3.p2	BC052412|Ppapdc2|74411|phosphatidic acid phosphatase type 2 domain containing 2
mm9_v1_chr1_-_38721799_38721808	0.721619	FOXD3.p2	AK046648|Aff3|16764|AF4/FMR2 family, member 3	NM_010678|Aff3|16764|AF4/FMR2 family, member 3
mm9_v1_chr16_+_96366980_96367038	0.721353	FOXD3.p2	AK084688|Wrb|71446|tryptophan rich basic protein	AK172079|Wrb|71446|tryptophan rich basic protein	BC031769|Wrb|71446|tryptophan rich basic protein	NM_207301|Wrb|71446|tryptophan rich basic protein	AK021091|Wrb|71446|tryptophan rich basic protein
mm9_v1_chr18_-_64676144_64676158	0.721259	FOXD3.p2	BC052849|Nars|70223|asparaginyl-tRNA synthetase
mm9_v1_chr7_-_106855343_106855351	0.72123	FOXD3.p2	AK087682|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1	AK163542|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1	AK132394|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1
mm9_v1_chr4_+_126530769_126530837	0.720334	FOXD3.p2	
mm9_v1_chr8_+_37552244_37552244	0.719117	FOXD3.p2	BC052184|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene	NM_176952|6430573F11Rik|319582|RIKEN cDNA 6430573F11 gene
mm9_v1_chr1_-_173177232_173177235	0.719054	FOXD3.p2	AK168971|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr16_-_30550622_30550663	0.717439	FOXD3.p2	AK031524|Tmem44|224090|transmembrane protein 44	AK045675|Tmem44|224090|transmembrane protein 44	AK048655|Tmem44|224090|transmembrane protein 44	NM_172614|Tmem44|224090|transmembrane protein 44
mm9_v1_chr3_-_94910762_94910779	0.717345	FOXD3.p2	BC031774|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	NM_008847|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr16_-_38713106_38713149	0.716416	FOXD3.p2	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr10_+_57718246_57718291	0.714517	FOXD3.p2	AK008992|Gcc2|70297|GRIP and coiled-coil domain containing 2	AK011206|Gcc2|70297|GRIP and coiled-coil domain containing 2	AK045701|Gcc2|70297|GRIP and coiled-coil domain containing 2	NM_027375|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC139007|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC145495|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC027339|Gcc2|70297|GRIP and coiled-coil domain containing 2
mm9_v1_chr8_+_58773321_58773362	0.71427	FOXD3.p2	NM_008278|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)
mm9_v1_chr14_+_80400057_80400108	0.712469	FOXD3.p2	BC141127|Olfm4|380924|olfactomedin 4	BC145436|Olfm4|380924|olfactomedin 4	AK133536|Olfm4|380924|olfactomedin 4	NM_001030294|Olfm4|380924|olfactomedin 4
mm9_v1_chr15_+_79501284_79501317	0.711601	FOXD3.p2	AK008133|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK009868|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	NM_172609|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150787|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK013471|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK049442|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150360|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK152843|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK167803|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	BC056920|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr5_-_101103051_101103304	0.711473	FOXD3.p2	BC080773|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK009092|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	NM_027978|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr16_+_14906698_14906846	0.711077	FOXD3.p2	AK042748|Efcab1|66793|EF hand calcium binding domain 1	AK015866|Efcab1|66793|EF hand calcium binding domain 1	AK030381|Efcab1|66793|EF hand calcium binding domain 1	AK038735|Efcab1|66793|EF hand calcium binding domain 1	AK077722|Efcab1|66793|EF hand calcium binding domain 1	AK017267|Efcab1|66793|EF hand calcium binding domain 1	NM_025769|Efcab1|66793|EF hand calcium binding domain 1	AK015426|Efcab1|66793|EF hand calcium binding domain 1	AK043519|Efcab1|66793|EF hand calcium binding domain 1	BC085167|Efcab1|66793|EF hand calcium binding domain 1
mm9_v1_chr7_-_150927867_150927867	0.710854	FOXD3.p2	AJ278263|Osbpl5|79196|oxysterol binding protein-like 5	NM_024289|Osbpl5|79196|oxysterol binding protein-like 5
mm9_v1_chr19_-_43827386_43827505	0.710786	FOXD3.p2	AK051792|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	BC021498|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	AK141631|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	BC011509|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	AK048099|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	NM_144874|Cox15|226139|COX15 homolog, cytochrome c oxidase assembly protein (yeast)
mm9_v1_chr1_-_74350909_74350946	0.710196	FOXD3.p2	NM_027154|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK166926|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1	AK147297|Tmbim1|69660|transmembrane BAX inhibitor motif containing 1
mm9_v1_chr13_-_48608762_48608790	0.710055	FOXD3.p2	BC060222|Zfp169|67911|zinc finger protein 169	NM_001164575|Zfp169|67911|zinc finger protein 169
mm9_v1_chrX_+_160578411_160578593	0.709889	FOXD3.p2	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr11_+_29593657_29593773	0.709272	FOXD3.p2	AK211699|Rtn4|68585|reticulon 4	AK218123|Rtn4|68585|reticulon 4	AY102280|Rtn4|68585|reticulon 4	NM_194051|Rtn4|68585|reticulon 4
mm9_v1_chr2_+_34729897_34729955	0.708383	FOXD3.p2	AK033810|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	AK085616|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	NM_030021|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr14_+_27852148_27852279	0.708249	FOXD3.p2	AF494210|Il17rd|171463|interleukin 17 receptor D	NM_134437|Il17rd|171463|interleukin 17 receptor D	BC138629|Il17rd|171463|interleukin 17 receptor D	BC066804|Il17rd|171463|interleukin 17 receptor D	AF459444|Il17rd|171463|interleukin 17 receptor D
mm9_v1_chr15_-_54903657_54903709	0.70797	FOXD3.p2	BC147638|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC151079|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK147903|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001081288|Taf2|319944|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr3_+_88390817_88390831	0.707642	FOXD3.p2	AK217251|Ssr2|66256|signal sequence receptor, beta
mm9_v1_chr3_-_94910641_94910756	0.705918	FOXD3.p2	D86177|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK167816|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr9_+_21903696_21903696	0.705544	FOXD3.p2	NM_009922|Cnn1|12797|calponin 1
mm9_v1_chr9_-_36604816_36604957	0.705523	FOXD3.p2	AK147776|Ei24|13663|etoposide induced 2.4 mRNA	AK159927|Ei24|13663|etoposide induced 2.4 mRNA	AK145018|Ei24|13663|etoposide induced 2.4 mRNA	AK172233|Ei24|13663|etoposide induced 2.4 mRNA
mm9_v1_chr10_+_128258826_128258995	0.705084	FOXD3.p2	NM_025364|Sarnp|66118|SAP domain containing ribonucleoprotein	AK146248|Sarnp|66118|SAP domain containing ribonucleoprotein	AK018773|Sarnp|66118|SAP domain containing ribonucleoprotein	BC157909|Sarnp|66118|SAP domain containing ribonucleoprotein	BC158023|Sarnp|66118|SAP domain containing ribonucleoprotein	BC172063|Sarnp|66118|SAP domain containing ribonucleoprotein	AK003453|Sarnp|66118|SAP domain containing ribonucleoprotein	AK088266|Sarnp|66118|SAP domain containing ribonucleoprotein	BC027510|Sarnp|66118|SAP domain containing ribonucleoprotein	BC094393|Sarnp|66118|SAP domain containing ribonucleoprotein	AK212934|Sarnp|66118|SAP domain containing ribonucleoprotein
mm9_v1_chr13_-_76081142_76081219	0.704407	FOXD3.p2	AK139158|Rhobtb3|73296|Rho-related BTB domain containing 3	AK020938|Rhobtb3|73296|Rho-related BTB domain containing 3
mm9_v1_chr9_+_47338449_47338455	0.703951	FOXD3.p2	AK013775|Cadm1|54725|cell adhesion molecule 1	AB064265|Cadm1|54725|cell adhesion molecule 1	AB092414|Cadm1|54725|cell adhesion molecule 1	AB183399|Cadm1|54725|cell adhesion molecule 1	AB183400|Cadm1|54725|cell adhesion molecule 1	AB183401|Cadm1|54725|cell adhesion molecule 1	AB183402|Cadm1|54725|cell adhesion molecule 1	AY351388|Cadm1|54725|cell adhesion molecule 1	DQ279856|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr12_+_4134152_4134180	0.703679	FOXD3.p2	NM_138305|Adcy3|104111|adenylate cyclase 3	AF458089|Adcy3|104111|adenylate cyclase 3
mm9_v1_chr17_-_36034316_36034327	0.700558	FOXD3.p2	NM_001033630|2310061I04Rik|69662|RIKEN cDNA 2310061I04 gene
mm9_v1_chr4_+_34497840_34497946	0.697112	FOXD3.p2	NM_001007589|Akirin2|433693|akirin 2	BC082305|Akirin2|433693|akirin 2
mm9_v1_chr15_-_78994753_78994921	0.695821	FOXD3.p2	BC023356|Sox10|20665|SRY-box containing gene 10	BC051058|Sox10|20665|SRY-box containing gene 10	AK185165|Sox10|20665|SRY-box containing gene 10	AK193670|Sox10|20665|SRY-box containing gene 10	AK185297|Sox10|20665|SRY-box containing gene 10	BC025171|Sox10|20665|SRY-box containing gene 10	AK043220|Sox10|20665|SRY-box containing gene 10	U66141|Sox10|20665|SRY-box containing gene 10	AK042542|Sox10|20665|SRY-box containing gene 10	NM_011437|Sox10|20665|SRY-box containing gene 10
mm9_v1_chr4_+_115236321_115236321	0.69519	FOXD3.p2	NM_201640|Cyp4a31|666168|cytochrome P450, family 4, subfamily a, polypeptide 31
mm9_v1_chr12_+_78339071_78339134	0.692978	FOXD3.p2	BC010666|Fut8|53618|fucosyltransferase 8	AK051811|Fut8|53618|fucosyltransferase 8
mm9_v1_chr16_-_92697567_92697590	0.692477	FOXD3.p2	AK155262|Runx1|12394|runt related transcription factor 1	D26532|Runx1|12394|runt related transcription factor 1	NM_001111023|Runx1|12394|runt related transcription factor 1	NM_009821|Runx1|12394|runt related transcription factor 1
mm9_v1_chr8_+_72663358_72663370	0.689815	FOXD3.p2	AK033217|2310045N01Rik|72368|RIKEN cDNA 2310045N01 gene
mm9_v1_chr3_-_68808386_68808491	0.689665	FOXD3.p2	BC034101|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK042231|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK129339|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	AK147305|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)	NM_026641|Ift80|68259|intraflagellar transport 80 homolog (Chlamydomonas)
mm9_v1_chr7_+_52769075_52769124	0.689422	FOXD3.p2	NM_001045555|Tulp2|56734|tubby-like protein 2	NM_008807|Tulp2|56734|tubby-like protein 2	AK077200|Tulp2|56734|tubby-like protein 2	AF105712|Tulp2|56734|tubby-like protein 2
mm9_v1_chr5_-_137974398_137974535	0.688032	FOXD3.p2	BC062178|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK002604|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK151628|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	NM_010312|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	Y11970|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2	AK146941|Gnb2|14693|guanine nucleotide binding protein (G protein), beta 2
mm9_v1_chr5_-_110537170_110537204	0.688023	FOXD3.p2	AK159462|Gtpbp6|107999|GTP binding protein 6 (putative)
mm9_v1_chr6_-_82724366_82724447	0.687781	FOXD3.p2	BC054472|Hk2|15277|hexokinase 2	AJ238540|Hk2|15277|hexokinase 2	AK019092|Hk2|15277|hexokinase 2	AK145936|Hk2|15277|hexokinase 2	AK009328|Hk2|15277|hexokinase 2	NM_013820|Hk2|15277|hexokinase 2
mm9_v1_chr17_-_45705198_45705339	0.687477	FOXD3.p2	AK192311|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr6_+_146754051_146754051	0.687066	FOXD3.p2	AY005163|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	AY014836|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108965|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108966|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ322241|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ355143|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	NM_172309|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2
mm9_v1_chr6_+_94450307_94450362	0.686652	FOXD3.p2	NM_026255|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015299|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	AK015954|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC037142|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC019156|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	BC049899|Slc25a26|67582|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26
mm9_v1_chr9_-_7837059_7837079	0.686209	FOXD3.p2	AK021182|C330006D17Rik|77616|RIKEN cDNA C330006D17 gene
mm9_v1_chr2_+_157104738_157104878	0.685729	FOXD3.p2	AK018761|Rpn2|20014|ribophorin II	BC046806|Rpn2|20014|ribophorin II	AK004968|Rpn2|20014|ribophorin II	NM_019642|Rpn2|20014|ribophorin II
mm9_v1_chr9_+_37209586_37209656	0.684793	FOXD3.p2	BC071193|Robo4|74144|roundabout homolog 4 (Drosophila)	AF536772|Robo4|74144|roundabout homolog 4 (Drosophila)	AK004723|Robo4|74144|roundabout homolog 4 (Drosophila)	NM_028783|Robo4|74144|roundabout homolog 4 (Drosophila)	AK087355|Robo4|74144|roundabout homolog 4 (Drosophila)
mm9_v1_chr13_-_48608795_48608824	0.68408	FOXD3.p2	AK162962|Zfp169|67911|zinc finger protein 169	AK086737|Zfp169|67911|zinc finger protein 169	NM_001164576|Zfp169|67911|zinc finger protein 169	NM_026450|Zfp169|67911|zinc finger protein 169
mm9_v1_chr2_+_175639464_175639537	0.683655	FOXD3.p2	AK039408|Gm4724|100043915|predicted gene 4724	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	NM_001099349|Gm14308|100043381|predicted gene 14308	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr8_-_110112352_110112366	0.682598	FOXD3.p2	AK158379|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	BC130014|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	BC013513|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm9_v1_chr9_+_4383536_4383536	0.682073	FOXD3.p2	AK180204|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	BC014729|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene	NM_145609|8430410K20Rik|78100|RIKEN cDNA 8430410K20 gene
mm9_v1_chr6_+_79969636_79969636	0.680876	FOXD3.p2	NM_178731|Lrrtm4|243499|leucine rich repeat transmembrane neuronal 4
mm9_v1_chrX_+_20938001_20938025	0.680156	FOXD3.p2	BC137827|Gm5124|331392|predicted pseudogene 5124
mm9_v1_chr8_-_23763885_23763908	0.679961	FOXD3.p2	AF513911|Polb|18970|polymerase (DNA directed), beta	BC060998|Polb|18970|polymerase (DNA directed), beta	AK077127|Polb|18970|polymerase (DNA directed), beta	AK151436|Polb|18970|polymerase (DNA directed), beta	AK146745|Polb|18970|polymerase (DNA directed), beta	BC006681|Polb|18970|polymerase (DNA directed), beta	NM_011130|Polb|18970|polymerase (DNA directed), beta
mm9_v1_chr10_-_12683885_12684038	0.679524	FOXD3.p2	AK017897|Stx11|74732|syntaxin 11	AK171040|Stx11|74732|syntaxin 11	AK171663|Stx11|74732|syntaxin 11	AK153408|Stx11|74732|syntaxin 11
mm9_v1_chrX_-_133277456_133277461	0.679301	FOXD3.p2	NM_001168227|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr5_+_145005305_145005305	0.67854	FOXD3.p2	NM_001163709|Bri3|55950|brain protein I3
mm9_v1_chr13_+_85329004_85329091	0.677608	FOXD3.p2	AF287135|Ccnh|66671|cyclin H	AK137849|Ccnh|66671|cyclin H	AK078059|Ccnh|66671|cyclin H	NM_023243|Ccnh|66671|cyclin H
mm9_v1_chr5_+_54200903_54200980	0.676324	FOXD3.p2	BC020138|Tbc1d19|67249|TBC1 domain family, member 19	AK012836|Tbc1d19|67249|TBC1 domain family, member 19	AK076128|Tbc1d19|67249|TBC1 domain family, member 19	AK177065|Tbc1d19|67249|TBC1 domain family, member 19
mm9_v1_chr16_-_33967064_33967149	0.674998	FOXD3.p2	BC003887|Umps|22247|uridine monophosphate synthetase	BC095981|Umps|22247|uridine monophosphate synthetase	AK159808|Umps|22247|uridine monophosphate synthetase	AK159955|Umps|22247|uridine monophosphate synthetase	AK035821|Umps|22247|uridine monophosphate synthetase	AK035997|Umps|22247|uridine monophosphate synthetase	AK090102|Umps|22247|uridine monophosphate synthetase	AK135187|Umps|22247|uridine monophosphate synthetase	NM_009471|Umps|22247|uridine monophosphate synthetase
mm9_v1_chr2_-_163298253_163298393	0.674723	FOXD3.p2	AK036997|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK040900|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC064032|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK052945|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK163611|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC138522|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC138532|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK054016|Fitm2|228859|fat storage-inducing transmembrane protein 2	BC090994|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK043244|Fitm2|228859|fat storage-inducing transmembrane protein 2	AK080142|Fitm2|228859|fat storage-inducing transmembrane protein 2	NM_173397|Fitm2|228859|fat storage-inducing transmembrane protein 2
mm9_v1_chr1_-_77511577_77511645	0.674237	FOXD3.p2	BC004782|Epha4|13838|Eph receptor A4	BC052164|Epha4|13838|Eph receptor A4
mm9_v1_chr9_-_70269246_70269297	0.673763	FOXD3.p2	CT010286|Ccnb2|12442|cyclin B2	BC008247|Ccnb2|12442|cyclin B2
mm9_v1_chr6_+_106719113_106719221	0.673542	FOXD3.p2	AK135791|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK010662|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AB063106|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK152739|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	BC031764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	NM_027296|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK011764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK166804|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK139764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1
mm9_v1_chr11_+_86497484_86497540	0.672704	FOXD3.p2	NM_175004|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK028555|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK038888|Ptrh2|217057|peptidyl-tRNA hydrolase 2
mm9_v1_chr8_+_125589407_125589408	0.672033	FOXD3.p2	AK145540|Spg7|234847|spastic paraplegia 7 homolog (human)	AK171647|Spg7|234847|spastic paraplegia 7 homolog (human)	NM_153176|Spg7|234847|spastic paraplegia 7 homolog (human)
mm9_v1_chr14_+_67852128_67852128	0.670689	FOXD3.p2	AK053013|Ebf2|13592|early B-cell factor 2	NM_010095|Ebf2|13592|early B-cell factor 2
mm9_v1_chr8_+_119984482_119984512	0.670542	FOXD3.p2	AK020023|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr15_+_43308745_43308829	0.669653	FOXD3.p2	AK014989|Ttc35|66736|tetratricopeptide repeat domain 35	NM_025736|Ttc35|66736|tetratricopeptide repeat domain 35	AK015968|Ttc35|66736|tetratricopeptide repeat domain 35	BC004716|Ttc35|66736|tetratricopeptide repeat domain 35	AK172887|Ttc35|66736|tetratricopeptide repeat domain 35
mm9_v1_chr19_-_5771326_5771432	0.666017	FOXD3.p2	BC034519|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK144134|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK019240|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK134356|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK161813|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AF276514|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	NM_023912|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK145869|Scyl1|78891|SCY1-like 1 (S. cerevisiae)
mm9_v1_chr13_-_27759883_27759904	0.665402	FOXD3.p2	BC099468|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AF011382|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AF020524|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AK005455|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AK028068|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AK131665|Prl7a2|19114|prolactin family 7, subfamily a, member 2	NM_011168|Prl7a2|19114|prolactin family 7, subfamily a, member 2
mm9_v1_chr18_+_37602153_37602224	0.664897	FOXD3.p2	BC138123|Pcdhb13|93884|protocadherin beta 13	BC138124|Pcdhb13|93884|protocadherin beta 13	AK082435|Pcdhb13|93884|protocadherin beta 13	NM_053138|Pcdhb13|93884|protocadherin beta 13	AY013774|Pcdhb13|93884|protocadherin beta 13
mm9_v1_chr11_-_78020699_78020746	0.663111	FOXD3.p2	
mm9_v1_chr15_+_85036434_85036600	0.662138	FOXD3.p2	AK083573|Fbln1|14114|fibulin 1	AK086451|Fbln1|14114|fibulin 1	NM_010180|Fbln1|14114|fibulin 1	X70854|Fbln1|14114|fibulin 1	AK035388|Fbln1|14114|fibulin 1	AK159646|Fbln1|14114|fibulin 1	AK085989|Fbln1|14114|fibulin 1	AK137511|Fbln1|14114|fibulin 1	EU543224|Fbln1|14114|fibulin 1	BC007140|Fbln1|14114|fibulin 1	AK183901|Fbln1|14114|fibulin 1	AK188770|Fbln1|14114|fibulin 1
mm9_v1_chr13_-_54867800_54867840	0.661617	FOXD3.p2	BC019409|Sncb|104069|synuclein, beta	NM_033610|Sncb|104069|synuclein, beta
mm9_v1_chr6_+_135015679_135015703	0.659431	FOXD3.p2	NM_181444|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A	BC039217|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A
mm9_v1_chr12_+_4776100_4776256	0.658158	FOXD3.p2	AK013595|Pfn4|382562|profilin family, member 4	NM_028376|Pfn4|382562|profilin family, member 4	AY495949|Pfn4|382562|profilin family, member 4	BC116888|Pfn4|382562|profilin family, member 4	BC116890|Pfn4|382562|profilin family, member 4
mm9_v1_chr10_+_60880719_60880719	0.65798	FOXD3.p2	NM_013611|Nodal|18119|nodal	X70514|Nodal|18119|nodal
mm9_v1_chr9_+_56785271_56785306	0.657785	FOXD3.p2	AK004456|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC009145|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	NM_133976|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr7_-_23156057_23156057	0.657592	FOXD3.p2	NM_001166713|Gm5728|435949|predicted gene 5728	NM_001166751|Gm8660|667485|predicted gene 8660
mm9_v1_chr11_+_46049058_46049084	0.654474	FOXD3.p2	AK081240|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	NM_177075|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	BC104394|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene	BC104395|C030019I05Rik|320116|RIKEN cDNA C030019I05 gene
mm9_v1_chr11_-_120494842_120494902	0.653706	FOXD3.p2	BC052633|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	NM_010756|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm9_v1_chr17_-_80295336_80295462	0.652694	FOXD3.p2	AK135988|Atl2|56298|atlastin GTPase 2	BC060501|Atl2|56298|atlastin GTPase 2	NM_019717|Atl2|56298|atlastin GTPase 2	AK038697|Atl2|56298|atlastin GTPase 2	AK043907|Atl2|56298|atlastin GTPase 2	AK008381|Atl2|56298|atlastin GTPase 2	NM_178050|Atl2|56298|atlastin GTPase 2
mm9_v1_chr7_-_30691111_30691122	0.652115	FOXD3.p2	AK147732|Zfp27|22689|zinc finger protein 27	NM_001037707|Zfp27|22689|zinc finger protein 27	NM_011754|Zfp27|22689|zinc finger protein 27
mm9_v1_chr12_-_84938063_84938077	0.651847	FOXD3.p2	AK090334|Zfyve1|217695|zinc finger, FYVE domain containing 1
mm9_v1_chr5_-_105568547_105568604	0.651181	FOXD3.p2	AK220567|Gbp4|17472|guanylate binding protein 4	AK155365|Gbp8|76074|guanylate-binding protein 8	NM_008620|Gbp4|17472|guanylate binding protein 4	EF494423|Gbp4|17472|guanylate binding protein 4	EF494424|Gbp4|17472|guanylate binding protein 4
mm9_v1_chr18_+_75178416_75178439	0.650501	FOXD3.p2	NM_027727|Dym|69190|dymeclin	AK081242|Dym|69190|dymeclin	BC038276|Dym|69190|dymeclin	AK154794|Dym|69190|dymeclin	BC092283|Dym|69190|dymeclin
mm9_v1_chr2_+_29643739_29643849	0.650145	FOXD3.p2	BC139373|Coq4|227683|coenzyme Q4 homolog (yeast)	BC145615|Coq4|227683|coenzyme Q4 homolog (yeast)	BC139376|Coq4|227683|coenzyme Q4 homolog (yeast)	AK050459|Coq4|227683|coenzyme Q4 homolog (yeast)	AK039422|Coq4|227683|coenzyme Q4 homolog (yeast)	AK039676|Coq4|227683|coenzyme Q4 homolog (yeast)	NM_178693|Coq4|227683|coenzyme Q4 homolog (yeast)	AK043574|Coq4|227683|coenzyme Q4 homolog (yeast)
mm9_v1_chr12_-_104976324_104976338	0.650025	FOXD3.p2	BC022109|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B	BC025445|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr2_+_175737015_175737088	0.649271	FOXD3.p2	AK039408|Gm4724|100043915|predicted gene 4724	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	NM_001099349|Gm14308|100043381|predicted gene 14308	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene
mm9_v1_chr2_-_110203138_110203154	0.649067	FOXD3.p2	BC027250|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK003790|Fibin|67606|fin bud initiation factor homolog (zebrafish)	NM_026271|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr1_+_34906775_34906890	0.648988	FOXD3.p2	NM_145516|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK148653|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	BC057994|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK039771|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK166091|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AF189817|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK149868|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK150074|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK082118|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2	AK179998|Plekhb2|226971|pleckstrin homology domain containing, family B (evectins) member 2
mm9_v1_chr5_+_13399301_13399308	0.648811	FOXD3.p2	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr1_+_75479559_75479687	0.648737	FOXD3.p2	BC042776|Tmem198|319998|transmembrane protein 198	BC046546|Tmem198|319998|transmembrane protein 198
mm9_v1_chr1_-_83035005_83035022	0.648076	FOXD3.p2	BC109154|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	BC109155|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	AK098112|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	AF271634|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	NM_030556|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3
mm9_v1_chr13_+_23844213_23844248	0.641554	FOXD3.p2	NM_178203|Hist1h3b|319150|histone cluster 1, H3b
mm9_v1_chr8_+_125589362_125589405	0.6415	FOXD3.p2	AF512565|Spg7|234847|spastic paraplegia 7 homolog (human)
mm9_v1_chr18_-_35374531_35374610	0.640814	FOXD3.p2	AK043173|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046818|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK049920|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK043784|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr1_+_40496493_40496633	0.640489	FOXD3.p2	NM_010743|Il1rl1|17082|interleukin 1 receptor-like 1	AK033417|Il1rl1|17082|interleukin 1 receptor-like 1	AK145118|Il1rl1|17082|interleukin 1 receptor-like 1	Y07519|Il1rl1|17082|interleukin 1 receptor-like 1	M24843|Il1rl1|17082|interleukin 1 receptor-like 1
mm9_v1_chr11_+_121296252_121296285	0.640402	FOXD3.p2	NM_001038699|Fn3k|63828|fructosamine 3 kinase	NM_022014|Fn3k|63828|fructosamine 3 kinase	AK010151|Fn3k|63828|fructosamine 3 kinase	BC064710|Fn3k|63828|fructosamine 3 kinase	AJ404616|Fn3k|63828|fructosamine 3 kinase	AK030362|Fn3k|63828|fructosamine 3 kinase	AK172235|Fn3k|63828|fructosamine 3 kinase	BC054374|Fn3k|63828|fructosamine 3 kinase
mm9_v1_chr17_+_56767565_56767565	0.640084	FOXD3.p2	AK014981|4921529N20Rik|70944|RIKEN cDNA 4921529N20 gene	NM_175350|Tmem146|106757|transmembrane protein 146
mm9_v1_chr2_-_175261262_175261335	0.639592	FOXD3.p2	BC099528|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	NM_001099349|Gm14308|100043381|predicted gene 14308	NM_001100415|Gm14430|627914|predicted gene 14430	NM_001101804|Gm14434|668039|predicted gene 14434	AK010871|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK002444|0610010B08Rik|100039060|RIKEN cDNA 0610010B08 gene	AK039408|Gm4724|100043915|predicted gene 4724
mm9_v1_chr19_+_10703592_10703743	0.639178	FOXD3.p2	AK191685|Ddb1|13194|damage specific DNA binding protein 1	AK195557|Ddb1|13194|damage specific DNA binding protein 1	AK195744|Ddb1|13194|damage specific DNA binding protein 1	AK004284|Ddb1|13194|damage specific DNA binding protein 1
mm9_v1_chr12_-_32398730_32398790	0.638702	FOXD3.p2	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chr4_-_43669315_43669362	0.634777	FOXD3.p2	AK004497|Hint2|68917|histidine triad nucleotide binding protein 2	BC086940|Hint2|68917|histidine triad nucleotide binding protein 2	NM_026871|Hint2|68917|histidine triad nucleotide binding protein 2	AK170135|Hint2|68917|histidine triad nucleotide binding protein 2	AF356874|Hint2|68917|histidine triad nucleotide binding protein 2
mm9_v1_chr11_+_95353403_95353542	0.633017	FOXD3.p2	
mm9_v1_chr9_-_43921555_43921605	0.632329	FOXD3.p2	BC111036|Rnf26|213211|ring finger protein 26	AK157821|Rnf26|213211|ring finger protein 26	AK085078|Rnf26|213211|ring finger protein 26	AK033164|Rnf26|213211|ring finger protein 26
mm9_v1_chr1_+_40381420_40381534	0.63164	FOXD3.p2	AK054530|Il1rl2|107527|interleukin 1 receptor-like 2	NM_133193|Il1rl2|107527|interleukin 1 receptor-like 2	AF284433|Il1rl2|107527|interleukin 1 receptor-like 2	BC117797|Il1rl2|107527|interleukin 1 receptor-like 2	AK085780|Il1rl2|107527|interleukin 1 receptor-like 2
mm9_v1_chr2_+_83484637_83484674	0.631557	FOXD3.p2	AK005661|Zc3h15|69082|zinc finger CCCH-type containing 15	AK139511|Zc3h15|69082|zinc finger CCCH-type containing 15	AK012012|Zc3h15|69082|zinc finger CCCH-type containing 15	AK152374|Zc3h15|69082|zinc finger CCCH-type containing 15	AK167696|Zc3h15|69082|zinc finger CCCH-type containing 15	AK159596|Zc3h15|69082|zinc finger CCCH-type containing 15
mm9_v1_chr4_+_97248556_97248685	0.630507	FOXD3.p2	D90173|Nfia|18027|nuclear factor I/A	AK048696|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene	AK139357|Nfia|18027|nuclear factor I/A	NM_001122952|Nfia|18027|nuclear factor I/A	AK051361|D130039L10Rik|320488|RIKEN cDNA D130039L10 gene
mm9_v1_chr7_-_137409721_137409804	0.630069	FOXD3.p2	BC065069|Fgfr2|14183|fibroblast growth factor receptor 2	X55441|Fgfr2|14183|fibroblast growth factor receptor 2	BC072640|Fgfr2|14183|fibroblast growth factor receptor 2	M63503|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chrX_+_160600108_160600153	0.628327	FOXD3.p2	AK135357|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr15_-_36538484_36538485	0.628011	FOXD3.p2	BC011207|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr13_-_52830976_52830978	0.62782	FOXD3.p2	AK035586|BB123696|105404|expressed sequence BB123696
mm9_v1_chr2_+_34262399_34262511	0.627257	FOXD3.p2	BC043296|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr1_+_24258538_24258666	0.626065	FOXD3.p2	AK017395|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr8_+_26960094_26960127	0.625813	FOXD3.p2	NM_008432|Kcnu1|16532|potassium channel, subfamily U, member 1	AF039213|Kcnu1|16532|potassium channel, subfamily U, member 1
mm9_v1_chrX_-_45388010_45388030	0.624914	FOXD3.p2	BC020015|Apln|30878|apelin	DQ832282|Apln|30878|apelin	NM_013912|Apln|30878|apelin	AK042076|Apln|30878|apelin
mm9_v1_chr5_+_107926763_107926815	0.624073	FOXD3.p2	AK043587|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001007574|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK043720|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK164388|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK169666|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001168557|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene
mm9_v1_chr3_+_41359653_41359655	0.623573	FOXD3.p2	AK049332|Phf17|269424|PHD finger protein 17	NM_001130184|Phf17|269424|PHD finger protein 17
mm9_v1_chr10_+_128143313_128143342	0.623109	FOXD3.p2	AK012808|Pmel|20431|premelanosome protein	AK131956|Pmel|20431|premelanosome protein	NM_021882|Pmel|20431|premelanosome protein	BC075667|Pmel|20431|premelanosome protein	BC082555|Pmel|20431|premelanosome protein	U14133|Pmel|20431|premelanosome protein
mm9_v1_chr15_-_81230036_81230148	0.622804	FOXD3.p2	AK150686|St13|70356|suppression of tumorigenicity 13	AK151631|St13|70356|suppression of tumorigenicity 13	AK159149|St13|70356|suppression of tumorigenicity 13	AK013981|St13|70356|suppression of tumorigenicity 13	AK154658|St13|70356|suppression of tumorigenicity 13	AK146528|St13|70356|suppression of tumorigenicity 13	AK152270|St13|70356|suppression of tumorigenicity 13	BC003843|St13|70356|suppression of tumorigenicity 13	NM_133726|St13|70356|suppression of tumorigenicity 13	AK147169|St13|70356|suppression of tumorigenicity 13
mm9_v1_chr14_-_70607443_70607553	0.622526	FOXD3.p2	AF064806|Sorbs3|20410|sorbin and SH3 domain containing 3	NM_011366|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr7_-_52622289_52622302	0.620543	FOXD3.p2	BC058404|Ppfia3|76787|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3	EU568871|Ppfia3|76787|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm9_v1_chr8_+_96334452_96334737	0.617943	FOXD3.p2	AK160434|Gnao1|14681|guanine nucleotide binding protein, alpha O	AK035907|Gnao1|14681|guanine nucleotide binding protein, alpha O	NM_001113384|Gnao1|14681|guanine nucleotide binding protein, alpha O	NM_010308|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chrX_+_157600681_157600703	0.617681	FOXD3.p2	AK040521|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	AK031490|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	NM_133194|Scml2|107815|sex comb on midleg-like 2 (Drosophila)
mm9_v1_chr13_-_54570167_54570211	0.616928	FOXD3.p2	BC019603|Thoc3|73666|THO complex 3	AK010668|Thoc3|73666|THO complex 3	NM_028597|Thoc3|73666|THO complex 3
mm9_v1_chr11_+_75161934_75162104	0.616513	FOXD3.p2	NM_001102611|Smyd4|319822|SET and MYND domain containing 4	AK166057|Smyd4|319822|SET and MYND domain containing 4	AK089959|Smyd4|319822|SET and MYND domain containing 4	AK141484|Smyd4|319822|SET and MYND domain containing 4	BC095952|Smyd4|319822|SET and MYND domain containing 4	BC049810|Smyd4|319822|SET and MYND domain containing 4	AK030380|Smyd4|319822|SET and MYND domain containing 4	AK154507|Smyd4|319822|SET and MYND domain containing 4
mm9_v1_chr2_+_104726480_104726480	0.616478	FOXD3.p2	NM_177600|Ccdc73|211936|coiled-coil domain containing 73
mm9_v1_chr13_+_85329102_85329221	0.614128	FOXD3.p2	BC038861|Ccnh|66671|cyclin H	AK217691|Ccnh|66671|cyclin H
mm9_v1_chr4_-_95807732_95807842	0.614059	FOXD3.p2	NM_001100182|Cyp2j12-ps|242546|cytochrome P450, family 2, subfamily j, polypeptide 12, pseudogene	AK136922|Cyp2j12-ps|242546|cytochrome P450, family 2, subfamily j, polypeptide 12, pseudogene
mm9_v1_chr4_+_147965596_147965685	0.613767	FOXD3.p2	AK028359|Srm|20810|spermidine synthase	NM_009272|Srm|20810|spermidine synthase	AK051101|Srm|20810|spermidine synthase	BC005566|Srm|20810|spermidine synthase	L19311|Srm|20810|spermidine synthase	AK146395|Srm|20810|spermidine synthase
mm9_v1_chr4_-_138686896_138687027	0.612951	FOXD3.p2	AK008362|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK008449|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009189|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK011553|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK004466|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	BC055791|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK153063|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK167818|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009528|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK152509|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK159100|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK030343|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	NM_001163006|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene
mm9_v1_chr6_-_130258378_130258378	0.61224	FOXD3.p2	AF074459|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF074463|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	NM_024470|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23
mm9_v1_chr18_+_32594823_32594898	0.606237	FOXD3.p2	AK077987|Bin1|30948|bridging integrator 1
mm9_v1_chr7_-_135034440_135034483	0.605867	FOXD3.p2	AK220244|Prss53|330657|protease, serine, 53	BC147509|Prss53|330657|protease, serine, 53	BC151010|Prss53|330657|protease, serine, 53	BC151017|Prss53|330657|protease, serine, 53	BC172059|Prss53|330657|protease, serine, 53	NM_001081268|Prss53|330657|protease, serine, 53
mm9_v1_chr2_+_132079092_132079159	0.604915	FOXD3.p2	
mm9_v1_chr4_-_88238283_88238288	0.604566	FOXD3.p2	BC117775|Ifna9|15972|interferon alpha 9	BC117774|Ifna6|15969|interferon alpha 6	NM_010507|Ifna9|15972|interferon alpha 9
mm9_v1_chr14_+_79826199_79826317	0.603188	FOXD3.p2	AK135854|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	BC096019|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	NM_001024135|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7
mm9_v1_chr6_-_35258102_35258131	0.602306	FOXD3.p2	BC089161|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK036354|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	NM_172892|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK038937|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4	AK139428|Slc13a4|243755|solute carrier family 13 (sodium/sulfate symporters), member 4
mm9_v1_chr14_+_75684171_75684233	0.601968	FOXD3.p2	NM_026083|Zc3h13|67302|zinc finger CCCH type containing 13	AK013285|Zc3h13|67302|zinc finger CCCH type containing 13	AK078225|Zc3h13|67302|zinc finger CCCH type containing 13	BC138264|Zc3h13|67302|zinc finger CCCH type containing 13
mm9_v1_chr13_+_4433567_4433656	0.601216	FOXD3.p2	AK149458|Akr1c6|83702|aldo-keto reductase family 1, member C6	NM_030611|Akr1c6|83702|aldo-keto reductase family 1, member C6	BC056643|Akr1c6|83702|aldo-keto reductase family 1, member C6	D45850|Akr1c6|83702|aldo-keto reductase family 1, member C6
mm9_v1_chr1_-_173177227_173177229	0.600816	FOXD3.p2	BC016097|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr18_+_32975036_32975036	0.599946	FOXD3.p2	AF232937|Tslp|53603|thymic stromal lymphopoietin	BC130230|Tslp|53603|thymic stromal lymphopoietin	NM_021367|Tslp|53603|thymic stromal lymphopoietin
mm9_v1_chr9_-_21767872_21768019	0.599089	FOXD3.p2	BC003953|Epor|13857|erythropoietin receptor	J04843|Epor|13857|erythropoietin receptor	AK139031|Epor|13857|erythropoietin receptor	BC046282|Epor|13857|erythropoietin receptor	NM_010149|Epor|13857|erythropoietin receptor
mm9_v1_chr8_+_125626249_125626348	0.598358	FOXD3.p2	NM_016738|Rpl13|270106|ribosomal protein L13	AK003487|Rpl13|270106|ribosomal protein L13	AK010989|Rpl13|270106|ribosomal protein L13	AK002787|Rpl13|270106|ribosomal protein L13	U28917|Rpl13|270106|ribosomal protein L13	BC085493|Rpl13|270106|ribosomal protein L13	BC034449|Rpl13|270106|ribosomal protein L13	BC055358|Rpl13|270106|ribosomal protein L13
mm9_v1_chr9_-_61762220_61762398	0.598335	FOXD3.p2	BC013252|Rplp1|56040|ribosomal protein, large, P1	BC092536|Rplp1|56040|ribosomal protein, large, P1	NM_018853|Rplp1|56040|ribosomal protein, large, P1	BC092088|Rplp1|56040|ribosomal protein, large, P1	BC091747|Rplp1|56040|ribosomal protein, large, P1	BC058685|Rplp1|56040|ribosomal protein, large, P1	U29402|Rplp1|56040|ribosomal protein, large, P1	AK007832|Rplp1|56040|ribosomal protein, large, P1	AK088070|Rplp1|56040|ribosomal protein, large, P1	AK169347|Rplp1|56040|ribosomal protein, large, P1	AK010656|Rplp1|56040|ribosomal protein, large, P1
mm9_v1_chr9_+_47338255_47338425	0.598222	FOXD3.p2	BC090970|Cadm1|54725|cell adhesion molecule 1	AF434663|Cadm1|54725|cell adhesion molecule 1	AK013911|Cadm1|54725|cell adhesion molecule 1
mm9_v1_chr9_-_103965323_103965336	0.597705	FOXD3.p2	BC019764|Uba5|66663|ubiquitin-like modifier activating enzyme 5
mm9_v1_chr10_+_77315603_77315603	0.597042	FOXD3.p2	NM_001162944|Gm10318|622629|predicted gene 10318
mm9_v1_chr2_-_75819804_75820023	0.593887	FOXD3.p2	BC004773|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK045096|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK029535|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK019670|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	NM_030188|Ttc30a1|78802|tetratricopeptide repeat domain 30A1
mm9_v1_chr13_-_52830967_52830973	0.593517	FOXD3.p2	AK035379|BB123696|105404|expressed sequence BB123696	AK035711|BB123696|105404|expressed sequence BB123696	AK035638|BB123696|105404|expressed sequence BB123696
mm9_v1_chr11_-_72016872_72016872	0.593505	FOXD3.p2	BC043106|4933427D14Rik|74477|RIKEN cDNA 4933427D14 gene	NM_028963|4933427D14Rik|74477|RIKEN cDNA 4933427D14 gene
mm9_v1_chr7_-_129164546_129164728	0.593371	FOXD3.p2	AK187372|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK129280|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	BC062933|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK004632|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK154904|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK143691|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK159953|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	AK149798|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2	NM_028758|Gga2|74105|golgi associated, gamma adaptin ear containing, ARF binding protein 2
mm9_v1_chr17_-_65890082_65890121	0.592569	FOXD3.p2	BC150885|Tmem232|381107|transmembrane protein 232	BC172032|Tmem232|381107|transmembrane protein 232	AF338469|Tmem232|381107|transmembrane protein 232	NM_001008973|Tmem232|381107|transmembrane protein 232
mm9_v1_chr16_+_49699314_49699432	0.592313	FOXD3.p2	DQ266091|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AF274590|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK047217|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	NM_028680|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	AK014731|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138143|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)	BC138144|Ift57|73916|intraflagellar transport 57 homolog (Chlamydomonas)
mm9_v1_chrX_+_146981959_146981987	0.590499	FOXD3.p2	NM_001102446|Alas2|11656|aminolevulinic acid synthase 2, erythroid	NM_009653|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK077610|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr2_-_147011990_147012137	0.590097	FOXD3.p2	AK043561|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138159|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138160|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	U31566|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	AK141002|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_001077632|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_010919|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr15_+_44027680_44027795	0.588546	FOXD3.p2	AK134591|Trhr|22045|thyrotropin releasing hormone receptor	NM_013696|Trhr|22045|thyrotropin releasing hormone receptor	M59811|Trhr|22045|thyrotropin releasing hormone receptor	M94384|Trhr|22045|thyrotropin releasing hormone receptor	BC109005|Trhr|22045|thyrotropin releasing hormone receptor	BC109006|Trhr|22045|thyrotropin releasing hormone receptor	BC128269|Trhr|22045|thyrotropin releasing hormone receptor
mm9_v1_chr3_-_102586596_102586636	0.587184	FOXD3.p2	M35719|Tshb|22094|thyroid stimulating hormone, beta subunit	M35720|Tshb|22094|thyroid stimulating hormone, beta subunit	M35721|Tshb|22094|thyroid stimulating hormone, beta subunit	M35723|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165939|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165940|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_009432|Tshb|22094|thyroid stimulating hormone, beta subunit
mm9_v1_chr12_-_82633781_82633909	0.58703	FOXD3.p2	AY138960|Synj2bp|24071|synaptojanin 2 binding protein	BC027433|Synj2bp|24071|synaptojanin 2 binding protein	AK013474|Synj2bp|24071|synaptojanin 2 binding protein	AK163362|Synj2bp|24071|synaptojanin 2 binding protein	AK008254|Synj2bp|24071|synaptojanin 2 binding protein	AY566156|Synj2bp|24071|synaptojanin 2 binding protein	AK008054|Synj2bp|24071|synaptojanin 2 binding protein	AK078422|Synj2bp|24071|synaptojanin 2 binding protein	AK030379|Synj2bp|24071|synaptojanin 2 binding protein	AK033514|Synj2bp|24071|synaptojanin 2 binding protein	NM_025292|Synj2bp|24071|synaptojanin 2 binding protein
mm9_v1_chr4_-_4065927_4065977	0.584683	FOXD3.p2	AK047709|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	AK161272|Penk|18619|preproenkephalin	AK135111|Penk|18619|preproenkephalin
mm9_v1_chr7_+_133415982_133416132	0.584424	FOXD3.p2	BC031759|Sbk1|104175|SH3-binding kinase 1	NM_145587|Sbk1|104175|SH3-binding kinase 1
mm9_v1_chr8_+_84239098_84239098	0.583781	FOXD3.p2	BC064813|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II	NM_001024617|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II
mm9_v1_chr16_-_94591826_94592078	0.583251	FOXD3.p2	AF216308|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC061117|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159619|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159620|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216307|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr10_+_81274930_81274930	0.583243	FOXD3.p2	BC057364|Gm10778|100233208|predicted gene 10778	NM_001142963|Gm10778|100233208|predicted gene 10778
mm9_v1_chr10_-_22451738_22451780	0.581686	FOXD3.p2	AK005604|Tbpl1|237336|TATA box binding protein-like 1
mm9_v1_chr17_-_34875879_34875932	0.578824	FOXD3.p2	X05314|C4b|12268|complement component 4B (Childo blood group)
