mm9_v1_chr9_+_7792286_7792314	15.4523	FOXQ1.p2	AK150630|Tmem123|71929|transmembrane protein 123
mm9_v1_chr8_-_124948837_124948876	14.5894	FOXQ1.p2	
mm9_v1_chr1_-_140071818_140071883	14.4915	FOXQ1.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chrX_-_100678555_100678592	14.3516	FOXQ1.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr17_-_51878720_51878731	14.057	FOXQ1.p2	AK081385|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr17_+_34442808_34442831	12.7265	FOXQ1.p2	NM_010382|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr17_+_34442837_34442976	12.3481	FOXQ1.p2	AK155968|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52642|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132165|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132163|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	AK160485|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52641|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X07239|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36940|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90032|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28489|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28490|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36939|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90275|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X00958|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M28408|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr11_-_83388330_83388380	11.8305	FOXQ1.p2	AK151953|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr10_+_96942124_96942154	10.5138	FOXQ1.p2	NM_001190451|Dcn|13179|decorin
mm9_v1_chr9_+_50302624_50302649	9.61969	FOXQ1.p2	AK005558|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AY364436|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	NM_029639|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AK002767|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC017624|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC022950|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene
mm9_v1_chr16_+_43321404_43321450	9.57961	FOXQ1.p2	
mm9_v1_chr14_-_122314994_122315068	8.58403	FOXQ1.p2	AK172401|Gpr18|110168|G protein-coupled receptor 18	BC034872|Gpr18|110168|G protein-coupled receptor 18	NM_182806|Gpr18|110168|G protein-coupled receptor 18	AK157029|Gpr18|110168|G protein-coupled receptor 18	AK156868|Gpr18|110168|G protein-coupled receptor 18	AK156039|Gpr18|110168|G protein-coupled receptor 18
mm9_v1_chr6_-_48658182_48658205	7.97595	FOXQ1.p2	AK050328|Gimap6|231931|GTPase, IMAP family member 6	AK160244|Gimap6|231931|GTPase, IMAP family member 6	BC028779|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr1_+_173770709_173770788	7.95573	FOXQ1.p2	NM_013489|Cd84|12523|CD84 antigen	AF043445|Cd84|12523|CD84 antigen	AK171067|Cd84|12523|CD84 antigen	AK037385|Cd84|12523|CD84 antigen	AK040694|Cd84|12523|CD84 antigen	AK156464|Cd84|12523|CD84 antigen	AK157075|Cd84|12523|CD84 antigen	BC140952|Cd84|12523|CD84 antigen	BC144736|Cd84|12523|CD84 antigen	AK154834|Cd84|12523|CD84 antigen	AB196812|Cd84|12523|CD84 antigen	AB196813|Cd84|12523|CD84 antigen	AB196814|Cd84|12523|CD84 antigen	AB196815|Cd84|12523|CD84 antigen
mm9_v1_chr10_+_96944961_96945010	7.94669	FOXQ1.p2	NM_007833|Dcn|13179|decorin	AK147020|Dcn|13179|decorin
mm9_v1_chr1_-_175805812_175805992	7.86656	FOXQ1.p2	AK087931|Mndal|100040462|myeloid nuclear differentiation antigen like	FJ594740|Mndal|100040462|myeloid nuclear differentiation antigen like
mm9_v1_chr14_+_79915429_79915530	7.52169	FOXQ1.p2	AK132456|Elf1|13709|E74-like factor 1	U19617|Elf1|13709|E74-like factor 1	AK156098|Elf1|13709|E74-like factor 1	BC037743|Elf1|13709|E74-like factor 1	BC027532|Elf1|13709|E74-like factor 1	BC053914|Elf1|13709|E74-like factor 1
mm9_v1_chr4_+_102243132_102243254	7.5084	FOXQ1.p2	AK171700|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK150868|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr5_+_88746336_88746345	7.2746	FOXQ1.p2	NM_008644|Prol1|17830|proline rich, lacrimal 1	U37531|Prol1|17830|proline rich, lacrimal 1	BC042902|Prol1|17830|proline rich, lacrimal 1	BC021158|Prol1|17830|proline rich, lacrimal 1	AF247816|Prol1|17830|proline rich, lacrimal 1	BC021401|Prol1|17830|proline rich, lacrimal 1
mm9_v1_chr7_+_148645664_148645872	7.13313	FOXQ1.p2	BC026807|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chr1_-_140071630_140071766	7.04477	FOXQ1.p2	M11934|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M92933|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr5_-_17341534_17341556	6.98664	FOXQ1.p2	L23108|Cd36|12491|CD36 antigen	AK151355|Cd36|12491|CD36 antigen
mm9_v1_chr1_-_195068455_195068557	6.93871	FOXQ1.p2	DQ089001|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	S75207|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK149518|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	AK165212|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1	NM_001044751|Hsd11b1|15483|hydroxysteroid 11-beta dehydrogenase 1
mm9_v1_chr6_-_48658211_48658242	6.88026	FOXQ1.p2	AK030902|Gimap6|231931|GTPase, IMAP family member 6	AK087275|Gimap6|231931|GTPase, IMAP family member 6	AF503921|Gimap6|231931|GTPase, IMAP family member 6	NM_153175|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr15_-_74828317_74828336	6.8134	FOXQ1.p2	BC002070|Ly6a|110454|lymphocyte antigen 6 complex, locus A	NM_010738|Ly6a|110454|lymphocyte antigen 6 complex, locus A	X04653|Ly6a|110454|lymphocyte antigen 6 complex, locus A	J03636|Ly6a|110454|lymphocyte antigen 6 complex, locus A	AK076200|Ly6a|110454|lymphocyte antigen 6 complex, locus A
mm9_v1_chr6_+_97941776_97941914	6.76067	FOXQ1.p2	NM_008601|Mitf|17342|microphthalmia-associated transcription factor	U19875|Mitf|17342|microphthalmia-associated transcription factor	Z23066|Mitf|17342|microphthalmia-associated transcription factor	BC108976|Mitf|17342|microphthalmia-associated transcription factor	BC108977|Mitf|17342|microphthalmia-associated transcription factor	AB221657|Mitf|17342|microphthalmia-associated transcription factor
mm9_v1_chr3_-_105970438_105970481	6.64579	FOXQ1.p2	D87757|Chi3l3|12655|chitinase 3-like 3	M94584|Chi3l3|12655|chitinase 3-like 3	AK154420|Chi3l3|12655|chitinase 3-like 3	BC061154|Chi3l3|12655|chitinase 3-like 3	AK137503|Chi3l3|12655|chitinase 3-like 3	NM_009892|Chi3l3|12655|chitinase 3-like 3
mm9_v1_chr7_+_117916117_117916304	6.63412	FOXQ1.p2	BC040366|Ampd3|11717|adenosine monophosphate deaminase 3	NM_009667|Ampd3|11717|adenosine monophosphate deaminase 3	AK133465|Ampd3|11717|adenosine monophosphate deaminase 3	BC056380|Ampd3|11717|adenosine monophosphate deaminase 3	AK171276|Ampd3|11717|adenosine monophosphate deaminase 3
mm9_v1_chr7_+_129776837_129777102	6.62783	FOXQ1.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr15_-_74879242_74879259	6.61266	FOXQ1.p2	AK088782|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	AK143577|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	BC010764|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	NM_010741|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1
mm9_v1_chr7_+_97357406_97357492	6.591	FOXQ1.p2	AK163129|Picalm|233489|phosphatidylinositol binding clathrin assembly protein
mm9_v1_chr7_-_113358823_113358853	6.57165	FOXQ1.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr7_-_113102453_113102483	6.57165	FOXQ1.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr1_+_45390415_45390462	6.51123	FOXQ1.p2	BC039923|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr16_-_88563421_88563427	6.45704	FOXQ1.p2	AK133810|Cldn8|54420|claudin 8	NM_018778|Cldn8|54420|claudin 8
mm9_v1_chr7_+_86058650_86058744	6.39299	FOXQ1.p2	NM_020583|Isg20|57444|interferon-stimulated protein	BC022751|Isg20|57444|interferon-stimulated protein	AK136756|Isg20|57444|interferon-stimulated protein
mm9_v1_chrX_+_12870471_12870561	6.3892	FOXQ1.p2	AK002917|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr1_-_192994532_192994569	6.38604	FOXQ1.p2	AK217100|Atf3|11910|activating transcription factor 3
mm9_v1_chr7_+_86058817_86058936	6.19428	FOXQ1.p2	AK005528|Isg20|57444|interferon-stimulated protein
mm9_v1_chr7_+_17659388_17659431	6.13446	FOXQ1.p2	BC030357|Psg16|26436|pregnancy specific glycoprotein 16	NM_007676|Psg16|26436|pregnancy specific glycoprotein 16	U34272|Psg16|26436|pregnancy specific glycoprotein 16
mm9_v1_chr10_-_61960613_61960625	6.13005	FOXQ1.p2	AK087960|Srgn|19073|serglycin
mm9_v1_chr17_+_23949101_23949124	6.10244	FOXQ1.p2	AK081577|Srrm2|75956|serine/arginine repetitive matrix 2
mm9_v1_chr6_+_41810237_41810337	6.08128	FOXQ1.p2	BC119343|Sval2|84543|seminal vesicle antigen-like 2	BC119345|Sval2|84543|seminal vesicle antigen-like 2	AB050614|Sval2|84543|seminal vesicle antigen-like 2	NM_032542|Sval2|84543|seminal vesicle antigen-like 2
mm9_v1_chr15_+_3230053_3230123	6.06846	FOXQ1.p2	
mm9_v1_chr1_-_173579128_173579145	6.05376	FOXQ1.p2	AK040678|Slamf7|75345|SLAM family member 7	AK089525|Slamf7|75345|SLAM family member 7
mm9_v1_chr16_-_88563379_88563403	6.0152	FOXQ1.p2	BC003868|Cldn8|54420|claudin 8
mm9_v1_chr2_+_13504271_13504305	6.00301	FOXQ1.p2	
mm9_v1_chr10_-_36855292_36855411	5.93803	FOXQ1.p2	AK082623|Marcks|17118|myristoylated alanine rich protein kinase C substrate	AK136452|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr17_+_34375847_34375923	5.90168	FOXQ1.p2	AK172191|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155650|H2-Ob|15002|histocompatibility 2, O region beta locus	NM_010389|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172273|H2-Ob|15002|histocompatibility 2, O region beta locus	AK172299|H2-Ob|15002|histocompatibility 2, O region beta locus	AK155144|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127027|H2-Ob|15002|histocompatibility 2, O region beta locus	BC127028|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100707|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100710|H2-Ob|15002|histocompatibility 2, O region beta locus	BC100709|H2-Ob|15002|histocompatibility 2, O region beta locus
mm9_v1_chr3_+_52153283_52153283	5.78774	FOXQ1.p2	AK054289|Foxo1|56458|forkhead box O1
mm9_v1_chr8_+_36740640_36740782	5.75853	FOXQ1.p2	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr6_-_129572590_129572688	5.71402	FOXQ1.p2	AY860972|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	CT010384|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AF039026|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	BC057147|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK040436|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_033078|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr2_+_145647868_145648056	5.69272	FOXQ1.p2	AK152893|Rin2|74030|Ras and Rab interactor 2	AK150680|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr2_-_44965603_44965763	5.58883	FOXQ1.p2	AK012377|Zeb2|24136|zinc finger E-box binding homeobox 2	AF033116|Zeb2|24136|zinc finger E-box binding homeobox 2	AK141157|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr2_-_163462584_163462669	5.57914	FOXQ1.p2	AK128955|Serinc3|26943|serine incorporator 3
mm9_v1_chr2_+_158157639_158157652	5.55789	FOXQ1.p2	AJ010499|Lbp|16803|lipopolysaccharide binding protein
mm9_v1_chr1_-_52714729_52714742	5.50991	FOXQ1.p2	BC016598|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr7_-_110962324_110962382	5.50439	FOXQ1.p2	AB020013|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020015|Hbb-b1|15129|hemoglobin, beta adult major chain	AB020017|Hbb-b2|15130|hemoglobin, beta adult minor chain	AB364477|Hbb-b1|15129|hemoglobin, beta adult major chain	AB364478|Hbb-b2|15130|hemoglobin, beta adult minor chain	AF149782|Hbb-b2|15130|hemoglobin, beta adult minor chain
mm9_v1_chr1_+_19202046_19202134	5.31554	FOXQ1.p2	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr5_-_17341512_17341522	5.17951	FOXQ1.p2	AK052825|Cd36|12491|CD36 antigen
mm9_v1_chr1_+_59543450_59543567	5.10167	FOXQ1.p2	
mm9_v1_chr1_-_45460310_45460349	5.06276	FOXQ1.p2	BC043696|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr3_-_20142068_20142081	5.04085	FOXQ1.p2	BC108409|Cpa3|12873|carboxypeptidase A3, mast cell	J05118|Cpa3|12873|carboxypeptidase A3, mast cell	AK088906|Cpa3|12873|carboxypeptidase A3, mast cell	NM_007753|Cpa3|12873|carboxypeptidase A3, mast cell
mm9_v1_chr15_+_3220766_3220979	5.03372	FOXQ1.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr15_+_3220994_3220998	4.9958	FOXQ1.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr12_-_104681842_104681891	4.90122	FOXQ1.p2	AY090098|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK040279|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK160503|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC086889|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC100588|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	NM_029803|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A
mm9_v1_chr5_+_88431549_88431605	4.89391	FOXQ1.p2	NM_011422|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71629|Smr3a|20599|submaxillary gland androgen regulated protein 3A	X71631|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC035428|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC034553|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC055857|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031806|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC141243|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC145569|Smr3a|20599|submaxillary gland androgen regulated protein 3A	BC031921|Smr3a|20599|submaxillary gland androgen regulated protein 3A
mm9_v1_chr1_+_45401303_45401332	4.89336	FOXQ1.p2	AK159868|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr19_+_25073995_25074066	4.84862	FOXQ1.p2	AK050543|Dock8|76088|dedicator of cytokinesis 8	NM_028785|Dock8|76088|dedicator of cytokinesis 8	BC141358|Dock8|76088|dedicator of cytokinesis 8	AK170538|Dock8|76088|dedicator of cytokinesis 8
mm9_v1_chr19_-_41289045_41289143	4.84067	FOXQ1.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr19_+_7631935_7632013	4.83815	FOXQ1.p2	AK163505|Pla2g16|225845|phospholipase A2, group XVI	NM_139269|Pla2g16|225845|phospholipase A2, group XVI	AX775891|Pla2g16|225845|phospholipase A2, group XVI	AK052657|Pla2g16|225845|phospholipase A2, group XVI	AK039703|Pla2g16|225845|phospholipase A2, group XVI	AK042007|Pla2g16|225845|phospholipase A2, group XVI	BC024581|Pla2g16|225845|phospholipase A2, group XVI
mm9_v1_chr15_-_42508294_42508522	4.71291	FOXQ1.p2	U83509|Angpt1|11600|angiopoietin 1	BC067410|Angpt1|11600|angiopoietin 1	NM_009640|Angpt1|11600|angiopoietin 1	AK172868|Angpt1|11600|angiopoietin 1	AK012027|Angpt1|11600|angiopoietin 1	AK088439|Angpt1|11600|angiopoietin 1
mm9_v1_chr6_-_69494873_69494938	4.70972	FOXQ1.p2	J04610|Igkv4-57-1|384514|immunoglobulin kappa variable 4-57-1
mm9_v1_chr19_-_41068625_41068698	4.64856	FOXQ1.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr1_-_75132608_75132617	4.64606	FOXQ1.p2	AK188612|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK199117|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK200010|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK210625|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr19_+_11518042_11518091	4.60097	FOXQ1.p2	AK088780|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK080934|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	NM_021718|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK039824|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK037569|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK138737|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK172495|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF230640|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF237913|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AF354929|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	BC028433|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B	AK088631|Ms4a4b|60361|membrane-spanning 4-domains, subfamily A, member 4B
mm9_v1_chr15_+_3220999_3221005	4.57291	FOXQ1.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr6_-_130287518_130287643	4.53059	FOXQ1.p2	U56404|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U56405|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC101952|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103543|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103544|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103545|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132524|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132526|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145192|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145193|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U10305|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	AK159595|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U49868|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	NM_010648|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U09739|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3
mm9_v1_chr1_-_55044032_55044295	4.47128	FOXQ1.p2	AK077993|Sf3b1|81898|splicing factor 3b, subunit 1	AK087700|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr7_-_110962416_110962439	4.42065	FOXQ1.p2	BC027434|Hbb-b2|15130|hemoglobin, beta adult minor chain	BC032264|Hbb-b2|15130|hemoglobin, beta adult minor chain	NM_016956|Hbb-b2|15130|hemoglobin, beta adult minor chain	AK168412|Hbb-b1|15129|hemoglobin, beta adult major chain	AK002394|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005496|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011033|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011050|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011052|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011057|Hbb-b1|15129|hemoglobin, beta adult major chain	AK012551|Hbb-b1|15129|hemoglobin, beta adult major chain	AK167615|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168477|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168584|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168819|Hbb-b1|15129|hemoglobin, beta adult major chain	AK028067|Hbb-b1|15129|hemoglobin, beta adult major chain	NM_008220|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr1_-_173579057_173579105	4.4067	FOXQ1.p2	AB196816|Slamf7|75345|SLAM family member 7	AB196817|Slamf7|75345|SLAM family member 7	AB196818|Slamf7|75345|SLAM family member 7	AB196819|Slamf7|75345|SLAM family member 7	AB196837|Slamf7|75345|SLAM family member 7	AF467909|Slamf7|75345|SLAM family member 7	AF467910|Slamf7|75345|SLAM family member 7	AF467911|Slamf7|75345|SLAM family member 7	BC011154|Slamf7|75345|SLAM family member 7	AK172665|Slamf7|75345|SLAM family member 7
mm9_v1_chr14_-_55725370_55725429	4.3853	FOXQ1.p2	AK052384|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	BC080798|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	BC108374|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	AK151844|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	AK147177|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit	NM_007455|Ap1g2|11766|adaptor protein complex AP-1, gamma 2 subunit
mm9_v1_chr5_+_104728299_104728323	4.37571	FOXQ1.p2	NM_008318|Ibsp|15891|integrin binding sialoprotein	AK132371|Ibsp|15891|integrin binding sialoprotein	L23801|Ibsp|15891|integrin binding sialoprotein	BC045143|Ibsp|15891|integrin binding sialoprotein	AK162640|Ibsp|15891|integrin binding sialoprotein	L20232|Ibsp|15891|integrin binding sialoprotein
mm9_v1_chr16_+_48872720_48872733	4.30856	FOXQ1.p2	NM_181596|Retnlg|245195|resistin like gamma
mm9_v1_chr6_+_70648433_70648461	4.30567	FOXQ1.p2	M83099|Igkv3-2|626583|immunoglobulin kappa variable 3-2
mm9_v1_chr5_+_88314719_88314719	4.29902	FOXQ1.p2	EF113909|Odam|69592|odontogenic, ameloblast asssociated	NM_027128|Odam|69592|odontogenic, ameloblast asssociated
mm9_v1_chr9_-_110959702_110959793	4.28903	FOXQ1.p2	AF030185|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK145946|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK007808|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	NM_017466|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr4_+_102242664_102242699	4.26372	FOXQ1.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr1_-_173537404_173537546	4.23037	FOXQ1.p2	M84412|Ly9|17085|lymphocyte antigen 9	BC055380|Ly9|17085|lymphocyte antigen 9	BC066212|Ly9|17085|lymphocyte antigen 9	AB196804|Ly9|17085|lymphocyte antigen 9	AB196805|Ly9|17085|lymphocyte antigen 9	AB196806|Ly9|17085|lymphocyte antigen 9	AB196807|Ly9|17085|lymphocyte antigen 9	AK087345|Ly9|17085|lymphocyte antigen 9	BC095921|Ly9|17085|lymphocyte antigen 9	AK134106|Ly9|17085|lymphocyte antigen 9	AK150121|Ly9|17085|lymphocyte antigen 9	AK042288|Ly9|17085|lymphocyte antigen 9	AK088815|Ly9|17085|lymphocyte antigen 9	AK040306|Ly9|17085|lymphocyte antigen 9	NM_008534|Ly9|17085|lymphocyte antigen 9	AF244130|Ly9|17085|lymphocyte antigen 9	AF244131|Ly9|17085|lymphocyte antigen 9
mm9_v1_chr11_+_67013553_67013615	4.21252	FOXQ1.p2	DQ021871|Myh1|17879|myosin, heavy polypeptide 1, skeletal muscle, adult	AK041122|Myh1|17879|myosin, heavy polypeptide 1, skeletal muscle, adult	AY963800|Myh1|17879|myosin, heavy polypeptide 1, skeletal muscle, adult	BC108329|Myh1|17879|myosin, heavy polypeptide 1, skeletal muscle, adult	NM_030679|Myh1|17879|myosin, heavy polypeptide 1, skeletal muscle, adult
mm9_v1_chr6_+_41797547_41797583	4.20929	FOXQ1.p2	AK138795|Pip|18716|prolactin induced protein	NM_008843|Pip|18716|prolactin induced protein	S73282|Pip|18716|prolactin induced protein	X02510|Pip|18716|prolactin induced protein	BC028889|Pip|18716|prolactin induced protein	AB017907|Pip|18716|prolactin induced protein	BC018264|Pip|18716|prolactin induced protein
mm9_v1_chr5_-_17341713_17341713	4.20716	FOXQ1.p2	NM_001159555|Cd36|12491|CD36 antigen	NM_007643|Cd36|12491|CD36 antigen
mm9_v1_chr7_+_25682507_25682533	4.20156	FOXQ1.p2	AK143605|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	NM_007655|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	X13450|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)	BC027633|Cd79a|12518|CD79A antigen (immunoglobulin-associated alpha)
mm9_v1_chr9_-_70452528_70452545	4.14449	FOXQ1.p2	AK041072|Fam63b|235461|family with sequence similarity 63, member B
mm9_v1_chr1_-_196957466_196957592	4.13634	FOXQ1.p2	M23446|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC092048|Cr1l|12946|complement component (3b/4b) receptor 1-like	BC028945|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK134226|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr13_-_102453449_102453477	4.12785	FOXQ1.p2	AK138868|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK049798|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr16_+_44820840_44820850	4.04724	FOXQ1.p2	AY230200|Cd200r4|239849|CD200 receptor 4	NM_207244|Cd200r4|239849|CD200 receptor 4	BC131946|Cd200r4|239849|CD200 receptor 4	BC131972|Cd200r4|239849|CD200 receptor 4
mm9_v1_chr15_+_102289600_102289666	4.01874	FOXQ1.p2	NM_001170911|Prr13|66151|proline rich 13	NM_025385|Prr13|66151|proline rich 13	AK003850|Prr13|66151|proline rich 13	AK002430|Prr13|66151|proline rich 13	AK008894|Prr13|66151|proline rich 13	AK154583|Prr13|66151|proline rich 13	BC016234|Prr13|66151|proline rich 13	AK181585|Prr13|66151|proline rich 13
mm9_v1_chr6_+_38868942_38869113	4.01873	FOXQ1.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chr7_+_104599843_104599843	4.01518	FOXQ1.p2	NM_001136235|Kctd14|233529|potassium channel tetramerisation domain containing 14
mm9_v1_chr14_-_64035873_64036023	4.014	FOXQ1.p2	BC030668|Blk|12143|B lymphoid kinase	M30903|Blk|12143|B lymphoid kinase	AK171640|Blk|12143|B lymphoid kinase	AK089888|Blk|12143|B lymphoid kinase	NM_007549|Blk|12143|B lymphoid kinase
mm9_v1_chr10_-_18731766_18731781	3.95686	FOXQ1.p2	AK171326|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK172529|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	NM_001166402|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3
mm9_v1_chr11_+_67051530_67051557	3.93816	FOXQ1.p2	NM_010855|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066419|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ233297|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle
mm9_v1_chr9_-_110959315_110959476	3.89673	FOXQ1.p2	AJ318863|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AF316576|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr6_+_129528268_129528303	3.83665	FOXQ1.p2	BC145177|Klre1|243655|killer cell lectin-like receptor family E member 1	AF306663|Klre1|243655|killer cell lectin-like receptor family E member 1	NM_153590|Klre1|243655|killer cell lectin-like receptor family E member 1
mm9_v1_chr11_+_83476085_83476138	3.82014	FOXQ1.p2	NM_013652|Ccl4|20303|chemokine (C-C motif) ligand 4	AK089326|Ccl4|20303|chemokine (C-C motif) ligand 4	AK154685|Ccl4|20303|chemokine (C-C motif) ligand 4	AK155053|Ccl4|20303|chemokine (C-C motif) ligand 4	M23503|Ccl4|20303|chemokine (C-C motif) ligand 4	AK156948|Ccl4|20303|chemokine (C-C motif) ligand 4	AK172472|Ccl4|20303|chemokine (C-C motif) ligand 4	M35590|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128218|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128219|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119257|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119259|Ccl4|20303|chemokine (C-C motif) ligand 4
mm9_v1_chr15_-_9459612_9459630	3.81576	FOXQ1.p2	AK040364|Il7r|16197|interleukin 7 receptor	AK040740|Il7r|16197|interleukin 7 receptor	NM_008372|Il7r|16197|interleukin 7 receptor
mm9_v1_chr17_+_34400152_34400289	3.77697	FOXQ1.p2	NM_207105|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK077436|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC008168|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK170370|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171211|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK155573|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171281|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK172409|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK156899|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171005|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171290|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AK171298|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC010322|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	BC057998|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M15848|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065913|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119251|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF119252|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AY452202|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13537|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13538|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13539|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13540|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M66213|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	AF065912|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1	M13541|H2-Ab1|14961|histocompatibility 2, class II antigen A, beta 1
mm9_v1_chr12_-_115170216_115170645	3.77571	FOXQ1.p2	BC092269|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr1_-_66981900_66981939	3.7422	FOXQ1.p2	BC059087|Myl1|17901|myosin, light polypeptide 1	AK009938|Myl1|17901|myosin, light polypeptide 1	NM_001113387|Myl1|17901|myosin, light polypeptide 1
mm9_v1_chr6_-_129422702_129422806	3.74181	FOXQ1.p2	AY534909|Clec7a|56644|C-type lectin domain family 7, member a	BC027742|Clec7a|56644|C-type lectin domain family 7, member a	AF262985|Clec7a|56644|C-type lectin domain family 7, member a	NM_020008|Clec7a|56644|C-type lectin domain family 7, member a
mm9_v1_chr6_-_136806041_136806120	3.72376	FOXQ1.p2	BC046306|Art4|109978|ADP-ribosyltransferase 4	AK004744|Art4|109978|ADP-ribosyltransferase 4	AK019467|Art4|109978|ADP-ribosyltransferase 4	NM_026639|Art4|109978|ADP-ribosyltransferase 4
mm9_v1_chr2_-_60589953_60589966	3.71464	FOXQ1.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr11_-_79337178_79337240	3.7041	FOXQ1.p2	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr6_-_124586102_124586102	3.69211	FOXQ1.p2	AF459020|Gm5077|317677|predicted gene 5077	NM_173864|Gm5077|317677|predicted gene 5077
mm9_v1_chr4_-_44053229_44053254	3.66528	FOXQ1.p2	AK033507|Gne|50798|glucosamine	AK202067|Gne|50798|glucosamine
mm9_v1_chr1_+_87546558_87546676	3.66025	FOXQ1.p2	AK042095|Sp100|20684|nuclear antigen Sp100	AK080004|Sp100|20684|nuclear antigen Sp100	AK152348|Sp100|20684|nuclear antigen Sp100	U83630|Sp100|20684|nuclear antigen Sp100	AK146054|Sp100|20684|nuclear antigen Sp100	AK153487|Sp100|20684|nuclear antigen Sp100	BC069183|Sp100|20684|nuclear antigen Sp100	AK083304|Sp100|20684|nuclear antigen Sp100	NM_013673|Sp100|20684|nuclear antigen Sp100	CT010199|Sp100|20684|nuclear antigen Sp100	U83636|Sp100|20684|nuclear antigen Sp100
mm9_v1_chr3_+_51299646_51299685	3.64299	FOXQ1.p2	
mm9_v1_chr10_+_88348725_88348907	3.62587	FOXQ1.p2	AK136457|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	AY484428|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	NM_145423|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	BC017691|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8	AK039927|Slc5a8|216225|solute carrier family 5 (iodide transporter), member 8
mm9_v1_chr17_-_40379205_40379215	3.60026	FOXQ1.p2	BC132536|Crisp3|11572|cysteine-rich secretory protein 3	BC132538|Crisp3|11572|cysteine-rich secretory protein 3	L05560|Crisp3|11572|cysteine-rich secretory protein 3	NM_009639|Crisp3|11572|cysteine-rich secretory protein 3	BC114345|Crisp3|11572|cysteine-rich secretory protein 3	M92850|Crisp3|11572|cysteine-rich secretory protein 3	BC022573|Crisp3|11572|cysteine-rich secretory protein 3
mm9_v1_chr1_-_146622545_146622564	3.57444	FOXQ1.p2	BC099387|Rgs18|64214|regulator of G-protein signaling 18	AK036407|Rgs18|64214|regulator of G-protein signaling 18	BC132544|Rgs18|64214|regulator of G-protein signaling 18	BC132546|Rgs18|64214|regulator of G-protein signaling 18	NM_022881|Rgs18|64214|regulator of G-protein signaling 18	AB042807|Rgs18|64214|regulator of G-protein signaling 18	AF302685|Rgs18|64214|regulator of G-protein signaling 18
mm9_v1_chr15_-_5058532_5058532	3.5666	FOXQ1.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr1_-_146024404_146024501	3.55522	FOXQ1.p2	AF498319|Rgs13|246709|regulator of G-protein signaling 13	BC049624|Rgs13|246709|regulator of G-protein signaling 13	AK043268|Rgs13|246709|regulator of G-protein signaling 13	NM_153171|Rgs13|246709|regulator of G-protein signaling 13
mm9_v1_chr6_+_70165393_70165411	3.54572	FOXQ1.p2	X05877|LOC672450|672450|V(kappa) gene product	V00810|Igk-V28|16114|immunoglobulin kappa chain variable 28 (V28)	BC091754|Igkv6-23|637227|immunoglobulin kappa variable 6-23
mm9_v1_chr1_+_109407998_109408121	3.52029	FOXQ1.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chr10_+_96945972_96946140	3.48723	FOXQ1.p2	BC060126|Dcn|13179|decorin	Y11757|Dcn|13179|decorin
mm9_v1_chr10_-_28706096_28706111	3.46454	FOXQ1.p2	BC021783|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	BC055432|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK075881|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009183|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK008407|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009278|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009369|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009472|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009516|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009574|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009594|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009610|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009872|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009911|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009921|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK009961|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010028|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010108|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010978|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010037|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	AK010222|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene	NM_026336|2310057J18Rik|67719|RIKEN cDNA 2310057J18 gene
mm9_v1_chr9_+_5308846_5308883	3.46231	FOXQ1.p2	AK078836|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK138730|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK151547|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	BC061255|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	NM_007609|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK156667|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK160328|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK171877|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	U59463|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	Y13089|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase
mm9_v1_chr9_+_15309938_15309938	3.38663	FOXQ1.p2	AF197136|BC017612|170748|cDNA sequence BC017612	NM_133214|BC017612|170748|cDNA sequence BC017612
mm9_v1_chr7_+_27904968_27904975	3.38529	FOXQ1.p2	NM_007817|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr2_-_59963796_59963833	3.37344	FOXQ1.p2	NM_001001182|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK147737|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr6_-_130183339_130183339	3.34096	FOXQ1.p2	NM_001110323|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10093|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10095|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chr18_+_20469364_20469373	3.32635	FOXQ1.p2	BC154410|Dsg1a|13510|desmoglein 1 alpha	NM_010079|Dsg1a|13510|desmoglein 1 alpha
mm9_v1_chr2_-_44965866_44965983	3.30226	FOXQ1.p2	AK122312|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535781|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535783|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr17_+_47641999_47642189	3.27091	FOXQ1.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr1_+_7162595_7162622	3.26824	FOXQ1.p2	AK018402|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr2_+_112106470_112106612	3.25649	FOXQ1.p2	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr2_+_110561733_110561771	3.23391	FOXQ1.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr5_-_98459943_98460087	3.23259	FOXQ1.p2	BC076595|Antxr2|71914|anthrax toxin receptor 2	NM_133738|Antxr2|71914|anthrax toxin receptor 2	AK155460|Antxr2|71914|anthrax toxin receptor 2
mm9_v1_chr9_+_45127182_45127182	3.226	FOXQ1.p2	BC085323|Tmprss13|214531|transmembrane protease, serine 13	NM_001013373|Tmprss13|214531|transmembrane protease, serine 13
mm9_v1_chr2_+_145648290_145648325	3.21427	FOXQ1.p2	AK151332|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr11_-_79343891_79344047	3.19905	FOXQ1.p2	AK171332|Evi2a|14017|ecotropic viral integration site 2a	AK044098|Evi2a|14017|ecotropic viral integration site 2a	AK162958|Evi2a|14017|ecotropic viral integration site 2a	AK171594|Evi2a|14017|ecotropic viral integration site 2a	AK160302|Evi2a|14017|ecotropic viral integration site 2a	M34896|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr7_+_27904997_27905027	3.17058	FOXQ1.p2	BC011089|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2	BC024742|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr4_+_94405963_94405990	3.13852	FOXQ1.p2	BC050824|Tek|21687|endothelial-specific receptor tyrosine kinase	D13738|Tek|21687|endothelial-specific receptor tyrosine kinase	NM_013690|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr17_-_51965912_51965912	3.12787	FOXQ1.p2	NM_001163631|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr1_+_109258889_109258923	3.12	FOXQ1.p2	AK009003|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	AK009855|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	NM_025867|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11	BC010313|Serpinb11|66957|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm9_v1_chr11_-_79344055_79344121	3.11676	FOXQ1.p2	AK046407|Evi2a|14017|ecotropic viral integration site 2a	BC038124|Evi2a|14017|ecotropic viral integration site 2a	AK170527|Evi2a|14017|ecotropic viral integration site 2a	AK005353|Evi2a|14017|ecotropic viral integration site 2a	NM_146023|Evi2b|216984|ecotropic viral integration site 2b	NM_001033711|Evi2a|14017|ecotropic viral integration site 2a	NM_010161|Evi2a|14017|ecotropic viral integration site 2a
mm9_v1_chr16_+_49913305_49913369	3.11577	FOXQ1.p2	AK050387|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr6_+_67966702_67966735	3.11149	FOXQ1.p2	
mm9_v1_chr5_-_88128419_88128445	3.10833	FOXQ1.p2	BC019114|Csn2|12991|casein beta	BC013332|Csn2|12991|casein beta	BC092098|Csn2|12991|casein beta	BC020356|Csn2|12991|casein beta	BC050270|Csn2|12991|casein beta	BC020383|Csn2|12991|casein beta	BC021153|Csn2|12991|casein beta	BC057671|Csn2|12991|casein beta	BC080709|Csn2|12991|casein beta	AK164792|Csn2|12991|casein beta	AK164793|Csn2|12991|casein beta	AK085729|Csn2|12991|casein beta	AK021324|Csn2|12991|casein beta	AK021328|Csn2|12991|casein beta	AK052803|Csn2|12991|casein beta	AK052805|Csn2|12991|casein beta	AK052822|Csn2|12991|casein beta	AK085678|Csn2|12991|casein beta	AK085694|Csn2|12991|casein beta	AK085698|Csn2|12991|casein beta	AK085756|Csn2|12991|casein beta	AK142616|Csn2|12991|casein beta	AK142620|Csn2|12991|casein beta	AK142631|Csn2|12991|casein beta	AK142635|Csn2|12991|casein beta	AK164747|Csn2|12991|casein beta	AK164761|Csn2|12991|casein beta	AK164791|Csn2|12991|casein beta	AK164794|Csn2|12991|casein beta	NM_009972|Csn2|12991|casein beta	X04490|Csn2|12991|casein beta
mm9_v1_chr7_+_27904981_27904993	3.10494	FOXQ1.p2	M77497|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr15_-_76853069_76853216	3.04608	FOXQ1.p2	AK137456|Mb|17189|myoglobin	NM_001164048|Mb|17189|myoglobin	NM_001164047|Mb|17189|myoglobin
mm9_v1_chr4_+_94406190_94406316	3.04419	FOXQ1.p2	X67553|Tek|21687|endothelial-specific receptor tyrosine kinase	X71426|Tek|21687|endothelial-specific receptor tyrosine kinase	S67051|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr10_-_83989221_83989289	3.03928	FOXQ1.p2	AK205593|Ckap4|216197|cytoskeleton-associated protein 4	AK212843|Ckap4|216197|cytoskeleton-associated protein 4	AK217343|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr13_+_118009379_118009441	3.03813	FOXQ1.p2	NM_010330|Emb|13723|embigin	AK138271|Emb|13723|embigin	AK079570|Emb|13723|embigin
mm9_v1_chr18_+_11815869_11816018	3.0248	FOXQ1.p2	AK163908|Rbbp8|225182|retinoblastoma binding protein 8	AK048254|Rbbp8|225182|retinoblastoma binding protein 8	AK077614|Rbbp8|225182|retinoblastoma binding protein 8	AK087007|Rbbp8|225182|retinoblastoma binding protein 8	AK037049|Rbbp8|225182|retinoblastoma binding protein 8	BC027367|Rbbp8|225182|retinoblastoma binding protein 8
mm9_v1_chrX_-_150130711_150130822	3.02382	FOXQ1.p2	AK046557|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK050097|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK046708|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	AK085035|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	BC064459|Kctd12b|207474|potassium channel tetramerisation domain containing 12b	NM_175429|Kctd12b|207474|potassium channel tetramerisation domain containing 12b
mm9_v1_chr1_-_196957694_196957780	3.00127	FOXQ1.p2	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr3_+_93324437_93324454	2.99517	FOXQ1.p2	BC021916|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)
mm9_v1_chr1_+_154622471_154622540	2.95184	FOXQ1.p2	
mm9_v1_chr11_-_106576464_106576537	2.94944	FOXQ1.p2	L06039|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr6_-_142271469_142271500	2.9358	FOXQ1.p2	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr8_+_90806890_90806890	2.93529	FOXQ1.p2	AK155646|Adcy7|11513|adenylate cyclase 7	NM_001109756|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr11_-_106576585_106576603	2.91832	FOXQ1.p2	NM_001032378|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	NM_008816|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr5_+_123093892_123094082	2.91573	FOXQ1.p2	AK144585|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038839|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038845|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_001038887|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	NM_011027|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK171132|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC062808|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC141120|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145211|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AK145050|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ009823|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489296|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	AJ489297|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128303|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7	BC128304|P2rx7|18439|purinergic receptor P2X, ligand-gated ion channel, 7
mm9_v1_chr6_-_113385745_113385755	2.91134	FOXQ1.p2	AK080133|Cidec|14311|cell death-inducing DFFA-like effector c	NM_178373|Cidec|14311|cell death-inducing DFFA-like effector c	M61737|Cidec|14311|cell death-inducing DFFA-like effector c
mm9_v1_chr5_-_65351226_65351309	2.90369	FOXQ1.p2	AK137502|Tlr6|21899|toll-like receptor 6	NM_011604|Tlr6|21899|toll-like receptor 6	BC055366|Tlr6|21899|toll-like receptor 6	AK154253|Tlr6|21899|toll-like receptor 6
mm9_v1_chr10_-_117252126_117252166	2.89364	FOXQ1.p2	
mm9_v1_chr3_-_20022409_20022533	2.8936	FOXQ1.p2	AK207016|Gyg|27357|glycogenin	AK206608|Gyg|27357|glycogenin	AK190314|Gyg|27357|glycogenin	AK210267|Gyg|27357|glycogenin
mm9_v1_chr11_-_106576380_106576409	2.89284	FOXQ1.p2	BC085502|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr3_-_58934492_58934545	2.88778	FOXQ1.p2	BC028995|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK164982|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK140301|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AF177211|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	BC058558|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_001008497|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_133200|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14
mm9_v1_chr6_+_70321430_70321482	2.8812	FOXQ1.p2	
mm9_v1_chr16_+_48872756_48872760	2.88052	FOXQ1.p2	AJ536019|Retnlg|245195|resistin like gamma	AK158401|Retnlg|245195|resistin like gamma
mm9_v1_chr11_-_62206116_62206160	2.86231	FOXQ1.p2	AK137695|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr14_+_27813547_27813547	2.86085	FOXQ1.p2	NM_010420|Hesx1|15209|homeobox gene expressed in ES cells	U40720|Hesx1|15209|homeobox gene expressed in ES cells
mm9_v1_chr4_-_108790523_108790574	2.85701	FOXQ1.p2	BC026927|Osbpl9|100273|oxysterol binding protein-like 9
mm9_v1_chr19_-_41289262_41289457	2.84141	FOXQ1.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr16_+_49868005_49868080	2.83993	FOXQ1.p2	BC009094|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr1_-_164816645_164816658	2.83851	FOXQ1.p2	AK129026|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr6_-_115712483_115712483	2.83637	FOXQ1.p2	NM_001168256|Tmem40|94346|transmembrane protein 40	NM_001168257|Tmem40|94346|transmembrane protein 40
