mm9_v1_chr1_+_138027943_138028013	15.6521	GGCUCAG	NM_001039472|Kif21b|16565|kinesin family member 21B
mm9_v1_chr3_-_88265103_88265103	13.9312	GGCUCAG	NM_001163489|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	X85991|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr3_-_88262805_88262805	13.9142	GGCUCAG	NM_001163491|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr7_+_129432585_129432762	13.9028	GGCUCAG	NM_008855|Prkcb|18751|protein kinase C, beta	AK051862|Prkcb|18751|protein kinase C, beta
mm9_v1_chr3_-_88259682_88259708	13.3321	GGCUCAG	NM_013658|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr3_-_88262982_88263022	13.2087	GGCUCAG	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr4_-_43591721_43591766	11.8796	GGCUCAG	AK173213|Gba2|230101|glucosidase beta 2	AK158174|Gba2|230101|glucosidase beta 2	NM_172692|Gba2|230101|glucosidase beta 2
mm9_v1_chr1_-_162281701_162281701	11.711	GGCUCAG	AK147634|Rabgap1l|29809|RAB GTPase activating protein 1-like	NM_001038621|Rabgap1l|29809|RAB GTPase activating protein 1-like
mm9_v1_chr2_+_158492468_158492468	10.1423	GGCUCAG	NM_153089|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr2_-_169956719_169956719	10.0974	GGCUCAG	AK156475|Zfp217|228913|zinc finger protein 217	NM_001033299|Zfp217|228913|zinc finger protein 217
mm9_v1_chr11_-_52095745_52095751	9.76382	GGCUCAG	BC138596|Tcf7|21414|transcription factor 7, T-cell specific	BC145343|Tcf7|21414|transcription factor 7, T-cell specific	AK037616|Tcf7|21414|transcription factor 7, T-cell specific	NM_009331|Tcf7|21414|transcription factor 7, T-cell specific
mm9_v1_chr6_-_91066809_91066837	9.48964	GGCUCAG	AK157272|Nup210|54563|nucleoporin 210	BC052468|Nup210|54563|nucleoporin 210	AK053417|Nup210|54563|nucleoporin 210	NM_018815|Nup210|54563|nucleoporin 210
mm9_v1_chr2_-_169968174_169968177	9.07197	GGCUCAG	AK139547|Zfp217|228913|zinc finger protein 217	NM_001159683|Zfp217|228913|zinc finger protein 217	AK163381|Zfp217|228913|zinc finger protein 217
mm9_v1_chr16_+_44173356_44173509	8.3801	GGCUCAG	NM_001029889|Gm608|207806|predicted gene 608
mm9_v1_chrX_+_104451216_104451366	8.34756	GGCUCAG	AK171832|Gpr174|213439|G protein-coupled receptor 174	NM_001177781|Gpr174|213439|G protein-coupled receptor 174	AK156069|Gpr174|213439|G protein-coupled receptor 174	AK153611|Gpr174|213439|G protein-coupled receptor 174	NM_001033251|Gpr174|213439|G protein-coupled receptor 174
mm9_v1_chr3_+_103083215_103083215	7.5004	GGCUCAG	AY458590|Trim33|94093|tripartite motif-containing 33	NM_001079830|Trim33|94093|tripartite motif-containing 33	NM_053170|Trim33|94093|tripartite motif-containing 33
mm9_v1_chrX_+_104479684_104479684	7.48922	GGCUCAG	NM_001177782|Gpr174|213439|G protein-coupled receptor 174
mm9_v1_chr11_+_69749297_69749476	7.2009	GGCUCAG	BC141112|Ybx2|53422|Y box protein 2	BC100454|Ybx2|53422|Y box protein 2	NM_016875|Ybx2|53422|Y box protein 2	AK131786|Ybx2|53422|Y box protein 2	AF073954|Ybx2|53422|Y box protein 2
mm9_v1_chr16_+_19760300_19760490	7.1975	GGCUCAG	AK037166|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK083839|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159407|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_001159408|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	NM_054052|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK032911|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK048010|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	BC063076|B3gnt5|108105|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm9_v1_chr15_-_98638348_98638375	7.18718	GGCUCAG	AK158894|Ddn|13199|dendrin	NM_001013741|Ddn|13199|dendrin
mm9_v1_chr15_+_74545268_74545281	7.06629	GGCUCAG	AK008851|Psca|72373|prostate stem cell antigen	BC110462|Psca|72373|prostate stem cell antigen	NM_028216|Psca|72373|prostate stem cell antigen	AF319173|Psca|72373|prostate stem cell antigen
mm9_v1_chr1_+_59030365_59030647	6.68045	GGCUCAG	AK140272|Stradb|227154|STE20-related kinase adaptor beta	NM_172656|Stradb|227154|STE20-related kinase adaptor beta	AK036678|Stradb|227154|STE20-related kinase adaptor beta	BC055814|Stradb|227154|STE20-related kinase adaptor beta	AK046790|Stradb|227154|STE20-related kinase adaptor beta	AK080096|Stradb|227154|STE20-related kinase adaptor beta	AK035207|Stradb|227154|STE20-related kinase adaptor beta	AK086974|Stradb|227154|STE20-related kinase adaptor beta	BC037003|Stradb|227154|STE20-related kinase adaptor beta	BC060956|Stradb|227154|STE20-related kinase adaptor beta	AK146079|Stradb|227154|STE20-related kinase adaptor beta	AB057666|Stradb|227154|STE20-related kinase adaptor beta	AB057667|Stradb|227154|STE20-related kinase adaptor beta
mm9_v1_chr11_+_68912444_68912492	6.67541	GGCUCAG	NM_011065|Per1|18626|period homolog 1 (Drosophila)	BC091645|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr3_+_87650676_87650676	6.57798	GGCUCAG	AF203343|Sh2d2a|27371|SH2 domain protein 2A	NM_001025571|Sh2d2a|27371|SH2 domain protein 2A	NM_021309|Sh2d2a|27371|SH2 domain protein 2A