mm9_v1_chr8_-_18741455_18741532	0.577601	FOXD3.p2	BC138309|Angpt2|11601|angiopoietin 2	BC138313|Angpt2|11601|angiopoietin 2	AF004326|Angpt2|11601|angiopoietin 2	BC027216|Angpt2|11601|angiopoietin 2	AK048622|Angpt2|11601|angiopoietin 2	AK156132|Angpt2|11601|angiopoietin 2
mm9_v1_chr5_+_148241736_148241750	0.577028	FOXD3.p2	AK153632|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr4_-_142889312_142889356	0.576934	FOXD3.p2	M73748|Pdpn|14726|podoplanin	BC026551|Pdpn|14726|podoplanin
mm9_v1_chr8_-_13890244_13890296	0.576596	FOXD3.p2	BC029192|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK010573|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK008882|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	NM_025556|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene
mm9_v1_chr3_+_136333083_136333098	0.576333	FOXD3.p2	AK146387|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr15_-_97738692_97738754	0.575645	FOXD3.p2	BC006716|Vdr|22337|vitamin D receptor	D31969|Vdr|22337|vitamin D receptor	AK154647|Vdr|22337|vitamin D receptor	AK030339|Vdr|22337|vitamin D receptor	NM_009504|Vdr|22337|vitamin D receptor	AK156789|Vdr|22337|vitamin D receptor
mm9_v1_chr8_+_14881571_14881635	0.572958	FOXD3.p2	
mm9_v1_chr4_+_42248495_42248522	0.571394	FOXD3.p2	AK144337|Ccl19|24047|chemokine (C-C motif) ligand 19	AF059208|Ccl19|24047|chemokine (C-C motif) ligand 19	NM_011888|Ccl19|24047|chemokine (C-C motif) ligand 19	BC051472|Ccl19|24047|chemokine (C-C motif) ligand 19
mm9_v1_chr19_-_44103644_44103736	0.569538	FOXD3.p2	BC024068|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC034834|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC022141|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC025819|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC026766|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK050436|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK149451|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001001446|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001167905|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44
mm9_v1_chr11_-_102417457_102417523	0.567818	FOXD3.p2	AK135410|Gpatch8|237943|G patch domain containing 8	NM_001159492|Gpatch8|237943|G patch domain containing 8
mm9_v1_chr18_-_80443840_80443840	0.567524	FOXD3.p2	AK141935|Hsbp1l1|66255|heat shock factor binding protein 1-like 1	NM_001136181|Hsbp1l1|66255|heat shock factor binding protein 1-like 1
mm9_v1_chr14_-_69273768_69273898	0.566873	FOXD3.p2	BC058782|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF153350|Adam28|13522|a disintegrin and metallopeptidase domain 28	AK052479|Adam28|13522|a disintegrin and metallopeptidase domain 28	AK036800|Adam28|13522|a disintegrin and metallopeptidase domain 28	AK081736|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163293|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163290|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163291|Adam28|13522|a disintegrin and metallopeptidase domain 28	AF163292|Adam28|13522|a disintegrin and metallopeptidase domain 28	NM_001048175|Adam28|13522|a disintegrin and metallopeptidase domain 28	NM_010082|Adam28|13522|a disintegrin and metallopeptidase domain 28	NM_183366|Adam28|13522|a disintegrin and metallopeptidase domain 28
mm9_v1_chr14_-_25306261_25306271	0.566814	FOXD3.p2	NM_001081247|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK170475|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chr4_-_60152702_60152728	0.566747	FOXD3.p2	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2
mm9_v1_chr16_+_20535519_20535657	0.566147	FOXD3.p2	AK146517|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK168414|Ap2m1|11773|adaptor protein complex AP-2, mu1	NM_009679|Ap2m1|11773|adaptor protein complex AP-2, mu1	U27106|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK159534|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC056352|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK150358|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC089342|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC094510|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK143586|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK141862|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK172889|Ap2m1|11773|adaptor protein complex AP-2, mu1
mm9_v1_chr1_-_74982118_74982188	0.565601	FOXD3.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr7_-_13583329_13583480	0.565074	FOXD3.p2	AF072760|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC115421|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145823|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145825|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr17_-_24484196_24484196	0.564898	FOXD3.p2	AB112584|Abca17|381072|ATP-binding cassette, sub-family A (ABC1), member 17	NM_001031621|Abca17|381072|ATP-binding cassette, sub-family A (ABC1), member 17
mm9_v1_chr16_+_30599808_30599823	0.564287	FOXD3.p2	AK083036|Fam43a|224093|family with sequence similarity 43, member A	NM_177632|Fam43a|224093|family with sequence similarity 43, member A	AK137950|Fam43a|224093|family with sequence similarity 43, member A	BC099947|Fam43a|224093|family with sequence similarity 43, member A
mm9_v1_chr19_+_41986360_41986656	0.564173	FOXD3.p2	NM_023418|Pgam1|18648|phosphoglycerate mutase 1	BC002241|Pgam1|18648|phosphoglycerate mutase 1	BC106139|Pgam1|18648|phosphoglycerate mutase 1	BC005661|Pgam1|18648|phosphoglycerate mutase 1	AF283667|Pgam1|18648|phosphoglycerate mutase 1	AK004921|Pgam1|18648|phosphoglycerate mutase 1	AK009905|Pgam1|18648|phosphoglycerate mutase 1	AK144681|Pgam1|18648|phosphoglycerate mutase 1	AK153202|Pgam1|18648|phosphoglycerate mutase 1	AK159305|Pgam1|18648|phosphoglycerate mutase 1	AK150716|Pgam1|18648|phosphoglycerate mutase 1	AK152443|Pgam1|18648|phosphoglycerate mutase 1	AK165410|Pgam1|18648|phosphoglycerate mutase 1	AK168949|Pgam1|18648|phosphoglycerate mutase 1	BC083090|Pgam1|18648|phosphoglycerate mutase 1	BC066844|Pgam1|18648|phosphoglycerate mutase 1
mm9_v1_chr7_-_106632113_106632218	0.563744	FOXD3.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr6_-_129401762_129402017	0.561248	FOXD3.p2	AK049608|Clec1a|243653|C-type lectin domain family 1, member a	AK031121|Clec1a|243653|C-type lectin domain family 1, member a	BC052840|Clec1a|243653|C-type lectin domain family 1, member a	AK036846|Clec1a|243653|C-type lectin domain family 1, member a	AK165920|Clec1a|243653|C-type lectin domain family 1, member a	NM_175526|Clec1a|243653|C-type lectin domain family 1, member a
mm9_v1_chr4_+_28740314_28740475	0.561118	FOXD3.p2	AK030480|Epha7|13841|Eph receptor A7	AK049848|Epha7|13841|Eph receptor A7	BC026153|Epha7|13841|Eph receptor A7	AK032973|Epha7|13841|Eph receptor A7
mm9_v1_chr6_-_115685120_115685120	0.56111	FOXD3.p2	NM_001168258|Tmem40|94346|transmembrane protein 40
mm9_v1_chrX_+_90920450_90920749	0.561098	FOXD3.p2	NM_211138|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	BC048917|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AY189949|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform	AK032027|Pcyt1b|236899|phosphate cytidylyltransferase 1, choline, beta isoform
mm9_v1_chr12_-_105094033_105094183	0.56069	FOXD3.p2	M12586|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr11_+_6375032_6375069	0.560113	FOXD3.p2	
mm9_v1_chr18_+_65210574_65210693	0.559358	FOXD3.p2	BC082281|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr3_-_92655207_92655209	0.557615	FOXD3.p2	AK003585|Lce1l|73730|late cornified envelope 1L	NM_028628|Lce1l|73730|late cornified envelope 1L
mm9_v1_chr8_-_90483124_90483239	0.557331	FOXD3.p2	BC079586|Zfp423|94187|zinc finger protein 423	BC139028|Zfp423|94187|zinc finger protein 423	BC139030|Zfp423|94187|zinc finger protein 423
mm9_v1_chr7_-_13583494_13583549	0.557174	FOXD3.p2	BC013272|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC013335|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AJ223959|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AK144301|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	NM_009512|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr3_-_90318178_90318313	0.556555	FOXD3.p2	AK017279|S100a1|20193|S100 calcium binding protein A1	AK168822|S100a1|20193|S100 calcium binding protein A1	AK002721|S100a1|20193|S100 calcium binding protein A1	AF087687|S100a1|20193|S100 calcium binding protein A1	AK012578|S100a1|20193|S100 calcium binding protein A1	NM_011309|S100a1|20193|S100 calcium binding protein A1	BC005590|S100a1|20193|S100 calcium binding protein A1
mm9_v1_chr11_-_50745128_50745136	0.556163	FOXD3.p2	AK148756|Zfp354b|27274|zinc finger protein 354B	NM_013744|Zfp354b|27274|zinc finger protein 354B
mm9_v1_chr15_+_39577477_39577489	0.555855	FOXD3.p2	AB109560|Tm7sf4|75766|transmembrane 7 superfamily member 4	AB109561|Tm7sf4|75766|transmembrane 7 superfamily member 4	AK014697|Tm7sf4|75766|transmembrane 7 superfamily member 4	AK154384|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517483|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517484|Tm7sf4|75766|transmembrane 7 superfamily member 4	AY517485|Tm7sf4|75766|transmembrane 7 superfamily member 4	NM_029422|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC139146|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC145557|Tm7sf4|75766|transmembrane 7 superfamily member 4	BC145558|Tm7sf4|75766|transmembrane 7 superfamily member 4
mm9_v1_chr2_+_90858663_90858815	0.555222	FOXD3.p2	AK080832|Celf1|13046|CUGBP, Elav-like family member 1	AK160135|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr1_-_65225583_65225732	0.555155	FOXD3.p2	AK087063|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK151212|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK149019|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK159173|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK160896|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167583|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167158|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK168832|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	BC088986|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	NM_010497|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble
mm9_v1_chr2_-_150835067_150835133	0.555121	FOXD3.p2	AK129253|Ninl|78177|ninein-like	BC067071|Ninl|78177|ninein-like	NM_207204|Ninl|78177|ninein-like
mm9_v1_chr7_-_132634942_132634979	0.554868	FOXD3.p2	AK009715|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK166410|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK160217|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK011011|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr2_-_152657392_152657404	0.552892	FOXD3.p2	AK150028|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr4_-_150026205_150026286	0.552318	FOXD3.p2	AK134677|Slc45a1|242773|solute carrier family 45, member 1	BC051188|Slc45a1|242773|solute carrier family 45, member 1	AK134683|Slc45a1|242773|solute carrier family 45, member 1	AK158002|Slc45a1|242773|solute carrier family 45, member 1	AK082651|Slc45a1|242773|solute carrier family 45, member 1	NM_173774|Slc45a1|242773|solute carrier family 45, member 1
mm9_v1_chr3_-_105762117_105762217	0.551256	FOXD3.p2	AK169634|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC089574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK162311|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK149176|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167626|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168590|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK081249|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK002960|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC049640|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK011312|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168028|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168041|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK019459|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK037892|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152253|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152829|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167480|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK169137|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK150730|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151250|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK158569|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK157544|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr19_+_29038321_29038434	0.550626	FOXD3.p2	AK016572|Ppapdc2|74411|phosphatidic acid phosphatase type 2 domain containing 2	NM_028922|Ppapdc2|74411|phosphatidic acid phosphatase type 2 domain containing 2	AK041581|Ppapdc2|74411|phosphatidic acid phosphatase type 2 domain containing 2
mm9_v1_chr16_-_22841914_22841951	0.548904	FOXD3.p2	AK179171|Tbccd1|70573|TBCC domain containing 1
mm9_v1_chr8_-_46347363_46347377	0.548736	FOXD3.p2	BC019485|F11|109821|coagulation factor XI	AF356627|F11|109821|coagulation factor XI
mm9_v1_chr17_-_28536455_28536544	0.547754	FOXD3.p2	AK199818|Fkbp5|14229|FK506 binding protein 5
mm9_v1_chr3_+_67234003_67234103	0.547472	FOXD3.p2	NM_138591|Gfm1|28030|G elongation factor, mitochondrial 1	AK033214|Gfm1|28030|G elongation factor, mitochondrial 1	BC013093|Gfm1|28030|G elongation factor, mitochondrial 1	BC031772|Gfm1|28030|G elongation factor, mitochondrial 1	AF315511|Gfm1|28030|G elongation factor, mitochondrial 1
mm9_v1_chr16_-_30267577_30267656	0.547467	FOXD3.p2	BC025836|Cpn2|71756|carboxypeptidase N, polypeptide 2	AK005049|Cpn2|71756|carboxypeptidase N, polypeptide 2	NM_027904|Cpn2|71756|carboxypeptidase N, polypeptide 2
mm9_v1_chr17_+_35195979_35196038	0.547466	FOXD3.p2	NM_001190449|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2	NM_016765|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2	BC003328|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2	BC115555|Ddah2|51793|dimethylarginine dimethylaminohydrolase 2
mm9_v1_chr4_-_106979732_106979773	0.546208	FOXD3.p2	AK002549|Dio1|13370|deiodinase, iodothyronine, type I	BC089608|Dio1|13370|deiodinase, iodothyronine, type I	NM_007860|Dio1|13370|deiodinase, iodothyronine, type I	U49861|Dio1|13370|deiodinase, iodothyronine, type I	BC019786|Dio1|13370|deiodinase, iodothyronine, type I	BC037080|Dio1|13370|deiodinase, iodothyronine, type I
mm9_v1_chr3_+_137530638_137530776	0.542634	FOXD3.p2	NM_001033155|Dnajb14|70604|DnaJ (Hsp40) homolog, subfamily B, member 14	AK017735|Dnajb14|70604|DnaJ (Hsp40) homolog, subfamily B, member 14
mm9_v1_chr7_-_21288567_21288567	0.542363	FOXD3.p2	NM_001167154|Gm8693|667543|predicted gene 8693	NM_001167155|Gm4144|100042980|predicted gene 4144
mm9_v1_chr6_+_147039596_147039596	0.542333	FOXD3.p2	NM_001081237|Klhdc5|232539|kelch domain containing 5
mm9_v1_chr3_-_7613335_7613426	0.539818	FOXD3.p2	BC110553|Il7|16196|interleukin 7	AK041307|Il7|16196|interleukin 7	NM_008371|Il7|16196|interleukin 7
mm9_v1_chr1_-_38954763_38954854	0.539356	FOXD3.p2	AF360543|Chst10|98388|carbohydrate sulfotransferase 10	AK046415|Chst10|98388|carbohydrate sulfotransferase 10	AK171758|Chst10|98388|carbohydrate sulfotransferase 10
mm9_v1_chr15_-_103045710_103045798	0.537584	FOXD3.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr10_-_8238569_8238650	0.537513	FOXD3.p2	AK086181|Ust|338362|uronyl-2-sulfotransferase	AK147850|Ust|338362|uronyl-2-sulfotransferase	NM_177387|Ust|338362|uronyl-2-sulfotransferase
mm9_v1_chr11_+_120094240_120094260	0.536144	FOXD3.p2	AK147250|Bahcc1|268515|BAH domain and coiled-coil containing 1	NM_198423|Bahcc1|268515|BAH domain and coiled-coil containing 1
mm9_v1_chr17_-_53985142_53985282	0.536118	FOXD3.p2	AK007384|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	AK144336|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	BC022665|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	AY005469|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2	NM_026935|Sult1c2|69083|sulfotransferase family, cytosolic, 1C, member 2
mm9_v1_chr11_-_69485842_69485924	0.536078	FOXD3.p2	NM_001159375|Eif4a1|13681|eukaryotic translation initiation factor 4A1	NM_144958|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr5_-_104450785_104450834	0.535849	FOXD3.p2	AF304306|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	BC038340|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	NM_053262|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK154803|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155174|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK158327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK170939|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AY053570|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155202|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11	AK155327|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr13_+_44826638_44826639	0.535117	FOXD3.p2	AK147226|Jarid2|16468|jumonji, AT rich interactive domain 2
mm9_v1_chr7_+_148592433_148592442	0.534998	FOXD3.p2	NM_001101644|Gm4535|100043585|predicted gene 4535
mm9_v1_chr13_-_29045399_29045574	0.533545	FOXD3.p2	AK187111|Sox4|20677|SRY-box containing gene 4	BC060669|Sox4|20677|SRY-box containing gene 4	X70298|Sox4|20677|SRY-box containing gene 4	BC052736|Sox4|20677|SRY-box containing gene 4	NM_009238|Sox4|20677|SRY-box containing gene 4	AK053840|Sox4|20677|SRY-box containing gene 4	AK028989|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr15_-_97536251_97536289	0.532877	FOXD3.p2	AK009765|Rpap3|71919|RNA polymerase II associated protein 3	NM_028003|Rpap3|71919|RNA polymerase II associated protein 3	BC004046|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr6_-_84543739_84543901	0.532456	FOXD3.p2	AY134662|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1	NM_175475|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1	BC059246|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1	NM_001177713|Cyp26b1|232174|cytochrome P450, family 26, subfamily b, polypeptide 1
mm9_v1_chrX_-_34442878_34442893	0.532441	FOXD3.p2	AK042690|Nkrf|77286|NF-kappaB repressing factor	NM_029891|Nkrf|77286|NF-kappaB repressing factor
mm9_v1_chr17_+_28829512_28829512	0.531535	FOXD3.p2	AK151348|Mapk14|26416|mitogen-activated protein kinase 14	AK153025|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168513|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr19_-_9162377_9162448	0.530736	FOXD3.p2	BC027518|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	AK145844|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	NM_011681|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)
mm9_v1_chr17_+_23737822_23737907	0.529986	FOXD3.p2	AK141259|Zscan10|332221|zinc finger and SCAN domain containing 10	NM_001033425|Zscan10|332221|zinc finger and SCAN domain containing 10	DQ323929|Zscan10|332221|zinc finger and SCAN domain containing 10	DQ323930|Zscan10|332221|zinc finger and SCAN domain containing 10	DQ323931|Zscan10|332221|zinc finger and SCAN domain containing 10	EF152499|Zscan10|332221|zinc finger and SCAN domain containing 10	EF152500|Zscan10|332221|zinc finger and SCAN domain containing 10	BC068284|Zscan10|332221|zinc finger and SCAN domain containing 10
mm9_v1_chr19_+_43856793_43856893	0.529218	FOXD3.p2	NM_013806|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF227274|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282772|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282773|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm9_v1_chr7_+_52872975_52872999	0.528811	FOXD3.p2	AK137638|Fut1|14343|fucosyltransferase 1	NM_008051|Fut1|14343|fucosyltransferase 1	BC109145|Fut1|14343|fucosyltransferase 1	BC109146|Fut1|14343|fucosyltransferase 1
mm9_v1_chr11_-_69735459_69735459	0.526908	FOXD3.p2	AY129323|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166593|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr6_+_55027608_55027621	0.525804	FOXD3.p2	AK191772|Gars|353172|glycyl-tRNA synthetase
mm9_v1_chr7_-_134160841_134160854	0.525652	FOXD3.p2	AK013840|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr16_+_92292580_92292633	0.525336	FOXD3.p2	AK008619|Kcne2|246133|potassium voltage-gated channel, Isk-related subfamily, gene 2	NM_134110|Kcne2|246133|potassium voltage-gated channel, Isk-related subfamily, gene 2
mm9_v1_chr12_-_11272479_11272602	0.525282	FOXD3.p2	BC138157|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC138158|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK031077|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC099936|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	BC090653|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	NM_177331|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK030995|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)	AK158255|Gen1|209334|Gen homolog 1, endonuclease (Drosophila)
mm9_v1_chr12_+_79962998_79963115	0.525026	FOXD3.p2	BC016448|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	BC016497|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	AK143499|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	NM_026114|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	AK167763|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha	BC005463|Eif2s1|13665|eukaryotic translation initiation factor 2, subunit 1 alpha
mm9_v1_chrX_+_66015013_66015108	0.524681	FOXD3.p2	BC099411|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166619|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166620|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_174993|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC138087|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145139|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145140|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171922|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171923|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171947|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171948|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AK076190|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AY214130|Fmr1nb|207854|fragile X mental retardation 1 neighbor
mm9_v1_chr2_+_150735306_150735352	0.522265	FOXD3.p2	NM_001163476|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	NM_027014|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	AK013116|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)	BC027537|Gins1|69270|GINS complex subunit 1 (Psf1 homolog)
mm9_v1_chr5_+_34974750_34974884	0.522229	FOXD3.p2	
mm9_v1_chr5_-_87997908_87998005	0.521802	FOXD3.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr10_+_61155005_61155061	0.521463	FOXD3.p2	AK005495|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr12_+_45412878_45412942	0.521075	FOXD3.p2	AK033938|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr17_-_26232411_26232456	0.519771	FOXD3.p2	AF153451|Nme4|56520|non-metastatic cells 4, protein expressed in	NM_019731|Nme4|56520|non-metastatic cells 4, protein expressed in	AK011573|Nme4|56520|non-metastatic cells 4, protein expressed in	AK017724|Nme4|56520|non-metastatic cells 4, protein expressed in	AF288690|Nme4|56520|non-metastatic cells 4, protein expressed in	BC027277|Nme4|56520|non-metastatic cells 4, protein expressed in	AK012805|Nme4|56520|non-metastatic cells 4, protein expressed in
mm9_v1_chr8_+_125589411_125589473	0.519063	FOXD3.p2	BC051051|Spg7|234847|spastic paraplegia 7 homolog (human)
mm9_v1_chr3_-_87862384_87862439	0.517026	FOXD3.p2	BC058362|Apoa1bp|246703|apolipoprotein A-I binding protein	AJ344092|Apoa1bp|246703|apolipoprotein A-I binding protein	AY566271|Apoa1bp|246703|apolipoprotein A-I binding protein	NM_144897|Apoa1bp|246703|apolipoprotein A-I binding protein	AK159846|Apoa1bp|246703|apolipoprotein A-I binding protein
mm9_v1_chr2_+_34262372_34262384	0.516788	FOXD3.p2	AK042154|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	AK148428|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr2_-_127618207_127618237	0.516373	FOXD3.p2	AK165423|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC048556|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK008527|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK027942|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC116797|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	BC116799|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene	AK005218|1500011K16Rik|67885|RIKEN cDNA 1500011K16 gene
mm9_v1_chr6_-_134837738_134837876	0.514258	FOXD3.p2	U46923|Gpr19|14760|G protein-coupled receptor 19	BC050187|Gpr19|14760|G protein-coupled receptor 19	NM_001167697|Gpr19|14760|G protein-coupled receptor 19	NM_001167699|Gpr19|14760|G protein-coupled receptor 19	NM_008157|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr14_+_73992436_73992469	0.513806	FOXD3.p2	AK003867|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit
mm9_v1_chrX_-_160396490_160396625	0.513542	FOXD3.p2	BC083160|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC099617|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	BC065693|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	D45205|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK030296|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	AK045504|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_009453|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2	NM_178794|Zrsr2|22184|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
mm9_v1_chr18_+_38409902_38409977	0.513318	FOXD3.p2	NM_024179|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK035876|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK002437|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK171837|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK079423|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	BC002117|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK141675|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene	AK172900|0610009O20Rik|66839|RIKEN cDNA 0610009O20 gene
mm9_v1_chr4_-_60736086_60736197	0.511962	FOXD3.p2	AJ309921|Mup10|100039008|major urinary protein 10	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	M16355|Mup1|17840|major urinary protein 1
mm9_v1_chr4_+_52609145_52609145	0.511316	FOXD3.p2	AK019748|4930547C10Rik|68274|RIKEN cDNA 4930547C10 gene	NM_026652|4930547C10Rik|68274|RIKEN cDNA 4930547C10 gene
mm9_v1_chr4_-_34634507_34634712	0.510189	FOXD3.p2	Z71268|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	BC012252|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	AK144170|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	NM_011895|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm9_v1_chr2_-_34681707_34681829	0.509962	FOXD3.p2	AK033129|Fbxw2|30050|F-box and WD-40 domain protein 2	AK004015|Fbxw2|30050|F-box and WD-40 domain protein 2	AK005103|Fbxw2|30050|F-box and WD-40 domain protein 2	AK040764|Fbxw2|30050|F-box and WD-40 domain protein 2	AK145405|Fbxw2|30050|F-box and WD-40 domain protein 2	AK133758|Fbxw2|30050|F-box and WD-40 domain protein 2	AK045743|Fbxw2|30050|F-box and WD-40 domain protein 2	AK014858|Fbxw2|30050|F-box and WD-40 domain protein 2	AK184904|Fbxw2|30050|F-box and WD-40 domain protein 2	AK078815|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164769|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164770|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_001164772|Fbxw2|30050|F-box and WD-40 domain protein 2	NM_013890|Fbxw2|30050|F-box and WD-40 domain protein 2	BC003834|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr7_-_22813915_22813915	0.509314	FOXD3.p2	NM_001166746|Vmn1r111|667292|vomeronasal 1 receptor 111	NM_001166839|Gm4172|100043016|predicted gene 4172	NM_001167168|Gm4220|100043088|predicted gene 4220	NM_001167169|Gm4179|100043029|predicted gene 4179
mm9_v1_chr15_+_79178063_79178107	0.507834	FOXD3.p2	BC022952|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)	NM_010755|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr11_-_69575192_69575469	0.506637	FOXD3.p2	AF016712|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137893|Amac1|56293|acyl-malonyl condensing enzyme 1	BC137894|Amac1|56293|acyl-malonyl condensing enzyme 1	NM_019871|Amac1|56293|acyl-malonyl condensing enzyme 1	AK077181|Amac1|56293|acyl-malonyl condensing enzyme 1
mm9_v1_chr4_+_48552806_48552952	0.505554	FOXD3.p2	AK075956|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145925|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK017795|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	AK011381|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene	NM_001145924|5730528L13Rik|66665|RIKEN cDNA 5730528L13 gene
mm9_v1_chr11_+_53270706_53270763	0.505032	FOXD3.p2	NM_027917|Shroom1|71774|shroom family member 1	BC005761|Shroom1|71774|shroom family member 1	AK035462|Shroom1|71774|shroom family member 1	AK085693|Shroom1|71774|shroom family member 1
mm9_v1_chrX_+_146981989_146982012	0.504018	FOXD3.p2	AK002642|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165262|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M63244|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165257|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK172094|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M15268|Alas2|11656|aminolevulinic acid synthase 2, erythroid	BC150870|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chrX_-_109812258_109812267	0.502431	FOXD3.p2	AK036922|Pof1b|69693|premature ovarian failure 1B	AK086511|Pof1b|69693|premature ovarian failure 1B	AK137653|Pof1b|69693|premature ovarian failure 1B	NM_181579|Pof1b|69693|premature ovarian failure 1B
mm9_v1_chr2_-_112208115_112208198	0.502178	FOXD3.p2	AK167745|Tmem85|68032|transmembrane protein 85	BC051926|Tmem85|68032|transmembrane protein 85	AK003668|Tmem85|68032|transmembrane protein 85	AK012047|Tmem85|68032|transmembrane protein 85	AK078165|Tmem85|68032|transmembrane protein 85	NM_026519|Tmem85|68032|transmembrane protein 85
mm9_v1_chr17_-_25933867_25933930	0.502053	FOXD3.p2	BC008695|Metrn|70083|meteorin, glial cell differentiation regulator	BC037181|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133462|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133463|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133464|Metrn|70083|meteorin, glial cell differentiation regulator	AK007688|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chrX_+_106029816_106029906	0.501701	FOXD3.p2	AK086455|2810403D21Rik|69964|RIKEN cDNA 2810403D21 gene
mm9_v1_chr3_-_92289795_92289819	0.501286	FOXD3.p2	X91824|Sprr1a|20753|small proline-rich protein 1A	BC027534|Sprr1a|20753|small proline-rich protein 1A	NM_009264|Sprr1a|20753|small proline-rich protein 1A	AK144782|Sprr1a|20753|small proline-rich protein 1A
mm9_v1_chr5_-_124699740_124699768	0.500954	FOXD3.p2	BC082303|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2
mm9_v1_chrX_+_104115963_104116162	0.500604	FOXD3.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr7_+_11591093_11591093	0.500224	FOXD3.p2	BC050218|Zscan4c|245109|zinc finger and SCAN domain containing 4C	NM_001013765|Zscan4c|245109|zinc finger and SCAN domain containing 4C
mm9_v1_chr15_-_89026839_89026926	0.499613	FOXD3.p2	BC030395|Fam116b|69440|family with sequence similarity 116, member B	BC139003|Fam116b|69440|family with sequence similarity 116, member B	AK084555|Fam116b|69440|family with sequence similarity 116, member B	NM_027081|Fam116b|69440|family with sequence similarity 116, member B	AK154949|Fam116b|69440|family with sequence similarity 116, member B
mm9_v1_chr10_+_8604373_8604391	0.497744	FOXD3.p2	AK010852|Sash1|70097|SAM and SH3 domain containing 1
mm9_v1_chr19_+_56798916_56798947	0.496659	FOXD3.p2	AK039569|Adrb1|11554|adrenergic receptor, beta 1
mm9_v1_chr3_-_107877121_107877254	0.496361	FOXD3.p2	AK196006|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr19_+_45122281_45122364	0.493956	FOXD3.p2	AK154274|Sfxn3|94280|sideroflexin 3	AF325262|Sfxn3|94280|sideroflexin 3	AK089985|Sfxn3|94280|sideroflexin 3	AK184595|Sfxn3|94280|sideroflexin 3	AK206211|Sfxn3|94280|sideroflexin 3	AK034514|Sfxn3|94280|sideroflexin 3
mm9_v1_chr2_-_6110280_6110381	0.493731	FOXD3.p2	AK209830|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3
mm9_v1_chr15_+_102864825_102864872	0.493331	FOXD3.p2	NM_013553|Hoxc4|15423|homeobox C4	X69019|Hoxc4|15423|homeobox C4	BC144778|Hoxc4|15423|homeobox C4	BC150664|Hoxc4|15423|homeobox C4
mm9_v1_chr11_-_69480763_69480942	0.491309	FOXD3.p2	
mm9_v1_chr10_+_3366075_3366075	0.491003	FOXD3.p2	AK157384|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170800|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170801|Ipcef1|320495|interaction protein for cytohesin exchange factors 1	NM_001170802|Ipcef1|320495|interaction protein for cytohesin exchange factors 1
mm9_v1_chr14_-_69151731_69151797	0.490113	FOXD3.p2	AF013107|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK136692|Adam7|11500|a disintegrin and metallopeptidase domain 7	NM_007402|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK020312|Adam7|11500|a disintegrin and metallopeptidase domain 7
mm9_v1_chr15_-_68090408_68090465	0.489754	FOXD3.p2	BC053930|Zfat|380993|zinc finger and AT hook domain containing	NM_001145888|Zfat|380993|zinc finger and AT hook domain containing	NM_198644|Zfat|380993|zinc finger and AT hook domain containing
mm9_v1_chr9_+_44142772_44142803	0.489747	FOXD3.p2	AK088040|H2afx|15270|H2A histone family, member X	AK008124|H2afx|15270|H2A histone family, member X	X58069|H2afx|15270|H2A histone family, member X	BC010336|H2afx|15270|H2A histone family, member X	NM_010436|H2afx|15270|H2A histone family, member X	BC005468|H2afx|15270|H2A histone family, member X
mm9_v1_chr10_-_127188787_127188853	0.489175	FOXD3.p2	AK031480|Gpr182|11536|G protein-coupled receptor 182	NM_007412|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr2_+_70499545_70499765	0.488914	FOXD3.p2	NM_027352|Gorasp2|70231|golgi reassembly stacking protein 2	AK033413|Gorasp2|70231|golgi reassembly stacking protein 2	AK077683|Gorasp2|70231|golgi reassembly stacking protein 2	AK148337|Gorasp2|70231|golgi reassembly stacking protein 2	AK153555|Gorasp2|70231|golgi reassembly stacking protein 2	AK167823|Gorasp2|70231|golgi reassembly stacking protein 2	AK168928|Gorasp2|70231|golgi reassembly stacking protein 2	AK159469|Gorasp2|70231|golgi reassembly stacking protein 2	AK010664|Gorasp2|70231|golgi reassembly stacking protein 2	AK152603|Gorasp2|70231|golgi reassembly stacking protein 2	BC024982|Gorasp2|70231|golgi reassembly stacking protein 2	AK002515|Gorasp2|70231|golgi reassembly stacking protein 2	AK044691|Gorasp2|70231|golgi reassembly stacking protein 2	AK088239|Gorasp2|70231|golgi reassembly stacking protein 2	AK151843|Gorasp2|70231|golgi reassembly stacking protein 2	AK152475|Gorasp2|70231|golgi reassembly stacking protein 2	AK152544|Gorasp2|70231|golgi reassembly stacking protein 2	AK153049|Gorasp2|70231|golgi reassembly stacking protein 2	AK169382|Gorasp2|70231|golgi reassembly stacking protein 2	AK077153|Gorasp2|70231|golgi reassembly stacking protein 2	BC005600|Gorasp2|70231|golgi reassembly stacking protein 2	AK077706|Gorasp2|70231|golgi reassembly stacking protein 2
mm9_v1_chr10_+_25079603_25079644	0.488017	FOXD3.p2	AK144088|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr1_+_33776715_33776982	0.487479	FOXD3.p2	AK163909|Rab23|19335|RAB23, member RAS oncogene family	AK047068|Rab23|19335|RAB23, member RAS oncogene family	NM_008999|Rab23|19335|RAB23, member RAS oncogene family	AK164057|Rab23|19335|RAB23, member RAS oncogene family	AK054079|Rab23|19335|RAB23, member RAS oncogene family	AK082017|Rab23|19335|RAB23, member RAS oncogene family	BC025578|Rab23|19335|RAB23, member RAS oncogene family	AK045454|Rab23|19335|RAB23, member RAS oncogene family
mm9_v1_chr17_-_34253887_34254086	0.48598	FOXD3.p2	AK179882|Brd2|14312|bromodomain containing 2	AK205877|Brd2|14312|bromodomain containing 2	AK218127|Brd2|14312|bromodomain containing 2	AB212273|Brd2|14312|bromodomain containing 2	AB010248|Brd2|14312|bromodomain containing 2
mm9_v1_chr19_-_41288465_41288553	0.485905	FOXD3.p2	AK077835|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr2_+_69735301_69735369	0.484577	FOXD3.p2	DQ924536|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_001081548|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_177783|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	AK037622|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3
mm9_v1_chr7_+_50432957_50432973	0.483784	FOXD3.p2	AK145615|Zfp936|668620|zinc finger protein 936	NM_001034893|Zfp936|668620|zinc finger protein 936	BC066874|Zfp936|668620|zinc finger protein 936
mm9_v1_chr15_-_97536204_97536244	0.483668	FOXD3.p2	AK169097|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr13_-_24923190_24923228	0.481948	FOXD3.p2	AK212217|Acot13|66834|acyl-CoA thioesterase 13
mm9_v1_chr4_-_58925575_58925638	0.481595	FOXD3.p2	AK087690|AI314180|230249|expressed sequence AI314180	BC058684|AI314180|230249|expressed sequence AI314180	NM_172381|AI314180|230249|expressed sequence AI314180	AK041579|AI314180|230249|expressed sequence AI314180
mm9_v1_chr11_-_62542594_62542594	0.481394	FOXD3.p2	AF281141|Zfp287|170740|zinc finger protein 287	NM_133208|Zfp287|170740|zinc finger protein 287
mm9_v1_chr16_+_45094383_45094406	0.481135	FOXD3.p2	BC058751|Ccdc80|67896|coiled-coil domain containing 80
mm9_v1_chr11_+_114530028_114530110	0.480659	FOXD3.p2	BC094258|Rpl38|67671|ribosomal protein L38	BC094644|Rpl38|67671|ribosomal protein L38	NM_001048058|Rpl38|67671|ribosomal protein L38	BC081447|Rpl38|67671|ribosomal protein L38
mm9_v1_chr2_+_151319915_151320083	0.480307	FOXD3.p2	AK039136|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK137088|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK013024|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	BC050936|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	NM_198326|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	BC106101|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)	AK181317|Nsfl1c|386649|NSFL1 (p97) cofactor (p47)
mm9_v1_chr5_+_135582754_135582797	0.479877	FOXD3.p2	AK143999|Mlxipl|58805|MLX interacting protein-like	AK143800|Mlxipl|58805|MLX interacting protein-like	AF245475|Mlxipl|58805|MLX interacting protein-like	AF245476|Mlxipl|58805|MLX interacting protein-like	AF245477|Mlxipl|58805|MLX interacting protein-like	AF245478|Mlxipl|58805|MLX interacting protein-like	AF245479|Mlxipl|58805|MLX interacting protein-like	NM_021455|Mlxipl|58805|MLX interacting protein-like	AF156604|Mlxipl|58805|MLX interacting protein-like	BC064053|Mlxipl|58805|MLX interacting protein-like
mm9_v1_chr13_-_30637108_30637234	0.479224	FOXD3.p2	AK012180|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK003966|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK153139|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	NM_025710|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK014470|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	BC019934|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	BC047125|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK152391|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
mm9_v1_chr7_-_30638635_30638689	0.478909	FOXD3.p2	AK132317|Zfp940|233057|zinc finger protein 940	AK139326|Zfp940|233057|zinc finger protein 940	BC027344|Zfp940|233057|zinc finger protein 940	NM_173738|Zfp940|233057|zinc finger protein 940	AK137204|Zfp940|233057|zinc finger protein 940	AK141787|Zfp940|233057|zinc finger protein 940
mm9_v1_chr11_-_94410463_94410520	0.478776	FOXD3.p2	BC139274|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC139276|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC145594|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK148401|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK046706|Rsad1|237926|radical S-adenosyl methionine domain containing 1	NM_001013381|Rsad1|237926|radical S-adenosyl methionine domain containing 1
mm9_v1_chr6_+_88045556_88045653	0.476659	FOXD3.p2	BC002175|Rpn1|103963|ribophorin I
mm9_v1_chr11_+_4958024_4958308	0.476566	FOXD3.p2	AK008807|Rasl10a|75668|RAS-like, family 10, member A	AK044011|Rasl10a|75668|RAS-like, family 10, member A	NM_145216|Rasl10a|75668|RAS-like, family 10, member A	BC107200|Rasl10a|75668|RAS-like, family 10, member A	BC107201|Rasl10a|75668|RAS-like, family 10, member A	AF498251|Rasl10a|75668|RAS-like, family 10, member A
mm9_v1_chr11_+_46624300_46624301	0.476222	FOXD3.p2	AK080212|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	NM_178759|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK046560|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK079787|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK080042|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376716|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376717|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4
mm9_v1_chr8_+_72696276_72696336	0.474454	FOXD3.p2	AK032711|Tmem161a|234371|transmembrane protein 161A	AK082916|Tmem161a|234371|transmembrane protein 161A	AK049979|Tmem161a|234371|transmembrane protein 161A	NM_145597|Tmem161a|234371|transmembrane protein 161A	AK082758|Tmem161a|234371|transmembrane protein 161A	AK147962|Tmem161a|234371|transmembrane protein 161A	AK088569|Tmem161a|234371|transmembrane protein 161A	AK167517|Tmem161a|234371|transmembrane protein 161A	BC021367|Tmem161a|234371|transmembrane protein 161A
mm9_v1_chr5_-_87998014_87998030	0.471885	FOXD3.p2	AK160466|Sult1d1|53315|sulfotransferase family 1D, member 1	NM_016771|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr10_-_101953046_101953066	0.471482	FOXD3.p2	AF304160|Nts|67405|neurotensin	BC043024|Nts|67405|neurotensin	NM_024435|Nts|67405|neurotensin	AK017202|Nts|67405|neurotensin	AK017212|Nts|67405|neurotensin
mm9_v1_chr19_+_39081508_39081535	0.470471	FOXD3.p2	AK008580|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55	NM_028089|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55	BC010824|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55	AY206875|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55
mm9_v1_chr8_+_87432522_87432575	0.470413	FOXD3.p2	AK145192|Dnase2a|13423|deoxyribonuclease II alpha	NM_010062|Dnase2a|13423|deoxyribonuclease II alpha	AK167277|Dnase2a|13423|deoxyribonuclease II alpha	BC058609|Dnase2a|13423|deoxyribonuclease II alpha
mm9_v1_chr8_+_13757654_13757836	0.469028	FOXD3.p2	AK147938|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK167965|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK158014|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	BC026606|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	NM_027276|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK168978|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)
mm9_v1_chr15_-_88564636_88564674	0.468921	FOXD3.p2	NM_001033274|Brd1|223770|bromodomain containing 1	AK149714|Brd1|223770|bromodomain containing 1
mm9_v1_chr8_+_122434697_122434814	0.467855	FOXD3.p2	AK077453|Usp10|22224|ubiquitin specific peptidase 10	AK157970|Usp10|22224|ubiquitin specific peptidase 10	AK165156|Usp10|22224|ubiquitin specific peptidase 10	AK172443|Usp10|22224|ubiquitin specific peptidase 10	AK137015|Usp10|22224|ubiquitin specific peptidase 10	AK166243|Usp10|22224|ubiquitin specific peptidase 10	AK129083|Usp10|22224|ubiquitin specific peptidase 10	BC007134|Usp10|22224|ubiquitin specific peptidase 10	D84096|Usp10|22224|ubiquitin specific peptidase 10	NM_009462|Usp10|22224|ubiquitin specific peptidase 10	AK179830|Usp10|22224|ubiquitin specific peptidase 10
mm9_v1_chr11_+_101594269_101594313	0.464721	FOXD3.p2	AK153829|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	NM_144831|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC132445|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK220485|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chr6_+_54545104_54545338	0.464215	FOXD3.p2	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr14_-_27262085_27262124	0.4642	FOXD3.p2	AK146685|Slmap|83997|sarcolemma associated protein	AF304451|Slmap|83997|sarcolemma associated protein	AK044358|Slmap|83997|sarcolemma associated protein