mm9_v1_chr1_+_173612132_173612157	2.82353	FOXQ1.p2	AK146173|Cd48|12506|CD48 antigen	AK088027|Cd48|12506|CD48 antigen	AK084984|Cd48|12506|CD48 antigen	BC060977|Cd48|12506|CD48 antigen
mm9_v1_chr4_-_118862555_118862615	2.80675	FOXQ1.p2	BC063257|Ermap|27028|erythroblast membrane-associated protein	AF153906|Ermap|27028|erythroblast membrane-associated protein	AK036702|Ermap|27028|erythroblast membrane-associated protein	AK158114|Ermap|27028|erythroblast membrane-associated protein	AK137510|Ermap|27028|erythroblast membrane-associated protein	NM_013848|Ermap|27028|erythroblast membrane-associated protein
mm9_v1_chr3_+_93324411_93324431	2.79172	FOXQ1.p2	AK164352|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	NM_016740|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	AK002490|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	AK003889|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)	BC086903|S100a11|20195|S100 calcium binding protein A11 (calgizzarin)
mm9_v1_chr19_+_12535268_12535270	2.79168	FOXQ1.p2	AK030216|Mpeg1|17476|macrophage expressed gene 1	NM_010821|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr6_-_122799694_122799778	2.78785	FOXQ1.p2	AK081010|C3ar1|12267|complement component 3a receptor 1
mm9_v1_chr5_+_148242018_148242155	2.75105	FOXQ1.p2	NM_028291|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr9_+_7272513_7272544	2.74888	FOXQ1.p2	BC125320|Mmp13|17386|matrix metallopeptidase 13	BC125322|Mmp13|17386|matrix metallopeptidase 13	NM_008607|Mmp13|17386|matrix metallopeptidase 13	AK150728|Mmp13|17386|matrix metallopeptidase 13	AK151626|Mmp13|17386|matrix metallopeptidase 13	AK152916|Mmp13|17386|matrix metallopeptidase 13	AK153458|Mmp13|17386|matrix metallopeptidase 13	AK155188|Mmp13|17386|matrix metallopeptidase 13	AK152507|Mmp13|17386|matrix metallopeptidase 13	AK159921|Mmp13|17386|matrix metallopeptidase 13	AK160819|Mmp13|17386|matrix metallopeptidase 13	X66473|Mmp13|17386|matrix metallopeptidase 13
mm9_v1_chr2_-_66512442_66512445	2.74533	FOXQ1.p2	AK004093|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr3_+_67406958_67407063	2.72996	FOXQ1.p2	AK171855|Mfsd1|66868|major facilitator superfamily domain containing 1
mm9_v1_chr11_-_46202942_46203016	2.72319	FOXQ1.p2	BC128374|Itk|16428|IL2-inducible T-cell kinase	BC128375|Itk|16428|IL2-inducible T-cell kinase	D14042|Itk|16428|IL2-inducible T-cell kinase	BC028478|Itk|16428|IL2-inducible T-cell kinase	AK020772|Itk|16428|IL2-inducible T-cell kinase	AK079693|Itk|16428|IL2-inducible T-cell kinase	AK153613|Itk|16428|IL2-inducible T-cell kinase	AK153692|Itk|16428|IL2-inducible T-cell kinase	L05631|Itk|16428|IL2-inducible T-cell kinase	L10628|Itk|16428|IL2-inducible T-cell kinase	AK083380|Itk|16428|IL2-inducible T-cell kinase	L00619|Itk|16428|IL2-inducible T-cell kinase	NM_010583|Itk|16428|IL2-inducible T-cell kinase
mm9_v1_chr2_-_119916315_119916503	2.70945	FOXQ1.p2	AK008769|Ehd4|98878|EH-domain containing 4	AK076544|Ehd4|98878|EH-domain containing 4
mm9_v1_chr17_-_34960292_34960410	2.68532	FOXQ1.p2	M12384|C4a|625018|complement component 4A (Rodgers blood group)	BC141050|C4a|625018|complement component 4A (Rodgers blood group)	M21576|C4a|625018|complement component 4A (Rodgers blood group)	NM_011413|C4a|625018|complement component 4A (Rodgers blood group)	AK129017|C4a|625018|complement component 4A (Rodgers blood group)
mm9_v1_chr8_+_131028275_131028322	2.68406	FOXQ1.p2	AK002673|Nrp1|18186|neuropilin 1
mm9_v1_chr19_-_20802015_20802054	2.67876	FOXQ1.p2	BC046315|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC032880|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139412|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	BC139413|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	NM_011921|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7	U96401|Aldh1a7|26358|aldehyde dehydrogenase family 1, subfamily A7
mm9_v1_chr6_-_3349470_3349570	2.67507	FOXQ1.p2	BC079894|Samd9l|209086|sterile alpha motif domain containing 9-like	AK052535|Samd9l|209086|sterile alpha motif domain containing 9-like	NM_010156|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr11_-_106576550_106576578	2.66556	FOXQ1.p2	AK084527|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	AK169431|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	BC008519|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr17_-_40456121_40456155	2.65292	FOXQ1.p2	M92849|Crisp1|11571|cysteine-rich secretory protein 1	L05559|Crisp1|11571|cysteine-rich secretory protein 1	BC011150|Crisp1|11571|cysteine-rich secretory protein 1	AK009449|Crisp1|11571|cysteine-rich secretory protein 1	NM_009638|Crisp1|11571|cysteine-rich secretory protein 1
mm9_v1_chr16_+_43640198_43640217	2.65008	FOXQ1.p2	AK080813|Zbtb20|56490|zinc finger and BTB domain containing 20
mm9_v1_chr17_+_35331446_35331471	2.63224	FOXQ1.p2	NM_008518|Ltb|16994|lymphotoxin B	U16985|Ltb|16994|lymphotoxin B	BC064062|Ltb|16994|lymphotoxin B	BC114919|Ltb|16994|lymphotoxin B
mm9_v1_chr4_+_66488753_66488865	2.62272	FOXQ1.p2	AK154297|Tlr4|21898|toll-like receptor 4	AK170566|Tlr4|21898|toll-like receptor 4	AF110133|Tlr4|21898|toll-like receptor 4	NM_021297|Tlr4|21898|toll-like receptor 4	AF185285|Tlr4|21898|toll-like receptor 4
mm9_v1_chr2_+_60047917_60048030	2.59449	FOXQ1.p2	AK034109|March7|57438|membrane-associated ring finger (C3HC4) 7	AK143177|March7|57438|membrane-associated ring finger (C3HC4) 7	AK166666|March7|57438|membrane-associated ring finger (C3HC4) 7	AK168555|March7|57438|membrane-associated ring finger (C3HC4) 7	AF155739|March7|57438|membrane-associated ring finger (C3HC4) 7	NM_020575|March7|57438|membrane-associated ring finger (C3HC4) 7	AK167246|March7|57438|membrane-associated ring finger (C3HC4) 7
mm9_v1_chr2_-_59963586_59963753	2.58064	FOXQ1.p2	BC150814|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK029386|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK134250|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK173180|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B	AK030867|Baz2b|407823|bromodomain adjacent to zinc finger domain, 2B
mm9_v1_chr18_+_56559977_56560028	2.57473	FOXQ1.p2	AK018551|Gramd3|107022|GRAM domain containing 3	BC057978|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr1_+_173612173_173612224	2.56826	FOXQ1.p2	X17501|Cd48|12506|CD48 antigen	X53526|Cd48|12506|CD48 antigen	AK007741|Cd48|12506|CD48 antigen	NM_007649|Cd48|12506|CD48 antigen	AK151601|Cd48|12506|CD48 antigen	AB196820|Cd48|12506|CD48 antigen	AB196821|Cd48|12506|CD48 antigen	AB196822|Cd48|12506|CD48 antigen	AB196823|Cd48|12506|CD48 antigen
mm9_v1_chr2_-_37225800_37225813	2.565	FOXQ1.p2	AK046886|Rc3h2|319817|ring finger and CCCH-type zinc finger domains 2
mm9_v1_chr3_+_132772586_132772695	2.5646	FOXQ1.p2	AK015941|Ints12|71793|integrator complex subunit 12
mm9_v1_chr1_+_24685475_24685527	2.56401	FOXQ1.p2	BC027774|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr1_-_45559904_45559916	2.56178	FOXQ1.p2	AK147220|Col5a2|12832|collagen, type V, alpha 2	AK080811|Col5a2|12832|collagen, type V, alpha 2	AK084285|Col5a2|12832|collagen, type V, alpha 2	AK132413|Col5a2|12832|collagen, type V, alpha 2	AK151929|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr13_-_67552515_67552559	2.53957	FOXQ1.p2	BC080824|Zfp874a|238692|zinc finger protein 874a	AK136394|Zfp874a|238692|zinc finger protein 874a	AK049183|Zfp874a|238692|zinc finger protein 874a	AK145787|Zfp874a|238692|zinc finger protein 874a	NM_177712|Zfp874a|238692|zinc finger protein 874a
mm9_v1_chr6_+_34813131_34813171	2.53072	FOXQ1.p2	AK030532|Tmem140|68487|transmembrane protein 140	AK165621|Tmem140|68487|transmembrane protein 140	NM_197986|Tmem140|68487|transmembrane protein 140	BC023802|Tmem140|68487|transmembrane protein 140
mm9_v1_chr15_+_103284200_103284376	2.51299	FOXQ1.p2	AK040192|Nckap1l|105855|NCK associated protein 1 like	NM_153505|Nckap1l|105855|NCK associated protein 1 like	AK149862|Nckap1l|105855|NCK associated protein 1 like	AK083390|Nckap1l|105855|NCK associated protein 1 like	BC037096|Nckap1l|105855|NCK associated protein 1 like	AK134039|Nckap1l|105855|NCK associated protein 1 like	BC030040|Nckap1l|105855|NCK associated protein 1 like	BC007186|Nckap1l|105855|NCK associated protein 1 like
mm9_v1_chr10_+_39332739_39332739	2.51264	FOXQ1.p2	AK052190|Traf3ip2|103213|TRAF3 interacting protein 2	NM_134000|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr14_+_21520038_21520084	2.51011	FOXQ1.p2	
mm9_v1_chr7_+_149646716_149646734	2.50981	FOXQ1.p2	D49691|Lsp1|16985|lymphocyte specific 1
mm9_v1_chr7_+_87331726_87331785	2.50203	FOXQ1.p2	AK145570|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B	NM_013659|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B	AK028896|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B	AK173249|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm9_v1_chr2_-_181316671_181316722	2.4619	FOXQ1.p2	BC016535|Uckl1|68556|uridine-cytidine kinase 1-like 1	NM_026765|Uckl1|68556|uridine-cytidine kinase 1-like 1	AK144803|Uckl1|68556|uridine-cytidine kinase 1-like 1
mm9_v1_chr11_+_20125239_20125296	2.45593	FOXQ1.p2	AK078671|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr11_+_101192080_101192099	2.44441	FOXQ1.p2	BC080857|Aoc3|11754|amine oxidase, copper containing 3	AF115411|Aoc3|11754|amine oxidase, copper containing 3
mm9_v1_chr19_-_11410534_11410635	2.4281	FOXQ1.p2	AK085297|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC019784|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	BC024402|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AF237917|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_027836|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK149890|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK018686|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK151261|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK152098|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	NM_001025610|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7	AK046559|Ms4a7|109225|membrane-spanning 4-domains, subfamily A, member 7
mm9_v1_chr3_-_10208575_10208582	2.42479	FOXQ1.p2	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr19_-_32061015_32061042	2.42078	FOXQ1.p2	AK135485|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr19_+_11592938_11593140	2.41704	FOXQ1.p2	AF237909|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	NM_027209|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK172345|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	BC027425|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK075671|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK007613|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B
mm9_v1_chr19_-_43749304_43749360	2.40894	FOXQ1.p2	AK155044|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr7_+_149646740_149646803	2.40744	FOXQ1.p2	BC044736|Lsp1|16985|lymphocyte specific 1	AK003081|Lsp1|16985|lymphocyte specific 1	M89956|Lsp1|16985|lymphocyte specific 1	NM_001136071|Lsp1|16985|lymphocyte specific 1	S74179|Lsp1|16985|lymphocyte specific 1
mm9_v1_chr19_-_43749067_43749205	2.40521	FOXQ1.p2	AF377993|Slc25a28|246696|solute carrier family 25, member 28	AF377994|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr4_-_136454674_136454768	2.3872	FOXQ1.p2	X58861|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159343|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK002655|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK136737|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK150771|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	AK159210|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	BC002086|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide	NM_007572|C1qa|12259|complement component 1, q subcomponent, alpha polypeptide
mm9_v1_chr4_-_15872497_15872653	2.38629	FOXQ1.p2	CT010405|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK010473|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK004725|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK168490|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK015692|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK146003|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	AK002756|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	BC046972|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial	NM_026172|Decr1|67460|2,4-dienoyl CoA reductase 1, mitochondrial
mm9_v1_chr1_+_132762248_132762329	2.37427	FOXQ1.p2	BC116674|Faim3|69169|Fas apoptotic inhibitory molecule 3	BC118505|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr9_-_20933055_20933154	2.3704	FOXQ1.p2	BC053021|Tyk2|54721|tyrosine kinase 2	BC094240|Tyk2|54721|tyrosine kinase 2
mm9_v1_chr11_-_3831963_3832085	2.36779	FOXQ1.p2	AK143761|Tcn2|21452|transcobalamin 2	NM_001130459|Tcn2|21452|transcobalamin 2	AK161618|Tcn2|21452|transcobalamin 2	AK147176|Tcn2|21452|transcobalamin 2	AK133707|Tcn2|21452|transcobalamin 2	NM_015749|Tcn2|21452|transcobalamin 2	AK170401|Tcn2|21452|transcobalamin 2	NM_001130458|Tcn2|21452|transcobalamin 2
mm9_v1_chr3_+_105916283_105916305	2.35584	FOXQ1.p2	AK007573|Chia|81600|chitinase, acidic	AK008633|Chia|81600|chitinase, acidic	AK008650|Chia|81600|chitinase, acidic	AK008757|Chia|81600|chitinase, acidic	AK160173|Chia|81600|chitinase, acidic	BC034548|Chia|81600|chitinase, acidic	NM_023186|Chia|81600|chitinase, acidic	AF290003|Chia|81600|chitinase, acidic	DQ349202|Chia|81600|chitinase, acidic	EF094027|Chia|81600|chitinase, acidic	BC011134|Chia|81600|chitinase, acidic	AF154571|Chia|81600|chitinase, acidic
mm9_v1_chr4_+_134481298_134481299	2.34766	FOXQ1.p2	
mm9_v1_chr3_+_135488617_135488753	2.34243	FOXQ1.p2	AK085740|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135149|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135150|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr1_-_164828842_164828859	2.31657	FOXQ1.p2	BC031415|Fmo2|55990|flavin containing monooxygenase 2	NM_018881|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr1_+_24258538_24258666	2.30526	FOXQ1.p2	AK017395|Col9a1|12839|collagen, type IX, alpha 1
mm9_v1_chr12_+_99506844_99506881	2.29414	FOXQ1.p2	AK134113|Gpr65|14744|G-protein coupled receptor 65	NM_008152|Gpr65|14744|G-protein coupled receptor 65	U39827|Gpr65|14744|G-protein coupled receptor 65	AK142853|Gpr65|14744|G-protein coupled receptor 65
mm9_v1_chr19_-_43749362_43749370	2.29316	FOXQ1.p2	BC025908|Slc25a28|246696|solute carrier family 25, member 28	NM_145156|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr17_-_51951378_51951378	2.29139	FOXQ1.p2	AK158518|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163630|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr15_-_99609024_99609168	2.29124	FOXQ1.p2	AK181177|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr17_+_75784448_75784497	2.27532	FOXQ1.p2	AK080024|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr4_-_48217142_48217157	2.2674	FOXQ1.p2	AK214712|Erp44|76299|endoplasmic reticulum protein 44	AK206483|Erp44|76299|endoplasmic reticulum protein 44
mm9_v1_chr18_+_70085202_70085238	2.26457	FOXQ1.p2	AK078964|Ccdc68|381175|coiled-coil domain containing 68	NM_201362|Ccdc68|381175|coiled-coil domain containing 68	BC046343|Ccdc68|381175|coiled-coil domain containing 68
mm9_v1_chr4_+_8533630_8533662	2.26424	FOXQ1.p2	AK213817|Rab2a|59021|RAB2A, member RAS oncogene family	AK218701|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr15_-_102019373_102019395	2.24277	FOXQ1.p2	AY033912|Csad|246277|cysteine sulfinic acid decarboxylase	AK186014|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr10_-_61970481_61970509	2.24219	FOXQ1.p2	BC037076|Srgn|19073|serglycin	J04549|Srgn|19073|serglycin	AK157945|Srgn|19073|serglycin	M34603|Srgn|19073|serglycin	NM_011157|Srgn|19073|serglycin	X16133|Srgn|19073|serglycin	AK168124|Srgn|19073|serglycin	AK151357|Srgn|19073|serglycin
mm9_v1_chr10_+_41607235_41607307	2.23975	FOXQ1.p2	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chr7_+_120909625_120909653	2.23919	FOXQ1.p2	BC020531|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr3_+_87975676_87975677	2.22553	FOXQ1.p2	
mm9_v1_chr7_+_130337876_130337891	2.21922	FOXQ1.p2	AK014218|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr18_-_70301202_70301243	2.21907	FOXQ1.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr15_+_102111950_102112098	2.21552	FOXQ1.p2	AK178367|Mfsd5|106073|major facilitator superfamily domain containing 5
mm9_v1_chr11_+_28821585_28821724	2.19881	FOXQ1.p2	AK162532|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chrX_-_130696466_130696502	2.19485	FOXQ1.p2	AY534249|Xkrx|331524|X Kell blood group precursor related X linked	NM_183319|Xkrx|331524|X Kell blood group precursor related X linked	BC150896|Xkrx|331524|X Kell blood group precursor related X linked	BC150897|Xkrx|331524|X Kell blood group precursor related X linked
mm9_v1_chr1_-_45559866_45559893	2.1889	FOXQ1.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr3_-_10208480_10208567	2.17587	FOXQ1.p2	M28726|Fabp4|11770|fatty acid binding protein 4, adipocyte	U96149|Fabp9|21884|fatty acid binding protein 9, testis	CT010390|Fabp4|11770|fatty acid binding protein 4, adipocyte	K02109|Fabp4|11770|fatty acid binding protein 4, adipocyte	BC018558|Fabp4|11770|fatty acid binding protein 4, adipocyte	BC054426|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr19_+_12535536_12535672	2.17425	FOXQ1.p2	L20315|Mpeg1|17476|macrophage expressed gene 1	BC129843|Mpeg1|17476|macrophage expressed gene 1	BC129844|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr11_+_67051128_67051361	2.16987	FOXQ1.p2	DQ066415|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066416|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066417|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AK138608|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AY963801|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066418|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle
mm9_v1_chr8_-_42127124_42127219	2.16	FOXQ1.p2	AF173380|Mtus1|102103|mitochondrial tumor suppressor 1	AF493235|Mtus1|102103|mitochondrial tumor suppressor 1	AK031693|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr1_-_182160174_182160194	2.15702	FOXQ1.p2	U57325|Psen2|19165|presenilin 2
mm9_v1_chr6_-_92851434_92851434	2.15423	FOXQ1.p2	NM_175314|Adamts9|101401|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
mm9_v1_chr14_-_56721304_56721410	2.14512	FOXQ1.p2	BC125511|Ctsg|13035|cathepsin G	BC125513|Ctsg|13035|cathepsin G	NM_007800|Ctsg|13035|cathepsin G	X78544|Ctsg|13035|cathepsin G
mm9_v1_chr8_-_8666771_8666782	2.13322	FOXQ1.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chrX_+_83115611_83115703	2.12719	FOXQ1.p2	NM_001163539|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK155591|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene	AK154689|5430427O19Rik|71398|RIKEN cDNA 5430427O19 gene
mm9_v1_chr14_+_69984344_69984396	2.11671	FOXQ1.p2	AK195341|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK213430|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK218892|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4	AK202804|Entpd4|67464|ectonucleoside triphosphate diphosphohydrolase 4
mm9_v1_chr13_-_4149873_4149891	2.11435	FOXQ1.p2	BC034259|Akr1c18|105349|aldo-keto reductase family 1, member C18	AB059565|Akr1c18|105349|aldo-keto reductase family 1, member C18	NM_134066|Akr1c18|105349|aldo-keto reductase family 1, member C18	AK153898|Akr1c18|105349|aldo-keto reductase family 1, member C18
mm9_v1_chr17_-_36169573_36169660	2.11326	FOXQ1.p2	AF100699|H2-T23|15040|histocompatibility 2, T region locus 23	AF100700|H2-T23|15040|histocompatibility 2, T region locus 23	AF100702|H2-T23|15040|histocompatibility 2, T region locus 23	AF057279|H2-T23|15040|histocompatibility 2, T region locus 23	AF082510|H2-T23|15040|histocompatibility 2, T region locus 23	BC099472|H2-T23|15040|histocompatibility 2, T region locus 23	AB359230|H2-T23|15040|histocompatibility 2, T region locus 23	AK133502|H2-T23|15040|histocompatibility 2, T region locus 23	M11284|H2-T23|15040|histocompatibility 2, T region locus 23	NM_010398|H2-T23|15040|histocompatibility 2, T region locus 23
mm9_v1_chr4_-_108790578_108790640	2.11321	FOXQ1.p2	BC089163|Osbpl9|100273|oxysterol binding protein-like 9	AK035658|Osbpl9|100273|oxysterol binding protein-like 9	AK172010|Osbpl9|100273|oxysterol binding protein-like 9	NM_001134791|Osbpl9|100273|oxysterol binding protein-like 9	NM_173350|Osbpl9|100273|oxysterol binding protein-like 9
mm9_v1_chr15_-_3329691_3329763	2.10486	FOXQ1.p2	
mm9_v1_chrX_-_103163796_103163937	2.09476	FOXQ1.p2	BC023242|Magt1|67075|magnesium transporter 1
mm9_v1_chr1_+_132762353_132762436	2.075	FOXQ1.p2	AK007714|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK155943|Faim3|69169|Fas apoptotic inhibitory molecule 3	NM_026976|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK156523|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227385|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227386|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227387|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227388|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227389|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227390|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227391|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227392|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227393|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr19_-_56464434_56464529	2.07357	FOXQ1.p2	BC145109|Nrap|18175|nebulin-related anchoring protein	AK138925|Nrap|18175|nebulin-related anchoring protein	AY177622|Nrap|18175|nebulin-related anchoring protein	AY177623|Nrap|18175|nebulin-related anchoring protein	NM_008733|Nrap|18175|nebulin-related anchoring protein	NM_198059|Nrap|18175|nebulin-related anchoring protein
mm9_v1_chr9_-_71011053_71011095	2.07035	FOXQ1.p2	BC024105|Aqp9|64008|aquaporin 9	AK050042|Aqp9|64008|aquaporin 9	NM_022026|Aqp9|64008|aquaporin 9
mm9_v1_chrX_+_103338609_103338616	2.06754	FOXQ1.p2	AK170044|Tlr13|279572|toll-like receptor 13	AY510706|Tlr13|279572|toll-like receptor 13	NM_205820|Tlr13|279572|toll-like receptor 13
mm9_v1_chr1_-_141982814_141983012	2.04924	FOXQ1.p2	AK075670|Cfh|12628|complement component factor h	M31980|Cfh|12628|complement component factor h
mm9_v1_chr7_+_138712015_138712162	2.03456	FOXQ1.p2	AK039977|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK079742|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chrX_-_9046362_9046456	2.01562	FOXQ1.p2	U43384|Cybb|13058|cytochrome b-245, beta polypeptide	AK033570|Cybb|13058|cytochrome b-245, beta polypeptide	AK053920|Cybb|13058|cytochrome b-245, beta polypeptide	AK079926|Cybb|13058|cytochrome b-245, beta polypeptide	BC071229|Cybb|13058|cytochrome b-245, beta polypeptide	BC042838|Cybb|13058|cytochrome b-245, beta polypeptide	AK152257|Cybb|13058|cytochrome b-245, beta polypeptide	AK153154|Cybb|13058|cytochrome b-245, beta polypeptide	AK153259|Cybb|13058|cytochrome b-245, beta polypeptide	AK171526|Cybb|13058|cytochrome b-245, beta polypeptide	FJ168469|Cybb|13058|cytochrome b-245, beta polypeptide	AK154126|Cybb|13058|cytochrome b-245, beta polypeptide	NM_007807|Cybb|13058|cytochrome b-245, beta polypeptide
mm9_v1_chr14_-_49282546_49282546	2.01449	FOXQ1.p2	BC017609|Otx2|18424|orthodenticle homolog 2 (Drosophila)	NM_144841|Otx2|18424|orthodenticle homolog 2 (Drosophila)
mm9_v1_chr15_-_74942109_74942378	2.01413	FOXQ1.p2	M18466|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	D86232|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	BC092082|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2	NM_001099217|Ly6c2|100041546|lymphocyte antigen 6 complex, locus C2
mm9_v1_chr10_+_79326772_79326782	2.0134	FOXQ1.p2	AK205993|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr3_+_17954689_17954736	1.99053	FOXQ1.p2	AF218865|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr5_+_86500770_86500862	1.99005	FOXQ1.p2	AK162655|Stap1|56792|signal transducing adaptor family member 1	AK153661|Stap1|56792|signal transducing adaptor family member 1	BC057898|Stap1|56792|signal transducing adaptor family member 1	AK042475|Stap1|56792|signal transducing adaptor family member 1	BC145550|Stap1|56792|signal transducing adaptor family member 1	BC145828|Stap1|56792|signal transducing adaptor family member 1	BC145830|Stap1|56792|signal transducing adaptor family member 1	AK041474|Stap1|56792|signal transducing adaptor family member 1	NM_019992|Stap1|56792|signal transducing adaptor family member 1	AB036058|Stap1|56792|signal transducing adaptor family member 1
mm9_v1_chr1_-_182175890_182176045	1.98654	FOXQ1.p2	AF038935|Psen2|19165|presenilin 2	U57324|Psen2|19165|presenilin 2	NM_011183|Psen2|19165|presenilin 2
mm9_v1_chrX_-_9694712_9694834	1.97526	FOXQ1.p2	AB028049|Srpx|51795|sushi-repeat-containing protein	AB028050|Srpx|51795|sushi-repeat-containing protein	BC022572|Srpx|51795|sushi-repeat-containing protein	AK034696|Srpx|51795|sushi-repeat-containing protein	NM_016911|Srpx|51795|sushi-repeat-containing protein	BC027630|Srpx|51795|sushi-repeat-containing protein	AK159662|Srpx|51795|sushi-repeat-containing protein
mm9_v1_chr16_-_85455370_85455468	1.97245	FOXQ1.p2	
mm9_v1_chr12_-_32893074_32893513	1.96361	FOXQ1.p2	BC051246|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137620|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146201|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AJ249280|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_020272|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK137470|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK040543|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	AK132553|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide	NM_001146200|Pik3cg|30955|phosphoinositide-3-kinase, catalytic, gamma polypeptide
mm9_v1_chr3_-_122737855_122737904	1.96248	FOXQ1.p2	AK003634|Myoz2|59006|myozenin 2	AJ252148|Myoz2|59006|myozenin 2	BC024360|Myoz2|59006|myozenin 2	AY013296|Myoz2|59006|myozenin 2	AK085927|Myoz2|59006|myozenin 2	NM_021503|Myoz2|59006|myozenin 2
mm9_v1_chr3_-_113061599_113061616	1.95409	FOXQ1.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5
mm9_v1_chr11_+_95198329_95198359	1.95244	FOXQ1.p2	AK077747|Fam117a|215512|family with sequence similarity 117, memberA	AK143632|Fam117a|215512|family with sequence similarity 117, memberA	AK165378|Fam117a|215512|family with sequence similarity 117, memberA	AK167417|Fam117a|215512|family with sequence similarity 117, memberA	NM_172543|Fam117a|215512|family with sequence similarity 117, memberA	BC055690|Fam117a|215512|family with sequence similarity 117, memberA
mm9_v1_chr19_+_5877812_5877838	1.95201	FOXQ1.p2	AK133879|Slc25a45|107375|solute carrier family 25, member 45	AK155754|Slc25a45|107375|solute carrier family 25, member 45	AK169876|Slc25a45|107375|solute carrier family 25, member 45	AK170869|Slc25a45|107375|solute carrier family 25, member 45
mm9_v1_chr11_+_82988687_82988701	1.94088	FOXQ1.p2	BC044865|Slfn4|20558|schlafen 4	NM_011410|Slfn4|20558|schlafen 4	AK137559|Slfn4|20558|schlafen 4	AK137689|Slfn4|20558|schlafen 4
mm9_v1_chr11_+_67090625_67090855	1.93027	FOXQ1.p2	NM_177369|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021877|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021876|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	BC150737|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK029328|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK081482|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK087387|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AY963802|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021878|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal
mm9_v1_chr6_-_3349415_3349463	1.92482	FOXQ1.p2	AK172649|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr19_+_32694494_32694583	1.91513	FOXQ1.p2	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr6_-_129225348_129225390	1.91391	FOXQ1.p2	BC139135|Cd69|12515|CD69 antigen	BC139136|Cd69|12515|CD69 antigen	BC106997|Cd69|12515|CD69 antigen	BC128272|Cd69|12515|CD69 antigen	BC128273|Cd69|12515|CD69 antigen	AK017979|Cd69|12515|CD69 antigen	AK151076|Cd69|12515|CD69 antigen	AK153224|Cd69|12515|CD69 antigen	AK171645|Cd69|12515|CD69 antigen	NM_001033122|Cd69|12515|CD69 antigen
mm9_v1_chr5_+_102910569_102910573	1.89876	FOXQ1.p2	BC025502|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr2_+_112124767_112124844	1.89836	FOXQ1.p2	AF211855|Slc12a6|107723|solute carrier family 12, member 6	NM_133648|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr4_-_147183894_147183948	1.88651	FOXQ1.p2	NM_001127189|Gm13157|100041677|predicted gene 13157	AK011687|2610036A22Rik|70190|RIKEN cDNA 2610036A22 gene
mm9_v1_chr17_-_37712365_37712392	1.88595	FOXQ1.p2	NM_146289|Olfr113|258286|olfactory receptor 113	BC132178|Olfr113|258286|olfactory receptor 113	BC132180|Olfr113|258286|olfactory receptor 113
mm9_v1_chrX_+_7274259_7274353	1.88336	FOXQ1.p2	NM_173747|Gpkow|209416|G patch domain and KOW motifs	AK017864|Gpkow|209416|G patch domain and KOW motifs	AK144167|Gpkow|209416|G patch domain and KOW motifs	AK028433|Gpkow|209416|G patch domain and KOW motifs	BC092224|Gpkow|209416|G patch domain and KOW motifs
mm9_v1_chr1_+_45402907_45402949	1.86279	FOXQ1.p2	AK029451|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr10_+_79389816_79389883	1.85976	FOXQ1.p2	AK154956|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	NM_007880|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	BC050925|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)
mm9_v1_chr5_-_92777875_92777914	1.85928	FOXQ1.p2	AF227743|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M33266|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	NM_021274|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC030067|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC057150|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150380|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK156907|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK172540|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M86829|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK144279|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150765|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151210|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151248|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151415|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151534|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152568|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152814|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK153181|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157130|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157139|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157589|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157678|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK146144|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152234|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr12_+_105452740_105452842	1.84558	FOXQ1.p2	BC119537|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	AK149697|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK150157|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK156086|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	BC132647|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	BC132649|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	NM_001168294|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_001168295|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_009251|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	AK156462|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	BC049975|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK138954|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_001033335|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F
mm9_v1_chr8_-_3854285_3854307	1.84317	FOXQ1.p2	AF373412|Cd209e|170780|CD209e antigen	BC107188|Cd209e|170780|CD209e antigen	BC107189|Cd209e|170780|CD209e antigen	NM_130905|Cd209e|170780|CD209e antigen	AK040917|Cd209e|170780|CD209e antigen
mm9_v1_chr4_+_102262447_102262471	1.83901	FOXQ1.p2	AK051102|Pde4b|18578|phosphodiesterase 4B, cAMP specific	NM_001177981|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC071259|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr7_+_18398030_18398100	1.83859	FOXQ1.p2	AK005390|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005482|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005509|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005533|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	NM_025957|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	BC099412|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14
mm9_v1_chr6_-_52190771_52190869	1.82622	FOXQ1.p2	L08758|Hoxa10|15395|homeobox A10	NM_001122950|Hoxa10|15395|homeobox A10
mm9_v1_chr5_-_114280434_114280521	1.8261	FOXQ1.p2	AK089214|Selplg|20345|selectin, platelet (p-selectin) ligand	AK155762|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156933|Selplg|20345|selectin, platelet (p-selectin) ligand	AK158134|Selplg|20345|selectin, platelet (p-selectin) ligand	BC003874|Selplg|20345|selectin, platelet (p-selectin) ligand	AK172077|Selplg|20345|selectin, platelet (p-selectin) ligand	AK171693|Selplg|20345|selectin, platelet (p-selectin) ligand	AK156551|Selplg|20345|selectin, platelet (p-selectin) ligand	AK089188|Selplg|20345|selectin, platelet (p-selectin) ligand	NM_009151|Selplg|20345|selectin, platelet (p-selectin) ligand
mm9_v1_chr6_-_58974400_58974495	1.82274	FOXQ1.p2	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chr5_+_145888588_145888809	1.81119	FOXQ1.p2	AK192837|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr17_-_56419161_56419235	1.80867	FOXQ1.p2	AK200250|Plin3|66905|perilipin 3	AK201044|Plin3|66905|perilipin 3	AK210643|Plin3|66905|perilipin 3	AK213759|Plin3|66905|perilipin 3
mm9_v1_chr18_-_80904852_80904931	1.80051	FOXQ1.p2	EU887569|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887571|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887572|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AF049606|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK004810|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164111|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164112|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_016791|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr11_-_99354449_99354450	1.79496	FOXQ1.p2	BC003472|Krt23|94179|keratin 23	AK145247|Krt23|94179|keratin 23
mm9_v1_chr7_+_17491838_17491885	1.79065	FOXQ1.p2	AK033567|Ptgir|19222|prostaglandin I receptor (IP)	NM_008967|Ptgir|19222|prostaglandin I receptor (IP)	D26157|Ptgir|19222|prostaglandin I receptor (IP)	BC094386|Ptgir|19222|prostaglandin I receptor (IP)	AK154272|Ptgir|19222|prostaglandin I receptor (IP)
mm9_v1_chr8_+_55635768_55635781	1.78968	FOXQ1.p2	BC108405|Asb5|76294|ankyrin repeat and SOCs box-containing 5	AF398966|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr7_+_25562222_25562279	1.78572	FOXQ1.p2	NM_007675|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10	BC003346|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10	AK018529|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10	L38422|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10
mm9_v1_chr11_-_121084021_121084125	1.7852	FOXQ1.p2	AK215969|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr2_-_163470870_163470922	1.77771	FOXQ1.p2	NM_012032|Serinc3|26943|serine incorporator 3
mm9_v1_chr1_+_133737686_133737717	1.77531	FOXQ1.p2	BC037033|Slc41a1|98396|solute carrier family 41, member 1
mm9_v1_chr4_+_32504409_32504501	1.7688	FOXQ1.p2	NM_001109661|Bach2|12014|BTB and CNC homology 2	BC131642|Bach2|12014|BTB and CNC homology 2
mm9_v1_chr3_+_5090275_5090294	1.76867	FOXQ1.p2	
mm9_v1_chr6_-_72382855_72382865	1.76786	FOXQ1.p2	
mm9_v1_chr6_+_68375560_68375603	1.7553	FOXQ1.p2	M19911|Igkv16-104|381778|immunoglobulin kappa variable 16-104	X14621|Igkv16-104|381778|immunoglobulin kappa variable 16-104
mm9_v1_chr6_-_129187965_129188001	1.74955	FOXQ1.p2	AK030376|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene	AK009064|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene
mm9_v1_chr12_-_55757465_55757605	1.74733	FOXQ1.p2	AK182833|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	BC022674|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK003275|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK003171|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK008904|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK137543|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	AK018380|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene	NM_134054|1110002B05Rik|104725|RIKEN cDNA 1110002B05 gene
mm9_v1_chr5_+_102910409_102910555	1.74528	FOXQ1.p2	AK080986|Arhgap24|231532|Rho GTPase activating protein 24	NM_029270|Arhgap24|231532|Rho GTPase activating protein 24	NM_146161|Arhgap24|231532|Rho GTPase activating protein 24	AK052395|Arhgap24|231532|Rho GTPase activating protein 24
mm9_v1_chr1_+_24685556_24685610	1.73994	FOXQ1.p2	BC025579|Lmbrd1|68421|LMBR1 domain containing 1	BC031902|Lmbrd1|68421|LMBR1 domain containing 1	AK167080|Lmbrd1|68421|LMBR1 domain containing 1	AK152170|Lmbrd1|68421|LMBR1 domain containing 1	AK153237|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr2_+_61416589_61416667	1.73608	FOXQ1.p2	U59864|Tank|21353|TRAF family member-associated Nf-kappa B activator	NM_011529|Tank|21353|TRAF family member-associated Nf-kappa B activator	BC052685|Tank|21353|TRAF family member-associated Nf-kappa B activator
mm9_v1_chr5_+_20878459_20878530	1.73567	FOXQ1.p2	AK009500|Fgl2|14190|fibrinogen-like protein 2	BC028893|Fgl2|14190|fibrinogen-like protein 2	NM_008013|Fgl2|14190|fibrinogen-like protein 2	AK036402|Fgl2|14190|fibrinogen-like protein 2	AK036784|Fgl2|14190|fibrinogen-like protein 2
mm9_v1_chr5_-_92776027_92776042	1.70358	FOXQ1.p2	AK150987|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr13_-_38069696_38069810	1.69878	FOXQ1.p2	
mm9_v1_chr17_+_37006518_37006546	1.69863	FOXQ1.p2	NM_011280|Trim10|19824|tripartite motif-containing 10	AK011082|Trim10|19824|tripartite motif-containing 10	AF134811|Trim10|19824|tripartite motif-containing 10	BC051632|Trim10|19824|tripartite motif-containing 10	AF220121|Trim10|19824|tripartite motif-containing 10
mm9_v1_chrX_+_104344792_104344792	1.69372	FOXQ1.p2	NM_001122595|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chrX_-_162948399_162948409	1.68775	FOXQ1.p2	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr8_-_42127242_42127289	1.6819	FOXQ1.p2	AK030510|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005865|Mtus1|102103|mitochondrial tumor suppressor 1	AY626781|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr3_-_129035406_129035666	1.66214	FOXQ1.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr6_-_130079852_130079915	1.65502	FOXQ1.p2	AK143236|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	NM_010650|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8	AY338977|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AY338978|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116399|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	BC116400|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	AF288380|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_053151|Klra21|93968|killer cell lectin-like receptor subfamily A, member 21	NM_001101620|Klra8|16639|killer cell lectin-like receptor, subfamily A, member 8
mm9_v1_chr10_-_105011265_105011266	1.65236	FOXQ1.p2	BC138362|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	BC138363|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr10_+_92951512_92951516	1.64327	FOXQ1.p2	AK014518|Hal|15109|histidine ammonia lyase	NM_010401|Hal|15109|histidine ammonia lyase	BC157999|Hal|15109|histidine ammonia lyase
mm9_v1_chr10_+_79326950_79327079	1.63921	FOXQ1.p2	AK189870|Ptbp1|19205|polypyrimidine tract binding protein 1	AK190380|Ptbp1|19205|polypyrimidine tract binding protein 1	AK191581|Ptbp1|19205|polypyrimidine tract binding protein 1	AK192876|Ptbp1|19205|polypyrimidine tract binding protein 1	AK195492|Ptbp1|19205|polypyrimidine tract binding protein 1	AK198834|Ptbp1|19205|polypyrimidine tract binding protein 1	AK200806|Ptbp1|19205|polypyrimidine tract binding protein 1	AK204269|Ptbp1|19205|polypyrimidine tract binding protein 1	AK211894|Ptbp1|19205|polypyrimidine tract binding protein 1	AK217325|Ptbp1|19205|polypyrimidine tract binding protein 1	AK219665|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr5_+_136559785_136559909	1.6324	FOXQ1.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr16_-_92826307_92826318	1.62105	FOXQ1.p2	AK165307|Runx1|12394|runt related transcription factor 1	AK145098|Runx1|12394|runt related transcription factor 1	NM_001111021|Runx1|12394|runt related transcription factor 1	NM_001111022|Runx1|12394|runt related transcription factor 1	AK040240|Runx1|12394|runt related transcription factor 1
mm9_v1_chr11_-_99354417_99354437	1.61626	FOXQ1.p2	BC019972|Krt23|94179|keratin 23	AF102849|Krt23|94179|keratin 23	NM_033373|Krt23|94179|keratin 23	AK036901|Krt23|94179|keratin 23	AK036954|Krt23|94179|keratin 23
mm9_v1_chr17_-_34880784_34880841	1.60811	FOXQ1.p2	BC158005|C4b|12268|complement component 4B (Childo blood group)	BC150743|C4b|12268|complement component 4B (Childo blood group)	BC039141|C4b|12268|complement component 4B (Childo blood group)	BC067394|C4b|12268|complement component 4B (Childo blood group)	BC067409|C4b|12268|complement component 4B (Childo blood group)	BC055297|C4b|12268|complement component 4B (Childo blood group)	AK172637|C4b|12268|complement component 4B (Childo blood group)	AK157954|C4b|12268|complement component 4B (Childo blood group)	AK158256|C4b|12268|complement component 4B (Childo blood group)	AK158475|C4b|12268|complement component 4B (Childo blood group)	AK171644|C4b|12268|complement component 4B (Childo blood group)	M11729|C4b|12268|complement component 4B (Childo blood group)	NM_009780|C4b|12268|complement component 4B (Childo blood group)
mm9_v1_chr7_+_109386818_109386954	1.60781	FOXQ1.p2	AK019004|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr6_-_87800966_87801099	1.60571	FOXQ1.p2	AK078427|Cnbp|12785|cellular nucleic acid binding protein	L12693|Cnbp|12785|cellular nucleic acid binding protein	X63866|Cnbp|12785|cellular nucleic acid binding protein	Z11870|Cnbp|12785|cellular nucleic acid binding protein	Z11871|Cnbp|12785|cellular nucleic acid binding protein	BC058723|Cnbp|12785|cellular nucleic acid binding protein	U20326|Cnbp|12785|cellular nucleic acid binding protein	AK151528|Cnbp|12785|cellular nucleic acid binding protein	AK146593|Cnbp|12785|cellular nucleic acid binding protein	AK159810|Cnbp|12785|cellular nucleic acid binding protein	AK153414|Cnbp|12785|cellular nucleic acid binding protein	AK147157|Cnbp|12785|cellular nucleic acid binding protein	AK146367|Cnbp|12785|cellular nucleic acid binding protein	AK145444|Cnbp|12785|cellular nucleic acid binding protein	AK146224|Cnbp|12785|cellular nucleic acid binding protein	AK151961|Cnbp|12785|cellular nucleic acid binding protein	AK146301|Cnbp|12785|cellular nucleic acid binding protein	AK146344|Cnbp|12785|cellular nucleic acid binding protein	AK151317|Cnbp|12785|cellular nucleic acid binding protein	AK144740|Cnbp|12785|cellular nucleic acid binding protein	AK075760|Cnbp|12785|cellular nucleic acid binding protein	NM_001109745|Cnbp|12785|cellular nucleic acid binding protein	NM_001109746|Cnbp|12785|cellular nucleic acid binding protein	NM_013493|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr7_+_120909680_120909687	1.60377	FOXQ1.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr1_+_137221385_137221392	1.60241	FOXQ1.p2	AK079173|Lmod1|93689|leiomodin 1 (smooth muscle)	AK133276|Lmod1|93689|leiomodin 1 (smooth muscle)	NM_053106|Lmod1|93689|leiomodin 1 (smooth muscle)
