mm9_v1_chr18_-_25912453_25912483	3.24745	GAUAUGU	AK161918|Celf4|108013|CUGBP, Elav-like family member 4	BC048405|Celf4|108013|CUGBP, Elav-like family member 4	BC052744|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146292|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146293|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146294|Celf4|108013|CUGBP, Elav-like family member 4	NM_001146295|Celf4|108013|CUGBP, Elav-like family member 4	NM_001174074|Celf4|108013|CUGBP, Elav-like family member 4	NM_133195|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chrX_+_80194208_80194241	2.43729	GAUAUGU	AK052856|Dmd|13405|dystrophin, muscular dystrophy	NM_007868|Dmd|13405|dystrophin, muscular dystrophy	M68859|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr6_-_149050201_149050210	2.03182	GAUAUGU	NM_177192|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr1_-_25886551_25886551	1.84995	GAUAUGU	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr18_-_16967557_16967557	1.69303	GAUAUGU	NM_007664|Cdh2|12558|cadherin 2
mm9_v1_chr14_-_124591742_124591767	1.64611	GAUAUGU	U66204|Fgf14|14169|fibroblast growth factor 14	NM_010201|Fgf14|14169|fibroblast growth factor 14
mm9_v1_chr14_-_125076242_125076348	1.57801	GAUAUGU	BC107003|Fgf14|14169|fibroblast growth factor 14	BC107004|Fgf14|14169|fibroblast growth factor 14	AK079100|Fgf14|14169|fibroblast growth factor 14	NM_207667|Fgf14|14169|fibroblast growth factor 14
mm9_v1_chr13_+_118391126_118391233	1.48801	GAUAUGU	AK158322|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1	NM_010408|Hcn1|15165|hyperpolarization-activated, cyclic nucleotide-gated K+ 1
mm9_v1_chr12_+_79327630_79327650	1.44501	GAUAUGU	AK144569|Gphn|268566|gephyrin	NM_145965|Gphn|268566|gephyrin	NM_172952|Gphn|268566|gephyrin
mm9_v1_chr13_+_54472705_54472742	1.24166	GAUAUGU	NM_009946|Cplx2|12890|complexin 2
mm9_v1_chr11_+_117515548_117515602	1.21472	GAUAUGU	NM_198022|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr3_-_26052228_26052228	1.1949	GAUAUGU	BC098461|Nlgn1|192167|neuroligin 1	NM_001163387|Nlgn1|192167|neuroligin 1
mm9_v1_chr3_-_26230791_26230830	1.15525	GAUAUGU	AK083116|Nlgn1|192167|neuroligin 1	AK122433|Nlgn1|192167|neuroligin 1	NM_138666|Nlgn1|192167|neuroligin 1
mm9_v1_chr1_-_21952022_21952022	1.07442	GAUAUGU	AK147264|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5	NM_001160139|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5	NM_023872|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5
mm9_v1_chr3_+_133903056_133903111	1.02094	GAUAUGU	NM_001004367|Cxxc4|319478|CXXC finger 4
mm9_v1_chr2_-_37502738_37502804	0.936692	GAUAUGU	X84692|Strbp|20744|spermatid perinuclear RNA binding protein	NM_009261|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr9_+_74918979_74919024	0.876764	GAUAUGU	AK032713|Myo5a|17918|myosin VA	NM_010864|Myo5a|17918|myosin VA
mm9_v1_chr4_+_13711928_13711928	0.799352	GAUAUGU	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr14_-_31304341_31304341	0.733963	GAUAUGU	AJ437292|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_028981|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr15_+_88890140_88890179	0.687329	GAUAUGU	NM_001002005|Panx2|406218|pannexin 2	EU446266|Panx2|406218|pannexin 2
mm9_v1_chr4_+_13670425_13670448	0.627247	GAUAUGU	AK142006|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001111026|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr5_-_36928872_36928874	0.542601	GAUAUGU	AK131724|Tbc1d14|100855|TBC1 domain family, member 14	AK029986|Tbc1d14|100855|TBC1 domain family, member 14	NM_001113362|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr2_-_153270059_153270214	0.528283	GAUAUGU	BC079552|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK157863|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	AK139459|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001001986|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
mm9_v1_chr8_+_63134353_63134353	0.493074	GAUAUGU	AK016959|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_001177882|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr15_-_11925724_11925789	0.444824	GAUAUGU	J03750|Sub1|20024|SUB1 homolog (S. cerevisiae)	BC010967|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK146335|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK154114|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK049260|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK132021|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK151734|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK048371|Sub1|20024|SUB1 homolog (S. cerevisiae)	NM_011294|Sub1|20024|SUB1 homolog (S. cerevisiae)
mm9_v1_chr14_-_31166671_31166671	0.42354	GAUAUGU	AK147415|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit	NM_001083616|Cacna1d|12289|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm9_v1_chr2_-_5635547_5635807	0.418314	GAUAUGU	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr8_+_63133900_63133900	0.410401	GAUAUGU	AK133407|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_001177881|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr11_+_116976475_116976498	0.393234	GAUAUGU	AK047396|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166506|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166507|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_028777|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr4_-_82151180_82151288	0.38836	GAUAUGU	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr1_-_145624156_145624181	0.386015	GAUAUGU	AK076167|Trove2|20822|TROVE domain family, member 2	NM_013835|Trove2|20822|TROVE domain family, member 2