mm9_v1_chr11_-_78510874_78510941	0.462704	FOXD3.p2	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr1_+_88199795_88199833	0.462374	FOXD3.p2	NM_145222|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AK080081|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AF502429|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm9_v1_chr11_+_107340794_107340940	0.461954	FOXD3.p2	AK007619|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK005114|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK152240|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK011806|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK150910|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK152041|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK160283|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	BC004694|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK017843|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK167236|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK008646|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK009969|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK151242|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK162779|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	NM_025894|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	AK007680|Psmd12|66997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
mm9_v1_chr7_-_86611065_86611158	0.461101	FOXD3.p2	BC080291|Polg|18975|polymerase (DNA directed), gamma	BC061472|Polg|18975|polymerase (DNA directed), gamma	AK135341|Polg|18975|polymerase (DNA directed), gamma	U53584|Polg|18975|polymerase (DNA directed), gamma	AK133584|Polg|18975|polymerase (DNA directed), gamma	BC053024|Polg|18975|polymerase (DNA directed), gamma	AK148091|Polg|18975|polymerase (DNA directed), gamma	NM_017462|Polg|18975|polymerase (DNA directed), gamma
mm9_v1_chr11_-_107772661_107772675	0.459716	FOXD3.p2	BC120894|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5	BC120895|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5	AK032548|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5	NM_080644|Cacng5|140723|calcium channel, voltage-dependent, gamma subunit 5
mm9_v1_chr15_+_81494399_81494424	0.458281	FOXD3.p2	BC023933|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	BC030864|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK141810|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr10_+_80720062_80720086	0.458267	FOXD3.p2	X89723|Matk|17179|megakaryocyte-associated tyrosine kinase	BC060086|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr6_-_4036892_4036992	0.457665	FOXD3.p2	AF007552|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	AK078796|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	BC005572|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	NM_009748|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)	AK053940|Bet1|12068|blocked early in transport 1 homolog (S. cerevisiae)
mm9_v1_chr10_+_67000613_67000625	0.455419	FOXD3.p2	AK155585|Egr2|13654|early growth response 2	NM_010118|Egr2|13654|early growth response 2	AK153882|Egr2|13654|early growth response 2	X06746|Egr2|13654|early growth response 2
mm9_v1_chr5_+_136514365_136514365	0.454726	FOXD3.p2	AK052525|Upk3b|100647|uroplakin 3B	NM_175309|Upk3b|100647|uroplakin 3B
mm9_v1_chr11_-_115228986_115229036	0.453606	FOXD3.p2	AK044395|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	AB087506|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	AK049861|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	BC024617|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	NM_175454|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene
mm9_v1_chr10_-_90633199_90633208	0.453089	FOXD3.p2	AK159161|Tmpo|21917|thymopoietin
mm9_v1_chr11_+_101594316_101594341	0.450623	FOXD3.p2	AK172600|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK078552|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK142226|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC065064|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chr6_+_40914752_40914770	0.449581	FOXD3.p2	BC132243|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene	BC132245|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene	AK007406|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene	NM_023707|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene
mm9_v1_chr16_+_29579427_29579538	0.447345	FOXD3.p2	AB044138|Opa1|74143|optic atrophy 1 homolog (human)	NM_133752|Opa1|74143|optic atrophy 1 homolog (human)	AK029157|Opa1|74143|optic atrophy 1 homolog (human)	AK053861|Opa1|74143|optic atrophy 1 homolog (human)	AK004715|Opa1|74143|optic atrophy 1 homolog (human)	AK030835|Opa1|74143|optic atrophy 1 homolog (human)	AK145620|Opa1|74143|optic atrophy 1 homolog (human)	AK038446|Opa1|74143|optic atrophy 1 homolog (human)	BC052704|Opa1|74143|optic atrophy 1 homolog (human)	AK050383|Opa1|74143|optic atrophy 1 homolog (human)	AK164872|Opa1|74143|optic atrophy 1 homolog (human)	AK044657|Opa1|74143|optic atrophy 1 homolog (human)	BC138665|Opa1|74143|optic atrophy 1 homolog (human)	BC145959|Opa1|74143|optic atrophy 1 homolog (human)
mm9_v1_chr15_+_91503654_91503682	0.447188	FOXD3.p2	AK052591|Lrrk2|66725|leucine-rich repeat kinase 2	NM_025730|Lrrk2|66725|leucine-rich repeat kinase 2
mm9_v1_chr11_-_69476065_69476093	0.44633	FOXD3.p2	BC026776|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK172020|Mpdu1|24070|mannose-P-dolichol utilization defect 1	BC048871|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AB024713|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK040432|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK089426|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr8_-_26864848_26864892	0.445309	FOXD3.p2	AK079311|Ddhd2|72108|DDHD domain containing 2	AK035532|Ddhd2|72108|DDHD domain containing 2
mm9_v1_chr19_+_22767272_22767282	0.445207	FOXD3.p2	AK053673|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK046908|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK077331|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK082141|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK142504|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK161909|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK163890|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr5_-_102093635_102093729	0.445121	FOXD3.p2	BC138019|Nkx6-1|18096|NK6 homeobox 1	BC138020|Nkx6-1|18096|NK6 homeobox 1	AF357883|Nkx6-1|18096|NK6 homeobox 1	NM_144955|Nkx6-1|18096|NK6 homeobox 1
mm9_v1_chr2_+_162762650_162762674	0.445109	FOXD3.p2	
mm9_v1_chr1_-_173177212_173177226	0.444968	FOXD3.p2	AK151746|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	AK153364|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2	BC003898|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr8_-_108224931_108224989	0.442959	FOXD3.p2	AK171345|Acd|497652|adrenocortical dysplasia	AK160599|Acd|497652|adrenocortical dysplasia	BC138694|Acd|497652|adrenocortical dysplasia	BC138695|Acd|497652|adrenocortical dysplasia	BC145384|Acd|497652|adrenocortical dysplasia	AK032683|Acd|497652|adrenocortical dysplasia	AK145959|Acd|497652|adrenocortical dysplasia	AK171458|Acd|497652|adrenocortical dysplasia	AK052768|Acd|497652|adrenocortical dysplasia
mm9_v1_chr8_-_73421276_73421316	0.442496	FOXD3.p2	BC024609|Rpl18a|76808|ribosomal protein L18A	AK150820|Rpl18a|76808|ribosomal protein L18A	AK152611|Rpl18a|76808|ribosomal protein L18A	AK168258|Rpl18a|76808|ribosomal protein L18A	AK010983|Rpl18a|76808|ribosomal protein L18A	AK146543|Rpl18a|76808|ribosomal protein L18A	AK161942|Rpl18a|76808|ribosomal protein L18A	AK162047|Rpl18a|76808|ribosomal protein L18A	NM_001111116|Gm15427|100041686|predicted pseudogene 15427
mm9_v1_chr11_+_60166826_60166909	0.442172	FOXD3.p2	AK047468|Lrrc48|74665|leucine rich repeat containing 48	AK049695|Lrrc48|74665|leucine rich repeat containing 48	BC018412|Lrrc48|74665|leucine rich repeat containing 48	AK015430|Lrrc48|74665|leucine rich repeat containing 48	NM_029044|Lrrc48|74665|leucine rich repeat containing 48
mm9_v1_chr16_+_29209780_29209780	0.442109	FOXD3.p2	AK039471|Hrasls|27281|HRAS-like suppressor	NM_013751|Hrasls|27281|HRAS-like suppressor
mm9_v1_chr7_+_23198601_23198601	0.441531	FOXD3.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr2_+_29790925_29791015	0.441398	FOXD3.p2	NM_028923|Gle1|74412|GLE1 RNA export mediator (yeast)	AK028183|Gle1|74412|GLE1 RNA export mediator (yeast)	AK016671|Gle1|74412|GLE1 RNA export mediator (yeast)	AK161659|Gle1|74412|GLE1 RNA export mediator (yeast)	AK145748|Gle1|74412|GLE1 RNA export mediator (yeast)	AK150230|Gle1|74412|GLE1 RNA export mediator (yeast)	BC026797|Gle1|74412|GLE1 RNA export mediator (yeast)	AK029395|Gle1|74412|GLE1 RNA export mediator (yeast)	AK133888|Gle1|74412|GLE1 RNA export mediator (yeast)	AK161015|Gle1|74412|GLE1 RNA export mediator (yeast)
mm9_v1_chr2_+_91570304_91570382	0.439577	FOXD3.p2	AK148887|Ambra1|228361|autophagy/beclin 1 regulator 1	AK084557|Ambra1|228361|autophagy/beclin 1 regulator 1	AK155513|Ambra1|228361|autophagy/beclin 1 regulator 1	AK037516|Ambra1|228361|autophagy/beclin 1 regulator 1	AK083596|Ambra1|228361|autophagy/beclin 1 regulator 1	AK169280|Ambra1|228361|autophagy/beclin 1 regulator 1	BC054082|Ambra1|228361|autophagy/beclin 1 regulator 1	BC032293|Ambra1|228361|autophagy/beclin 1 regulator 1
mm9_v1_chr5_+_130263548_130263603	0.43912	FOXD3.p2	AK199226|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr7_-_29965500_29965550	0.43907	FOXD3.p2	BC004075|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159795|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159926|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK166718|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK002921|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK003436|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK153329|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150493|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK051257|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK020132|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr4_+_21774729_21774865	0.438628	FOXD3.p2	NM_025669|Sfrs18|66625|serine/arginine-rich splicing factor 18	BC141031|Sfrs18|66625|serine/arginine-rich splicing factor 18
mm9_v1_chr17_+_46298019_46298034	0.437765	FOXD3.p2	BC049089|Gtpbp2|56055|GTP binding protein 2	BC051958|Gtpbp2|56055|GTP binding protein 2	AK146415|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chr7_+_28376578_28376874	0.437266	FOXD3.p2	AK158792|Akt2|11652|thymoma viral proto-oncogene 2	NM_001110208|Akt2|11652|thymoma viral proto-oncogene 2	AK144217|Akt2|11652|thymoma viral proto-oncogene 2	U22445|Akt2|11652|thymoma viral proto-oncogene 2
mm9_v1_chr3_+_19869841_19869871	0.435385	FOXD3.p2	AK160035|Cp|12870|ceruloplasmin
mm9_v1_chr6_+_86145477_86145494	0.435275	FOXD3.p2	AK162680|Tgfa|21802|transforming growth factor alpha	M92420|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr1_+_163072784_163072870	0.433355	FOXD3.p2	AK016757|Ankrd45|73844|ankyrin repeat domain 45	NM_028664|Ankrd45|73844|ankyrin repeat domain 45	BC049713|Ankrd45|73844|ankyrin repeat domain 45
mm9_v1_chr15_+_43308843_43308848	0.433224	FOXD3.p2	AF332065|Ttc35|66736|tetratricopeptide repeat domain 35	AF332066|Ttc35|66736|tetratricopeptide repeat domain 35
mm9_v1_chr6_+_29417738_29417806	0.433155	FOXD3.p2	AK152929|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK007327|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	NM_025381|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK003419|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK152153|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F	AK152959|Atp6v1f|66144|ATPase, H+ transporting, lysosomal V1 subunit F
mm9_v1_chr13_+_31898501_31898514	0.432963	FOXD3.p2	BC027689|Foxc1|17300|forkhead box C1	NM_008592|Foxc1|17300|forkhead box C1
mm9_v1_chr11_-_100217433_100217454	0.432451	FOXD3.p2	BC053043|Hap1|15114|huntingtin-associated protein 1	NM_010404|Hap1|15114|huntingtin-associated protein 1	NM_177981|Hap1|15114|huntingtin-associated protein 1
mm9_v1_chr18_+_77365613_77365672	0.431354	FOXD3.p2	AK078097|Pias2|17344|protein inhibitor of activated STAT 2
mm9_v1_chr18_-_61867246_61867319	0.431152	FOXD3.p2	BC060677|Pcyox1l|240334|prenylcysteine oxidase 1 like	AK050006|Pcyox1l|240334|prenylcysteine oxidase 1 like	NM_172832|Pcyox1l|240334|prenylcysteine oxidase 1 like
mm9_v1_chr17_+_56904233_56904237	0.430861	FOXD3.p2	AK157702|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)
mm9_v1_chr9_+_3335472_3335500	0.429828	FOXD3.p2	AK020197|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK054267|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK081459|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK133489|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK041810|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK033352|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)
mm9_v1_chr2_-_6134067_6134104	0.429731	FOXD3.p2	AK014736|Echdc3|67856|enoyl Coenzyme A hydratase domain containing 3
mm9_v1_chr9_+_59526881_59526990	0.429507	FOXD3.p2	AK187622|Pkm2|18746|pyruvate kinase, muscle	AK189986|Pkm2|18746|pyruvate kinase, muscle	AK191750|Pkm2|18746|pyruvate kinase, muscle	AK193178|Pkm2|18746|pyruvate kinase, muscle	AK194857|Pkm2|18746|pyruvate kinase, muscle	AK195839|Pkm2|18746|pyruvate kinase, muscle	AK196046|Pkm2|18746|pyruvate kinase, muscle	AK196682|Pkm2|18746|pyruvate kinase, muscle	AK198278|Pkm2|18746|pyruvate kinase, muscle	AK198346|Pkm2|18746|pyruvate kinase, muscle	AK198579|Pkm2|18746|pyruvate kinase, muscle	AK199500|Pkm2|18746|pyruvate kinase, muscle	AK200354|Pkm2|18746|pyruvate kinase, muscle	AK201799|Pkm2|18746|pyruvate kinase, muscle	AK204154|Pkm2|18746|pyruvate kinase, muscle	AK219384|Pkm2|18746|pyruvate kinase, muscle	AK197608|Pkm2|18746|pyruvate kinase, muscle
mm9_v1_chr9_-_123626642_123626742	0.428744	FOXD3.p2	AK046515|Lztfl1|93730|leucine zipper transcription factor-like 1	BC037045|Lztfl1|93730|leucine zipper transcription factor-like 1	AJ297352|Lztfl1|93730|leucine zipper transcription factor-like 1	BC098224|Lztfl1|93730|leucine zipper transcription factor-like 1	BC026840|Lztfl1|93730|leucine zipper transcription factor-like 1	NM_033322|Lztfl1|93730|leucine zipper transcription factor-like 1	AK054003|Lztfl1|93730|leucine zipper transcription factor-like 1	AK157770|Lztfl1|93730|leucine zipper transcription factor-like 1	AK145263|Lztfl1|93730|leucine zipper transcription factor-like 1	AK030068|Lztfl1|93730|leucine zipper transcription factor-like 1	AK029671|Lztfl1|93730|leucine zipper transcription factor-like 1	AK041091|Lztfl1|93730|leucine zipper transcription factor-like 1	AK147312|Lztfl1|93730|leucine zipper transcription factor-like 1
mm9_v1_chr2_-_151805954_151805955	0.427347	FOXD3.p2	NM_146127|Fam110a|73847|family with sequence similarity 110, member A
mm9_v1_chr5_-_115273443_115273497	0.427041	FOXD3.p2	AK148078|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC089033|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC096574|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	AK012147|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	NM_181075|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene
mm9_v1_chr7_-_87547589_87547748	0.426531	FOXD3.p2	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr9_-_97011440_97011575	0.426289	FOXD3.p2	BC008171|Slc25a36|192287|solute carrier family 25, member 36	AK078779|Slc25a36|192287|solute carrier family 25, member 36	NM_138756|Slc25a36|192287|solute carrier family 25, member 36	AK042075|Slc25a36|192287|solute carrier family 25, member 36	AK053646|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr13_+_27288527_27288540	0.425198	FOXD3.p2	AF150740|Prl3c1|27372|prolactin family 3, subfamily c, member 1	AF234637|Prl3c1|27372|prolactin family 3, subfamily c, member 1	NM_013766|Prl3c1|27372|prolactin family 3, subfamily c, member 1	AB019118|Prl3c1|27372|prolactin family 3, subfamily c, member 1	BC120576|Prl3c1|27372|prolactin family 3, subfamily c, member 1	BC120578|Prl3c1|27372|prolactin family 3, subfamily c, member 1
mm9_v1_chr9_+_46081146_46081375	0.424556	FOXD3.p2	NM_011752|Zfp259|22687|zinc finger protein 259	AK158995|Zfp259|22687|zinc finger protein 259	AK170372|Zfp259|22687|zinc finger protein 259	AK044472|Zfp259|22687|zinc finger protein 259	AB041612|Zfp259|22687|zinc finger protein 259	BC021397|Zfp259|22687|zinc finger protein 259	AK167849|Zfp259|22687|zinc finger protein 259	AK168061|Zfp259|22687|zinc finger protein 259	AK215085|Zfp259|22687|zinc finger protein 259
mm9_v1_chr3_+_75361454_75361503	0.424205	FOXD3.p2	NM_009250|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK032152|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AK133770|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	BC006776|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1	AJ001700|Serpini1|20713|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm9_v1_chr17_+_31433694_31433709	0.422928	FOXD3.p2	AK033656|Slc37a1|224674|solute carrier family 37 (glycerol-3-phosphate transporter), member 1
mm9_v1_chrX_+_70587906_70588053	0.420831	FOXD3.p2	NM_031494|Zfp275|27081|zinc finger protein 275	AK142957|Zfp275|27081|zinc finger protein 275	NM_001160229|Zfp275|27081|zinc finger protein 275	BC138002|Zfp275|27081|zinc finger protein 275	BC138003|Zfp275|27081|zinc finger protein 275
mm9_v1_chr2_+_181287207_181287250	0.420644	FOXD3.p2	AK135001|Dnajc5|13002|DnaJ (Hsp40) homolog, subfamily C, member 5
mm9_v1_chr2_+_154262286_154262318	0.420206	FOXD3.p2	BC138410|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC145266|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC145679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK153602|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr5_+_29524545_29524545	0.419925	FOXD3.p2	AF190664|Rnf32|56874|ring finger protein 32	NM_021470|Rnf32|56874|ring finger protein 32
mm9_v1_chr11_+_101526871_101526892	0.419682	FOXD3.p2	AK004126|Arl4d|80981|ADP-ribosylation factor-like 4D	AK013320|Arl4d|80981|ADP-ribosylation factor-like 4D	BC016113|Arl4d|80981|ADP-ribosylation factor-like 4D
mm9_v1_chrX_-_163023624_163023647	0.418219	FOXD3.p2	AK078534|Egfl6|54156|EGF-like-domain, multiple 6	BC117702|Egfl6|54156|EGF-like-domain, multiple 6	AJ245672|Egfl6|54156|EGF-like-domain, multiple 6	AK053738|Egfl6|54156|EGF-like-domain, multiple 6	NM_019397|Egfl6|54156|EGF-like-domain, multiple 6
mm9_v1_chr2_+_127429570_127429640	0.417288	FOXD3.p2	AK047438|Mrps5|77721|mitochondrial ribosomal protein S5
mm9_v1_chr11_-_69227176_69227176	0.416791	FOXD3.p2	NM_001017426|Kdm6b|216850|KDM1 lysine (K)-specific demethylase 6B
mm9_v1_chr18_+_44166024_44166085	0.416137	FOXD3.p2	AK028727|Spink5|72432|serine peptidase inhibitor, Kazal type 5
mm9_v1_chr2_-_122011924_122011924	0.415979	FOXD3.p2	AK015195|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)	NM_026251|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)
mm9_v1_chr14_+_58445584_58445682	0.415526	FOXD3.p2	AK212819|Mrp63|67840|mitochondrial ribosomal protein 63
mm9_v1_chr9_-_58160966_58161035	0.414742	FOXD3.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr8_-_72758275_72758364	0.414681	FOXD3.p2	BC048396|Armc6|76813|armadillo repeat containing 6	BC043070|Armc6|76813|armadillo repeat containing 6	BC055779|Armc6|76813|armadillo repeat containing 6	NM_133972|Armc6|76813|armadillo repeat containing 6	AK010815|Armc6|76813|armadillo repeat containing 6	AK081550|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr13_+_30428224_30428325	0.414677	FOXD3.p2	NM_177322|Agtr1a|11607|angiotensin II receptor, type 1a	AK007990|Agtr1a|11607|angiotensin II receptor, type 1a	BC036175|Agtr1a|11607|angiotensin II receptor, type 1a
mm9_v1_chr2_+_125499344_125499369	0.41361	FOXD3.p2	AL357452|Eid1|58521|EP300 interacting inhibitor of differentiation 1
mm9_v1_chr18_+_62708564_62708648	0.412633	FOXD3.p2	AK039062|Spink10|328971|serine peptidase inhibitor, Kazal type 10	DQ437330|Spink10|328971|serine peptidase inhibitor, Kazal type 10	NM_177829|Spink10|328971|serine peptidase inhibitor, Kazal type 10	AK162840|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125360|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125362|Spink10|328971|serine peptidase inhibitor, Kazal type 10
mm9_v1_chr2_+_37298785_37298902	0.412545	FOXD3.p2	NM_146121|Rabgap1|227800|RAB GTPase activating protein 1	AK031315|Rabgap1|227800|RAB GTPase activating protein 1	AK021286|Rabgap1|227800|RAB GTPase activating protein 1	BC138337|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr11_+_108781772_108781797	0.41248	FOXD3.p2	AF073788|Axin2|12006|axin2
mm9_v1_chr7_-_29123383_29123453	0.411597	FOXD3.p2	BC058598|Supt5h|20924|suppressor of Ty 5 homolog (S. cerevisiae)
mm9_v1_chr8_-_87366624_87366670	0.41132	FOXD3.p2	X56603|Calr|12317|calreticulin
mm9_v1_chr15_-_71558142_71558267	0.411183	FOXD3.p2	BC125645|Fam135b|70363|family with sequence similarity 135, member B	BC125647|Fam135b|70363|family with sequence similarity 135, member B	AK043571|Fam135b|70363|family with sequence similarity 135, member B	NM_177819|Fam135b|70363|family with sequence similarity 135, member B
mm9_v1_chr8_-_87784612_87784676	0.410988	FOXD3.p2	AK219106|Vps35|65114|vacuolar protein sorting 35
mm9_v1_chr14_+_63756868_63756897	0.409991	FOXD3.p2	AK192818|Ctsb|13030|cathepsin B	AK196522|Ctsb|13030|cathepsin B
mm9_v1_chr2_-_44717141_44717141	0.409927	FOXD3.p2	AK054272|Gtdc1|227835|glycosyltransferase-like domain containing 1	NM_172662|Gtdc1|227835|glycosyltransferase-like domain containing 1
mm9_v1_chr5_+_96204888_96204888	0.409919	FOXD3.p2	AK087741|E330014E10Rik|665943|RIKEN cDNA E330014E10 gene	NM_001122668|E330014E10Rik|665943|RIKEN cDNA E330014E10 gene
mm9_v1_chr14_-_52898915_52898939	0.409864	FOXD3.p2	AB232586|Rab2b|76338|RAB2B, member RAS oncogene family	AK160351|Rab2b|76338|RAB2B, member RAS oncogene family
mm9_v1_chr4_+_59639079_59639315	0.409776	FOXD3.p2	AK047478|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	AK087509|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	NM_153158|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	AK047601|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	AK081604|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	NM_001015681|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	BC037070|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene	BC017649|E130308A19Rik|230259|RIKEN cDNA E130308A19 gene
mm9_v1_chr16_+_36885096_36885119	0.408497	FOXD3.p2	NM_030035|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	BC145221|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1	BC150731|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr2_-_157172367_157172390	0.407727	FOXD3.p2	BC068204|Ghrh|14601|growth hormone releasing hormone	AK005392|Ghrh|14601|growth hormone releasing hormone	AK018796|Ghrh|14601|growth hormone releasing hormone	AK018816|Ghrh|14601|growth hormone releasing hormone	NM_010285|Ghrh|14601|growth hormone releasing hormone
mm9_v1_chr4_-_147525786_147525899	0.4057	FOXD3.p2	BC017512|Fbxo6|50762|F-box protein 6	AK152888|Fbxo6|50762|F-box protein 6
mm9_v1_chr12_-_82695968_82696003	0.405217	FOXD3.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr17_+_56239829_56239958	0.404901	FOXD3.p2	
mm9_v1_chr7_+_21003290_21003290	0.404794	FOXD3.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr6_+_116288073_116288073	0.404497	FOXD3.p2	AK165647|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr12_+_60232417_60232447	0.404349	FOXD3.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr11_-_40508405_40508442	0.40359	FOXD3.p2	AK075600|Mat2b|108645|methionine adenosyltransferase II, beta	AK075947|Mat2b|108645|methionine adenosyltransferase II, beta	AK162087|Mat2b|108645|methionine adenosyltransferase II, beta
mm9_v1_chr4_+_97444494_97444517	0.402699	FOXD3.p2	AK052204|Nfia|18027|nuclear factor I/A
mm9_v1_chr15_-_101755120_101755167	0.402591	FOXD3.p2	BC145839|Krt4|16682|keratin 4	BC145841|Krt4|16682|keratin 4	BC064008|Krt4|16682|keratin 4	NM_008475|Krt4|16682|keratin 4
mm9_v1_chr16_-_10543121_10543218	0.40183	FOXD3.p2	BC017551|Dexi|58239|dexamethasone-induced transcript	AK007644|Dexi|58239|dexamethasone-induced transcript	AK032104|Dexi|58239|dexamethasone-induced transcript	NM_021428|Dexi|58239|dexamethasone-induced transcript
mm9_v1_chr1_-_172145521_172145534	0.401433	FOXD3.p2	BC058732|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	NM_010633|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	AK013347|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr10_+_111520409_111520427	0.400492	FOXD3.p2	AK014846|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK161292|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	BC118017|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	NM_026223|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK015834|Glipr1l2|67537|GLI pathogenesis-related 1 like 2
mm9_v1_chrX_-_153853209_153853243	0.399342	FOXD3.p2	U49908|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	NM_011077|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	U73910|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	AK158481|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)
mm9_v1_chr10_-_75243786_75243866	0.399149	FOXD3.p2	BC003903|Gstt3|103140|glutathione S-transferase, theta 3	AK168226|Gstt3|103140|glutathione S-transferase, theta 3	AK138669|Gstt3|103140|glutathione S-transferase, theta 3	AK154161|Gstt3|103140|glutathione S-transferase, theta 3
mm9_v1_chr3_+_105762425_105762460	0.397693	FOXD3.p2	AK012014|Wdr77|70465|WD repeat domain 77	AK161812|Wdr77|70465|WD repeat domain 77	BC005755|Wdr77|70465|WD repeat domain 77
mm9_v1_chr16_+_43321404_43321450	0.396972	FOXD3.p2	
mm9_v1_chr12_+_75398460_75398460	0.396857	FOXD3.p2	NM_198866|Dbpht2|386753|DNA binding protein with his-thr domain
mm9_v1_chr17_+_36974140_36974211	0.396293	FOXD3.p2	AK148247|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr3_+_51298674_51298675	0.39562	FOXD3.p2	AK038231|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr8_+_86525604_86525604	0.395347	FOXD3.p2	BC147276|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC147277|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172025|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172026|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	NM_183097|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene
mm9_v1_chr14_-_21299301_21299354	0.395343	FOXD3.p2	NM_001110794|Anxa7|11750|annexin A7	NM_009674|Anxa7|11750|annexin A7
mm9_v1_chr11_+_90110835_90110949	0.395305	FOXD3.p2	AK004819|Mmd|67468|monocyte to macrophage differentiation-associated	AK158577|Mmd|67468|monocyte to macrophage differentiation-associated	AK171637|Mmd|67468|monocyte to macrophage differentiation-associated	AK149704|Mmd|67468|monocyte to macrophage differentiation-associated	BC028492|Mmd|67468|monocyte to macrophage differentiation-associated	BC076566|Mmd|67468|monocyte to macrophage differentiation-associated	AY424300|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr8_+_125966855_125966934	0.394775	FOXD3.p2	AK081295|Def8|23854|differentially expressed in FDCP 8	AK133979|Def8|23854|differentially expressed in FDCP 8	AK028726|Def8|23854|differentially expressed in FDCP 8	AK050405|Def8|23854|differentially expressed in FDCP 8	AK087778|Def8|23854|differentially expressed in FDCP 8	AK164147|Def8|23854|differentially expressed in FDCP 8	NM_054046|Def8|23854|differentially expressed in FDCP 8	AK034028|Def8|23854|differentially expressed in FDCP 8	AK046271|Def8|23854|differentially expressed in FDCP 8	AK086174|Def8|23854|differentially expressed in FDCP 8	BC003306|Def8|23854|differentially expressed in FDCP 8	AK150334|Def8|23854|differentially expressed in FDCP 8	AK150994|Def8|23854|differentially expressed in FDCP 8
mm9_v1_chr9_-_53475519_53475552	0.393727	FOXD3.p2	BC075710|Cul5|75717|cullin 5
mm9_v1_chr6_-_85854877_85854931	0.391883	FOXD3.p2	BC029200|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene	NM_029331|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene
mm9_v1_chr5_-_77543903_77543908	0.391414	FOXD3.p2	AK004798|Hopx|74318|HOP homeobox	AK009007|Hopx|74318|HOP homeobox
mm9_v1_chr12_-_80007923_80007953	0.390976	FOXD3.p2	BC028902|Plek2|27260|pleckstrin 2	NM_013738|Plek2|27260|pleckstrin 2	AF170564|Plek2|27260|pleckstrin 2
mm9_v1_chr4_+_15211137_15211173	0.390541	FOXD3.p2	AK162736|Tmem64|100201|transmembrane protein 64
mm9_v1_chr10_-_12581443_12581532	0.388977	FOXD3.p2	Y12229|Utrn|22288|utrophin	NM_011682|Utrn|22288|utrophin
mm9_v1_chr2_+_30808463_30808542	0.388965	FOXD3.p2	AK054404|Tor1b|30934|torsin family 1, member B	AK169692|Tor1b|30934|torsin family 1, member B	AK017290|Tor1b|30934|torsin family 1, member B	AK149754|Tor1b|30934|torsin family 1, member B	AJ297743|Tor1b|30934|torsin family 1, member B	NM_133673|Tor1b|30934|torsin family 1, member B	BC018456|Tor1b|30934|torsin family 1, member B	AK159843|Tor1b|30934|torsin family 1, member B
mm9_v1_chrX_+_137909951_137910122	0.387231	FOXD3.p2	AK133179|Col4a5|12830|collagen, type IV, alpha 5	NM_001163155|Col4a5|12830|collagen, type IV, alpha 5	NM_007736|Col4a5|12830|collagen, type IV, alpha 5	AB041350|Col4a5|12830|collagen, type IV, alpha 5	BC082788|Col4a5|12830|collagen, type IV, alpha 5
mm9_v1_chr2_+_32127324_32127335	0.387056	FOXD3.p2	NM_001195765|Gm13611|622534|predicted gene 13611
mm9_v1_chr17_+_26389850_26389887	0.386492	FOXD3.p2	AK160293|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	NM_025881|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	NM_028190|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr8_-_8690519_8690552	0.386077	FOXD3.p2	BC046971|Arglu1|234023|arginine and glutamate rich 1	NM_176849|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr7_+_27814096_27814122	0.385861	FOXD3.p2	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr2_+_69058005_69058054	0.385402	FOXD3.p2	AK148450|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	Z47787|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	BC111905|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	AK148465|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	NM_021331|G6pc2|14378|glucose-6-phosphatase, catalytic, 2
mm9_v1_chr12_+_4850108_4850199	0.385119	FOXD3.p2	NM_001170858|BC068281|238037|cDNA sequence BC068281	NM_173416|BC068281|238037|cDNA sequence BC068281	AK163398|BC068281|238037|cDNA sequence BC068281	AK040407|BC068281|238037|cDNA sequence BC068281	BC068281|BC068281|238037|cDNA sequence BC068281	AK155130|BC068281|238037|cDNA sequence BC068281	AK164024|BC068281|238037|cDNA sequence BC068281
mm9_v1_chr14_-_56778401_56778415	0.384811	FOXD3.p2	J02872|Gzmg|14944|granzyme G	BC099473|Gzmg|14944|granzyme G	NM_010375|Gzmg|14944|granzyme G
mm9_v1_chr8_-_106772390_106772476	0.384404	FOXD3.p2	AF105217|Tk2|57813|thymidine kinase 2, mitochondrial	AJ249341|Tk2|57813|thymidine kinase 2, mitochondrial	BC019982|Tk2|57813|thymidine kinase 2, mitochondrial	AK041651|Tk2|57813|thymidine kinase 2, mitochondrial	AK051286|Tk2|57813|thymidine kinase 2, mitochondrial	AK154160|Tk2|57813|thymidine kinase 2, mitochondrial	AK087557|Tk2|57813|thymidine kinase 2, mitochondrial	NM_021028|Tk2|57813|thymidine kinase 2, mitochondrial
mm9_v1_chr4_-_88204148_88204148	0.383615	FOXD3.p2	BC116216|Gm12597|242517|predicted gene 12597	NM_206870|Gm12597|242517|predicted gene 12597
mm9_v1_chr11_-_61575474_61575589	0.383551	FOXD3.p2	BC051438|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC106185|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK076811|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK077330|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK038680|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC023178|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164242|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164243|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164244|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_144806|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2
mm9_v1_chr5_-_110537215_110537219	0.383381	FOXD3.p2	AK144812|Gtpbp6|107999|GTP binding protein 6 (putative)	AK152225|Gtpbp6|107999|GTP binding protein 6 (putative)	AK152972|Gtpbp6|107999|GTP binding protein 6 (putative)	NM_145147|Gtpbp6|107999|GTP binding protein 6 (putative)
mm9_v1_chr7_-_152125661_152125812	0.381965	FOXD3.p2	AK170833|Ccnd1|12443|cyclin D1	BC060172|Ccnd1|12443|cyclin D1	BC044841|Ccnd1|12443|cyclin D1	AK149905|Ccnd1|12443|cyclin D1	S78355|Ccnd1|12443|cyclin D1	AK053348|Ccnd1|12443|cyclin D1	AK164997|Ccnd1|12443|cyclin D1	M64403|Ccnd1|12443|cyclin D1	AK017834|Ccnd1|12443|cyclin D1
mm9_v1_chr10_+_110917672_110917672	0.380692	FOXD3.p2	AK050375|Nap1l1|53605|nucleosome assembly protein 1-like 1	NM_001146707|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr15_-_82953160_82953169	0.380661	FOXD3.p2	FJ687153|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	BC012523|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm9_v1_chr5_-_144090853_144090920	0.378904	FOXD3.p2	AK156167|Zdhhc4|72881|zinc finger, DHHC domain containing 4	BC019523|Zdhhc4|72881|zinc finger, DHHC domain containing 4	AK013609|Zdhhc4|72881|zinc finger, DHHC domain containing 4	NM_028379|Zdhhc4|72881|zinc finger, DHHC domain containing 4
mm9_v1_chr6_-_127100954_127101069	0.37862	FOXD3.p2	M86182|Ccnd2|12444|cyclin D2	AK007904|Ccnd2|12444|cyclin D2	AK011412|Ccnd2|12444|cyclin D2	AK077367|Ccnd2|12444|cyclin D2	AK147345|Ccnd2|12444|cyclin D2	AK160751|Ccnd2|12444|cyclin D2	AK168954|Ccnd2|12444|cyclin D2	BC049086|Ccnd2|12444|cyclin D2	M83749|Ccnd2|12444|cyclin D2	NM_009829|Ccnd2|12444|cyclin D2
mm9_v1_chr2_+_101726413_101726444	0.378384	FOXD3.p2	AK154731|Commd9|76501|COMM domain containing 9	AK007640|Commd9|76501|COMM domain containing 9	NM_029635|Commd9|76501|COMM domain containing 9	BC060058|Commd9|76501|COMM domain containing 9	BC030374|Commd9|76501|COMM domain containing 9	BC040688|Commd9|76501|COMM domain containing 9	BC043684|Commd9|76501|COMM domain containing 9
mm9_v1_chr7_+_51080819_51080819	0.377288	FOXD3.p2	NM_011177|Klk6|19144|kallikrein related-peptidase 6	Y18723|Klk6|19144|kallikrein related-peptidase 6
mm9_v1_chr8_+_73051651_73051898	0.377253	FOXD3.p2	AK167663|Fkbp8|14232|FK506 binding protein 8	AK158155|Fkbp8|14232|FK506 binding protein 8	AY278608|Fkbp8|14232|FK506 binding protein 8	BC027808|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr11_-_51449228_51449289	0.377218	FOXD3.p2	BC016075|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chrX_-_153929935_153930011	0.376528	FOXD3.p2	AK017775|Sms|20603|spermine synthase	Y09419|Sms|20603|spermine synthase	BC046623|Sms|20603|spermine synthase	AF031486|Sms|20603|spermine synthase	AK049787|Sms|20603|spermine synthase	AK160637|Sms|20603|spermine synthase	AK149929|Sms|20603|spermine synthase	AK002687|Sms|20603|spermine synthase	AK049780|Sms|20603|spermine synthase	AK136798|Sms|20603|spermine synthase	AK011542|Sms|20603|spermine synthase	AK160659|Sms|20603|spermine synthase	NM_009214|Sms|20603|spermine synthase	AK166665|Sms|20603|spermine synthase
mm9_v1_chr17_-_6132461_6132616	0.375794	FOXD3.p2	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene
mm9_v1_chr17_+_32185229_32185229	0.375289	FOXD3.p2	AK129078|Rrp1b|72462|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_001163734|Rrp1b|72462|ribosomal RNA processing 1 homolog B (S. cerevisiae)
mm9_v1_chr7_-_52622373_52622397	0.374612	FOXD3.p2	AK147645|Ppfia3|76787|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3	NM_029741|Ppfia3|76787|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm9_v1_chr2_+_80479021_80479037	0.373522	FOXD3.p2	AK009187|Nup35|69482|nucleoporin 35	AK145775|Nup35|69482|nucleoporin 35
mm9_v1_chr9_+_121686724_121687001	0.373359	FOXD3.p2	BC125576|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	BC137889|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	NM_028202|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	AK009491|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	AK078669|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5	AK160799|Kbtbd5|72330|kelch repeat and BTB (POZ) domain containing 5
mm9_v1_chr7_-_86293852_86293959	0.37297	FOXD3.p2	AB021130|Mfge8|17304|milk fat globule-EGF factor 8 protein	AB025280|Mfge8|17304|milk fat globule-EGF factor 8 protein	Y11684|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK209209|Mfge8|17304|milk fat globule-EGF factor 8 protein	BC018577|Mfge8|17304|milk fat globule-EGF factor 8 protein	BC003904|Mfge8|17304|milk fat globule-EGF factor 8 protein	BC003892|Mfge8|17304|milk fat globule-EGF factor 8 protein	M38337|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK089211|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK145183|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK169997|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK170935|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK171143|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK148371|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK087555|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK152088|Mfge8|17304|milk fat globule-EGF factor 8 protein	AK155047|Mfge8|17304|milk fat globule-EGF factor 8 protein	NM_001045489|Mfge8|17304|milk fat globule-EGF factor 8 protein	NM_008594|Mfge8|17304|milk fat globule-EGF factor 8 protein
mm9_v1_chr5_+_138526345_138526361	0.372693	FOXD3.p2	BC052441|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK135999|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr6_-_130336891_130336991	0.368967	FOXD3.p2	AY078436|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	NM_016659|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF419250|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF444273|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1
mm9_v1_chr18_+_34932278_34932429	0.36803	FOXD3.p2	AK012724|Fam53c|66306|family with sequence similarity 53, member C	AK205811|Fam53c|66306|family with sequence similarity 53, member C
mm9_v1_chr10_-_94786198_94786320	0.367816	FOXD3.p2	AJ224740|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain	AK131713|Cradd|12905|CASP2 and RIPK1 domain containing adaptor with death domain
mm9_v1_chr7_+_28018002_28018114	0.367668	FOXD3.p2	NM_133770|Adck4|76889|aarF domain containing kinase 4	AK002619|Adck4|76889|aarF domain containing kinase 4
mm9_v1_chr13_+_97907891_97907994	0.365813	FOXD3.p2	AK044371|Gfm2|320806|G elongation factor, mitochondrial 2	NM_001146043|Gfm2|320806|G elongation factor, mitochondrial 2	NM_177266|Gfm2|320806|G elongation factor, mitochondrial 2	AK165871|Gfm2|320806|G elongation factor, mitochondrial 2	AK028450|Gfm2|320806|G elongation factor, mitochondrial 2	AK082054|Gfm2|320806|G elongation factor, mitochondrial 2	AK167185|Gfm2|320806|G elongation factor, mitochondrial 2	AK035819|Gfm2|320806|G elongation factor, mitochondrial 2	AK020100|Gfm2|320806|G elongation factor, mitochondrial 2	AK161797|Gfm2|320806|G elongation factor, mitochondrial 2	AK083441|Gfm2|320806|G elongation factor, mitochondrial 2	BC138233|Gfm2|320806|G elongation factor, mitochondrial 2	BC145208|Gfm2|320806|G elongation factor, mitochondrial 2
mm9_v1_chr15_-_99650502_99650572	0.365755	FOXD3.p2	AF307844|Lima1|65970|LIM domain and actin binding 1	AK028186|Lima1|65970|LIM domain and actin binding 1	AK031698|Lima1|65970|LIM domain and actin binding 1	AK132314|Lima1|65970|LIM domain and actin binding 1	AK085065|Lima1|65970|LIM domain and actin binding 1	NM_023063|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr15_-_74539699_74539729	0.365623	FOXD3.p2	AK171809|Jrk|16469|jerky	AK042652|Jrk|16469|jerky	AK043134|Jrk|16469|jerky
mm9_v1_chr3_+_137528537_137528637	0.365576	FOXD3.p2	AK204242|H2afz|51788|H2A histone family, member Z
mm9_v1_chr15_+_96199877_96199934	0.365041	FOXD3.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr7_-_77511242_77511282	0.364768	FOXD3.p2	AK012573|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK012322|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr8_+_73051625_73051647	0.364724	FOXD3.p2	AK170993|Fkbp8|14232|FK506 binding protein 8	NM_001111066|Fkbp8|14232|FK506 binding protein 8	NM_010223|Fkbp8|14232|FK506 binding protein 8	AK152198|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr1_-_18255160_18255218	0.364476	FOXD3.p2	DQ012028|Gm15386|654464|predicted gene 15386	NM_001040027|Gm15386|654464|predicted gene 15386	AK020304|Defb41|77673|defensin beta 41	DQ012027|Defb41|77673|defensin beta 41	NM_183124|Defb41|77673|defensin beta 41
mm9_v1_chr14_+_49686169_49686492	0.36387	FOXD3.p2	BC023094|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	NM_144535|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK028927|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK041400|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK154166|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK016540|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK051372|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK036465|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK030928|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK036454|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK042544|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK170232|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK164148|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing	AK211895|Mudeng|74385|MU-2/AP1M2 domain containing, death-inducing
mm9_v1_chr5_-_137510950_137511054	0.363229	FOXD3.p2	AK192071|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr7_+_135409196_135409210	0.362873	FOXD3.p2	AK128900|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2	AY033886|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2	BC022226|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2	NM_133254|Slc5a2|246787|solute carrier family 5 (sodium/glucose cotransporter), member 2
mm9_v1_chr5_+_23899973_23899973	0.362738	FOXD3.p2	BC015301|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	NM_029020|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm9_v1_chr9_+_107479247_107479317	0.362443	FOXD3.p2	AK028942|Hyal1|15586|hyaluronoglucosaminidase 1	NM_008317|Hyal1|15586|hyaluronoglucosaminidase 1	BC021636|Hyal1|15586|hyaluronoglucosaminidase 1	AF011567|Hyal1|15586|hyaluronoglucosaminidase 1
mm9_v1_chr2_-_17652669_17652710	0.362437	FOXD3.p2	BC025863|Nebl|74103|nebulette	AK036214|Nebl|74103|nebulette	AK004645|Nebl|74103|nebulette	NM_028757|Nebl|74103|nebulette
mm9_v1_chr13_+_99124196_99124209	0.362158	FOXD3.p2	AK164408|Foxd1|15229|forkhead box D1	AK142034|Foxd1|15229|forkhead box D1	AK132390|Foxd1|15229|forkhead box D1	AK142838|Foxd1|15229|forkhead box D1	NM_008242|Foxd1|15229|forkhead box D1	L38607|Foxd1|15229|forkhead box D1
mm9_v1_chrX_-_35022192_35022192	0.361775	FOXD3.p2	AJ972670|Rhox4f|636177|reproductive homeobox 4F	NM_001039696|Rhox4f|636177|reproductive homeobox 4F
mm9_v1_chr15_+_3220994_3220998	0.361625	FOXD3.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr13_-_27605067_27605083	0.36084	FOXD3.p2	AF230921|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AF230922|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AF230923|Prl8a8|74188|prolactin family 8, subfamily a, member 81	BC100326|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AF466150|Prl8a8|74188|prolactin family 8, subfamily a, member 81	NM_023741|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AK167369|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AK005568|Prl8a8|74188|prolactin family 8, subfamily a, member 81
mm9_v1_chr3_+_136598184_136598389	0.359736	FOXD3.p2	AK218972|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK179617|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK145309|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr15_+_81494364_81494367	0.35871	FOXD3.p2	AK132012|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK156236|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	NM_145993|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK036510|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr18_+_77168765_77168895	0.358559	FOXD3.p2	NM_025409|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK004281|Ier3ip1|66191|immediate early response 3 interacting protein 1	BC021512|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007388|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007862|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK009116|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK182132|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK190140|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK210106|Ier3ip1|66191|immediate early response 3 interacting protein 1