mm9_v1_chr7_-_118089700_118089700	1.59219	FOXQ1.p2	NM_010826|Mrvi1|17540|MRV integration site 1	U63408|Mrvi1|17540|MRV integration site 1
mm9_v1_chr17_-_44873596_44873596	1.5909	FOXQ1.p2	D14636|Runx2|12393|runt related transcription factor 2	D14637|Runx2|12393|runt related transcription factor 2	NM_001145920|Runx2|12393|runt related transcription factor 2
mm9_v1_chr1_+_36568707_36568722	1.58583	FOXQ1.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr8_-_55606109_55606134	1.58293	FOXQ1.p2	AK051731|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm9_v1_chr14_-_104243379_104243389	1.5791	FOXQ1.p2	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr2_-_25052129_25052179	1.57634	FOXQ1.p2	AK154508|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK043559|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK082899|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK172142|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene	AK171551|A830007P12Rik|227612|RIKEN cDNA A830007P12 gene
mm9_v1_chr2_+_152495244_152495317	1.57021	FOXQ1.p2	AK051151|H13|14950|histocompatibility 13	AK050664|H13|14950|histocompatibility 13	AK171790|H13|14950|histocompatibility 13	AF515662|H13|14950|histocompatibility 13
mm9_v1_chr2_-_9800211_9800245	1.56971	FOXQ1.p2	AK156634|Gata3|14462|GATA binding protein 3	AK053728|Gata3|14462|GATA binding protein 3	AK090089|Gata3|14462|GATA binding protein 3	AK155549|Gata3|14462|GATA binding protein 3	NM_008091|Gata3|14462|GATA binding protein 3
mm9_v1_chr11_-_86171026_86171057	1.56869	FOXQ1.p2	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr3_+_9250566_9250566	1.56673	FOXQ1.p2	NM_177660|Zbtb10|229055|zinc finger and BTB domain containing 10
mm9_v1_chr1_+_175603760_175603841	1.55871	FOXQ1.p2	AK041099|Pydc3|100033459|pyrin domain containing 3	NM_001162938|Pydc3|100033459|pyrin domain containing 3
mm9_v1_chr15_+_80541675_80541764	1.5569	FOXQ1.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr3_+_89904315_89904415	1.55456	FOXQ1.p2	
mm9_v1_chr11_-_101087730_101087737	1.55047	FOXQ1.p2	AK154565|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr6_-_23082901_23082994	1.5325	FOXQ1.p2	AK149400|Aass|30956|aminoadipate-semialdehyde synthase	AK098141|Aass|30956|aminoadipate-semialdehyde synthase	AK136216|Aass|30956|aminoadipate-semialdehyde synthase	BC005420|Aass|30956|aminoadipate-semialdehyde synthase	AK044323|Aass|30956|aminoadipate-semialdehyde synthase	NM_013930|Aass|30956|aminoadipate-semialdehyde synthase
mm9_v1_chr1_-_45560001_45560126	1.5322	FOXQ1.p2	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr3_+_89904553_89904598	1.5312	FOXQ1.p2	X73607|Tpm3|59069|tropomyosin 3, gamma
mm9_v1_chr10_-_13108775_13108775	1.52573	FOXQ1.p2	AK139466|Phactr2|215789|phosphatase and actin regulator 2	NM_001195066|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr1_+_45401659_45401671	1.52413	FOXQ1.p2	AK079113|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr3_+_142283605_142283716	1.52061	FOXQ1.p2	BC032882|Gbp2|14469|guanylate binding protein 2	AF077007|Gbp2|14469|guanylate binding protein 2	NM_010260|Gbp2|14469|guanylate binding protein 2	BC011336|Gbp2|14469|guanylate binding protein 2	AJ007970|Gbp2|14469|guanylate binding protein 2	BC049141|Gbp2|14469|guanylate binding protein 2	AF109168|Gbp2|14469|guanylate binding protein 2	AK150138|Gbp2|14469|guanylate binding protein 2
mm9_v1_chr1_-_175529396_175529434	1.51526	FOXQ1.p2	AK143015|Pydc4|623121|pyrin domain containing 4	NM_001177349|Pydc4|623121|pyrin domain containing 4	NM_001177350|Pydc4|623121|pyrin domain containing 4
mm9_v1_chr5_+_33760994_33761117	1.51475	FOXQ1.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr2_+_152139317_152139577	1.50813	FOXQ1.p2	AK192023|Tbc1d20|67231|TBC1 domain family, member 20	AK194089|Tbc1d20|67231|TBC1 domain family, member 20	AK199107|Tbc1d20|67231|TBC1 domain family, member 20	AK202139|Tbc1d20|67231|TBC1 domain family, member 20	AK212404|Tbc1d20|67231|TBC1 domain family, member 20	AK213499|Tbc1d20|67231|TBC1 domain family, member 20	AK219611|Tbc1d20|67231|TBC1 domain family, member 20
mm9_v1_chr17_-_35019039_35019055	1.5045	FOXQ1.p2	AK146812|C2|12263|complement component 2 (within H-2S)	NM_013484|C2|12263|complement component 2 (within H-2S)
mm9_v1_chr13_-_27656440_27656472	1.50403	FOXQ1.p2	BC064762|Prl8a9|67310|prolactin family8, subfamily a, member 9	AF158744|Prl8a9|67310|prolactin family8, subfamily a, member 9	AK005409|Prl8a9|67310|prolactin family8, subfamily a, member 9	AK005494|Prl8a9|67310|prolactin family8, subfamily a, member 9	NM_023332|Prl8a9|67310|prolactin family8, subfamily a, member 9
mm9_v1_chr3_-_113126814_113126969	1.49927	FOXQ1.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr18_+_44264117_44264290	1.49178	FOXQ1.p2	DQ437332|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK136616|Spink12|78242|serine peptidase inhibitor, Kazal type 11	NM_030061|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK020352|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145914|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145916|Spink12|78242|serine peptidase inhibitor, Kazal type 11
mm9_v1_chr6_-_142650737_142650793	1.48698	FOXQ1.p2	D86037|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	D86038|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	AF003531|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	U97066|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_001044720|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_011511|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021041|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021042|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
mm9_v1_chr3_+_105261699_105261733	1.48395	FOXQ1.p2	BC141097|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	BC141098|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107781|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	AF107782|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3	NM_019931|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr6_+_4484651_4484672	1.47588	FOXQ1.p2	AK159120|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr19_+_3935169_3935313	1.47091	FOXQ1.p2	NM_001161428|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	NM_019449|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	BC018388|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK030488|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK039526|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK165060|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK155556|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK162535|Unc93b1|54445|unc-93 homolog B1 (C. elegans)
mm9_v1_chr13_+_37437194_37437308	1.47022	FOXQ1.p2	AB007599|Ly86|17084|lymphocyte antigen 86	NM_010745|Ly86|17084|lymphocyte antigen 86	AK027929|Ly86|17084|lymphocyte antigen 86	BC096414|Ly86|17084|lymphocyte antigen 86	BC065783|Ly86|17084|lymphocyte antigen 86
mm9_v1_chr3_+_60432922_60432975	1.46918	FOXQ1.p2	AK166145|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr6_+_129130632_129130672	1.46902	FOXQ1.p2	AY320031|Clec2d|93694|C-type lectin domain family 2, member d	AF321553|Clec2d|93694|C-type lectin domain family 2, member d	NM_053109|Clec2d|93694|C-type lectin domain family 2, member d	AF350409|Clec2d|93694|C-type lectin domain family 2, member d	BC106776|Clec2d|93694|C-type lectin domain family 2, member d
mm9_v1_chr6_+_83293435_83293444	1.46769	FOXQ1.p2	AK196174|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chrX_+_13209894_13209986	1.46583	FOXQ1.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr7_-_87547589_87547748	1.45979	FOXQ1.p2	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr1_-_183112962_183112965	1.44522	FOXQ1.p2	AK167017|Wdr26|226757|WD repeat domain 26	AK167116|Wdr26|226757|WD repeat domain 26
mm9_v1_chr8_+_55635683_55635717	1.445	FOXQ1.p2	AK003770|Asb5|76294|ankyrin repeat and SOCs box-containing 5	NM_029569|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC120851|Asb5|76294|ankyrin repeat and SOCs box-containing 5	BC132007|Asb5|76294|ankyrin repeat and SOCs box-containing 5
mm9_v1_chr10_+_105011586_105011626	1.43831	FOXQ1.p2	AK034146|9330159K06|327812|hypothetical protein 9330159K06
mm9_v1_chr3_-_113159420_113159575	1.43675	FOXQ1.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr8_-_8667108_8667134	1.43663	FOXQ1.p2	AK034581|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr2_+_4322020_4322021	1.42919	FOXQ1.p2	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr14_-_44579933_44579933	1.42887	FOXQ1.p2	NM_001011876|Ang6|630952|angiogenin, ribonuclease A family, member 6
mm9_v1_chr19_-_4287408_4287579	1.42742	FOXQ1.p2	AK153543|Adrbk1|110355|adrenergic receptor kinase, beta 1
mm9_v1_chr4_+_6321713_6321979	1.42329	FOXQ1.p2	AK213873|Sdcbp|53378|syndecan binding protein
mm9_v1_chr12_-_74147683_74147691	1.42187	FOXQ1.p2	BC023304|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr18_+_44493726_44493754	1.42009	FOXQ1.p2	AF230979|Myot|58916|myotilin	AK017447|Myot|58916|myotilin	NM_001033621|Myot|58916|myotilin	BC016214|Myot|58916|myotilin	BC064052|Myot|58916|myotilin
mm9_v1_chr16_-_44016471_44016548	1.41191	FOXQ1.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chrX_-_92673432_92673467	1.40876	FOXQ1.p2	BC107257|Asb12|70392|ankyrin repeat and SOCS box-containing 12	AF403040|Asb12|70392|ankyrin repeat and SOCS box-containing 12	AK009644|Asb12|70392|ankyrin repeat and SOCS box-containing 12	NM_080858|Asb12|70392|ankyrin repeat and SOCS box-containing 12
mm9_v1_chr1_+_45368443_45368526	1.40372	FOXQ1.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr19_-_47766512_47766583	1.39915	FOXQ1.p2	BC125031|Col17a1|12821|collagen, type XVII, alpha 1	BC125032|Col17a1|12821|collagen, type XVII, alpha 1	NM_007732|Col17a1|12821|collagen, type XVII, alpha 1	L08407|Col17a1|12821|collagen, type XVII, alpha 1
mm9_v1_chr13_-_67162084_67162105	1.39345	FOXQ1.p2	AK019536|Zfp712|78251|zinc finger protein 712	NM_001166218|Zfp712|78251|zinc finger protein 712
mm9_v1_chr17_-_18020889_18020919	1.39284	FOXQ1.p2	NM_013521|Fpr1|14293|formyl peptide receptor 1	AK137714|Fpr1|14293|formyl peptide receptor 1
mm9_v1_chr11_-_60013141_60013246	1.39049	FOXQ1.p2	AK040663|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr12_-_119474010_119474093	1.38471	FOXQ1.p2	AK017738|Sp4|20688|trans-acting transcription factor 4
mm9_v1_chr14_+_66016119_66016146	1.38357	FOXQ1.p2	BC027382|Zfp395|380912|zinc finger protein 395
mm9_v1_chr9_+_7558476_7558530	1.38325	FOXQ1.p2	Y13342|Mmp8|17394|matrix metallopeptidase 8
mm9_v1_chr6_-_3295980_3296101	1.37587	FOXQ1.p2	AK035387|9530028C05|330256|hypothetical protein 9530028C05
mm9_v1_chr4_-_142889372_142889476	1.37205	FOXQ1.p2	NM_010329|Pdpn|14726|podoplanin	AK158855|Pdpn|14726|podoplanin
mm9_v1_chr7_+_28914482_28914484	1.36511	FOXQ1.p2	AK035473|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	AK035528|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	NM_001164655|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene
mm9_v1_chr3_-_112959644_112959644	1.36263	FOXQ1.p2	NM_001190403|Amy2b|545562|amylase 2b	NM_001190404|Amy2b|545562|amylase 2b
mm9_v1_chr12_-_103196366_103196464	1.36094	FOXQ1.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr8_+_24249481_24249576	1.35731	FOXQ1.p2	U73972|Ank1|11733|ankyrin 1, erythroid	BC061219|Ank1|11733|ankyrin 1, erythroid	AK134267|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr2_+_163978972_163979077	1.34592	FOXQ1.p2	AK085750|Stk4|58231|serine/threonine kinase 4
mm9_v1_chr8_+_68910191_68910205	1.34396	FOXQ1.p2	AK036489|March1|72925|membrane-associated ring finger (C3HC4) 1	AK089040|March1|72925|membrane-associated ring finger (C3HC4) 1	AK152592|March1|72925|membrane-associated ring finger (C3HC4) 1	AK163081|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166375|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr16_+_59148654_59148677	1.34386	FOXQ1.p2	BC119110|Olfr195|259000|olfactory receptor 195	NM_146998|Olfr195|259000|olfactory receptor 195
mm9_v1_chr8_+_46970814_46970842	1.33859	FOXQ1.p2	AF002283|Pdlim3|53318|PDZ and LIM domain 3	NM_016798|Pdlim3|53318|PDZ and LIM domain 3	AK078421|Pdlim3|53318|PDZ and LIM domain 3	AK141331|Pdlim3|53318|PDZ and LIM domain 3	AK164054|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr15_+_102797295_102797295	1.33225	FOXQ1.p2	AK033186|Hoxc10|209448|homeobox C10	NM_010462|Hoxc10|209448|homeobox C10
mm9_v1_chr14_-_45838944_45839057	1.32358	FOXQ1.p2	BC052488|Txndc16|70561|thioredoxin domain containing 16	AK017582|Txndc16|70561|thioredoxin domain containing 16	AK034025|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr19_+_56798916_56798947	1.32116	FOXQ1.p2	AK039569|Adrb1|11554|adrenergic receptor, beta 1
mm9_v1_chr13_-_41582649_41582707	1.31826	FOXQ1.p2	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr11_-_78020699_78020746	1.31766	FOXQ1.p2	
mm9_v1_chr3_-_88351996_88352227	1.31518	FOXQ1.p2	AB232620|Rab25|53868|RAB25, member RAS oncogene family	AF119675|Rab25|53868|RAB25, member RAS oncogene family	BC006624|Rab25|53868|RAB25, member RAS oncogene family	AK003260|Rab25|53868|RAB25, member RAS oncogene family	NM_016899|Rab25|53868|RAB25, member RAS oncogene family
mm9_v1_chrX_+_156411885_156411895	1.31457	FOXQ1.p2	AK200438|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr7_-_91763744_91763768	1.31434	FOXQ1.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chrX_+_130385546_130385673	1.31414	FOXQ1.p2	BC049944|Tnmd|64103|tenomodulin	NM_022322|Tnmd|64103|tenomodulin	AF191768|Tnmd|64103|tenomodulin	AK003748|Tnmd|64103|tenomodulin	AF219993|Tnmd|64103|tenomodulin
mm9_v1_chr3_-_113094211_113094366	1.31255	FOXQ1.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr16_+_44943790_44943885	1.3099	FOXQ1.p2	NM_001128132|Cd200r3|74603|CD200 receptor 3	NM_001128133|Cd200r3|74603|CD200 receptor 3	NM_027578|Cd200r3|74603|CD200 receptor 3	NM_029018|Cd200r3|74603|CD200 receptor 3	AK040868|Cd200r3|74603|CD200 receptor 3	AK014637|Cd200r3|74603|CD200 receptor 3	AY230199|Cd200r3|74603|CD200 receptor 3	BC106838|Cd200r3|74603|CD200 receptor 3	AK014671|Cd200r3|74603|CD200 receptor 3	AK170363|Cd200r3|74603|CD200 receptor 3	AY703837|Cd200r3|74603|CD200 receptor 3	AY703838|Cd200r3|74603|CD200 receptor 3	AY703839|Cd200r3|74603|CD200 receptor 3	AY703840|Cd200r3|74603|CD200 receptor 3	AY703841|Cd200r3|74603|CD200 receptor 3	AY703842|Cd200r3|74603|CD200 receptor 3
mm9_v1_chr1_-_136852427_136852528	1.30696	FOXQ1.p2	BC145746|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK046012|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK046167|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK080855|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK141375|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK042847|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	NM_001081307|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B	AK007727|Ppp1r12b|329251|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm9_v1_chr19_+_34625183_34625183	1.30531	FOXQ1.p2	NM_008332|Ifit2|15958|interferon-induced protein with tetratricopeptide repeats 2
mm9_v1_chr9_+_123715592_123715616	1.30467	FOXQ1.p2	AF305709|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	NM_030712|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK153914|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK052901|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AF301018|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK137703|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	BC096491|Cxcr6|80901|chemokine (C-X-C motif) receptor 6
mm9_v1_chr10_+_94039007_94039007	1.30035	FOXQ1.p2	NM_177026|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr6_-_129573858_129573881	1.29716	FOXQ1.p2	AF030313|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_001083322|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK170499|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr6_-_87285690_87285768	1.29277	FOXQ1.p2	AF378762|Antxr1|69538|anthrax toxin receptor 1	BC094544|Antxr1|69538|anthrax toxin receptor 1	AK031465|Antxr1|69538|anthrax toxin receptor 1	NM_054041|Antxr1|69538|anthrax toxin receptor 1
mm9_v1_chrX_+_130385690_130385739	1.29101	FOXQ1.p2	AK014761|Tnmd|64103|tenomodulin	BC006919|Tnmd|64103|tenomodulin	AB055422|Tnmd|64103|tenomodulin
mm9_v1_chr14_-_118450875_118451546	1.29081	FOXQ1.p2	EU554632|Dct|13190|dopachrome tautomerase	AK214181|Dct|13190|dopachrome tautomerase	AK214448|Dct|13190|dopachrome tautomerase	AK217087|Dct|13190|dopachrome tautomerase	AK212164|Dct|13190|dopachrome tautomerase	AK219002|Dct|13190|dopachrome tautomerase	BC082330|Dct|13190|dopachrome tautomerase	AK209892|Dct|13190|dopachrome tautomerase	AK191654|Dct|13190|dopachrome tautomerase	BC067064|Dct|13190|dopachrome tautomerase	X63349|Dct|13190|dopachrome tautomerase	AK033040|Dct|13190|dopachrome tautomerase	NM_010024|Dct|13190|dopachrome tautomerase	AK202452|Dct|13190|dopachrome tautomerase
mm9_v1_chr18_+_69843588_69843609	1.27661	FOXQ1.p2	AK017365|Tcf4|21413|transcription factor 4
mm9_v1_chr18_+_60542336_60542369	1.25765	FOXQ1.p2	AK089702|Iigp1|60440|interferon inducible GTPase 1	BC004649|Iigp1|60440|interferon inducible GTPase 1
mm9_v1_chr7_-_148452299_148452324	1.25294	FOXQ1.p2	NM_016850|Irf7|54123|interferon regulatory factor 7	U73037|Irf7|54123|interferon regulatory factor 7	AK004349|Irf7|54123|interferon regulatory factor 7	AK150608|Irf7|54123|interferon regulatory factor 7	AK158378|Irf7|54123|interferon regulatory factor 7	AK158403|Irf7|54123|interferon regulatory factor 7	AK089869|Irf7|54123|interferon regulatory factor 7	AK002830|Irf7|54123|interferon regulatory factor 7	AK079685|Irf7|54123|interferon regulatory factor 7	AK150403|Irf7|54123|interferon regulatory factor 7	AK151470|Irf7|54123|interferon regulatory factor 7	AK152401|Irf7|54123|interferon regulatory factor 7	AK152403|Irf7|54123|interferon regulatory factor 7	AK153054|Irf7|54123|interferon regulatory factor 7	AK155950|Irf7|54123|interferon regulatory factor 7	AK159142|Irf7|54123|interferon regulatory factor 7	AK159883|Irf7|54123|interferon regulatory factor 7
mm9_v1_chr1_+_140864297_140864301	1.25173	FOXQ1.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr16_+_45610535_45610644	1.24676	FOXQ1.p2	AK036553|Gcet2|14525|germinal center expressed transcript 2	NM_001159297|Gcet2|14525|germinal center expressed transcript 2	NM_008099|Gcet2|14525|germinal center expressed transcript 2	U13263|Gcet2|14525|germinal center expressed transcript 2	BC099585|Gcet2|14525|germinal center expressed transcript 2	AY500830|Gcet2|14525|germinal center expressed transcript 2
mm9_v1_chrX_+_104344953_104344955	1.24323	FOXQ1.p2	NM_175442|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene	AK041740|A630033H20Rik|213438|RIKEN cDNA A630033H20 gene
mm9_v1_chr2_+_69560861_69560899	1.2419	FOXQ1.p2	BC016126|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC048905|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr4_-_147874557_147874570	1.23847	FOXQ1.p2	BC023373|Angptl7|654812|angiopoietin-like 7	AK031675|Angptl7|654812|angiopoietin-like 7	NM_001039554|Angptl7|654812|angiopoietin-like 7
mm9_v1_chrX_-_75491259_75491259	1.23458	FOXQ1.p2	NM_001126321|Gm14743|236874|predicted gene 14743
mm9_v1_chrX_-_154006916_154006936	1.22905	FOXQ1.p2	AK161451|Yy2|100073351|Yy2 transcription factor	NM_001098723|Yy2|100073351|Yy2 transcription factor	AK077220|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr19_-_41069024_41069024	1.22801	FOXQ1.p2	NM_008528|Blnk|17060|B-cell linker	Y17159|Blnk|17060|B-cell linker
mm9_v1_chr2_-_163470787_163470825	1.22701	FOXQ1.p2	AB029499|Serinc3|26943|serine incorporator 3	AF181684|Serinc3|26943|serine incorporator 3	BC022901|Serinc3|26943|serine incorporator 3	AK170350|Serinc3|26943|serine incorporator 3	AK152720|Serinc3|26943|serine incorporator 3	AK159347|Serinc3|26943|serine incorporator 3	AK150106|Serinc3|26943|serine incorporator 3	AK155921|Serinc3|26943|serine incorporator 3	AK159488|Serinc3|26943|serine incorporator 3	AK159819|Serinc3|26943|serine incorporator 3	AK160005|Serinc3|26943|serine incorporator 3	AK160055|Serinc3|26943|serine incorporator 3	AK161981|Serinc3|26943|serine incorporator 3	AK164807|Serinc3|26943|serine incorporator 3	AK166924|Serinc3|26943|serine incorporator 3	AK145604|Serinc3|26943|serine incorporator 3
mm9_v1_chr7_+_63185457_63185630	1.22183	FOXQ1.p2	AK195390|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1	AK052509|Cyfip1|20430|cytoplasmic FMR1 interacting protein 1
mm9_v1_chr17_+_34052312_34052432	1.21753	FOXQ1.p2	
mm9_v1_chr13_-_101386865_101386925	1.21487	FOXQ1.p2	DQ143929|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682659|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682661|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK156238|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_178410|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK133741|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_001038602|Marveld2|218518|MARVEL (membrane-associating) domain containing 2
mm9_v1_chr1_+_154613763_154613962	1.20984	FOXQ1.p2	AK166335|Arpc5|67771|actin related protein 2/3 complex, subunit 5	BC060143|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166284|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166725|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166919|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK008097|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151656|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK152281|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159738|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011348|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011911|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017669|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK019149|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150443|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150703|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK153262|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK149756|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151654|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168264|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK087427|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151490|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159438|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK167916|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168986|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK191774|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK181325|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK187022|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK189385|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK208127|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK209531|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr15_+_102797226_102797241	1.20907	FOXQ1.p2	BC053405|Hoxc10|209448|homeobox C10	AK138664|Hoxc10|209448|homeobox C10
mm9_v1_chr2_+_24132788_24133018	1.20608	FOXQ1.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr2_-_156005873_156005985	1.20581	FOXQ1.p2	AY061882|Rbm39|170791|RNA binding motif protein 39	BC023205|Rbm39|170791|RNA binding motif protein 39	AK156737|Rbm39|170791|RNA binding motif protein 39	AK009719|Rbm39|170791|RNA binding motif protein 39	BC086645|Rbm39|170791|RNA binding motif protein 39	AK154989|Rbm39|170791|RNA binding motif protein 39	AK147076|Rbm39|170791|RNA binding motif protein 39	AK167355|Rbm39|170791|RNA binding motif protein 39	AK005227|Rbm39|170791|RNA binding motif protein 39	AK005234|Rbm39|170791|RNA binding motif protein 39	AK155976|Rbm39|170791|RNA binding motif protein 39	NM_133242|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr11_+_8948594_8948715	1.20389	FOXQ1.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chr4_-_73596693_73596749	1.20285	FOXQ1.p2	BC115483|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	BC115484|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009124|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	AK009097|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027104|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene	NM_027981|2310002L09Rik|71886|RIKEN cDNA 2310002L09 gene
mm9_v1_chr16_-_31314534_31314685	1.20151	FOXQ1.p2	X82648|Apod|11815|apolipoprotein D	AK158118|Apod|11815|apolipoprotein D	AK157925|Apod|11815|apolipoprotein D	AK135046|Apod|11815|apolipoprotein D	AK157917|Apod|11815|apolipoprotein D	AK160729|Apod|11815|apolipoprotein D	AK162392|Apod|11815|apolipoprotein D	NM_007470|Apod|11815|apolipoprotein D	AK158405|Apod|11815|apolipoprotein D
mm9_v1_chr18_+_69843730_69844096	1.19856	FOXQ1.p2	AK021032|Tcf4|21413|transcription factor 4	AK047926|Tcf4|21413|transcription factor 4	AK045400|Tcf4|21413|transcription factor 4	AK083152|Tcf4|21413|transcription factor 4	AK039181|Tcf4|21413|transcription factor 4	AK040346|Tcf4|21413|transcription factor 4	AK032345|Tcf4|21413|transcription factor 4
mm9_v1_chr3_+_19869841_19869871	1.19832	FOXQ1.p2	AK160035|Cp|12870|ceruloplasmin
mm9_v1_chr2_+_90936845_90937066	1.19702	FOXQ1.p2	AK154945|Sfpi1|20375|SFFV proviral integration 1	AK155085|Sfpi1|20375|SFFV proviral integration 1	AK153524|Sfpi1|20375|SFFV proviral integration 1	AK142246|Sfpi1|20375|SFFV proviral integration 1	M38252|Sfpi1|20375|SFFV proviral integration 1	NM_011355|Sfpi1|20375|SFFV proviral integration 1	M32370|Sfpi1|20375|SFFV proviral integration 1	BC003815|Sfpi1|20375|SFFV proviral integration 1	L03215|Sfpi1|20375|SFFV proviral integration 1
mm9_v1_chr4_-_46417054_46417104	1.19375	FOXQ1.p2	AF269248|Hemgn|93966|hemogen	NM_053149|Hemgn|93966|hemogen	AK171906|Hemgn|93966|hemogen
mm9_v1_chr4_-_131481251_131481396	1.19271	FOXQ1.p2	AK010038|Epb4.1|269587|erythrocyte protein band 4.1	AK213490|Epb4.1|269587|erythrocyte protein band 4.1	AK214122|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr11_-_100683830_100683883	1.19209	FOXQ1.p2	AY040231|Stat5b|20851|signal transducer and activator of transcription 5B	AY042906|Stat5b|20851|signal transducer and activator of transcription 5B	AY044901|Stat5b|20851|signal transducer and activator of transcription 5B	AY044902|Stat5b|20851|signal transducer and activator of transcription 5B	AY044903|Stat5b|20851|signal transducer and activator of transcription 5B	U21110|Stat5b|20851|signal transducer and activator of transcription 5B	AK088966|Stat5b|20851|signal transducer and activator of transcription 5B	AK154014|Stat5b|20851|signal transducer and activator of transcription 5B	NM_011489|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr12_+_112692786_112692860	1.1915	FOXQ1.p2	
mm9_v1_chr6_+_83293025_83293050	1.18978	FOXQ1.p2	BC011285|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chrX_-_35774388_35774405	1.18465	FOXQ1.p2	AK080234|Lamp2|16784|lysosomal-associated membrane protein 2
mm9_v1_chr16_+_36277233_36277264	1.18415	FOXQ1.p2	NM_001082543|Stfa1|20861|stefin A1	M92417|Stfa1|20861|stefin A1
mm9_v1_chr6_+_42214999_42215177	1.18413	FOXQ1.p2	NM_007610|Casp2|12366|caspase 2	Y13085|Casp2|12366|caspase 2	BC034262|Casp2|12366|caspase 2	AK170649|Casp2|12366|caspase 2	AK052396|Casp2|12366|caspase 2	AK133829|Casp2|12366|caspase 2	AK042072|Casp2|12366|caspase 2	D28492|Casp2|12366|caspase 2	AK199368|Casp2|12366|caspase 2	AK210521|Casp2|12366|caspase 2
mm9_v1_chr2_-_102741782_102741821	1.17978	FOXQ1.p2	NM_001039150|Cd44|12505|CD44 antigen	NM_001039151|Cd44|12505|CD44 antigen	NM_001177785|Cd44|12505|CD44 antigen	NM_001177786|Cd44|12505|CD44 antigen	NM_001177787|Cd44|12505|CD44 antigen	NM_009851|Cd44|12505|CD44 antigen
mm9_v1_chr10_+_79390058_79390085	1.17889	FOXQ1.p2	AK141283|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)
mm9_v1_chr12_+_33535650_33535652	1.17469	FOXQ1.p2	AK004117|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr14_+_55082960_55083081	1.17112	FOXQ1.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr14_-_21553511_21553571	1.16971	FOXQ1.p2	BC050829|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2	AK150100|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2	AK170298|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm9_v1_chr4_-_142889312_142889356	1.16519	FOXQ1.p2	M73748|Pdpn|14726|podoplanin	BC026551|Pdpn|14726|podoplanin
mm9_v1_chr2_+_24242134_24242148	1.16134	FOXQ1.p2	AK150238|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK155249|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK169859|Psd4|215632|pleckstrin and Sec7 domain containing 4
mm9_v1_chr5_+_32794685_32794762	1.16107	FOXQ1.p2	AK017392|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr17_-_27327042_27327306	1.15802	FOXQ1.p2	AK217086|Lemd2|224640|LEM domain containing 2	AK212367|Lemd2|224640|LEM domain containing 2
mm9_v1_chr2_+_49307005_49307084	1.15	FOXQ1.p2	NM_172663|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)	AK031025|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)
mm9_v1_chr4_-_46416895_46416973	1.14823	FOXQ1.p2	AK077692|Hemgn|93966|hemogen	AY699986|Hemgn|93966|hemogen	AK156536|Hemgn|93966|hemogen	AK171890|Hemgn|93966|hemogen	AK172421|Hemgn|93966|hemogen
mm9_v1_chr4_-_118846460_118846468	1.14706	FOXQ1.p2	AK032431|Zfp691|195522|zinc finger protein 691	AK171649|Zfp691|195522|zinc finger protein 691	NM_001145935|Zfp691|195522|zinc finger protein 691	NM_183140|Zfp691|195522|zinc finger protein 691
mm9_v1_chr9_+_74823917_74823980	1.1375	FOXQ1.p2	BC031353|BC031353|235493|cDNA sequence BC031353	NM_153584|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr6_+_34334201_34334334	1.13496	FOXQ1.p2	AK075865|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	NM_172398|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	BC026843|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK087002|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK082777|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK019906|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK169490|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)
mm9_v1_chr9_-_59988919_59989026	1.13429	FOXQ1.p2	BC139329|Thsd4|207596|thrombospondin, type I, domain containing 4	AK045414|Thsd4|207596|thrombospondin, type I, domain containing 4	NM_172444|Thsd4|207596|thrombospondin, type I, domain containing 4
mm9_v1_chr6_+_48689045_48689097	1.12987	FOXQ1.p2	NM_008376|Gimap1|16205|GTPase, IMAP family member 1	NM_175860|Gimap1|16205|GTPase, IMAP family member 1	AK156732|Gimap1|16205|GTPase, IMAP family member 1	BC132601|Gimap1|16205|GTPase, IMAP family member 1	BC132603|Gimap1|16205|GTPase, IMAP family member 1	AK169133|Gimap1|16205|GTPase, IMAP family member 1
mm9_v1_chr2_-_37558794_37558806	1.12359	FOXQ1.p2	BC014710|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr6_+_121596815_121596927	1.11905	FOXQ1.p2	BC023844|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr1_-_127289729_127289773	1.11826	FOXQ1.p2	
mm9_v1_chr11_+_33946927_33946930	1.11757	FOXQ1.p2	AK170491|Lcp2|16822|lymphocyte cytosolic protein 2
mm9_v1_chr9_+_7558428_7558469	1.10933	FOXQ1.p2	NM_008611|Mmp8|17394|matrix metallopeptidase 8	BC042742|Mmp8|17394|matrix metallopeptidase 8	AK089336|Mmp8|17394|matrix metallopeptidase 8	AK155901|Mmp8|17394|matrix metallopeptidase 8	AK171613|Mmp8|17394|matrix metallopeptidase 8	AK089234|Mmp8|17394|matrix metallopeptidase 8	AK154937|Mmp8|17394|matrix metallopeptidase 8	AK089381|Mmp8|17394|matrix metallopeptidase 8	AK137468|Mmp8|17394|matrix metallopeptidase 8	AK155740|Mmp8|17394|matrix metallopeptidase 8	AK155832|Mmp8|17394|matrix metallopeptidase 8	AK170177|Mmp8|17394|matrix metallopeptidase 8	AK170388|Mmp8|17394|matrix metallopeptidase 8	AK170760|Mmp8|17394|matrix metallopeptidase 8	AK171168|Mmp8|17394|matrix metallopeptidase 8	U96696|Mmp8|17394|matrix metallopeptidase 8	AK089516|Mmp8|17394|matrix metallopeptidase 8
mm9_v1_chr10_-_67741461_67741487	1.10464	FOXQ1.p2	AK029818|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	AK031596|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	AK017396|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	NM_023598|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)	AF280065|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)
mm9_v1_chr15_+_10106992_10106998	1.10096	FOXQ1.p2	AK054551|Prlr|19116|prolactin receptor	NM_011169|Prlr|19116|prolactin receptor	AK042147|Prlr|19116|prolactin receptor
mm9_v1_chr16_-_4679664_4679776	1.10076	FOXQ1.p2	AK143624|Coro7|78885|coronin 7	AK018739|Coro7|78885|coronin 7	AK088155|Coro7|78885|coronin 7	AK041000|Coro7|78885|coronin 7	AK037894|Coro7|78885|coronin 7	BC061006|Coro7|78885|coronin 7	NM_030205|Coro7|78885|coronin 7	AK040408|Coro7|78885|coronin 7	AK150051|Coro7|78885|coronin 7	AK039585|Coro7|78885|coronin 7
mm9_v1_chr13_+_97408920_97408964	1.09751	FOXQ1.p2	AK020301|Col4a3bp|68018|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm9_v1_chr6_+_48563178_48563183	1.09647	FOXQ1.p2	AK048054|Zfp775|243372|zinc finger protein 775	NM_173429|Zfp775|243372|zinc finger protein 775
mm9_v1_chr18_-_39078304_39078358	1.09011	FOXQ1.p2	U67610|Fgf1|14164|fibroblast growth factor 1	AK035330|Fgf1|14164|fibroblast growth factor 1	NM_010197|Fgf1|14164|fibroblast growth factor 1
mm9_v1_chr6_-_16848352_16848440	1.08763	FOXQ1.p2	AK156327|Tcfec|21426|transcription factor EC	AK159579|Tcfec|21426|transcription factor EC	BC052832|Tcfec|21426|transcription factor EC	BC064770|Tcfec|21426|transcription factor EC	AK137141|Tcfec|21426|transcription factor EC	AF077742|Tcfec|21426|transcription factor EC	AK157426|Tcfec|21426|transcription factor EC	NM_031198|Tcfec|21426|transcription factor EC
mm9_v1_chr6_+_113408477_113408477	1.08606	FOXQ1.p2	AK046302|Il17re|57890|interleukin 17 receptor E	NM_145826|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr2_-_126719808_126719853	1.08071	FOXQ1.p2	AK080421|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene	AK081953|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene
mm9_v1_chr2_+_160471695_160471802	1.07379	FOXQ1.p2	AK164061|Top1|21969|topoisomerase (DNA) I	AK083930|Top1|21969|topoisomerase (DNA) I	AK166844|Top1|21969|topoisomerase (DNA) I	BC048743|Top1|21969|topoisomerase (DNA) I	BC002095|Top1|21969|topoisomerase (DNA) I	AK160590|Top1|21969|topoisomerase (DNA) I	BC092349|Top1|21969|topoisomerase (DNA) I
mm9_v1_chr5_+_104631633_104631713	1.07198	FOXQ1.p2	AK132177|Dmp1|13406|dentin matrix protein 1	AK157973|Dmp1|13406|dentin matrix protein 1	NM_016779|Dmp1|13406|dentin matrix protein 1	U65020|Dmp1|13406|dentin matrix protein 1	BC113753|Dmp1|13406|dentin matrix protein 1
mm9_v1_chr10_-_60915251_60915468	1.06978	FOXQ1.p2	AK133912|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	BC119539|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	NM_010124|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2	U75530|Eif4ebp2|13688|eukaryotic translation initiation factor 4E binding protein 2
mm9_v1_chr2_-_102741483_102741651	1.06869	FOXQ1.p2	J05163|Cd44|12505|CD44 antigen	CT010324|Cd44|12505|CD44 antigen	X66081|Cd44|12505|CD44 antigen	X66082|Cd44|12505|CD44 antigen	X66083|Cd44|12505|CD44 antigen	X66084|Cd44|12505|CD44 antigen	BC005676|Cd44|12505|CD44 antigen	AJ251594|Cd44|12505|CD44 antigen	M30655|Cd44|12505|CD44 antigen	AK154411|Cd44|12505|CD44 antigen	AK166320|Cd44|12505|CD44 antigen	AK087472|Cd44|12505|CD44 antigen	AK152099|Cd44|12505|CD44 antigen	AK162720|Cd44|12505|CD44 antigen	AK144125|Cd44|12505|CD44 antigen	BC051388|Cd44|12505|CD44 antigen
mm9_v1_chr13_+_49639799_49639811	1.06822	FOXQ1.p2	NM_001172481|Aspn|66695|asporin	NM_025711|Aspn|66695|asporin
mm9_v1_chr8_-_42140113_42140147	1.06399	FOXQ1.p2	BC043321|Mtus1|102103|mitochondrial tumor suppressor 1	AK043214|Mtus1|102103|mitochondrial tumor suppressor 1	AY626782|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005864|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chr4_+_97439255_97439362	1.06231	FOXQ1.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr9_-_77391865_77391878	1.061	FOXQ1.p2	AK082721|Lrrc1|214345|leucine rich repeat containing 1	NM_172528|Lrrc1|214345|leucine rich repeat containing 1	AK053293|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chrX_-_35772763_35772868	1.0596	FOXQ1.p2	
mm9_v1_chr11_-_114851199_114851245	1.05773	FOXQ1.p2	BC019814|Cd300ld|217305|CD300 molecule-like family member d	NM_145437|Cd300ld|217305|CD300 molecule-like family member d	AK028662|Cd300ld|217305|CD300 molecule-like family member d	AK041292|Cd300ld|217305|CD300 molecule-like family member d
mm9_v1_chr6_-_69651268_69651335	1.05597	FOXQ1.p2	
mm9_v1_chr3_-_130412297_130412356	1.0524	FOXQ1.p2	AK011085|Ostc|66357|oligosaccharyltransferase complex subunit	AK017845|Ostc|66357|oligosaccharyltransferase complex subunit	AK135332|Ostc|66357|oligosaccharyltransferase complex subunit	AK013011|Ostc|66357|oligosaccharyltransferase complex subunit	AK032969|Ostc|66357|oligosaccharyltransferase complex subunit	AK009237|Ostc|66357|oligosaccharyltransferase complex subunit	BC014799|Ostc|66357|oligosaccharyltransferase complex subunit	BC021935|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr1_+_158769044_158769153	1.05174	FOXQ1.p2	AK142319|Angptl1|72713|angiopoietin-like 1	AK012888|Angptl1|72713|angiopoietin-like 1	BC082563|Angptl1|72713|angiopoietin-like 1	NM_028333|Angptl1|72713|angiopoietin-like 1
mm9_v1_chr11_+_46624300_46624301	1.05096	FOXQ1.p2	AK080212|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	NM_178759|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK046560|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK079787|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AK080042|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376716|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4	AY376717|Timd4|276891|T-cell immunoglobulin and mucin domain containing 4
mm9_v1_chr9_+_121643763_121643808	1.05075	FOXQ1.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr2_-_106899807_106899807	1.05039	FOXQ1.p2	AK017593|Fshb|14308|follicle stimulating hormone beta	BC061159|Fshb|14308|follicle stimulating hormone beta	NM_008045|Fshb|14308|follicle stimulating hormone beta
mm9_v1_chr4_-_118846799_118846813	1.05032	FOXQ1.p2	NM_001145936|Zfp691|195522|zinc finger protein 691
mm9_v1_chr3_+_59885782_59885794	1.05012	FOXQ1.p2	AF295367|Sucnr1|84112|succinate receptor 1	AK080866|Sucnr1|84112|succinate receptor 1	NM_032400|Sucnr1|84112|succinate receptor 1
mm9_v1_chr1_+_133535033_133535043	1.05001	FOXQ1.p2	AK145875|Ctse|13034|cathepsin E
mm9_v1_chr5_+_123526279_123526440	1.04857	FOXQ1.p2	NM_001039723|Tmem120b|330189|transmembrane protein 120B	AK132283|Tmem120b|330189|transmembrane protein 120B	AK158123|Tmem120b|330189|transmembrane protein 120B	BC022593|Tmem120b|330189|transmembrane protein 120B	BC115785|Tmem120b|330189|transmembrane protein 120B	BC118014|Tmem120b|330189|transmembrane protein 120B	AK172110|Tmem120b|330189|transmembrane protein 120B
mm9_v1_chr19_-_8797689_8797858	1.04727	FOXQ1.p2	AK161280|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	NM_001161413|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr13_+_27248667_27248686	1.0446	FOXQ1.p2	AF525161|Prl3d3|215029|prolactin family 3, subfamily d, member 3	NM_172156|Prl3d3|215029|prolactin family 3, subfamily d, member 3	BC068253|Prl3d3|215029|prolactin family 3, subfamily d, member 3
mm9_v1_chr1_-_45559700_45559773	1.04128	FOXQ1.p2	AK139130|Col5a2|12832|collagen, type V, alpha 2	AK160008|Col5a2|12832|collagen, type V, alpha 2	L02918|Col5a2|12832|collagen, type V, alpha 2	AK084803|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr2_-_163470841_163470868	1.03924	FOXQ1.p2	BC029026|Serinc3|26943|serine incorporator 3	BC029980|Serinc3|26943|serine incorporator 3	AK031101|Serinc3|26943|serine incorporator 3
mm9_v1_chr5_+_92760866_92760867	1.03562	FOXQ1.p2	AK016257|Art3|109979|ADP-ribosyltransferase 3	AK040709|Art3|109979|ADP-ribosyltransferase 3	NM_181728|Art3|109979|ADP-ribosyltransferase 3	DQ519368|Art3|109979|ADP-ribosyltransferase 3	DQ519369|Art3|109979|ADP-ribosyltransferase 3	DQ810295|Art3|109979|ADP-ribosyltransferase 3
mm9_v1_chr10_+_92951804_92951841	1.03509	FOXQ1.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr5_+_32761533_32761558	1.03408	FOXQ1.p2	AK147112|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK157914|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr12_-_86097674_86097704	1.03179	FOXQ1.p2	AK212383|Npc2|67963|Niemann Pick type C2	AK216457|Npc2|67963|Niemann Pick type C2
mm9_v1_chr10_-_59414516_59414582	1.0304	FOXQ1.p2	BC131992|Ddit4|74747|DNA-damage-inducible transcript 4	BC132645|Ddit4|74747|DNA-damage-inducible transcript 4	BC145370|Ddit4|74747|DNA-damage-inducible transcript 4	AK017926|Ddit4|74747|DNA-damage-inducible transcript 4	NM_029083|Ddit4|74747|DNA-damage-inducible transcript 4	AK081046|Ddit4|74747|DNA-damage-inducible transcript 4
mm9_v1_chr13_-_67433435_67433495	1.02907	FOXQ1.p2	BC141018|Zfp595|218314|zinc finger protein 595	AK134150|Zfp595|218314|zinc finger protein 595	AK154058|Zfp595|218314|zinc finger protein 595	AK136304|Zfp595|218314|zinc finger protein 595	AK038563|Zfp595|218314|zinc finger protein 595	NM_177622|Zfp595|218314|zinc finger protein 595
mm9_v1_chr15_-_101363197_101363254	1.02894	FOXQ1.p2	AY028607|Krt84|16680|keratin 84	BC114971|Krt84|16680|keratin 84	NM_008474|Krt84|16680|keratin 84
mm9_v1_chr18_-_58169723_58169818	1.02768	FOXQ1.p2	BC063774|Fbn2|14119|fibrillin 2
mm9_v1_chr7_+_128219633_128219975	1.02107	FOXQ1.p2	AK003378|Mettl9|59052|methyltransferase like 9	AK194757|Mettl9|59052|methyltransferase like 9	AK206305|Mettl9|59052|methyltransferase like 9	AK208785|Mettl9|59052|methyltransferase like 9	AK209460|Mettl9|59052|methyltransferase like 9	AK211016|Mettl9|59052|methyltransferase like 9	AK212761|Mettl9|59052|methyltransferase like 9	AK216310|Mettl9|59052|methyltransferase like 9	AK218040|Mettl9|59052|methyltransferase like 9	AK196516|Mettl9|59052|methyltransferase like 9	AK199334|Mettl9|59052|methyltransferase like 9	AK212785|Mettl9|59052|methyltransferase like 9
mm9_v1_chr11_-_120092784_120092898	1.02047	FOXQ1.p2	AK034741|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK162948|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK013668|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene
mm9_v1_chr2_-_164104007_164104044	1.0196	FOXQ1.p2	M35732|Svs4|20941|seminal vesicle secretory protein 4	AK020349|Svs4|20941|seminal vesicle secretory protein 4	BC115604|Svs4|20941|seminal vesicle secretory protein 4	BC115605|Svs4|20941|seminal vesicle secretory protein 4	NM_009300|Svs4|20941|seminal vesicle secretory protein 4
mm9_v1_chr8_-_19114830_19114832	1.01882	FOXQ1.p2	AK020311|Defb12|77674|defensin beta 12	AB089182|Defb12|77674|defensin beta 12	NM_152802|Defb12|77674|defensin beta 12
mm9_v1_chr6_+_87040212_87040221	1.01638	FOXQ1.p2	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr14_-_111154292_111154370	1.01431	FOXQ1.p2	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chrX_-_138159759_138159833	1.01085	FOXQ1.p2	BC060235|Irs4|16370|insulin receptor substrate 4	NM_010572|Irs4|16370|insulin receptor substrate 4	BC150782|Irs4|16370|insulin receptor substrate 4