mm9_v1_chr9_+_59426108_59426143	0.37831	GAUAUGU	BC052406|Celf6|76183|CUGBP, Elav-like family member 6	NM_175235|Celf6|76183|CUGBP, Elav-like family member 6
mm9_v1_chr5_-_36925021_36925045	0.350426	GAUAUGU	BC042515|Tbc1d14|100855|TBC1 domain family, member 14	NM_133910|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr17_-_56615875_56615935	0.346659	GAUAUGU	NM_011218|Ptprs|19280|protein tyrosine phosphatase, receptor type, S
mm9_v1_chr16_-_28929698_28929810	0.338249	GAUAUGU	BC085092|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	BC068245|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	NM_177718|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene
mm9_v1_chr18_+_69505374_69505487	0.323847	GAUAUGU	NM_001083967|Tcf4|21413|transcription factor 4	AK081012|Tcf4|21413|transcription factor 4	AK145285|Tcf4|21413|transcription factor 4	AK028748|Tcf4|21413|transcription factor 4	S75870|Tcf4|21413|transcription factor 4
mm9_v1_chr8_+_63111621_63111675	0.315393	GAUAUGU	AK089654|Mfap3l|71306|microfibrillar-associated protein 3-like	NM_027756|Mfap3l|71306|microfibrillar-associated protein 3-like	BC095950|Mfap3l|71306|microfibrillar-associated protein 3-like
mm9_v1_chr5_-_36873134_36873271	0.31005	GAUAUGU	AB064521|Tbc1d14|100855|TBC1 domain family, member 14	BC011420|Tbc1d14|100855|TBC1 domain family, member 14	AK013092|Tbc1d14|100855|TBC1 domain family, member 14	NM_001113364|Tbc1d14|100855|TBC1 domain family, member 14
mm9_v1_chr4_+_97444312_97444317	0.29368	GAUAUGU	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr6_+_14851348_14851478	0.238537	GAUAUGU	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr18_+_69504145_69504185	0.222763	GAUAUGU	AK051958|Tcf4|21413|transcription factor 4	NM_013685|Tcf4|21413|transcription factor 4	U16322|Tcf4|21413|transcription factor 4
mm9_v1_chr3_-_108003697_108003757	0.213444	GAUAUGU	AK087683|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC060107|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC137590|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_001081320|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_028061|Cyb561d1|72023|cytochrome b-561 domain containing 1	AK164441|Cyb561d1|72023|cytochrome b-561 domain containing 1
mm9_v1_chr13_+_83643032_83643032	0.198131	GAUAUGU	NM_001170537|Mef2c|17260|myocyte enhancer factor 2C	NM_025282|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chrX_-_138159759_138159833	0.197488	GAUAUGU	BC060235|Irs4|16370|insulin receptor substrate 4	NM_010572|Irs4|16370|insulin receptor substrate 4	BC150782|Irs4|16370|insulin receptor substrate 4
mm9_v1_chr15_+_80629020_80629144	0.197243	GAUAUGU	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr6_+_15135505_15135508	0.191804	GAUAUGU	BC062926|Foxp2|114142|forkhead box P2	NM_212435|Foxp2|114142|forkhead box P2	BC058960|Foxp2|114142|forkhead box P2
mm9_v1_chr4_+_32504409_32504501	0.162829	GAUAUGU	NM_001109661|Bach2|12014|BTB and CNC homology 2	BC131642|Bach2|12014|BTB and CNC homology 2
mm9_v1_chr7_+_130267398_130267398	0.110976	GAUAUGU	NM_144925|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr5_+_122734363_122734418	0.104109	GAUAUGU	AK135118|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK083481|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK078914|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	BC068149|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	NM_177242|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)
mm9_v1_chr14_+_47621014_47621039	0.0704458	GAUAUGU	AK006299|Samd4|74480|sterile alpha motif domain containing 4	NM_001163433|Samd4|74480|sterile alpha motif domain containing 4	AK161277|Samd4|74480|sterile alpha motif domain containing 4	AK018954|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr14_+_69647294_69647485	0.0226869	GAUAUGU	AF099098|Stc1|20855|stanniocalcin 1	BC021425|Stc1|20855|stanniocalcin 1	AK134260|Stc1|20855|stanniocalcin 1	NM_009285|Stc1|20855|stanniocalcin 1	AK142220|Stc1|20855|stanniocalcin 1	AK149293|Stc1|20855|stanniocalcin 1	AK149351|Stc1|20855|stanniocalcin 1	AK161960|Stc1|20855|stanniocalcin 1
mm9_v1_chr4_+_13678443_13678575	0.0216609	GAUAUGU	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr17_-_47147441_47147496	0.0178343	GAUAUGU	BC075642|Ubr2|224826|ubiquitin protein ligase E3 component n-recognin 2	AK147445|Ubr2|224826|ubiquitin protein ligase E3 component n-recognin 2	AK143202|Ubr2|224826|ubiquitin protein ligase E3 component n-recognin 2	NM_001177374|Ubr2|224826|ubiquitin protein ligase E3 component n-recognin 2	NM_146078|Ubr2|224826|ubiquitin protein ligase E3 component n-recognin 2
mm9_v1_chr2_-_153355706_153355706	0.0152263	GAUAUGU	AK147524|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene	NM_001134300|8430427H17Rik|329540|RIKEN cDNA 8430427H17 gene