mm9_v1_chr18_-_36925819_36925867	0.357635	FOXD3.p2	AY321066|Dnd1|213236|dead end homolog 1 (zebrafish)	AK141343|Dnd1|213236|dead end homolog 1 (zebrafish)	BC034897|Dnd1|213236|dead end homolog 1 (zebrafish)	NM_173383|Dnd1|213236|dead end homolog 1 (zebrafish)
mm9_v1_chr8_+_87356149_87356307	0.35725	FOXD3.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr11_+_58144207_58144291	0.356568	FOXD3.p2	AK156171|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK159202|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK172333|Sh3bp5l|79566|SH3 binding domain protein 5 like	NM_001161338|Sh3bp5l|79566|SH3 binding domain protein 5 like	NM_024480|Sh3bp5l|79566|SH3 binding domain protein 5 like	BC094418|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK166491|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK144928|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK086088|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK150129|Sh3bp5l|79566|SH3 binding domain protein 5 like	AK167203|Sh3bp5l|79566|SH3 binding domain protein 5 like
mm9_v1_chr5_-_38215607_38215829	0.356489	FOXD3.p2	AF308572|Msx1|17701|homeobox, msh-like 1	X14759|Msx1|17701|homeobox, msh-like 1	X59251|Msx1|17701|homeobox, msh-like 1	BC016426|Msx1|17701|homeobox, msh-like 1	AK077524|Msx1|17701|homeobox, msh-like 1	AK145726|Msx1|17701|homeobox, msh-like 1	AK078600|Msx1|17701|homeobox, msh-like 1	NM_010835|Msx1|17701|homeobox, msh-like 1
mm9_v1_chr4_-_126991216_126991282	0.355507	FOXD3.p2	BC056613|Gja4|14612|gap junction protein, alpha 4	AF216832|Gja4|14612|gap junction protein, alpha 4	NM_008120|Gja4|14612|gap junction protein, alpha 4	AK143024|Gja4|14612|gap junction protein, alpha 4
mm9_v1_chr17_+_29405841_29405930	0.355308	FOXD3.p2	BC004004|BC004004|80748|cDNA sequence BC004004	AK157037|BC004004|80748|cDNA sequence BC004004	BC058575|BC004004|80748|cDNA sequence BC004004
mm9_v1_chr9_+_61220162_61220251	0.354975	FOXD3.p2	NM_001083927|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_001083928|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_009389|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm9_v1_chr2_+_80171439_80171527	0.354692	FOXD3.p2	AK190686|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK204346|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK206826|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	BC002207|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr13_+_113717661_113718000	0.3546	FOXD3.p2	AK087450|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK042497|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK042066|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK162443|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC020331|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC057112|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK049530|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC037686|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC082319|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BC050229|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_172594|Dhx29|218629|DEAH (Asp-Glu-Ala-His) box polypeptide 29
mm9_v1_chr6_+_121788594_121788628	0.353953	FOXD3.p2	AK144255|Mug1|17836|murinoglobulin 1	AK149376|Mug1|17836|murinoglobulin 1	AK144541|Mug1|17836|murinoglobulin 1	BC036299|Mug1|17836|murinoglobulin 1	M65736|Mug1|17836|murinoglobulin 1
mm9_v1_chr16_+_13265171_13265171	0.353331	FOXD3.p2	BC028459|Mkl2|239719|MKL/myocardin-like 2	NM_181860|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr8_-_108224992_108225001	0.352036	FOXD3.p2	NM_001012638|Acd|497652|adrenocortical dysplasia	AK170606|Acd|497652|adrenocortical dysplasia
mm9_v1_chr5_+_148081701_148081706	0.351981	FOXD3.p2	AK020261|Pdx1|18609|pancreatic and duodenal homeobox 1	BC103572|Pdx1|18609|pancreatic and duodenal homeobox 1	BC103581|Pdx1|18609|pancreatic and duodenal homeobox 1	BC103582|Pdx1|18609|pancreatic and duodenal homeobox 1	BC105642|Pdx1|18609|pancreatic and duodenal homeobox 1	NM_008814|Pdx1|18609|pancreatic and duodenal homeobox 1
mm9_v1_chr4_-_147525932_147526290	0.350326	FOXD3.p2	AF176526|Fbxo6|50762|F-box protein 6	AK144715|Fbxo6|50762|F-box protein 6	AK150612|Fbxo6|50762|F-box protein 6	AK165867|Fbxo6|50762|F-box protein 6	NM_001163704|Fbxo6|50762|F-box protein 6	NM_001163705|Fbxo6|50762|F-box protein 6	NM_015797|Fbxo6|50762|F-box protein 6	AK002840|Fbxo6|50762|F-box protein 6	AK170743|Fbxo6|50762|F-box protein 6	AK171483|Fbxo6|50762|F-box protein 6	NM_001163706|Fbxo6|50762|F-box protein 6	NM_001163707|Fbxo6|50762|F-box protein 6
mm9_v1_chr3_-_87689483_87689550	0.350089	FOXD3.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr9_+_50302624_50302649	0.349736	FOXD3.p2	AK005558|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AY364436|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	NM_029639|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AK002767|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC017624|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC022950|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene
mm9_v1_chr5_+_144090975_144090986	0.349671	FOXD3.p2	AK002861|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK009603|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK144491|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene
mm9_v1_chr15_-_83000931_83000939	0.348787	FOXD3.p2	AK010858|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr12_+_56499902_56499913	0.348614	FOXD3.p2	AF060087|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr5_+_29761203_29761262	0.348103	FOXD3.p2	AK148406|Nom1|433864|nucleolar protein with MIF4G domain 1	NM_001033457|Nom1|433864|nucleolar protein with MIF4G domain 1
mm9_v1_chr8_-_114516147_114516201	0.347429	FOXD3.p2	BC019976|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK039699|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK161044|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK035614|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK082399|Adat1|30947|adenosine deaminase, tRNA-specific 1	NM_013925|Adat1|30947|adenosine deaminase, tRNA-specific 1
mm9_v1_chr6_+_72253241_72253241	0.347428	FOXD3.p2	NM_147779|Sftpb|20388|surfactant associated protein B
mm9_v1_chr4_+_154243693_154243744	0.346038	FOXD3.p2	AF176569|Mmel1|27390|membrane metallo-endopeptidase-like 1	NM_013783|Mmel1|27390|membrane metallo-endopeptidase-like 1	AF157105|Mmel1|27390|membrane metallo-endopeptidase-like 1
mm9_v1_chrX_+_154137114_154137143	0.345706	FOXD3.p2	BC051197|Smpx|66106|small muscle protein, X-linked	BC061051|Smpx|66106|small muscle protein, X-linked
mm9_v1_chr3_-_144695718_144695741	0.345623	FOXD3.p2	BC028343|Clca3|23844|chloride channel calcium activated 3	AB017156|Clca3|23844|chloride channel calcium activated 3	BC116318|Clca3|23844|chloride channel calcium activated 3	BC116319|Clca3|23844|chloride channel calcium activated 3	AK007466|Clca3|23844|chloride channel calcium activated 3	AK008659|Clca3|23844|chloride channel calcium activated 3	AK136476|Clca3|23844|chloride channel calcium activated 3	AK033560|Clca3|23844|chloride channel calcium activated 3	NM_017474|Clca3|23844|chloride channel calcium activated 3
mm9_v1_chr10_-_43260744_43260803	0.345259	FOXD3.p2	AK008795|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK163304|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	BC013506|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK006199|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	NM_026411|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK007370|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene
mm9_v1_chr11_+_120459840_120459845	0.343158	FOXD3.p2	NM_001038230|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr1_-_63260782_63260782	0.342586	FOXD3.p2	BC032934|Gpr1|241070|G protein-coupled receptor 1	NM_146250|Gpr1|241070|G protein-coupled receptor 1
mm9_v1_chr2_-_9981155_9981246	0.342552	FOXD3.p2	AK187037|Atp5c1|11949|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
mm9_v1_chr8_+_47637408_47637440	0.341868	FOXD3.p2	BC094675|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	AK006479|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	AK050386|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	BC117784|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	BC117785|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	NM_027973|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	AK081703|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein	AY366362|Mlf1ip|71876|myeloid leukemia factor 1 interacting protein
mm9_v1_chr3_-_98697132_98697169	0.339864	FOXD3.p2	AK078908|Hao2|56185|hydroxyacid oxidase 2	AK018684|Hao2|56185|hydroxyacid oxidase 2	AK143991|Hao2|56185|hydroxyacid oxidase 2	AF272947|Hao2|56185|hydroxyacid oxidase 2	NM_019545|Hao2|56185|hydroxyacid oxidase 2
mm9_v1_chr18_-_35374663_35374683	0.33932	FOXD3.p2	AK122278|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK036155|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK044705|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	AK046774|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2	NM_178005|Lrrtm2|107065|leucine rich repeat transmembrane neuronal 2
mm9_v1_chr15_+_81494368_81494374	0.338746	FOXD3.p2	AK029115|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr7_-_132635008_132635055	0.338047	FOXD3.p2	BC031848|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	BC049558|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	NM_026330|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr2_+_80479420_80479420	0.337465	FOXD3.p2	NM_001190179|Nup35|69482|nucleoporin 35
mm9_v1_chr17_-_45704908_45704999	0.334928	FOXD3.p2	
mm9_v1_chr7_+_148127289_148127427	0.334912	FOXD3.p2	AK171694|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)
mm9_v1_chr1_-_18127131_18127131	0.333835	FOXD3.p2	AY705449|Crisp4|78081|cysteine-rich secretory protein 4	NM_030033|Crisp4|78081|cysteine-rich secretory protein 4
mm9_v1_chr18_+_23962468_23962588	0.333785	FOXD3.p2	NM_153058|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK038562|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK140595|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK040767|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045904|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148954|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046221|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC027056|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC035254|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC025804|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK050527|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK148480|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK046095|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK088734|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	BC028987|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2	AK045493|Mapre2|212307|microtubule-associated protein, RP/EB family, member 2
mm9_v1_chr6_-_135068260_135068300	0.333784	FOXD3.p2	BC119192|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	BC119194|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	AK137739|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	AF218809|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D	NM_053118|Gprc5d|93746|G protein-coupled receptor, family C, group 5, member D
mm9_v1_chr1_-_72330767_72330887	0.333762	FOXD3.p2	AF232011|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	BC013530|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AF242204|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK090327|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK135714|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK162100|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	AK010260|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase	NM_023523|Pecr|111175|peroxisomal trans-2-enoyl-CoA reductase
mm9_v1_chr2_-_26923387_26923387	0.332353	FOXD3.p2	NM_001159602|Tmem8c|66139|transmembrane protein 8C
mm9_v1_chr15_-_91022198_91022269	0.331941	FOXD3.p2	AK082588|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	AK051445|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	Z48670|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2	NM_011994|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr17_+_56904162_56904228	0.331628	FOXD3.p2	NM_144858|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)	AK166183|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)	AY040840|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)	BC052481|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)	BC053941|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)	BC054069|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)
mm9_v1_chrX_-_7258190_7258376	0.33143	FOXD3.p2	BC099459|Magix|54634|MAGI family member, X-linked	NM_018832|Magix|54634|MAGI family member, X-linked	AK158091|Magix|54634|MAGI family member, X-linked	AK077898|Magix|54634|MAGI family member, X-linked
mm9_v1_chr19_+_53214934_53215104	0.331351	FOXD3.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr1_-_36300951_36301026	0.330818	FOXD3.p2	AK087883|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK144381|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr14_+_63752151_63752250	0.330686	FOXD3.p2	M14222|Ctsb|13030|cathepsin B	AK190209|Ctsb|13030|cathepsin B	AK190539|Ctsb|13030|cathepsin B	AK191055|Ctsb|13030|cathepsin B	AK191391|Ctsb|13030|cathepsin B	AK196955|Ctsb|13030|cathepsin B	AK198213|Ctsb|13030|cathepsin B	AK199268|Ctsb|13030|cathepsin B	AK201893|Ctsb|13030|cathepsin B	AK202291|Ctsb|13030|cathepsin B	AK203639|Ctsb|13030|cathepsin B
mm9_v1_chr16_-_21333381_21333436	0.330589	FOXD3.p2	AK018285|Magef1|76222|melanoma antigen family F, 1
mm9_v1_chr3_-_82853711_82853734	0.328961	FOXD3.p2	BC031715|Fgb|110135|fibrinogen beta chain	NM_181849|Fgb|110135|fibrinogen beta chain	AK168626|Fgb|110135|fibrinogen beta chain	AK011920|Fgb|110135|fibrinogen beta chain	AK011118|Fgb|110135|fibrinogen beta chain	AK146960|Fgb|110135|fibrinogen beta chain
mm9_v1_chr11_+_86497546_86497594	0.328501	FOXD3.p2	AK086996|Ptrh2|217057|peptidyl-tRNA hydrolase 2	AK031620|Ptrh2|217057|peptidyl-tRNA hydrolase 2	NM_001098810|Ptrh2|217057|peptidyl-tRNA hydrolase 2
mm9_v1_chr6_+_142246944_142246973	0.328337	FOXD3.p2	NM_010491|Iapp|15874|islet amyloid polypeptide	BC027527|Iapp|15874|islet amyloid polypeptide
mm9_v1_chr2_-_162915336_162915336	0.327637	FOXD3.p2	AK019131|Gtsf1l|68236|gametocyte specific factor 1-like	NM_026630|Gtsf1l|68236|gametocyte specific factor 1-like
mm9_v1_chr17_-_35268696_35268782	0.32591	FOXD3.p2	AF207820|Apom|55938|apolipoprotein M	NM_018816|Apom|55938|apolipoprotein M	BC021597|Apom|55938|apolipoprotein M	AK004530|Apom|55938|apolipoprotein M
mm9_v1_chr13_-_47138492_47138553	0.325394	FOXD3.p2	AK002335|Tpmt|22017|thiopurine methyltransferase	AF037043|Tpmt|22017|thiopurine methyltransferase	AK019205|Tpmt|22017|thiopurine methyltransferase
mm9_v1_chr6_-_42274556_42274690	0.324731	FOXD3.p2	AK163654|Fam131b|76156|family with sequence similarity 131, member B	AK047763|Fam131b|76156|family with sequence similarity 131, member B	AK018206|Fam131b|76156|family with sequence similarity 131, member B	AK018325|Fam131b|76156|family with sequence similarity 131, member B	AK158869|Fam131b|76156|family with sequence similarity 131, member B	NM_001113327|Fam131b|76156|family with sequence similarity 131, member B	NM_029528|Fam131b|76156|family with sequence similarity 131, member B
mm9_v1_chr16_+_94914273_94914275	0.324298	FOXD3.p2	AK165966|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	AK163136|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr9_+_57535734_57535814	0.323926	FOXD3.p2	AK005000|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	NM_009992|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	BC125440|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	BC125444|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1
mm9_v1_chr18_-_6516073_6516084	0.32272	FOXD3.p2	AK148194|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	AF079765|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)	NM_007935|Epc1|13831|enhancer of polycomb homolog 1 (Drosophila)
mm9_v1_chr4_-_117564594_117564651	0.321048	FOXD3.p2	BC031124|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK018638|Dph2|67728|DPH2 homolog (S. cerevisiae)	NM_026344|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK011199|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK051026|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK080747|Dph2|67728|DPH2 homolog (S. cerevisiae)	BC014746|Dph2|67728|DPH2 homolog (S. cerevisiae)
mm9_v1_chr3_+_102847115_102847128	0.320867	FOXD3.p2	BC029058|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr16_+_90738690_90738714	0.320863	FOXD3.p2	AK158113|Mrap|77037|melanocortin 2 receptor accessory protein	BC027543|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chrX_+_50144260_50144428	0.320214	FOXD3.p2	AK134708|Ccdc160|434778|coiled-coil domain containing 160	NM_001034059|Ccdc160|434778|coiled-coil domain containing 160	BC138946|Ccdc160|434778|coiled-coil domain containing 160	BC138947|Ccdc160|434778|coiled-coil domain containing 160
mm9_v1_chr6_+_60894310_60894310	0.3202	FOXD3.p2	NM_001163507|Mmrn1|70945|multimerin 1	NM_027613|Mmrn1|70945|multimerin 1
mm9_v1_chr2_-_90744808_90744892	0.320177	FOXD3.p2	AK160888|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC027270|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119267|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119269|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK002501|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK088337|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	NM_026688|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3
mm9_v1_chr13_+_46513668_46513668	0.319361	FOXD3.p2	NM_001081425|Rbm24|666794|RNA binding motif protein 24
mm9_v1_chr16_-_29541568_29541568	0.319337	FOXD3.p2	BC048410|Atp13a4|224079|ATPase type 13A4	NM_001164612|Atp13a4|224079|ATPase type 13A4	NM_172613|Atp13a4|224079|ATPase type 13A4
mm9_v1_chr19_+_6984187_6984287	0.318869	FOXD3.p2	BC087959|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_001166370|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_026306|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC016191|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr2_-_32279522_32279542	0.318785	FOXD3.p2	BC022114|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	BC019978|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr19_-_10752469_10752560	0.318363	FOXD3.p2	AF240776|Pga5|58803|pepsinogen 5, group I	AK004109|Pga5|58803|pepsinogen 5, group I	AK168924|Pga5|58803|pepsinogen 5, group I	BC119523|Pga5|58803|pepsinogen 5, group I	AK053965|Pga5|58803|pepsinogen 5, group I	NM_021453|Pga5|58803|pepsinogen 5, group I
mm9_v1_chrX_-_103416496_103416496	0.317623	FOXD3.p2	AK131710|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001167988|Taf9b|407786|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr3_-_62409061_62409061	0.317584	FOXD3.p2	AK136826|Gpr149|229357|G protein-coupled receptor 149	NM_177346|Gpr149|229357|G protein-coupled receptor 149
mm9_v1_chr3_+_51299153_51299205	0.317441	FOXD3.p2	
mm9_v1_chr10_-_63552994_63553028	0.31733	FOXD3.p2	AK036366|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK163753|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035773|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035858|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035882|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	NM_178678|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK032485|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK036180|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3
mm9_v1_chr1_+_75139300_75139429	0.316873	FOXD3.p2	AK034667|Fam134a|227298|family with sequence similarity 134, member A	NM_170755|Fam134a|227298|family with sequence similarity 134, member A	AK172093|Fam134a|227298|family with sequence similarity 134, member A	BC070406|Fam134a|227298|family with sequence similarity 134, member A	AK165957|Fam134a|227298|family with sequence similarity 134, member A	AK160400|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chr11_-_68825972_68825998	0.316306	FOXD3.p2	
mm9_v1_chr3_+_92189606_92189634	0.315137	FOXD3.p2	AY158992|Sprr2h|20762|small proline-rich protein 2H	NM_011474|Sprr2h|20762|small proline-rich protein 2H	BC099889|Sprr2h|20762|small proline-rich protein 2H	BC127024|Sprr2h|20762|small proline-rich protein 2H	AJ005566|Sprr2h|20762|small proline-rich protein 2H
mm9_v1_chr10_-_29255606_29255672	0.314743	FOXD3.p2	BC103794|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK076308|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK013366|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AB055811|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK133916|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	NM_028351|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)
mm9_v1_chr9_-_90009416_90009657	0.313636	FOXD3.p2	AK167079|Morf4l1|21761|mortality factor 4 like 1	AK164251|Morf4l1|21761|mortality factor 4 like 1	AK010528|Morf4l1|21761|mortality factor 4 like 1	AK011441|Morf4l1|21761|mortality factor 4 like 1	AK182816|Morf4l1|21761|mortality factor 4 like 1	AK218718|Morf4l1|21761|mortality factor 4 like 1	BC083094|Morf4l1|21761|mortality factor 4 like 1	AK152119|Morf4l1|21761|mortality factor 4 like 1	AK168585|Morf4l1|21761|mortality factor 4 like 1	AK168608|Morf4l1|21761|mortality factor 4 like 1	AK150925|Morf4l1|21761|mortality factor 4 like 1	AK220441|Morf4l1|21761|mortality factor 4 like 1	AK146210|Morf4l1|21761|mortality factor 4 like 1	AK168327|Morf4l1|21761|mortality factor 4 like 1	AK169065|Morf4l1|21761|mortality factor 4 like 1	AK168674|Morf4l1|21761|mortality factor 4 like 1	AB042241|Morf4l1|21761|mortality factor 4 like 1	AF319620|Morf4l1|21761|mortality factor 4 like 1	AF319621|Morf4l1|21761|mortality factor 4 like 1	BC085103|Morf4l1|21761|mortality factor 4 like 1	BC003894|Morf4l1|21761|mortality factor 4 like 1	BC017619|Morf4l1|21761|mortality factor 4 like 1	BC083118|Morf4l1|21761|mortality factor 4 like 1	BC092293|Morf4l1|21761|mortality factor 4 like 1	BC103783|Morf4l1|21761|mortality factor 4 like 1	AK011249|Morf4l1|21761|mortality factor 4 like 1	AK016414|Morf4l1|21761|mortality factor 4 like 1	NM_001039147|Morf4l1|21761|mortality factor 4 like 1	NM_024431|Morf4l1|21761|mortality factor 4 like 1
mm9_v1_chr13_-_35085948_35086012	0.3133	FOXD3.p2	AF153613|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK170778|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK009478|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_011868|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_001110331|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_001110332|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
mm9_v1_chr1_+_153602492_153602592	0.313283	FOXD3.p2	AB188342|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	NM_001039644|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	AK141326|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	AK143252|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC138658|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC138659|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC145357|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3	BC145358|Edem3|66967|ER degradation enhancer, mannosidase alpha-like 3
mm9_v1_chr5_-_121641282_121641449	0.312825	FOXD3.p2	D84372|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC057398|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC028513|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK011468|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK147354|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC059278|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159501|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159587|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_001109992|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_011202|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11
mm9_v1_chr14_+_55045740_55045780	0.311927	FOXD3.p2	AK004194|Mrpl52|68836|mitochondrial ribosomal protein L52	NM_026851|Mrpl52|68836|mitochondrial ribosomal protein L52	AK150806|Mrpl52|68836|mitochondrial ribosomal protein L52	AK151615|Mrpl52|68836|mitochondrial ribosomal protein L52	AK164629|Mrpl52|68836|mitochondrial ribosomal protein L52	AK081551|Mrpl52|68836|mitochondrial ribosomal protein L52	BC028522|Mrpl52|68836|mitochondrial ribosomal protein L52	AK152876|Mrpl52|68836|mitochondrial ribosomal protein L52
mm9_v1_chr10_-_112363848_112364044	0.31177	FOXD3.p2	AK078766|Atxn7l3b|382423|ataxin 7-like 3B	AK051537|Atxn7l3b|382423|ataxin 7-like 3B
mm9_v1_chr2_+_110561733_110561771	0.311715	FOXD3.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr3_-_73512328_73512336	0.311714	FOXD3.p2	AK050337|Bche|12038|butyrylcholinesterase	NM_009738|Bche|12038|butyrylcholinesterase
mm9_v1_chr8_-_28313004_28313018	0.311422	FOXD3.p2	AK006984|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1	BC052754|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1	NM_029674|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1
mm9_v1_chr18_-_6241456_6241485	0.311118	FOXD3.p2	BC013248|Kif5b|16573|kinesin family member 5B
mm9_v1_chr17_+_46298055_46298112	0.311039	FOXD3.p2	AK148020|Gtpbp2|56055|GTP binding protein 2	AK087511|Gtpbp2|56055|GTP binding protein 2	AF168991|Gtpbp2|56055|GTP binding protein 2	AK008731|Gtpbp2|56055|GTP binding protein 2
mm9_v1_chr4_+_49644923_49645030	0.310499	FOXD3.p2	NM_001163263|Rnf20|109331|ring finger protein 20	NM_182999|Rnf20|109331|ring finger protein 20	AK053783|Rnf20|109331|ring finger protein 20	AK085436|Rnf20|109331|ring finger protein 20	AK139883|Rnf20|109331|ring finger protein 20	AK048862|Rnf20|109331|ring finger protein 20	AK051278|Rnf20|109331|ring finger protein 20	BC052482|Rnf20|109331|ring finger protein 20	AK087860|Rnf20|109331|ring finger protein 20	AK220492|Rnf20|109331|ring finger protein 20	AK082529|Rnf20|109331|ring finger protein 20
mm9_v1_chr15_-_89307854_89307854	0.309065	FOXD3.p2	BC098075|Arsa|11883|arylsulfatase A	NM_009713|Arsa|11883|arylsulfatase A
mm9_v1_chr9_-_103595136_103595138	0.308488	FOXD3.p2	AK132350|Tmem108|81907|transmembrane protein 108
mm9_v1_chr5_-_137463376_137463426	0.308361	FOXD3.p2	AK012199|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr1_-_13364092_13364163	0.308074	FOXD3.p2	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chrX_+_35953741_35953908	0.307788	FOXD3.p2	AK087975|Mcts1|68995|malignant T cell amplified sequence 1	AK005292|Mcts1|68995|malignant T cell amplified sequence 1	NM_026902|Mcts1|68995|malignant T cell amplified sequence 1	BC010486|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr1_+_57831651_57831771	0.306992	FOXD3.p2	NM_144882|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK012791|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK019292|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK161988|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK031266|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	BC021879|Spats2l|67198|spermatogenesis associated, serine-rich 2-like	AK032169|Spats2l|67198|spermatogenesis associated, serine-rich 2-like
mm9_v1_chr17_+_17511271_17511295	0.306961	FOXD3.p2	BC080771|Riok2|67045|RIO kinase 2 (yeast)	NM_025934|Riok2|67045|RIO kinase 2 (yeast)
mm9_v1_chr9_+_104955563_104955826	0.305773	FOXD3.p2	AK008592|Mrpl3|94062|mitochondrial ribosomal protein L3	AK145687|Mrpl3|94062|mitochondrial ribosomal protein L3	AK169272|Mrpl3|94062|mitochondrial ribosomal protein L3	NM_053159|Mrpl3|94062|mitochondrial ribosomal protein L3	AK077857|Mrpl3|94062|mitochondrial ribosomal protein L3	AK002509|Mrpl3|94062|mitochondrial ribosomal protein L3	BC011128|Mrpl3|94062|mitochondrial ribosomal protein L3	BC016586|Mrpl3|94062|mitochondrial ribosomal protein L3	BC034877|Mrpl3|94062|mitochondrial ribosomal protein L3	AB049633|Mrpl3|94062|mitochondrial ribosomal protein L3	AK217246|Mrpl3|94062|mitochondrial ribosomal protein L3
mm9_v1_chr9_+_99370839_99370876	0.305675	FOXD3.p2	BC068205|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene	AK005560|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene
mm9_v1_chr15_+_81494375_81494386	0.305055	FOXD3.p2	AK145560|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237000|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237001|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AY237002|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr11_-_57981970_57982020	0.303101	FOXD3.p2	AK049216|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC137802|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144921|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144922|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK143536|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK131137|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr7_-_4796261_4796301	0.303018	FOXD3.p2	NM_172737|Shisa7|232813|shisa homolog 7 (Xenopus laevis)
mm9_v1_chr7_-_146037857_146037999	0.30267	FOXD3.p2	AK009250|Mapk1ip1|69546|mitogen-activated protein kinase 1 interacting protein 1	BC048375|Mapk1ip1|69546|mitogen-activated protein kinase 1 interacting protein 1	NM_001045483|Mapk1ip1|69546|mitogen-activated protein kinase 1 interacting protein 1	NM_027115|Mapk1ip1|69546|mitogen-activated protein kinase 1 interacting protein 1	BC055699|Mapk1ip1|69546|mitogen-activated protein kinase 1 interacting protein 1
mm9_v1_chr4_-_141567551_141567551	0.301409	FOXD3.p2	NM_177868|Fhad1|329977|forkhead-associated (FHA) phosphopeptide binding domain 1
mm9_v1_chr18_+_53405363_53405427	0.301002	FOXD3.p2	AK012711|Snx24|69226|sorting nexing 24	AK017610|Snx24|69226|sorting nexing 24
mm9_v1_chr2_+_172073991_172073998	0.300977	FOXD3.p2	AK038677|Mc3r|17201|melanocortin 3 receptor	NM_008561|Mc3r|17201|melanocortin 3 receptor	BC103669|Mc3r|17201|melanocortin 3 receptor	BC104730|Mc3r|17201|melanocortin 3 receptor	BC105667|Mc3r|17201|melanocortin 3 receptor	BC105668|Mc3r|17201|melanocortin 3 receptor
mm9_v1_chr6_+_121788537_121788560	0.29914	FOXD3.p2	BC051037|Mug1|17836|murinoglobulin 1	NM_008645|Mug1|17836|murinoglobulin 1	BC049868|Mug1|17836|murinoglobulin 1
mm9_v1_chr1_-_137481914_137481937	0.298701	FOXD3.p2	NM_173437|Nav1|215690|neuron navigator 1
mm9_v1_chr4_+_43576357_43576371	0.298631	FOXD3.p2	AK007665|Creb3|12913|cAMP responsive element binding protein 3
mm9_v1_chr11_-_88579392_88579430	0.298191	FOXD3.p2	AK051269|Msi2|76626|Musashi homolog 2 (Drosophila)	AK031365|Msi2|76626|Musashi homolog 2 (Drosophila)	AK153928|Msi2|76626|Musashi homolog 2 (Drosophila)	AK169846|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr14_+_122933560_122933681	0.29761	FOXD3.p2	AK148002|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	BC006915|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	BC049802|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	AK183916|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	AK212580|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide
mm9_v1_chrX_-_35065833_35065833	0.296564	FOXD3.p2	AJ972671|Rhox4g|664608|reproductive homeobox 4G	NM_001039698|Rhox4g|664608|reproductive homeobox 4G
mm9_v1_chr7_-_51809255_51809350	0.295634	FOXD3.p2	AK134489|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	BC066025|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	NM_009473|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK077620|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK156777|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	AK054508|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2
mm9_v1_chr11_-_96168185_96168223	0.295618	FOXD3.p2	AK002860|0610040B09Rik|75395|RIKEN cDNA 0610040B09 gene
mm9_v1_chr15_+_101904294_101904371	0.29533	FOXD3.p2	BC147746|Eif4b|75705|eukaryotic translation initiation factor 4B	BC147748|Eif4b|75705|eukaryotic translation initiation factor 4B	AK077423|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170256|Eif4b|75705|eukaryotic translation initiation factor 4B	AK148012|Eif4b|75705|eukaryotic translation initiation factor 4B	AK163266|Eif4b|75705|eukaryotic translation initiation factor 4B	AK166363|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168425|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168350|Eif4b|75705|eukaryotic translation initiation factor 4B	AK045250|Eif4b|75705|eukaryotic translation initiation factor 4B	BC036293|Eif4b|75705|eukaryotic translation initiation factor 4B	AK161693|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170354|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr13_-_58456221_58456222	0.294876	FOXD3.p2	BC116646|Kif27|75050|kinesin family member 27	NM_175214|Kif27|75050|kinesin family member 27
mm9_v1_chr5_+_138526376_138526387	0.294672	FOXD3.p2	AK028932|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr4_-_126540249_126540348	0.293613	FOXD3.p2	AK018207|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr18_+_69504145_69504185	0.293469	FOXD3.p2	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr12_-_82586025_82586042	0.293115	FOXD3.p2	BC100533|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK079975|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr14_+_55840843_55840843	0.292839	FOXD3.p2	AK017274|Dhrs2|71412|dehydrogenase/reductase member 2	NM_027790|Dhrs2|71412|dehydrogenase/reductase member 2
mm9_v1_chr7_+_23656242_23656242	0.292434	FOXD3.p2	NM_001166724|Vmn1r160|620758|vomeronasal 1 receptor 160
mm9_v1_chr10_+_97106701_97106701	0.291986	FOXD3.p2	AK005684|Epyc|13516|epiphycan	AK015223|Epyc|13516|epiphycan	NM_007884|Epyc|13516|epiphycan
mm9_v1_chr17_-_18414529_18414529	0.291883	FOXD3.p2	NM_001104543|Vmn2r94|665227|vomeronasal 2, receptor 94
mm9_v1_chr14_-_33278035_33278035	0.29135	FOXD3.p2	AK158592|Slc18a3|20508|solute carrier family 18 (vesicular monoamine), member 3	NM_021712|Slc18a3|20508|solute carrier family 18 (vesicular monoamine), member 3
mm9_v1_chr5_+_76958331_76958438	0.290191	FOXD3.p2	BC064811|Exoc1|69940|exocyst complex component 1	NM_027270|Exoc1|69940|exocyst complex component 1	AK042620|Exoc1|69940|exocyst complex component 1	AK155980|Exoc1|69940|exocyst complex component 1	BC087543|Exoc1|69940|exocyst complex component 1	BC024678|Exoc1|69940|exocyst complex component 1
mm9_v1_chr7_-_126864266_126864324	0.289232	FOXD3.p2	BC004776|Thumpd1|233802|THUMP domain containing 1	NM_145585|Thumpd1|233802|THUMP domain containing 1	AK084107|Thumpd1|233802|THUMP domain containing 1	AK152912|Thumpd1|233802|THUMP domain containing 1	AK032078|Thumpd1|233802|THUMP domain containing 1
mm9_v1_chr7_+_22399110_22399110	0.28891	FOXD3.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_22881885_22881885	0.28891	FOXD3.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_23546715_23546715	0.28891	FOXD3.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr7_+_21556203_21556203	0.28891	FOXD3.p2	NM_001166847|Vmn1r112|100043569|vomeronasal 1 receptor 112
mm9_v1_chr2_+_174171525_174171529	0.288557	FOXD3.p2	AK187312|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK215851|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr3_+_85378033_85378116	0.286745	FOXD3.p2	AK166231|Pet112l|229487|PET112-like (yeast)	AK053978|Pet112l|229487|PET112-like (yeast)	AK081800|Pet112l|229487|PET112-like (yeast)	BC005709|Pet112l|229487|PET112-like (yeast)	AK034702|Pet112l|229487|PET112-like (yeast)	NM_144896|Pet112l|229487|PET112-like (yeast)	AK028193|Pet112l|229487|PET112-like (yeast)	AK134831|Pet112l|229487|PET112-like (yeast)
mm9_v1_chr12_-_91976586_91976877	0.286573	FOXD3.p2	AK032038|Dio2|13371|deiodinase, iodothyronine, type II	AK045607|Dio2|13371|deiodinase, iodothyronine, type II	AF177196|Dio2|13371|deiodinase, iodothyronine, type II	AF177197|Dio2|13371|deiodinase, iodothyronine, type II	AF093137|Dio2|13371|deiodinase, iodothyronine, type II	BC125383|Dio2|13371|deiodinase, iodothyronine, type II	BC125385|Dio2|13371|deiodinase, iodothyronine, type II	AF096875|Dio2|13371|deiodinase, iodothyronine, type II	NM_010050|Dio2|13371|deiodinase, iodothyronine, type II
mm9_v1_chr12_+_4850202_4850209	0.285779	FOXD3.p2	AK170427|BC068281|238037|cDNA sequence BC068281
mm9_v1_chr1_+_187311172_187311232	0.285375	FOXD3.p2	AK017151|5033404E19Rik|114668|RIKEN cDNA 5033404E19 gene
mm9_v1_chr1_-_184397778_184397904	0.285082	FOXD3.p2	AK192389|Capn2|12334|calpain 2	AK203804|Capn2|12334|calpain 2	AK198770|Capn2|12334|calpain 2	AK203361|Capn2|12334|calpain 2
mm9_v1_chr1_-_122017590_122017672	0.2836	FOXD3.p2	X61431|Dbi|13167|diazepam binding inhibitor	AK008540|Dbi|13167|diazepam binding inhibitor	AK008576|Dbi|13167|diazepam binding inhibitor	AK018720|Dbi|13167|diazepam binding inhibitor	AK027906|Dbi|13167|diazepam binding inhibitor	AK145278|Dbi|13167|diazepam binding inhibitor	AK148753|Dbi|13167|diazepam binding inhibitor	AK020692|Dbi|13167|diazepam binding inhibitor	AK078428|Dbi|13167|diazepam binding inhibitor	NM_007830|Dbi|13167|diazepam binding inhibitor
mm9_v1_chr15_+_74551611_74551685	0.283154	FOXD3.p2	BC047266|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene	NM_198607|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr6_-_85712469_85712473	0.282869	FOXD3.p2	BC092089|Cml3|93674|camello-like 3	AF163316|Cml3|93674|camello-like 3	NM_053097|Cml3|93674|camello-like 3
mm9_v1_chr5_-_121062483_121062618	0.281331	FOXD3.p2	BC021365|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene	AK003581|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene	NM_029096|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene	NM_133908|1110008J03Rik|100764|RIKEN cDNA 1110008J03 gene
mm9_v1_chr11_+_77590766_77590794	0.281122	FOXD3.p2	AB026497|Myo18a|360013|myosin XVIIIA	NM_011586|Myo18a|360013|myosin XVIIIA	BC138366|Myo18a|360013|myosin XVIIIA	BC145257|Myo18a|360013|myosin XVIIIA
mm9_v1_chr10_+_93977597_93977699	0.280671	FOXD3.p2	NM_172051|Tmcc3|319880|transmembrane and coiled coil domains 3	AK132545|Tmcc3|319880|transmembrane and coiled coil domains 3	BC095951|Tmcc3|319880|transmembrane and coiled coil domains 3	AK083129|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr3_-_92822980_92822984	0.280584	FOXD3.p2	AK003825|Lce1m|66203|late cornified envelope 1M	AK019517|Lce1m|66203|late cornified envelope 1M	AK004318|Lce1m|66203|late cornified envelope 1M	BC109181|Lce1m|66203|late cornified envelope 1M	BC109182|Lce1m|66203|late cornified envelope 1M	NM_025420|Lce1m|66203|late cornified envelope 1M
mm9_v1_chr17_-_87665228_87665308	0.280188	FOXD3.p2	AK077139|Mcfd2|193813|multiple coagulation factor deficiency 2	AK141599|Mcfd2|193813|multiple coagulation factor deficiency 2	AF475283|Mcfd2|193813|multiple coagulation factor deficiency 2	AK151803|Mcfd2|193813|multiple coagulation factor deficiency 2	NM_139295|Mcfd2|193813|multiple coagulation factor deficiency 2	NM_176808|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr13_-_120197722_120197851	0.280102	FOXD3.p2	AK050478|Nnt|18115|nicotinamide nucleotide transhydrogenase	Z49204|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK052061|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK033282|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK040460|Nnt|18115|nicotinamide nucleotide transhydrogenase	BC008518|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK129006|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK084546|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK084604|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK087064|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK088044|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK159694|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK052234|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK054332|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK083413|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK085903|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK168736|Nnt|18115|nicotinamide nucleotide transhydrogenase	AK090115|Nnt|18115|nicotinamide nucleotide transhydrogenase	NM_008710|Nnt|18115|nicotinamide nucleotide transhydrogenase
mm9_v1_chr10_+_86148239_86148360	0.27991	FOXD3.p2	AK019015|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK007490|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK017634|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK012122|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK090016|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene
mm9_v1_chr11_+_117643971_117643971	0.279327	FOXD3.p2	AK143862|Tmc8|217356|transmembrane channel-like gene family 8	NM_001195088|Tmc8|217356|transmembrane channel-like gene family 8
mm9_v1_chr15_+_10107168_10107535	0.278787	FOXD3.p2	AK054381|Prlr|19116|prolactin receptor	AK143335|Prlr|19116|prolactin receptor	AK050317|Prlr|19116|prolactin receptor	BC005555|Prlr|19116|prolactin receptor	BC006652|Prlr|19116|prolactin receptor	AK081676|Prlr|19116|prolactin receptor
mm9_v1_chr4_-_148500769_148500849	0.278393	FOXD3.p2	AF013253|Cort|12854|cortistatin	AK013496|Cort|12854|cortistatin	NM_007745|Cort|12854|cortistatin
mm9_v1_chr2_-_173411352_173411489	0.276636	FOXD3.p2	AK080176|Ppp4r1l-ps|100043911|protein phosphatase 4, regulatory subunit 1-like, pseudogene	AK046376|Ppp4r1l-ps|100043911|protein phosphatase 4, regulatory subunit 1-like, pseudogene
mm9_v1_chr19_+_46576203_46576224	0.276447	FOXD3.p2	BC029283|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr6_+_49023793_49023864	0.276234	FOXD3.p2	NM_029353|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK031878|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK153503|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK010366|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene
mm9_v1_chr13_-_35085906_35085940	0.275687	FOXD3.p2	BC001983|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK182614|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
mm9_v1_chr8_+_107607652_107607676	0.275673	FOXD3.p2	NM_001159415|Ces3b|13909|carboxylesterase 3B	NM_144511|Ces3b|13909|carboxylesterase 3B	BC019147|Ces3b|13909|carboxylesterase 3B	BC010812|Ces3b|13909|carboxylesterase 3B	BC019926|Ces3b|13909|carboxylesterase 3B
mm9_v1_chr8_-_26864721_26864754	0.275147	FOXD3.p2	AK008529|Ddhd2|72108|DDHD domain containing 2	AK196094|Ddhd2|72108|DDHD domain containing 2	NM_028102|Ddhd2|72108|DDHD domain containing 2	AK039979|Ddhd2|72108|DDHD domain containing 2
mm9_v1_chr7_+_51392136_51392136	0.273748	FOXD3.p2	J03877|Klk1b16|16615|kallikrein 1-related peptidase b16	NM_008454|Klk1b16|16615|kallikrein 1-related peptidase b16
mm9_v1_chr1_+_24685711_24685764	0.273429	FOXD3.p2	AK158982|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr4_-_82151590_82151637	0.272352	FOXD3.p2	Y07685|Nfib|18028|nuclear factor I/B
mm9_v1_chr7_-_86859071_86859071	0.271374	FOXD3.p2	BC141045|Kif7|16576|kinesin family member 7	BC145222|Kif7|16576|kinesin family member 7	NM_010626|Kif7|16576|kinesin family member 7
mm9_v1_chr2_+_25203630_25203665	0.271309	FOXD3.p2	BC025500|Man1b1|227619|mannosidase, alpha, class 1B, member 1
mm9_v1_chr2_+_69699618_69699738	0.270555	FOXD3.p2	NM_001110145|Ssb|20823|Sjogren syndrome antigen B	NM_009278|Ssb|20823|Sjogren syndrome antigen B	AK088650|Ssb|20823|Sjogren syndrome antigen B	AK134864|Ssb|20823|Sjogren syndrome antigen B	AK168828|Ssb|20823|Sjogren syndrome antigen B	AK032940|Ssb|20823|Sjogren syndrome antigen B	AK017822|Ssb|20823|Sjogren syndrome antigen B	AK088370|Ssb|20823|Sjogren syndrome antigen B	AK088677|Ssb|20823|Sjogren syndrome antigen B	L00993|Ssb|20823|Sjogren syndrome antigen B	Y07951|Ssb|20823|Sjogren syndrome antigen B	AK141487|Ssb|20823|Sjogren syndrome antigen B	BC003820|Ssb|20823|Sjogren syndrome antigen B	BC106150|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chr17_+_45643768_45643817	0.270505	FOXD3.p2	AK146958|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_198608|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113172|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113779|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	AK167771|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC079844|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr5_+_102910569_102910573	0.269297	FOXD3.p2	BC025502|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr7_-_35048648_35048654	0.269217	FOXD3.p2	AK129125|4931406P16Rik|233103|RIKEN cDNA 4931406P16 gene