mm9_v1_chr9_+_15297853_15297875	0.99869	FOXQ1.p2	AK146267|BC017612|170748|cDNA sequence BC017612
mm9_v1_chr11_+_32176599_32176641	0.99685	FOXQ1.p2	NM_010405|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex	AK077590|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex	BC051988|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex	M26898|Hba-x|15126|hemoglobin X, alpha-like embryonic chain in Hba complex
mm9_v1_chr8_+_23337748_23337837	0.993788	FOXQ1.p2	BC029898|Thsd1|56229|thrombospondin, type I, domain 1	AK049636|Thsd1|56229|thrombospondin, type I, domain 1	BC051957|Thsd1|56229|thrombospondin, type I, domain 1	AK052555|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr6_-_129863199_129863241	0.990949	FOXQ1.p2	BC120550|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	BC137708|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF247643|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	NM_008463|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	U10091|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5
mm9_v1_chr9_-_7835107_7835268	0.987909	FOXQ1.p2	BC145985|Birc2|11797|baculoviral IAP repeat-containing 2	NM_007465|Birc2|11797|baculoviral IAP repeat-containing 2	U88909|Birc2|11797|baculoviral IAP repeat-containing 2	BC033480|Birc2|11797|baculoviral IAP repeat-containing 2
mm9_v1_chr9_+_7347373_7347457	0.982905	FOXQ1.p2	NM_008605|Mmp12|17381|matrix metallopeptidase 12	AK089452|Mmp12|17381|matrix metallopeptidase 12	AK089523|Mmp12|17381|matrix metallopeptidase 12	AK090051|Mmp12|17381|matrix metallopeptidase 12	AK150596|Mmp12|17381|matrix metallopeptidase 12	AK151021|Mmp12|17381|matrix metallopeptidase 12	AK151273|Mmp12|17381|matrix metallopeptidase 12	AK151933|Mmp12|17381|matrix metallopeptidase 12	AK155743|Mmp12|17381|matrix metallopeptidase 12	AK155747|Mmp12|17381|matrix metallopeptidase 12	AK155748|Mmp12|17381|matrix metallopeptidase 12	AK155841|Mmp12|17381|matrix metallopeptidase 12	AK170360|Mmp12|17381|matrix metallopeptidase 12	AK170667|Mmp12|17381|matrix metallopeptidase 12	AK170976|Mmp12|17381|matrix metallopeptidase 12	AK171006|Mmp12|17381|matrix metallopeptidase 12	AK171036|Mmp12|17381|matrix metallopeptidase 12	AK171176|Mmp12|17381|matrix metallopeptidase 12	AK171428|Mmp12|17381|matrix metallopeptidase 12	AK171447|Mmp12|17381|matrix metallopeptidase 12	AK171448|Mmp12|17381|matrix metallopeptidase 12	AK171449|Mmp12|17381|matrix metallopeptidase 12	AK171450|Mmp12|17381|matrix metallopeptidase 12	AK171466|Mmp12|17381|matrix metallopeptidase 12	AK171468|Mmp12|17381|matrix metallopeptidase 12	AK171470|Mmp12|17381|matrix metallopeptidase 12	AK171472|Mmp12|17381|matrix metallopeptidase 12	AK171485|Mmp12|17381|matrix metallopeptidase 12	AK171518|Mmp12|17381|matrix metallopeptidase 12	AK171542|Mmp12|17381|matrix metallopeptidase 12	AK171570|Mmp12|17381|matrix metallopeptidase 12	AK089309|Mmp12|17381|matrix metallopeptidase 12	AK155139|Mmp12|17381|matrix metallopeptidase 12	AK155865|Mmp12|17381|matrix metallopeptidase 12	AK170364|Mmp12|17381|matrix metallopeptidase 12	AK170798|Mmp12|17381|matrix metallopeptidase 12	AK170804|Mmp12|17381|matrix metallopeptidase 12	AK171032|Mmp12|17381|matrix metallopeptidase 12	AK171435|Mmp12|17381|matrix metallopeptidase 12	AK089295|Mmp12|17381|matrix metallopeptidase 12	AK089335|Mmp12|17381|matrix metallopeptidase 12	BC019135|Mmp12|17381|matrix metallopeptidase 12	CT010377|Mmp12|17381|matrix metallopeptidase 12	M82831|Mmp12|17381|matrix metallopeptidase 12
mm9_v1_chr17_+_47928985_47929151	0.98025	FOXQ1.p2	
mm9_v1_chr16_-_91069378_91069389	0.978958	FOXQ1.p2	AK035767|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	AK043035|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	AK016554|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	NM_001163695|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene	NM_028905|4932438H23Rik|74387|RIKEN cDNA 4932438H23 gene
mm9_v1_chr14_+_103912557_103912637	0.970198	FOXQ1.p2	NM_022886|Scel|64929|sciellin	AF245700|Scel|64929|sciellin	BC025142|Scel|64929|sciellin	BC112380|Scel|64929|sciellin	AK020346|Scel|64929|sciellin	BC111874|Scel|64929|sciellin
mm9_v1_chr16_-_84955086_84955166	0.969603	FOXQ1.p2	AK190928|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr19_+_29141804_29141836	0.967791	FOXQ1.p2	AK028012|Gm9895|433237|predicted gene 9895
mm9_v1_chr2_-_87332571_87332574	0.967165	FOXQ1.p2	BC052825|Pramel7|347712|preferentially expressed antigen in melanoma like 7	AF490343|Pramel7|347712|preferentially expressed antigen in melanoma like 7	NM_178250|Pramel7|347712|preferentially expressed antigen in melanoma like 7
mm9_v1_chr5_+_32761610_32761706	0.966956	FOXQ1.p2	AK004686|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	M27073|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK160743|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	BC046832|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168512|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK088893|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr5_-_121337533_121337629	0.966626	FOXQ1.p2	X58077|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	BC018470|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	AF480417|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	NM_011852|Oas1g|23960|2'-5' oligoadenylate synthetase 1G	BC043339|Oas1g|23960|2'-5' oligoadenylate synthetase 1G
mm9_v1_chr2_-_7002287_7002310	0.964619	FOXQ1.p2	AK137292|Celf2|14007|CUGBP, Elav-like family member 2	AK164914|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr7_+_120909509_120909519	0.962698	FOXQ1.p2	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr8_+_70014656_70014656	0.958698	FOXQ1.p2	NM_008673|Nat1|17960|N-acetyl transferase 1	U35885|Nat1|17960|N-acetyl transferase 1
mm9_v1_chr11_-_109957250_109957250	0.950665	FOXQ1.p2	NM_153145|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a
mm9_v1_chr19_+_26822892_26822948	0.945891	FOXQ1.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr9_+_106091656_106091698	0.945737	FOXQ1.p2	BC054453|Wdr82|77305|WD repeat domain containing 82	BC112907|Wdr82|77305|WD repeat domain containing 82	BC044669|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr12_-_86097486_86097537	0.943245	FOXQ1.p2	
mm9_v1_chr9_-_39066263_39066264	0.942494	FOXQ1.p2	NM_146506|Olfr945|258499|olfactory receptor 945	BC128004|Olfr945|258499|olfactory receptor 945
mm9_v1_chr4_+_125701902_125702025	0.939571	FOXQ1.p2	AK144318|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	NM_007782|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	AK089305|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	M58288|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC115865|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC116635|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)
mm9_v1_chr12_-_74147698_74147707	0.939091	FOXQ1.p2	AK131925|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	NM_009189|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)	AK144753|Six1|20471|sine oculis-related homeobox 1 homolog (Drosophila)
mm9_v1_chr10_-_88067758_88067896	0.937244	FOXQ1.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr17_-_36248574_36248638	0.936524	FOXQ1.p2	AF100703|H2-T23|15040|histocompatibility 2, T region locus 23	AF041855|H2-T23|15040|histocompatibility 2, T region locus 23	L00606|H2-T23|15040|histocompatibility 2, T region locus 23	BC005648|H2-T23|15040|histocompatibility 2, T region locus 23	AK083376|C920025E04Rik|667803|RIKEN cDNA C920025E04 gene	AK083387|C920025E04Rik|667803|RIKEN cDNA C920025E04 gene
mm9_v1_chr11_-_86331141_86331142	0.933815	FOXQ1.p2	AK012045|Rps6kb1|72508|ribosomal protein S6 kinase, polypeptide 1
mm9_v1_chr9_+_7445821_7445879	0.929479	FOXQ1.p2	NM_010809|Mmp3|17392|matrix metallopeptidase 3	X63162|Mmp3|17392|matrix metallopeptidase 3	AK148467|Mmp3|17392|matrix metallopeptidase 3	BC006725|Mmp3|17392|matrix metallopeptidase 3	X66402|Mmp3|17392|matrix metallopeptidase 3
mm9_v1_chr1_-_157881946_157881946	0.929025	FOXQ1.p2	NM_001160019|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr11_+_44431601_44431727	0.926871	FOXQ1.p2	AK141175|Ebf1|13591|early B-cell factor 1	AK051438|Ebf1|13591|early B-cell factor 1	AK139021|Ebf1|13591|early B-cell factor 1	AK031239|Ebf1|13591|early B-cell factor 1	L12147|Ebf1|13591|early B-cell factor 1	NM_007897|Ebf1|13591|early B-cell factor 1	BC139362|Ebf1|13591|early B-cell factor 1	BC139364|Ebf1|13591|early B-cell factor 1	AK137389|Ebf1|13591|early B-cell factor 1	AK035781|Ebf1|13591|early B-cell factor 1
mm9_v1_chr13_-_32873647_32873647	0.925623	FOXQ1.p2	NM_001166030|Mylk4|238564|myosin light chain kinase family, member 4
mm9_v1_chr2_+_152495196_152495240	0.923455	FOXQ1.p2	NM_001159551|H13|14950|histocompatibility 13	NM_001159552|H13|14950|histocompatibility 13	NM_001159553|H13|14950|histocompatibility 13	NM_010376|H13|14950|histocompatibility 13	AJ345032|H13|14950|histocompatibility 13	BC056977|H13|14950|histocompatibility 13	DQ168449|H13|14950|histocompatibility 13	AK012600|H13|14950|histocompatibility 13	AK007664|H13|14950|histocompatibility 13	AK004690|H13|14950|histocompatibility 13	AK019877|H13|14950|histocompatibility 13	AK039008|H13|14950|histocompatibility 13	AK049101|H13|14950|histocompatibility 13	AK159176|H13|14950|histocompatibility 13	AK028109|H13|14950|histocompatibility 13	AF483214|H13|14950|histocompatibility 13	AK080966|H13|14950|histocompatibility 13	AK169922|H13|14950|histocompatibility 13
mm9_v1_chr1_-_88008483_88008544	0.917406	FOXQ1.p2	BC023690|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	AK033713|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	NM_008311|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B
mm9_v1_chr10_-_33847745_33847787	0.915733	FOXQ1.p2	AK153519|Fam26f|215900|family with sequence similarity 26, member F	AK042270|Fam26f|215900|family with sequence similarity 26, member F	NM_175449|Fam26f|215900|family with sequence similarity 26, member F	BC095946|Fam26f|215900|family with sequence similarity 26, member F
mm9_v1_chr1_+_174405490_174405627	0.915239	FOXQ1.p2	NM_029612|Slamf9|98365|SLAM family member 9	AK090041|Slamf9|98365|SLAM family member 9	AK009505|Slamf9|98365|SLAM family member 9	BC019477|Slamf9|98365|SLAM family member 9	AB196824|Slamf9|98365|SLAM family member 9	AB196825|Slamf9|98365|SLAM family member 9	AB196826|Slamf9|98365|SLAM family member 9	AB196827|Slamf9|98365|SLAM family member 9
mm9_v1_chrX_-_98929396_98929485	0.910057	FOXQ1.p2	AF045146|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	BC096626|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	AB003174|Cxcr3|12766|chemokine (C-X-C motif) receptor 3	NM_009910|Cxcr3|12766|chemokine (C-X-C motif) receptor 3
mm9_v1_chr1_-_16093257_16093367	0.909692	FOXQ1.p2	
mm9_v1_chr2_-_7317513_7317626	0.908549	FOXQ1.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr18_-_65553541_65553541	0.907588	FOXQ1.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr2_-_26314921_26314925	0.90599	FOXQ1.p2	AK079454|Notch1|18128|Notch gene homolog 1 (Drosophila)
mm9_v1_chr6_-_101266541_101266557	0.905618	FOXQ1.p2	AK020657|9530086O07Rik|78741|RIKEN cDNA 9530086O07 gene
mm9_v1_chr5_-_92776160_92776261	0.902556	FOXQ1.p2	AK152838|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chrX_+_91969907_91969907	0.89249	FOXQ1.p2	NM_001081473|Zxdb|668166|zinc finger, X-linked, duplicated B
mm9_v1_chr2_-_102741661_102741678	0.890451	FOXQ1.p2	AK045226|Cd44|12505|CD44 antigen
mm9_v1_chr8_+_46970860_46970893	0.889332	FOXQ1.p2	AK016447|Pdlim3|53318|PDZ and LIM domain 3	BC070418|Pdlim3|53318|PDZ and LIM domain 3
mm9_v1_chr15_-_103085703_103085858	0.889192	FOXQ1.p2	BC062171|Nfe2|18022|nuclear factor, erythroid derived 2	NM_008685|Nfe2|18022|nuclear factor, erythroid derived 2	L09600|Nfe2|18022|nuclear factor, erythroid derived 2
mm9_v1_chr5_-_24781987_24782111	0.888365	FOXQ1.p2	AK077567|Mll3|231051|myeloid/lymphoid or mixed-lineage leukemia 3
mm9_v1_chr6_-_16848314_16848325	0.887815	FOXQ1.p2	BC098494|Tcfec|21426|transcription factor EC
mm9_v1_chr2_+_69561103_69561149	0.887099	FOXQ1.p2	AK135178|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC150694|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK134121|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	NM_001081086|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	BC027420|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr10_+_26492282_26492396	0.884401	FOXQ1.p2	BC030858|Arhgap18|73910|Rho GTPase activating protein 18	NM_176837|Arhgap18|73910|Rho GTPase activating protein 18	AK087800|Arhgap18|73910|Rho GTPase activating protein 18	AK014728|Arhgap18|73910|Rho GTPase activating protein 18
mm9_v1_chr13_+_27213566_27213578	0.881616	FOXQ1.p2	BC064735|Prl3d2|215028|prolactin family 3, subfamily d, member 1	AF525160|Prl3d2|215028|prolactin family 3, subfamily d, member 1	NM_172155|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119340|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119344|Prl3d2|215028|prolactin family 3, subfamily d, member 1
mm9_v1_chr17_+_31814873_31814975	0.878822	FOXQ1.p2	AK143463|Cryaa|12954|crystallin, alpha A	BC085170|Cryaa|12954|crystallin, alpha A	BC085172|Cryaa|12954|crystallin, alpha A	NM_013501|Cryaa|12954|crystallin, alpha A	AJ310308|Cryaa|12954|crystallin, alpha A	BC092385|Cryaa|12954|crystallin, alpha A	J00376|Cryaa|12954|crystallin, alpha A
mm9_v1_chr2_-_163470826_163470836	0.873649	FOXQ1.p2	BC011295|Serinc3|26943|serine incorporator 3
mm9_v1_chr13_-_27872632_27872672	0.872753	FOXQ1.p2	BC099442|Prl7c1|67505|prolactin family 7, subfamily c, member 1	AK014436|Prl7c1|67505|prolactin family 7, subfamily c, member 1	AF525157|Prl7c1|67505|prolactin family 7, subfamily c, member 1	AK005486|Prl7c1|67505|prolactin family 7, subfamily c, member 1	NM_026206|Prl7c1|67505|prolactin family 7, subfamily c, member 1
mm9_v1_chr12_-_85791897_85791926	0.869168	FOXQ1.p2	AF297860|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	NM_134042|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK164366|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK033587|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr4_-_87452140_87452217	0.865614	FOXQ1.p2	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr11_-_21222127_21222131	0.865161	FOXQ1.p2	AK177417|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr9_-_35651734_35651734	0.863214	FOXQ1.p2	AK020329|9230110F15Rik|77080|RIKEN cDNA 9230110F15 gene	NM_029863|9230110F15Rik|77080|RIKEN cDNA 9230110F15 gene
mm9_v1_chr15_+_61817102_61817119	0.861005	FOXQ1.p2	AK087961|Myc|17869|myelocytomatosis oncogene	AK133952|Myc|17869|myelocytomatosis oncogene
mm9_v1_chr12_-_101963226_101963268	0.859094	FOXQ1.p2	AY341873|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	AY341881|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	BC035298|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	NM_153587|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5
mm9_v1_chr6_-_118089060_118089172	0.857879	FOXQ1.p2	AK028045|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK145992|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK160867|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK019496|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	NM_030165|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2
mm9_v1_chr6_+_122463663_122463700	0.856965	FOXQ1.p2	AK003479|Mfap5|50530|microfibrillar associated protein 5	AF180805|Mfap5|50530|microfibrillar associated protein 5	NM_015776|Mfap5|50530|microfibrillar associated protein 5	BC025131|Mfap5|50530|microfibrillar associated protein 5
mm9_v1_chr18_-_60908267_60908331	0.856915	FOXQ1.p2	AK147282|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AK035642|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr5_+_140019846_140019918	0.855694	FOXQ1.p2	AK082472|Uncx|22255|UNC homeobox	NM_013702|Uncx|22255|UNC homeobox	AF247550|Uncx|22255|UNC homeobox	Z96107|Uncx|22255|UNC homeobox	BC051973|Uncx|22255|UNC homeobox	AJ001116|Uncx|22255|UNC homeobox	S83543|Uncx|22255|UNC homeobox
mm9_v1_chr16_-_92826239_92826287	0.855397	FOXQ1.p2	BC069929|Runx1|12394|runt related transcription factor 1	AK137493|Runx1|12394|runt related transcription factor 1
mm9_v1_chr3_-_64311606_64311606	0.85429	FOXQ1.p2	NM_001104618|Vmn2r5|667060|vomeronasal 2, receptor 5
mm9_v1_chr10_+_41250456_41250646	0.854074	FOXQ1.p2	AK217133|Cd164|53599|CD164 antigen	AK135616|Cd164|53599|CD164 antigen
mm9_v1_chrX_+_97710893_97711108	0.852249	FOXQ1.p2	AK218313|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK210875|Igbp1|18518|immunoglobulin (CD79A) binding protein 1
mm9_v1_chr1_-_175157322_175157359	0.852073	FOXQ1.p2	BC125457|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC125455|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC145138|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	J05018|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	NM_010184|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide
mm9_v1_chr13_-_104623606_104623708	0.851636	FOXQ1.p2	BC005691|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr11_+_106889431_106889676	0.848848	FOXQ1.p2	AK007422|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	NM_001163473|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC124997|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene	BC125006|1810010H24Rik|69066|RIKEN cDNA 1810010H24 gene
mm9_v1_chr7_-_54744926_54744955	0.846328	FOXQ1.p2	BC064040|Mrgpra2a|668727|MAS-related GPR, member A2A	NM_153101|Mrgpra2b|235712|MAS-related GPR, member A2B	AK156116|Mrgpra2b|235712|MAS-related GPR, member A2B
mm9_v1_chr2_-_163450863_163450871	0.845782	FOXQ1.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr2_-_39081799_39081884	0.843048	FOXQ1.p2	AK002764|Ppp6c|67857|protein phosphatase 6, catalytic subunit	AK009104|Ppp6c|67857|protein phosphatase 6, catalytic subunit	NM_024209|Ppp6c|67857|protein phosphatase 6, catalytic subunit	BC002223|Ppp6c|67857|protein phosphatase 6, catalytic subunit
mm9_v1_chr9_-_35936363_35936363	0.840044	FOXQ1.p2	NM_001167587|Gm5916|546123|predicted gene 5916
mm9_v1_chr19_-_34953614_34953632	0.839951	FOXQ1.p2	AK050799|Pank1|75735|pantothenate kinase 1
mm9_v1_chr6_+_54839147_54839273	0.839232	FOXQ1.p2	AK078666|Znrf2|387524|zinc and ring finger 2
mm9_v1_chr18_-_60751369_60751441	0.838978	FOXQ1.p2	BC104046|Myoz3|170947|myozenin 3	BC104047|Myoz3|170947|myozenin 3	NM_133363|Myoz3|170947|myozenin 3	AF480442|Myoz3|170947|myozenin 3
mm9_v1_chr13_+_49678115_49678143	0.836784	FOXQ1.p2	AB007848|Omd|27047|osteomodulin	NM_012050|Omd|27047|osteomodulin	BC095997|Omd|27047|osteomodulin
mm9_v1_chr10_-_5734448_5734544	0.83623	FOXQ1.p2	EU791538|Esr1|13982|estrogen receptor 1 (alpha)	AK036627|Esr1|13982|estrogen receptor 1 (alpha)	NM_007956|Esr1|13982|estrogen receptor 1 (alpha)	AJ272164|Esr1|13982|estrogen receptor 1 (alpha)	AK039911|Esr1|13982|estrogen receptor 1 (alpha)	AK041525|Esr1|13982|estrogen receptor 1 (alpha)	AK033270|Esr1|13982|estrogen receptor 1 (alpha)
mm9_v1_chr10_-_13043959_13044096	0.835589	FOXQ1.p2	BC130264|Phactr2|215789|phosphatase and actin regulator 2	AK142930|Phactr2|215789|phosphatase and actin regulator 2	NM_001033257|Phactr2|215789|phosphatase and actin regulator 2	NM_001195096|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr6_+_143156520_143156614	0.832836	FOXQ1.p2	AK004338|Etnk1|75320|ethanolamine kinase 1
mm9_v1_chrM_-_13886_13905	0.832206	FOXQ1.p2	
mm9_v1_chr15_-_98313113_98313113	0.831798	FOXQ1.p2	BC006922|Lalba|16770|lactalbumin, alpha	BC069916|Lalba|16770|lactalbumin, alpha	M80909|Lalba|16770|lactalbumin, alpha	NM_010679|Lalba|16770|lactalbumin, alpha
mm9_v1_chr4_-_150421459_150421590	0.830715	FOXQ1.p2	
mm9_v1_chr12_+_113917038_113917088	0.830101	FOXQ1.p2	BC046387|Zbtb42|382639|zinc finger and BTB domain containing 42	NM_001100460|Zbtb42|382639|zinc finger and BTB domain containing 42
mm9_v1_chr12_-_85791928_85791966	0.828937	FOXQ1.p2	AK128924|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK169915|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171896|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK155814|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK170305|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK082790|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK147146|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1	AK171581|Aldh6a1|104776|aldehyde dehydrogenase family 6, subfamily A1
mm9_v1_chr2_+_139319648_139319745	0.823802	FOXQ1.p2	AK054240|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078686|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	NM_175467|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3	AK078679|Sptlc3|228677|serine palmitoyltransferase, long chain base subunit 3
mm9_v1_chr5_+_8046077_8046128	0.822921	FOXQ1.p2	AK008783|Sri|109552|sorcin	NM_025618|Sri|109552|sorcin	AK008404|Sri|109552|sorcin	AK008970|Sri|109552|sorcin
mm9_v1_chr10_-_62666659_62666699	0.821819	FOXQ1.p2	AK036458|Mypn|68802|myopalladin	AK220521|Mypn|68802|myopalladin	NM_182992|Mypn|68802|myopalladin
mm9_v1_chr1_+_24685377_24685468	0.821014	FOXQ1.p2	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr2_-_118554094_118554175	0.820828	FOXQ1.p2	BC145249|Plcb2|18796|phospholipase C, beta 2	AK045469|Plcb2|18796|phospholipase C, beta 2	NM_177568|Plcb2|18796|phospholipase C, beta 2
mm9_v1_chr7_+_28856254_28856254	0.817691	FOXQ1.p2	AK077773|Fcgbp|215384|Fc fragment of IgG binding protein	NM_001122603|Fcgbp|215384|Fc fragment of IgG binding protein
mm9_v1_chr3_-_93858806_93858806	0.817182	FOXQ1.p2	AK033449|Gm9125|668359|predicted gene 9125	NM_001163730|Gm9125|668359|predicted gene 9125
mm9_v1_chr15_-_58046428_58046480	0.809054	FOXQ1.p2	AK014793|Fbxo32|67731|F-box protein 32	NM_026346|Fbxo32|67731|F-box protein 32	AF441120|Fbxo32|67731|F-box protein 32
mm9_v1_chr15_-_72926936_72926959	0.808768	FOXQ1.p2	AK003962|1110029L17Rik|68722|RIKEN cDNA 1110029L17 gene
mm9_v1_chr6_-_129826635_129826689	0.806742	FOXQ1.p2	BC132236|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AB033769|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	AK080021|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17	NM_133203|Klra17|170733|killer cell lectin-like receptor, subfamily A, member 17
mm9_v1_chr9_-_113562893_113563007	0.800852	FOXQ1.p2	AK035750|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK086540|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK157704|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr12_-_70260137_70260172	0.797222	FOXQ1.p2	NM_009093|Rps29|20090|ribosomal protein S29
mm9_v1_chr17_+_41097513_41097693	0.793256	FOXQ1.p2	AK029425|Mut|17850|methylmalonyl-Coenzyme A mutase	AK012766|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr3_+_59885811_59885831	0.79024	FOXQ1.p2	BC096665|Sucnr1|84112|succinate receptor 1
mm9_v1_chr3_-_143868114_143868170	0.787212	FOXQ1.p2	AK033097|Lmo4|16911|LIM domain only 4	AK159590|Lmo4|16911|LIM domain only 4
mm9_v1_chr4_-_4004640_4004660	0.784051	FOXQ1.p2	AK076465|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	BC125450|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	BC125452|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6	NM_001080710|Sdr16c6|242286|short chain dehydrogenase/reductase family 16C, member 6
mm9_v1_chr12_-_16596537_16596561	0.782338	FOXQ1.p2	AK141489|Lpin1|14245|lipin 1	AF180471|Lpin1|14245|lipin 1
mm9_v1_chr5_-_122020680_122020739	0.779928	FOXQ1.p2	AK184586|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK189526|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial	AK188389|Aldh2|11669|aldehyde dehydrogenase 2, mitochondrial
mm9_v1_chr9_-_107516538_107516684	0.778647	FOXQ1.p2	
mm9_v1_chr10_-_4752710_4752812	0.777237	FOXQ1.p2	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr7_+_97177668_97177676	0.774274	FOXQ1.p2	AK165252|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK157435|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK046045|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene
mm9_v1_chrM_+_13543_13577	0.770774	FOXQ1.p2	
mm9_v1_chr10_+_42580317_42580598	0.768957	FOXQ1.p2	NM_172938|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AF397911|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK034171|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	BC043310|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK047972|Scml4|268297|sex comb on midleg-like 4 (Drosophila)
mm9_v1_chr19_+_10788964_10788976	0.768288	FOXQ1.p2	
mm9_v1_chr1_+_133558507_133558510	0.767413	FOXQ1.p2	AK143581|Ctse|13034|cathepsin E
mm9_v1_chr4_-_109125244_109125254	0.761194	FOXQ1.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr9_-_117539030_117539030	0.76003	FOXQ1.p2	AK046197|Rbms3|207181|RNA binding motif, single stranded interacting protein	NM_001172121|Rbms3|207181|RNA binding motif, single stranded interacting protein
mm9_v1_chr11_+_68970595_68970695	0.756934	FOXQ1.p2	BC113149|Alox12b|11686|arachidonate 12-lipoxygenase, 12R type	AF059251|Alox12b|11686|arachidonate 12-lipoxygenase, 12R type
mm9_v1_chr8_-_75090050_75090196	0.756399	FOXQ1.p2	AK215124|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK217818|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK207517|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene
mm9_v1_chr10_-_117261663_117261731	0.756175	FOXQ1.p2	M79314|Rap1b|215449|RAS related protein 1b	BC147700|Rap1b|215449|RAS related protein 1b	BC147713|Rap1b|215449|RAS related protein 1b
mm9_v1_chr17_+_74898763_74898780	0.756054	FOXQ1.p2	AK086213|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr2_+_126533042_126533178	0.755512	FOXQ1.p2	AK166540|Usp8|84092|ubiquitin specific peptidase 8	BC038123|Usp8|84092|ubiquitin specific peptidase 8	AK129003|Usp8|84092|ubiquitin specific peptidase 8	BC050947|Usp8|84092|ubiquitin specific peptidase 8	BC061465|Usp8|84092|ubiquitin specific peptidase 8	NM_019729|Usp8|84092|ubiquitin specific peptidase 8	BC066126|Usp8|84092|ubiquitin specific peptidase 8	AK134058|Usp8|84092|ubiquitin specific peptidase 8	AK040791|Usp8|84092|ubiquitin specific peptidase 8	AK163469|Usp8|84092|ubiquitin specific peptidase 8	AK122195|Usp8|84092|ubiquitin specific peptidase 8	AK153015|Usp8|84092|ubiquitin specific peptidase 8
mm9_v1_chr2_+_76244603_76244617	0.754612	FOXQ1.p2	AK037703|Osbpl6|99031|oxysterol binding protein-like 6	AK157944|Osbpl6|99031|oxysterol binding protein-like 6	AK220498|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr1_+_152166546_152166560	0.751826	FOXQ1.p2	AK020798|Pdc|20028|phosducin	L08075|Pdc|20028|phosducin	NM_001159730|Pdc|20028|phosducin	NM_024458|Pdc|20028|phosducin	BC021920|Pdc|20028|phosducin	BC037176|Pdc|20028|phosducin	BC012507|Pdc|20028|phosducin
mm9_v1_chr13_-_67738689_67738740	0.746438	FOXQ1.p2	AK138962|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene	NM_183146|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene	BC098180|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene	AK040978|A530054K11Rik|212281|RIKEN cDNA A530054K11 gene
mm9_v1_chr2_+_69560922_69560938	0.74299	FOXQ1.p2	AK088007|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr15_-_103395483_103395508	0.742471	FOXQ1.p2	M93428|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145548|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145832|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145858|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC031931|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	AK021358|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	NM_008134|Glycam1|14663|glycosylation dependent cell adhesion molecule 1
mm9_v1_chr11_+_96184439_96184443	0.740526	FOXQ1.p2	NM_001079869|Hoxb3|15410|homeobox B3	S35738|Hoxb3|15410|homeobox B3
mm9_v1_chr2_-_23904343_23904369	0.739745	FOXQ1.p2	AB444950|Hnmt|140483|histamine N-methyltransferase	AB444951|Hnmt|140483|histamine N-methyltransferase	AK160131|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr16_-_95680888_95680987	0.736005	FOXQ1.p2	AK142379|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm9_v1_chr16_+_36914313_36914320	0.734585	FOXQ1.p2	AK220188|Golgb1|224139|golgi autoantigen, golgin subfamily b, macrogolgin 1
mm9_v1_chr18_+_44540137_44540241	0.734497	FOXQ1.p2	AK153105|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_027490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK008609|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK017809|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK166560|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK010490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK152160|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153264|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153310|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)
mm9_v1_chr3_+_79689897_79689949	0.733684	FOXQ1.p2	AF285091|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chr10_-_14438019_14438019	0.732475	FOXQ1.p2	AK018698|Gje1|76743|gap junction protein, epsilon 1	NM_029722|Gje1|76743|gap junction protein, epsilon 1
mm9_v1_chr17_+_24873606_24873638	0.729373	FOXQ1.p2	AF195142|Sepx1|27361|selenoprotein X 1	BC141146|Sepx1|27361|selenoprotein X 1	AK002339|Sepx1|27361|selenoprotein X 1	AK002652|Sepx1|27361|selenoprotein X 1	AK003112|Sepx1|27361|selenoprotein X 1	AK003624|Sepx1|27361|selenoprotein X 1
mm9_v1_chr16_-_89048013_89048143	0.728218	FOXQ1.p2	AF345293|Krtap16-10|71369|keratin associated protein 16-10	BC132612|Krtap16-8|68484|keratin associated protein 16-8	AF345298|Krtap16-8|68484|keratin associated protein 16-8	BC059086|Krtap16-8|68484|keratin associated protein 16-8	AK003281|Krtap16-8|68484|keratin associated protein 16-8	NM_130856|Krtap16-8|68484|keratin associated protein 16-8
mm9_v1_chr10_+_5151833_5151833	0.72716	FOXQ1.p2	AK041626|Syne1|64009|synaptic nuclear envelope 1	NM_001079686|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr12_+_25741653_25741728	0.726171	FOXQ1.p2	BC059030|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr14_-_37690597_37690679	0.725541	FOXQ1.p2	AK084686|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr17_-_36779586_36779610	0.724449	FOXQ1.p2	BC106996|H2-M9|14997|histocompatibility 2, M region locus 9	AF469488|H2-M9|14997|histocompatibility 2, M region locus 9	AF539595|H2-M9|14997|histocompatibility 2, M region locus 9	NM_008205|H2-M9|14997|histocompatibility 2, M region locus 9	AK080256|H2-M9|14997|histocompatibility 2, M region locus 9
mm9_v1_chr2_-_51828440_51828551	0.720428	FOXQ1.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr11_-_115884712_115884736	0.719109	FOXQ1.p2	AK213191|H3f3b|15081|H3 histone, family 3B
mm9_v1_chr15_-_37162895_37162925	0.718242	FOXQ1.p2	AK005410|Gm16136|100379659|predicted gene 16136
mm9_v1_chr4_+_135315629_135315629	0.715794	FOXQ1.p2	NM_001085509|Myom3|242702|myomesin family, member 3
mm9_v1_chr10_-_126532862_126532974	0.714638	FOXQ1.p2	
mm9_v1_chr17_-_34764041_34764054	0.708648	FOXQ1.p2	BC013462|Ppt2|54397|palmitoyl-protein thioesterase 2	NM_019441|Ppt2|54397|palmitoyl-protein thioesterase 2
mm9_v1_chr4_-_86315874_86315968	0.708264	FOXQ1.p2	BC054766|Plin2|11520|perilipin 2	AK152896|Plin2|11520|perilipin 2	BC047124|Plin2|11520|perilipin 2	AK152263|Plin2|11520|perilipin 2	AK090277|Plin2|11520|perilipin 2	AK002911|Plin2|11520|perilipin 2	AK150177|Plin2|11520|perilipin 2	AK152081|Plin2|11520|perilipin 2	AK152877|Plin2|11520|perilipin 2	AK154582|Plin2|11520|perilipin 2	M93275|Plin2|11520|perilipin 2	AK167140|Plin2|11520|perilipin 2	AK153222|Plin2|11520|perilipin 2	AK152982|Plin2|11520|perilipin 2	NM_007408|Plin2|11520|perilipin 2
mm9_v1_chr11_+_100931369_100931476	0.707365	FOXQ1.p2	AK143546|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	NM_013792|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK170758|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK158045|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK164125|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	BC055733|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	U85247|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr2_-_27118325_27118417	0.705897	FOXQ1.p2	AK012893|Vav2|22325|vav 2 oncogene	BC025845|Vav2|22325|vav 2 oncogene
mm9_v1_chr6_+_38542722_38542769	0.704579	FOXQ1.p2	BC002314|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr12_-_16596573_16596578	0.702423	FOXQ1.p2	AK030921|Lpin1|14245|lipin 1	NM_001130412|Lpin1|14245|lipin 1	NM_015763|Lpin1|14245|lipin 1	NM_172950|Lpin1|14245|lipin 1
mm9_v1_chr9_-_71743854_71743929	0.699767	FOXQ1.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chr18_+_25224729_25224737	0.69467	FOXQ1.p2	BC060607|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr10_+_57786213_57786415	0.693411	FOXQ1.p2	AK014954|Lims1|110829|LIM and senescent cell antigen-like domains 1	NM_026148|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK088939|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK153346|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151235|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151938|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK152679|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK082932|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC005621|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC067393|Lims1|110829|LIM and senescent cell antigen-like domains 1
mm9_v1_chr5_-_124053691_124053818	0.692283	FOXQ1.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr6_-_131197295_131197381	0.691302	FOXQ1.p2	U10304|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	AK017140|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	BC064711|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_001170851|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2	NM_008462|Klra2|16633|killer cell lectin-like receptor, subfamily A, member 2
mm9_v1_chr3_+_135488454_135488592	0.686682	FOXQ1.p2	AK028215|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_026228|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	AK016853|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr11_-_51414445_51414449	0.684339	FOXQ1.p2	
mm9_v1_chr15_+_83393975_83394050	0.681086	FOXQ1.p2	NM_009775|Tspo|12257|translocator protein	AK151824|Tspo|12257|translocator protein	AK153273|Tspo|12257|translocator protein	AK165822|Tspo|12257|translocator protein	AK166125|Tspo|12257|translocator protein	AK151569|Tspo|12257|translocator protein	AK156489|Tspo|12257|translocator protein	AK172384|Tspo|12257|translocator protein	AK149743|Tspo|12257|translocator protein	AK151421|Tspo|12257|translocator protein	AK152860|Tspo|12257|translocator protein	AK153159|Tspo|12257|translocator protein	AK165450|Tspo|12257|translocator protein	AK150516|Tspo|12257|translocator protein	AK152082|Tspo|12257|translocator protein	AK152827|Tspo|12257|translocator protein	BC002055|Tspo|12257|translocator protein	D21207|Tspo|12257|translocator protein
mm9_v1_chr14_+_52730577_52730615	0.681076	FOXQ1.p2	BC081545|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_001168515|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_023879|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK020800|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK044753|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY008297|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY914560|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC086692|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC016092|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1
mm9_v1_chr1_+_108757751_108757756	0.677654	FOXQ1.p2	AK136532|Serpinb5|20724|serine (or cysteine) peptidase inhibitor, clade B, member 5	BC005434|Serpinb5|20724|serine (or cysteine) peptidase inhibitor, clade B, member 5	NM_009257|Serpinb5|20724|serine (or cysteine) peptidase inhibitor, clade B, member 5
mm9_v1_chr7_-_88060541_88060574	0.676073	FOXQ1.p2	AK184425|Sec11a|56529|SEC11 homolog A (S. cerevisiae)
mm9_v1_chr15_+_99223622_99223695	0.674316	FOXQ1.p2	NM_001171035|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr7_-_139749889_139749896	0.673434	FOXQ1.p2	
mm9_v1_chr9_-_119932620_119932715	0.67282	FOXQ1.p2	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr14_-_31981750_31981759	0.670322	FOXQ1.p2	AF290914|Stab1|192187|stabilin 1	BC058607|Stab1|192187|stabilin 1
mm9_v1_chr6_-_142134669_142134673	0.669859	FOXQ1.p2	AK143970|Slco1a6|28254|solute carrier organic anion transporter family, member 1a6	NM_023718|Slco1a6|28254|solute carrier organic anion transporter family, member 1a6	AF203701|Slco1a6|28254|solute carrier organic anion transporter family, member 1a6	AF213260|Slco1a6|28254|solute carrier organic anion transporter family, member 1a6
mm9_v1_chr4_+_144482979_144483095	0.667329	FOXQ1.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr8_+_95425293_95425305	0.666971	FOXQ1.p2	NM_027112|Capns2|69543|calpain, small subunit 2	AK009171|Capns2|69543|calpain, small subunit 2
mm9_v1_chr8_-_71613058_71613120	0.665293	FOXQ1.p2	BC027192|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	BC031146|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	NM_153054|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr9_+_53109774_53109787	0.664445	FOXQ1.p2	AB098163|Exph5|320051|exophilin 5	NM_176846|Exph5|320051|exophilin 5	BC120905|Exph5|320051|exophilin 5
mm9_v1_chr12_-_52849709_52849723	0.661594	FOXQ1.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr1_+_24685711_24685764	0.657419	FOXQ1.p2	AK158982|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr10_-_78180902_78181043	0.656446	FOXQ1.p2	AJ007750|Casp14|12365|caspase 14	BC101959|Casp14|12365|caspase 14	BC101960|Casp14|12365|caspase 14	BC103555|Casp14|12365|caspase 14	BC103556|Casp14|12365|caspase 14	AK081645|Casp14|12365|caspase 14	NM_009809|Casp14|12365|caspase 14
mm9_v1_chr14_-_104243474_104243491	0.653289	FOXQ1.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr8_+_89240252_89240401	0.653185	FOXQ1.p2	AK197630|Lonp2|66887|lon peptidase 2, peroxisomal
mm9_v1_chr11_+_94812919_94812953	0.649364	FOXQ1.p2	AK159300|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr3_-_19164956_19164968	0.648948	FOXQ1.p2	U68171|Pde7a|18583|phosphodiesterase 7A	AK168957|Pde7a|18583|phosphodiesterase 7A	NM_008802|Pde7a|18583|phosphodiesterase 7A
mm9_v1_chr14_-_56704033_56704109	0.646998	FOXQ1.p2	NM_008572|Mcpt8|17231|mast cell protease 8	X78545|Mcpt8|17231|mast cell protease 8	AK136485|Mcpt8|17231|mast cell protease 8	BC120607|Mcpt8|17231|mast cell protease 8	BC119342|Mcpt8|17231|mast cell protease 8	BC144934|Mcpt8|17231|mast cell protease 8
mm9_v1_chr4_-_148524194_148524430	0.643313	FOXQ1.p2	AK198787|Pgd|110208|phosphogluconate dehydrogenase	AK208960|Pgd|110208|phosphogluconate dehydrogenase
mm9_v1_chr19_-_38117813_38117907	0.640679	FOXQ1.p2	BC150790|Myof|226101|myoferlin	AK086107|Myof|226101|myoferlin	AK173131|Myof|226101|myoferlin	AK087302|Myof|226101|myoferlin	AK031666|Myof|226101|myoferlin	AK087176|Myof|226101|myoferlin
mm9_v1_chr10_+_89280918_89280988	0.638622	FOXQ1.p2	AK079985|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK046432|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like	AK008586|Uhrf1bp1l|75089|UHRF1 (ICBP90) binding protein 1-like
mm9_v1_chr17_+_18718690_18718690	0.63756	FOXQ1.p2	NM_001104547|Vmn2r96|433070|vomeronasal 2, receptor 96
mm9_v1_chr2_+_121276592_121276724	0.637365	FOXQ1.p2	AK150949|Serf2|378702|small EDRK-rich factor 2	AK151555|Serf2|378702|small EDRK-rich factor 2	AK028362|Serf2|378702|small EDRK-rich factor 2	AK177258|Serf2|378702|small EDRK-rich factor 2	AK181677|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr12_-_114665550_114665585	0.636289	FOXQ1.p2	AK134155|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr4_-_136913576_136913662	0.635277	FOXQ1.p2	U37720|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167195|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	BC064792|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167400|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168013|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168076|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168089|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168276|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169232|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK144216|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167609|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK003098|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK075567|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK145659|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK154870|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK166281|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK051543|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151726|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168820|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK150563|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168503|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169122|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169805|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151087|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK153564|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168758|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK159470|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	NM_009861|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr7_-_97103461_97103540	0.629908	FOXQ1.p2	
mm9_v1_chr7_+_53039273_53039322	0.628286	FOXQ1.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr12_-_101963277_101963329	0.62187	FOXQ1.p2	AK032316|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5
mm9_v1_chr14_-_119076152_119076152	0.61975	FOXQ1.p2	AK052778|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	NM_001163675|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm9_v1_chr3_+_121160714_121160815	0.61943	FOXQ1.p2	AK181356|Cnn3|71994|calponin 3, acidic
mm9_v1_chr17_-_66235094_66235137	0.617315	FOXQ1.p2	NM_009067|Ralbp1|19765|ralA binding protein 1	AK138197|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr7_-_116760069_116760081	0.617222	FOXQ1.p2	BC051034|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr2_-_51828671_51828727	0.617089	FOXQ1.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr16_+_57549340_57549381	0.614161	FOXQ1.p2	AK019472|Filip1l|78749|filamin A interacting protein 1-like	NM_001177871|Filip1l|78749|filamin A interacting protein 1-like	AK132319|Filip1l|78749|filamin A interacting protein 1-like	BC024523|Filip1l|78749|filamin A interacting protein 1-like	BC062166|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr8_-_48799252_48799297	0.613447	FOXQ1.p2	AK048437|Cdkn2aip|70925|CDKN2A interacting protein	AK078329|Cdkn2aip|70925|CDKN2A interacting protein	AK167684|Cdkn2aip|70925|CDKN2A interacting protein	AK133831|Cdkn2aip|70925|CDKN2A interacting protein	NM_172407|Cdkn2aip|70925|CDKN2A interacting protein	AK035426|Cdkn2aip|70925|CDKN2A interacting protein	AK089057|Cdkn2aip|70925|CDKN2A interacting protein
mm9_v1_chr4_+_133871031_133871138	0.61274	FOXQ1.p2	NM_001039048|Trim63|433766|tripartite motif-containing 63	BC147663|Trim63|433766|tripartite motif-containing 63	BC147666|Trim63|433766|tripartite motif-containing 63	AK052911|Trim63|433766|tripartite motif-containing 63	DQ229108|Trim63|433766|tripartite motif-containing 63
mm9_v1_chr4_+_118199847_118199895	0.61049	FOXQ1.p2	AK012175|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	NM_025572|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	AK147115|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene	AK009128|2610528J11Rik|66451|RIKEN cDNA 2610528J11 gene
mm9_v1_chr4_+_129526991_129527050	0.61003	FOXQ1.p2	
mm9_v1_chr4_-_19447698_19447753	0.604897	FOXQ1.p2	BC053980|Cpne3|70568|copine III
mm9_v1_chr2_-_120862405_120862570	0.603593	FOXQ1.p2	AK158219|Epb4.2|13828|erythrocyte protein band 4.2	AK158370|Epb4.2|13828|erythrocyte protein band 4.2	AK165288|Epb4.2|13828|erythrocyte protein band 4.2	AK172410|Epb4.2|13828|erythrocyte protein band 4.2	AK158247|Epb4.2|13828|erythrocyte protein band 4.2	BC053739|Epb4.2|13828|erythrocyte protein band 4.2	AK143841|Epb4.2|13828|erythrocyte protein band 4.2	L35933|Epb4.2|13828|erythrocyte protein band 4.2	BC066194|Epb4.2|13828|erythrocyte protein band 4.2	BC066806|Epb4.2|13828|erythrocyte protein band 4.2	NM_013513|Epb4.2|13828|erythrocyte protein band 4.2	U04055|Epb4.2|13828|erythrocyte protein band 4.2	AK133896|Epb4.2|13828|erythrocyte protein band 4.2	AK137484|Epb4.2|13828|erythrocyte protein band 4.2
mm9_v1_chr3_-_93480189_93480204	0.601325	FOXQ1.p2	AF290198|Tdpoz1|207213|TD and POZ domain containing 1	NM_148949|Tdpoz1|207213|TD and POZ domain containing 1
mm9_v1_chr12_-_16596567_16596572	0.600748	FOXQ1.p2	AK154837|Lpin1|14245|lipin 1
mm9_v1_chr15_+_102839909_102840036	0.597987	FOXQ1.p2	X16511|Hoxc6|15425|homeobox C6	BC028482|Hoxc6|15425|homeobox C6	NM_010465|Hoxc6|15425|homeobox C6	BC141061|Hoxc6|15425|homeobox C6	AB221685|Hoxc6|15425|homeobox C6
mm9_v1_chr1_-_135517936_135517963	0.597586	FOXQ1.p2	AK003350|Zc3h11a|70579|zinc finger CCCH type containing 11A
mm9_v1_chrX_-_102265380_102265463	0.595401	FOXQ1.p2	AK153718|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC019699|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK017459|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085485|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085098|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084980|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC055463|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK080296|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK043766|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK047017|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084653|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK144934|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK157237|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK164650|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene
mm9_v1_chr16_-_36808790_36808790	0.593271	FOXQ1.p2	AB081298|Eaf2|106389|ELL associated factor 2	NM_001113405|Eaf2|106389|ELL associated factor 2
mm9_v1_chr5_-_72692122_72692149	0.59301	FOXQ1.p2	AK005572|Corin|53419|corin
mm9_v1_chrX_-_137077639_137077729	0.592298	FOXQ1.p2	BC028813|Tsc22d3|14605|TSC22 domain family, member 3	AF201288|Tsc22d3|14605|TSC22 domain family, member 3	AF024519|Tsc22d3|14605|TSC22 domain family, member 3	AK083389|Tsc22d3|14605|TSC22 domain family, member 3	NM_010286|Tsc22d3|14605|TSC22 domain family, member 3	AK144196|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr16_+_56075506_56075529	0.589591	FOXQ1.p2	AK040314|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003971|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003972|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003973|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_025483|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr3_-_135271247_135271409	0.587888	FOXQ1.p2	AK159423|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S66656|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	S89033|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr10_-_61441817_61441832	0.584769	FOXQ1.p2	BC034164|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr12_-_115286643_115286977	0.584018	FOXQ1.p2	M35502|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37557|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37558|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37559|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37560|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	Y00743|Igh-V11|16051|immunoglobulin heavy chain (V11 family)
mm9_v1_chr13_-_61265507_61265616	0.583976	FOXQ1.p2	AY014778|Ctsr|56835|cathepsin R	BC100338|Ctsr|56835|cathepsin R	AF245399|Ctsr|56835|cathepsin R	NM_020284|Ctsr|56835|cathepsin R	AK014432|Ctsr|56835|cathepsin R	AK005429|Ctsr|56835|cathepsin R	AY943668|Ctsr|56835|cathepsin R
mm9_v1_chr11_-_68825972_68825998	0.582024	FOXQ1.p2	
mm9_v1_chr9_-_107537602_107537678	0.58048	FOXQ1.p2	M13963|Gnai2|14678|guanine nucleotide binding protein (G protein), alpha inhibiting 2	BC037130|Gnai2|14678|guanine nucleotide binding protein (G protein), alpha inhibiting 2	BC065159|Gnai2|14678|guanine nucleotide binding protein (G protein), alpha inhibiting 2	AK167388|Gnai2|14678|guanine nucleotide binding protein (G protein), alpha inhibiting 2	NM_008138|Gnai2|14678|guanine nucleotide binding protein (G protein), alpha inhibiting 2	AK157998|Gnai2|14678|guanine nucleotide binding protein (G protein), alpha inhibiting 2	AK159222|Gnai2|14678|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm9_v1_chr4_+_144483110_144483188	0.58027	FOXQ1.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr10_+_87322774_87322795	0.580065	FOXQ1.p2	AK038119|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr16_-_76288569_76288581	0.57981	FOXQ1.p2	BC062260|Nrip1|268903|nuclear receptor interacting protein 1
mm9_v1_chr13_+_27351357_27351420	0.579325	FOXQ1.p2	AK005474|Prl3a1|67000|prolactin family 3, subfamily a, member 1	NM_025896|Prl3a1|67000|prolactin family 3, subfamily a, member 1	AK005567|Prl3a1|67000|prolactin family 3, subfamily a, member 1	AF525154|Prl3a1|67000|prolactin family 3, subfamily a, member 1	BC100334|Prl3a1|67000|prolactin family 3, subfamily a, member 1
mm9_v1_chr8_+_68142423_68142423	0.577795	FOXQ1.p2	BC066008|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_175188|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr7_+_50606710_50606917	0.573565	FOXQ1.p2	AK087658|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK155469|Siglec5|233186|sialic acid binding Ig-like lectin 5	AF293371|Siglec5|233186|sialic acid binding Ig-like lectin 5	NM_145581|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK146203|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145038|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145987|Siglec5|233186|sialic acid binding Ig-like lectin 5	AY210401|Siglec5|233186|sialic acid binding Ig-like lectin 5
mm9_v1_chr5_+_32761471_32761527	0.573008	FOXQ1.p2	AK171283|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK089067|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr8_+_123209286_123209298	0.57195	FOXQ1.p2	
mm9_v1_chr6_-_39675456_39675512	0.571135	FOXQ1.p2	AK140431|Braf|109880|Braf transforming gene	NM_139294|Braf|109880|Braf transforming gene
mm9_v1_chr14_-_31981804_31981826	0.570185	FOXQ1.p2	NM_138672|Stab1|192187|stabilin 1
mm9_v1_chr4_+_64785207_64785207	0.569235	FOXQ1.p2	NM_021362|Pappa|18491|pregnancy-associated plasma protein A
mm9_v1_chr5_+_136514365_136514365	0.569105	FOXQ1.p2	AK052525|Upk3b|100647|uroplakin 3B	NM_175309|Upk3b|100647|uroplakin 3B
mm9_v1_chrX_-_71638317_71638612	0.567998	FOXQ1.p2	BC011237|Fam3a|66294|family with sequence similarity 3, member A	AK007715|Fam3a|66294|family with sequence similarity 3, member A	NM_025473|Fam3a|66294|family with sequence similarity 3, member A	BC019752|Fam3a|66294|family with sequence similarity 3, member A	BC069871|Fam3a|66294|family with sequence similarity 3, member A
mm9_v1_chr7_+_119253816_119253899	0.567955	FOXQ1.p2	AK015683|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr6_-_41654290_41654346	0.566718	FOXQ1.p2	AK028430|Kel|23925|Kell blood group	AF252870|Kel|23925|Kell blood group	NM_032540|Kel|23925|Kell blood group
mm9_v1_chr3_-_20174589_20174650	0.565739	FOXQ1.p2	AK003061|Cpb1|76703|carboxypeptidase B1 (tissue)	BC138759|Cpb1|76703|carboxypeptidase B1 (tissue)	BC138762|Cpb1|76703|carboxypeptidase B1 (tissue)	NM_029706|Cpb1|76703|carboxypeptidase B1 (tissue)
mm9_v1_chr13_+_27893522_27893571	0.562223	FOXQ1.p2	AB032428|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF234636|Prl2a1|56635|prolactin family 2, subfamily a, member 1	NM_019991|Prl2a1|56635|prolactin family 2, subfamily a, member 1	BC099458|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AK005424|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF226610|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF272368|Prl2a1|56635|prolactin family 2, subfamily a, member 1
mm9_v1_chr9_+_92502076_92502169	0.561461	FOXQ1.p2	
mm9_v1_chr8_+_58773380_58773394	0.558961	FOXQ1.p2	AK002472|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	AK146038|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	BC021157|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)	U44389|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)
mm9_v1_chr8_-_8690519_8690552	0.558553	FOXQ1.p2	BC046971|Arglu1|234023|arginine and glutamate rich 1	NM_176849|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr1_-_156993820_156993943	0.555826	FOXQ1.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr17_-_35211408_35211444	0.555315	FOXQ1.p2	AJ315548|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	AJ315549|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	NM_033478|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	BC131988|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	BC131990|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D
mm9_v1_chr8_+_48072271_48072307	0.554818	FOXQ1.p2	AK046881|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK046797|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_177304|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079642|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079352|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK038460|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	BC096376|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm9_v1_chr15_-_94408654_94408675	0.554023	FOXQ1.p2	
mm9_v1_chr10_-_61441842_61441910	0.553464	FOXQ1.p2	NM_007731|Col13a1|12817|collagen, type XIII, alpha 1	U30292|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr17_+_5343877_5344040	0.550813	FOXQ1.p2	AK049919|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK021005|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK048918|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr11_+_78734288_78734472	0.550109	FOXQ1.p2	M87039|Nos2|18126|nitric oxide synthase 2, inducible	M92649|Nos2|18126|nitric oxide synthase 2, inducible	M84373|Nos2|18126|nitric oxide synthase 2, inducible	NM_010927|Nos2|18126|nitric oxide synthase 2, inducible	AF065919|Nos2|18126|nitric oxide synthase 2, inducible	AF065920|Nos2|18126|nitric oxide synthase 2, inducible	AF065921|Nos2|18126|nitric oxide synthase 2, inducible	BC062378|Nos2|18126|nitric oxide synthase 2, inducible	U43428|Nos2|18126|nitric oxide synthase 2, inducible
mm9_v1_chr18_+_89366818_89366986	0.548382	FOXQ1.p2	NM_001039149|Cd226|225825|CD226 antigen	NM_178687|Cd226|225825|CD226 antigen	BC132422|Cd226|225825|CD226 antigen	BC138769|Cd226|225825|CD226 antigen	BC145410|Cd226|225825|CD226 antigen	BC145411|Cd226|225825|CD226 antigen	BC051526|Cd226|225825|CD226 antigen	AK140349|Cd226|225825|CD226 antigen	AF416980|Cd226|225825|CD226 antigen	AF421198|Cd226|225825|CD226 antigen	AF421199|Cd226|225825|CD226 antigen	AF421200|Cd226|225825|CD226 antigen
mm9_v1_chr18_-_39646734_39646900	0.54691	FOXQ1.p2	AK037733|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	DQ504162|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	HM236293|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13358|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13359|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	NM_008173|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129912|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129913|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X04435|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr10_+_115254308_115254566	0.546099	FOXQ1.p2	AK087696|Tspan8|216350|tetraspanin 8	AK077301|Tspan8|216350|tetraspanin 8	BC027777|Tspan8|216350|tetraspanin 8	BC029808|Tspan8|216350|tetraspanin 8	NM_001168679|Tspan8|216350|tetraspanin 8	NM_001168680|Tspan8|216350|tetraspanin 8	NM_146010|Tspan8|216350|tetraspanin 8	BC029068|Tspan8|216350|tetraspanin 8	BC025461|Tspan8|216350|tetraspanin 8	BC034198|Tspan8|216350|tetraspanin 8
mm9_v1_chr11_+_101902822_101902904	0.545299	FOXQ1.p2	NM_001160711|Cd300lg|52685|CD300 antigen like family member G	NM_001160712|Cd300lg|52685|CD300 antigen like family member G	NM_001160713|Cd300lg|52685|CD300 antigen like family member G	NM_027987|Cd300lg|52685|CD300 antigen like family member G	AB243063|Cd300lg|52685|CD300 antigen like family member G	AB243064|Cd300lg|52685|CD300 antigen like family member G	AB243065|Cd300lg|52685|CD300 antigen like family member G	AB243066|Cd300lg|52685|CD300 antigen like family member G	AK009375|Cd300lg|52685|CD300 antigen like family member G	BC116906|Cd300lg|52685|CD300 antigen like family member G	BC119315|Cd300lg|52685|CD300 antigen like family member G	AK171982|Cd300lg|52685|CD300 antigen like family member G	AK138920|Cd300lg|52685|CD300 antigen like family member G	AY457055|Cd300lg|52685|CD300 antigen like family member G
mm9_v1_chr18_-_66129715_66129836	0.545175	FOXQ1.p2	AY264291|Cplx4|225644|complexin 4	BC016082|Cplx4|225644|complexin 4	NM_145493|Cplx4|225644|complexin 4	AK044262|Cplx4|225644|complexin 4
mm9_v1_chr18_+_68497163_68497259	0.544361	FOXQ1.p2	NM_013596|Mc5r|17203|melanocortin 5 receptor	U08354|Mc5r|17203|melanocortin 5 receptor	BC100720|Mc5r|17203|melanocortin 5 receptor	BC100721|Mc5r|17203|melanocortin 5 receptor	BC100722|Mc5r|17203|melanocortin 5 receptor	BC100723|Mc5r|17203|melanocortin 5 receptor
mm9_v1_chr6_+_88034524_88034527	0.543358	FOXQ1.p2	BC085483|Rpn1|103963|ribophorin I
mm9_v1_chr13_-_52830976_52830978	0.543183	FOXQ1.p2	AK035586|BB123696|105404|expressed sequence BB123696
mm9_v1_chr3_+_79689851_79689888	0.54136	FOXQ1.p2	NM_133187|Fam198b|68659|family with sequence similarity 198, member B
mm9_v1_chr6_+_116600624_116600775	0.540735	FOXQ1.p2	AK078806|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	AK087284|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	NM_001166580|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	NM_145980|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC031533|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC022212|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	BC058515|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene	AB024924|8430408G22Rik|213393|RIKEN cDNA 8430408G22 gene
mm9_v1_chr4_-_142718290_142718420	0.537441	FOXQ1.p2	AK136099|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr15_-_101700048_101700137	0.536845	FOXQ1.p2	BC107395|Krt77|406220|keratin 77	BC107396|Krt77|406220|keratin 77	NM_001003667|Krt77|406220|keratin 77	BC141259|Krt77|406220|keratin 77	AK132513|Krt77|406220|keratin 77
mm9_v1_chr8_+_72696276_72696336	0.534745	FOXQ1.p2	AK032711|Tmem161a|234371|transmembrane protein 161A	AK082916|Tmem161a|234371|transmembrane protein 161A	AK049979|Tmem161a|234371|transmembrane protein 161A	NM_145597|Tmem161a|234371|transmembrane protein 161A	AK082758|Tmem161a|234371|transmembrane protein 161A	AK147962|Tmem161a|234371|transmembrane protein 161A	AK088569|Tmem161a|234371|transmembrane protein 161A	AK167517|Tmem161a|234371|transmembrane protein 161A	BC021367|Tmem161a|234371|transmembrane protein 161A
mm9_v1_chr11_+_116715041_116715362	0.533393	FOXQ1.p2	BC100547|Mfsd11|69900|major facilitator superfamily domain containing 11	AK007898|Mfsd11|69900|major facilitator superfamily domain containing 11	AK032043|Mfsd11|69900|major facilitator superfamily domain containing 11	AK031384|Mfsd11|69900|major facilitator superfamily domain containing 11	BC079583|Mfsd11|69900|major facilitator superfamily domain containing 11	BC088988|Mfsd11|69900|major facilitator superfamily domain containing 11	NM_178620|Mfsd11|69900|major facilitator superfamily domain containing 11	BC145068|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137971|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137970|Mfsd11|69900|major facilitator superfamily domain containing 11	BC016209|Mfsd11|69900|major facilitator superfamily domain containing 11	AF015191|Mfsd11|69900|major facilitator superfamily domain containing 11
mm9_v1_chr1_+_94803538_94803618	0.529474	FOXQ1.p2	AK163560|Dusp28|67446|dual specificity phosphatase 28	AK002934|Dusp28|67446|dual specificity phosphatase 28	NM_175118|Dusp28|67446|dual specificity phosphatase 28	BC119127|Dusp28|67446|dual specificity phosphatase 28	BC051598|Dusp28|67446|dual specificity phosphatase 28	AK088940|Dusp28|67446|dual specificity phosphatase 28
mm9_v1_chr11_+_98667577_98667599	0.528843	FOXQ1.p2	AK031902|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chr2_-_84662710_84662808	0.528087	FOXQ1.p2	AK003989|Smtnl1|68678|smoothelin-like 1	BC002317|Smtnl1|68678|smoothelin-like 1	NM_024230|Smtnl1|68678|smoothelin-like 1
mm9_v1_chr15_+_73582208_73582380	0.526728	FOXQ1.p2	BC027445|Ptp4a3|19245|protein tyrosine phosphatase 4a3	CT010215|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK003954|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr2_+_169459145_169459258	0.526542	FOXQ1.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr8_-_122086343_122086607	0.526101	FOXQ1.p2	BC037193|Hsdl1|72552|hydroxysteroid dehydrogenase like 1	BC038480|Hsdl1|72552|hydroxysteroid dehydrogenase like 1	BC058121|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr5_+_150242274_150242293	0.524454	FOXQ1.p2	AK087319|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC120819|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144997|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144998|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144999|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	NM_029464|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK161244|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK016369|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene
mm9_v1_chr3_+_14480698_14480724	0.522873	FOXQ1.p2	AB055005|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12	AK085644|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12	NM_080852|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12	AJ417663|Slc7a12|140918|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
mm9_v1_chr11_+_72974053_72974072	0.521464	FOXQ1.p2	AK134662|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5
mm9_v1_chr13_+_24893310_24893891	0.520222	FOXQ1.p2	AK035718|BC005537|79555|cDNA sequence BC005537	NM_024473|BC005537|79555|cDNA sequence BC005537	AK078765|BC005537|79555|cDNA sequence BC005537	BC005537|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr2_+_76244578_76244594	0.518123	FOXQ1.p2	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr17_-_56419388_56419395	0.517215	FOXQ1.p2	AK003971|Plin3|66905|perilipin 3
mm9_v1_chr13_-_52830967_52830973	0.515161	FOXQ1.p2	AK035379|BB123696|105404|expressed sequence BB123696	AK035711|BB123696|105404|expressed sequence BB123696	AK035638|BB123696|105404|expressed sequence BB123696
mm9_v1_chr4_+_15211137_15211173	0.515031	FOXQ1.p2	AK162736|Tmem64|100201|transmembrane protein 64
mm9_v1_chr8_-_122099088_122099101	0.513915	FOXQ1.p2	NM_175185|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr10_-_115922360_115922443	0.513096	FOXQ1.p2	AK019295|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr2_+_74560034_74560034	0.510816	FOXQ1.p2	NM_010469|Hoxd4|15436|homeobox D4
mm9_v1_chr3_-_106022381_106022396	0.510618	FOXQ1.p2	AY049765|Chi3l4|104183|chitinase 3-like 4	AY065557|Chi3l4|104183|chitinase 3-like 4	BC130015|Chi3l4|104183|chitinase 3-like 4	AK131914|Chi3l4|104183|chitinase 3-like 4	NM_145126|Chi3l4|104183|chitinase 3-like 4
mm9_v1_chr4_-_82698070_82698070	0.509649	FOXQ1.p2	AB160986|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_001198811|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr19_-_9162377_9162448	0.509447	FOXQ1.p2	BC027518|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	AK145844|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)	NM_011681|Scgb1a1|22287|secretoglobin, family 1A, member 1 (uteroglobin)
mm9_v1_chr19_-_17912073_17912162	0.509302	FOXQ1.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr14_-_104243541_104243687	0.509192	FOXQ1.p2	BC026553|Ednrb|13618|endothelin receptor type B
mm9_v1_chr16_-_26526854_26526915	0.507942	FOXQ1.p2	AK142524|Tmem207|100043057|transmembrane protein 207	NM_001101640|Tmem207|100043057|transmembrane protein 207
mm9_v1_chr3_-_92474213_92474238	0.506436	FOXQ1.p2	BC062142|Lce1a2|73722|late cornified envelope 1A2	BC100540|Lce1a2|73722|late cornified envelope 1A2	BC147122|Lce1a2|73722|late cornified envelope 1A2	AK003412|Lce1a2|73722|late cornified envelope 1A2	NM_028625|Lce1a2|73722|late cornified envelope 1A2
mm9_v1_chr8_+_108583449_108583790	0.504074	FOXQ1.p2	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr13_+_43497279_43497424	0.503889	FOXQ1.p2	AK140839|Nol7|70078|nucleolar protein 7
mm9_v1_chr16_+_30599808_30599823	0.503184	FOXQ1.p2	AK083036|Fam43a|224093|family with sequence similarity 43, member A	NM_177632|Fam43a|224093|family with sequence similarity 43, member A	AK137950|Fam43a|224093|family with sequence similarity 43, member A	BC099947|Fam43a|224093|family with sequence similarity 43, member A
mm9_v1_chr12_+_75028976_75029036	0.502081	FOXQ1.p2	AK076395|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr3_-_75073981_75073999	0.500491	FOXQ1.p2	AF251276|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	AK007347|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	AK008931|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2	NM_026460|Serpini2|67931|serine (or cysteine) peptidase inhibitor, clade I, member 2
mm9_v1_chr9_-_76893529_76893587	0.498076	FOXQ1.p2	AF153366|Tinag|26944|tubulointerstitial nephritis antigen	BC010745|Tinag|26944|tubulointerstitial nephritis antigen	AK008374|Tinag|26944|tubulointerstitial nephritis antigen	NM_012033|Tinag|26944|tubulointerstitial nephritis antigen
mm9_v1_chr9_-_44550590_44550598	0.498042	FOXQ1.p2	
mm9_v1_chr5_+_20692068_20692169	0.497798	FOXQ1.p2	AK137494|Pion|212167|pigeon homolog (Drosophila)	BC043137|Pion|212167|pigeon homolog (Drosophila)	BC059054|Pion|212167|pigeon homolog (Drosophila)	NM_175437|Pion|212167|pigeon homolog (Drosophila)	AK033694|Pion|212167|pigeon homolog (Drosophila)	AK039306|Pion|212167|pigeon homolog (Drosophila)	AK080244|Pion|212167|pigeon homolog (Drosophila)	AK170515|Pion|212167|pigeon homolog (Drosophila)	BC022737|Pion|212167|pigeon homolog (Drosophila)	BC144952|Pion|212167|pigeon homolog (Drosophila)	BC144953|Pion|212167|pigeon homolog (Drosophila)
mm9_v1_chr12_-_74647339_74647462	0.494385	FOXQ1.p2	BC119224|Tmem30b|238257|transmembrane protein 30B	BC119226|Tmem30b|238257|transmembrane protein 30B	AK030302|Tmem30b|238257|transmembrane protein 30B	AK037246|Tmem30b|238257|transmembrane protein 30B	AK033580|Tmem30b|238257|transmembrane protein 30B	NM_178715|Tmem30b|238257|transmembrane protein 30B	AK169014|Tmem30b|238257|transmembrane protein 30B
mm9_v1_chr19_+_34682418_34682459	0.487062	FOXQ1.p2	AK150632|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK151442|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK152620|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	NM_001005858|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK077243|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene
mm9_v1_chr8_+_32239179_32239274	0.483786	FOXQ1.p2	AK004356|Rnf122|68867|ring finger protein 122
mm9_v1_chr10_+_3323355_3323355	0.482823	FOXQ1.p2	NM_001033391|Ipcef1|320495|interaction protein for cytohesin exchange factors 1
mm9_v1_chr6_+_142723841_142723893	0.481115	FOXQ1.p2	AK213220|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase
mm9_v1_chr4_-_141381906_141381921	0.48037	FOXQ1.p2	BC026552|Cela2a|13706|chymotrypsin-like elastase family, member 2A	NM_007919|Cela2a|13706|chymotrypsin-like elastase family, member 2A	X04573|Cela2a|13706|chymotrypsin-like elastase family, member 2A
mm9_v1_chr11_+_87476588_87476588	0.480026	FOXQ1.p2	AK032782|Rnf43|207742|ring finger protein 43	NM_172448|Rnf43|207742|ring finger protein 43
mm9_v1_chr17_+_35213886_35214099	0.473621	FOXQ1.p2	NM_027366|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AK009303|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	BC132420|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	BC138777|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AJ315550|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AJ315551|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E
mm9_v1_chr2_-_3283840_3283862	0.473274	FOXQ1.p2	BC025001|Olah|99035|oleoyl-ACP hydrolase	NM_145921|Olah|99035|oleoyl-ACP hydrolase	AK087571|Olah|99035|oleoyl-ACP hydrolase
mm9_v1_chr7_+_27593910_27593945	0.46851	FOXQ1.p2	BC046321|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	AK014160|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	BC058222|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	L81171|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1	NM_013809|Cyp2g1|13108|cytochrome P450, family 2, subfamily g, polypeptide 1
mm9_v1_chr2_+_74535801_74535819	0.467842	FOXQ1.p2	NM_013555|Hoxd9|15438|homeobox D9
mm9_v1_chr7_-_109636820_109636820	0.467442	FOXQ1.p2	NM_020289|Olfr544|257926|olfactory receptor 544
mm9_v1_chr15_+_61816895_61816942	0.46739	FOXQ1.p2	NM_001177352|Myc|17869|myelocytomatosis oncogene	NM_001177353|Myc|17869|myelocytomatosis oncogene	NM_001177354|Myc|17869|myelocytomatosis oncogene	NM_010849|Myc|17869|myelocytomatosis oncogene	X01023|Myc|17869|myelocytomatosis oncogene	AK145084|Myc|17869|myelocytomatosis oncogene
mm9_v1_chr1_-_166865638_166865652	0.46724	FOXQ1.p2	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr12_+_120681882_120681882	0.466476	FOXQ1.p2	NM_001163136|Macc1|238455|metastasis associated in colon cancer 1
mm9_v1_chr11_-_101087738_101087767	0.465512	FOXQ1.p2	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr19_+_53966720_53966720	0.465115	FOXQ1.p2	AK134366|Pdcd4|18569|programmed cell death 4	NM_011050|Pdcd4|18569|programmed cell death 4
mm9_v1_chr16_+_36156891_36156920	0.464785	FOXQ1.p2	AK050597|Stfa2l1|268885|stefin A2 like 1	NM_173869|Stfa2l1|268885|stefin A2 like 1	BC117052|Stfa2l1|268885|stefin A2 like 1	BC119354|Stfa2l1|268885|stefin A2 like 1	AY163161|Stfa2l1|268885|stefin A2 like 1
mm9_v1_chrX_+_35548300_35548338	0.464746	FOXQ1.p2	AK080301|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr13_+_63402580_63402599	0.464624	FOXQ1.p2	AK081363|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	AK082032|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC027288|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene
mm9_v1_chr19_-_38118066_38118066	0.464443	FOXQ1.p2	NM_001099634|Myof|226101|myoferlin
mm9_v1_chr14_-_55400722_55400814	0.463851	FOXQ1.p2	BC059004|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	NM_016972|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	AK044620|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm9_v1_chr1_-_36300951_36301026	0.460381	FOXQ1.p2	AK087883|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1	AK144381|Uggt1|320011|UDP-glucose glycoprotein glucosyltransferase 1
mm9_v1_chr6_+_41471774_41471798	0.459518	FOXQ1.p2	NM_009430|Prss2|22072|protease, serine, 2	AK003082|Prss2|22072|protease, serine, 2	X04574|Prss2|22072|protease, serine, 2	BC064796|Prss2|22072|protease, serine, 2
mm9_v1_chr14_-_51490216_51490230	0.45735	FOXQ1.p2	U86137|Tep1|21745|telomerase associated protein 1	NM_009351|Tep1|21745|telomerase associated protein 1	BC082996|Tep1|21745|telomerase associated protein 1
mm9_v1_chr17_-_66234633_66234667	0.455312	FOXQ1.p2	AK145387|Ralbp1|19765|ralA binding protein 1	BC028516|Ralbp1|19765|ralA binding protein 1	AK133613|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr17_-_34764290_34764395	0.454851	FOXQ1.p2	BC052330|Ppt2|54397|palmitoyl-protein thioesterase 2
mm9_v1_chr6_+_113408650_113408888	0.450008	FOXQ1.p2	AK169498|Il17re|57890|interleukin 17 receptor E	AK044815|Il17re|57890|interleukin 17 receptor E	BC069861|Il17re|57890|interleukin 17 receptor E	AK046713|Il17re|57890|interleukin 17 receptor E	AF458068|Il17re|57890|interleukin 17 receptor E	DQ092339|Il17re|57890|interleukin 17 receptor E	DQ092340|Il17re|57890|interleukin 17 receptor E	DQ092341|Il17re|57890|interleukin 17 receptor E	NM_001034029|Il17re|57890|interleukin 17 receptor E	NM_001034031|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr2_+_24200890_24200907	0.449542	FOXQ1.p2	AK155641|Il1rn|16181|interleukin 1 receptor antagonist	NM_001039701|Il1rn|16181|interleukin 1 receptor antagonist	AK155888|Il1rn|16181|interleukin 1 receptor antagonist	AK157157|Il1rn|16181|interleukin 1 receptor antagonist	AK171385|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr2_+_155576943_155577133	0.448233	FOXQ1.p2	NM_011171|Procr|19124|protein C receptor, endothelial	AK167302|Procr|19124|protein C receptor, endothelial	X63748|Procr|19124|protein C receptor, endothelial	L39017|Procr|19124|protein C receptor, endothelial	BC028755|Procr|19124|protein C receptor, endothelial	AK136541|Procr|19124|protein C receptor, endothelial	CT010175|Procr|19124|protein C receptor, endothelial
mm9_v1_chr6_-_52184909_52184937	0.446537	FOXQ1.p2	BC050839|Hoxa10|15395|homeobox A10	L08757|Hoxa10|15395|homeobox A10	NM_008263|Hoxa10|15395|homeobox A10
mm9_v1_chr19_+_12040311_12040373	0.445886	FOXQ1.p2	NM_001033174|Osbp|76303|oxysterol binding protein
mm9_v1_chr14_-_56402855_56402888	0.445717	FOXQ1.p2	AF442771|Adcy4|104110|adenylate cyclase 4	BC015299|Adcy4|104110|adenylate cyclase 4	NM_080435|Adcy4|104110|adenylate cyclase 4	AK161880|Adcy4|104110|adenylate cyclase 4	AK141767|Adcy4|104110|adenylate cyclase 4
mm9_v1_chr13_-_98786061_98786107	0.442403	FOXQ1.p2	AK048676|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr7_+_22880538_22880538	0.44203	FOXQ1.p2	NM_001122682|Vmn1r132|100043604|vomeronasal 1 receptor 132
mm9_v1_chr5_+_115373246_115373254	0.441704	FOXQ1.p2	AK078690|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	NM_145209|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr17_+_56752805_56752873	0.441573	FOXQ1.p2	NM_018730|Rpl36|54217|ribosomal protein L36	AK003115|Rpl36|54217|ribosomal protein L36	BC086914|Rpl36|54217|ribosomal protein L36	BC021595|Rpl36|54217|ribosomal protein L36	X75895|Rpl36|54217|ribosomal protein L36
mm9_v1_chr2_-_131000485_131000584	0.441172	FOXQ1.p2	BC006046|Spef1|70997|sperm flagellar 1	AK047675|Spef1|70997|sperm flagellar 1	NM_027641|Spef1|70997|sperm flagellar 1	AY860964|Spef1|70997|sperm flagellar 1	AK016476|Spef1|70997|sperm flagellar 1
mm9_v1_chr3_+_87973934_87974022	0.440413	FOXQ1.p2	AK032042|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr17_-_26978355_26978414	0.437837	FOXQ1.p2	BC139299|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	BC139303|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	AK142146|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chr14_-_61877218_61877326	0.436538	FOXQ1.p2	BC138960|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	BC138961|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AB024922|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AK132610|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	AF282901|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)	NM_011892|Sgcg|24053|sarcoglycan, gamma (dystrophin-associated glycoprotein)
mm9_v1_chr15_-_102019443_102019495	0.435758	FOXQ1.p2	AK005015|Csad|246277|cysteine sulfinic acid decarboxylase	NM_144942|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr10_-_127617294_127617366	0.433624	FOXQ1.p2	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr7_-_116875215_116875245	0.431937	FOXQ1.p2	AJ277605|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	AB046448|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104347|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104346|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	NM_020051|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)
mm9_v1_chr6_-_56851861_56851881	0.430148	FOXQ1.p2	BC038029|Nt5c3|107569|5'-nucleotidase, cytosolic III	AK160139|Nt5c3|107569|5'-nucleotidase, cytosolic III
mm9_v1_chr1_-_164914621_164914660	0.428376	FOXQ1.p2	NM_008030|Fmo3|14262|flavin containing monooxygenase 3	U87147|Fmo3|14262|flavin containing monooxygenase 3	AK149440|Fmo3|14262|flavin containing monooxygenase 3	AK050123|Fmo3|14262|flavin containing monooxygenase 3
mm9_v1_chr14_+_45839391_45839393	0.427762	FOXQ1.p2	AK082691|Gpr137c|70713|G protein-coupled receptor 137C	NM_027518|Gpr137c|70713|G protein-coupled receptor 137C	AK018183|Gpr137c|70713|G protein-coupled receptor 137C
mm9_v1_chr2_+_26828935_26829056	0.426192	FOXQ1.p2	AB071302|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	NM_001001322|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AK157459|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	AB112362|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13	EU034706|Adamts13|279028|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
mm9_v1_chr4_+_104830022_104830255	0.425422	FOXQ1.p2	AK160056|Ppap2b|67916|phosphatidic acid phosphatase type 2B	AK076183|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr1_-_37973274_37973337	0.424749	FOXQ1.p2	BC147562|Lyg2|332427|lysozyme G-like 2	BC147567|Lyg2|332427|lysozyme G-like 2	AK132442|Lyg2|332427|lysozyme G-like 2	NM_001033427|Lyg2|332427|lysozyme G-like 2
mm9_v1_chr12_+_60230704_60230799	0.42417	FOXQ1.p2	NM_001165254|Ctage5|217615|CTAGE family, member 5	NM_146034|Ctage5|217615|CTAGE family, member 5	AK029466|Ctage5|217615|CTAGE family, member 5	AK080312|Ctage5|217615|CTAGE family, member 5	BC026864|Ctage5|217615|CTAGE family, member 5	AK087188|Ctage5|217615|CTAGE family, member 5	AK053010|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr1_+_19093102_19093153	0.421345	FOXQ1.p2	AK132112|Tcfap2d|226896|transcription factor AP-2, delta	NM_153154|Tcfap2d|226896|transcription factor AP-2, delta	BC152324|Tcfap2d|226896|transcription factor AP-2, delta	BC152325|Tcfap2d|226896|transcription factor AP-2, delta
mm9_v1_chr19_-_7877136_7877156	0.421265	FOXQ1.p2	BC014805|BC014805|236149|cDNA sequence BC014805	NM_146232|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr8_-_122099015_122099054	0.420297	FOXQ1.p2	BC065074|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr11_+_5700192_5700309	0.420282	FOXQ1.p2	AK215440|Dbnl|13169|drebrin-like
mm9_v1_chr15_+_10930475_10930567	0.4197	FOXQ1.p2	AK029155|Slc45a2|22293|solute carrier family 45, member 2	NM_053077|Slc45a2|22293|solute carrier family 45, member 2	AK148207|Slc45a2|22293|solute carrier family 45, member 2	BC125376|Slc45a2|22293|solute carrier family 45, member 2	BC132429|Slc45a2|22293|solute carrier family 45, member 2	AK089932|Slc45a2|22293|solute carrier family 45, member 2	AY034377|Slc45a2|22293|solute carrier family 45, member 2	AF360357|Slc45a2|22293|solute carrier family 45, member 2
mm9_v1_chr1_-_4350323_4350394	0.419637	FOXQ1.p2	BC038794|Rp1|19888|retinitis pigmentosa 1 (human)	BC120927|Rp1|19888|retinitis pigmentosa 1 (human)	BC120928|Rp1|19888|retinitis pigmentosa 1 (human)	AF155141|Rp1|19888|retinitis pigmentosa 1 (human)	AK044413|Rp1|19888|retinitis pigmentosa 1 (human)	BC096607|Rp1|19888|retinitis pigmentosa 1 (human)	NM_011283|Rp1|19888|retinitis pigmentosa 1 (human)
mm9_v1_chr6_+_40443527_40443590	0.416236	FOXQ1.p2	BC116952|Tas2r108|57253|taste receptor, type 2, member 108	AY916507|Tas2r108|57253|taste receptor, type 2, member 108	NM_020502|Tas2r108|57253|taste receptor, type 2, member 108
mm9_v1_chr13_+_67295437_67295470	0.415214	FOXQ1.p2	NM_001048204|Zfp455|218311|zinc finger protein 455	AK028336|Zfp455|218311|zinc finger protein 455
mm9_v1_chr9_-_101154160_101154163	0.415174	FOXQ1.p2	NM_001161362|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr3_+_136598485_136598597	0.414801	FOXQ1.p2	AK053582|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr3_+_109376824_109376976	0.414785	FOXQ1.p2	AF140280|Vav3|57257|vav 3 oncogene	NM_146139|Vav3|57257|vav 3 oncogene	AK147053|Vav3|57257|vav 3 oncogene	BC027242|Vav3|57257|vav 3 oncogene
mm9_v1_chr2_+_164159054_164159070	0.413955	FOXQ1.p2	S60687|Svs5|20944|seminal vesicle secretory protein 5
mm9_v1_chr9_-_105999021_105999113	0.413477	FOXQ1.p2	AM231151|Col6a4|68553|collagen, type VI, alpha 4	NM_026763|Col6a4|68553|collagen, type VI, alpha 4	AB370265|Col6a4|68553|collagen, type VI, alpha 4
mm9_v1_chr19_-_31839462_31839522	0.412551	FOXQ1.p2	AK051624|Prkg1|19091|protein kinase, cGMP-dependent, type I	AK083991|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_001013833|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chr6_-_40981647_40981696	0.412234	FOXQ1.p2	AK007775|2210010C04Rik|67373|RIKEN cDNA 2210010C04 gene
mm9_v1_chr15_-_76554119_76554177	0.410754	FOXQ1.p2	AK186599|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene
mm9_v1_chr3_+_89862664_89862687	0.410122	FOXQ1.p2	BC022598|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr16_+_56075576_56075640	0.408863	FOXQ1.p2	AK012740|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK085060|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK013090|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK122542|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK010813|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164100|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK020068|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK083086|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164354|Senp7|66315|SUMO1/sentrin specific peptidase 7	BC058593|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr11_-_94154354_94154488	0.408629	FOXQ1.p2	BC055921|Luc7l3|67684|LUC7-like 3 (S. cerevisiae)
mm9_v1_chr6_+_128921177_128921181	0.405531	FOXQ1.p2	AY137341|Clec2g|70809|C-type lectin domain family 2, member g	AY137342|Clec2g|70809|C-type lectin domain family 2, member g	NM_001168223|Clec2g|70809|C-type lectin domain family 2, member g	NM_001168224|Clec2g|70809|C-type lectin domain family 2, member g	AK137753|Clec2g|70809|C-type lectin domain family 2, member g
mm9_v1_chr15_-_103140868_103140877	0.404207	FOXQ1.p2	AF272948|Gpr84|80910|G protein-coupled receptor 84	NM_030720|Gpr84|80910|G protein-coupled receptor 84	BC023249|Gpr84|80910|G protein-coupled receptor 84
mm9_v1_chr6_+_89696475_89696475	0.403256	FOXQ1.p2	NM_053230|Vmn1r41|113857|vomeronasal 1 receptor 41
mm9_v1_chr5_-_20387826_20387876	0.399893	FOXQ1.p2	AK037021|Phtf2|68770|putative homeodomain transcription factor 2	BC052841|Phtf2|68770|putative homeodomain transcription factor 2	AK042790|Phtf2|68770|putative homeodomain transcription factor 2	AK163376|Phtf2|68770|putative homeodomain transcription factor 2
mm9_v1_chr4_-_14548903_14548926	0.399823	FOXQ1.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr6_+_134870418_134870458	0.397693	FOXQ1.p2	AK047669|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	NM_009875|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK050240|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK158411|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	BC014296|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr6_+_14851348_14851478	0.397449	FOXQ1.p2	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr16_+_38362258_38362337	0.392743	FOXQ1.p2	NM_001081984|Popdc2|64082|popeye domain containing 2	BC064005|Popdc2|64082|popeye domain containing 2	NM_022318|Popdc2|64082|popeye domain containing 2	AK084713|Popdc2|64082|popeye domain containing 2	AF204175|Popdc2|64082|popeye domain containing 2
mm9_v1_chr2_+_145068346_145068346	0.391278	FOXQ1.p2	BC017615|Slc24a3|94249|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	NM_053195|Slc24a3|94249|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
mm9_v1_chr17_+_45704145_45704512	0.390819	FOXQ1.p2	AK211181|Slc35b2|73836|solute carrier family 35, member B2	AK212100|Slc35b2|73836|solute carrier family 35, member B2	AK207266|Slc35b2|73836|solute carrier family 35, member B2	AK212091|Slc35b2|73836|solute carrier family 35, member B2	AK214463|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr18_+_57628139_57628180	0.387424	FOXQ1.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr8_-_125005680_125005754	0.386603	FOXQ1.p2	
mm9_v1_chr5_-_69933835_69933870	0.38431	FOXQ1.p2	AK009405|Yipf7|75581|Yip1 domain family, member 7	BC089576|Yipf7|75581|Yip1 domain family, member 7	NM_023784|Yipf7|75581|Yip1 domain family, member 7
mm9_v1_chr17_-_26645284_26645349	0.384243	FOXQ1.p2	AK149915|Dusp1|19252|dual specificity phosphatase 1	AK159726|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr7_+_22397763_22397763	0.384202	FOXQ1.p2	NM_001122682|Vmn1r132|100043604|vomeronasal 1 receptor 132
mm9_v1_chr5_-_52541869_52541943	0.3839	FOXQ1.p2	AK208682|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr17_-_27304602_27304708	0.383417	FOXQ1.p2	BC141263|Ip6k3|271424|inositol hexaphosphate kinase 3	AK052857|Ip6k3|271424|inositol hexaphosphate kinase 3	NM_173027|Ip6k3|271424|inositol hexaphosphate kinase 3
mm9_v1_chr3_+_144955435_144955435	0.382875	FOXQ1.p2	DQ157748|Col24a1|71355|collagen, type XXIV, alpha 1	NM_027770|Col24a1|71355|collagen, type XXIV, alpha 1
mm9_v1_chr11_-_75841236_75841315	0.38276	FOXQ1.p2	AK171075|Fam101b|76566|family with sequence similarity 101, member B	AK005164|Fam101b|76566|family with sequence similarity 101, member B	NM_029658|Fam101b|76566|family with sequence similarity 101, member B
mm9_v1_chr6_-_69599335_69599382	0.382157	FOXQ1.p2	
mm9_v1_chr14_-_45839064_45839076	0.381973	FOXQ1.p2	AK039945|Txndc16|70561|thioredoxin domain containing 16	AK046466|Txndc16|70561|thioredoxin domain containing 16	NM_172597|Txndc16|70561|thioredoxin domain containing 16	BC060101|Txndc16|70561|thioredoxin domain containing 16	AK164111|Txndc16|70561|thioredoxin domain containing 16
mm9_v1_chr2_-_164705231_164705295	0.381905	FOXQ1.p2	BC037706|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene	AK142117|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene	AK015392|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene
mm9_v1_chr12_+_37040755_37040991	0.380614	FOXQ1.p2	NM_025312|Sostdc1|66042|sclerostin domain containing 1	AK002240|Sostdc1|66042|sclerostin domain containing 1	AK002396|Sostdc1|66042|sclerostin domain containing 1	AK007893|Sostdc1|66042|sclerostin domain containing 1	AK007967|Sostdc1|66042|sclerostin domain containing 1	AY255635|Sostdc1|66042|sclerostin domain containing 1	AY134666|Sostdc1|66042|sclerostin domain containing 1	BC021458|Sostdc1|66042|sclerostin domain containing 1	AB059271|Sostdc1|66042|sclerostin domain containing 1	AK007935|Sostdc1|66042|sclerostin domain containing 1
mm9_v1_chr13_+_3564316_3564379	0.379406	FOXQ1.p2	AF095728|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr11_+_46564669_46564678	0.379069	FOXQ1.p2	NM_134248|Havcr1|171283|hepatitis A virus cellular receptor 1	AF399829|Havcr1|171283|hepatitis A virus cellular receptor 1	AF399830|Havcr1|171283|hepatitis A virus cellular receptor 1
mm9_v1_chr10_+_57365674_57365674	0.378881	FOXQ1.p2	BC061162|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001039052|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001039053|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific
mm9_v1_chr13_-_74460431_74460546	0.376489	FOXQ1.p2	
mm9_v1_chr17_+_47760252_47760265	0.374398	FOXQ1.p2	AK003617|Med20|56771|mediator complex subunit 20
mm9_v1_chr3_+_85888355_85888355	0.372529	FOXQ1.p2	NM_001082414|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chr11_+_96212945_96213026	0.36993	FOXQ1.p2	NM_134032|Hoxb2|103889|homeobox B2	BC138494|Hoxb2|103889|homeobox B2	BC138495|Hoxb2|103889|homeobox B2
mm9_v1_chr15_-_96245209_96245211	0.369564	FOXQ1.p2	AK219742|Scaf11|72193|SR-related CTD-associated factor 11
mm9_v1_chr6_+_53523365_53523387	0.369176	FOXQ1.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr16_-_44558929_44559002	0.367856	FOXQ1.p2	BC078631|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	BC062892|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028889|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	NM_172506|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK043379|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein	AK028770|Boc|117606|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm9_v1_chr13_+_41744811_41744811	0.367621	FOXQ1.p2	AK037195|Gm5082|328231|predicted gene 5082	NM_177808|Gm5082|328231|predicted gene 5082
mm9_v1_chr1_-_54983132_54983204	0.366277	FOXQ1.p2	AK157584|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr4_+_140723459_140723541	0.364264	FOXQ1.p2	AK020135|Fbxo42|213499|F-box protein 42
mm9_v1_chr15_+_102840224_102840225	0.361796	FOXQ1.p2	AK050798|Hoxc6|15425|homeobox C6
mm9_v1_chr4_+_34841027_34841057	0.361675	FOXQ1.p2	NM_009889|Cga|12640|glycoprotein hormones, alpha subunit	BC087926|Cga|12640|glycoprotein hormones, alpha subunit	J00643|Cga|12640|glycoprotein hormones, alpha subunit
mm9_v1_chr4_-_144780494_144780494	0.361048	FOXQ1.p2	NM_001128198|Vps13d|230895|vacuolar protein sorting 13 D (yeast)
mm9_v1_chr13_+_49703402_49703439	0.360923	FOXQ1.p2	AK028300|Ogn|18295|osteoglycin	AK160760|Ogn|18295|osteoglycin	AK053650|Ogn|18295|osteoglycin	NM_008760|Ogn|18295|osteoglycin
mm9_v1_chr2_+_87366184_87366358	0.358951	FOXQ1.p2	BC090254|Srp9|27058|signal recognition particle 9
mm9_v1_chr10_-_24555898_24556005	0.3581	FOXQ1.p2	AY630402|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	BC117533|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	BC118512|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	BC006944|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_134005|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK132256|Enpp3|209558|ectonucleotide pyrophosphatase/phosphodiesterase 3
mm9_v1_chr8_-_122099061_122099084	0.357556	FOXQ1.p2	AK088412|Hsdl1|72552|hydroxysteroid dehydrogenase like 1
mm9_v1_chr3_-_88259682_88259708	0.356998	FOXQ1.p2	NM_013658|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr2_+_34631709_34631818	0.356122	FOXQ1.p2	AK208906|Hspa5|14828|heat shock protein 5
mm9_v1_chr17_+_28995355_28995355	0.355805	FOXQ1.p2	AK132521|Pnpla1|433091|patatin-like phospholipase domain containing 1	NM_001034885|Pnpla1|433091|patatin-like phospholipase domain containing 1
mm9_v1_chr9_-_82826139_82826181	0.355582	FOXQ1.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr2_+_34631438_34631582	0.355507	FOXQ1.p2	AK218616|Hspa5|14828|heat shock protein 5	AK186478|Hspa5|14828|heat shock protein 5	AK192310|Hspa5|14828|heat shock protein 5
mm9_v1_chr1_+_95405907_95405920	0.354511	FOXQ1.p2	
mm9_v1_chr2_+_180701948_180701963	0.352414	FOXQ1.p2	AK168007|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK168602|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr9_-_100407241_100407274	0.350706	FOXQ1.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr14_-_21553783_21553783	0.349156	FOXQ1.p2	AF520868|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2	NM_010811|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm9_v1_chr19_-_5799376_5799434	0.348606	FOXQ1.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr14_+_32021497_32021503	0.347566	FOXQ1.p2	M29793|Tnnc1|21924|troponin C, cardiac/slow skeletal	NM_009393|Tnnc1|21924|troponin C, cardiac/slow skeletal	BC061172|Tnnc1|21924|troponin C, cardiac/slow skeletal
mm9_v1_chr11_-_99855307_99855307	0.347286	FOXQ1.p2	AK020698|Krtap17-1|77914|keratin associated protein 17-1	NM_001099774|Krtap17-1|77914|keratin associated protein 17-1
mm9_v1_chr11_+_44213563_44213587	0.346012	FOXQ1.p2	AK162981|Il12b|16160|interleukin 12b	NM_008352|Il12b|16160|interleukin 12b	BC103608|Il12b|16160|interleukin 12b	BC103609|Il12b|16160|interleukin 12b	BC103610|Il12b|16160|interleukin 12b	BC103614|Il12b|16160|interleukin 12b	M86671|Il12b|16160|interleukin 12b	AF128214|Il12b|16160|interleukin 12b	AF128215|Il12b|16160|interleukin 12b
mm9_v1_chr15_-_79363346_79363346	0.343869	FOXQ1.p2	NM_152806|Ddx17|67040|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm9_v1_chr2_-_30952019_30952019	0.343742	FOXQ1.p2	AK143512|Fnbp1|14269|formin binding protein 1	NM_001177650|Fnbp1|14269|formin binding protein 1
mm9_v1_chr12_-_79944026_79944112	0.343054	FOXQ1.p2	
mm9_v1_chr7_-_55237665_55237665	0.341819	FOXQ1.p2	AY042194|Mrgpra4|235854|MAS-related GPR, member A4	NM_153524|Mrgpra4|235854|MAS-related GPR, member A4
mm9_v1_chr17_+_34056585_34056649	0.341778	FOXQ1.p2	AK077299|Tapbp|21356|TAP binding protein	AK151134|Tapbp|21356|TAP binding protein	AK169697|Tapbp|21356|TAP binding protein	AK151878|Tapbp|21356|TAP binding protein	AK152019|Tapbp|21356|TAP binding protein	AK170528|Tapbp|21356|TAP binding protein	AK151807|Tapbp|21356|TAP binding protein	BC015074|Tapbp|21356|TAP binding protein	BC052870|Tapbp|21356|TAP binding protein	AF106278|Tapbp|21356|TAP binding protein	AJ316613|Tapbp|21356|TAP binding protein	AY734471|Tapbp|21356|TAP binding protein	AY734477|Tapbp|21356|TAP binding protein	AY734468|Tapbp|21356|TAP binding protein	AY734469|Tapbp|21356|TAP binding protein
mm9_v1_chr8_-_120195414_120195414	0.340775	FOXQ1.p2	AK014586|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1	NM_028725|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1
mm9_v1_chr6_-_83456775_83456962	0.340038	FOXQ1.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr2_+_180701966_180702005	0.338213	FOXQ1.p2	BC027794|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC016228|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030295|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AJ401461|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC052922|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK089321|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK052985|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK134402|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC059817|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030520|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177706|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr11_-_99464621_99464621	0.337558	FOXQ1.p2	NM_001127354|Gm11938|100041412|predicted gene 11938
mm9_v1_chr7_-_25873560_25873562	0.336279	FOXQ1.p2	
mm9_v1_chr11_+_96143218_96143218	0.335649	FOXQ1.p2	NM_010461|Hoxb8|15416|homeobox B8	X13721|Hoxb8|15416|homeobox B8
mm9_v1_chr9_+_35259660_35259661	0.334887	FOXQ1.p2	AF090866|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	NM_021339|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes	BC109176|Cdon|57810|cell adhesion molecule-related/down-regulated by oncogenes
mm9_v1_chr19_-_7877065_7877081	0.330685	FOXQ1.p2	AJ132857|BC014805|236149|cDNA sequence BC014805
mm9_v1_chr9_+_7692089_7692096	0.330102	FOXQ1.p2	L36244|Mmp7|17393|matrix metallopeptidase 7	AK144515|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr1_+_59538966_59539075	0.328277	FOXQ1.p2	NM_008057|Fzd7|14369|frizzled homolog 7 (Drosophila)	BC063077|Fzd7|14369|frizzled homolog 7 (Drosophila)
mm9_v1_chr10_-_67599315_67599344	0.328145	FOXQ1.p2	AK162717|Arid5b|71371|AT rich interactive domain 5B (MRF1-like)
mm9_v1_chr1_+_40082070_40082114	0.326479	FOXQ1.p2	AK159799|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr5_+_104754347_104754401	0.326137	FOXQ1.p2	AF298661|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	NM_053172|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158231|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158330|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AF314964|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	BC119162|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)
mm9_v1_chr1_+_75432496_75432530	0.325094	FOXQ1.p2	NM_133708|Gmppa|69080|GDP-mannose pyrophosphorylase A	AK007463|Gmppa|69080|GDP-mannose pyrophosphorylase A
mm9_v1_chr7_+_27542160_27542205	0.323407	FOXQ1.p2	BC137965|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	BC137966|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	AK029227|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	AF047529|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19	NM_007814|Cyp2b19|13090|cytochrome P450, family 2, subfamily b, polypeptide 19
mm9_v1_chr18_-_6202199_6202203	0.322807	FOXQ1.p2	AK038217|Kif5b|16573|kinesin family member 5B
mm9_v1_chr11_-_99520272_99520272	0.321966	FOXQ1.p2	NM_001126320|Gm11563|100040248|predicted gene 11563
mm9_v1_chr10_+_120471255_120471291	0.32062	FOXQ1.p2	BC013268|Wif1|24117|Wnt inhibitory factor 1	AF122923|Wif1|24117|Wnt inhibitory factor 1
mm9_v1_chr8_+_68141935_68142010	0.320037	FOXQ1.p2	AK013582|March1|72925|membrane-associated ring finger (C3HC4) 1	NM_001166372|March1|72925|membrane-associated ring finger (C3HC4) 1	AK086052|March1|72925|membrane-associated ring finger (C3HC4) 1	AK137337|March1|72925|membrane-associated ring finger (C3HC4) 1	AK160684|March1|72925|membrane-associated ring finger (C3HC4) 1
mm9_v1_chr4_+_40895538_40895624	0.319958	FOXQ1.p2	AK147058|Chmp5|76959|chromatin modifying protein 5	BC080673|Chmp5|76959|chromatin modifying protein 5	AK008911|Chmp5|76959|chromatin modifying protein 5	NM_029814|Chmp5|76959|chromatin modifying protein 5	BC058756|Chmp5|76959|chromatin modifying protein 5	BC006947|Chmp5|76959|chromatin modifying protein 5
mm9_v1_chr7_-_4817730_4817755	0.31866	FOXQ1.p2	AK007698|Isoc2b|67441|isochorismatase domain containing 2b	BC046756|Isoc2b|67441|isochorismatase domain containing 2b
mm9_v1_chr12_+_60232417_60232447	0.317511	FOXQ1.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr4_-_141402189_141402273	0.315494	FOXQ1.p2	AK007772|Ctrc|76701|chymotrypsin C (caldecrin)	BC103715|Ctrc|76701|chymotrypsin C (caldecrin)	BC115516|Ctrc|76701|chymotrypsin C (caldecrin)	BC115517|Ctrc|76701|chymotrypsin C (caldecrin)	NM_001033875|Ctrc|76701|chymotrypsin C (caldecrin)
mm9_v1_chr5_-_66000506_66000618	0.315197	FOXQ1.p2	AK083707|B230308N11Rik|320060|RIKEN cDNA B230308N11 gene
mm9_v1_chr16_-_89420354_89420355	0.314973	FOXQ1.p2	BC116356|Krtap6-2|16701|keratin associated protein 6-2	BC116357|Krtap6-2|16701|keratin associated protein 6-2	D89902|Krtap6-2|16701|keratin associated protein 6-2	NM_010673|Krtap6-2|16701|keratin associated protein 6-2
mm9_v1_chr19_-_41288465_41288553	0.314922	FOXQ1.p2	AK077835|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr14_-_56143799_56143817	0.314875	FOXQ1.p2	AK044316|Nrl|18185|neural retina leucine zipper gene	BC031440|Nrl|18185|neural retina leucine zipper gene	NM_001136074|Nrl|18185|neural retina leucine zipper gene	AK044244|Nrl|18185|neural retina leucine zipper gene
mm9_v1_chr7_+_23197249_23197249	0.314076	FOXQ1.p2	AF324872|Vmn1r148|81011|vomeronasal 1 receptor 148	NM_030736|Vmn1r148|81011|vomeronasal 1 receptor 148
mm9_v1_chr13_-_23714425_23714427	0.313316	FOXQ1.p2	BC089600|Hist1h1e|50709|histone cluster 1, H1e	NM_015787|Hist1h1e|50709|histone cluster 1, H1e
mm9_v1_chr4_+_141000576_141000628	0.313191	FOXQ1.p2	NM_009541|Zbtb17|22642|zinc finger and BTB domain containing 17	U14556|Zbtb17|22642|zinc finger and BTB domain containing 17	AK051971|Zbtb17|22642|zinc finger and BTB domain containing 17	U22396|Zbtb17|22642|zinc finger and BTB domain containing 17	BC060055|Zbtb17|22642|zinc finger and BTB domain containing 17	AK134251|Zbtb17|22642|zinc finger and BTB domain containing 17
mm9_v1_chr7_+_109358966_109359049	0.311441	FOXQ1.p2	AK134287|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr5_-_146617411_146617451	0.3111	FOXQ1.p2	BC125522|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	AB039380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44	NM_177380|Cyp3a44|337924|cytochrome P450, family 3, subfamily a, polypeptide 44
mm9_v1_chr4_-_112447424_112447470	0.30947	FOXQ1.p2	EF494906|Skint10|230613|selection and upkeep of intraepithelial T cells 10	EF494905|Skint10|230613|selection and upkeep of intraepithelial T cells 10	AK037152|Skint10|230613|selection and upkeep of intraepithelial T cells 10	AK042291|Skint10|230613|selection and upkeep of intraepithelial T cells 10	NM_177668|Skint10|230613|selection and upkeep of intraepithelial T cells 10	AK040044|Skint10|230613|selection and upkeep of intraepithelial T cells 10
mm9_v1_chr10_-_66559568_66559740	0.308252	FOXQ1.p2	AY562231|Reep3|28193|receptor accessory protein 3	AK154559|Reep3|28193|receptor accessory protein 3	AK047728|Reep3|28193|receptor accessory protein 3	AK079649|Reep3|28193|receptor accessory protein 3	NM_178606|Reep3|28193|receptor accessory protein 3	BC004607|Reep3|28193|receptor accessory protein 3	AK008058|Reep3|28193|receptor accessory protein 3	AK012403|Reep3|28193|receptor accessory protein 3	AK005026|Reep3|28193|receptor accessory protein 3	AK028868|Reep3|28193|receptor accessory protein 3
mm9_v1_chr2_+_163470487_163470585	0.306406	FOXQ1.p2	AK002842|0610039K10Rik|68386|RIKEN cDNA 0610039K10 gene
mm9_v1_chr2_+_180701920_180701946	0.305661	FOXQ1.p2	NM_001177707|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177708|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177709|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177710|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_145760|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK145879|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr4_+_66488606_66488658	0.304795	FOXQ1.p2	BC029856|Tlr4|21898|toll-like receptor 4	AK014533|Tlr4|21898|toll-like receptor 4	AK030348|Tlr4|21898|toll-like receptor 4	AF095353|Tlr4|21898|toll-like receptor 4
mm9_v1_chr1_+_89470601_89470620	0.304658	FOXQ1.p2	AK145284|Neu2|23956|neuraminidase 2	NM_001160163|Neu2|23956|neuraminidase 2	NM_001160164|Neu2|23956|neuraminidase 2	FJ613504|Neu2|23956|neuraminidase 2
mm9_v1_chr7_+_53039094_53039107	0.302092	FOXQ1.p2	BC059845|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr19_+_3972327_3972327	0.302062	FOXQ1.p2	AK136505|Aldh3b2|621603|aldehyde dehydrogenase 3 family, member B2	NM_001177438|Aldh3b2|621603|aldehyde dehydrogenase 3 family, member B2
mm9_v1_chr5_-_89088843_89089007	0.301587	FOXQ1.p2	AK208573|Grsf1|231413|G-rich RNA sequence binding factor 1	AK211991|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr14_+_120830603_120830641	0.300973	FOXQ1.p2	AK003316|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr9_+_44206258_44206258	0.299868	FOXQ1.p2	BC075655|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4	NM_008063|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr6_-_72382995_72383001	0.299828	FOXQ1.p2	
mm9_v1_chr7_+_51066659_51066663	0.299491	FOXQ1.p2	BC027823|Klk7|23993|kallikrein related-peptidase 7 (chymotryptic, stratum corneum)
mm9_v1_chr7_+_22399110_22399110	0.298627	FOXQ1.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_22881885_22881885	0.298627	FOXQ1.p2	NM_001166748|Vmn1r139|667444|vomeronasal 1 receptor 139
mm9_v1_chr7_+_23546715_23546715	0.298627	FOXQ1.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr7_+_21556203_21556203	0.298627	FOXQ1.p2	NM_001166847|Vmn1r112|100043569|vomeronasal 1 receptor 112
mm9_v1_chr9_-_21116749_21116776	0.295525	FOXQ1.p2	AF067146|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK010478|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK082674|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_001110300|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_009678|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chr7_-_4817767_4817818	0.29513	FOXQ1.p2	BC049278|Isoc2b|67441|isochorismatase domain containing 2b	AK002905|Isoc2b|67441|isochorismatase domain containing 2b	NM_026158|Isoc2b|67441|isochorismatase domain containing 2b
mm9_v1_chr7_+_5626205_5626228	0.292891	FOXQ1.p2	AF324867|Vmn1r62|81016|vomeronasal 1 receptor 62	NM_030741|Vmn1r62|81016|vomeronasal 1 receptor 62	BC113757|Vmn1r62|81016|vomeronasal 1 receptor 62
mm9_v1_chr9_+_72892614_72892671	0.29287	FOXQ1.p2	BC008173|Rab27a|11891|RAB27A, member RAS oncogene family	BC009656|Rab27a|11891|RAB27A, member RAS oncogene family	AK030529|Rab27a|11891|RAB27A, member RAS oncogene family	NM_023635|Rab27a|11891|RAB27A, member RAS oncogene family
mm9_v1_chr7_-_93924317_93924373	0.292202	FOXQ1.p2	BC119604|Folh1|53320|folate hydrolase	BC119605|Folh1|53320|folate hydrolase	AK002920|Folh1|53320|folate hydrolase	AF026380|Folh1|53320|folate hydrolase	AK090289|Folh1|53320|folate hydrolase	NM_001159706|Folh1|53320|folate hydrolase	NM_016770|Folh1|53320|folate hydrolase
mm9_v1_chr1_-_54983211_54983245	0.291538	FOXQ1.p2	AK038343|Ankrd44|329154|ankyrin repeat domain 44	NM_001081433|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr2_+_155576833_155576871	0.288363	FOXQ1.p2	AK143719|Procr|19124|protein C receptor, endothelial
mm9_v1_chr7_+_75418724_75418724	0.287987	FOXQ1.p2	NM_001013811|Fam169b|434197|family with sequence similarity 169, member B
mm9_v1_chr17_+_26852581_26852657	0.286933	FOXQ1.p2	AK030092|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	NM_029870|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK044760|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK020796|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132423|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	AK132454|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr2_-_84316891_84316933	0.28682	FOXQ1.p2	BC036146|Tfpi|21788|tissue factor pathway inhibitor	NM_001177319|Tfpi|21788|tissue factor pathway inhibitor	AK034752|Tfpi|21788|tissue factor pathway inhibitor	NM_001177320|Tfpi|21788|tissue factor pathway inhibitor
mm9_v1_chr7_+_51066811_51066836	0.285899	FOXQ1.p2	AF124299|Klk7|23993|kallikrein related-peptidase 7 (chymotryptic, stratum corneum)	AK029477|Klk7|23993|kallikrein related-peptidase 7 (chymotryptic, stratum corneum)	AK077406|Klk7|23993|kallikrein related-peptidase 7 (chymotryptic, stratum corneum)	NM_011872|Klk7|23993|kallikrein related-peptidase 7 (chymotryptic, stratum corneum)	AB008371|Klk7|23993|kallikrein related-peptidase 7 (chymotryptic, stratum corneum)
mm9_v1_chr18_+_69753035_69753127	0.285259	FOXQ1.p2	AK014343|Tcf4|21413|transcription factor 4	U16321|Tcf4|21413|transcription factor 4	AK132140|Tcf4|21413|transcription factor 4	BC014293|Tcf4|21413|transcription factor 4
mm9_v1_chr10_-_52058305_52058381	0.285176	FOXQ1.p2	AK008806|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr4_+_115410325_115410392	0.284403	FOXQ1.p2	AK030011|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	AK028618|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	AK163435|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	AK132525|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	AK033905|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	AK078691|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	AK080626|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene	AK028740|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene
mm9_v1_chr5_-_31950177_31950254	0.284222	FOXQ1.p2	AK214115|Rbks|71336|ribokinase
mm9_v1_chr5_-_66472208_66472234	0.283609	FOXQ1.p2	BC034195|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr11_-_6333725_6333827	0.283427	FOXQ1.p2	AK178770|H2afv|77605|H2A histone family, member V
mm9_v1_chr4_-_131394135_131394216	0.28339	FOXQ1.p2	BC080736|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	BC048694|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK052720|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	D88187|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK148515|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_001083119|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_011214|Ptpru|19273|protein tyrosine phosphatase, receptor type, U
mm9_v1_chr3_-_101640128_101640145	0.282447	FOXQ1.p2	NM_172295|Mab21l3|242125|mab-21-like 3 (C. elegans)
mm9_v1_chr14_-_73785035_73785066	0.281435	FOXQ1.p2	AK002599|Itm2b|16432|integral membrane protein 2B	AK153103|Itm2b|16432|integral membrane protein 2B	AK159307|Itm2b|16432|integral membrane protein 2B	AK003224|Itm2b|16432|integral membrane protein 2B	BC004731|Itm2b|16432|integral membrane protein 2B	AK003587|Itm2b|16432|integral membrane protein 2B	AK003928|Itm2b|16432|integral membrane protein 2B	AK088270|Itm2b|16432|integral membrane protein 2B	AK159340|Itm2b|16432|integral membrane protein 2B	AK159426|Itm2b|16432|integral membrane protein 2B	AK159628|Itm2b|16432|integral membrane protein 2B	AK159792|Itm2b|16432|integral membrane protein 2B	AK160101|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr1_+_97230610_97230736	0.280964	FOXQ1.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr2_+_132512617_132512719	0.279698	FOXQ1.p2	BC138171|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	AK004090|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chr6_-_115570256_115570290	0.27825	FOXQ1.p2	AB052739|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr19_-_34821529_34821600	0.277619	FOXQ1.p2	AK028284|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	AK029076|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	NM_172838|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm9_v1_chr18_+_21103125_21103125	0.277481	FOXQ1.p2	AK050395|Rnf125|67664|ring finger protein 125	NM_026301|Rnf125|67664|ring finger protein 125
mm9_v1_chr5_-_104542751_104542758	0.277262	FOXQ1.p2	BC003759|Sparcl1|13602|SPARC-like 1
mm9_v1_chr19_+_23240506_23240595	0.276968	FOXQ1.p2	AK187278|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr14_-_69151731_69151797	0.276949	FOXQ1.p2	AF013107|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK136692|Adam7|11500|a disintegrin and metallopeptidase domain 7	NM_007402|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK020312|Adam7|11500|a disintegrin and metallopeptidase domain 7
mm9_v1_chr1_+_130140700_130141098	0.276225	FOXQ1.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr12_-_86644527_86644534	0.275627	FOXQ1.p2	AK052182|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9
mm9_v1_chr18_+_69753146_69753168	0.275328	FOXQ1.p2	AK151433|Tcf4|21413|transcription factor 4
mm9_v1_chr11_-_74424353_74424416	0.274659	FOXQ1.p2	AK147290|Rap1gap2|380711|RAP1 GTPase activating protein 2
mm9_v1_chr15_+_82930619_82930668	0.274021	FOXQ1.p2	NM_023475|Serhl|68607|serine hydrolase-like	AJ245737|Serhl|68607|serine hydrolase-like	AJ251200|Serhl|68607|serine hydrolase-like	BC064069|Serhl|68607|serine hydrolase-like
mm9_v1_chr1_+_132628552_132628703	0.272902	FOXQ1.p2	AK053179|AA986860|212439|expressed sequence AA986860	NM_177604|AA986860|212439|expressed sequence AA986860	AK028957|AA986860|212439|expressed sequence AA986860	AK086121|AA986860|212439|expressed sequence AA986860
mm9_v1_chr3_-_130951398_130951434	0.272889	FOXQ1.p2	AK169238|Hadh|15107|hydroxyacyl-Coenzyme A dehydrogenase
mm9_v1_chr11_+_46268432_46268486	0.271016	FOXQ1.p2	AK148474|Havcr2|171285|hepatitis A virus cellular receptor 2	NM_134250|Havcr2|171285|hepatitis A virus cellular receptor 2	AF450241|Havcr2|171285|hepatitis A virus cellular receptor 2	AY553334|Havcr2|171285|hepatitis A virus cellular receptor 2	AK170775|Havcr2|171285|hepatitis A virus cellular receptor 2	BC106851|Havcr2|171285|hepatitis A virus cellular receptor 2	BC106852|Havcr2|171285|hepatitis A virus cellular receptor 2	AF399831|Havcr2|171285|hepatitis A virus cellular receptor 2
mm9_v1_chr2_-_24647157_24647300	0.270958	FOXQ1.p2	AK020308|Ehmt1|77683|euchromatic histone methyltransferase 1
mm9_v1_chr14_+_27399015_27399092	0.270874	FOXQ1.p2	AK054295|Fam116a|211922|family with sequence similarity 116, member A	NM_001134465|Fam116a|211922|family with sequence similarity 116, member A	NM_145969|Fam116a|211922|family with sequence similarity 116, member A	AK132219|Fam116a|211922|family with sequence similarity 116, member A	AK131163|Fam116a|211922|family with sequence similarity 116, member A	BC025603|Fam116a|211922|family with sequence similarity 116, member A	AK161908|Fam116a|211922|family with sequence similarity 116, member A	AK054197|Fam116a|211922|family with sequence similarity 116, member A
mm9_v1_chr5_+_130731488_130731494	0.270676	FOXQ1.p2	AK045279|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	NM_178897|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm9_v1_chr13_+_81022644_81022695	0.269242	FOXQ1.p2	AK088288|Arrdc3|105171|arrestin domain containing 3	AK084951|Arrdc3|105171|arrestin domain containing 3	BC054844|Arrdc3|105171|arrestin domain containing 3	NM_001042591|Arrdc3|105171|arrestin domain containing 3	BC044762|Arrdc3|105171|arrestin domain containing 3	BC098474|Arrdc3|105171|arrestin domain containing 3	AK122499|Arrdc3|105171|arrestin domain containing 3
mm9_v1_chr9_+_5345475_5345506	0.268274	FOXQ1.p2	AK077256|Casp12|12364|caspase 12	AK080045|Casp12|12364|caspase 12	NM_009808|Casp12|12364|caspase 12	AK046681|Casp12|12364|caspase 12	BC028979|Casp12|12364|caspase 12	AK161525|Casp12|12364|caspase 12	AK053407|Casp12|12364|caspase 12	AK030309|Casp12|12364|caspase 12	AY675223|Casp12|12364|caspase 12	AY675224|Casp12|12364|caspase 12
mm9_v1_chr15_+_10153734_10153771	0.268047	FOXQ1.p2	M22957|Prlr|19116|prolactin receptor	M22959|Prlr|19116|prolactin receptor	AK052679|Prlr|19116|prolactin receptor
mm9_v1_chr2_-_7002344_7002370	0.267944	FOXQ1.p2	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr5_-_130731280_130731426	0.267786	FOXQ1.p2	AK005079|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK019228|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK168847|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	BC003849|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	NM_023248|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK014648|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	X99668|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)
mm9_v1_chr14_+_13116681_13116761	0.267729	FOXQ1.p2	NM_146051|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	NM_178141|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK076182|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC094456|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	AK089971|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene	BC027421|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chr11_-_115794319_115794319	0.26666	FOXQ1.p2	AB059999|Recql5|170472|RecQ protein-like 5	NM_130454|Recql5|170472|RecQ protein-like 5
mm9_v1_chr15_-_75262160_75262258	0.2641	FOXQ1.p2	BC147461|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC147464|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	AK136484|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	BC087965|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene	NM_001039720|9030619P08Rik|105892|RIKEN cDNA 9030619P08 gene
mm9_v1_chrX_+_131135770_131135834	0.262906	FOXQ1.p2	AK141861|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK164115|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK168116|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	BC005461|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK169104|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK077716|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	NM_019868|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2
mm9_v1_chr6_-_99385338_99385338	0.262274	FOXQ1.p2	NM_053202|Foxp1|108655|forkhead box P1
mm9_v1_chr2_+_162758440_162758589	0.262084	FOXQ1.p2	AK051608|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr2_+_92025639_92025639	0.26185	FOXQ1.p2	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr6_-_42323208_42323279	0.260379	FOXQ1.p2	AF131197|Epha1|13835|Eph receptor A1	BC071215|Epha1|13835|Eph receptor A1	AK017662|Epha1|13835|Eph receptor A1	AK028478|Epha1|13835|Eph receptor A1	NM_023580|Epha1|13835|Eph receptor A1
mm9_v1_chr4_+_104829867_104829919	0.258421	FOXQ1.p2	AK159136|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr6_-_72383243_72383360	0.257719	FOXQ1.p2	AK191201|Mat2a|232087|methionine adenosyltransferase II, alpha	AK191379|Mat2a|232087|methionine adenosyltransferase II, alpha	AK192240|Mat2a|232087|methionine adenosyltransferase II, alpha	AK195580|Mat2a|232087|methionine adenosyltransferase II, alpha	AK196623|Mat2a|232087|methionine adenosyltransferase II, alpha	AK197103|Mat2a|232087|methionine adenosyltransferase II, alpha	AK200816|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203805|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203913|Mat2a|232087|methionine adenosyltransferase II, alpha	AK201922|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr16_+_4940800_4940851	0.257318	FOXQ1.p2	
mm9_v1_chr4_+_62220880_62220880	0.25681	FOXQ1.p2	AJ250999|Rgs3|50780|regulator of G-protein signaling 3	NM_019492|Rgs3|50780|regulator of G-protein signaling 3
mm9_v1_chr8_-_85856284_85856386	0.256432	FOXQ1.p2	AK041137|Elmod2|244548|ELMO domain containing 2	AK165222|Elmod2|244548|ELMO domain containing 2	AK036746|Elmod2|244548|ELMO domain containing 2	BC079654|Elmod2|244548|ELMO domain containing 2	AK029044|Elmod2|244548|ELMO domain containing 2	AK036607|Elmod2|244548|ELMO domain containing 2	AK084950|Elmod2|244548|ELMO domain containing 2	NM_001170691|Elmod2|244548|ELMO domain containing 2	NM_178736|Elmod2|244548|ELMO domain containing 2
mm9_v1_chr3_-_88138354_88138379	0.254686	FOXQ1.p2	AK009760|Tmem79|71913|transmembrane protein 79	NM_024246|Tmem79|71913|transmembrane protein 79
mm9_v1_chr13_+_23622912_23622975	0.253451	FOXQ1.p2	NM_153173|Hist1h4h|69386|histone cluster 1, H4h	AK007642|Hist1h4h|69386|histone cluster 1, H4h	BC087952|Hist1h4h|69386|histone cluster 1, H4h	BC028550|Hist1h4h|69386|histone cluster 1, H4h	BC058529|Hist1h4h|69386|histone cluster 1, H4h
mm9_v1_chr3_+_27883092_27883235	0.252812	FOXQ1.p2	NM_008875|Pld1|18805|phospholipase D1	BC068144|Pld1|18805|phospholipase D1
mm9_v1_chr1_+_108757767_108757779	0.252639	FOXQ1.p2	U54705|Serpinb5|20724|serine (or cysteine) peptidase inhibitor, clade B, member 5
mm9_v1_chr7_-_28714448_28714480	0.252342	FOXQ1.p2	AK079686|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	AK137340|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	NM_028538|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	AK160450|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene	BC069987|1700049G17Rik|73430|RIKEN cDNA 1700049G17 gene
mm9_v1_chr17_-_42829185_42829232	0.252211	FOXQ1.p2	BC140980|Gpr115|78249|G protein-coupled receptor 115	AK019508|Gpr115|78249|G protein-coupled receptor 115	BC089564|Gpr115|78249|G protein-coupled receptor 115	NM_030067|Gpr115|78249|G protein-coupled receptor 115
mm9_v1_chr18_+_63158808_63158850	0.252011	FOXQ1.p2	AK217399|Napg|108123|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm9_v1_chr2_+_152987262_152987297	0.251479	FOXQ1.p2	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr5_-_147032490_147032561	0.251318	FOXQ1.p2	AK017576|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK029912|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK150269|Rnf6|74132|ring finger protein (C3H2C3 type) 6	AK152106|Rnf6|74132|ring finger protein (C3H2C3 type) 6
mm9_v1_chr7_-_23929496_23929498	0.249882	FOXQ1.p2	AK139650|Gm5891|545929|predicted gene 5891	NM_001034904|Gm5891|545929|predicted gene 5891
mm9_v1_chr7_-_22706307_22706309	0.249882	FOXQ1.p2	AK139650|Gm5891|545929|predicted gene 5891	NM_001034904|Gm5891|545929|predicted gene 5891
mm9_v1_chr1_-_65097587_65097736	0.249041	FOXQ1.p2	K02584|Cryge|12968|crystallin, gamma E	BC057012|Cryge|12968|crystallin, gamma E	BC078417|Cryge|12968|crystallin, gamma E	AK014301|Cryge|12968|crystallin, gamma E	BC132506|Cryge|12968|crystallin, gamma E	BC132508|Cryge|12968|crystallin, gamma E	NM_007777|Cryge|12968|crystallin, gamma E
mm9_v1_chr11_+_94426358_94426387	0.247003	FOXQ1.p2	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chr11_-_51414597_51414704	0.246226	FOXQ1.p2	AK193201|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK196074|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK186800|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr4_+_57907600_57907648	0.245021	FOXQ1.p2	BC034188|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr5_-_149862867_149863025	0.244742	FOXQ1.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr9_-_99258896_99258975	0.244229	FOXQ1.p2	BC118967|Esyt3|272636|extended synaptotagmin-like protein 3	AK220532|Esyt3|272636|extended synaptotagmin-like protein 3	AK086367|Esyt3|272636|extended synaptotagmin-like protein 3	NM_177775|Esyt3|272636|extended synaptotagmin-like protein 3	AK142948|Esyt3|272636|extended synaptotagmin-like protein 3
mm9_v1_chr14_+_27707789_27707789	0.24278	FOXQ1.p2	AK052884|Asb14|142687|ankyrin repeat and SOCS box-containing 14	NM_001170748|Asb14|142687|ankyrin repeat and SOCS box-containing 14	NM_080856|Asb14|142687|ankyrin repeat and SOCS box-containing 14
mm9_v1_chr10_-_36858671_36858801	0.242655	FOXQ1.p2	BC046601|Marcks|17118|myristoylated alanine rich protein kinase C substrate	M60474|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC002068|Marcks|17118|myristoylated alanine rich protein kinase C substrate	BC039911|Marcks|17118|myristoylated alanine rich protein kinase C substrate	NM_008538|Marcks|17118|myristoylated alanine rich protein kinase C substrate
mm9_v1_chr6_-_129610573_129610706	0.242392	FOXQ1.p2	AF109785|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	NM_010653|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AK036555|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AF106011|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	NM_001098669|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AK040721|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2	AF106010|Klrc2|16642|killer cell lectin-like receptor subfamily C, member 2
mm9_v1_chr17_+_29178865_29178883	0.241815	FOXQ1.p2	
mm9_v1_chr4_-_109078858_109078861	0.241658	FOXQ1.p2	
mm9_v1_chr11_-_106062079_106062107	0.241348	FOXQ1.p2	AK011721|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr2_+_160471623_160471632	0.241239	FOXQ1.p2	AK145538|Top1|21969|topoisomerase (DNA) I	NM_009408|Top1|21969|topoisomerase (DNA) I
mm9_v1_chrX_+_8849858_8849881	0.241054	FOXQ1.p2	BC027097|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr8_-_86760940_86760953	0.240996	FOXQ1.p2	BC058080|Zswim4|212168|zinc finger, SWIM domain containing 4	NM_172503|Zswim4|212168|zinc finger, SWIM domain containing 4	AK041934|Zswim4|212168|zinc finger, SWIM domain containing 4	AK052168|Zswim4|212168|zinc finger, SWIM domain containing 4	AK053663|Zswim4|212168|zinc finger, SWIM domain containing 4	AK150221|Zswim4|212168|zinc finger, SWIM domain containing 4	AK155465|Zswim4|212168|zinc finger, SWIM domain containing 4
mm9_v1_chr2_+_164705533_164705558	0.240867	FOXQ1.p2	
mm9_v1_chr10_+_38685309_38685399	0.240722	FOXQ1.p2	AK053234|Lama4|16775|laminin, alpha 4	NM_010681|Lama4|16775|laminin, alpha 4	AK031189|Lama4|16775|laminin, alpha 4	AK087015|Lama4|16775|laminin, alpha 4	AK164903|Lama4|16775|laminin, alpha 4	U69176|Lama4|16775|laminin, alpha 4
mm9_v1_chr3_-_101640061_101640095	0.240613	FOXQ1.p2	AK161057|Mab21l3|242125|mab-21-like 3 (C. elegans)	BC037703|Mab21l3|242125|mab-21-like 3 (C. elegans)	AK172389|Mab21l3|242125|mab-21-like 3 (C. elegans)
mm9_v1_chr1_+_195128163_195128239	0.239505	FOXQ1.p2	NM_008484|Lamb3|16780|laminin, beta 3	U43298|Lamb3|16780|laminin, beta 3
mm9_v1_chr10_+_75610195_75610195	0.23776	FOXQ1.p2	AF251267|Slc5a4a|64452|solute carrier family 5, member 4a	NM_133184|Slc5a4a|64452|solute carrier family 5, member 4a
mm9_v1_chr1_+_190086716_190086716	0.237238	FOXQ1.p2	NM_021408|Ush2a|22283|Usher syndrome 2A (autosomal recessive, mild) homolog (human)
mm9_v1_chr7_-_4349321_4349345	0.236573	FOXQ1.p2	AK079424|Gp6|243816|glycoprotein 6 (platelet)	BC138170|Gp6|243816|glycoprotein 6 (platelet)	BC145172|Gp6|243816|glycoprotein 6 (platelet)	NM_001163014|Gp6|243816|glycoprotein 6 (platelet)
mm9_v1_chr16_-_94509462_94509462	0.23624	FOXQ1.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr2_-_51790406_51790534	0.235799	FOXQ1.p2	BC003333|Rbm43|71684|RNA binding motif protein 43	NM_001141981|Rbm43|71684|RNA binding motif protein 43	NM_030243|Rbm43|71684|RNA binding motif protein 43
mm9_v1_chr9_-_56995928_56996111	0.23545	FOXQ1.p2	AK155405|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	AK013322|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC043297|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC034873|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)
mm9_v1_chr11_-_68635236_68635451	0.235154	FOXQ1.p2	AK194070|Ndel1|83431|nuclear distribution gene E-like homolog 1 (A. nidulans)
mm9_v1_chr16_-_79091336_79091341	0.234848	FOXQ1.p2	NM_008941|Tmprss15|19146|transmembrane protease, serine 15	U73378|Tmprss15|19146|transmembrane protease, serine 15	BC117917|Tmprss15|19146|transmembrane protease, serine 15	BC117918|Tmprss15|19146|transmembrane protease, serine 15	AK033582|Tmprss15|19146|transmembrane protease, serine 15	NM_178855|Tmprss15|19146|transmembrane protease, serine 15
mm9_v1_chr6_+_121133684_121133684	0.234807	FOXQ1.p2	AK087637|Pex26|74043|peroxisomal biogenesis factor 26	NM_028730|Pex26|74043|peroxisomal biogenesis factor 26
mm9_v1_chr2_-_168427037_168427156	0.233459	FOXQ1.p2	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr3_+_85888818_85888835	0.233071	FOXQ1.p2	BC028254|Sh3d19|27059|SH3 domain protein D19
mm9_v1_chr15_+_97077537_97077537	0.232905	FOXQ1.p2	AK051480|Fam113b|239647|family with sequence similarity 113, member B	NM_172293|Fam113b|239647|family with sequence similarity 113, member B
mm9_v1_chr3_+_106487904_106487904	0.230968	FOXQ1.p2	NM_001039478|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr4_-_3799165_3799251	0.230837	FOXQ1.p2	BC137690|Mos|17451|Moloney sarcoma oncogene	BC145745|Mos|17451|Moloney sarcoma oncogene	AK133089|Mos|17451|Moloney sarcoma oncogene	NM_020021|Mos|17451|Moloney sarcoma oncogene
mm9_v1_chr4_-_143752454_143752553	0.230015	FOXQ1.p2	AY573563|Oog3|100012|oogenesin 3	BC053700|Oog3|100012|oogenesin 3	AK136030|Oog3|100012|oogenesin 3	NM_201258|Oog3|100012|oogenesin 3
mm9_v1_chr17_-_28536156_28536297	0.229591	FOXQ1.p2	AK164932|Fkbp5|14229|FK506 binding protein 5
mm9_v1_chr16_+_36694118_36694140	0.229078	FOXQ1.p2	AK050806|Ildr1|106347|immunoglobulin-like domain containing receptor 1	BC010485|Ildr1|106347|immunoglobulin-like domain containing receptor 1	NM_134109|Ildr1|106347|immunoglobulin-like domain containing receptor 1	AK035504|Ildr1|106347|immunoglobulin-like domain containing receptor 1	AK036844|Ildr1|106347|immunoglobulin-like domain containing receptor 1
mm9_v1_chr3_+_51299153_51299205	0.228485	FOXQ1.p2	
mm9_v1_chr9_-_54407862_54407915	0.227874	FOXQ1.p2	AB016080|Cib2|56506|calcium and integrin binding family member 2	NM_019686|Cib2|56506|calcium and integrin binding family member 2	BC005739|Cib2|56506|calcium and integrin binding family member 2
mm9_v1_chr11_+_67346499_67346579	0.227088	FOXQ1.p2	NM_008088|Gas7|14457|growth arrest specific 7	BC120528|Gas7|14457|growth arrest specific 7	BC120530|Gas7|14457|growth arrest specific 7
mm9_v1_chr3_+_59729135_59729135	0.225926	FOXQ1.p2	AK081819|C130079G13Rik|229333|RIKEN cDNA C130079G13 gene	NM_177661|C130079G13Rik|229333|RIKEN cDNA C130079G13 gene
mm9_v1_chr5_-_104543106_104543114	0.225524	FOXQ1.p2	NM_010097|Sparcl1|13602|SPARC-like 1
mm9_v1_chrX_+_72627673_72627773	0.224982	FOXQ1.p2	NM_026126|Fundc2|67391|FUN14 domain containing 2	AK013460|Fundc2|67391|FUN14 domain containing 2	AK014705|Fundc2|67391|FUN14 domain containing 2	AK031214|Fundc2|67391|FUN14 domain containing 2	BC049566|Fundc2|67391|FUN14 domain containing 2	BC061464|Fundc2|67391|FUN14 domain containing 2	AY234858|Fundc2|67391|FUN14 domain containing 2
mm9_v1_chr9_-_19976012_19976012	0.224792	FOXQ1.p2	NM_146904|Olfr870|57251|olfactory receptor 870
mm9_v1_chr17_-_26645403_26645422	0.22444	FOXQ1.p2	BC006967|Dusp1|19252|dual specificity phosphatase 1	X61940|Dusp1|19252|dual specificity phosphatase 1	AK159658|Dusp1|19252|dual specificity phosphatase 1	AK150433|Dusp1|19252|dual specificity phosphatase 1	AK152183|Dusp1|19252|dual specificity phosphatase 1	AK152905|Dusp1|19252|dual specificity phosphatase 1	AK159251|Dusp1|19252|dual specificity phosphatase 1	AK159363|Dusp1|19252|dual specificity phosphatase 1	AK159567|Dusp1|19252|dual specificity phosphatase 1	AK167602|Dusp1|19252|dual specificity phosphatase 1	AK168627|Dusp1|19252|dual specificity phosphatase 1	NM_013642|Dusp1|19252|dual specificity phosphatase 1	AK145903|Dusp1|19252|dual specificity phosphatase 1	AK152324|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr2_+_91551067_91551117	0.222906	FOXQ1.p2	AK147045|Harbi1|241547|harbinger transposase derived 1	AK084226|Harbi1|241547|harbinger transposase derived 1	AK080671|Harbi1|241547|harbinger transposase derived 1	BC094315|Harbi1|241547|harbinger transposase derived 1	NM_178724|Harbi1|241547|harbinger transposase derived 1	AK045343|Harbi1|241547|harbinger transposase derived 1
mm9_v1_chr12_-_99972803_99972854	0.222628	FOXQ1.p2	D37801|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK013777|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	AK030456|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21	NM_011877|Ptpn21|24000|protein tyrosine phosphatase, non-receptor type 21
mm9_v1_chr15_-_96529121_96529237	0.221985	FOXQ1.p2	AK164568|Slc38a2|67760|solute carrier family 38, member 2	AK018767|Slc38a2|67760|solute carrier family 38, member 2
mm9_v1_chr14_-_56649331_56649331	0.221031	FOXQ1.p2	AY007568|Mcpt9|17232|mast cell protease 9	NM_010782|Mcpt9|17232|mast cell protease 9
mm9_v1_chr17_+_25445590_25445590	0.220295	FOXQ1.p2	AK144498|Prss28|114661|protease, serine, 28	NM_053259|Prss28|114661|protease, serine, 28
mm9_v1_chr4_-_143490282_143490282	0.219994	FOXQ1.p2	NM_001085414|Pramef6|195555|PRAME family member 6
mm9_v1_chr3_+_53292633_53292714	0.219851	FOXQ1.p2	BC138667|Stoml3|229277|stomatin (Epb7.2)-like 3	BC138668|Stoml3|229277|stomatin (Epb7.2)-like 3	BC058224|Stoml3|229277|stomatin (Epb7.2)-like 3	BC080859|Stoml3|229277|stomatin (Epb7.2)-like 3	AB085692|Stoml3|229277|stomatin (Epb7.2)-like 3	BC140135|Stoml3|229277|stomatin (Epb7.2)-like 3	BC140175|Stoml3|229277|stomatin (Epb7.2)-like 3	BC143035|Stoml3|229277|stomatin (Epb7.2)-like 3	BC143150|Stoml3|229277|stomatin (Epb7.2)-like 3	NM_153156|Stoml3|229277|stomatin (Epb7.2)-like 3
mm9_v1_chr15_-_102008126_102008145	0.218849	FOXQ1.p2	
mm9_v1_chr4_+_104829951_104829954	0.217976	FOXQ1.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr3_+_136598184_136598389	0.217954	FOXQ1.p2	AK218972|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK179617|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	AK145309|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr16_+_14705932_14706066	0.217507	FOXQ1.p2	AK133968|Snai2|20583|snail homolog 2 (Drosophila)	BC062164|Snai2|20583|snail homolog 2 (Drosophila)	NM_011415|Snai2|20583|snail homolog 2 (Drosophila)	U79550|Snai2|20583|snail homolog 2 (Drosophila)	U97059|Snai2|20583|snail homolog 2 (Drosophila)