mm9_v1_chr3_-_90017553_90017574	0.268048	FOXD3.p2	BC048352|Rps27|57294|ribosomal protein S27	BC027649|Rps27|57294|ribosomal protein S27	BC055693|Rps27|57294|ribosomal protein S27	BC037026|Rps27|57294|ribosomal protein S27	AK014294|Rps27|57294|ribosomal protein S27	AK084058|Rps27|57294|ribosomal protein S27	NM_001190258|Gm9846|100043813|predicted gene 9846	AK088320|Rps27|57294|ribosomal protein S27	AK166551|Rps27|57294|ribosomal protein S27	NM_027015|Rps27|57294|ribosomal protein S27
mm9_v1_chr8_+_74967757_74967859	0.267963	FOXD3.p2	AK133815|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	NM_028170|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	BC008558|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	AK089918|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene
mm9_v1_chr15_+_100165359_100165359	0.266772	FOXD3.p2	AB253945|Gm10035|668178|predicted gene 10035	NM_001081471|Gm10035|668178|predicted gene 10035
mm9_v1_chr19_-_21467250_21467261	0.266368	FOXD3.p2	AK080065|Gda|14544|guanine deaminase
mm9_v1_chr4_+_62141084_62141100	0.265961	FOXD3.p2	BC139079|Bspry|192120|B-box and SPRY domain containing	BC139080|Bspry|192120|B-box and SPRY domain containing	BC145535|Bspry|192120|B-box and SPRY domain containing	AK035588|Bspry|192120|B-box and SPRY domain containing	AK160930|Bspry|192120|B-box and SPRY domain containing	AJ276690|Bspry|192120|B-box and SPRY domain containing	NM_138653|Bspry|192120|B-box and SPRY domain containing
mm9_v1_chr11_-_88816679_88816773	0.265828	FOXD3.p2	AK050181|Scpep1|74617|serine carboxypeptidase 1	AK153485|Scpep1|74617|serine carboxypeptidase 1	BC021399|Scpep1|74617|serine carboxypeptidase 1	AF330052|Scpep1|74617|serine carboxypeptidase 1	AK153225|Scpep1|74617|serine carboxypeptidase 1	BC004847|Scpep1|74617|serine carboxypeptidase 1	AK014680|Scpep1|74617|serine carboxypeptidase 1	NM_029023|Scpep1|74617|serine carboxypeptidase 1
mm9_v1_chr11_-_109159357_109159494	0.264898	FOXD3.p2	BC129899|Rgs9|19739|regulator of G-protein signaling 9	BC129898|Rgs9|19739|regulator of G-protein signaling 9	AF011358|Rgs9|19739|regulator of G-protein signaling 9	AK138159|Rgs9|19739|regulator of G-protein signaling 9	AK085443|Rgs9|19739|regulator of G-protein signaling 9	AF125046|Rgs9|19739|regulator of G-protein signaling 9	AK164961|Rgs9|19739|regulator of G-protein signaling 9	NM_001165934|Rgs9|19739|regulator of G-protein signaling 9	NM_011268|Rgs9|19739|regulator of G-protein signaling 9
mm9_v1_chr11_-_86807216_86807263	0.264363	FOXD3.p2	NM_001005341|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr2_+_135485242_135485446	0.263868	FOXD3.p2	AK148001|Plcb4|18798|phospholipase C, beta 4	AK036896|Plcb4|18798|phospholipase C, beta 4	AK020944|Plcb4|18798|phospholipase C, beta 4	BC089521|Plcb4|18798|phospholipase C, beta 4
mm9_v1_chr7_-_29965419_29965499	0.263569	FOXD3.p2	BC005717|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK027973|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150982|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK167948|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159216|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK168886|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr17_+_33661120_33661188	0.263104	FOXD3.p2	BC082773|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK042525|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK046333|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK034843|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK034565|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	AK076334|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	NM_172619|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	BC056427|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	BC100558|Adamts10|224697|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
mm9_v1_chr3_+_95965959_95965978	0.262696	FOXD3.p2	BC051083|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chr14_-_73762933_73762949	0.261013	FOXD3.p2	AK002796|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr15_-_93228666_93228789	0.259634	FOXD3.p2	AK042283|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	BC058368|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012852|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	NM_026025|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK170136|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012589|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AB095989|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1
mm9_v1_chr3_-_90195440_90195485	0.259588	FOXD3.p2	
mm9_v1_chr7_-_5068497_5068512	0.25808	FOXD3.p2	AY070253|Rfpl4|192658|ret finger protein-like 4	BC069834|Rfpl4|192658|ret finger protein-like 4	AK136022|Rfpl4|192658|ret finger protein-like 4	AK139569|Rfpl4|192658|ret finger protein-like 4	NM_001145013|Rfpl4|192658|ret finger protein-like 4	NM_138954|Rfpl4|192658|ret finger protein-like 4
mm9_v1_chr6_-_115758729_115758768	0.257429	FOXD3.p2	BC046339|Rpl32|19951|ribosomal protein L32	BC030176|Rpl32|19951|ribosomal protein L32	AK002353|Rpl32|19951|ribosomal protein L32	AK011017|Rpl32|19951|ribosomal protein L32	AK012525|Rpl32|19951|ribosomal protein L32	AK028204|Rpl32|19951|ribosomal protein L32	AK146768|Rpl32|19951|ribosomal protein L32	AK148453|Rpl32|19951|ribosomal protein L32	AK150705|Rpl32|19951|ribosomal protein L32	AK168282|Rpl32|19951|ribosomal protein L32	NM_172086|Rpl32|19951|ribosomal protein L32	BC086909|Rpl32|19951|ribosomal protein L32
mm9_v1_chr11_+_101594342_101594372	0.256793	FOXD3.p2	AK170616|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chr2_-_148701108_148701112	0.256175	FOXD3.p2	AF311741|Cst3|13010|cystatin C	AF483486|Cst3|13010|cystatin C	AF483487|Cst3|13010|cystatin C
mm9_v1_chr7_+_107307748_107307807	0.255755	FOXD3.p2	AK011925|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115472|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	NM_026010|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115473|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK008917|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK013127|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)
mm9_v1_chr9_+_62225584_62225601	0.255184	FOXD3.p2	AK166489|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr3_-_95558736_95558899	0.254818	FOXD3.p2	AK187935|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164825|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK088675|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC147501|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK011540|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	BC008995|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK168075|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK142685|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK080690|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	AK164589|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163617|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163618|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_001163619|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)	NM_027931|Tars2|71807|threonyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr7_+_13097884_13097899	0.254282	FOXD3.p2	AK013837|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC099547|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	BC087883|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene	NM_028434|2900092C05Rik|73090|RIKEN cDNA 2900092C05 gene
mm9_v1_chr7_+_107376116_107376219	0.252885	FOXD3.p2	NM_027629|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK039189|Pgm2l1|70974|phosphoglucomutase 2-like 1	AK040513|Pgm2l1|70974|phosphoglucomutase 2-like 1	BC076571|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr12_-_106103285_106103341	0.252815	FOXD3.p2	AB047978|Clmn|94040|calmin	AB059643|Clmn|94040|calmin	AB059644|Clmn|94040|calmin	AB059645|Clmn|94040|calmin	AB059646|Clmn|94040|calmin	AB059647|Clmn|94040|calmin	AB059648|Clmn|94040|calmin	NM_001040682|Clmn|94040|calmin	NM_053155|Clmn|94040|calmin
mm9_v1_chrY_-_796224_796224	0.252463	FOXD3.p2	AJ307017|Usp9y|107868|ubiquitin specific peptidase 9, Y chromosome	NM_148943|Usp9y|107868|ubiquitin specific peptidase 9, Y chromosome
mm9_v1_chr2_+_124436328_124436346	0.251348	FOXD3.p2	AK084922|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AK031307|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr4_+_57580989_57581153	0.251152	FOXD3.p2	AK045344|Palm2|242481|paralemmin 2	NM_172868|Palm2|242481|paralemmin 2	BC113156|Palm2|242481|paralemmin 2
mm9_v1_chr3_-_135086338_135086446	0.251114	FOXD3.p2	AK005184|Cisd2|67006|CDGSH iron sulfur domain 2	AK003486|Cisd2|67006|CDGSH iron sulfur domain 2	AK004257|Cisd2|67006|CDGSH iron sulfur domain 2	AK046746|Cisd2|67006|CDGSH iron sulfur domain 2	AK005301|Cisd2|67006|CDGSH iron sulfur domain 2	BC058279|Cisd2|67006|CDGSH iron sulfur domain 2	NM_025902|Cisd2|67006|CDGSH iron sulfur domain 2
mm9_v1_chr11_+_95720178_95720317	0.251037	FOXD3.p2	AK014714|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene	AK133925|4833417C18Rik|73906|RIKEN cDNA 4833417C18 gene
mm9_v1_chr8_+_113557991_113558130	0.250782	FOXD3.p2	AK044451|Aars|234734|alanyl-tRNA synthetase
mm9_v1_chr8_-_72736151_72736187	0.25062	FOXD3.p2	BC025937|Slc25a42|73095|solute carrier family 25, member 42	BC036140|Slc25a42|73095|solute carrier family 25, member 42	BC022213|Slc25a42|73095|solute carrier family 25, member 42	AK165460|Slc25a42|73095|solute carrier family 25, member 42	AK049593|Slc25a42|73095|solute carrier family 25, member 42	AK143301|Slc25a42|73095|solute carrier family 25, member 42	AK165793|Slc25a42|73095|solute carrier family 25, member 42	NM_001007570|Slc25a42|73095|solute carrier family 25, member 42
mm9_v1_chr15_-_83749802_83749906	0.249267	FOXD3.p2	NM_001161629|Efcab6|77627|EF-hand calcium binding domain 6	AK016516|Efcab6|77627|EF-hand calcium binding domain 6
mm9_v1_chr7_-_29965655_29965691	0.24743	FOXD3.p2	NM_026545|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr15_+_85690136_85690174	0.247316	FOXD3.p2	AK012870|Gtse1|29870|G two S phase expressed protein 1	NM_001168672|Gtse1|29870|G two S phase expressed protein 1	AK081582|Gtse1|29870|G two S phase expressed protein 1
mm9_v1_chr8_+_131591033_131591104	0.246824	FOXD3.p2	AK005764|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_001168369|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_029292|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	AK076548|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	BC147560|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene
mm9_v1_chr19_-_27463677_27463827	0.246795	FOXD3.p2	AK004416|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr4_-_132019760_132019840	0.246308	FOXD3.p2	BC068306|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK012903|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK012886|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	NM_026039|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK159696|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)
mm9_v1_chr8_+_13171296_13171316	0.24605	FOXD3.p2	BC006785|Lamp1|16783|lysosomal-associated membrane protein 1
mm9_v1_chr13_-_58494637_58494692	0.244679	FOXD3.p2	AK207611|Hnrnpk|15387|heterogeneous nuclear ribonucleoprotein K
mm9_v1_chr6_+_133985717_133985901	0.244474	FOXD3.p2	AK155150|Etv6|14011|ets variant gene 6 (TEL oncogene)	NM_007961|Etv6|14011|ets variant gene 6 (TEL oncogene)	AK154569|Etv6|14011|ets variant gene 6 (TEL oncogene)
mm9_v1_chr10_+_20059547_20059574	0.244104	FOXD3.p2	AK169491|Bclaf1|72567|BCL2-associated transcription factor 1
mm9_v1_chr8_+_71317827_71317912	0.243411	FOXD3.p2	AK040574|Ints10|70885|integrator complex subunit 10	AK047093|Ints10|70885|integrator complex subunit 10	AK014939|Ints10|70885|integrator complex subunit 10	NM_027590|Ints10|70885|integrator complex subunit 10	AK147743|Ints10|70885|integrator complex subunit 10	AK169819|Ints10|70885|integrator complex subunit 10	AK030974|Ints10|70885|integrator complex subunit 10	BC031923|Ints10|70885|integrator complex subunit 10	AK083331|Ints10|70885|integrator complex subunit 10	AK034498|Ints10|70885|integrator complex subunit 10
mm9_v1_chrX_-_43809499_43809524	0.242458	FOXD3.p2	NM_001085510|Gm4987|245405|predicted gene 4987
mm9_v1_chrX_-_132162243_132162243	0.241516	FOXD3.p2	AK015971|Prame|75829|preferentially expressed antigen in melanoma	NM_029459|Prame|75829|preferentially expressed antigen in melanoma
mm9_v1_chr8_+_72758086_72758131	0.241385	FOXD3.p2	AK042293|Sugp2|234373|SURP and G patch domain containing 2	NM_001168290|Sugp2|234373|SURP and G patch domain containing 2	NM_172755|Sugp2|234373|SURP and G patch domain containing 2	AF518875|Sugp2|234373|SURP and G patch domain containing 2
mm9_v1_chr19_-_6984433_6984519	0.24096	FOXD3.p2	AB041573|Prdx5|54683|peroxiredoxin 5	BC008174|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr2_-_80287781_80287882	0.23985	FOXD3.p2	U91905|Frzb|20378|frizzled-related protein
mm9_v1_chr6_-_17980373_17980444	0.239495	FOXD3.p2	NM_023653|Wnt2|22413|wingless-related MMTV integration site 2
mm9_v1_chr12_+_36652206_36652279	0.239325	FOXD3.p2	BC023499|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)	NM_207531|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)	AK053177|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)
mm9_v1_chr17_-_12888210_12888210	0.239252	FOXD3.p2	AK053045|Igf2r|16004|insulin-like growth factor 2 receptor
mm9_v1_chr14_+_3740222_3740233	0.239107	FOXD3.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_6956219_6956230	0.239107	FOXD3.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_3500819_3500830	0.239107	FOXD3.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr9_-_53475610_53475616	0.238877	FOXD3.p2	AK031955|Cul5|75717|cullin 5	NM_001161618|Cul5|75717|cullin 5	NM_027807|Cul5|75717|cullin 5
mm9_v1_chr15_+_51871652_51871713	0.238496	FOXD3.p2	AK046414|Aard|239435|alanine and arginine rich domain containing protein	NM_175503|Aard|239435|alanine and arginine rich domain containing protein	BC089505|Aard|239435|alanine and arginine rich domain containing protein	AY134665|Aard|239435|alanine and arginine rich domain containing protein
mm9_v1_chr16_+_37580303_37580398	0.238005	FOXD3.p2	BC024369|Hgd|15233|homogentisate 1, 2-dioxygenase	BC037628|Hgd|15233|homogentisate 1, 2-dioxygenase	AK050193|Hgd|15233|homogentisate 1, 2-dioxygenase	BC044758|Hgd|15233|homogentisate 1, 2-dioxygenase	AK002584|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr9_+_121643763_121643808	0.237883	FOXD3.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr6_+_83051509_83051651	0.237818	FOXD3.p2	NM_001081266|Ccdc142|243510|coiled-coil domain containing 142	AK038734|Ccdc142|243510|coiled-coil domain containing 142
mm9_v1_chr4_+_28740280_28740313	0.236197	FOXD3.p2	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chr8_-_46347384_46347394	0.236135	FOXD3.p2	AK005546|F11|109821|coagulation factor XI	NM_028066|F11|109821|coagulation factor XI
mm9_v1_chr5_-_69983484_69983543	0.23602	FOXD3.p2	AK220275|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK171299|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK166601|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	BC004084|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	NM_001038015|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK014950|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK015527|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK017588|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK051596|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK141408|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK168516|Gnpda2|67980|glucosamine-6-phosphate deaminase 2
mm9_v1_chr1_-_99024782_99024879	0.235864	FOXD3.p2	BC139066|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	BC139067|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK132668|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK161249|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK016647|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK029505|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	NM_028942|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1
mm9_v1_chr4_+_43394949_43394962	0.235251	FOXD3.p2	AK166260|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr5_-_4104331_4104507	0.235008	FOXD3.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr2_+_120802698_120802797	0.233447	FOXD3.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr14_-_73762840_73762848	0.233258	FOXD3.p2	AK205546|Itm2b|16432|integral membrane protein 2B	AK205709|Itm2b|16432|integral membrane protein 2B	AK209176|Itm2b|16432|integral membrane protein 2B	AK215843|Itm2b|16432|integral membrane protein 2B	AK217202|Itm2b|16432|integral membrane protein 2B	AK218926|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr4_+_154975473_154975535	0.233254	FOXD3.p2	AK080215|Slc35e2|320541|solute carrier family 35, member E2	BC058728|Slc35e2|320541|solute carrier family 35, member E2	NM_177186|Slc35e2|320541|solute carrier family 35, member E2
mm9_v1_chr10_-_120748007_120748075	0.23297	FOXD3.p2	AK173079|Tbc1d30|74694|TBC1 domain family, member 30	AK044521|Tbc1d30|74694|TBC1 domain family, member 30	BC072607|Tbc1d30|74694|TBC1 domain family, member 30	AK049989|Tbc1d30|74694|TBC1 domain family, member 30
mm9_v1_chr19_+_37282150_37282364	0.232881	FOXD3.p2	AK007511|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132455|March5|69104|membrane-associated ring finger (C3HC4) 5	BC132457|March5|69104|membrane-associated ring finger (C3HC4) 5	BC064752|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107215|March5|69104|membrane-associated ring finger (C3HC4) 5	BC107214|March5|69104|membrane-associated ring finger (C3HC4) 5
mm9_v1_chr4_-_44053229_44053254	0.232796	FOXD3.p2	AK033507|Gne|50798|glucosamine	AK202067|Gne|50798|glucosamine
mm9_v1_chr6_-_128388502_128388671	0.232455	FOXD3.p2	AK212190|Fkbp4|14228|FK506 binding protein 4	X17069|Fkbp4|14228|FK506 binding protein 4	X70887|Fkbp4|14228|FK506 binding protein 4	AK160202|Fkbp4|14228|FK506 binding protein 4	AK083912|Fkbp4|14228|FK506 binding protein 4	NM_010219|Fkbp4|14228|FK506 binding protein 4	AK089972|Fkbp4|14228|FK506 binding protein 4	BC003447|Fkbp4|14228|FK506 binding protein 4
mm9_v1_chr6_-_85463535_85463588	0.23205	FOXD3.p2	NM_020596|Egr4|13656|early growth response 4	AK141637|Egr4|13656|early growth response 4
mm9_v1_chr16_+_31934074_31934116	0.23131	FOXD3.p2	BC117748|Pigz|239827|phosphatidylinositol glycan anchor biosynthesis, class Z
mm9_v1_chr15_-_74539748_74539751	0.231123	FOXD3.p2	AK168885|Jrk|16469|jerky	NM_008415|Jrk|16469|jerky
mm9_v1_chr12_-_82695944_82695966	0.230355	FOXD3.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr9_+_118387306_118387461	0.229927	FOXD3.p2	NM_001164789|Eomes|13813|eomesodermin homolog (Xenopus laevis)	NM_010136|Eomes|13813|eomesodermin homolog (Xenopus laevis)	AB031037|Eomes|13813|eomesodermin homolog (Xenopus laevis)	BC094319|Eomes|13813|eomesodermin homolog (Xenopus laevis)
mm9_v1_chr11_-_106649652_106649810	0.229627	FOXD3.p2	BC108369|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK203495|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129873|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC129874|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC086320|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC046554|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	X65627|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	BC062916|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK044792|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK076018|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK088887|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK129022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK135173|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	AK166045|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	NM_007840|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr1_+_24685377_24685468	0.229564	FOXD3.p2	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr19_+_4100621_4100621	0.227288	FOXD3.p2	NM_008851|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1	Y08922|Pitpnm1|18739|phosphatidylinositol transfer protein, membrane-associated 1
mm9_v1_chr4_-_117354829_117354891	0.227042	FOXD3.p2	AF438610|Dmap1|66233|DNA methyltransferase 1-associated protein 1	NM_023178|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK012055|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK005270|Dmap1|66233|DNA methyltransferase 1-associated protein 1
mm9_v1_chr17_+_70911084_70911126	0.226449	FOXD3.p2	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr12_+_33832641_33832680	0.226303	FOXD3.p2	AK013145|Atxn7l1|380753|ataxin 7-like 1	BC100598|Atxn7l1|380753|ataxin 7-like 1	BC017546|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr6_+_41797547_41797583	0.226076	FOXD3.p2	AK138795|Pip|18716|prolactin induced protein	NM_008843|Pip|18716|prolactin induced protein	S73282|Pip|18716|prolactin induced protein	X02510|Pip|18716|prolactin induced protein	BC028889|Pip|18716|prolactin induced protein	AB017907|Pip|18716|prolactin induced protein	BC018264|Pip|18716|prolactin induced protein
mm9_v1_chr6_+_77192615_77192722	0.225559	FOXD3.p2	AK080836|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	NM_028880|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK014545|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1	AK053345|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr5_-_124053691_124053818	0.225375	FOXD3.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr14_+_47504276_47504358	0.225127	FOXD3.p2	AK034323|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr11_-_17111513_17111579	0.224672	FOXD3.p2	AK165942|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK007324|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009146|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009896|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK017153|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	BC020037|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AF349950|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)
mm9_v1_chr5_+_130371592_130371637	0.224591	FOXD3.p2	AK010551|Scand3|71970|SCAN domain containing 3	NM_183088|Scand3|71970|SCAN domain containing 3	BC137610|Scand3|71970|SCAN domain containing 3
mm9_v1_chr2_-_28438708_28438725	0.223788	FOXD3.p2	BC027247|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5	BC039171|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr3_-_94910786_94910815	0.22327	FOXD3.p2	AK158062|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK098097|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK150898|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	AK151984|Pip5k1a|18720|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm9_v1_chr4_+_43394824_43394863	0.222645	FOXD3.p2	NM_001037709|Rusc2|100213|RUN and SH3 domain containing 2
mm9_v1_chr6_+_112409498_112409498	0.221986	FOXD3.p2	BC024383|Cav3|12391|caveolin 3	NM_007617|Cav3|12391|caveolin 3
mm9_v1_chr9_-_57468501_57468580	0.220669	FOXD3.p2	AB211986|Lman1l|235416|lectin, mannose-binding 1 like	BC020188|Lman1l|235416|lectin, mannose-binding 1 like	NM_199222|Lman1l|235416|lectin, mannose-binding 1 like
mm9_v1_chr6_+_88415396_88415624	0.220046	FOXD3.p2	NM_019685|Ruvbl1|56505|RuvB-like protein 1	AK146374|Ruvbl1|56505|RuvB-like protein 1	AK146258|Ruvbl1|56505|RuvB-like protein 1	AK132783|Ruvbl1|56505|RuvB-like protein 1	AK156078|Ruvbl1|56505|RuvB-like protein 1	BC004718|Ruvbl1|56505|RuvB-like protein 1	AK145062|Ruvbl1|56505|RuvB-like protein 1	AK012170|Ruvbl1|56505|RuvB-like protein 1
mm9_v1_chr8_+_28153013_28153055	0.219569	FOXD3.p2	NM_001039077|Prosc|114863|proline synthetase co-transcribed	NM_001039078|Prosc|114863|proline synthetase co-transcribed	NM_054057|Prosc|114863|proline synthetase co-transcribed	BC061045|Prosc|114863|proline synthetase co-transcribed	AK147670|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr14_-_32137076_32137081	0.219451	FOXD3.p2	AK053204|Dnahc1|110084|dynein, axonemal, heavy chain 1	NM_001033668|Dnahc1|110084|dynein, axonemal, heavy chain 1
mm9_v1_chr2_+_84667196_84667249	0.219035	FOXD3.p2	AF150090|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	BC031448|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	AK013546|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)
mm9_v1_chrX_-_71638317_71638612	0.218971	FOXD3.p2	BC011237|Fam3a|66294|family with sequence similarity 3, member A	AK007715|Fam3a|66294|family with sequence similarity 3, member A	NM_025473|Fam3a|66294|family with sequence similarity 3, member A	BC019752|Fam3a|66294|family with sequence similarity 3, member A	BC069871|Fam3a|66294|family with sequence similarity 3, member A
mm9_v1_chr5_+_93112460_93112460	0.218603	FOXD3.p2	AF199421|Shroom3|27428|shroom family member 3	NM_015756|Shroom3|27428|shroom family member 3
mm9_v1_chr13_-_113717570_113717607	0.217995	FOXD3.p2	AK077924|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	BC029230|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	AK012158|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	NM_028151|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)	AK078091|Skiv2l2|72198|superkiller viralicidic activity 2-like 2 (S. cerevisiae)
mm9_v1_chr10_-_70700764_70701027	0.217541	FOXD3.p2	U57939|Tfam|21780|transcription factor A, mitochondrial	AK004857|Tfam|21780|transcription factor A, mitochondrial	BC001987|Tfam|21780|transcription factor A, mitochondrial	BC083084|Tfam|21780|transcription factor A, mitochondrial	AK050446|Tfam|21780|transcription factor A, mitochondrial	AK167348|Tfam|21780|transcription factor A, mitochondrial	NM_009360|Tfam|21780|transcription factor A, mitochondrial	AK163563|Tfam|21780|transcription factor A, mitochondrial	AK017974|Tfam|21780|transcription factor A, mitochondrial	AK161747|Tfam|21780|transcription factor A, mitochondrial	AK167777|Tfam|21780|transcription factor A, mitochondrial	AK169808|Tfam|21780|transcription factor A, mitochondrial	U63859|Tfam|21780|transcription factor A, mitochondrial	U63858|Tfam|21780|transcription factor A, mitochondrial	U63712|Tfam|21780|transcription factor A, mitochondrial
mm9_v1_chr1_-_94336403_94336417	0.217438	FOXD3.p2	AK184537|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
mm9_v1_chr6_+_78355148_78355151	0.216911	FOXD3.p2	NM_009043|Reg2|19693|regenerating islet-derived 2	AK008196|Reg2|19693|regenerating islet-derived 2
mm9_v1_chr5_-_122110456_122110520	0.216554	FOXD3.p2	BC027825|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	AK050332|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	AK148195|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	NM_028037|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10
mm9_v1_chr1_+_92509306_92509321	0.216392	FOXD3.p2	AK185916|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK207412|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK215258|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK212344|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK218596|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	AK214410|Cops8|108679|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm9_v1_chr1_+_57463594_57463619	0.215548	FOXD3.p2	AK165130|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	AK007831|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	BC071241|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr12_+_86629540_86629669	0.215513	FOXD3.p2	NM_172414|Fam164c|72350|family with sequence similarity 164, member C	AK036602|Fam164c|72350|family with sequence similarity 164, member C	BC049940|Fam164c|72350|family with sequence similarity 164, member C	AK032455|Fam164c|72350|family with sequence similarity 164, member C	AK033213|Fam164c|72350|family with sequence similarity 164, member C	AK012642|Fam164c|72350|family with sequence similarity 164, member C
mm9_v1_chr7_-_21838802_21838802	0.215003	FOXD3.p2	NM_001166715|Vmn1r120|435953|vomeronasal 1 receptor 120
mm9_v1_chr13_+_28234352_28234406	0.214987	FOXD3.p2	AK005447|Prl5a1|28078|prolactin family 5, subfamily a, member 1	NM_023746|Prl5a1|28078|prolactin family 5, subfamily a, member 1	BC051672|Prl5a1|28078|prolactin family 5, subfamily a, member 1	AF226611|Prl5a1|28078|prolactin family 5, subfamily a, member 1
mm9_v1_chr7_+_120909509_120909519	0.21332	FOXD3.p2	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr8_+_112515370_112515467	0.211356	FOXD3.p2	BC024264|Tat|234724|tyrosine aminotransferase
mm9_v1_chr6_-_85770936_85770965	0.210139	FOXD3.p2	BC024605|Cml5|69049|camello-like 5	BC014696|Cml3|93674|camello-like 3	AK007530|Cml5|69049|camello-like 5	NM_023493|Cml5|69049|camello-like 5
mm9_v1_chr14_+_55045792_55045808	0.209965	FOXD3.p2	BC060043|Mrpl52|68836|mitochondrial ribosomal protein L52
mm9_v1_chr6_-_30193802_30193802	0.209938	FOXD3.p2	NM_001169577|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr3_-_156224638_156224816	0.209804	FOXD3.p2	AK083124|4930570G19Rik|329782|RIKEN cDNA 4930570G19 gene	AK016265|4930570G19Rik|329782|RIKEN cDNA 4930570G19 gene	BC048612|4930570G19Rik|329782|RIKEN cDNA 4930570G19 gene
mm9_v1_chr2_+_62502329_62502489	0.209504	FOXD3.p2	AK046347|Gca|227960|grancalcin	AK050540|Gca|227960|grancalcin	AK033740|Gca|227960|grancalcin	AK040549|Gca|227960|grancalcin	AK049317|Gca|227960|grancalcin	AK078915|Gca|227960|grancalcin	NM_145523|Gca|227960|grancalcin	AF518325|Gca|227960|grancalcin	BC021450|Gca|227960|grancalcin	AB088388|Gca|227960|grancalcin
mm9_v1_chr17_-_32967155_32967192	0.209136	FOXD3.p2	BC096552|Zfp799|240064|zinc finger protein 799	BC062813|Zfp799|240064|zinc finger protein 799	AK083640|Zfp799|240064|zinc finger protein 799	AK137037|Zfp799|240064|zinc finger protein 799	AK031686|Zfp799|240064|zinc finger protein 799	NM_177359|Zfp799|240064|zinc finger protein 799
mm9_v1_chr10_+_128242637_128242644	0.208924	FOXD3.p2	AK053314|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK045345|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr11_+_5662121_5662197	0.208093	FOXD3.p2	AK009198|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	AK005556|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	AK008730|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	BC052911|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	BC094935|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene
mm9_v1_chr7_-_123138599_123138599	0.207645	FOXD3.p2	NM_011445|Sox6|20679|SRY-box containing gene 6	U32614|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr18_-_39649411_39649429	0.207534	FOXD3.p2	BC008154|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr3_+_135011000_135011069	0.206306	FOXD3.p2	AK029525|Nhedc1|74446|Na+/H+ exchanger domain containing 1	NM_028946|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK007064|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK015318|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK016883|Nhedc1|74446|Na+/H+ exchanger domain containing 1	AK016917|Nhedc1|74446|Na+/H+ exchanger domain containing 1	BC025002|Nhedc1|74446|Na+/H+ exchanger domain containing 1
mm9_v1_chr11_-_84729844_84729889	0.206117	FOXD3.p2	BC089554|Znhit3|448850|zinc finger, HIT type 3	AK002888|Znhit3|448850|zinc finger, HIT type 3	AK003721|Znhit3|448850|zinc finger, HIT type 3	AK004259|Znhit3|448850|zinc finger, HIT type 3	NM_001005223|Znhit3|448850|zinc finger, HIT type 3	AK014350|Znhit3|448850|zinc finger, HIT type 3
mm9_v1_chr6_-_13789847_13789902	0.205876	FOXD3.p2	BC065154|Gpr85|64450|G protein-coupled receptor 85	NM_145066|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr5_+_23900197_23900242	0.204893	FOXD3.p2	AK014688|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK076315|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK049152|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK166704|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK170334|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK014319|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK030624|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK038760|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm9_v1_chr10_+_99950922_99950922	0.204582	FOXD3.p2	NM_146009|Cep290|216274|centrosomal protein 290
mm9_v1_chr17_+_57136748_57136795	0.204462	FOXD3.p2	AK010930|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	AK009812|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	NM_025538|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	AK007380|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)	BC029677|Alkbh7|66400|alkB, alkylation repair homolog 7 (E. coli)
mm9_v1_chr1_-_140753398_140753430	0.203796	FOXD3.p2	AK141677|2310009B15Rik|69549|RIKEN cDNA 2310009B15 gene	NM_001081226|2310009B15Rik|69549|RIKEN cDNA 2310009B15 gene
mm9_v1_chr9_+_57981881_57981881	0.202604	FOXD3.p2	NM_001162476|Stra6|20897|stimulated by retinoic acid gene 6
mm9_v1_chr17_+_45700882_45700945	0.202218	FOXD3.p2	AK155551|Slc35b2|73836|solute carrier family 35, member B2	AK144403|Slc35b2|73836|solute carrier family 35, member B2	AK003377|Slc35b2|73836|solute carrier family 35, member B2	AK090329|Slc35b2|73836|solute carrier family 35, member B2	AK152362|Slc35b2|73836|solute carrier family 35, member B2	BC025875|Slc35b2|73836|solute carrier family 35, member B2	BC036992|Slc35b2|73836|solute carrier family 35, member B2	AF414190|Slc35b2|73836|solute carrier family 35, member B2	AK154868|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr16_+_45158927_45158941	0.201893	FOXD3.p2	AK005266|Atg3|67841|autophagy-related 3 (yeast)	AK011409|Atg3|67841|autophagy-related 3 (yeast)	AK150914|Atg3|67841|autophagy-related 3 (yeast)	AK159231|Atg3|67841|autophagy-related 3 (yeast)	NM_026402|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr11_-_101634938_101634966	0.20172	FOXD3.p2	BC068248|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr16_-_36131169_36131274	0.201562	FOXD3.p2	BC139156|Csta|209294|cystatin A	BC139157|Csta|209294|cystatin A	AK137702|Csta|209294|cystatin A	NM_001033239|Csta|209294|cystatin A
mm9_v1_chr9_-_41932195_41932209	0.200671	FOXD3.p2	AB015790|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chr3_-_129525375_129525422	0.199356	FOXD3.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr8_+_97362292_97362384	0.198651	FOXD3.p2	AK154343|Coq9|67914|coenzyme Q9 homolog (yeast)	AK158979|Coq9|67914|coenzyme Q9 homolog (yeast)	AK009179|Coq9|67914|coenzyme Q9 homolog (yeast)	BC036386|Coq9|67914|coenzyme Q9 homolog (yeast)	NM_026452|Coq9|67914|coenzyme Q9 homolog (yeast)	AK217654|Coq9|67914|coenzyme Q9 homolog (yeast)
mm9_v1_chr18_+_3383216_3383321	0.197302	FOXD3.p2	AK004875|Cul2|71745|cullin 2	NM_029402|Cul2|71745|cullin 2	AK160597|Cul2|71745|cullin 2	AK220287|Cul2|71745|cullin 2	AK144693|Cul2|71745|cullin 2	AK028589|Cul2|71745|cullin 2	BC027428|Cul2|71745|cullin 2	BC026779|Cul2|71745|cullin 2
mm9_v1_chr16_-_65105465_65105679	0.196432	FOXD3.p2	BC120507|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	BC137604|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	NM_008310|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	Z14224|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F	AK045364|Htr1f|15557|5-hydroxytryptamine (serotonin) receptor 1F
mm9_v1_chr7_+_104100067_104100098	0.196345	FOXD3.p2	AK164179|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK047091|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK050718|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chrX_-_7258126_7258153	0.195958	FOXD3.p2	BC132580|Magix|54634|MAGI family member, X-linked	BC132582|Magix|54634|MAGI family member, X-linked
mm9_v1_chr18_-_47528483_47528523	0.195602	FOXD3.p2	BC059238|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK042751|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_018744|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK082711|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm9_v1_chrY_+_2156898_2156920	0.195032	FOXD3.p2	AK016258|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_001166384|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_011253|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	BC150670|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	Y15131|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	U36929|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1
mm9_v1_chr16_-_20716002_20716191	0.193607	FOXD3.p2	AK155104|Clcn2|12724|chloride channel 2	AK171231|Clcn2|12724|chloride channel 2	BC120699|Clcn2|12724|chloride channel 2	BC137625|Clcn2|12724|chloride channel 2	AF139724|Clcn2|12724|chloride channel 2	AF097415|Clcn2|12724|chloride channel 2	AK172148|Clcn2|12724|chloride channel 2
mm9_v1_chr6_+_48879894_48879905	0.192668	FOXD3.p2	NM_001081273|1600015I10Rik|69761|RIKEN cDNA 1600015I10 gene	BC085280|1600015I10Rik|69761|RIKEN cDNA 1600015I10 gene
mm9_v1_chr9_-_20703010_20703071	0.192536	FOXD3.p2	U70733|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	BC008511|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	NM_016876|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AF108214|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AK168362|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G	AK038249|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G
mm9_v1_chr6_-_83725776_83725818	0.191514	FOXD3.p2	AK157834|Tex261|21766|testis expressed gene 261	NM_009357|Tex261|21766|testis expressed gene 261
mm9_v1_chr10_+_21713735_21713756	0.190019	FOXD3.p2	AK132234|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr11_+_95246169_95246271	0.189567	FOXD3.p2	AK160124|Slc35b1|110172|solute carrier family 35, member B1	AK007711|Slc35b1|110172|solute carrier family 35, member B1	AK002961|Slc35b1|110172|solute carrier family 35, member B1	D87990|Slc35b1|110172|solute carrier family 35, member B1	NM_016752|Slc35b1|110172|solute carrier family 35, member B1	BC002029|Slc35b1|110172|solute carrier family 35, member B1
mm9_v1_chr7_+_120909680_120909687	0.189422	FOXD3.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr13_-_76194247_76194443	0.18932	FOXD3.p2	AY255541|Gpr150|238725|G protein-coupled receptor 150	BC118612|Gpr150|238725|G protein-coupled receptor 150	BC118614|Gpr150|238725|G protein-coupled receptor 150	AK047609|Gpr150|238725|G protein-coupled receptor 150	NM_175495|Gpr150|238725|G protein-coupled receptor 150
mm9_v1_chrY_+_2188491_2188510	0.188972	FOXD3.p2	AK016258|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_001166384|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	NM_011253|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1	Y15131|Rbmy1a1|19657|RNA binding motif protein, Y chromosome, family 1, member A1
mm9_v1_chr6_-_87800966_87801099	0.188731	FOXD3.p2	AK078427|Cnbp|12785|cellular nucleic acid binding protein	L12693|Cnbp|12785|cellular nucleic acid binding protein	X63866|Cnbp|12785|cellular nucleic acid binding protein	Z11870|Cnbp|12785|cellular nucleic acid binding protein	Z11871|Cnbp|12785|cellular nucleic acid binding protein	BC058723|Cnbp|12785|cellular nucleic acid binding protein	U20326|Cnbp|12785|cellular nucleic acid binding protein	AK151528|Cnbp|12785|cellular nucleic acid binding protein	AK146593|Cnbp|12785|cellular nucleic acid binding protein	AK159810|Cnbp|12785|cellular nucleic acid binding protein	AK153414|Cnbp|12785|cellular nucleic acid binding protein	AK147157|Cnbp|12785|cellular nucleic acid binding protein	AK146367|Cnbp|12785|cellular nucleic acid binding protein	AK145444|Cnbp|12785|cellular nucleic acid binding protein	AK146224|Cnbp|12785|cellular nucleic acid binding protein	AK151961|Cnbp|12785|cellular nucleic acid binding protein	AK146301|Cnbp|12785|cellular nucleic acid binding protein	AK146344|Cnbp|12785|cellular nucleic acid binding protein	AK151317|Cnbp|12785|cellular nucleic acid binding protein	AK144740|Cnbp|12785|cellular nucleic acid binding protein	AK075760|Cnbp|12785|cellular nucleic acid binding protein	NM_001109745|Cnbp|12785|cellular nucleic acid binding protein	NM_001109746|Cnbp|12785|cellular nucleic acid binding protein	NM_013493|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr18_+_47009692_47009701	0.188672	FOXD3.p2	AK014652|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene	NM_029008|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene	BC113158|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene
mm9_v1_chr17_+_47505827_47505888	0.18847	FOXD3.p2	NM_001146211|Mrps10|64657|mitochondrial ribosomal protein S10	NM_001146212|Mrps10|64657|mitochondrial ribosomal protein S10	AK142675|Mrps10|64657|mitochondrial ribosomal protein S10	AK004151|Mrps10|64657|mitochondrial ribosomal protein S10	BC038917|Mrps10|64657|mitochondrial ribosomal protein S10	BC096043|Mrps10|64657|mitochondrial ribosomal protein S10
mm9_v1_chr7_-_112145415_112145415	0.187062	FOXD3.p2	NM_146760|Olfr672|258755|olfactory receptor 672
mm9_v1_chr14_-_21277869_21277886	0.186859	FOXD3.p2	AK178718|Anxa7|11750|annexin A7	AK178726|Anxa7|11750|annexin A7
mm9_v1_chr1_+_120285920_120286055	0.1863	FOXD3.p2	AK080782|Clasp1|76707|CLIP associating protein 1	BC157938|Clasp1|76707|CLIP associating protein 1	BC158064|Clasp1|76707|CLIP associating protein 1	AJ276962|Clasp1|76707|CLIP associating protein 1	AK031181|Clasp1|76707|CLIP associating protein 1
mm9_v1_chr18_+_56722222_56722222	0.186131	FOXD3.p2	AK016958|Phax|56698|phosphorylated adaptor for RNA export	NM_001162989|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr5_+_95885824_95885878	0.185797	FOXD3.p2	AK054417|D5Ertd577e|320549|DNA segment, Chr 5, ERATO Doi 577, expressed	NM_177187|D5Ertd577e|320549|DNA segment, Chr 5, ERATO Doi 577, expressed	BC145804|D5Ertd577e|320549|DNA segment, Chr 5, ERATO Doi 577, expressed
mm9_v1_chr9_+_122943854_122943866	0.185693	FOXD3.p2	AK035279|Tgm4|331046|transglutaminase 4 (prostate)	NM_177911|Tgm4|331046|transglutaminase 4 (prostate)	AF486627|Tgm4|331046|transglutaminase 4 (prostate)	BC141297|Tgm4|331046|transglutaminase 4 (prostate)	BC145622|Tgm4|331046|transglutaminase 4 (prostate)
mm9_v1_chr4_-_128639595_128639690	0.185445	FOXD3.p2	BC138973|Adc|242669|arginine decarboxylase	BC138974|Adc|242669|arginine decarboxylase	NM_172875|Adc|242669|arginine decarboxylase	BC065772|Adc|242669|arginine decarboxylase	BC028775|Adc|242669|arginine decarboxylase	AK047522|Adc|242669|arginine decarboxylase	AK077201|Adc|242669|arginine decarboxylase	AK080568|Adc|242669|arginine decarboxylase	AK154564|Adc|242669|arginine decarboxylase	AK148717|Adc|242669|arginine decarboxylase
mm9_v1_chr7_+_109214226_109214271	0.183534	FOXD3.p2	AK040538|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	NM_011644|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	AK013894|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	AK041300|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2
mm9_v1_chr11_+_95122842_95123008	0.183103	FOXD3.p2	AF235035|Tac4|93670|tachykinin 4	NM_053093|Tac4|93670|tachykinin 4	BC119426|Tac4|93670|tachykinin 4	AF515827|Tac4|93670|tachykinin 4
mm9_v1_chr11_+_48639639_48639641	0.182462	FOXD3.p2	NM_053166|Trim7|94089|tripartite motif-containing 7	AF396656|Trim7|94089|tripartite motif-containing 7
mm9_v1_chr9_-_110848570_110848661	0.182339	FOXD3.p2	M87321|Tdgf1|21667|teratocarcinoma-derived growth factor 1	BC052646|Tdgf1|21667|teratocarcinoma-derived growth factor 1	AK133730|Tdgf1|21667|teratocarcinoma-derived growth factor 1	AK163969|Tdgf1|21667|teratocarcinoma-derived growth factor 1	NM_011562|Tdgf1|21667|teratocarcinoma-derived growth factor 1
mm9_v1_chr13_+_23962141_23962200	0.18202	FOXD3.p2	NM_001170638|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	NM_009198|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AF361761|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	AK164712|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	X77241|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1	BC013445|Slc17a1|20504|solute carrier family 17 (sodium phosphate), member 1