mm9_v1_chr6_+_17616617_17616660	0.216529	FOXQ1.p2	AK004237|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr6_-_6528581_6528672	0.215319	FOXQ1.p2	U41626|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK135462|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK167914|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC023490|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	BC058117|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK161690|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	X83589|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK160432|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	NM_009169|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1	AK141911|Shfm1|20422|split hand/foot malformation (ectrodactyly) type 1
mm9_v1_chr2_-_131855937_131856045	0.212297	FOXQ1.p2	AK172906|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr12_-_105282485_105282654	0.210897	FOXQ1.p2	AY326419|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014346|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	BC062143|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014589|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_026535|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
mm9_v1_chr9_-_66643210_66643296	0.21024	FOXQ1.p2	AK162585|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	AK049828|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	NM_177583|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	AK028521|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	BC079659|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)	AK154847|Aph1b|208117|anterior pharynx defective 1b homolog (C. elegans)
mm9_v1_chr9_+_118949880_118949887	0.209999	FOXQ1.p2	AK138484|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AK171161|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm9_v1_chr4_+_94260340_94260340	0.208251	FOXQ1.p2	NM_001081019|Gm12657|667250|predicted gene 12657
mm9_v1_chrX_+_8849905_8850039	0.208169	FOXQ1.p2	AK007734|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	NM_023500|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	AY534248|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125618|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125620|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr11_-_86398586_86398610	0.206965	FOXQ1.p2	AK219497|Tmem49|75909|transmembrane protein 49	AK180953|Tmem49|75909|transmembrane protein 49
mm9_v1_chr15_+_6336747_6336872	0.20613	FOXQ1.p2	NM_001037905|Dab2|13132|disabled homolog 2 (Drosophila)	NM_001102400|Dab2|13132|disabled homolog 2 (Drosophila)	NM_023118|Dab2|13132|disabled homolog 2 (Drosophila)	AK154716|Dab2|13132|disabled homolog 2 (Drosophila)	AK162744|Dab2|13132|disabled homolog 2 (Drosophila)	AK162851|Dab2|13132|disabled homolog 2 (Drosophila)	AK168375|Dab2|13132|disabled homolog 2 (Drosophila)	U18869|Dab2|13132|disabled homolog 2 (Drosophila)	AK165810|Dab2|13132|disabled homolog 2 (Drosophila)
mm9_v1_chr15_+_78730168_78730275	0.205865	FOXQ1.p2	AK161215|Sh3bp1|20401|SH3-domain binding protein 1	NM_009164|Sh3bp1|20401|SH3-domain binding protein 1	AK172060|Sh3bp1|20401|SH3-domain binding protein 1	AK166337|Sh3bp1|20401|SH3-domain binding protein 1	AK145156|Sh3bp1|20401|SH3-domain binding protein 1
mm9_v1_chr3_-_33980178_33980268	0.20428	FOXQ1.p2	BC024335|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	BC020327|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK008267|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK010204|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK012051|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK076602|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK007866|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	NM_001026211|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	NM_026332|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19
mm9_v1_chr9_+_118961874_118961922	0.204274	FOXQ1.p2	AK028229|Vill|22351|villin-like	AK166823|Vill|22351|villin-like	NM_001164567|Vill|22351|villin-like	NM_011700|Vill|22351|villin-like	AJ344341|Vill|22351|villin-like	BC021808|Vill|22351|villin-like
mm9_v1_chr3_+_144260300_144260351	0.203054	FOXQ1.p2	AK205282|Sep15|93684|selenoprotein	AK213933|Sep15|93684|selenoprotein	AK218207|Sep15|93684|selenoprotein
mm9_v1_chr2_-_110203264_110203281	0.198127	FOXQ1.p2	AK159648|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr5_-_99681835_99681949	0.197767	FOXQ1.p2	AK028756|Rasgef1b|320292|RasGEF domain family, member 1B	BC052726|Rasgef1b|320292|RasGEF domain family, member 1B	AK090085|Rasgef1b|320292|RasGEF domain family, member 1B	AK149812|Rasgef1b|320292|RasGEF domain family, member 1B	AY129963|Rasgef1b|320292|RasGEF domain family, member 1B	BC050858|Rasgef1b|320292|RasGEF domain family, member 1B	NM_145839|Rasgef1b|320292|RasGEF domain family, member 1B	NM_181318|Rasgef1b|320292|RasGEF domain family, member 1B
mm9_v1_chr8_+_81033220_81033473	0.196763	FOXQ1.p2	NM_029736|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK160402|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK079901|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152752|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152849|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK010834|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK165983|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK040517|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116666|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116717|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825926|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825927|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825928|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm9_v1_chr3_-_154718282_154718370	0.195715	FOXQ1.p2	AK052882|Tnni3k|435766|TNNI3 interacting kinase	BC139368|Tnni3k|435766|TNNI3 interacting kinase	BC139394|Tnni3k|435766|TNNI3 interacting kinase	AK084817|Tnni3k|435766|TNNI3 interacting kinase	AY526095|Tnni3k|435766|TNNI3 interacting kinase	AY526096|Tnni3k|435766|TNNI3 interacting kinase	NM_177066|Tnni3k|435766|TNNI3 interacting kinase
mm9_v1_chr6_+_89664196_89664196	0.195573	FOXQ1.p2	NM_053228|Vmn1r40|113855|vomeronasal 1 receptor 40
mm9_v1_chr17_+_47027553_47027615	0.195277	FOXQ1.p2	NM_178385|Tbcc|72726|tubulin-specific chaperone C
mm9_v1_chr17_+_72022808_72022818	0.195223	FOXQ1.p2	AK158647|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr6_+_145756902_145756931	0.195028	FOXQ1.p2	AF424737|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_027760|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC115779|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC117546|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm9_v1_chr5_-_104542729_104542746	0.194366	FOXQ1.p2	AK134608|Sparcl1|13602|SPARC-like 1
mm9_v1_chr8_-_98377390_98377440	0.193866	FOXQ1.p2	AK052548|Slc38a7|234595|solute carrier family 38, member 7	NM_172758|Slc38a7|234595|solute carrier family 38, member 7	AK195271|Slc38a7|234595|solute carrier family 38, member 7	AK171137|Slc38a7|234595|solute carrier family 38, member 7
mm9_v1_chr5_+_130263548_130263603	0.192867	FOXQ1.p2	AK199226|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr15_+_99223377_99223451	0.192435	FOXQ1.p2	NM_001171034|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_001171036|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	NM_026669|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK019865|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050299|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088030|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK088683|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK139901|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK159380|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK166935|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036782|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK036994|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK049604|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	AK050323|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6	BC005588|Tmbim6|110213|transmembrane BAX inhibitor motif containing 6
mm9_v1_chr9_-_85637765_85637765	0.192104	FOXQ1.p2	NM_001081282|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr5_-_104542598_104542621	0.191218	FOXQ1.p2	AK158725|Sparcl1|13602|SPARC-like 1
mm9_v1_chr3_-_37131486_37131557	0.191158	FOXQ1.p2	AY428162|Il21|60505|interleukin 21	DQ645418|Il21|60505|interleukin 21	BC125414|Il21|60505|interleukin 21	BC125416|Il21|60505|interleukin 21	AF254070|Il21|60505|interleukin 21	NM_021782|Il21|60505|interleukin 21
mm9_v1_chr19_+_8816292_8816349	0.19009	FOXQ1.p2	AK166087|Stx5a|56389|syntaxin 5A	NM_019829|Stx5a|56389|syntaxin 5A	BC021883|Stx5a|56389|syntaxin 5A
mm9_v1_chr5_+_32535080_32535120	0.18987	FOXQ1.p2	AK030142|Plb1|665270|phospholipase B1	NM_030072|Plb1|665270|phospholipase B1	AK015301|Plb1|665270|phospholipase B1	AK019494|Plb1|665270|phospholipase B1	AK015993|Plb1|665270|phospholipase B1
mm9_v1_chr11_+_67611772_67611789	0.189675	FOXQ1.p2	NM_001013013|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C	AK003267|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C	BC039565|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C
mm9_v1_chr18_-_43952520_43952536	0.189414	FOXQ1.p2	BC147098|Gm94|225443|predicted gene 94	BC147099|Gm94|225443|predicted gene 94	BC171995|Gm94|225443|predicted gene 94	AK131908|Gm94|225443|predicted gene 94	AK131907|Gm94|225443|predicted gene 94	NM_001033280|Gm94|225443|predicted gene 94
mm9_v1_chr19_+_8815893_8816001	0.188035	FOXQ1.p2	NM_001167799|Stx5a|56389|syntaxin 5A	AK002722|Stx5a|56389|syntaxin 5A	BC004849|Stx5a|56389|syntaxin 5A
mm9_v1_chr17_-_28536455_28536544	0.186296	FOXQ1.p2	AK199818|Fkbp5|14229|FK506 binding protein 5
mm9_v1_chr6_+_57354359_57354457	0.184535	FOXQ1.p2	BC125351|Vmn1r19|171200|vomeronasal 1 receptor 19	BC132235|Vmn1r19|171200|vomeronasal 1 receptor 19	NM_134182|Vmn1r19|171200|vomeronasal 1 receptor 19
mm9_v1_chr15_+_73582101_73582137	0.18353	FOXQ1.p2	AF035645|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chrX_+_148237785_148237953	0.183231	FOXQ1.p2	AK163416|Huwe1|59026|HECT, UBA and WWE domain containing 1	NM_021523|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK049460|Huwe1|59026|HECT, UBA and WWE domain containing 1	DQ097265|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK045183|Huwe1|59026|HECT, UBA and WWE domain containing 1	AY772010|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165140|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK165648|Huwe1|59026|HECT, UBA and WWE domain containing 1	AK031374|Huwe1|59026|HECT, UBA and WWE domain containing 1
mm9_v1_chrX_+_98877684_98877720	0.182994	FOXQ1.p2	AK041765|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr2_-_155984800_155984951	0.180217	FOXQ1.p2	AK134091|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr6_+_117857771_117857856	0.18004	FOXQ1.p2	NM_001166428|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_001166429|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr5_+_9100681_9100767	0.179907	FOXQ1.p2	AK140314|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	NM_001081029|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	AK087170|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene
mm9_v1_chr3_-_49561168_49561243	0.179025	FOXQ1.p2	AF416735|Pcdh18|73173|protocadherin 18	AK173204|Pcdh18|73173|protocadherin 18	BC052198|Pcdh18|73173|protocadherin 18	AK036560|Pcdh18|73173|protocadherin 18	AK032820|Pcdh18|73173|protocadherin 18	NM_130448|Pcdh18|73173|protocadherin 18
mm9_v1_chr13_+_38296760_38296835	0.17799	FOXQ1.p2	NM_026382|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK036713|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK012916|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK018315|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK087789|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK172155|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	AK007431|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	BC037073|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)	BC021443|Snrnp48|67797|small nuclear ribonucleoprotein 48 (U11/U12)
mm9_v1_chr11_+_99797604_99797636	0.177343	FOXQ1.p2	AK037252|Krtap31-2|432602|keratin associated protein 31-2	NM_001025244|Krtap31-2|432602|keratin associated protein 31-2	BC147120|Krtap31-2|432602|keratin associated protein 31-2	BC147121|Krtap31-2|432602|keratin associated protein 31-2
mm9_v1_chr3_+_95086405_95086449	0.177327	FOXQ1.p2	AK036588|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr3_-_113332817_113333068	0.177092	FOXQ1.p2	AK173272|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK179549|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK187884|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK084372|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK013288|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161974|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK163729|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK134241|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	BC043695|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161063|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_001038696|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_026043|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3
mm9_v1_chr17_-_8020162_8020169	0.176663	FOXQ1.p2	
mm9_v1_chr5_-_20387886_20387948	0.176452	FOXQ1.p2	AK152951|Phtf2|68770|putative homeodomain transcription factor 2	AK035536|Phtf2|68770|putative homeodomain transcription factor 2	AK042382|Phtf2|68770|putative homeodomain transcription factor 2	NM_172992|Phtf2|68770|putative homeodomain transcription factor 2
mm9_v1_chr2_+_142904128_142904227	0.176291	FOXQ1.p2	BC139152|Otor|57329|otoraplin	BC139153|Otor|57329|otoraplin	AK047965|Otor|57329|otoraplin	AJ243939|Otor|57329|otoraplin	AF243504|Otor|57329|otoraplin	NM_020595|Otor|57329|otoraplin
mm9_v1_chr2_-_110203298_110203336	0.175455	FOXQ1.p2	AK011548|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK012026|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chrX_-_70388714_70388762	0.173656	FOXQ1.p2	BC094343|Gm14685|574404|predicted gene 14685	NM_001025383|Gm14685|574404|predicted gene 14685
mm9_v1_chr19_-_5800268_5800325	0.173613	FOXQ1.p2	
mm9_v1_chr17_+_19499098_19499098	0.173557	FOXQ1.p2	NM_001104551|Vmn2r99|665376|vomeronasal 2, receptor 99
mm9_v1_chr7_-_105347984_105347990	0.172717	FOXQ1.p2	NM_001081167|B3gnt6|272411|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	BC039789|B3gnt6|272411|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
mm9_v1_chr17_+_34056555_34056581	0.17084	FOXQ1.p2	AK014566|Tapbp|21356|TAP binding protein	AF043943|Tapbp|21356|TAP binding protein
mm9_v1_chr9_-_54041231_54041328	0.170534	FOXQ1.p2	BC103670|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	BC104489|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	D00659|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	NM_007810|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	AK143323|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1
mm9_v1_chr18_+_60934249_60934326	0.168733	FOXQ1.p2	NM_020600|Rps14|20044|ribosomal protein S14	AK028106|Rps14|20044|ribosomal protein S14	AK003148|Rps14|20044|ribosomal protein S14	AK011213|Rps14|20044|ribosomal protein S14	AK012425|Rps14|20044|ribosomal protein S14	AK012584|Rps14|20044|ribosomal protein S14	AK019233|Rps14|20044|ribosomal protein S14	AK146976|Rps14|20044|ribosomal protein S14	AK168237|Rps14|20044|ribosomal protein S14	AK146325|Rps14|20044|ribosomal protein S14	BC042940|Rps14|20044|ribosomal protein S14	BC062874|Rps14|20044|ribosomal protein S14
mm9_v1_chr6_+_38553293_38553312	0.168519	FOXQ1.p2	AK138070|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chr11_+_46337752_46337752	0.168084	FOXQ1.p2	NM_001163357|Gm12169|210535|predicted gene 12169
mm9_v1_chr2_+_121854287_121854425	0.167069	FOXQ1.p2	AK148004|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK154934|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK161038|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	NM_144545|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	BC080788|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK147154|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J	AK019219|Eif3j|78655|eukaryotic translation initiation factor 3, subunit J
mm9_v1_chr19_-_40588255_40588287	0.166806	FOXQ1.p2	AK166943|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr16_-_85862579_85862641	0.166635	FOXQ1.p2	AK046558|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)	AK164560|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr4_+_132194931_132195032	0.166166	FOXQ1.p2	AK164591|Eya3|14050|eyes absent 3 homolog (Drosophila)	NM_210071|Eya3|14050|eyes absent 3 homolog (Drosophila)	NM_211357|Eya3|14050|eyes absent 3 homolog (Drosophila)	AK144653|Eya3|14050|eyes absent 3 homolog (Drosophila)	NM_010166|Eya3|14050|eyes absent 3 homolog (Drosophila)	BC052860|Eya3|14050|eyes absent 3 homolog (Drosophila)	U81604|Eya3|14050|eyes absent 3 homolog (Drosophila)	AK017913|5830409B07Rik|76020|RIKEN cDNA 5830409B07 gene	BC063259|Eya3|14050|eyes absent 3 homolog (Drosophila)
mm9_v1_chr16_+_97757687_97757704	0.165995	FOXQ1.p2	AK143831|Mx2|17858|myxovirus (influenza virus) resistance 2	AB029920|Mx2|17858|myxovirus (influenza virus) resistance 2	J03368|Mx2|17858|myxovirus (influenza virus) resistance 2	NM_013606|Mx2|17858|myxovirus (influenza virus) resistance 2	BC007127|Mx2|17858|myxovirus (influenza virus) resistance 2
mm9_v1_chr1_-_37947226_37947269	0.16485	FOXQ1.p2	BC020137|Mitd1|69028|MIT, microtubule interacting and transport, domain containing 1	AK171903|Mitd1|69028|MIT, microtubule interacting and transport, domain containing 1	NM_026913|Mitd1|69028|MIT, microtubule interacting and transport, domain containing 1
mm9_v1_chr18_+_69504145_69504185	0.164103	FOXQ1.p2	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr4_+_57907032_57907040	0.163628	FOXQ1.p2	AK086796|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr12_+_106801381_106801438	0.162047	FOXQ1.p2	NM_009747|Bdkrb2|12062|bradykinin receptor, beta 2	X78438|Bdkrb2|12062|bradykinin receptor, beta 2	X69682|Bdkrb2|12062|bradykinin receptor, beta 2	AK132469|Bdkrb2|12062|bradykinin receptor, beta 2	BC137755|Bdkrb2|12062|bradykinin receptor, beta 2	BC137756|Bdkrb2|12062|bradykinin receptor, beta 2
mm9_v1_chr1_+_51345952_51345993	0.161076	FOXQ1.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr5_+_139064086_139064121	0.158145	FOXQ1.p2	AK131909|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK131916|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	NM_183025|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK039936|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	BC055299|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene
mm9_v1_chr17_+_34056367_34056478	0.157717	FOXQ1.p2	NM_001025313|Tapbp|21356|TAP binding protein	NM_009318|Tapbp|21356|TAP binding protein
mm9_v1_chr13_-_23712946_23712992	0.157248	FOXQ1.p2	AK049948|Hist1h2be|319179|histone cluster 1, H2be	NM_001177653|Hist1h2be|319179|histone cluster 1, H2be	AK030546|Hist1h2be|319179|histone cluster 1, H2be	NM_178194|Hist1h2be|319179|histone cluster 1, H2be
mm9_v1_chr5_-_66543123_66543228	0.15666	FOXQ1.p2	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr5_+_31554072_31554103	0.156431	FOXQ1.p2	BC016516|Krtcap3|69815|keratinocyte associated protein 3	NM_027221|Krtcap3|69815|keratinocyte associated protein 3	AK007999|Krtcap3|69815|keratinocyte associated protein 3	BC107024|Krtcap3|69815|keratinocyte associated protein 3	BC107025|Krtcap3|69815|keratinocyte associated protein 3	BC027812|Krtcap3|69815|keratinocyte associated protein 3
mm9_v1_chr10_-_80363606_80363713	0.156411	FOXQ1.p2	AF144702|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	NM_013895|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chrX_+_54465272_54465331	0.15635	FOXQ1.p2	BC119225|Cd40lg|21947|CD40 ligand	NM_011616|Cd40lg|21947|CD40 ligand	X65453|Cd40lg|21947|CD40 ligand	EU274582|Cd40lg|21947|CD40 ligand
mm9_v1_chr11_-_99966939_99966954	0.155796	FOXQ1.p2	NM_001174099|Krt36|16673|keratin 36	AK132500|Krt36|16673|keratin 36
mm9_v1_chr17_-_65944300_65944335	0.155247	FOXQ1.p2	AK149040|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr1_+_9535477_9535591	0.15388	FOXQ1.p2	AK142041|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	NM_021511|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC003481|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AB041589|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK122207|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC055925|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK017683|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK010178|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019913|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019257|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm9_v1_chr5_+_28168486_28168486	0.151908	FOXQ1.p2	NM_008314|Htr5a|15563|5-hydroxytryptamine (serotonin) receptor 5A
mm9_v1_chr2_+_124978315_124978357	0.150588	FOXQ1.p2	AK052750|Slc12a1|20495|solute carrier family 12, member 1	AK085455|Slc12a1|20495|solute carrier family 12, member 1	AK128928|Slc12a1|20495|solute carrier family 12, member 1	NM_001079690|Slc12a1|20495|solute carrier family 12, member 1	NM_183354|Slc12a1|20495|solute carrier family 12, member 1	U20973|Slc12a1|20495|solute carrier family 12, member 1	U20974|Slc12a1|20495|solute carrier family 12, member 1	U20975|Slc12a1|20495|solute carrier family 12, member 1	BC016888|Slc12a1|20495|solute carrier family 12, member 1
mm9_v1_chr2_+_30006546_30006566	0.149305	FOXQ1.p2	AK011204|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr14_-_20642973_20643066	0.149066	FOXQ1.p2	AK162433|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK148686|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK162070|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK160555|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012451|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC023932|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC096571|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012460|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK003732|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	BC048357|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK012486|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	NM_026528|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene	AK160696|2700060E02Rik|68045|RIKEN cDNA 2700060E02 gene
mm9_v1_chr9_-_101101334_101101402	0.148656	FOXQ1.p2	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr12_+_53800302_53800317	0.147638	FOXQ1.p2	DQ233645|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr9_-_103255690_103255706	0.146674	FOXQ1.p2	
mm9_v1_chr1_-_69732373_69732533	0.146308	FOXQ1.p2	BC138606|Ikzf2|22779|IKAROS family zinc finger 2	BC138608|Ikzf2|22779|IKAROS family zinc finger 2	AK047925|Ikzf2|22779|IKAROS family zinc finger 2	AF044257|Ikzf2|22779|IKAROS family zinc finger 2	NM_011770|Ikzf2|22779|IKAROS family zinc finger 2
mm9_v1_chr3_+_96474053_96474053	0.146093	FOXQ1.p2	NM_001081139|Ankrd35|213121|ankyrin repeat domain 35
mm9_v1_chr4_-_94316806_94316834	0.145712	FOXQ1.p2	BC061228|Lrrc19|100061|leucine rich repeat containing 19	AK033594|Lrrc19|100061|leucine rich repeat containing 19	NM_175305|Lrrc19|100061|leucine rich repeat containing 19
mm9_v1_chr11_+_69809250_69809521	0.144695	FOXQ1.p2	NM_030064|Phf23|78246|PHD finger protein 23	AK019135|Phf23|78246|PHD finger protein 23	AK170729|Phf23|78246|PHD finger protein 23	BC033533|Phf23|78246|PHD finger protein 23	AK031159|Phf23|78246|PHD finger protein 23	AY099326|Phf23|78246|PHD finger protein 23	AY099327|Phf23|78246|PHD finger protein 23
mm9_v1_chr19_-_32423805_32423805	0.14442	FOXQ1.p2	BC076618|Sgms1|208449|sphingomyelin synthase 1	NM_001168525|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr1_+_181476534_181476659	0.143763	FOXQ1.p2	AK146681|Cnst|226744|consortin, connexin sorting protein	AK089290|Cnst|226744|consortin, connexin sorting protein	AK036332|Cnst|226744|consortin, connexin sorting protein	AK040899|Cnst|226744|consortin, connexin sorting protein	AK040666|Cnst|226744|consortin, connexin sorting protein	AK087361|Cnst|226744|consortin, connexin sorting protein	BC054802|Cnst|226744|consortin, connexin sorting protein	NM_146105|Cnst|226744|consortin, connexin sorting protein
mm9_v1_chr16_+_36694063_36694080	0.143426	FOXQ1.p2	AK136284|Ildr1|106347|immunoglobulin-like domain containing receptor 1	BC057644|Ildr1|106347|immunoglobulin-like domain containing receptor 1
mm9_v1_chr5_-_104542641_104542708	0.143263	FOXQ1.p2	U64827|Sparcl1|13602|SPARC-like 1
mm9_v1_chr7_-_25022472_25022616	0.142291	FOXQ1.p2	AF167316|Zfp109|56869|zinc finger protein 109	NM_020262|Zfp109|56869|zinc finger protein 109
mm9_v1_chr7_+_3568955_3568990	0.141521	FOXQ1.p2	AK019099|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	NM_025348|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120712|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120714|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK006243|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC061002|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK003133|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm9_v1_chr7_+_21003290_21003290	0.140218	FOXQ1.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr4_-_82531027_82531054	0.138689	FOXQ1.p2	AF035579|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC145993|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC132431|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	AF031896|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	NM_009887|Cer1|12622|cerberus 1 homolog (Xenopus laevis)
mm9_v1_chr3_+_136333793_136333805	0.138406	FOXQ1.p2	BC096652|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr4_-_143870368_143870368	0.138177	FOXQ1.p2	BC052827|Pramel5|384077|preferentially expressed antigen in melanoma like 5	NM_001085418|Pramel5|384077|preferentially expressed antigen in melanoma like 5
mm9_v1_chr11_-_94902584_94902717	0.137521	FOXQ1.p2	AF267660|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK002647|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	BC021764|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	NM_133667|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2
mm9_v1_chr7_-_5364746_5364746	0.137492	FOXQ1.p2	AF324869|Vmn1r58|81014|vomeronasal 1 receptor 58	NM_030739|Vmn1r58|81014|vomeronasal 1 receptor 58
mm9_v1_chr7_-_97129450_97129518	0.136913	FOXQ1.p2	BC012966|Eed|13626|embryonic ectoderm development	U78103|Eed|13626|embryonic ectoderm development	NM_021876|Eed|13626|embryonic ectoderm development	U97675|Eed|13626|embryonic ectoderm development
mm9_v1_chr9_+_107482499_107482500	0.135269	FOXQ1.p2	BC026545|Nat6|56441|N-acetyltransferase 6	NM_019750|Nat6|56441|N-acetyltransferase 6
mm9_v1_chr9_+_7692110_7692113	0.134628	FOXQ1.p2	BC119057|Mmp7|17393|matrix metallopeptidase 7	BC120655|Mmp7|17393|matrix metallopeptidase 7	NM_010810|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr11_-_86621130_86621161	0.133095	FOXQ1.p2	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr7_+_23198601_23198601	0.132265	FOXQ1.p2	NM_001166844|Vmn1r100|100043536|vomeronasal 1 receptor 100
mm9_v1_chr1_-_58752798_58752832	0.129284	FOXQ1.p2	AK077190|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK016678|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK133373|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	NM_175370|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)
mm9_v1_chr11_+_116295406_116295422	0.129168	FOXQ1.p2	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr3_-_79541715_79541801	0.128881	FOXQ1.p2	AY509975|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	NM_212452|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	AK137655|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1
mm9_v1_chr17_+_78599556_78599594	0.128698	FOXQ1.p2	NM_015800|Crim1|50766|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm9_v1_chr16_+_65520846_65520963	0.12837	FOXQ1.p2	BC061213|Pou1f1|18736|POU domain, class 1, transcription factor 1	D12885|Pou1f1|18736|POU domain, class 1, transcription factor 1	NM_008849|Pou1f1|18736|POU domain, class 1, transcription factor 1	X57512|Pou1f1|18736|POU domain, class 1, transcription factor 1
mm9_v1_chr2_-_56976413_56976478	0.127017	FOXQ1.p2	NM_001139509|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr1_-_140739020_140739033	0.127007	FOXQ1.p2	AK031478|Lhx9|16876|LIM homeobox protein 9	NM_001025565|Lhx9|16876|LIM homeobox protein 9	NM_001042577|Lhx9|16876|LIM homeobox protein 9	BC072623|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr15_-_74813781_74813859	0.124305	FOXQ1.p2	AF232024|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC125350|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC132052|Ly6i|57248|lymphocyte antigen 6 complex, locus I	BC145087|Ly6i|57248|lymphocyte antigen 6 complex, locus I	NM_020498|Ly6i|57248|lymphocyte antigen 6 complex, locus I
mm9_v1_chr12_+_66137328_66137352	0.123824	FOXQ1.p2	AK168462|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)	BC034078|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm9_v1_chr19_+_8797973_8797989	0.121122	FOXQ1.p2	AK036616|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK043166|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK051045|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1
mm9_v1_chr3_+_125106995_125107008	0.119739	FOXQ1.p2	AF520870|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	AK140992|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	NM_022565|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm9_v1_chr1_-_164670534_164670687	0.119134	FOXQ1.p2	AK013732|Prrc2c|226562|proline-rich coiled-coil 2C	AK077748|Prrc2c|226562|proline-rich coiled-coil 2C	BC053406|Prrc2c|226562|proline-rich coiled-coil 2C	BC064009|Prrc2c|226562|proline-rich coiled-coil 2C	BC021412|Prrc2c|226562|proline-rich coiled-coil 2C	BC037745|Prrc2c|226562|proline-rich coiled-coil 2C	BC080672|Prrc2c|226562|proline-rich coiled-coil 2C	AK030766|Prrc2c|226562|proline-rich coiled-coil 2C	AK135245|Prrc2c|226562|proline-rich coiled-coil 2C	BC006723|Prrc2c|226562|proline-rich coiled-coil 2C	AK007762|Prrc2c|226562|proline-rich coiled-coil 2C	AK167018|Prrc2c|226562|proline-rich coiled-coil 2C	AK082487|Prrc2c|226562|proline-rich coiled-coil 2C	AK166509|Prrc2c|226562|proline-rich coiled-coil 2C	NM_001081290|Prrc2c|226562|proline-rich coiled-coil 2C
mm9_v1_chr9_+_110235785_110235800	0.117008	FOXQ1.p2	NM_001001144|Scap|235623|SREBF chaperone	NM_001103162|Scap|235623|SREBF chaperone
mm9_v1_chr10_+_19432392_19432408	0.115817	FOXQ1.p2	AK054215|Il20ra|237313|interleukin 20 receptor, alpha	NM_172786|Il20ra|237313|interleukin 20 receptor, alpha	BC056628|Il20ra|237313|interleukin 20 receptor, alpha
mm9_v1_chrX_-_98417753_98417901	0.115603	FOXQ1.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr14_+_106081278_106081354	0.11554	FOXQ1.p2	
mm9_v1_chr2_-_77784222_77784355	0.114964	FOXQ1.p2	BC003993|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	BC099952|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK089988|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK149528|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK051237|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK077961|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK088752|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK166487|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	NM_030560|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK045589|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK143352|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	BC089523|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)	AK132001|Cwc22|80744|CWC22 spliceosome-associated protein homolog (S. cerevisiae)
mm9_v1_chr17_-_26978455_26978553	0.114478	FOXQ1.p2	NM_008700|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	X75415|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chrX_+_54341282_54341282	0.11352	FOXQ1.p2	AB036708|Vgll1|170828|vestigial like 1 homolog (Drosophila)	NM_133251|Vgll1|170828|vestigial like 1 homolog (Drosophila)
mm9_v1_chr18_-_60872888_60873042	0.113315	FOXQ1.p2	AF049894|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AF074926|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC066098|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC079561|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	NM_008306|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr14_-_65059694_65059876	0.11288	FOXQ1.p2	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr15_+_35225852_35225866	0.112855	FOXQ1.p2	AK017286|Osr2|107587|odd-skipped related 2 (Drosophila)	AK052147|Osr2|107587|odd-skipped related 2 (Drosophila)	AK161267|Osr2|107587|odd-skipped related 2 (Drosophila)	AF370121|Osr2|107587|odd-skipped related 2 (Drosophila)	NM_054049|Osr2|107587|odd-skipped related 2 (Drosophila)
mm9_v1_chr19_-_46470175_46470258	0.112571	FOXQ1.p2	BC007131|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK010632|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AB010297|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_016860|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK019518|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK168889|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK088062|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK167450|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK162248|Actr1a|54130|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
mm9_v1_chrX_+_156278399_156278494	0.112512	FOXQ1.p2	AK028299|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135728|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr9_+_46091073_46091104	0.111087	FOXQ1.p2	AK038126|Bud13|215051|BUD13 homolog (yeast)	AK051047|Bud13|215051|BUD13 homolog (yeast)	AK077744|Bud13|215051|BUD13 homolog (yeast)	NM_146000|Bud13|215051|BUD13 homolog (yeast)	AK037134|Bud13|215051|BUD13 homolog (yeast)	BC025490|Bud13|215051|BUD13 homolog (yeast)
mm9_v1_chr2_+_152987036_152987075	0.109674	FOXQ1.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr2_+_120802698_120802797	0.109633	FOXQ1.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr7_-_38804503_38804582	0.109415	FOXQ1.p2	AK160558|C80913|19777|expressed sequence C80913	AK155994|C80913|19777|expressed sequence C80913	AK166566|C80913|19777|expressed sequence C80913	AK170929|C80913|19777|expressed sequence C80913	NM_011274|C80913|19777|expressed sequence C80913
mm9_v1_chr6_-_60779848_60779848	0.109007	FOXQ1.p2	AF179273|Snca|20617|synuclein, alpha	NM_009221|Snca|20617|synuclein, alpha
mm9_v1_chr11_-_86517662_86517713	0.108029	FOXQ1.p2	AK167527|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr6_+_72253241_72253241	0.107596	FOXQ1.p2	NM_147779|Sftpb|20388|surfactant associated protein B
mm9_v1_chr18_-_61696105_61696313	0.107377	FOXQ1.p2	AK017546|5730411F24Rik|70507|RIKEN cDNA 5730411F24 gene	NM_177828|Arhgef37|328967|Rho guanine nucleotide exchange factor (GEF) 37
mm9_v1_chr7_+_20686506_20686506	0.107281	FOXQ1.p2	NM_001166736|Vmn1r91|667067|vomeronasal 1 receptor 91
mm9_v1_chr9_-_115152895_115153139	0.105843	FOXQ1.p2	AK213927|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr4_-_107743887_107743940	0.105256	FOXQ1.p2	AK002425|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr2_+_155215225_155215281	0.104752	FOXQ1.p2	AK079304|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr10_-_128133261_128133372	0.104013	FOXQ1.p2	AK144551|Rab5b|19344|RAB5B, member RAS oncogene family	AK083034|Rab5b|19344|RAB5B, member RAS oncogene family	AK081251|Rab5b|19344|RAB5B, member RAS oncogene family	NM_177411|Rab5b|19344|RAB5B, member RAS oncogene family
mm9_v1_chr4_+_104829963_104829965	0.102394	FOXQ1.p2	BC005558|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr18_+_75160121_75160211	0.101198	FOXQ1.p2	NM_001002239|Rpl17|319195|ribosomal protein L17	BC091759|Rpl17|319195|ribosomal protein L17	AK088443|Rpl17|319195|ribosomal protein L17	AK002770|Rpl17|319195|ribosomal protein L17	AK011132|Rpl17|319195|ribosomal protein L17	AK011133|Rpl17|319195|ribosomal protein L17	AK137077|Rpl17|319195|ribosomal protein L17	BC090990|Rpl17|319195|ribosomal protein L17
mm9_v1_chr5_+_20388325_20388326	0.0991257	FOXQ1.p2	AK083535|Tmem60|212090|transmembrane protein 60
mm9_v1_chr4_-_118081793_118081882	0.098625	FOXQ1.p2	GU433214|Szt2|230676|seizure threshold 2	FJ998170|Szt2|230676|seizure threshold 2	NM_198170|Szt2|230676|seizure threshold 2
mm9_v1_chr14_-_60216634_60216802	0.09859	FOXQ1.p2	AK217714|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	BC006901|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK038926|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032600|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK009280|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032813|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK045962|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK039148|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK042494|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168535|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168536|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168537|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168538|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_027986|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1
mm9_v1_chr2_-_89892475_89892478	0.0985017	FOXQ1.p2	BC111111|Olfr140|57272|olfactory receptor 140	BC141888|Olfr140|57272|olfactory receptor 140	NM_020515|Olfr140|57272|olfactory receptor 140
mm9_v1_chrX_+_70368406_70368454	0.0984594	FOXQ1.p2	NM_001025383|Gm14685|574404|predicted gene 14685	BC094343|Gm14685|574404|predicted gene 14685
mm9_v1_chr9_-_21043659_21043781	0.0981436	FOXQ1.p2	AK150437|Keap1|50868|kelch-like ECH-associated protein 1	AK152142|Keap1|50868|kelch-like ECH-associated protein 1	AK004738|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110305|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110306|Keap1|50868|kelch-like ECH-associated protein 1	NM_001110307|Keap1|50868|kelch-like ECH-associated protein 1	NM_016679|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chr5_-_143666064_143666381	0.0975608	FOXQ1.p2	AK218630|Actb|11461|actin, beta	BC040513|Actb|11461|actin, beta	AB028847|Actb|11461|actin, beta	AK212447|Actb|11461|actin, beta	AY618569|Actb|11461|actin, beta	U89400|Actb|11461|actin, beta	AK187650|Actb|11461|actin, beta	AK201181|Actb|11461|actin, beta	AK204356|Actb|11461|actin, beta	AK208556|Actb|11461|actin, beta
mm9_v1_chr16_+_37887639_37887665	0.0975046	FOXQ1.p2	AK007464|Lrrc58|320184|leucine rich repeat containing 58
mm9_v1_chr4_+_143649028_143649028	0.0973944	FOXQ1.p2	AK145585|Pramel4|347710|preferentially expressed antigen in melanoma like 4	AK163305|Pramel4|347710|preferentially expressed antigen in melanoma like 4	NM_001001319|Pramel4|347710|preferentially expressed antigen in melanoma like 4
mm9_v1_chr4_+_8534378_8534506	0.0953371	FOXQ1.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr15_-_76476688_76476767	0.0932378	FOXQ1.p2	AK028994|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chr5_-_101103051_101103304	0.0918092	FOXQ1.p2	BC080773|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	AK009092|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)	NM_027978|Coq2|71883|coenzyme Q2 homolog, prenyltransferase (yeast)
mm9_v1_chr16_+_33185137_33185252	0.0917064	FOXQ1.p2	BC035278|Osbpl11|106326|oxysterol binding protein-like 11	NM_176840|Osbpl11|106326|oxysterol binding protein-like 11	BC099400|Osbpl11|106326|oxysterol binding protein-like 11
mm9_v1_chr6_+_142563114_142563114	0.0913254	FOXQ1.p2	AK019938|5330439B14Rik|321015|RIKEN cDNA 5330439B14 gene	NM_177314|5330439B14Rik|321015|RIKEN cDNA 5330439B14 gene
mm9_v1_chr17_-_35183667_35183733	0.0910556	FOXQ1.p2	NM_001146215|Msh5|17687|mutS homolog 5 (E. coli)	AF107352|Msh5|17687|mutS homolog 5 (E. coli)	AK042083|Msh5|17687|mutS homolog 5 (E. coli)
mm9_v1_chr7_-_109019233_109019294	0.089688	FOXQ1.p2	AK002275|Folr1|14275|folate receptor 1 (adult)
mm9_v1_chr12_+_72456427_72456435	0.0894691	FOXQ1.p2	
mm9_v1_chr6_-_57929295_57929295	0.0893541	FOXQ1.p2	NM_053238|Vmn1r25|113865|vomeronasal 1 receptor 25
mm9_v1_chr11_-_106640755_106640876	0.0886303	FOXQ1.p2	AF177202|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC119131|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC144810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK042777|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK041591|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK164730|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK169977|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	NM_015810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit
mm9_v1_chr16_+_55966387_55966447	0.0879468	FOXQ1.p2	NM_024218|Rpl24|68193|ribosomal protein L24
mm9_v1_chr2_+_85791221_85791221	0.0870688	FOXQ1.p2	NM_001011774|Olfr1028|257936|olfactory receptor 1028
mm9_v1_chr4_-_132313025_132313152	0.0869482	FOXQ1.p2	AK166253|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	BC009087|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	NM_133888|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	AK154599|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B
mm9_v1_chr5_-_90692344_90692414	0.0859944	FOXQ1.p2	AK153560|Ankrd17|81702|ankyrin repeat domain 17
mm9_v1_chr15_+_10994444_10994583	0.085303	FOXQ1.p2	AK145096|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK135354|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	NM_175501|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK054015|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK048612|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm9_v1_chr14_-_57676781_57676936	0.0851462	FOXQ1.p2	NM_016975|Gja3|14611|gap junction protein, alpha 3	BC138492|Gja3|14611|gap junction protein, alpha 3	BC138493|Gja3|14611|gap junction protein, alpha 3	AY390398|Gja3|14611|gap junction protein, alpha 3
mm9_v1_chr10_+_127335573_127335617	0.0838415	FOXQ1.p2	AK037184|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	BC064820|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	NM_027301|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	AY044433|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7
mm9_v1_chr2_+_154439056_154439103	0.0825837	FOXQ1.p2	AK089176|Zfp341|228807|zinc finger protein 341	BC057098|Zfp341|228807|zinc finger protein 341	NM_199304|Zfp341|228807|zinc finger protein 341
mm9_v1_chr12_-_11215753_11215777	0.0824822	FOXQ1.p2	AF261105|Msgn1|56184|mesogenin 1	NM_019544|Msgn1|56184|mesogenin 1	BC116996|Msgn1|56184|mesogenin 1
mm9_v1_chr16_-_55934909_55934966	0.0822991	FOXQ1.p2	BC065773|Cep97|74201|centrosomal protein 97	AK079884|Cep97|74201|centrosomal protein 97	AK154885|Cep97|74201|centrosomal protein 97	AK012971|Cep97|74201|centrosomal protein 97	AK080249|Cep97|74201|centrosomal protein 97	BC067049|Cep97|74201|centrosomal protein 97	NM_001159364|Cep97|74201|centrosomal protein 97	NM_001159365|Cep97|74201|centrosomal protein 97	NM_001159366|Cep97|74201|centrosomal protein 97	NM_028815|Cep97|74201|centrosomal protein 97	AK040079|Cep97|74201|centrosomal protein 97
mm9_v1_chr17_+_30272123_30272409	0.0822805	FOXQ1.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr18_+_37571327_37571327	0.0822441	FOXQ1.p2	NM_053135|Pcdhb10|93881|protocadherin beta 10
mm9_v1_chr13_+_109444370_109444370	0.0821506	FOXQ1.p2	AF536978|Pde4d|238871|phosphodiesterase 4D, cAMP specific	NM_011056|Pde4d|238871|phosphodiesterase 4D, cAMP specific
mm9_v1_chr19_-_5797749_5797761	0.0817693	FOXQ1.p2	AK141413|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr14_+_27457610_27457865	0.0814538	FOXQ1.p2	AK013892|Arf4|11843|ADP-ribosylation factor 4	AK002302|Arf4|11843|ADP-ribosylation factor 4	AK168793|Arf4|11843|ADP-ribosylation factor 4	NM_007479|Arf4|11843|ADP-ribosylation factor 4	AK081686|Arf4|11843|ADP-ribosylation factor 4	AK153011|Arf4|11843|ADP-ribosylation factor 4	BC115650|Arf4|11843|ADP-ribosylation factor 4	BC115651|Arf4|11843|ADP-ribosylation factor 4	D87901|Arf4|11843|ADP-ribosylation factor 4
mm9_v1_chr12_+_112404645_112404765	0.0806452	FOXQ1.p2	AK147304|Traf3|22031|TNF receptor-associated factor 3	NM_001048206|Traf3|22031|TNF receptor-associated factor 3	NM_011632|Traf3|22031|TNF receptor-associated factor 3	U21050|Traf3|22031|TNF receptor-associated factor 3
mm9_v1_chr16_-_58918311_58918311	0.0804619	FOXQ1.p2	NM_001011662|Olfr180|258178|olfactory receptor 180
mm9_v1_chr18_-_39649411_39649429	0.0793024	FOXQ1.p2	BC008154|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr8_-_19447605_19447605	0.0792956	FOXQ1.p2	AJ300674|Defb8|244334|defensin beta 8	NM_153108|Defb8|244334|defensin beta 8
mm9_v1_chr19_-_37281762_37281782	0.0788017	FOXQ1.p2	BC128377|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	AY313774|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3	NM_198300|Cpeb3|208922|cytoplasmic polyadenylation element binding protein 3
mm9_v1_chr15_-_58614642_58614788	0.0787891	FOXQ1.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr2_-_25110892_25110940	0.0786502	FOXQ1.p2	BC049789|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK163207|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK143124|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK169885|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK019617|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	NM_001082476|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1
mm9_v1_chr13_+_73674194_73674271	0.078441	FOXQ1.p2	BC054119|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	NM_010020|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK032629|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK136885|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	U16265|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AF109072|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
mm9_v1_chr2_+_172847371_172847458	0.0783732	FOXQ1.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr2_-_24618566_24618692	0.0780006	FOXQ1.p2	AF042317|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_001042528|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_007579|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	U04999|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm9_v1_chr12_+_8954734_8954801	0.077796	FOXQ1.p2	NM_010770|Matn3|17182|matrilin 3	AK160954|Matn3|17182|matrilin 3	Y10521|Matn3|17182|matrilin 3	AK048456|Matn3|17182|matrilin 3	BC071224|Matn3|17182|matrilin 3
mm9_v1_chr2_-_79969429_79969614	0.0773571	FOXQ1.p2	AK050004|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001159582|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK021279|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr18_-_42421635_42421796	0.0773049	FOXQ1.p2	AK166827|Lars|107045|leucyl-tRNA synthetase	AK129337|Lars|107045|leucyl-tRNA synthetase	BC052715|Lars|107045|leucyl-tRNA synthetase	NM_134137|Lars|107045|leucyl-tRNA synthetase	AK009823|Lars|107045|leucyl-tRNA synthetase	AK010041|Lars|107045|leucyl-tRNA synthetase
mm9_v1_chrX_-_67618235_67618286	0.0765139	FOXQ1.p2	AK132287|Ids|15931|iduronate 2-sulfatase	AK085237|Ids|15931|iduronate 2-sulfatase	AF538870|Ids|15931|iduronate 2-sulfatase	NM_010498|Ids|15931|iduronate 2-sulfatase
mm9_v1_chr12_-_30817451_30817473	0.0764252	FOXQ1.p2	AK047843|Tpo|22018|thyroid peroxidase	NM_009417|Tpo|22018|thyroid peroxidase	X60703|Tpo|22018|thyroid peroxidase
mm9_v1_chr13_-_85428957_85429102	0.0762589	FOXQ1.p2	NM_145452|Rasa1|218397|RAS p21 protein activator 1	AK046620|Rasa1|218397|RAS p21 protein activator 1
mm9_v1_chr17_-_79384763_79384778	0.0756067	FOXQ1.p2	AK050059|Prkd3|75292|protein kinase D3
mm9_v1_chr4_+_13678443_13678575	0.0755761	FOXQ1.p2	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr4_+_115410434_115410451	0.0746617	FOXQ1.p2	AK079503|4732418C07Rik|230648|RIKEN cDNA 4732418C07 gene
mm9_v1_chr9_+_57976894_57976894	0.0740386	FOXQ1.p2	BC075657|Stra6|20897|stimulated by retinoic acid gene 6	NM_001162475|Stra6|20897|stimulated by retinoic acid gene 6
mm9_v1_chr15_+_81900546_81900546	0.0739677	FOXQ1.p2	NM_028897|Mei1|74369|meiosis defective 1
mm9_v1_chr15_-_66801093_66801186	0.0735099	FOXQ1.p2	BC141246|Ndrg1|17988|N-myc downstream regulated gene 1	BC171968|Ndrg1|17988|N-myc downstream regulated gene 1	BC015282|Ndrg1|17988|N-myc downstream regulated gene 1	U52073|Ndrg1|17988|N-myc downstream regulated gene 1	BC071235|Ndrg1|17988|N-myc downstream regulated gene 1
mm9_v1_chr6_+_90072636_90072636	0.0734916	FOXQ1.p2	BC046308|Vmn1r51|22296|vomeronasal 1 receptor 51	NM_011683|Vmn1r51|22296|vomeronasal 1 receptor 51
mm9_v1_chr5_-_77836974_77837014	0.0728858	FOXQ1.p2	BC047202|Igfbp7|29817|insulin-like growth factor binding protein 7
mm9_v1_chr10_-_29255606_29255672	0.0713898	FOXQ1.p2	BC103794|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK076308|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK013366|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AB055811|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK133916|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	NM_028351|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)
mm9_v1_chr3_+_94968227_94968295	0.0699679	FOXQ1.p2	AF363972|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF363973|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB013729|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_011351|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm9_v1_chr7_-_109019196_109019205	0.0697103	FOXQ1.p2	AF096319|Folr1|14275|folate receptor 1 (adult)	NM_008034|Folr1|14275|folate receptor 1 (adult)
mm9_v1_chr5_+_53174293_53174344	0.0688845	FOXQ1.p2	AK138997|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK049511|Zcchc4|78796|zinc finger, CCHC domain containing 4	NM_030185|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK019621|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK143805|Zcchc4|78796|zinc finger, CCHC domain containing 4
mm9_v1_chr19_+_12502394_12502461	0.0687835	FOXQ1.p2	NM_019540|Pfpl|56093|pore forming protein-like	AF250839|Pfpl|56093|pore forming protein-like	BC052215|Pfpl|56093|pore forming protein-like	AK141262|Pfpl|56093|pore forming protein-like
mm9_v1_chr3_+_130813214_130813388	0.0681038	FOXQ1.p2	BC057543|Lef1|16842|lymphoid enhancer binding factor 1	AK131979|Lef1|16842|lymphoid enhancer binding factor 1	AK158769|Lef1|16842|lymphoid enhancer binding factor 1	NM_010703|Lef1|16842|lymphoid enhancer binding factor 1	X58636|Lef1|16842|lymphoid enhancer binding factor 1
mm9_v1_chr11_+_43247209_43247232	0.0670511	FOXQ1.p2	NM_148673|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	NM_198936|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr2_+_26775279_26775409	0.0655541	FOXQ1.p2	AK215042|Surf2|20931|surfeit gene 2
mm9_v1_chr19_+_45122065_45122176	0.0652695	FOXQ1.p2	NM_001178012|Sfxn3|94280|sideroflexin 3	NM_001178013|Sfxn3|94280|sideroflexin 3	NM_053197|Sfxn3|94280|sideroflexin 3	BC012208|Sfxn3|94280|sideroflexin 3
mm9_v1_chr16_+_33500899_33501016	0.0648662	FOXQ1.p2	AK037342|Zfp148|22661|zinc finger protein 148
mm9_v1_chr5_+_138462503_138462503	0.0647019	FOXQ1.p2	AJ245454|Smok3a|545814|sperm motility kinase 3A	NM_001168602|Smok3a|545814|sperm motility kinase 3A
mm9_v1_chr7_-_137409721_137409804	0.0639603	FOXQ1.p2	BC065069|Fgfr2|14183|fibroblast growth factor receptor 2	X55441|Fgfr2|14183|fibroblast growth factor receptor 2	BC072640|Fgfr2|14183|fibroblast growth factor receptor 2	M63503|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr10_+_45297632_45297737	0.0636801	FOXQ1.p2	NM_172473|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	AK156958|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	AK042879|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC120695|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	BC120697|Hace1|209462|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
mm9_v1_chr4_-_143802891_143802919	0.0636071	FOXQ1.p2	BC094895|C87977|97187|expressed sequence C87977	AK139502|C87977|97187|expressed sequence C87977	NM_001177542|C87977|97187|expressed sequence C87977
mm9_v1_chr15_+_59480204_59480213	0.0635113	FOXQ1.p2	AK033358|Trib1|211770|tribbles homolog 1 (Drosophila)	AK028626|Trib1|211770|tribbles homolog 1 (Drosophila)	AK040738|Trib1|211770|tribbles homolog 1 (Drosophila)	AK041212|Trib1|211770|tribbles homolog 1 (Drosophila)	AK162876|Trib1|211770|tribbles homolog 1 (Drosophila)	NM_144549|Trib1|211770|tribbles homolog 1 (Drosophila)
mm9_v1_chr7_+_30880094_30880209	0.0632156	FOXQ1.p2	BC085180|Zfp260|26466|zinc finger protein 260	NM_011981|Zfp260|26466|zinc finger protein 260	AK156219|Zfp260|26466|zinc finger protein 260
mm9_v1_chr16_-_13984713_13984713	0.0624361	FOXQ1.p2	AK017110|Ifitm7|74482|interferon induced transmembrane protein 7	NM_028968|Ifitm7|74482|interferon induced transmembrane protein 7
mm9_v1_chrX_-_101866402_101866402	0.0622859	FOXQ1.p2	AK132304|Zdhhc15|108672|zinc finger, DHHC domain containing 15	NM_175358|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr7_-_51808828_51809055	0.0615049	FOXQ1.p2	BC106148|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2	U09419|Nr1h2|22260|nuclear receptor subfamily 1, group H, member 2
mm9_v1_chr2_+_25719373_25719373	0.0614126	FOXQ1.p2	FJ628361|Kcnt1|227632|potassium channel, subfamily T, member 1	NM_001145403|Kcnt1|227632|potassium channel, subfamily T, member 1
mm9_v1_chr7_-_16457733_16457733	0.0596894	FOXQ1.p2	AK139691|Crx|12951|cone-rod homeobox containing gene	NM_001113330|Crx|12951|cone-rod homeobox containing gene
mm9_v1_chr17_+_41071633_41071710	0.0590883	FOXQ1.p2	NM_008650|Mut|17850|methylmalonyl-Coenzyme A mutase	BC019175|Mut|17850|methylmalonyl-Coenzyme A mutase	AK146309|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr3_-_51081421_51081435	0.0587247	FOXQ1.p2	AK088422|Elf2|69257|E74-like factor 2
mm9_v1_chr7_+_128061257_128061281	0.0586483	FOXQ1.p2	AK005034|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_001164096|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	NM_025298|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr3_+_27081918_27081998	0.0582505	FOXQ1.p2	AK128968|Nceh1|320024|arylacetamide deacetylase-like 1	AK038691|Nceh1|320024|arylacetamide deacetylase-like 1	AK045363|Nceh1|320024|arylacetamide deacetylase-like 1	AK085767|Nceh1|320024|arylacetamide deacetylase-like 1	NM_178772|Nceh1|320024|arylacetamide deacetylase-like 1	AK135837|Nceh1|320024|arylacetamide deacetylase-like 1	BC082569|Nceh1|320024|arylacetamide deacetylase-like 1	AK173158|Nceh1|320024|arylacetamide deacetylase-like 1	AK034339|Nceh1|320024|arylacetamide deacetylase-like 1
mm9_v1_chr7_-_52104448_52104476	0.0580114	FOXQ1.p2	BC017607|Tbc1d17|233204|TBC1 domain family, member 17	NM_001042655|Tbc1d17|233204|TBC1 domain family, member 17
mm9_v1_chr1_+_51346086_51346100	0.0578377	FOXQ1.p2	AK084096|Sdpr|20324|serum deprivation response
mm9_v1_chr11_-_105318037_105318048	0.0572934	FOXQ1.p2	AK132734|March10|632687|membrane-associated ring finger (C3HC4) 10	BC100474|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_001039242|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_172568|March10|632687|membrane-associated ring finger (C3HC4) 10
mm9_v1_chr11_-_86807135_86807208	0.057046	FOXQ1.p2	BC121190|Ypel2|77864|yippee-like 2 (Drosophila)	AK089126|Ypel2|77864|yippee-like 2 (Drosophila)	AK021387|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr18_-_60661144_60661295	0.0570036	FOXQ1.p2	BC012898|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AF313412|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK171923|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK170783|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK155873|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene	AK171810|2010002N04Rik|106878|RIKEN cDNA 2010002N04 gene
mm9_v1_chr9_+_110558996_110559065	0.0558043	FOXQ1.p2	AK012610|Ccdc12|72654|coiled-coil domain containing 12	NM_028312|Ccdc12|72654|coiled-coil domain containing 12	BC026668|Ccdc12|72654|coiled-coil domain containing 12
mm9_v1_chr5_-_124028994_124029065	0.0543537	FOXQ1.p2	AK003546|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr3_+_122122640_122122910	0.0538382	FOXQ1.p2	AK158241|Bcar3|29815|breast cancer anti-estrogen resistance 3	NM_013867|Bcar3|29815|breast cancer anti-estrogen resistance 3	BC023930|Bcar3|29815|breast cancer anti-estrogen resistance 3	AF179566|Bcar3|29815|breast cancer anti-estrogen resistance 3	AK167578|Bcar3|29815|breast cancer anti-estrogen resistance 3	AK143894|Bcar3|29815|breast cancer anti-estrogen resistance 3
mm9_v1_chr14_+_117324518_117324572	0.0538198	FOXQ1.p2	AK164668|Gpc6|23888|glypican 6	AK135442|Gpc6|23888|glypican 6	NM_001079844|Gpc6|23888|glypican 6	NM_011821|Gpc6|23888|glypican 6
mm9_v1_chr2_+_91570304_91570382	0.0532072	FOXQ1.p2	AK148887|Ambra1|228361|autophagy/beclin 1 regulator 1	AK084557|Ambra1|228361|autophagy/beclin 1 regulator 1	AK155513|Ambra1|228361|autophagy/beclin 1 regulator 1	AK037516|Ambra1|228361|autophagy/beclin 1 regulator 1	AK083596|Ambra1|228361|autophagy/beclin 1 regulator 1	AK169280|Ambra1|228361|autophagy/beclin 1 regulator 1	BC054082|Ambra1|228361|autophagy/beclin 1 regulator 1	BC032293|Ambra1|228361|autophagy/beclin 1 regulator 1
mm9_v1_chr7_-_97278443_97278523	0.0525384	FOXQ1.p2	AK019082|2310010J17Rik|78329|RIKEN cDNA 2310010J17 gene
mm9_v1_chr3_+_14886253_14886451	0.0518825	FOXQ1.p2	NM_009801|Car2|12349|carbonic anhydrase 2	U37705|Car2|12349|carbonic anhydrase 2
mm9_v1_chr9_-_77195596_77195676	0.0498734	FOXQ1.p2	AK009836|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	BC089626|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	AK081830|2810047F03Rik|72689|RIKEN cDNA 2810047F03 gene	BC131903|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	BC144730|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene	NM_027150|2310046A06Rik|69642|RIKEN cDNA 2310046A06 gene
mm9_v1_chr13_-_104968472_104968556	0.0497974	FOXQ1.p2	BC021756|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK084373|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK013956|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK167749|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK012141|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK010346|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK163342|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK149832|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093759|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093760|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_025879|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene
mm9_v1_chr4_-_155608885_155608924	0.049759	FOXQ1.p2	AK154523|Klhl17|231003|kelch-like 17 (Drosophila)	AK170825|Klhl17|231003|kelch-like 17 (Drosophila)	BC139309|Klhl17|231003|kelch-like 17 (Drosophila)	AK049214|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr9_+_110235804_110235881	0.0487602	FOXQ1.p2	AK150275|Scap|235623|SREBF chaperone	AK152478|Scap|235623|SREBF chaperone	AK153330|Scap|235623|SREBF chaperone	BC072633|Scap|235623|SREBF chaperone	BC070437|Scap|235623|SREBF chaperone	AK146658|Scap|235623|SREBF chaperone
mm9_v1_chr17_+_47027617_47027637	0.0482856	FOXQ1.p2	AK132036|Tbcc|72726|tubulin-specific chaperone C	AK012950|Tbcc|72726|tubulin-specific chaperone C	BC019476|Tbcc|72726|tubulin-specific chaperone C	BC083164|Tbcc|72726|tubulin-specific chaperone C
mm9_v1_chr3_+_3508029_3508207	0.048135	FOXQ1.p2	AK143816|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	NM_013920|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	AJ242626|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	BC125519|Hnf4g|30942|hepatocyte nuclear factor 4, gamma
mm9_v1_chr7_+_63305516_63305584	0.046907	FOXQ1.p2	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr7_-_77505248_77505478	0.0457454	FOXQ1.p2	X76653|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	U07635|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK140125|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	BC042484|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_009697|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr1_+_5073161_5073324	0.0454346	FOXQ1.p2	AK151659|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK034165|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK135137|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK152147|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK081492|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	BC009154|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	AK078767|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H	NM_133826|Atp6v1h|108664|ATPase, H+ transporting, lysosomal V1 subunit H
mm9_v1_chr4_+_57906588_57906598	0.0448567	FOXQ1.p2	AK081365|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr1_-_182123596_182123618	0.0446417	FOXQ1.p2	AJ278735|Adck3|67426|aarF domain containing kinase 3	NM_001163290|Adck3|67426|aarF domain containing kinase 3
mm9_v1_chr13_+_31650192_31650305	0.0440512	FOXQ1.p2	BC047155|Foxq1|15220|forkhead box Q1
mm9_v1_chr3_-_157694667_157694727	0.0430733	FOXQ1.p2	BC069945|Srsf11|69207|serine/arginine-rich splicing factor 11	BC021809|Srsf11|69207|serine/arginine-rich splicing factor 11	AK029394|Srsf11|69207|serine/arginine-rich splicing factor 11	BC002111|Srsf11|69207|serine/arginine-rich splicing factor 11	AK146719|Srsf11|69207|serine/arginine-rich splicing factor 11	AK002411|Srsf11|69207|serine/arginine-rich splicing factor 11	NM_001093753|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr5_-_123438517_123438541	0.0430239	FOXQ1.p2	NM_001005866|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr5_+_138478451_138478466	0.0429532	FOXQ1.p2	AK133180|Smok3b|622474|sperm motility kinase 3B	NM_001039889|Smok3b|622474|sperm motility kinase 3B	AJ245454|Smok3a|545814|sperm motility kinase 3A
mm9_v1_chr6_-_38238095_38238171	0.0422404	FOXQ1.p2	AK045178|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr4_+_118081908_118082012	0.0418979	FOXQ1.p2	AK011080|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_020000|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_173719|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK147032|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK005422|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK148025|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC051683|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK008759|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC021870|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AB041805|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm9_v1_chr4_-_43666412_43666469	0.0406745	FOXQ1.p2	AK132968|Spag8|433700|sperm associated antigen 8	AY769082|Spag8|433700|sperm associated antigen 8	NM_001007463|Spag8|433700|sperm associated antigen 8	BC150868|Spag8|433700|sperm associated antigen 8
mm9_v1_chr19_+_12752655_12752655	0.0401911	FOXQ1.p2	BC065104|Olfr1443|258693|olfactory receptor 1443	NM_146698|Olfr1443|258693|olfactory receptor 1443
mm9_v1_chr4_-_155608927_155608999	0.0396423	FOXQ1.p2	AY423764|Klhl17|231003|kelch-like 17 (Drosophila)	NM_198305|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr5_-_86802390_86802444	0.0387597	FOXQ1.p2	AF448809|Tmprss11d|231382|transmembrane protease, serine 11d	BC020151|Tmprss11d|231382|transmembrane protease, serine 11d	NM_145561|Tmprss11d|231382|transmembrane protease, serine 11d	AB053953|Tmprss11d|231382|transmembrane protease, serine 11d
mm9_v1_chr17_-_46462714_46462714	0.0385692	FOXQ1.p2	AF406642|Abcc10|224814|ATP-binding cassette, sub-family C (CFTR/MRP), member 10	NM_145140|Abcc10|224814|ATP-binding cassette, sub-family C (CFTR/MRP), member 10
mm9_v1_chr12_+_88943636_88943653	0.0374212	FOXQ1.p2	AK145346|Oog1|193322|oogenesin 1	AK087852|Oog1|193322|oogenesin 1	AK135749|Oog1|193322|oogenesin 1	AK143386|Oog1|193322|oogenesin 1	NM_178657|Oog1|193322|oogenesin 1	BC086484|Oog1|193322|oogenesin 1
mm9_v1_chr4_+_125181288_125181474	0.0369174	FOXQ1.p2	NM_008049|Ftl2|14337|ferritin light chain 2	AK145265|Ftl1|14325|ferritin light chain 1	AK213945|Gm15590|100270751|ferritin light chain 1 pseudogene	BC106145|Ftl1|14325|ferritin light chain 1	BC150761|Ftl2|14337|ferritin light chain 2	S89400|Ftl2|14337|ferritin light chain 2
mm9_v1_chr5_-_31522802_31522840	0.0362615	FOXQ1.p2	U42383|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chr7_-_139751384_139751389	0.0362144	FOXQ1.p2	AK190000|Oat|18242|ornithine aminotransferase	AK213292|Oat|18242|ornithine aminotransferase
mm9_v1_chr1_+_91351373_91351428	0.0361171	FOXQ1.p2	AK147503|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037136|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_178119|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK046523|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AK129289|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr19_+_6057884_6057982	0.0358089	FOXQ1.p2	NM_001160239|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	NM_007990|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK132752|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK002355|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK151211|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK151465|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK152738|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK168348|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	D26610|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK146359|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC062873|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	X65922|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	NM_001190436|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC058691|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC081463|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
mm9_v1_chr12_+_82049290_82049329	0.0354191	FOXQ1.p2	AK135336|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr3_-_129525375_129525422	0.0352571	FOXQ1.p2	BC046288|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK044717|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AF012271|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	AK021379|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog	NM_009102|Rrh|20132|retinal pigment epithelium derived rhodopsin homolog
mm9_v1_chr4_+_143689782_143689782	0.0349344	FOXQ1.p2	AK145585|Pramel4|347710|preferentially expressed antigen in melanoma like 4	BC132592|Gm13102|100041077|predicted gene 13102	BC132620|Gm13102|100041077|predicted gene 13102	NM_001085419|Gm13102|100041077|predicted gene 13102
mm9_v1_chr13_+_41012969_41013020	0.0341404	FOXQ1.p2	AY236875|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	NM_133219|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK019924|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	BC054845|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr8_-_89269823_89269841	0.033471	FOXQ1.p2	Z19579|Siah1a|20437|seven in absentia 1A
mm9_v1_chr2_-_163896796_163896916	0.0320813	FOXQ1.p2	BC018278|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK011786|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK168329|Tomm34|67145|translocase of outer mitochondrial membrane 34	NM_025996|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK017699|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK075873|Tomm34|67145|translocase of outer mitochondrial membrane 34
mm9_v1_chr7_-_30875415_30875528	0.0317453	FOXQ1.p2	BC019790|Zfp566|72556|zinc finger protein 566	AK012367|Zfp566|72556|zinc finger protein 566	NM_152814|Zfp566|72556|zinc finger protein 566
mm9_v1_chr16_+_44370127_44370136	0.0312	FOXQ1.p2	BC024956|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr5_-_123271207_123271281	0.0310488	FOXQ1.p2	AK152528|Anapc5|59008|anaphase-promoting complex subunit 5	BC010339|Anapc5|59008|anaphase-promoting complex subunit 5	AK013978|Anapc5|59008|anaphase-promoting complex subunit 5	AK031432|Anapc5|59008|anaphase-promoting complex subunit 5	AK168135|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr17_+_72022598_72022608	0.0307046	FOXQ1.p2	NM_177087|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr7_+_138175581_138175593	0.0305578	FOXQ1.p2	BC049835|Dmbt1|12945|deleted in malignant brain tumors 1	NM_007769|Dmbt1|12945|deleted in malignant brain tumors 1	U37438|Dmbt1|12945|deleted in malignant brain tumors 1	AB005909|Dmbt1|12945|deleted in malignant brain tumors 1
mm9_v1_chr2_+_174171943_174171964	0.0301431	FOXQ1.p2	
mm9_v1_chr1_-_18127131_18127131	0.0292452	FOXQ1.p2	AY705449|Crisp4|78081|cysteine-rich secretory protein 4	NM_030033|Crisp4|78081|cysteine-rich secretory protein 4
mm9_v1_chr19_+_10280522_10280595	0.0290418	FOXQ1.p2	NM_001163431|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	BC058335|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene
mm9_v1_chr3_+_136333251_136333262	0.0272658	FOXQ1.p2	AK166287|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr1_+_55188086_55188145	0.0272054	FOXQ1.p2	NM_025283|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK162327|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK147857|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK020446|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC028500|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC037499|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC058168|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC052475|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	U01138|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)
mm9_v1_chr4_+_122731563_122731731	0.0271654	FOXQ1.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr2_-_91019477_91019477	0.0267813	FOXQ1.p2	NM_001177720|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr11_-_69619087_69619125	0.0267589	FOXQ1.p2	BC144871|Tmem102|380705|transmembrane protein 102	AK143262|Tmem102|380705|transmembrane protein 102	NM_001033433|Tmem102|380705|transmembrane protein 102
mm9_v1_chr15_-_93228666_93228789	0.0264332	FOXQ1.p2	AK042283|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	BC058368|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012852|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	NM_026025|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK170136|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AK012589|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1	AB095989|Zcrb1|67197|zinc finger CCHC-type and RNA binding motif 1
mm9_v1_chr19_-_40588219_40588234	0.0244485	FOXQ1.p2	AK087553|Sorbs1|20411|sorbin and SH3 domain containing 1	NM_178362|Sorbs1|20411|sorbin and SH3 domain containing 1	BC012703|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr15_+_75098850_75098850	0.0240636	FOXQ1.p2	NM_008530|Ly6f|17071|lymphocyte antigen 6 complex, locus F
mm9_v1_chr10_+_34203204_34203369	0.0225665	FOXQ1.p2	BC007137|Frk|14302|fyn-related kinase	AK166379|Frk|14302|fyn-related kinase	NM_001159544|Frk|14302|fyn-related kinase	NM_010237|Frk|14302|fyn-related kinase	AK028855|Frk|14302|fyn-related kinase	L36132|Frk|14302|fyn-related kinase	AK052614|Frk|14302|fyn-related kinase	AK077264|Frk|14302|fyn-related kinase	Z48757|Frk|14302|fyn-related kinase	AK085191|Frk|14302|fyn-related kinase
mm9_v1_chr7_+_136735365_136735478	0.0221936	FOXQ1.p2	NM_172255|Wdr11|207425|WD repeat domain 11	AK166369|Wdr11|207425|WD repeat domain 11	AK170058|Wdr11|207425|WD repeat domain 11	BC037177|Wdr11|207425|WD repeat domain 11
mm9_v1_chr10_-_127807092_127807092	0.0216238	FOXQ1.p2	NM_001081040|Coq10a|210582|coenzyme Q10 homolog A (yeast)
mm9_v1_chr1_+_66747396_66747477	0.0214794	FOXQ1.p2	AK150008|Rpe|66646|ribulose-5-phosphate-3-epimerase	BC019126|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK029088|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK007735|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK017774|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK088152|Rpe|66646|ribulose-5-phosphate-3-epimerase	NM_025683|Rpe|66646|ribulose-5-phosphate-3-epimerase	Z78161|Rpe|66646|ribulose-5-phosphate-3-epimerase	BC006953|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK185217|Rpe|66646|ribulose-5-phosphate-3-epimerase	AK193547|Rpe|66646|ribulose-5-phosphate-3-epimerase
mm9_v1_chr6_-_130017189_130017288	0.0213591	FOXQ1.p2	NM_010649|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	U10090|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4	BC111866|Klra18|93970|killer cell lectin-like receptor, subfamily A, member 18	AF288377|Klra18|93970|killer cell lectin-like receptor, subfamily A, member 18	NM_053153|Klra18|93970|killer cell lectin-like receptor, subfamily A, member 18	AK080171|Klra4|16635|killer cell lectin-like receptor, subfamily A, member 4
mm9_v1_chr8_-_74998992_74999131	0.0209283	FOXQ1.p2	BC032191|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK144328|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AF536541|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK049765|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK017525|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	BC020488|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	NM_138585|Cherp|27967|calcium homeostasis endoplasmic reticulum protein
mm9_v1_chr10_-_51310190_51310285	0.020924	FOXQ1.p2	BC147085|Fam162b|77296|family with sequence similarity 162, member B	BC147086|Fam162b|77296|family with sequence similarity 162, member B	NM_029894|Fam162b|77296|family with sequence similarity 162, member B	AK020485|Fam162b|77296|family with sequence similarity 162, member B
mm9_v1_chr18_+_60371711_60371757	0.0196853	FOXQ1.p2	AK149556|Gm4951|240327|predicted gene 4951	NM_001033767|Gm4951|240327|predicted gene 4951	AK149583|Gm4951|240327|predicted gene 4951
mm9_v1_chr4_+_122513481_122513506	0.018949	FOXQ1.p2	AK151107|Ppt1|19063|palmitoyl-protein thioesterase 1	AK152940|Ppt1|19063|palmitoyl-protein thioesterase 1	NM_008917|Ppt1|19063|palmitoyl-protein thioesterase 1	AK152474|Ppt1|19063|palmitoyl-protein thioesterase 1	AK014561|Ppt1|19063|palmitoyl-protein thioesterase 1	AK153106|Ppt1|19063|palmitoyl-protein thioesterase 1	AK153316|Ppt1|19063|palmitoyl-protein thioesterase 1	AK171668|Ppt1|19063|palmitoyl-protein thioesterase 1	AF087568|Ppt1|19063|palmitoyl-protein thioesterase 1	AK169658|Ppt1|19063|palmitoyl-protein thioesterase 1	AK151055|Ppt1|19063|palmitoyl-protein thioesterase 1	AK148314|Ppt1|19063|palmitoyl-protein thioesterase 1	AF326557|Ppt1|19063|palmitoyl-protein thioesterase 1	AF326558|Ppt1|19063|palmitoyl-protein thioesterase 1	AK169579|Ppt1|19063|palmitoyl-protein thioesterase 1
mm9_v1_chr5_-_135382602_135382602	0.0185179	FOXQ1.p2	AK007170|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369079|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369080|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	BC114542|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_029681|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_194065|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)
mm9_v1_chr16_-_29378636_29378817	0.0179305	FOXQ1.p2	AK158355|Atp13a5|268878|ATPase type 13A5	BC115739|Atp13a5|268878|ATPase type 13A5	AK083102|Atp13a5|268878|ATPase type 13A5	AK083121|Atp13a5|268878|ATPase type 13A5	NM_175650|Atp13a5|268878|ATPase type 13A5
mm9_v1_chr8_-_71601126_71601131	0.016217	FOXQ1.p2	AK076433|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	AK144034|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr7_-_126602780_126602785	0.0154452	FOXQ1.p2	BC119573|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009323|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009843|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009661|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	NM_025989|Gp2|67133|glycoprotein 2 (zymogen granule membrane)
mm9_v1_chr6_-_38249209_38249350	0.0150032	FOXQ1.p2	AK084475|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK045287|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK051064|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	NM_172467|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138180|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138181|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr7_+_86418082_86418112	0.014414	FOXQ1.p2	AK153642|Abhd2|54608|abhydrolase domain containing 2
mm9_v1_chr10_-_114799212_114799324	0.0143654	FOXQ1.p2	AK136778|Tmem19|67226|transmembrane protein 19	AK170143|Tmem19|67226|transmembrane protein 19	AK171087|Tmem19|67226|transmembrane protein 19	AK018383|Tmem19|67226|transmembrane protein 19	AK155275|Tmem19|67226|transmembrane protein 19	AK042426|Tmem19|67226|transmembrane protein 19	AK079735|Tmem19|67226|transmembrane protein 19	BC016895|Tmem19|67226|transmembrane protein 19	AK036228|Tmem19|67226|transmembrane protein 19	AK138931|Tmem19|67226|transmembrane protein 19	NM_133683|Tmem19|67226|transmembrane protein 19	AK034298|Tmem19|67226|transmembrane protein 19
mm9_v1_chr5_-_100929644_100929677	0.0127515	FOXQ1.p2	AK220225|Lin54|231506|lin-54 homolog (C. elegans)	AK134320|Lin54|231506|lin-54 homolog (C. elegans)	AK029288|Lin54|231506|lin-54 homolog (C. elegans)	NM_172714|Lin54|231506|lin-54 homolog (C. elegans)
mm9_v1_chr3_+_89222458_89222496	0.0126905	FOXQ1.p2	NM_011368|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr7_-_15208414_15208414	0.0123964	FOXQ1.p2	AK140342|Vmn1r90|627280|vomeronasal 1 receptor 90	NM_001039146|Vmn1r90|627280|vomeronasal 1 receptor 90
mm9_v1_chr11_+_97660946_97661134	0.0121349	FOXQ1.p2	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr13_-_38085986_38086062	0.0116813	FOXQ1.p2	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr14_-_121904465_121904475	0.0115245	FOXQ1.p2	BC116248|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	BC116249|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	AF205540|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	AK136428|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1	NM_053079|Slc15a1|56643|solute carrier family 15 (oligopeptide transporter), member 1
mm9_v1_chr5_-_65726802_65726885	0.0113402	FOXQ1.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr13_-_21384553_21384554	0.0107364	FOXQ1.p2	AK029731|Gpx5|14780|glutathione peroxidase 5	BC100749|Gpx5|14780|glutathione peroxidase 5	BC103588|Gpx5|14780|glutathione peroxidase 5	BC103589|Gpx5|14780|glutathione peroxidase 5	BC105648|Gpx5|14780|glutathione peroxidase 5	NM_010343|Gpx5|14780|glutathione peroxidase 5
mm9_v1_chr18_+_53624169_53624199	0.0105375	FOXQ1.p2	BC139295|Prdm6|225518|PR domain containing 6	AK133910|Prdm6|225518|PR domain containing 6	NM_001033281|Prdm6|225518|PR domain containing 6
mm9_v1_chr19_-_8788307_8788398	0.010164	FOXQ1.p2	X14309|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AB023408|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	U25708|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	BC065173|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK090046|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK165550|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	AK165417|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	NM_008577|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr10_-_116675657_116675663	0.0093997	FOXQ1.p2	BC120771|9530003J23Rik|77397|RIKEN cDNA 9530003J23 gene	BC120797|9530003J23Rik|77397|RIKEN cDNA 9530003J23 gene	AK020538|9530003J23Rik|77397|RIKEN cDNA 9530003J23 gene	AK035427|9530003J23Rik|77397|RIKEN cDNA 9530003J23 gene
mm9_v1_chr7_-_14840218_14840218	0.00925321	FOXQ1.p2	BC147210|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	BC172008|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	NM_001081325|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
mm9_v1_chr4_+_139178802_139178820	0.00879064	FOXQ1.p2	BC060650|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1	NM_175438|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr14_-_67487226_67487503	0.00847147	FOXQ1.p2	Y10339|Dpysl2|12934|dihydropyrimidinase-like 2	X87242|Dpysl2|12934|dihydropyrimidinase-like 2	BC062955|Dpysl2|12934|dihydropyrimidinase-like 2	NM_009955|Dpysl2|12934|dihydropyrimidinase-like 2
mm9_v1_chr1_+_51346108_51346149	0.00760849	FOXQ1.p2	S67386|Sdpr|20324|serum deprivation response	BC020008|Sdpr|20324|serum deprivation response
mm9_v1_chr1_+_135142673_135142702	0.00744397	FOXQ1.p2	NM_001160268|Plekha6|240753|pleckstrin homology domain containing, family A member 6	NM_182930|Plekha6|240753|pleckstrin homology domain containing, family A member 6	BC054547|Plekha6|240753|pleckstrin homology domain containing, family A member 6	AK173074|Plekha6|240753|pleckstrin homology domain containing, family A member 6
mm9_v1_chr17_+_19051285_19051285	0.00706274	FOXQ1.p2	NM_001104549|Vmn2r97|627367|vomeronasal 2, receptor 97
mm9_v1_chr5_-_130214385_130214385	0.00696203	FOXQ1.p2	NM_028826|Sept14|74222|septin 14
mm9_v1_chr6_+_41901626_41901631	0.00688693	FOXQ1.p2	NM_027832|Sval1|71578|seminal vesicle antigen-like 1	AK018661|Sval1|71578|seminal vesicle antigen-like 1	BC114422|Sval1|71578|seminal vesicle antigen-like 1
mm9_v1_chr8_+_74446723_74446817	0.00674006	FOXQ1.p2	NM_133358|Zfp617|170938|zinc finger protein 617	AK143880|Zfp617|170938|zinc finger protein 617	AB020542|Zfp617|170938|zinc finger protein 617	AK146644|Zfp617|170938|zinc finger protein 617	BC014712|Zfp617|170938|zinc finger protein 617
mm9_v1_chr7_-_149482973_149482973	0.00670391	FOXQ1.p2	BC104355|Krtap5-1|50774|keratin associated protein 5-1	NM_015808|Krtap5-1|50774|keratin associated protein 5-1
mm9_v1_chr3_+_136333670_136333672	0.00663072	FOXQ1.p2	AK150393|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr4_-_25208902_25208983	0.00605257	FOXQ1.p2	AK032663|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC058809|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK129211|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK007993|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK076206|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC132195|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC138153|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	AK132697|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC080203|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	BC099529|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene	NM_026194|1810074P20Rik|67490|RIKEN cDNA 1810074P20 gene
mm9_v1_chr3_+_14641726_14641789	0.00563247	FOXQ1.p2	AK162621|Car13|71934|carbonic anhydrase 13	NM_024495|Car13|71934|carbonic anhydrase 13	AK153080|Car13|71934|carbonic anhydrase 13	AK153353|Car13|71934|carbonic anhydrase 13	AK010166|Car13|71934|carbonic anhydrase 13	AK150871|Car13|71934|carbonic anhydrase 13	AK150897|Car13|71934|carbonic anhydrase 13	AK151978|Car13|71934|carbonic anhydrase 13	BC064050|Car13|71934|carbonic anhydrase 13	AF231123|Car13|71934|carbonic anhydrase 13	AK152124|Car13|71934|carbonic anhydrase 13	AK153258|Car13|71934|carbonic anhydrase 13	AK151519|Car13|71934|carbonic anhydrase 13
mm9_v1_chr16_-_26755585_26755590	0.00461063	FOXQ1.p2	
mm9_v1_chr15_+_9209583_9209621	0.00412146	FOXQ1.p2	NM_207216|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1	AK143745|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1	AK128903|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1	BC025940|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1
mm9_v1_chr6_-_39369941_39369948	0.0037327	FOXQ1.p2	AK005137|Mkrn1|54484|makorin, ring finger protein, 1
mm9_v1_chr2_-_118305356_118305444	0.0023745	FOXQ1.p2	M29264|Srp14|20813|signal recognition particle 14	AK156845|Srp14|20813|signal recognition particle 14	AK167821|Srp14|20813|signal recognition particle 14	BC021537|Srp14|20813|signal recognition particle 14	AK168144|Srp14|20813|signal recognition particle 14	AK019310|Srp14|20813|signal recognition particle 14	NM_009273|Srp14|20813|signal recognition particle 14
mm9_v1_chr1_+_97210162_97210393	0.00232034	FOXQ1.p2	BC021428|Fam174a|67698|family with sequence similarity 174, member A	AK084861|Fam174a|67698|family with sequence similarity 174, member A	NM_026321|Fam174a|67698|family with sequence similarity 174, member A	AK009797|Fam174a|67698|family with sequence similarity 174, member A	AK017318|Fam174a|67698|family with sequence similarity 174, member A	AK009892|Fam174a|67698|family with sequence similarity 174, member A	AK020633|Fam174a|67698|family with sequence similarity 174, member A	AK148807|Fam174a|67698|family with sequence similarity 174, member A	AK033948|Fam174a|67698|family with sequence similarity 174, member A	AB154249|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr5_-_30848154_30848208	0.00184112	FOXQ1.p2	BC099558|Cib4|73259|calcium and integrin binding family member 4	BC118938|Cib4|73259|calcium and integrin binding family member 4	AK006670|Cib4|73259|calcium and integrin binding family member 4	NM_028483|Cib4|73259|calcium and integrin binding family member 4
mm9_v1_chr17_+_3115197_3115372	0.00144187	FOXQ1.p2	AK171078|Scaf8|106583|SR-related CTD-associated factor 8	AK050652|Scaf8|106583|SR-related CTD-associated factor 8	BC038363|Scaf8|106583|SR-related CTD-associated factor 8	AK207242|Scaf8|106583|SR-related CTD-associated factor 8	AK211575|Scaf8|106583|SR-related CTD-associated factor 8	AK213588|Scaf8|106583|SR-related CTD-associated factor 8	AK213688|Scaf8|106583|SR-related CTD-associated factor 8	AK218304|Scaf8|106583|SR-related CTD-associated factor 8	AK215751|Scaf8|106583|SR-related CTD-associated factor 8
mm9_v1_chr10_+_38685424_38685646	0.00117029	FOXQ1.p2	AK054014|Lama4|16775|laminin, alpha 4	AK032825|Lama4|16775|laminin, alpha 4	AK145237|Lama4|16775|laminin, alpha 4	Y09827|Lama4|16775|laminin, alpha 4	AK085945|Lama4|16775|laminin, alpha 4	U59865|Lama4|16775|laminin, alpha 4	BC115942|Lama4|16775|laminin, alpha 4
mm9_v1_chr5_+_88237145_88237179	0.000948815	FOXQ1.p2	AK164767|Csn1s2b|12992|casein alpha s2-like B	AK085744|Csn1s2b|12992|casein alpha s2-like B	NM_009973|Csn1s2b|12992|casein alpha s2-like B	AK164763|Csn1s2b|12992|casein alpha s2-like B	AK021343|Csn1s2b|12992|casein alpha s2-like B	AK052780|Csn1s2b|12992|casein alpha s2-like B	AK052789|Csn1s2b|12992|casein alpha s2-like B	AK085747|Csn1s2b|12992|casein alpha s2-like B	AK164768|Csn1s2b|12992|casein alpha s2-like B	AK021337|Csn1s2b|12992|casein alpha s2-like B	AK164795|Csn1s2b|12992|casein alpha s2-like B	BC002084|Csn1s2b|12992|casein alpha s2-like B	J00379|Csn1s2b|12992|casein alpha s2-like B	V00740|Csn1s2b|12992|casein alpha s2-like B
mm9_v1_chr10_+_73284612_73284690	0.000600718	FOXQ1.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr14_+_55506625_55506792	0.000589791	FOXQ1.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