mm9_v1_chr16_-_26371711_26371924	0.181972	FOXD3.p2	CT010299|Cldn1|12737|claudin 1	EU076705|Cldn1|12737|claudin 1	BC008536|Cldn1|12737|claudin 1	AF072127|Cldn1|12737|claudin 1	AK054207|Cldn1|12737|claudin 1	BC002003|Cldn1|12737|claudin 1	AK036762|Cldn1|12737|claudin 1	AK028428|Cldn1|12737|claudin 1	AK081601|Cldn1|12737|claudin 1	AK036780|Cldn1|12737|claudin 1	AK040604|Cldn1|12737|claudin 1	NM_016674|Cldn1|12737|claudin 1
mm9_v1_chr15_-_66801093_66801186	0.181783	FOXD3.p2	BC141246|Ndrg1|17988|N-myc downstream regulated gene 1	BC171968|Ndrg1|17988|N-myc downstream regulated gene 1	BC015282|Ndrg1|17988|N-myc downstream regulated gene 1	U52073|Ndrg1|17988|N-myc downstream regulated gene 1	BC071235|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr15_-_98493302_98493343	0.180749	FOXD3.p2	AK014820|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	BC049928|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	NM_001080981|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK014272|Ddx23|74351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
mm9_v1_chr5_+_144578646_144578690	0.180294	FOXD3.p2	NM_013557|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AY033898|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	AK155206|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1	BC028923|Eif2ak1|15467|eukaryotic translation initiation factor 2 alpha kinase 1
mm9_v1_chr19_-_29078349_29078367	0.180031	FOXD3.p2	NM_001178039|Gm10136|672214|predicted pseudogene 10136
mm9_v1_chr14_+_56178853_56178921	0.179975	FOXD3.p2	NM_133734|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK033540|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK170657|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK158784|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr12_-_32017267_32017279	0.179789	FOXD3.p2	AK209175|Dld|13382|dihydrolipoamide dehydrogenase
mm9_v1_chr7_-_125263314_125263384	0.179439	FOXD3.p2	AK004228|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK012904|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK005514|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr5_+_43906796_43906826	0.179114	FOXD3.p2	AK017441|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	NM_001135172|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	BC090967|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr17_-_8340473_8340696	0.178575	FOXD3.p2	BC100330|Rnaset2b|68195|ribonuclease T2B	BC031496|Rnaset2a|100037283|ribonuclease T2A	AK019234|Rnaset2a|100037283|ribonuclease T2A	AK018722|Rnaset2a|100037283|ribonuclease T2A	NM_001083938|Rnaset2a|100037283|ribonuclease T2A	AK015947|Rnaset2a|100037283|ribonuclease T2A	NM_026611|Rnaset2b|68195|ribonuclease T2B
mm9_v1_chr17_+_26389911_26389996	0.178053	FOXD3.p2	BC055875|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	BC019194|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK211801|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr14_+_70132570_70132619	0.177577	FOXD3.p2	AK133329|4930480K23Rik|75016|RIKEN cDNA 4930480K23 gene
mm9_v1_chr16_+_36081360_36081360	0.177356	FOXD3.p2	NM_001159422|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr6_+_89664196_89664196	0.176488	FOXD3.p2	NM_053228|Vmn1r40|113855|vomeronasal 1 receptor 40
mm9_v1_chr5_+_120566489_120566582	0.176318	FOXD3.p2	AK146493|Rbm19|74111|RNA binding motif protein 19	AK053511|Rbm19|74111|RNA binding motif protein 19	BC025619|Rbm19|74111|RNA binding motif protein 19	NM_028762|Rbm19|74111|RNA binding motif protein 19	AK167100|Rbm19|74111|RNA binding motif protein 19	BC034010|Rbm19|74111|RNA binding motif protein 19
mm9_v1_chr11_+_34214821_34214821	0.176101	FOXD3.p2	BC072605|Fam196b|574403|family with sequence similarity 196, member B	NM_001025382|Fam196b|574403|family with sequence similarity 196, member B
mm9_v1_chr9_-_99469275_99469317	0.176068	FOXD3.p2	BC038866|Armc8|74125|armadillo repeat containing 8	AK004793|Armc8|74125|armadillo repeat containing 8	NM_001166138|Armc8|74125|armadillo repeat containing 8	NM_028768|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr19_+_17468498_17468584	0.175968	FOXD3.p2	NM_019437|Rfk|54391|riboflavin kinase	AK002806|Rfk|54391|riboflavin kinase
mm9_v1_chr1_-_141456740_141456821	0.175857	FOXD3.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr3_-_10331334_10331440	0.175687	FOXD3.p2	BC055722|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AF042730|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160467|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK083238|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK145472|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK011770|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK160203|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK165977|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	BC049080|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK078406|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK152774|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK147778|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK153457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	AK168457|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1	NM_018864|Impa1|55980|inositol (myo)-1(or 4)-monophosphatase 1
mm9_v1_chr7_-_110401018_110401018	0.175646	FOXD3.p2	AF393638|Dub2a|384701|deubiquitinating enzyme 2a	NM_001001559|Dub2a|384701|deubiquitinating enzyme 2a
mm9_v1_chr9_+_69860400_69860416	0.175149	FOXD3.p2	BC048705|Gtf2a2|235459|general transcription factor II A, 2
mm9_v1_chr7_+_6683288_6683655	0.174192	FOXD3.p2	AF229257|Usp29|57775|ubiquitin specific peptidase 29	AK142304|Usp29|57775|ubiquitin specific peptidase 29	AK084156|Usp29|57775|ubiquitin specific peptidase 29	AF227912|Usp29|57775|ubiquitin specific peptidase 29	AK038752|Usp29|57775|ubiquitin specific peptidase 29	NM_021323|Usp29|57775|ubiquitin specific peptidase 29
mm9_v1_chr18_+_56732519_56732526	0.174118	FOXD3.p2	NM_019996|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr11_+_55017825_55017912	0.174092	FOXD3.p2	NM_153139|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1	AY211262|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1	BC138556|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1	BC138558|Slc36a1|215335|solute carrier family 36 (proton/amino acid symporter), member 1
mm9_v1_chr16_+_11313901_11314030	0.17387	FOXD3.p2	AF061505|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	NM_011608|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	AK020247|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	BC027519|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17
mm9_v1_chr10_-_127188724_127188780	0.173824	FOXD3.p2	BC125279|Gpr182|11536|G protein-coupled receptor 182	D17292|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr8_-_96958065_96958186	0.173252	FOXD3.p2	AK080381|9330175E14Rik|320377|RIKEN cDNA 9330175E14 gene	AK034303|9330175E14Rik|320377|RIKEN cDNA 9330175E14 gene
mm9_v1_chr18_+_35776026_35776084	0.173218	FOXD3.p2	AK012839|Paip2|67869|polyadenylate-binding protein-interacting protein 2
mm9_v1_chr3_+_95965892_95965939	0.173021	FOXD3.p2	NM_181409|Mtmr11|194126|myotubularin related protein 11	AK132375|Mtmr11|194126|myotubularin related protein 11
mm9_v1_chrX_-_16488889_16488889	0.171864	FOXD3.p2	BC090623|Ndp|17986|Norrie disease (pseudoglioma) (human)	NM_010883|Ndp|17986|Norrie disease (pseudoglioma) (human)
mm9_v1_chr6_+_108733041_108733073	0.170974	FOXD3.p2	NM_026011|Arl8b|67166|ADP-ribosylation factor-like 8B	AK030689|Arl8b|67166|ADP-ribosylation factor-like 8B
mm9_v1_chr8_-_72149070_72149075	0.170683	FOXD3.p2	AK139223|Zfp868|234362|zinc finger protein 868	NM_001045553|Zfp868|234362|zinc finger protein 868
mm9_v1_chr19_-_43986881_43986881	0.169568	FOXD3.p2	AY383729|Dnmbp|71972|dynamin binding protein	NM_028029|Dnmbp|71972|dynamin binding protein
mm9_v1_chr3_+_98026078_98026095	0.169266	FOXD3.p2	AK008049|Reg4|67709|regenerating islet-derived family, member 4	AK008438|Reg4|67709|regenerating islet-derived family, member 4	AK162316|Reg4|67709|regenerating islet-derived family, member 4	NM_026328|Reg4|67709|regenerating islet-derived family, member 4	AK160329|Reg4|67709|regenerating islet-derived family, member 4	BC019465|Reg4|67709|regenerating islet-derived family, member 4
mm9_v1_chr2_+_136717324_136717369	0.16918	FOXD3.p2	BC067037|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr2_+_122012007_122012007	0.169008	FOXD3.p2	AK016695|4933406J08Rik|74401|RIKEN cDNA 4933406J08 gene	NM_028914|4933406J08Rik|74401|RIKEN cDNA 4933406J08 gene
mm9_v1_chr13_+_41012969_41013020	0.168697	FOXD3.p2	AY236875|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_133219|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK019924|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	BC054845|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr16_+_25683848_25683850	0.168692	FOXD3.p2	AK138305|Trp63|22061|transformation related protein 63	NM_001127259|Trp63|22061|transformation related protein 63	NM_001127260|Trp63|22061|transformation related protein 63	NM_001127261|Trp63|22061|transformation related protein 63
mm9_v1_chr4_-_11181373_11181380	0.168344	FOXD3.p2	AK169552|Ints8|72656|integrator complex subunit 8	AK049513|Ints8|72656|integrator complex subunit 8
mm9_v1_chr11_+_110829346_110829387	0.168297	FOXD3.p2	AK078905|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	AK128942|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	NM_010604|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16	BC033442|Kcnj16|16517|potassium inwardly-rectifying channel, subfamily J, member 16
mm9_v1_chr1_-_65128840_65128863	0.16812	FOXD3.p2	BC056455|Crygb|12965|crystallin, gamma B	NM_144761|Crygb|12965|crystallin, gamma B	EF426303|Crygb|12965|crystallin, gamma B	AK143110|Crygb|12965|crystallin, gamma B
mm9_v1_chr4_-_134409044_134409108	0.167986	FOXD3.p2	AY364165|Tmem57|66146|transmembrane protein 57	BC054355|Tmem57|66146|transmembrane protein 57	BC010714|Tmem57|66146|transmembrane protein 57
mm9_v1_chr18_+_63158808_63158850	0.167044	FOXD3.p2	AK217399|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr5_+_138526303_138526341	0.167038	FOXD3.p2	NM_029869|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	NM_133906|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK036807|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK031759|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020355|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK154831|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK020039|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1	AK054323|Zkscan1|74570|zinc finger with KRAB and SCAN domains 1
mm9_v1_chr5_-_111209468_111209636	0.16698	FOXD3.p2	BC021446|Pus1|56361|pseudouridine synthase 1	BC034359|Pus1|56361|pseudouridine synthase 1	AB041563|Pus1|56361|pseudouridine synthase 1	AK089258|Pus1|56361|pseudouridine synthase 1	NM_001025561|Pus1|56361|pseudouridine synthase 1	NM_019700|Pus1|56361|pseudouridine synthase 1	NM_001025562|Pus1|56361|pseudouridine synthase 1	AK161521|Pus1|56361|pseudouridine synthase 1
mm9_v1_chr6_+_85537524_85537524	0.166912	FOXD3.p2	AF425257|Alms1|236266|Alstrom syndrome 1 homolog (human)	NM_145223|Alms1|236266|Alstrom syndrome 1 homolog (human)
mm9_v1_chr4_-_14548903_14548926	0.166378	FOXD3.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr8_+_48909835_48909835	0.165974	FOXD3.p2	AK008821|Cldn22|75677|claudin 22	NM_029383|Cldn22|75677|claudin 22
mm9_v1_chr2_+_145760519_145760551	0.165675	FOXD3.p2	AK019712|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK038772|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	NM_175280|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	AK086391|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107030|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC107031|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC057361|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene	BC058733|4930529M08Rik|78774|RIKEN cDNA 4930529M08 gene
mm9_v1_chr13_-_98669545_98669547	0.165434	FOXD3.p2	AK020332|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr8_+_85913750_85913789	0.164928	FOXD3.p2	AK019534|Clgn|12745|calmegin	AK034525|Clgn|12745|calmegin	D14117|Clgn|12745|calmegin	D86323|Clgn|12745|calmegin	U08373|Clgn|12745|calmegin	BC050767|Clgn|12745|calmegin	NM_009904|Clgn|12745|calmegin
mm9_v1_chr2_+_130230994_130231035	0.164409	FOXD3.p2	NM_029375|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC049710|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	NM_001163483|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC137914|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC137915|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene
mm9_v1_chr2_+_181054406_181054528	0.163979	FOXD3.p2	NM_001001882|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166665|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166666|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166667|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166668|Rtel1|269400|regulator of telomere elongation helicase 1	AK142225|Rtel1|269400|regulator of telomere elongation helicase 1	BC057352|Rtel1|269400|regulator of telomere elongation helicase 1	AK145145|Rtel1|269400|regulator of telomere elongation helicase 1	AK173097|Rtel1|269400|regulator of telomere elongation helicase 1	AY481619|Rtel1|269400|regulator of telomere elongation helicase 1	AY481620|Rtel1|269400|regulator of telomere elongation helicase 1	AY481621|Rtel1|269400|regulator of telomere elongation helicase 1	AY481622|Rtel1|269400|regulator of telomere elongation helicase 1	AY481623|Rtel1|269400|regulator of telomere elongation helicase 1	BC105578|Rtel1|269400|regulator of telomere elongation helicase 1
mm9_v1_chr9_+_26807281_26807337	0.162956	FOXD3.p2	AK021335|Thyn1|77862|thymocyte nuclear protein 1	AK077639|Thyn1|77862|thymocyte nuclear protein 1	BC016594|Thyn1|77862|thymocyte nuclear protein 1	AB080370|Thyn1|77862|thymocyte nuclear protein 1
mm9_v1_chr8_+_119983664_119983684	0.162426	FOXD3.p2	
mm9_v1_chr7_+_31350445_31350445	0.160519	FOXD3.p2	AK154129|Tmem149|101883|transmembrane protein 149	NM_145580|Tmem149|101883|transmembrane protein 149
mm9_v1_chr7_-_52722144_52722269	0.158727	FOXD3.p2	AY095934|Bax|12028|BCL2-associated X protein	L22472|Bax|12028|BCL2-associated X protein	AK149994|Bax|12028|BCL2-associated X protein	AK013298|Bax|12028|BCL2-associated X protein	BC053380|Bax|12028|BCL2-associated X protein	BC018228|Bax|12028|BCL2-associated X protein	AK159233|Bax|12028|BCL2-associated X protein	NM_007527|Bax|12028|BCL2-associated X protein
mm9_v1_chr8_-_113555584_113555650	0.158353	FOXD3.p2	AK033235|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_001190786|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm9_v1_chr12_+_106801381_106801438	0.157525	FOXD3.p2	NM_009747|Bdkrb2|12062|bradykinin receptor, beta 2	X78438|Bdkrb2|12062|bradykinin receptor, beta 2	X69682|Bdkrb2|12062|bradykinin receptor, beta 2	AK132469|Bdkrb2|12062|bradykinin receptor, beta 2	BC137755|Bdkrb2|12062|bradykinin receptor, beta 2	BC137756|Bdkrb2|12062|bradykinin receptor, beta 2
mm9_v1_chr1_-_72583137_72583137	0.156321	FOXD3.p2	BC098191|March4|381270|membrane-associated ring finger (C3HC4) 4	NM_001045533|March4|381270|membrane-associated ring finger (C3HC4) 4
mm9_v1_chr5_+_36807807_36807839	0.155533	FOXD3.p2	AK161688|Grpel1|17713|GrpE-like 1, mitochondrial	AK048732|Grpel1|17713|GrpE-like 1, mitochondrial	NM_024478|Grpel1|17713|GrpE-like 1, mitochondrial	AK089113|Grpel1|17713|GrpE-like 1, mitochondrial	AK050445|Grpel1|17713|GrpE-like 1, mitochondrial
mm9_v1_chr6_+_113573980_113574047	0.155408	FOXD3.p2	AK159238|Vhl|22346|von Hippel-Lindau tumor suppressor	U12570|Vhl|22346|von Hippel-Lindau tumor suppressor	AK171604|Vhl|22346|von Hippel-Lindau tumor suppressor	AK171264|Vhl|22346|von Hippel-Lindau tumor suppressor	NM_009507|Vhl|22346|von Hippel-Lindau tumor suppressor	S76748|Vhl|22346|von Hippel-Lindau tumor suppressor	BC052417|Vhl|22346|von Hippel-Lindau tumor suppressor	AK161408|Vhl|22346|von Hippel-Lindau tumor suppressor
mm9_v1_chr17_-_22099417_22099430	0.155237	FOXD3.p2	BC096765|Zfp942|73233|zinc finger protein 942	AK032425|Zfp942|73233|zinc finger protein 942	NM_001199048|Zfp942|73233|zinc finger protein 942
mm9_v1_chr8_+_13907735_13907819	0.154838	FOXD3.p2	AK008027|Fbxo25|66822|F-box protein 25	AK134722|Fbxo25|66822|F-box protein 25	AK013645|Fbxo25|66822|F-box protein 25	AK018626|Fbxo25|66822|F-box protein 25	NM_025785|Fbxo25|66822|F-box protein 25	BC014749|Fbxo25|66822|F-box protein 25
mm9_v1_chr16_+_45158943_45159161	0.154745	FOXD3.p2	AK078877|Atg3|67841|autophagy-related 3 (yeast)	BC010809|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr13_+_59686693_59686787	0.154684	FOXD3.p2	NM_030153|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC027201|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	AY102701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC043701|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	BC056435|Naa35|78689|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
mm9_v1_chr16_+_41533317_41533456	0.154558	FOXD3.p2	AK140043|Lsamp|268890|limbic system-associated membrane protein	NM_175548|Lsamp|268890|limbic system-associated membrane protein	AK044845|Lsamp|268890|limbic system-associated membrane protein	AK140663|Lsamp|268890|limbic system-associated membrane protein
mm9_v1_chr11_+_62692976_62693095	0.15429	FOXD3.p2	AK077277|Fam18b|67510|family with sequence similarity 18, member B	NM_026210|Fam18b|67510|family with sequence similarity 18, member B	AK150936|Fam18b|67510|family with sequence similarity 18, member B	BC115504|Fam18b|67510|family with sequence similarity 18, member B	BC115505|Fam18b|67510|family with sequence similarity 18, member B	AK007707|Fam18b|67510|family with sequence similarity 18, member B	AK017572|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr10_-_74495269_74495330	0.15404	FOXD3.p2	BC147792|Rtdr1|71236|rhabdoid tumor deletion region gene 1	BC147801|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163534|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163535|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK017008|Rtdr1|71236|rhabdoid tumor deletion region gene 1	AK077078|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_001163533|Rtdr1|71236|rhabdoid tumor deletion region gene 1	NM_027730|Rtdr1|71236|rhabdoid tumor deletion region gene 1
mm9_v1_chr15_-_79845237_79845237	0.153613	FOXD3.p2	BC053430|Pdgfb|18591|platelet derived growth factor, B polypeptide	NM_011057|Pdgfb|18591|platelet derived growth factor, B polypeptide
mm9_v1_chr2_-_30837369_30837464	0.153543	FOXD3.p2	AK168109|BC005624|227707|cDNA sequence BC005624	BC005624|BC005624|227707|cDNA sequence BC005624	AK158706|BC005624|227707|cDNA sequence BC005624	AK163554|BC005624|227707|cDNA sequence BC005624	NM_144885|BC005624|227707|cDNA sequence BC005624
mm9_v1_chr5_+_147196560_147196581	0.153456	FOXD3.p2	AK044481|Wasf3|245880|WAS protein family, member 3	BC027038|Wasf3|245880|WAS protein family, member 3	NM_145155|Wasf3|245880|WAS protein family, member 3
mm9_v1_chr17_+_74888823_74888973	0.153281	FOXD3.p2	AK166347|Yipf4|67864|Yip1 domain family, member 4	AK009618|Yipf4|67864|Yip1 domain family, member 4	AK083301|Yipf4|67864|Yip1 domain family, member 4	NM_026417|Yipf4|67864|Yip1 domain family, member 4	AK017721|Yipf4|67864|Yip1 domain family, member 4	AK017722|Yipf4|67864|Yip1 domain family, member 4	AK159227|Yipf4|67864|Yip1 domain family, member 4	BC003936|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr5_+_144670857_144670916	0.153035	FOXD3.p2	AK146365|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC139774|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC066110|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	NM_008886|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC058189|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK014190|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK017847|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK034866|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC086637|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC141287|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC022179|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK083049|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC083502|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC110684|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)
mm9_v1_chr3_-_63733305_63733317	0.152468	FOXD3.p2	AK087526|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	NM_177856|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chrX_-_72625260_72625379	0.152269	FOXD3.p2	BC138347|F8|14069|coagulation factor VIII	BC145245|F8|14069|coagulation factor VIII	L05573|F8|14069|coagulation factor VIII	NM_001161373|F8|14069|coagulation factor VIII	NM_001161374|F8|14069|coagulation factor VIII	NM_007977|F8|14069|coagulation factor VIII
mm9_v1_chr13_+_47289371_47289389	0.152161	FOXD3.p2	AK052846|Rnf144b|218215|ring finger protein 144B	NM_001170643|Rnf144b|218215|ring finger protein 144B	AK040939|Rnf144b|218215|ring finger protein 144B	BC025007|Rnf144b|218215|ring finger protein 144B
mm9_v1_chrX_-_50622974_50623027	0.151906	FOXD3.p2	AK036417|Fam122b|78755|family with sequence similarity 122, member B	AK044896|Fam122b|78755|family with sequence similarity 122, member B	NM_001166365|Fam122b|78755|family with sequence similarity 122, member B	NM_001166583|Fam122b|78755|family with sequence similarity 122, member B	NM_030167|Fam122b|78755|family with sequence similarity 122, member B
mm9_v1_chr9_+_96096690_96096766	0.151353	FOXD3.p2	AK044784|Tfdp2|211586|transcription factor Dp 2	NM_001184706|Tfdp2|211586|transcription factor Dp 2	NM_001184708|Tfdp2|211586|transcription factor Dp 2	NM_178667|Tfdp2|211586|transcription factor Dp 2	AK029055|Tfdp2|211586|transcription factor Dp 2	AK053881|Tfdp2|211586|transcription factor Dp 2	AK162972|Tfdp2|211586|transcription factor Dp 2	AK079624|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr15_+_81494352_81494363	0.150669	FOXD3.p2	AK146632|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr1_-_164478475_164478591	0.150191	FOXD3.p2	BC014872|Mettl13|71449|methyltransferase like 13	NM_144877|Mettl13|71449|methyltransferase like 13
mm9_v1_chr2_-_125549883_125549883	0.149531	FOXD3.p2	AK036946|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4	NM_199022|Shc4|271849|SHC (Src homology 2 domain containing) family, member 4
mm9_v1_chr9_+_92352215_92352231	0.149481	FOXD3.p2	AK035919|Plscr4|235527|phospholipid scramblase 4	AK045372|Plscr4|235527|phospholipid scramblase 4	AK165919|Plscr4|235527|phospholipid scramblase 4	NM_178711|Plscr4|235527|phospholipid scramblase 4	AK035878|Plscr4|235527|phospholipid scramblase 4
mm9_v1_chr9_+_110255447_110255486	0.149439	FOXD3.p2	
mm9_v1_chr9_+_54711492_54711604	0.148584	FOXD3.p2	NM_022655|Ireb2|64602|iron responsive element binding protein 2	BC044665|Ireb2|64602|iron responsive element binding protein 2
mm9_v1_chr8_-_108375786_108375962	0.147877	FOXD3.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr8_+_34842810_34842810	0.147485	FOXD3.p2	NM_001167922|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr5_+_16078748_16078768	0.147376	FOXD3.p2	AK164241|Hgf|15234|hepatocyte growth factor
mm9_v1_chr7_+_136735365_136735478	0.147345	FOXD3.p2	NM_172255|Wdr11|207425|WD repeat domain 11	AK166369|Wdr11|207425|WD repeat domain 11	AK170058|Wdr11|207425|WD repeat domain 11	BC037177|Wdr11|207425|WD repeat domain 11
mm9_v1_chr8_+_24168730_24168785	0.14705	FOXD3.p2	AK147483|Ank1|11733|ankyrin 1, erythroid	NM_031158|Ank1|11733|ankyrin 1, erythroid	X69063|Ank1|11733|ankyrin 1, erythroid	AK147597|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr9_+_96019793_96019850	0.146988	FOXD3.p2	AK160477|Gk5|235533|glycerol kinase 5 (putative)	AK076293|Gk5|235533|glycerol kinase 5 (putative)	AK167217|Gk5|235533|glycerol kinase 5 (putative)	AK049275|Gk5|235533|glycerol kinase 5 (putative)	AK162119|Gk5|235533|glycerol kinase 5 (putative)	NM_177352|Gk5|235533|glycerol kinase 5 (putative)	AK163031|Gk5|235533|glycerol kinase 5 (putative)	BC116302|Gk5|235533|glycerol kinase 5 (putative)	BC116303|Gk5|235533|glycerol kinase 5 (putative)
mm9_v1_chr15_-_99609550_99609679	0.146903	FOXD3.p2	AK218310|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr19_-_39887217_39887303	0.146772	FOXD3.p2	AF047727|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139471|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139472|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	NM_010004|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40
mm9_v1_chr8_-_74958975_74959054	0.146611	FOXD3.p2	AK018263|Calr3|73316|calreticulin 3	AK046081|Calr3|73316|calreticulin 3	NM_029782|Calr3|73316|calreticulin 3
mm9_v1_chr3_+_105762363_105762420	0.145952	FOXD3.p2	AK078856|Wdr77|70465|WD repeat domain 77	AK048488|Wdr77|70465|WD repeat domain 77	AK168752|Wdr77|70465|WD repeat domain 77	AK050391|Wdr77|70465|WD repeat domain 77	AK168006|Wdr77|70465|WD repeat domain 77	NM_027432|Wdr77|70465|WD repeat domain 77	AK169128|Wdr77|70465|WD repeat domain 77	AK163839|Wdr77|70465|WD repeat domain 77
mm9_v1_chr2_-_84490827_84490896	0.144804	FOXD3.p2	BC054544|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	BC043108|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK161790|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK164485|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	AK168453|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085448|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085449|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_001085450|Ctnnd1|12388|catenin (cadherin associated protein), delta 1	NM_007615|Ctnnd1|12388|catenin (cadherin associated protein), delta 1
mm9_v1_chr1_+_90303576_90303673	0.144455	FOXD3.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr8_+_63702967_63703040	0.144441	FOXD3.p2	NM_021506|Sh3rf1|59009|SH3 domain containing ring finger 1	BC060113|Sh3rf1|59009|SH3 domain containing ring finger 1	BC060696|Sh3rf1|59009|SH3 domain containing ring finger 1	AK088003|Sh3rf1|59009|SH3 domain containing ring finger 1	AK148137|Sh3rf1|59009|SH3 domain containing ring finger 1
mm9_v1_chr10_-_127986187_127986227	0.144233	FOXD3.p2	NM_018860|Rpl41|67945|ribosomal protein L41
mm9_v1_chr7_+_86040793_86040943	0.143564	FOXD3.p2	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr2_-_93662687_93662734	0.143261	FOXD3.p2	BC006597|Ext2|14043|exostoses (multiple) 2	U67837|Ext2|14043|exostoses (multiple) 2	U72141|Ext2|14043|exostoses (multiple) 2	AK152265|Ext2|14043|exostoses (multiple) 2	AK152840|Ext2|14043|exostoses (multiple) 2	AK082572|Ext2|14043|exostoses (multiple) 2	AK084772|Ext2|14043|exostoses (multiple) 2	AK164342|Ext2|14043|exostoses (multiple) 2	AK148090|Ext2|14043|exostoses (multiple) 2	AK150155|Ext2|14043|exostoses (multiple) 2	NM_010163|Ext2|14043|exostoses (multiple) 2
mm9_v1_chr5_+_125002866_125002933	0.143071	FOXD3.p2	AK154422|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_001190795|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_026409|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK167149|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK012782|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK077525|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK129402|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK033741|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117786|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117787|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC043052|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK017554|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
mm9_v1_chr13_+_54167169_54167276	0.142943	FOXD3.p2	AK012650|Sfxn1|14057|sideroflexin 1	NM_027324|Sfxn1|14057|sideroflexin 1	AF325260|Sfxn1|14057|sideroflexin 1	BC005743|Sfxn1|14057|sideroflexin 1	AK151110|Sfxn1|14057|sideroflexin 1
mm9_v1_chr2_+_127034130_127034141	0.142581	FOXD3.p2	AK039567|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	BC063261|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)	NM_177214|Snrnp200|320632|small nuclear ribonucleoprotein 200 (U5)
mm9_v1_chr11_+_62692956_62692968	0.142447	FOXD3.p2	AK050027|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr9_-_36446186_36446186	0.142121	FOXD3.p2	AK144443|A630095E13Rik|235973|RIKEN cDNA A630095E13 gene	NM_001033325|A630095E13Rik|235973|RIKEN cDNA A630095E13 gene
mm9_v1_chr3_+_92143061_92143080	0.14144	FOXD3.p2	AK008778|Sprr2d|20758|small proline-rich protein 2D	AY158988|Sprr2d|20758|small proline-rich protein 2D	NM_011470|Sprr2d|20758|small proline-rich protein 2D	AJ005562|Sprr2d|20758|small proline-rich protein 2D	BC111436|Sprr2d|20758|small proline-rich protein 2D
mm9_v1_chr12_+_111805938_111806039	0.140049	FOXD3.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr7_+_25655075_25655144	0.14001	FOXD3.p2	BC100434|Dmrtc2|71241|doublesex and mab-3 related transcription factor like family C2	NM_027732|Dmrtc2|71241|doublesex and mab-3 related transcription factor like family C2	AF542046|Dmrtc2|71241|doublesex and mab-3 related transcription factor like family C2	AK017020|Dmrtc2|71241|doublesex and mab-3 related transcription factor like family C2	BC138203|Dmrtc2|71241|doublesex and mab-3 related transcription factor like family C2	BC145988|Dmrtc2|71241|doublesex and mab-3 related transcription factor like family C2
mm9_v1_chr2_-_114480618_114480699	0.139719	FOXD3.p2	AK006965|Atpbd4|66632|ATP binding domain 4	AK017595|Atpbd4|66632|ATP binding domain 4	AK145789|Atpbd4|66632|ATP binding domain 4	AK033888|Atpbd4|66632|ATP binding domain 4	AK088160|Atpbd4|66632|ATP binding domain 4	NM_025675|Atpbd4|66632|ATP binding domain 4	AK007021|Atpbd4|66632|ATP binding domain 4	BC022995|Atpbd4|66632|ATP binding domain 4	AK036021|Atpbd4|66632|ATP binding domain 4	AK082013|Atpbd4|66632|ATP binding domain 4
mm9_v1_chr6_+_100654716_100654748	0.139438	FOXD3.p2	BC049816|Gxylt2|232313|glucoside xylosyltransferase 2	NM_198612|Gxylt2|232313|glucoside xylosyltransferase 2	AK144790|Gxylt2|232313|glucoside xylosyltransferase 2
mm9_v1_chr11_-_99283568_99283572	0.13927	FOXD3.p2	BC131911|Krt12|268482|keratin 12	AK143182|Krt12|268482|keratin 12	U02880|Krt12|268482|keratin 12	AK053362|Krt12|268482|keratin 12	NM_010661|Krt12|268482|keratin 12
mm9_v1_chr1_-_165243608_165243611	0.138835	FOXD3.p2	AK089006|Prrx1|18933|paired related homeobox 1
mm9_v1_chr12_+_82047269_82047362	0.137679	FOXD3.p2	AK088358|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr14_-_65671577_65671651	0.137458	FOXD3.p2	BC038525|Extl3|54616|exostoses (multiple)-like 3
mm9_v1_chr4_-_41464365_41464365	0.137222	FOXD3.p2	AB231294|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene	NM_001048005|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene
mm9_v1_chrX_+_133461863_133461872	0.137095	FOXD3.p2	AK005982|1700014N06Rik|69389|RIKEN cDNA 1700014N06 gene	NM_027067|1700014N06Rik|69389|RIKEN cDNA 1700014N06 gene	BC117076|1700014N06Rik|69389|RIKEN cDNA 1700014N06 gene	BC117080|1700014N06Rik|69389|RIKEN cDNA 1700014N06 gene
mm9_v1_chrX_+_33868347_33868594	0.136404	FOXD3.p2	AK167341|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK016522|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK147751|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	NM_028894|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120688|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120690|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK030866|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3
mm9_v1_chr16_+_20717874_20717914	0.136317	FOXD3.p2	AK146429|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	AK161617|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	BC002306|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	NM_145632|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	BC125612|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H	BC125638|Polr2h|245841|polymerase (RNA) II (DNA directed) polypeptide H
mm9_v1_chr2_-_140215417_140215459	0.135483	FOXD3.p2	BC150948|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK131753|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK132650|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_001033296|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK016809|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)
mm9_v1_chr18_-_62915799_62916000	0.134837	FOXD3.p2	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr6_+_126889979_126890004	0.134697	FOXD3.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr6_-_90023011_90023011	0.134581	FOXD3.p2	AF132114|Vmn1r49|24112|vomeronasal 1, receptor 49	NM_011911|Vmn1r49|24112|vomeronasal 1, receptor 49
mm9_v1_chr17_+_88524851_88524851	0.134389	FOXD3.p2	AK139504|Gm4832|225058|predicted gene 4832	NM_001190356|Gm4832|225058|predicted gene 4832
mm9_v1_chr4_-_11181335_11181349	0.134125	FOXD3.p2	BC049092|Ints8|72656|integrator complex subunit 8	BC057618|Ints8|72656|integrator complex subunit 8
mm9_v1_chr18_+_78021267_78021344	0.134046	FOXD3.p2	
mm9_v1_chr9_+_20016650_20016744	0.133945	FOXD3.p2	NM_146903|Olfr871|258905|olfactory receptor 871	BC119201|Olfr871|258905|olfactory receptor 871	BC119203|Olfr871|258905|olfactory receptor 871
mm9_v1_chr15_-_83341285_83341349	0.133528	FOXD3.p2	BC010510|Ttll1|319953|tubulin tyrosine ligase-like 1	AK084005|Ttll1|319953|tubulin tyrosine ligase-like 1	AK140472|Ttll1|319953|tubulin tyrosine ligase-like 1	AK031917|Ttll1|319953|tubulin tyrosine ligase-like 1	AK168786|Ttll1|319953|tubulin tyrosine ligase-like 1	AK047046|Ttll1|319953|tubulin tyrosine ligase-like 1	AK169150|Ttll1|319953|tubulin tyrosine ligase-like 1	NM_178869|Ttll1|319953|tubulin tyrosine ligase-like 1
mm9_v1_chr3_-_130951398_130951434	0.133366	FOXD3.p2	AK169238|Hadh|15107|hydroxyacyl-Coenzyme A dehydrogenase
mm9_v1_chr4_-_141402189_141402273	0.133084	FOXD3.p2	AK007772|Ctrc|76701|chymotrypsin C (caldecrin)	BC103715|Ctrc|76701|chymotrypsin C (caldecrin)	BC115516|Ctrc|76701|chymotrypsin C (caldecrin)	BC115517|Ctrc|76701|chymotrypsin C (caldecrin)	NM_001033875|Ctrc|76701|chymotrypsin C (caldecrin)
mm9_v1_chr10_+_12728252_12728328	0.132066	FOXD3.p2	NM_175102|Sf3b5|66125|splicing factor 3b, subunit 5	BC006603|Sf3b5|66125|splicing factor 3b, subunit 5	AK010348|Sf3b5|66125|splicing factor 3b, subunit 5	AK003475|Sf3b5|66125|splicing factor 3b, subunit 5	AK009874|Sf3b5|66125|splicing factor 3b, subunit 5
mm9_v1_chr13_-_3803547_3803563	0.130226	FOXD3.p2	BC005457|Calml3|70405|calmodulin-like 3	AK010118|Calml3|70405|calmodulin-like 3	NM_027416|Calml3|70405|calmodulin-like 3
mm9_v1_chr1_-_55283189_55283376	0.129816	FOXD3.p2	BC026871|Rftn2|74013|raftlin family member 2	AK014318|Rftn2|74013|raftlin family member 2
mm9_v1_chr1_+_111880313_111880391	0.129732	FOXD3.p2	AK034096|Cdh7|241201|cadherin 7, type 2	NM_172853|Cdh7|241201|cadherin 7, type 2	AK137369|Cdh7|241201|cadherin 7, type 2
mm9_v1_chr6_-_28084368_28084420	0.129594	FOXD3.p2	BC051384|Grm8|14823|glutamate receptor, metabotropic 8	NM_008174|Grm8|14823|glutamate receptor, metabotropic 8	AK038395|Grm8|14823|glutamate receptor, metabotropic 8
mm9_v1_chr8_-_114400574_114400649	0.129236	FOXD3.p2	AK018496|Tmem170|66817|transmembrane protein 170	NM_025781|Tmem170|66817|transmembrane protein 170	AK007926|Tmem170|66817|transmembrane protein 170	BC139377|Tmem170|66817|transmembrane protein 170	BC145964|Tmem170|66817|transmembrane protein 170
mm9_v1_chr17_-_33961403_33961506	0.129103	FOXD3.p2	U11248|Rps28|54127|ribosomal protein S28	BC010987|Rps28|54127|ribosomal protein S28	AK002919|Rps28|54127|ribosomal protein S28	BC090982|Rps28|54127|ribosomal protein S28	NM_016844|Rps28|54127|ribosomal protein S28	BC125644|Rps28|54127|ribosomal protein S28	BC125646|Rps28|54127|ribosomal protein S28
mm9_v1_chr2_+_48669677_48669740	0.128377	FOXD3.p2	AK050252|Acvr2a|11480|activin receptor IIA	AK143186|Acvr2a|11480|activin receptor IIA
mm9_v1_chr8_-_11635748_11635782	0.128295	FOXD3.p2	AK031808|Ankrd10|102334|ankyrin repeat domain 10	AK033623|Ankrd10|102334|ankyrin repeat domain 10	AK038156|Ankrd10|102334|ankyrin repeat domain 10	AK042500|Ankrd10|102334|ankyrin repeat domain 10	AK081754|Ankrd10|102334|ankyrin repeat domain 10	AK082875|Ankrd10|102334|ankyrin repeat domain 10	AK084456|Ankrd10|102334|ankyrin repeat domain 10	AK143253|Ankrd10|102334|ankyrin repeat domain 10	NM_001167967|Ankrd10|102334|ankyrin repeat domain 10	NM_133971|Ankrd10|102334|ankyrin repeat domain 10	AK050983|Ankrd10|102334|ankyrin repeat domain 10
mm9_v1_chrX_+_20126893_20126943	0.127868	FOXD3.p2	AK146465|Rgn|19733|regucalcin	BC012710|Rgn|19733|regucalcin	NM_009060|Rgn|19733|regucalcin	U28937|Rgn|19733|regucalcin
mm9_v1_chr18_-_34911152_34911201	0.126773	FOXD3.p2	U15562|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	L16926|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK168287|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK141737|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	NM_009860|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AF347115|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)
mm9_v1_chr5_-_22056086_22056211	0.126073	FOXD3.p2	AK166537|Orc5|26429|origin recognition complex, subunit 5	AK169683|Orc5|26429|origin recognition complex, subunit 5	AJ007360|Orc5|26429|origin recognition complex, subunit 5	AK144983|Orc5|26429|origin recognition complex, subunit 5	NM_011959|Orc5|26429|origin recognition complex, subunit 5	AK165912|Orc5|26429|origin recognition complex, subunit 5	BC006927|Orc5|26429|origin recognition complex, subunit 5	AK084683|Orc5|26429|origin recognition complex, subunit 5
mm9_v1_chr9_+_117161650_117161701	0.125981	FOXD3.p2	
mm9_v1_chr4_-_61100653_61100734	0.125827	FOXD3.p2	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2
mm9_v1_chr17_-_35301810_35301835	0.124664	FOXD3.p2	NM_001199044|Prrc2a|53761|proline-rich coiled-coil 2A	NM_020027|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr2_+_152241322_152241322	0.12453	FOXD3.p2	AK078482|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene	NM_177656|6820408C15Rik|228778|RIKEN cDNA 6820408C15 gene
mm9_v1_chr10_+_62487259_62487259	0.124487	FOXD3.p2	AK014198|Pbld2|67307|phenazine biosynthesis-like protein domain containing 2	NM_026085|Pbld2|67307|phenazine biosynthesis-like protein domain containing 2
mm9_v1_chr6_-_106698941_106699030	0.124475	FOXD3.p2	AK138923|Il5ra|16192|interleukin 5 receptor, alpha	D90205|Il5ra|16192|interleukin 5 receptor, alpha	NM_008370|Il5ra|16192|interleukin 5 receptor, alpha
mm9_v1_chr4_+_126430787_126430838	0.124432	FOXD3.p2	AK049570|AU040320|100317|expressed sequence AU040320	NM_001035525|AU040320|100317|expressed sequence AU040320	AK084668|AU040320|100317|expressed sequence AU040320	AK172674|AU040320|100317|expressed sequence AU040320
mm9_v1_chr7_-_20960758_20960758	0.123951	FOXD3.p2	NM_001166713|Gm5728|435949|predicted gene 5728	NM_001166751|Gm8660|667485|predicted gene 8660
mm9_v1_chr3_-_95686120_95686174	0.123733	FOXD3.p2	AK156084|Gm129|229599|predicted gene 129	AK164001|Gm129|229599|predicted gene 129	NM_001033302|Gm129|229599|predicted gene 129
mm9_v1_chr6_-_130256444_130256498	0.123132	FOXD3.p2	AF204265|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204266|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204267|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204268|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	BC099861|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF074460|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF283250|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283251|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283252|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF307947|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF307948|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	NM_010646|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12
mm9_v1_chr11_-_3333979_3333985	0.123111	FOXD3.p2	AK165895|Rnf185|193670|ring finger protein 185
mm9_v1_chrX_+_160577257_160577273	0.123089	FOXD3.p2	NM_001130513|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chr14_-_14953416_14953474	0.12278	FOXD3.p2	BC006869|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_025550|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK002343|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK010287|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AJ252147|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
mm9_v1_chr17_+_32421723_32421761	0.122761	FOXD3.p2	
mm9_v1_chr5_-_130731280_130731426	0.121615	FOXD3.p2	AK005079|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK019228|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK168847|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	BC003849|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	NM_023248|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK014648|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	X99668|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)
mm9_v1_chr5_-_65844386_65844460	0.121426	FOXD3.p2	BC029314|1110003E01Rik|68552|RIKEN cDNA 1110003E01 gene
mm9_v1_chr2_+_34262387_34262397	0.121071	FOXD3.p2	BC096618|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr10_+_82359714_82359858	0.120921	FOXD3.p2	AK007891|Txnrd1|50493|thioredoxin reductase 1	AK202828|Txnrd1|50493|thioredoxin reductase 1	AK204569|Txnrd1|50493|thioredoxin reductase 1	AK217830|Txnrd1|50493|thioredoxin reductase 1	AK194198|Txnrd1|50493|thioredoxin reductase 1	AK203123|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr8_+_107355500_107355543	0.12085	FOXD3.p2	BC015286|Ces2b|234669|carboxyesterase 2B	BC044835|Ces2b|234669|carboxyesterase 2B	BC058815|Ces2b|234669|carboxyesterase 2B	NM_198171|Ces2b|234669|carboxyesterase 2B
mm9_v1_chr5_+_136533136_136533238	0.120443	FOXD3.p2	BC115563|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene	BC115564|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene	NM_027158|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene	BC099515|2310043J07Rik|69665|RIKEN cDNA 2310043J07 gene
mm9_v1_chr13_+_31898612_31898654	0.119607	FOXD3.p2	AK144420|Foxc1|17300|forkhead box C1
mm9_v1_chr14_+_45949451_45949542	0.119195	FOXD3.p2	AK012174|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC116752|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC119168|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	NM_025959|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK144728|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK014354|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC037099|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK166961|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC043044|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC057997|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6
mm9_v1_chr17_+_56724423_56724443	0.118504	FOXD3.p2	BC018200|Safb|224903|scaffold attachment factor B
mm9_v1_chr14_-_47896464_47896499	0.118464	FOXD3.p2	BC063740|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK042443|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1	AK036390|Wdhd1|218973|WD repeat and HMG-box DNA binding protein 1
mm9_v1_chr7_+_63305516_63305584	0.118364	FOXD3.p2	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr9_-_45636638_45636736	0.118105	FOXD3.p2	AK158671|Cep164|214552|centrosomal protein 164	NM_001081373|Cep164|214552|centrosomal protein 164
mm9_v1_chr9_+_44205032_44205053	0.117573	FOXD3.p2	AK147849|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr7_-_29910144_29910197	0.117056	FOXD3.p2	D21796|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AY268935|Ryr1|20190|ryanodine receptor 1, skeletal muscle	NM_009109|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK081432|Ryr1|20190|ryanodine receptor 1, skeletal muscle	AK143310|Ryr1|20190|ryanodine receptor 1, skeletal muscle
mm9_v1_chr2_+_152106052_152106158	0.117048	FOXD3.p2	AK042898|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide
mm9_v1_chr17_-_15635203_15635292	0.116886	FOXD3.p2	AK077520|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK132161|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	NM_011185|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	BC018351|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	X80686|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	U60824|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK167647|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1	AK028265|Psmb1|19170|proteasome (prosome, macropain) subunit, beta type 1
mm9_v1_chr1_-_160286359_160286472	0.116722	FOXD3.p2	BC067038|Fam5b|240843|family with sequence similarity 5, member B	BC076572|Fam5b|240843|family with sequence similarity 5, member B	NM_207583|Fam5b|240843|family with sequence similarity 5, member B	AK032297|Fam5b|240843|family with sequence similarity 5, member B	AK047824|Fam5b|240843|family with sequence similarity 5, member B	AK122549|Fam5b|240843|family with sequence similarity 5, member B
mm9_v1_chr7_-_52317021_52317119	0.116409	FOXD3.p2	BC025098|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2	NM_022999|Prrg2|65116|proline-rich Gla (G-carboxyglutamic acid) polypeptide 2
mm9_v1_chr3_+_54496726_54496818	0.114515	FOXD3.p2	AK171787|Fam48a|56790|family with sequence similarity 48, member A	AK045110|Fam48a|56790|family with sequence similarity 48, member A	AK050619|Fam48a|56790|family with sequence similarity 48, member A	AK083379|Fam48a|56790|family with sequence similarity 48, member A
mm9_v1_chr16_+_16870955_16870979	0.114448	FOXD3.p2	AK146475|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr17_+_36054140_36054142	0.11421	FOXD3.p2	BC052059|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	NM_001163818|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10	AJ504718|Ppp1r10|52040|protein phosphatase 1, regulatory subunit 10
mm9_v1_chr1_+_39044599_39044675	0.114142	FOXD3.p2	AK168509|Pdcl3|68833|phosducin-like 3	BC005601|Pdcl3|68833|phosducin-like 3	AK078372|Pdcl3|68833|phosducin-like 3	NM_026850|Pdcl3|68833|phosducin-like 3	AK004334|Pdcl3|68833|phosducin-like 3	AK169572|Pdcl3|68833|phosducin-like 3
mm9_v1_chr13_-_21875234_21875270	0.113931	FOXD3.p2	BC107287|Hist1h3i|319153|histone cluster 1, H3i	BC127148|Hist1h3i|319153|histone cluster 1, H3i	BC116383|Hist1h3i|319153|histone cluster 1, H3i	AK155722|Hist1h3i|319153|histone cluster 1, H3i	NM_178207|Hist1h3i|319153|histone cluster 1, H3i
mm9_v1_chr14_+_75642093_75642165	0.113844	FOXD3.p2	AF164524|Cpb2|56373|carboxypeptidase B2 (plasma)	NM_019775|Cpb2|56373|carboxypeptidase B2 (plasma)	AK004045|Cpb2|56373|carboxypeptidase B2 (plasma)	BC089577|Cpb2|56373|carboxypeptidase B2 (plasma)	AB021968|Cpb2|56373|carboxypeptidase B2 (plasma)	AF186188|Cpb2|56373|carboxypeptidase B2 (plasma)
mm9_v1_chr11_-_107209443_107209486	0.113742	FOXD3.p2	AK021206|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr14_-_46008425_46008617	0.113527	FOXD3.p2	BC092047|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	BC031116|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK018499|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK050266|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AJ001006|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	NM_019425|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007722|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK167870|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK168074|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007647|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK008566|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK002466|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK028693|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK007764|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1	AK011098|Gnpnat1|54342|glucosamine-phosphate N-acetyltransferase 1
mm9_v1_chr10_-_80276236_80276250	0.112255	FOXD3.p2	AK009016|Jsrp1|71912|junctional sarcoplasmic reticulum protein 1	AK009578|Jsrp1|71912|junctional sarcoplasmic reticulum protein 1	NM_028001|Jsrp1|71912|junctional sarcoplasmic reticulum protein 1
mm9_v1_chr15_+_8918001_8918118	0.111873	FOXD3.p2	AK048152|Ranbp3l|223332|RAN binding protein 3-like	AK132406|Ranbp3l|223332|RAN binding protein 3-like	BC058706|Ranbp3l|223332|RAN binding protein 3-like	NM_198024|Ranbp3l|223332|RAN binding protein 3-like
mm9_v1_chr17_+_46565890_46565899	0.111848	FOXD3.p2	AF367970|Crip3|114570|cysteine-rich protein 3	AF367971|Crip3|114570|cysteine-rich protein 3	BC116360|Crip3|114570|cysteine-rich protein 3	BC116361|Crip3|114570|cysteine-rich protein 3	NM_053250|Crip3|114570|cysteine-rich protein 3	NM_181664|Crip3|114570|cysteine-rich protein 3	AK080272|Crip3|114570|cysteine-rich protein 3	AY555745|Crip3|114570|cysteine-rich protein 3
mm9_v1_chr9_-_61918412_61918412	0.111022	FOXD3.p2	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr8_-_112563233_112563253	0.110885	FOXD3.p2	AK009113|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4	NM_011998|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4	BC057886|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4
mm9_v1_chr7_+_3646102_3646199	0.110827	FOXD3.p2	NM_024168|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK053916|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	BC091756|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK010759|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	BC002205|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)	AK013253|Tsen34|66078|tRNA splicing endonuclease 34 homolog (S. cerevisiae)
mm9_v1_chr6_-_13788453_13788525	0.110321	FOXD3.p2	AK043090|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr15_-_91022165_91022189	0.110291	FOXD3.p2	BC019187|Abcd2|26874|ATP-binding cassette, sub-family D (ALD), member 2
mm9_v1_chr3_+_135488617_135488753	0.110242	FOXD3.p2	AK085740|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135149|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135150|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr6_+_48794000_48794090	0.110185	FOXD3.p2	AK180847|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr7_+_21947203_21947203	0.109963	FOXD3.p2	NM_001166707|Vmn1r123|384695|vomeronasal 1 receptor 123
mm9_v1_chr16_+_16870904_16870931	0.109564	FOXD3.p2	AB045324|Top3b|21976|topoisomerase (DNA) III beta
mm9_v1_chr17_-_80689434_80689517	0.109441	FOXD3.p2	BC079618|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC066091|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC065169|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	AK042947|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr13_-_3944594_3944594	0.10938	FOXD3.p2	AK148451|Ucn3|83428|urocortin 3	NM_031250|Ucn3|83428|urocortin 3
mm9_v1_chr9_-_103255690_103255706	0.109316	FOXD3.p2	
mm9_v1_chr7_-_13404178_13404219	0.108986	FOXD3.p2	BC139021|Zfp329|67230|zinc finger protein 329	BC139023|Zfp329|67230|zinc finger protein 329	BC072665|Zfp329|67230|zinc finger protein 329	AK013271|Zfp329|67230|zinc finger protein 329	AK014562|Zfp329|67230|zinc finger protein 329	AK051535|Zfp329|67230|zinc finger protein 329	NM_026046|Zfp329|67230|zinc finger protein 329
mm9_v1_chr14_+_67853446_67853480	0.108437	FOXD3.p2	BC050922|Ebf2|13592|early B-cell factor 2
mm9_v1_chr1_+_162908733_162908776	0.107587	FOXD3.p2	NM_080844|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	BC019447|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm9_v1_chr8_+_47620401_47620467	0.107467	FOXD3.p2	BC006692|Acsl1|14081|acyl-CoA synthetase long-chain family member 1
mm9_v1_chrX_+_130385690_130385739	0.107255	FOXD3.p2	AK014761|Tnmd|64103|tenomodulin	BC006919|Tnmd|64103|tenomodulin	AB055422|Tnmd|64103|tenomodulin
mm9_v1_chr11_-_23533535_23533548	0.107202	FOXD3.p2	AK029538|0610010F05Rik|71675|RIKEN cDNA 0610010F05 gene
mm9_v1_chr3_-_115417932_115417972	0.107161	FOXD3.p2	AK004591|S1pr1|13609|sphingosine-1-phosphate receptor 1	NM_007901|S1pr1|13609|sphingosine-1-phosphate receptor 1
mm9_v1_chr3_-_108229641_108229684	0.107102	FOXD3.p2	
mm9_v1_chr4_+_8534378_8534506	0.106908	FOXD3.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr3_-_143867852_143867939	0.106631	FOXD3.p2	AK080534|Lmo4|16911|LIM domain only 4	BC010278|Lmo4|16911|LIM domain only 4	AF096996|Lmo4|16911|LIM domain only 4
mm9_v1_chr17_+_12312128_12312218	0.106614	FOXD3.p2	AK005139|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	NM_026644|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	AK166917|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	BC047281|Agpat4|68262|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm9_v1_chr15_+_99984826_99984839	0.106577	FOXD3.p2	AK030064|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_172819|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137857|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137858|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm9_v1_chr7_+_104601713_104601713	0.106445	FOXD3.p2	AK145279|Kctd14|233529|potassium channel tetramerisation domain containing 14	AY899809|Kctd14|233529|potassium channel tetramerisation domain containing 14	NM_001010826|Kctd14|233529|potassium channel tetramerisation domain containing 14	NM_001012434|Kctd14|233529|potassium channel tetramerisation domain containing 14
mm9_v1_chr14_-_55136145_55136306	0.105793	FOXD3.p2	AK186126|Prmt5|27374|protein arginine N-methyltransferase 5	AF167573|Prmt5|27374|protein arginine N-methyltransferase 5	AK076346|Prmt5|27374|protein arginine N-methyltransferase 5	AK132414|Prmt5|27374|protein arginine N-methyltransferase 5	AK165165|Prmt5|27374|protein arginine N-methyltransferase 5	BC023905|Prmt5|27374|protein arginine N-methyltransferase 5	AK084106|Prmt5|27374|protein arginine N-methyltransferase 5	NM_013768|Prmt5|27374|protein arginine N-methyltransferase 5
mm9_v1_chr2_+_154026115_154026115	0.105183	FOXD3.p2	NM_153418|U46068|228801|cDNA sequence U46068	U46068|U46068|228801|cDNA sequence U46068
mm9_v1_chr3_+_123045975_123046085	0.104795	FOXD3.p2	BC038038|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)	BC049257|Sec24d|69608|Sec24 related gene family, member D (S. cerevisiae)
mm9_v1_chr4_+_98860798_98860903	0.104449	FOXD3.p2	NM_001145967|Atg4c|242557|autophagy-related 4C (yeast)	AK156463|Atg4c|242557|autophagy-related 4C (yeast)	AK134838|Atg4c|242557|autophagy-related 4C (yeast)	AK170747|Atg4c|242557|autophagy-related 4C (yeast)
mm9_v1_chr12_+_120681882_120681882	0.104399	FOXD3.p2	NM_001163136|Macc1|238455|metastasis associated in colon cancer 1
mm9_v1_chr12_-_86039703_86039802	0.104093	FOXD3.p2	AY993933|Tmem90a|627191|transmembrane protein 90a	AK140195|Tmem90a|627191|transmembrane protein 90a	NM_001033334|Tmem90a|627191|transmembrane protein 90a	AY993934|Tmem90a|627191|transmembrane protein 90a
mm9_v1_chr7_-_87065480_87065546	0.103922	FOXD3.p2	U91933|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	BC060236|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	BC028319|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK037336|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK028372|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK083911|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	AK150085|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit	NM_009682|Ap3s2|11778|adaptor-related protein complex 3, sigma 2 subunit
mm9_v1_chr5_-_23218477_23218493	0.103898	FOXD3.p2	AK089743|AI506816|433855|expressed sequence AI506816	AK157274|AI506816|433855|expressed sequence AI506816	AK161191|AI506816|433855|expressed sequence AI506816	AK088877|AI506816|433855|expressed sequence AI506816	AK151523|AI506816|433855|expressed sequence AI506816
mm9_v1_chr1_+_129765349_129765386	0.103743	FOXD3.p2	NM_178690|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK172881|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK035603|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK076399|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK080432|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK134604|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK164523|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK170768|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	BC046297|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1	AK076244|Rab3gap1|226407|RAB3 GTPase activating protein subunit 1
mm9_v1_chr4_-_86876311_86876327	0.103532	FOXD3.p2	AK038634|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK034424|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AK083127|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr14_-_44749035_44749035	0.10264	FOXD3.p2	AK015686|4930503E14Rik|74954|RIKEN cDNA 4930503E14 gene	NM_029131|4930503E14Rik|74954|RIKEN cDNA 4930503E14 gene
mm9_v1_chr18_+_36919868_36919931	0.102423	FOXD3.p2	AK146093|Wdr55|67936|WD repeat domain 55	AK075958|Wdr55|67936|WD repeat domain 55	NM_026464|Wdr55|67936|WD repeat domain 55	BC131932|Wdr55|67936|WD repeat domain 55	BC131934|Wdr55|67936|WD repeat domain 55	AK018469|Wdr55|67936|WD repeat domain 55	AK017695|Wdr55|67936|WD repeat domain 55	BC064750|Wdr55|67936|WD repeat domain 55
mm9_v1_chr15_+_76124863_76124863	0.102374	FOXD3.p2	GU144514|Gm10345|100041269|predicted gene 10345	NM_001195537|Gm10345|100041269|predicted gene 10345
mm9_v1_chr10_+_29033305_29033440	0.101539	FOXD3.p2	NM_025855|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK145162|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK016260|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK166660|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK166589|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK166634|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK028775|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	AK006444|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1	BC066183|Echdc1|52665|enoyl Coenzyme A hydratase domain containing 1
mm9_v1_chr11_+_80196766_80196898	0.101465	FOXD3.p2	AK087885|Zfp207|22680|zinc finger protein 207	NM_001130169|Zfp207|22680|zinc finger protein 207	NM_001130170|Zfp207|22680|zinc finger protein 207	NM_001130171|Zfp207|22680|zinc finger protein 207	NM_011751|Zfp207|22680|zinc finger protein 207	AK140139|Zfp207|22680|zinc finger protein 207	AK146787|Zfp207|22680|zinc finger protein 207	AK159683|Zfp207|22680|zinc finger protein 207	AK033497|Zfp207|22680|zinc finger protein 207	BC003715|Zfp207|22680|zinc finger protein 207	AB013357|Zfp207|22680|zinc finger protein 207	AB032196|Zfp207|22680|zinc finger protein 207
mm9_v1_chr3_+_94938009_94938098	0.100448	FOXD3.p2	AK154180|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	NM_153121|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	BC024838|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	AK054348|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	AK011517|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1
mm9_v1_chr15_-_96529998_96530181	0.100029	FOXD3.p2	BC041108|Slc38a2|67760|solute carrier family 38, member 2	BC027259|Slc38a2|67760|solute carrier family 38, member 2	AK129342|Slc38a2|67760|solute carrier family 38, member 2	BC048178|Slc38a2|67760|solute carrier family 38, member 2	NM_175121|Slc38a2|67760|solute carrier family 38, member 2	AK017145|Slc38a2|67760|solute carrier family 38, member 2	AK030917|Slc38a2|67760|solute carrier family 38, member 2	AK031615|Slc38a2|67760|solute carrier family 38, member 2	AK047403|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr17_-_20185168_20185168	0.0990208	FOXD3.p2	NM_001104566|Vmn2r104|22313|vomeronasal 2, receptor 104
mm9_v1_chr17_-_28697643_28697658	0.0959179	FOXD3.p2	BC042935|Clps|109791|colipase, pancreatic	AF414676|Clps|109791|colipase, pancreatic	AF414677|Clps|109791|colipase, pancreatic	AK028141|Clps|109791|colipase, pancreatic	AK008635|Clps|109791|colipase, pancreatic	AK008834|Clps|109791|colipase, pancreatic	AK008839|Clps|109791|colipase, pancreatic	AK008874|Clps|109791|colipase, pancreatic	AK008879|Clps|109791|colipase, pancreatic	AK019005|Clps|109791|colipase, pancreatic	AK019047|Clps|109791|colipase, pancreatic	AK008815|Clps|109791|colipase, pancreatic	NM_025469|Clps|109791|colipase, pancreatic
mm9_v1_chr10_+_58834161_58834363	0.0955698	FOXD3.p2	AK178926|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	AK212609|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
mm9_v1_chr12_+_66137309_66137322	0.0950998	FOXD3.p2	AK154170|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)	NM_177806|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm9_v1_chr15_-_51823257_51823330	0.0948936	FOXD3.p2	AK145591|Rad21|19357|RAD21 homolog (S. pombe)	AK168718|Rad21|19357|RAD21 homolog (S. pombe)	NM_009009|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr7_-_21883531_21883531	0.0940078	FOXD3.p2	NM_001166741|Vmn1r121|667240|vomeronasal 1 receptor 121
mm9_v1_chr14_-_56402855_56402888	0.0938952	FOXD3.p2	AF442771|Adcy4|104110|adenylate cyclase 4	BC015299|Adcy4|104110|adenylate cyclase 4	NM_080435|Adcy4|104110|adenylate cyclase 4	AK161880|Adcy4|104110|adenylate cyclase 4	AK141767|Adcy4|104110|adenylate cyclase 4
mm9_v1_chr11_+_50191220_50191290	0.0935992	FOXD3.p2	NM_021510|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	BC016459|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	AK052983|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	AK088169|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	Y14196|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	BC042187|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1	BC056224|Hnrnph1|59013|heterogeneous nuclear ribonucleoprotein H1
mm9_v1_chr3_-_35899453_35899599	0.0935959	FOXD3.p2	AK178493|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK168589|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AF310338|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK032203|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK007782|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	BC021382|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	AK031072|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)	NM_023644|Mccc1|72039|methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)
mm9_v1_chr7_+_150238718_150238934	0.0935063	FOXD3.p2	AK190176|Cd81|12520|CD81 antigen	X59047|Cd81|12520|CD81 antigen
mm9_v1_chr14_-_51766415_51766443	0.093309	FOXD3.p2	M27814|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	BC030036|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	AK075775|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	NM_011271|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)
mm9_v1_chr5_-_108026593_108026666	0.0920392	FOXD3.p2	BC003446|Glmn|170823|glomulin, FKBP associated protein	AK172659|Glmn|170823|glomulin, FKBP associated protein	AK165661|Glmn|170823|glomulin, FKBP associated protein	AK169045|Glmn|170823|glomulin, FKBP associated protein	NM_001161739|Glmn|170823|glomulin, FKBP associated protein	NM_133248|Glmn|170823|glomulin, FKBP associated protein
mm9_v1_chr13_+_41746130_41746130	0.0918974	FOXD3.p2	BC098182|Gm5082|328231|predicted gene 5082	NM_001145878|Gm5082|328231|predicted gene 5082
mm9_v1_chr7_+_130267661_130267769	0.0915893	FOXD3.p2	AK147327|Tnrc6a|233833|trinucleotide repeat containing 6a	AK008599|Tnrc6a|233833|trinucleotide repeat containing 6a	BC026849|Tnrc6a|233833|trinucleotide repeat containing 6a	AK083848|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr19_-_4059293_4059472	0.0894031	FOXD3.p2	BC021614|BC021614|225884|cDNA sequence BC021614	NM_144869|BC021614|225884|cDNA sequence BC021614	BC034269|BC021614|225884|cDNA sequence BC021614
mm9_v1_chr7_-_31319977_31320096	0.0884839	FOXD3.p2	BC065166|Arhgap33|233071|Rho GTPase activating protein 33	BC065086|Arhgap33|233071|Rho GTPase activating protein 33	NM_178252|Arhgap33|233071|Rho GTPase activating protein 33	BC066047|Arhgap33|233071|Rho GTPase activating protein 33	AK142180|Arhgap33|233071|Rho GTPase activating protein 33
mm9_v1_chr5_+_114870772_114870878	0.0883805	FOXD3.p2	
mm9_v1_chr4_-_135609279_135609318	0.0882648	FOXD3.p2	AK011211|Rpl11|67025|ribosomal protein L11	AK011800|Rpl11|67025|ribosomal protein L11	AK169053|Rpl11|67025|ribosomal protein L11	AK002998|Rpl11|67025|ribosomal protein L11	AK008422|Rpl11|67025|ribosomal protein L11	AK013923|Rpl11|67025|ribosomal protein L11	AK014593|Rpl11|67025|ribosomal protein L11	AK153486|Rpl11|67025|ribosomal protein L11	AK164445|Rpl11|67025|ribosomal protein L11	NM_025919|Rpl11|67025|ribosomal protein L11	AK088967|Rpl11|67025|ribosomal protein L11
mm9_v1_chr3_+_96433850_96433878	0.0878956	FOXD3.p2	NM_001102407|Rbm8a|60365|RNA binding motif protein 8a	NM_025875|Rbm8a|60365|RNA binding motif protein 8a	AK009953|Rbm8a|60365|RNA binding motif protein 8a	AK010284|Rbm8a|60365|RNA binding motif protein 8a	AK011215|Rbm8a|60365|RNA binding motif protein 8a	AK082925|Rbm8a|60365|RNA binding motif protein 8a	BC020086|Rbm8a|60365|RNA binding motif protein 8a	BC058376|Rbm8a|60365|RNA binding motif protein 8a
mm9_v1_chr4_-_144376485_144376485	0.0871396	FOXD3.p2	NM_001126316|Gm438|329993|predicted gene 438
mm9_v1_chr1_+_162125349_162125420	0.0860388	FOXD3.p2	AK007673|Mrps14|64659|mitochondrial ribosomal protein S14	AK010242|Mrps14|64659|mitochondrial ribosomal protein S14	AK144195|Mrps14|64659|mitochondrial ribosomal protein S14	AK083352|Mrps14|64659|mitochondrial ribosomal protein S14	NM_025474|Mrps14|64659|mitochondrial ribosomal protein S14	BC044057|Mrps14|64659|mitochondrial ribosomal protein S14
mm9_v1_chr13_-_40825789_40825811	0.0859784	FOXD3.p2	U17287|Tcfap2a|21418|transcription factor AP-2, alpha	AK053704|Tcfap2a|21418|transcription factor AP-2, alpha	NM_001122948|Tcfap2a|21418|transcription factor AP-2, alpha
mm9_v1_chr6_-_38249209_38249350	0.0859484	FOXD3.p2	AK084475|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK045287|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK051064|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	NM_172467|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138180|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138181|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chrX_+_108009728_108009803	0.0855371	FOXD3.p2	BC138657|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC145919|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC052012|Pou3f4|18994|POU domain, class 3, transcription factor 4	X66603|Pou3f4|18994|POU domain, class 3, transcription factor 4	AK158302|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC086670|Pou3f4|18994|POU domain, class 3, transcription factor 4	NM_008901|Pou3f4|18994|POU domain, class 3, transcription factor 4
mm9_v1_chr2_+_157193317_157193359	0.085449	FOXD3.p2	NM_026968|Manbal|69161|mannosidase, beta A, lysosomal-like	AK079707|Manbal|69161|mannosidase, beta A, lysosomal-like	AK169993|Manbal|69161|mannosidase, beta A, lysosomal-like	AK007599|Manbal|69161|mannosidase, beta A, lysosomal-like	BC013803|Manbal|69161|mannosidase, beta A, lysosomal-like	BC030375|Manbal|69161|mannosidase, beta A, lysosomal-like
mm9_v1_chr3_+_51299646_51299685	0.0854354	FOXD3.p2	
mm9_v1_chr5_-_149862867_149863025	0.0852909	FOXD3.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr5_-_123237776_123238028	0.0851782	FOXD3.p2	
mm9_v1_chr7_-_109166668_109166710	0.0851781	FOXD3.p2	AF122907|Il18bp|16068|interleukin 18 binding protein	NM_010531|Il18bp|16068|interleukin 18 binding protein	AK003370|Il18bp|16068|interleukin 18 binding protein
mm9_v1_chr1_+_58561979_58562000	0.0851244	FOXD3.p2	AK138448|Gm15834|100306960|predicted gene 15834	AK144771|Gm15834|100306960|predicted gene 15834	AK053027|Gm15834|100306960|predicted gene 15834
mm9_v1_chr19_-_55291933_55291946	0.0849605	FOXD3.p2	AK049940|Gucy2g|73707|guanylate cyclase 2g
mm9_v1_chr15_+_101904203_101904238	0.0847118	FOXD3.p2	NM_145625|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr16_-_55974662_55974675	0.084486	FOXD3.p2	BC017620|2310061J03Rik|66391|RIKEN cDNA 2310061J03 gene
mm9_v1_chr7_-_16973112_16973224	0.083991	FOXD3.p2	AK010313|Sae1|56459|SUMO1 activating enzyme subunit 1	AK090012|Sae1|56459|SUMO1 activating enzyme subunit 1	AK162789|Sae1|56459|SUMO1 activating enzyme subunit 1	AB024303|Sae1|56459|SUMO1 activating enzyme subunit 1	BC068164|Sae1|56459|SUMO1 activating enzyme subunit 1	NM_019748|Sae1|56459|SUMO1 activating enzyme subunit 1	AK087556|Sae1|56459|SUMO1 activating enzyme subunit 1	AK159672|Sae1|56459|SUMO1 activating enzyme subunit 1	AK011772|Sae1|56459|SUMO1 activating enzyme subunit 1	AK154139|Sae1|56459|SUMO1 activating enzyme subunit 1
mm9_v1_chr15_-_85408499_85408499	0.083916	FOXD3.p2	BC066003|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_001163634|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr13_+_97408920_97408964	0.0826798	FOXD3.p2	AK020301|Col4a3bp|68018|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm9_v1_chr2_-_103105045_103105100	0.0823655	FOXD3.p2	AK162509|Ehf|13661|ets homologous factor
mm9_v1_chr17_+_56724404_56724414	0.0817874	FOXD3.p2	NM_001163300|Safb|224903|scaffold attachment factor B
mm9_v1_chr6_-_124861656_124861722	0.0815161	FOXD3.p2	BC120591|Lag3|16768|lymphocyte-activation gene 3	NM_008479|Lag3|16768|lymphocyte-activation gene 3	X98113|Lag3|16768|lymphocyte-activation gene 3
mm9_v1_chr5_-_23349880_23349980	0.0814435	FOXD3.p2	AK008581|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)	AK003864|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)	BC055352|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)	NM_025394|Tomm7|66169|translocase of outer mitochondrial membrane 7 homolog (yeast)
mm9_v1_chr15_-_50721552_50721725	0.0811935	FOXD3.p2	BC099962|Trps1|83925|trichorhinophalangeal syndrome I (human)	AF346836|Trps1|83925|trichorhinophalangeal syndrome I (human)	NM_032000|Trps1|83925|trichorhinophalangeal syndrome I (human)
mm9_v1_chr7_-_20281956_20282388	0.0798771	FOXD3.p2	
mm9_v1_chr1_+_182834384_182834472	0.079415	FOXD3.p2	NM_133705|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK007535|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK165618|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	BC006882|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK167622|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK150756|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2	AK152302|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr7_+_31017092_31017092	0.0793509	FOXD3.p2	BC062812|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I	NM_027259|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I
mm9_v1_chr17_-_35018943_35019021	0.0792295	FOXD3.p2	M57891|C2|12263|complement component 2 (within H-2S)	BC011086|C2|12263|complement component 2 (within H-2S)
mm9_v1_chr12_-_85958287_85958415	0.0780185	FOXD3.p2	AJ001166|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	AK028420|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	BC050102|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	NM_008992|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4
mm9_v1_chr3_-_92392895_92392945	0.0771845	FOXD3.p2	BC061167|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	AK077172|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	BC055104|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	S49659|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	M29603|Smcp|17235|sperm mitochondria-associated cysteine-rich protein	NM_008574|Smcp|17235|sperm mitochondria-associated cysteine-rich protein
mm9_v1_chr10_+_67442317_67442462	0.0771356	FOXD3.p2	AK052662|Rtkn2|170799|rhotekin 2	NM_001081346|Rtkn2|170799|rhotekin 2	BC158093|Rtkn2|170799|rhotekin 2	BC116341|Rtkn2|170799|rhotekin 2	BC116342|Rtkn2|170799|rhotekin 2	AK045134|Rtkn2|170799|rhotekin 2	AK030986|Rtkn2|170799|rhotekin 2
mm9_v1_chr17_-_45570655_45570685	0.0768562	FOXD3.p2	BC031480|Cdc5l|71702|cell division cycle 5-like (S. pombe)	NM_152810|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK004547|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr4_+_143379236_143379267	0.0766974	FOXD3.p2	NM_001007077|Gm13023|194227|predicted gene 13023	AK135972|Gm13023|194227|predicted gene 13023	BC084594|Gm13023|194227|predicted gene 13023
mm9_v1_chr1_-_64663716_64663821	0.0765725	FOXD3.p2	AK033578|Fam119a|67099|family with sequence similarity 119, member A	NM_025964|Fam119a|67099|family with sequence similarity 119, member A	AK009673|Fam119a|67099|family with sequence similarity 119, member A	AK009675|Fam119a|67099|family with sequence similarity 119, member A	AK009678|Fam119a|67099|family with sequence similarity 119, member A	AK009679|Fam119a|67099|family with sequence similarity 119, member A	AK009680|Fam119a|67099|family with sequence similarity 119, member A	AK009682|Fam119a|67099|family with sequence similarity 119, member A	AK011433|Fam119a|67099|family with sequence similarity 119, member A
mm9_v1_chr2_+_69877182_69877182	0.0751204	FOXD3.p2	NM_177376|Myo3b|329421|myosin IIIB
mm9_v1_chr11_+_43247252_43247280	0.074179	FOXD3.p2	BC082780|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC025870|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK046262|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK029117|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK049178|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC060954|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr4_-_109125244_109125254	0.0736931	FOXD3.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr9_-_60497537_60497561	0.0734384	FOXD3.p2	AK082406|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr5_-_137041850_137041964	0.0725811	FOXD3.p2	BC079570|Cux1|13047|cut-like homeobox 1
mm9_v1_chrX_+_39421012_39421147	0.0722929	FOXD3.p2	NM_009688|Xiap|11798|X-linked inhibitor of apoptosis
mm9_v1_chr4_+_143947866_143947866	0.072049	FOXD3.p2	BC100406|Gm13119|433779|predicted gene 13119	NM_001034101|Gm13119|433779|predicted gene 13119
mm9_v1_chr1_+_97230610_97230736	0.0699523	FOXD3.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr3_+_87723411_87723427	0.0695933	FOXD3.p2	AK167623|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr9_+_44205157_44205205	0.068726	FOXD3.p2	AK040077|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK155339|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr4_-_148511650_148511708	0.0682712	FOXD3.p2	BC138926|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC138927|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK011725|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC048521|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK012995|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK013038|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	NM_027263|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1
mm9_v1_chr15_-_9070066_9070213	0.0679823	FOXD3.p2	AF083215|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK204645|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC003468|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC092236|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK167677|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK037002|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK044212|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK166034|Skp2|27401|S-phase kinase-associated protein 2 (p45)	AK032979|Skp2|27401|S-phase kinase-associated protein 2 (p45)	BC098371|Skp2|27401|S-phase kinase-associated protein 2 (p45)	NM_013787|Skp2|27401|S-phase kinase-associated protein 2 (p45)	NM_145468|Skp2|27401|S-phase kinase-associated protein 2 (p45)
mm9_v1_chr11_+_98543867_98543870	0.0679004	FOXD3.p2	BC003197|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	NM_009439|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr3_-_88100759_88100800	0.0676547	FOXD3.p2	AK006195|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene	NM_029801|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene	BC107298|1700021C14Rik|76927|RIKEN cDNA 1700021C14 gene
mm9_v1_chr2_+_30812810_30812845	0.0675736	FOXD3.p2	AK011416|Tor1b|30934|torsin family 1, member B
mm9_v1_chr8_-_59966523_59966681	0.0674555	FOXD3.p2	BC132081|Sap30|60406|sin3 associated polypeptide	BC132087|Sap30|60406|sin3 associated polypeptide	AK088745|Sap30|60406|sin3 associated polypeptide	BC037768|Sap30|60406|sin3 associated polypeptide	AF075136|Sap30|60406|sin3 associated polypeptide	AK010928|Sap30|60406|sin3 associated polypeptide	NM_021788|Sap30|60406|sin3 associated polypeptide
mm9_v1_chr15_+_27396405_27396728	0.0673678	FOXD3.p2	AK083135|Ank|11732|progressive ankylosis	DQ832285|Ank|11732|progressive ankylosis	NM_020332|Ank|11732|progressive ankylosis	BC042644|Ank|11732|progressive ankylosis	BC054379|Ank|11732|progressive ankylosis	AK148070|Ank|11732|progressive ankylosis	AF001532|Ank|11732|progressive ankylosis	AF274752|Ank|11732|progressive ankylosis
mm9_v1_chr5_-_122804200_122804240	0.0663941	FOXD3.p2	AY297460|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	BC021784|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	NM_144912|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK081488|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK157179|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK042331|Rad9b|231724|RAD9 homolog B (S. cerevisiae)	AK136504|Rad9b|231724|RAD9 homolog B (S. cerevisiae)
mm9_v1_chr18_-_81130721_81130824	0.0663702	FOXD3.p2	BC057000|Atp9b|50771|ATPase, class II, type 9B	BC079626|Atp9b|50771|ATPase, class II, type 9B	AK044331|Atp9b|50771|ATPase, class II, type 9B	AK166562|Atp9b|50771|ATPase, class II, type 9B	NM_015805|Atp9b|50771|ATPase, class II, type 9B
mm9_v1_chr15_+_54242324_54242328	0.0663511	FOXD3.p2	AB016429|Colec10|239447|collectin sub-family member 10	AK028423|Colec10|239447|collectin sub-family member 10	BC106836|Colec10|239447|collectin sub-family member 10	BC106837|Colec10|239447|collectin sub-family member 10	BC108945|Colec10|239447|collectin sub-family member 10	NM_173422|Colec10|239447|collectin sub-family member 10
mm9_v1_chr2_+_154839149_154839305	0.0663449	FOXD3.p2	S70326|a|50518|nonagouti	L06451|a|50518|nonagouti	S70394|a|50518|nonagouti	L06941|a|50518|nonagouti	NM_015770|a|50518|nonagouti
mm9_v1_chr6_-_49214015_49214054	0.0658352	FOXD3.p2	AK170599|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076230|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK089980|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK171708|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK005187|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	NM_198102|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK148552|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr8_+_73197262_73197338	0.0655483	FOXD3.p2	AK167784|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK089028|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ249439|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK010910|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK003847|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AK143470|Lsm4|50783|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm9_v1_chr13_+_21454688_21454753	0.0653486	FOXD3.p2	AK129138|Zscan12|22758|zinc finger and SCAN domain containing 12	NM_016684|Zscan12|22758|zinc finger and SCAN domain containing 12	AK075886|Zscan12|22758|zinc finger and SCAN domain containing 12	AK139837|Zscan12|22758|zinc finger and SCAN domain containing 12	AK142005|Zscan12|22758|zinc finger and SCAN domain containing 12	BC027041|Zscan12|22758|zinc finger and SCAN domain containing 12
mm9_v1_chr2_-_164568585_164568766	0.0648848	FOXD3.p2	BC116847|Wfdc3|71856|WAP four-disulfide core domain 3	BC116875|Wfdc3|71856|WAP four-disulfide core domain 3	NM_027961|Wfdc3|71856|WAP four-disulfide core domain 3
mm9_v1_chr6_-_100621086_100621167	0.0635502	FOXD3.p2	BC052657|Shq1|72171|SHQ1 homolog (S. cerevisiae)	AK012978|Shq1|72171|SHQ1 homolog (S. cerevisiae)	NM_181590|Shq1|72171|SHQ1 homolog (S. cerevisiae)
mm9_v1_chr4_+_147932566_147932571	0.0611979	FOXD3.p2	AF091392|Exosc10|50912|exosome component 10	AK162887|Exosc10|50912|exosome component 10	AK017621|Exosc10|50912|exosome component 10	BC027840|Exosc10|50912|exosome component 10
mm9_v1_chr8_-_22814073_22814118	0.0608495	FOXD3.p2	AY761184|AY761184|382000|cDNA sequence AY761184	AK008498|AY761184|382000|cDNA sequence AY761184	NM_001007582|AY761184|382000|cDNA sequence AY761184
mm9_v1_chrX_-_105011493_105011672	0.060693	FOXD3.p2	AK019383|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	BC016070|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	AK011297|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene	NM_025921|2610002M06Rik|67028|RIKEN cDNA 2610002M06 gene
mm9_v1_chr3_+_92796138_92796147	0.060268	FOXD3.p2	BC060281|Lce3f|69520|late cornified envelope 3F	NM_001018079|Lce3f|69520|late cornified envelope 3F
mm9_v1_chr17_+_73186929_73186985	0.0601635	FOXD3.p2	BC085109|Ypel5|383295|yippee-like 5 (Drosophila)
mm9_v1_chr9_-_20297116_20297218	0.0596298	FOXD3.p2	AK036912|Zfp426|235028|zinc finger protein 426	AK048284|Zfp426|235028|zinc finger protein 426	BC023931|Zfp426|235028|zinc finger protein 426	BC024805|Zfp426|235028|zinc finger protein 426	AK220563|Zfp426|235028|zinc finger protein 426	AK085144|Zfp426|235028|zinc finger protein 426	NM_001110309|Zfp426|235028|zinc finger protein 426	NM_146221|Zfp426|235028|zinc finger protein 426
mm9_v1_chr2_-_63022140_63022343	0.0595402	FOXD3.p2	AJ291608|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK052366|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK043768|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK034003|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_133207|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm9_v1_chr16_+_94592373_94592458	0.058487	FOXD3.p2	AK165850|Ttc3|22129|tetratricopeptide repeat domain 3	AK166120|Ttc3|22129|tetratricopeptide repeat domain 3	BC019173|Ttc3|22129|tetratricopeptide repeat domain 3	BC057207|Ttc3|22129|tetratricopeptide repeat domain 3	AK084201|Ttc3|22129|tetratricopeptide repeat domain 3	AK166164|Ttc3|22129|tetratricopeptide repeat domain 3	AK166298|Ttc3|22129|tetratricopeptide repeat domain 3	AK089974|Ttc3|22129|tetratricopeptide repeat domain 3	BC037654|Ttc3|22129|tetratricopeptide repeat domain 3	AK220495|Ttc3|22129|tetratricopeptide repeat domain 3
mm9_v1_chr2_-_147871630_147871640	0.0581332	FOXD3.p2	AB231453|Foxa2|15376|forkhead box A2	L10409|Foxa2|15376|forkhead box A2
mm9_v1_chr6_+_51473868_51474033	0.0574375	FOXD3.p2	AK150704|Snx10|71982|sorting nexin 10	AK150999|Snx10|71982|sorting nexin 10	AK151320|Snx10|71982|sorting nexin 10	AK151520|Snx10|71982|sorting nexin 10	AK153127|Snx10|71982|sorting nexin 10	NM_001127349|Snx10|71982|sorting nexin 10	AK152949|Snx10|71982|sorting nexin 10	AK152825|Snx10|71982|sorting nexin 10	AK153356|Snx10|71982|sorting nexin 10	AK010399|Snx10|71982|sorting nexin 10	AK169110|Snx10|71982|sorting nexin 10	BC010334|Snx10|71982|sorting nexin 10	AK042505|Snx10|71982|sorting nexin 10	AK150878|Snx10|71982|sorting nexin 10
mm9_v1_chrX_+_53708015_53708070	0.056313	FOXD3.p2	NM_172779|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK031945|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	BC051161|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK083942|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B	AK160627|Ddx26b|236790|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm9_v1_chr1_-_9934196_9934205	0.0557802	FOXD3.p2	AK003573|Snhg6|73824|small nucleolar RNA host gene (non-protein coding) 6
mm9_v1_chr11_-_96902657_96902728	0.0556099	FOXD3.p2	AK005668|Lrrc46|69297|leucine rich repeat containing 46	BC022723|Lrrc46|69297|leucine rich repeat containing 46	NM_027026|Lrrc46|69297|leucine rich repeat containing 46	AK158517|Lrrc46|69297|leucine rich repeat containing 46
mm9_v1_chr3_+_103718042_103718073	0.0553515	FOXD3.p2	AB101658|Rsbn1|229675|rosbin, round spermatid basic protein 1	NM_172684|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139213|Rsbn1|229675|rosbin, round spermatid basic protein 1	BC139215|Rsbn1|229675|rosbin, round spermatid basic protein 1
mm9_v1_chr7_+_147129687_147129754	0.0552791	FOXD3.p2	AK131968|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AK010589|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AY606111|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AK010280|Utf1|22286|undifferentiated embryonic cell transcription factor 1	BC138841|Utf1|22286|undifferentiated embryonic cell transcription factor 1	BC138842|Utf1|22286|undifferentiated embryonic cell transcription factor 1	D31647|Utf1|22286|undifferentiated embryonic cell transcription factor 1	NM_009482|Utf1|22286|undifferentiated embryonic cell transcription factor 1
mm9_v1_chr8_-_3467624_3467679	0.0552604	FOXD3.p2	BC062135|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK007848|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK007582|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	NM_026951|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK165461|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	BC024096|Pex11c|69129|peroxisomal biogenesis factor 11 gamma
mm9_v1_chr14_+_105657889_105657939	0.0549773	FOXD3.p2	NM_001190989|Ndfip2|76273|Nedd4 family interacting protein 2	NM_029561|Ndfip2|76273|Nedd4 family interacting protein 2
mm9_v1_chr3_+_93246251_93246251	0.0547395	FOXD3.p2	NM_001163098|Tchh|99681|trichohyalin
mm9_v1_chr1_+_182837982_182838044	0.0543758	FOXD3.p2	AK187139|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr7_-_53965879_53966065	0.0539246	FOXD3.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr8_+_69384110_69384214	0.053131	FOXD3.p2	NM_001163564|Naf1|234344|nuclear assembly factor 1 homolog (S. cerevisiae)
mm9_v1_chr16_-_89404012_89404112	0.0525345	FOXD3.p2	AF345297|Krtap16-7|170656|keratin associated protein 16-7	BC145974|Krtap16-7|170656|keratin associated protein 16-7	BC145976|Krtap16-7|170656|keratin associated protein 16-7	NM_028621|Krtap16-7|170656|keratin associated protein 16-7	AK003736|Krtap16-7|170656|keratin associated protein 16-7	BC147776|Krtap16-7|170656|keratin associated protein 16-7	BC147786|Krtap16-7|170656|keratin associated protein 16-7
mm9_v1_chr12_+_56404242_56404258	0.0520285	FOXD3.p2	AK031144|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene	AK045434|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr1_+_59538966_59539075	0.0520049	FOXD3.p2	NM_008057|Fzd7|14369|frizzled homolog 7 (Drosophila)	BC063077|Fzd7|14369|frizzled homolog 7 (Drosophila)
mm9_v1_chr10_-_93498449_93498481	0.0518662	FOXD3.p2	AY753561|Vezt|215008|vezatin, adherens junctions transmembrane protein	AY753562|Vezt|215008|vezatin, adherens junctions transmembrane protein	DQ025533|Vezt|215008|vezatin, adherens junctions transmembrane protein	BC056428|Vezt|215008|vezatin, adherens junctions transmembrane protein
mm9_v1_chr17_+_26389892_26389910	0.0517141	FOXD3.p2	AK017655|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK007781|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK010539|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr3_+_82830071_82830096	0.0515667	FOXD3.p2	NM_001111048|Fga|14161|fibrinogen alpha chain	NM_010196|Fga|14161|fibrinogen alpha chain	AK146828|Fga|14161|fibrinogen alpha chain	BC005467|Fga|14161|fibrinogen alpha chain	BC024778|Fga|14161|fibrinogen alpha chain
mm9_v1_chr13_-_41923709_41923740	0.0514455	FOXD3.p2	BC027755|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene
mm9_v1_chr2_+_74543545_74543545	0.0511339	FOXD3.p2	NM_008276|Hoxd8|15437|homeobox D8
mm9_v1_chr17_-_22498323_22498380	0.0507804	FOXD3.p2	BC090966|Zfp944|319615|zinc finger protein 944	AK033651|Zfp944|319615|zinc finger protein 944	AK031839|Zfp944|319615|zinc finger protein 944	AK167780|Zfp944|319615|zinc finger protein 944	NM_176962|Zfp944|319615|zinc finger protein 944	AK048043|Zfp944|319615|zinc finger protein 944
mm9_v1_chr2_+_109857966_109858261	0.0505269	FOXD3.p2	AK147056|Ccdc34|68201|coiled-coil domain containing 34	NM_026613|Ccdc34|68201|coiled-coil domain containing 34	BC108339|Ccdc34|68201|coiled-coil domain containing 34	AK019172|Ccdc34|68201|coiled-coil domain containing 34	AK033555|Ccdc34|68201|coiled-coil domain containing 34	AK019247|Ccdc34|68201|coiled-coil domain containing 34	AK012383|Ccdc34|68201|coiled-coil domain containing 34	BC062248|Ccdc34|68201|coiled-coil domain containing 34	AK014021|Ccdc34|68201|coiled-coil domain containing 34	BC089458|Ccdc34|68201|coiled-coil domain containing 34	BC049229|Ccdc34|68201|coiled-coil domain containing 34
mm9_v1_chr1_+_174886898_174886898	0.0499476	FOXD3.p2	BC119298|Olfr16|18313|olfactory receptor 16	BC119300|Olfr16|18313|olfactory receptor 16	NM_008763|Olfr16|18313|olfactory receptor 16
mm9_v1_chr16_-_55974685_55974705	0.0493997	FOXD3.p2	AK010004|2310061J03Rik|66391|RIKEN cDNA 2310061J03 gene
mm9_v1_chr11_-_106649811_106649871	0.0490269	FOXD3.p2	AK132779|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr18_+_67801208_67801282	0.0482552	FOXD3.p2	AB031387|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK006069|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	NM_134138|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK167840|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK135578|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK077569|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	BC016606|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2
mm9_v1_chr11_+_68781623_68781690	0.0476797	FOXD3.p2	AK171131|Slc25a35|71998|solute carrier family 25, member 35	AK007453|Slc25a35|71998|solute carrier family 25, member 35	NM_028048|Slc25a35|71998|solute carrier family 25, member 35	AK157873|Slc25a35|71998|solute carrier family 25, member 35	AK035739|Slc25a35|71998|solute carrier family 25, member 35	BC019996|Slc25a35|71998|solute carrier family 25, member 35
mm9_v1_chr5_+_88431549_88431605	0.0474524	FOXD3.p2	NM_011422|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71629|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71631|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC035428|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC034553|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC055857|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031806|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC141243|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC145569|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031921|Smr3a|20599|submaxillary gland androgen regulated protein 3A
mm9_v1_chr6_+_40578829_40578829	0.047391	FOXD3.p2	AY229885|Mgam|232714|maltase-glucoamylase	AY229886|Mgam|232714|maltase-glucoamylase	EU937529|Mgam|232714|maltase-glucoamylase	NM_001171003|Mgam|232714|maltase-glucoamylase
mm9_v1_chr5_-_4104696_4104696	0.0470764	FOXD3.p2	NM_020010|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr2_+_128955435_128955560	0.0466705	FOXD3.p2	NM_025395|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	AK003341|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	BC096668|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	AK003936|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	BC094414|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5	AK013018|Chchd5|66170|coiled-coil-helix-coiled-coil-helix domain containing 5
mm9_v1_chr9_-_65756482_65756602	0.0456609	FOXD3.p2	AF539614|Trip4|56404|thyroid hormone receptor interactor 4	AK016170|Trip4|56404|thyroid hormone receptor interactor 4	AK139423|Trip4|56404|thyroid hormone receptor interactor 4	AK166192|Trip4|56404|thyroid hormone receptor interactor 4	NM_019797|Trip4|56404|thyroid hormone receptor interactor 4
mm9_v1_chrX_+_71518323_71518327	0.0456374	FOXD3.p2	
mm9_v1_chr3_-_8923789_8923856	0.0452737	FOXD3.p2	AK088314|Mrps28|66230|mitochondrial ribosomal protein S28	AK011036|Mrps28|66230|mitochondrial ribosomal protein S28	BC028530|Mrps28|66230|mitochondrial ribosomal protein S28	AK005229|Mrps28|66230|mitochondrial ribosomal protein S28	NM_025434|Mrps28|66230|mitochondrial ribosomal protein S28
mm9_v1_chr1_-_157589156_157589156	0.0449869	FOXD3.p2	BC049834|Lhx4|16872|LIM homeobox protein 4	NM_010712|Lhx4|16872|LIM homeobox protein 4
mm9_v1_chr5_-_104058250_104058421	0.0446218	FOXD3.p2	AJ583504|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC139343|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC139346|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	BC127608|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	AK018423|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6	NM_029415|Slc10a6|75750|solute carrier family 10 (sodium/bile acid cotransporter family), member 6
mm9_v1_chr4_+_132091462_132091502	0.0445104	FOXD3.p2	AK088325|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	NM_172400|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC137735|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC145655|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK049526|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK150933|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK003892|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	AK168645|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC064732|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC066222|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC080760|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8	BC057191|Dnajc8|68598|DnaJ (Hsp40) homolog, subfamily C, member 8
mm9_v1_chr12_-_88541249_88541271	0.0443822	FOXD3.p2	BC150860|Tmed8|382620|transmembrane emp24 domain containing 8
mm9_v1_chr7_-_133646767_133646989	0.0439533	FOXD3.p2	BC054483|Atxn2l|233871|ataxin 2-like	NM_183020|Atxn2l|233871|ataxin 2-like	AK155062|Atxn2l|233871|ataxin 2-like	AK084800|Atxn2l|233871|ataxin 2-like
mm9_v1_chr3_-_127483385_127483450	0.0434103	FOXD3.p2	AK018401|Alpk1|71481|alpha-kinase 1	AK041315|Alpk1|71481|alpha-kinase 1	AK173191|Alpk1|71481|alpha-kinase 1	NM_027808|Alpk1|71481|alpha-kinase 1
mm9_v1_chr6_-_25639835_25639849	0.0432843	FOXD3.p2	BC031918|Gpr37|14763|G protein-coupled receptor 37
mm9_v1_chr7_-_91763744_91763768	0.0428992	FOXD3.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr14_+_25309895_25309936	0.0427626	FOXD3.p2	NM_011297|Rps24|20088|ribosomal protein S24	NM_207634|Rps24|20088|ribosomal protein S24	NM_207635|Rps24|20088|ribosomal protein S24
mm9_v1_chr19_-_44629894_44629934	0.0423787	FOXD3.p2	AK010177|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	AK013516|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	BC043019|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	NM_026061|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8	AK028070|Ndufb8|67264|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8
mm9_v1_chr16_+_65815758_65815952	0.0419184	FOXD3.p2	NM_028572|Vgll3|73569|vestigial like 3 (Drosophila)	BC042696|Vgll3|73569|vestigial like 3 (Drosophila)
mm9_v1_chr7_+_130114059_130114440	0.0417683	FOXD3.p2	NM_011247|Rbbp6|19647|retinoblastoma binding protein 6	NM_175023|Rbbp6|19647|retinoblastoma binding protein 6	AK081261|Rbbp6|19647|retinoblastoma binding protein 6	AK045635|Rbbp6|19647|retinoblastoma binding protein 6	BC025874|Rbbp6|19647|retinoblastoma binding protein 6
mm9_v1_chr7_-_108437135_108437187	0.0412206	FOXD3.p2	
mm9_v1_chr3_+_157204031_157204041	0.040452	FOXD3.p2	BC051187|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr5_-_123979739_123979846	0.0403415	FOXD3.p2	AK080345|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr17_-_24210402_24210430	0.0403222	FOXD3.p2	BC021777|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK129077|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK143644|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chr2_-_164104007_164104044	0.0402049	FOXD3.p2	M35732|Svs4|20941|seminal vesicle secretory protein 4	AK020349|Svs4|20941|seminal vesicle secretory protein 4	BC115604|Svs4|20941|seminal vesicle secretory protein 4	BC115605|Svs4|20941|seminal vesicle secretory protein 4	NM_009300|Svs4|20941|seminal vesicle secretory protein 4
mm9_v1_chr14_+_25309955_25309963	0.0393505	FOXD3.p2	BC081457|Rps24|20088|ribosomal protein S24	BC091748|Rps24|20088|ribosomal protein S24	X60289|Rps24|20088|ribosomal protein S24
mm9_v1_chr18_+_35750071_35750097	0.039309	FOXD3.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr17_-_35164860_35164960	0.0392968	FOXD3.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr3_+_138190223_138190257	0.0390575	FOXD3.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr1_-_95698320_95698458	0.0383681	FOXD3.p2	AK210481|Dtymk|21915|deoxythymidylate kinase	AK019284|Dtymk|21915|deoxythymidylate kinase	BC030178|Dtymk|21915|deoxythymidylate kinase	S82852|Dtymk|21915|deoxythymidylate kinase	S82853|Dtymk|21915|deoxythymidylate kinase	AK011955|Dtymk|21915|deoxythymidylate kinase
mm9_v1_chr6_+_83692983_83693062	0.0378967	FOXD3.p2	AK078810|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK168980|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AF435091|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085549|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	NM_134157|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC017127|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC080796|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052604|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC062202|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052707|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085469|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC058584|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC013168|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1
mm9_v1_chr16_-_8425201_8425228	0.0377683	FOXD3.p2	BC027071|Tmem114|74720|transmembrane protein 114	AK015757|Tmem114|74720|transmembrane protein 114	NM_029070|Tmem114|74720|transmembrane protein 114
mm9_v1_chr18_-_50728323_50728377	0.0376464	FOXD3.p2	AK014922|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	BC048447|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	NM_026108|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A	AK007231|Hdhd1a|67365|haloacid dehalogenase-like hydrolase domain containing 1A
mm9_v1_chr15_-_102501463_102501513	0.0374267	FOXD3.p2	BC081437|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK002311|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK012279|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK007747|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	AK075793|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)	NM_026468|Atp5g2|67942|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
mm9_v1_chr18_+_36942877_36943029	0.0368376	FOXD3.p2	AK088789|Hars2|70791|histidyl-tRNA synthetase 2, mitochondrial (putative)	AK014515|Hars2|70791|histidyl-tRNA synthetase 2, mitochondrial (putative)	AK145003|Hars2|70791|histidyl-tRNA synthetase 2, mitochondrial (putative)	AK077621|Hars2|70791|histidyl-tRNA synthetase 2, mitochondrial (putative)	BC004596|Hars2|70791|histidyl-tRNA synthetase 2, mitochondrial (putative)	NM_080636|Hars2|70791|histidyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr1_+_87942437_87942543	0.0361501	FOXD3.p2	BC137675|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	BC144821|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144992|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144993|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene
mm9_v1_chr8_-_73421336_73421350	0.0355318	FOXD3.p2	NM_029751|Rpl18a|76808|ribosomal protein L18A
mm9_v1_chr1_-_89905074_89905142	0.0353259	FOXD3.p2	BC030843|Usp40|227334|ubiquitin specific peptidase 40	AK166303|Usp40|227334|ubiquitin specific peptidase 40	BC117957|Usp40|227334|ubiquitin specific peptidase 40	BC117958|Usp40|227334|ubiquitin specific peptidase 40	AK050239|Usp40|227334|ubiquitin specific peptidase 40	AK045613|Usp40|227334|ubiquitin specific peptidase 40	AK132295|Usp40|227334|ubiquitin specific peptidase 40	NM_001033291|Usp40|227334|ubiquitin specific peptidase 40	NM_001198573|Usp40|227334|ubiquitin specific peptidase 40
mm9_v1_chr13_+_56804370_56804503	0.0352278	FOXD3.p2	NM_008541|Smad5|17129|MAD homolog 5 (Drosophila)	AK018077|Smad5|17129|MAD homolog 5 (Drosophila)	AF063006|Smad5|17129|MAD homolog 5 (Drosophila)	NM_001164041|Smad5|17129|MAD homolog 5 (Drosophila)	U58993|Smad5|17129|MAD homolog 5 (Drosophila)	AK139765|Smad5|17129|MAD homolog 5 (Drosophila)	BC048233|Smad5|17129|MAD homolog 5 (Drosophila)	BC050001|Smad5|17129|MAD homolog 5 (Drosophila)
mm9_v1_chr9_-_50363242_50363242	0.0347424	FOXD3.p2	NM_133217|Bco2|170752|beta-carotene oxygenase 2
mm9_v1_chr16_+_3908975_3909105	0.0342385	FOXD3.p2	BC024910|Cluap1|76779|clusterin associated protein 1	NM_029738|Cluap1|76779|clusterin associated protein 1	AK009540|Cluap1|76779|clusterin associated protein 1	AK134648|Cluap1|76779|clusterin associated protein 1	AK166050|Cluap1|76779|clusterin associated protein 1	AK011846|Cluap1|76779|clusterin associated protein 1
mm9_v1_chrX_+_149993135_149993155	0.0338363	FOXD3.p2	AK005674|Cypt3|69361|cysteine-rich perinuclear theca 3	BC048527|Cypt3|69361|cysteine-rich perinuclear theca 3	NM_173367|Cypt3|69361|cysteine-rich perinuclear theca 3	AM040452|Cypt3|69361|cysteine-rich perinuclear theca 3	AF463500|Cypt3|69361|cysteine-rich perinuclear theca 3
mm9_v1_chr13_+_41096549_41096687	0.0337055	FOXD3.p2	AY030406|Pak1ip1|68083|PAK1 interacting protein 1	AK002852|Pak1ip1|68083|PAK1 interacting protein 1	BC024629|Pak1ip1|68083|PAK1 interacting protein 1	AK150747|Pak1ip1|68083|PAK1 interacting protein 1	AK150919|Pak1ip1|68083|PAK1 interacting protein 1	AK077941|Pak1ip1|68083|PAK1 interacting protein 1	AK135946|Pak1ip1|68083|PAK1 interacting protein 1	BC060371|Pak1ip1|68083|PAK1 interacting protein 1	BC018522|Pak1ip1|68083|PAK1 interacting protein 1	BC116729|Pak1ip1|68083|PAK1 interacting protein 1	BC116731|Pak1ip1|68083|PAK1 interacting protein 1
mm9_v1_chr7_-_5364746_5364746	0.0329375	FOXD3.p2	AF324869|Vmn1r58|81014|vomeronasal 1 receptor 58	NM_030739|Vmn1r58|81014|vomeronasal 1 receptor 58
mm9_v1_chr3_+_138078450_138078473	0.0321917	FOXD3.p2	AK132994|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_011996|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	AJ245750|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100729|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100736|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100730|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide
mm9_v1_chr1_+_20720985_20720998	0.0317932	FOXD3.p2	AK040420|Il17a|16171|interleukin 17A	BC119303|Il17a|16171|interleukin 17A	BC119309|Il17a|16171|interleukin 17A	NM_010552|Il17a|16171|interleukin 17A	U43088|Il17a|16171|interleukin 17A
mm9_v1_chr7_-_134339388_134339535	0.0317879	FOXD3.p2	AK167249|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK030393|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	BC079575|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK154346|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK010582|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	BC006920|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK031694|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	AK034689|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2	NM_027353|Cd2bp2|70233|CD2 antigen (cytoplasmic tail) binding protein 2
mm9_v1_chr18_+_37170365_37170627	0.0315911	FOXD3.p2	AK141960|Pcdha11|12942|protocadherin alpha 11	AK139436|Pcdha11|12942|protocadherin alpha 11	AK043705|Pcdha11|12942|protocadherin alpha 11	BC141349|Pcdha11|12942|protocadherin alpha 11	AY013758|Pcdha11|12942|protocadherin alpha 11	NM_009960|Pcdha11|12942|protocadherin alpha 11	AB008182|Pcdha11|12942|protocadherin alpha 11
mm9_v1_chr2_-_129627180_129627194	0.0312566	FOXD3.p2	AB041802|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene	AK016906|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene	AK030036|4932416H05Rik|654409|RIKEN cDNA 4932416H05 gene
mm9_v1_chr11_+_31770920_31770944	0.0307352	FOXD3.p2	AK173229|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4
mm9_v1_chr13_-_21622917_21622982	0.0303564	FOXD3.p2	BC050152|Zfp192|93681|zinc finger protein 192	AK032718|Zfp192|93681|zinc finger protein 192	AK134299|Zfp192|93681|zinc finger protein 192	NM_139141|Zfp192|93681|zinc finger protein 192
mm9_v1_chr15_+_73582208_73582380	0.0292554	FOXD3.p2	BC027445|Ptp4a3|19245|protein tyrosine phosphatase 4a3	CT010215|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK003954|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr6_+_65621583_65621630	0.0285671	FOXD3.p2	AK049802|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	AK029210|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	NM_172399|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene	BC047154|A930038C07Rik|68169|RIKEN cDNA A930038C07 gene
mm9_v1_chr15_+_76173936_76173991	0.0285501	FOXD3.p2	AK011288|Cyc1|66445|cytochrome c-1	NM_025567|Cyc1|66445|cytochrome c-1	AK151299|Cyc1|66445|cytochrome c-1	AK170272|Cyc1|66445|cytochrome c-1	BC005620|Cyc1|66445|cytochrome c-1	AK002815|Cyc1|66445|cytochrome c-1	BC082790|Cyc1|66445|cytochrome c-1
mm9_v1_chr8_+_58773380_58773394	0.0282696	FOXD3.p2	AK002472|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	AK146038|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	BC021157|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	U44389|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)
mm9_v1_chr6_-_30908981_30908989	0.0278615	FOXD3.p2	DQ534758|Klf14|619665|Kruppel-like factor 14	AK030435|Klf14|619665|Kruppel-like factor 14	NM_001135093|Klf14|619665|Kruppel-like factor 14
mm9_v1_chr3_-_58689068_58689133	0.0275125	FOXD3.p2	AK041623|Clrn1|229320|clarin 1	AK042523|Clrn1|229320|clarin 1	BC132254|Clrn1|229320|clarin 1	BC132256|Clrn1|229320|clarin 1	BC145202|Clrn1|229320|clarin 1	AF495718|Clrn1|229320|clarin 1	AF495719|Clrn1|229320|clarin 1	AF495720|Clrn1|229320|clarin 1	NM_153384|Clrn1|229320|clarin 1	NM_153385|Clrn1|229320|clarin 1	NM_153386|Clrn1|229320|clarin 1
mm9_v1_chr5_-_134790544_134790615	0.0273957	FOXD3.p2	AF017085|Gtf2i|14886|general transcription factor II I	AY030290|Gtf2i|14886|general transcription factor II I	AY030291|Gtf2i|14886|general transcription factor II I	AY030292|Gtf2i|14886|general transcription factor II I	AY030293|Gtf2i|14886|general transcription factor II I	AK147201|Gtf2i|14886|general transcription factor II I	BC053044|Gtf2i|14886|general transcription factor II I	NM_001080746|Gtf2i|14886|general transcription factor II I	NM_001080747|Gtf2i|14886|general transcription factor II I	NM_001080748|Gtf2i|14886|general transcription factor II I	NM_001080749|Gtf2i|14886|general transcription factor II I	NM_010365|Gtf2i|14886|general transcription factor II I
mm9_v1_chr5_+_4192366_4192433	0.0271018	FOXD3.p2	AK016498|Gm9897|208595|predicted gene 9897	NM_001042670|Gm9897|208595|predicted gene 9897	BC094442|Mterf|545725|mitochondrial transcription termination factor	BC082778|Mterf|545725|mitochondrial transcription termination factor	BC028525|Gm9897|208595|predicted gene 9897	BC141337|Gm9897|208595|predicted gene 9897	AK020320|Gm9897|208595|predicted gene 9897	AY262005|Mterf|545725|mitochondrial transcription termination factor
mm9_v1_chr9_-_42752453_42752579	0.0262729	FOXD3.p2	AK032029|Grik4|110637|glutamate receptor, ionotropic, kainate 4	NM_175481|Grik4|110637|glutamate receptor, ionotropic, kainate 4	AK080582|Grik4|110637|glutamate receptor, ionotropic, kainate 4
mm9_v1_chr14_-_55224744_55224800	0.0262068	FOXD3.p2	BC029624|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	BC034212|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	NM_028890|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene	AK163117|4931414P19Rik|74359|RIKEN cDNA 4931414P19 gene
mm9_v1_chr8_-_9976197_9976322	0.0260697	FOXD3.p2	AK083353|Lig4|319583|ligase IV, DNA, ATP-dependent	AK148081|Lig4|319583|ligase IV, DNA, ATP-dependent	NM_176953|Lig4|319583|ligase IV, DNA, ATP-dependent
mm9_v1_chrX_-_99352341_99352429	0.0258673	FOXD3.p2	AK045113|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK029015|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	BC037660|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK084617|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AK084618|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	AY172688|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like	NM_146235|Ercc6l|236930|excision repair cross-complementing rodent repair deficiency complementation group 6 - like
mm9_v1_chr19_+_22767090_22767108	0.0258594	FOXD3.p2	AK086143|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AK085182|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035244|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035245|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035246|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr13_+_31650033_31650038	0.0244123	FOXD3.p2	AK147202|Foxq1|15220|forkhead box Q1	NM_008239|Foxq1|15220|forkhead box Q1
mm9_v1_chr5_-_147396814_147396814	0.024106	FOXD3.p2	AK140298|Gpr12|14738|G-protein coupled receptor 12	NM_001010941|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chr9_+_56786000_56786014	0.0232495	FOXD3.p2	AK209259|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr12_-_106103214_106103237	0.0231652	FOXD3.p2	BC141280|Clmn|94040|calmin
mm9_v1_chr14_+_70132638_70132665	0.022486	FOXD3.p2	AK015602|4930480K23Rik|75016|RIKEN cDNA 4930480K23 gene
mm9_v1_chr6_+_5340417_5340708	0.0217381	FOXD3.p2	AK132068|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK018373|Asb4|65255|ankyrin repeat and SOCS box-containing 4	BC054745|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK076004|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AF155355|Asb4|65255|ankyrin repeat and SOCS box-containing 4	AK133894|Asb4|65255|ankyrin repeat and SOCS box-containing 4
mm9_v1_chr15_+_99239082_99239188	0.0212626	FOXD3.p2	AK039762|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK003483|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr7_+_51502089_51502113	0.0211238	FOXD3.p2	AK169789|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	NM_025880|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene	AK036099|2410002F23Rik|668661|RIKEN cDNA 2410002F23 gene
mm9_v1_chr3_+_152377070_152377075	0.0204594	FOXD3.p2	AK082806|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr12_+_56404272_56404278	0.0203836	FOXD3.p2	AK172942|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr16_-_91647216_91647232	0.0203493	FOXD3.p2	NM_010256|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr4_+_122960059_122960153	0.0199687	FOXD3.p2	BC058263|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	BC056432|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	NM_130881|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4
mm9_v1_chr3_-_30546739_30546790	0.0198913	FOXD3.p2	BC100519|Lrrc34|71827|leucine rich repeat containing 34	NM_027941|Lrrc34|71827|leucine rich repeat containing 34	AK005720|Lrrc34|71827|leucine rich repeat containing 34
mm9_v1_chr17_-_24664759_24664833	0.0198021	FOXD3.p2	BC008598|Traf7|224619|TNF receptor-associated factor 7	AK088431|Traf7|224619|TNF receptor-associated factor 7	AK131617|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr10_-_19627418_19627496	0.0193853	FOXD3.p2	AK160195|Pex7|18634|peroxisomal biogenesis factor 7	BC132213|Pex7|18634|peroxisomal biogenesis factor 7	BC132503|Pex7|18634|peroxisomal biogenesis factor 7	BC145300|Pex7|18634|peroxisomal biogenesis factor 7	U69171|Pex7|18634|peroxisomal biogenesis factor 7	AK053868|Pex7|18634|peroxisomal biogenesis factor 7	AK004687|Pex7|18634|peroxisomal biogenesis factor 7	NM_001161825|Pex7|18634|peroxisomal biogenesis factor 7	NM_008822|Pex7|18634|peroxisomal biogenesis factor 7
mm9_v1_chr4_-_61748264_61748345	0.0184732	FOXD3.p2	EU882235|Mup3|17842|major urinary protein 3	M27608|Mup3|17842|major urinary protein 3	X03525|Mup3|17842|major urinary protein 3	BC019965|Mup3|17842|major urinary protein 3	BC106100|Mup3|17842|major urinary protein 3	BC059102|Mup3|17842|major urinary protein 3	NM_001039544|Mup3|17842|major urinary protein 3
mm9_v1_chr12_-_85183292_85183292	0.0180507	FOXD3.p2	AF169191|Numb|18222|numb gene homolog (Drosophila)	AF169192|Numb|18222|numb gene homolog (Drosophila)	AF170709|Numb|18222|numb gene homolog (Drosophila)	NM_001136075|Numb|18222|numb gene homolog (Drosophila)	NM_010949|Numb|18222|numb gene homolog (Drosophila)
mm9_v1_chr8_-_23916037_23916141	0.0178592	FOXD3.p2	BC030484|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	BC027301|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK017991|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK134634|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK082988|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK080668|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK081220|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AY039763|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	AK077365|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_001122820|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit	NM_029505|Ap3m2|64933|adaptor-related protein complex 3, mu 2 subunit
mm9_v1_chr3_+_152377069_152377069	0.0175103	FOXD3.p2	AK013853|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K	AK160801|Pigk|329777|phosphatidylinositol glycan anchor biosynthesis, class K
mm9_v1_chr2_+_133378934_133378934	0.0173382	FOXD3.p2	BC100344|Bmp2|12156|bone morphogenetic protein 2	NM_007553|Bmp2|12156|bone morphogenetic protein 2
mm9_v1_chr7_-_48648629_48648748	0.0170862	FOXD3.p2	BC052842|AI987944|233168|expressed sequence AI987944	BC138015|AI987944|233168|expressed sequence AI987944	NM_183167|AI987944|233168|expressed sequence AI987944	BC036560|AI987944|233168|expressed sequence AI987944	BC099396|AI987944|233168|expressed sequence AI987944
mm9_v1_chr13_-_35011860_35011863	0.0167181	FOXD3.p2	NM_027967|1700026J04Rik|71864|RIKEN cDNA 1700026J04 gene	AK139828|1700026J04Rik|71864|RIKEN cDNA 1700026J04 gene
mm9_v1_chr9_+_96159123_96159160	0.0164772	FOXD3.p2	NM_001184709|Tfdp2|211586|transcription factor Dp 2	AK033356|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr15_-_35085306_35085560	0.0162001	FOXD3.p2	AF271361|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	BC049123|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	U28726|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	AY058922|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	BC037440|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)	NM_019635|Stk3|56274|serine/threonine kinase 3 (Ste20, yeast homolog)
mm9_v1_chr9_-_123893240_123893240	0.0159404	FOXD3.p2	BC127143|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	BC128466|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1	NM_007718|Ccr1l1|12770|chemokine (C-C motif) receptor 1-like 1
mm9_v1_chr10_-_127986030_127986175	0.0149578	FOXD3.p2	U93862|Rpl41|67945|ribosomal protein L41	BC099380|Rpl41|67945|ribosomal protein L41	BC081450|Rpl41|67945|ribosomal protein L41	BC083066|Rpl41|67945|ribosomal protein L41	BC092010|Rpl41|67945|ribosomal protein L41	AK019178|Rpl41|67945|ribosomal protein L41	AK010564|Rpl41|67945|ribosomal protein L41	AK002503|Rpl41|67945|ribosomal protein L41	AK008901|Rpl41|67945|ribosomal protein L41	AK010585|Rpl41|67945|ribosomal protein L41	AK012252|Rpl41|67945|ribosomal protein L41	AK012487|Rpl41|67945|ribosomal protein L41	AK028126|Rpl41|67945|ribosomal protein L41	AK028263|Rpl41|67945|ribosomal protein L41	AK168485|Rpl41|67945|ribosomal protein L41	AK168653|Rpl41|67945|ribosomal protein L41	AK168719|Rpl41|67945|ribosomal protein L41	BC089572|Rpl41|67945|ribosomal protein L41	AK012476|Rpl41|67945|ribosomal protein L41	AK151566|Rpl41|67945|ribosomal protein L41	AK007874|Rpl41|67945|ribosomal protein L41	AK009548|Rpl41|67945|ribosomal protein L41	AK010246|Rpl41|67945|ribosomal protein L41	AK010317|Rpl41|67945|ribosomal protein L41	AK010482|Rpl41|67945|ribosomal protein L41	AK010509|Rpl41|67945|ribosomal protein L41	AK010583|Rpl41|67945|ribosomal protein L41	AK013324|Rpl41|67945|ribosomal protein L41	AK019049|Rpl41|67945|ribosomal protein L41	AK150502|Rpl41|67945|ribosomal protein L41	AK160588|Rpl41|67945|ribosomal protein L41	AK168107|Rpl41|67945|ribosomal protein L41	BC089573|Rpl41|67945|ribosomal protein L41	BC100592|Rpl41|67945|ribosomal protein L41	BC145727|Rpl41|67945|ribosomal protein L41	BC145729|Rpl41|67945|ribosomal protein L41	AK012450|Rpl41|67945|ribosomal protein L41	AK028231|Rpl41|67945|ribosomal protein L41
mm9_v1_chr4_+_97444450_97444485	0.0147004	FOXD3.p2	AK054310|Nfia|18027|nuclear factor I/A	AK137731|Nfia|18027|nuclear factor I/A
mm9_v1_chr2_-_106814482_106814618	0.0145303	FOXD3.p2	BC054106|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK038273|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK134965|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK165082|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	AK012215|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	NM_001025102|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene
mm9_v1_chr6_-_115684968_115684968	0.0143176	FOXD3.p2	AK078864|Tmem40|94346|transmembrane protein 40	NM_001168259|Tmem40|94346|transmembrane protein 40
mm9_v1_chr8_+_114167342_114167436	0.0142537	FOXD3.p2	NM_001037665|Zfp1|22640|zinc finger protein 1	NM_011742|Zfp1|22640|zinc finger protein 1	BC025141|Zfp1|22640|zinc finger protein 1	AK147054|Zfp1|22640|zinc finger protein 1	AK153830|Zfp1|22640|zinc finger protein 1	BC055796|Zfp1|22640|zinc finger protein 1	BC062970|Zfp1|22640|zinc finger protein 1	AK134452|Zfp1|22640|zinc finger protein 1
mm9_v1_chr4_+_63205780_63205910	0.0141021	FOXD3.p2	NM_024173|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK081611|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK007596|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK010131|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK168972|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK169079|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK088712|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	BC003429|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK003563|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK152699|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AK159558|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	AB076406|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1	BC088836|Atp6v1g1|66290|ATPase, H+ transporting, lysosomal V1 subunit G1
mm9_v1_chr3_+_89234758_89234758	0.0136313	FOXD3.p2	AK132759|Pygo2|68911|pygopus 2	NM_026869|Pygo2|68911|pygopus 2
mm9_v1_chr15_-_59848167_59848172	0.0128903	FOXD3.p2	AK016789|4933412E24Rik|71088|RIKEN cDNA 4933412E24 gene	NM_027668|4933412E24Rik|71088|RIKEN cDNA 4933412E24 gene
mm9_v1_chr6_+_35202653_35202668	0.0126905	FOXD3.p2	AK082166|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene
mm9_v1_chr11_+_87218566_87218566	0.012312	FOXD3.p2	AY193717|Tex14|83560|testis expressed gene 14	NM_031386|Tex14|83560|testis expressed gene 14
mm9_v1_chrX_-_151582391_151582391	0.0117026	FOXD3.p2	BC100353|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene	NM_001081671|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene
mm9_v1_chr2_+_112102082_112102129	0.0115771	FOXD3.p2	AK004120|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	AK012875|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	NM_025403|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)	BC028497|Nop10|66181|NOP10 ribonucleoprotein homolog (yeast)
mm9_v1_chr3_-_94846454_94846515	0.0111822	FOXD3.p2	AB029146|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC009005|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029144|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AK010969|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029142|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029143|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AB029145|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AF013099|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AF175574|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	NM_008951|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC016433|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	AK145524|Psmd4|19185|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
mm9_v1_chr6_+_128349783_128350065	0.0103257	FOXD3.p2	AJ278170|Nrip2|60345|nuclear receptor interacting protein 2	NM_001162858|Nrip2|60345|nuclear receptor interacting protein 2	NM_021717|Nrip2|60345|nuclear receptor interacting protein 2	AK156526|Nrip2|60345|nuclear receptor interacting protein 2	AK134689|Nrip2|60345|nuclear receptor interacting protein 2	BC115523|Nrip2|60345|nuclear receptor interacting protein 2	BC094230|Nrip2|60345|nuclear receptor interacting protein 2
mm9_v1_chr16_+_58408533_58408602	0.0102595	FOXD3.p2	AF442820|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2	AF387548|Dcbld2|73379|discoidin, CUB and LCCL domain containing 2
mm9_v1_chr4_+_154230308_154230456	0.0101004	FOXD3.p2	NM_172878|Ttc34|242800|tetratricopeptide repeat domain 34	AK030055|Ttc34|242800|tetratricopeptide repeat domain 34	BC068299|Ttc34|242800|tetratricopeptide repeat domain 34
mm9_v1_chr1_-_141755209_141755302	0.00989366	FOXD3.p2	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chr6_+_71859046_71859156	0.00983251	FOXD3.p2	AK031689|Polr1a|20019|polymerase (RNA) I polypeptide A	AK160970|Polr1a|20019|polymerase (RNA) I polypeptide A	NM_009088|Polr1a|20019|polymerase (RNA) I polypeptide A	AK147379|Polr1a|20019|polymerase (RNA) I polypeptide A	AK160785|Polr1a|20019|polymerase (RNA) I polypeptide A	BC034785|Polr1a|20019|polymerase (RNA) I polypeptide A	AK045809|Polr1a|20019|polymerase (RNA) I polypeptide A	AK082883|Polr1a|20019|polymerase (RNA) I polypeptide A	BC053744|Polr1a|20019|polymerase (RNA) I polypeptide A	BC010254|Polr1a|20019|polymerase (RNA) I polypeptide A	BC049190|Polr1a|20019|polymerase (RNA) I polypeptide A	AF000938|Polr1a|20019|polymerase (RNA) I polypeptide A
mm9_v1_chr5_-_23012407_23012525	0.00944878	FOXD3.p2	AK044922|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK201776|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr6_+_135313056_135313087	0.00867087	FOXD3.p2	AK168806|Emp1|13730|epithelial membrane protein 1	U25633|Emp1|13730|epithelial membrane protein 1	BC138491|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr5_+_22988226_22988243	0.00863426	FOXD3.p2	
mm9_v1_chr3_-_124128908_124128956	0.0085705	FOXD3.p2	AK005660|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene	BC137977|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene	NM_027939|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene	AK132965|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene
mm9_v1_chrX_-_67618235_67618286	0.00855057	FOXD3.p2	AK132287|Ids|15931|iduronate 2-sulfatase	AK085237|Ids|15931|iduronate 2-sulfatase	AF538870|Ids|15931|iduronate 2-sulfatase	NM_010498|Ids|15931|iduronate 2-sulfatase
mm9_v1_chr15_-_66801198_66801204	0.0078529	FOXD3.p2	AK170439|Ndrg1|17988|N-myc downstream regulated gene 1	AK004548|Ndrg1|17988|N-myc downstream regulated gene 1	AK098075|Ndrg1|17988|N-myc downstream regulated gene 1	AK161860|Ndrg1|17988|N-myc downstream regulated gene 1	AK165007|Ndrg1|17988|N-myc downstream regulated gene 1	AK170281|Ndrg1|17988|N-myc downstream regulated gene 1	AK170636|Ndrg1|17988|N-myc downstream regulated gene 1	U60593|Ndrg1|17988|N-myc downstream regulated gene 1	AK170809|Ndrg1|17988|N-myc downstream regulated gene 1	NM_008681|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr3_+_92748407_92748407	0.00782935	FOXD3.p2	AF176515|Lce3c|94060|late cornified envelope 3C	AK009036|Lce3c|94060|late cornified envelope 3C	NM_033175|Lce3c|94060|late cornified envelope 3C
mm9_v1_chr6_-_71858736_71858760	0.00727141	FOXD3.p2	AK032831|Ptcd3|69956|pentatricopeptide repeat domain 3	AK011665|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146005|Ptcd3|69956|pentatricopeptide repeat domain 3	AK172480|Ptcd3|69956|pentatricopeptide repeat domain 3	BC115434|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146172|Ptcd3|69956|pentatricopeptide repeat domain 3	NM_027275|Ptcd3|69956|pentatricopeptide repeat domain 3
mm9_v1_chr11_-_5662259_5662400	0.00725239	FOXD3.p2	BC066994|Urgcp|72046|upregulator of cell proliferation	AK035580|Urgcp|72046|upregulator of cell proliferation	AK041953|Urgcp|72046|upregulator of cell proliferation	NM_001077661|Urgcp|72046|upregulator of cell proliferation	AK037923|Urgcp|72046|upregulator of cell proliferation	AK053862|Urgcp|72046|upregulator of cell proliferation
mm9_v1_chr18_+_54021746_54021814	0.00691631	FOXD3.p2	AK049379|Csnk1g3|70425|casein kinase 1, gamma 3	NM_152809|Csnk1g3|70425|casein kinase 1, gamma 3	AK080491|Csnk1g3|70425|casein kinase 1, gamma 3
mm9_v1_chr4_+_43575487_43575594	0.00675923	FOXD3.p2	AK132785|Creb3|12913|cAMP responsive element binding protein 3	AK144208|Creb3|12913|cAMP responsive element binding protein 3	NM_013497|Creb3|12913|cAMP responsive element binding protein 3	AK090077|Creb3|12913|cAMP responsive element binding protein 3	BC002094|Creb3|12913|cAMP responsive element binding protein 3
mm9_v1_chr2_-_110145870_110145899	0.00657295	FOXD3.p2	BC019406|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)	NM_130452|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)	AK050010|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)
mm9_v1_chr6_-_122692407_122692520	0.00615307	FOXD3.p2	CT010354|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	M75135|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	X61093|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC050095|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	AK155997|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC034122|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	BC058811|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr15_+_9001008_9001083	0.0060228	FOXD3.p2	AK046666|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001040395|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001085410|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr2_+_125499056_125499110	0.00565281	FOXD3.p2	AK172612|Eid1|58521|EP300 interacting inhibitor of differentiation 1
mm9_v1_chr11_+_60513191_60513346	0.005311	FOXD3.p2	NM_001159404|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_001159405|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	NM_008502|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC055399|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	AK159412|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	D16141|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)	BC050913|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)
mm9_v1_chr1_+_194999662_194999887	0.00524358	FOXD3.p2	AK077339|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene	NM_001160360|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene	NM_001160359|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene	NM_181048|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene	AK037364|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene	BC055955|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene	AK047686|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene	AK084448|A130010J15Rik|319266|RIKEN cDNA A130010J15 gene
mm9_v1_chr9_-_114405661_114405661	0.00517116	FOXD3.p2	AK042013|Ccr4|12773|chemokine (C-C motif) receptor 4	BC117041|Ccr4|12773|chemokine (C-C motif) receptor 4	BC119171|Ccr4|12773|chemokine (C-C motif) receptor 4	NM_009916|Ccr4|12773|chemokine (C-C motif) receptor 4
mm9_v1_chr6_+_125072851_125072907	0.00511429	FOXD3.p2	AK148402|Chd4|107932|chromodomain helicase DNA binding protein 4
mm9_v1_chr19_-_6532339_6532383	0.00478155	FOXD3.p2	AK045662|Gm14964|100008567|predicted gene 14964
mm9_v1_chr3_+_14533787_14533872	0.00430769	FOXD3.p2	AK004646|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_001163579|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_001163580|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	NM_028915|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC138734|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC138735|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC099680|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	BC061202|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK030355|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK016559|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK173256|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1	AK029563|Lrrcc1|71710|leucine rich repeat and coiled-coil domain containing 1
mm9_v1_chr11_-_101646571_101646623	0.00421934	FOXD3.p2	AK166136|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144590|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144538|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	NM_008815|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr12_-_30817451_30817473	0.00379736	FOXD3.p2	AK047843|Tpo|22018|thyroid peroxidase	NM_009417|Tpo|22018|thyroid peroxidase	X60703|Tpo|22018|thyroid peroxidase
mm9_v1_chr17_+_80615253_80615253	0.0036366	FOXD3.p2	BC118946|Ttc39d|67737|tetratricopeptide repeat domain 39D	BC118947|Ttc39d|67737|tetratricopeptide repeat domain 39D	NM_026351|Ttc39d|67737|tetratricopeptide repeat domain 39D
mm9_v1_chr9_+_72892697_72892708	0.00345248	FOXD3.p2	AK010373|Rab27a|11891|RAB27A, member RAS oncogene family
mm9_v1_chr5_-_42099382_42099426	0.00328014	FOXD3.p2	AK159493|Rab28|100972|RAB28, member RAS oncogene family	BC004580|Rab28|100972|RAB28, member RAS oncogene family	NM_027295|Rab28|100972|RAB28, member RAS oncogene family	AK012286|Rab28|100972|RAB28, member RAS oncogene family
mm9_v1_chr6_-_13788580_13788612	0.00315682	FOXD3.p2	AK047740|Gpr85|64450|G protein-coupled receptor 85
mm9_v1_chr5_-_149363989_149364264	0.00293849	FOXD3.p2	BC025595|Ubl3|24109|ubiquitin-like 3	AK145952|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr10_+_18127443_18127504	0.00288888	FOXD3.p2	AK041760|Nhsl1|215819|NHS-like 1	AK017530|Nhsl1|215819|NHS-like 1	NM_173390|Nhsl1|215819|NHS-like 1	AK038892|Nhsl1|215819|NHS-like 1
mm9_v1_chr11_+_98543871_98543951	0.00259219	FOXD3.p2	AK031366|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145467|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145488|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164593|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK169690|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166714|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167005|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164333|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166683|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK089933|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167285|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK077252|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK165520|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK153505|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr1_-_152840432_152840584	0.00210678	FOXD3.p2	BC147549|Hmcn1|545370|hemicentin 1	BC147568|Hmcn1|545370|hemicentin 1	AK052713|Hmcn1|545370|hemicentin 1	NM_001024720|Hmcn1|545370|hemicentin 1
mm9_v1_chr14_+_70167278_70167338	0.00183334	FOXD3.p2	AK050753|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	NM_020275|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK080069|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK145730|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK154993|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	BC065141|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AB031081|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr17_+_6106858_6106923	0.00156082	FOXD3.p2	AK170084|Tulp4|68842|tubby like protein 4	AK160104|Tulp4|68842|tubby like protein 4	AK147643|Tulp4|68842|tubby like protein 4
mm9_v1_chr5_-_100158034_100158083	0.00101083	FOXD3.p2	AK048739|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK086859|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK044414|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK050558|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene
mm9_v1_chr15_+_99239550_99239559	0.000881776	FOXD3.p2	BC018591|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr6_-_30341017_30341032	0.00078524	FOXD3.p2	AK168071|Zc3hc1|232679|zinc finger, C3HC type 1	AK146228|Zc3hc1|232679|zinc finger, C3HC type 1	AK167992|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr18_-_43952520_43952536	0.000195838	FOXD3.p2	BC147098|Gm94|225443|predicted gene 94	BC147099|Gm94|225443|predicted gene 94	BC171995|Gm94|225443|predicted gene 94	AK131908|Gm94|225443|predicted gene 94	AK131907|Gm94|225443|predicted gene 94	NM_001033280|Gm94|225443|predicted gene 94
mm9_v1_chr1_-_121809744_121809749	0.00016838	FOXD3.p2	BC094344|Tmem177|66343|transmembrane protein 177	NM_175106|Tmem177|66343|transmembrane protein 177	AK009043|Tmem177|66343|transmembrane protein 177	AK076108|Tmem177|66343|transmembrane protein 177