mm9_v1_chr19_+_23833310_23833547	6.46099	GGCUCAG	NM_177034|Apba1|319924|amyloid beta (A4) precursor protein binding, family A, member 1	AK147583|Apba1|319924|amyloid beta (A4) precursor protein binding, family A, member 1	AK147623|Apba1|319924|amyloid beta (A4) precursor protein binding, family A, member 1	BC141181|Apba1|319924|amyloid beta (A4) precursor protein binding, family A, member 1
mm9_v1_chr10_+_59809598_59809683	6.33694	GGCUCAG	NM_001159572|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	NM_028732|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK079734|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK170059|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK032383|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK159086|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK159864|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK163118|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK170419|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK171045|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK033393|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK030479|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK014600|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK131118|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	BC003967|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene
mm9_v1_chr3_+_17954324_17954405	6.17851	GGCUCAG	BC053007|Bhlhe22|59058|basic helix-loop-helix family, member e22	NM_021560|Bhlhe22|59058|basic helix-loop-helix family, member e22	AK076228|Bhlhe22|59058|basic helix-loop-helix family, member e22
mm9_v1_chr2_-_29979973_29980080	6.13337	GGCUCAG	BC048924|Zer1|227693|zer-1 homolog (C. elegans)	NM_178694|Zer1|227693|zer-1 homolog (C. elegans)	AK087046|Zer1|227693|zer-1 homolog (C. elegans)	AK081355|Zer1|227693|zer-1 homolog (C. elegans)	AK048853|Zer1|227693|zer-1 homolog (C. elegans)	BC057021|Zer1|227693|zer-1 homolog (C. elegans)	AK155401|Zer1|227693|zer-1 homolog (C. elegans)
mm9_v1_chr5_+_53440591_53440620	6.07011	GGCUCAG	AK164786|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	NM_011402|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK004832|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK145599|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AF081499|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	BC096369|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2
mm9_v1_chr11_-_98190774_98191090	5.9799	GGCUCAG	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr11_+_68913653_68913659	5.94479	GGCUCAG	AK148202|Per1|18626|period homolog 1 (Drosophila)	AK172958|Per1|18626|period homolog 1 (Drosophila)	NM_001159367|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr2_+_70400179_70400352	5.88501	GGCUCAG	AK054554|Gad1|14415|glutamic acid decarboxylase 1	NM_008077|Gad1|14415|glutamic acid decarboxylase 1	AK148497|Gad1|14415|glutamic acid decarboxylase 1	AK160868|Gad1|14415|glutamic acid decarboxylase 1	AK136801|Gad1|14415|glutamic acid decarboxylase 1	BC027059|Gad1|14415|glutamic acid decarboxylase 1	AF326547|Gad1|14415|glutamic acid decarboxylase 1	AF326548|Gad1|14415|glutamic acid decarboxylase 1	Z49976|Gad1|14415|glutamic acid decarboxylase 1
mm9_v1_chr19_+_8815893_8816001	5.69952	GGCUCAG	NM_001167799|Stx5a|56389|syntaxin 5A	AK002722|Stx5a|56389|syntaxin 5A	BC004849|Stx5a|56389|syntaxin 5A
mm9_v1_chr2_+_150574777_150574886	5.66532	GGCUCAG	AK030789|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	NM_172117|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC038126|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC028318|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	AK156685|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6
mm9_v1_chr7_+_133415982_133416132	5.6046	GGCUCAG	BC031759|Sbk1|104175|SH3-binding kinase 1	NM_145587|Sbk1|104175|SH3-binding kinase 1
mm9_v1_chr2_+_158492854_158492905	5.58921	GGCUCAG	AK044453|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_001159662|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC054764|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC057542|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AF423761|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AK042123|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr1_+_60803231_60803317	5.48789	GGCUCAG	NM_007642|Cd28|12487|CD28 antigen	AK041322|Cd28|12487|CD28 antigen	M34563|Cd28|12487|CD28 antigen	AK088021|Cd28|12487|CD28 antigen	AK030812|Cd28|12487|CD28 antigen	BC064058|Cd28|12487|CD28 antigen
mm9_v1_chr10_+_41530379_41530379	5.39965	GGCUCAG	BC100403|Sesn1|140742|sestrin 1	NM_001162908|Sesn1|140742|sestrin 1
mm9_v1_chr16_+_11066390_11066492	5.37395	GGCUCAG	NM_009223|Snn|20621|stannin	BC006961|Snn|20621|stannin	AK149685|Snn|20621|stannin	BC063027|Snn|20621|stannin	BC017685|Snn|20621|stannin
mm9_v1_chr13_-_92901406_92901450	5.32386	GGCUCAG	NM_009027|Rasgrf2|19418|RAS protein-specific guanine nucleotide-releasing factor 2	U67326|Rasgrf2|19418|RAS protein-specific guanine nucleotide-releasing factor 2
mm9_v1_chr19_+_53217238_53217304	5.30009	GGCUCAG	NM_001164100|Add3|27360|adducin 3 (gamma)	AK144174|Add3|27360|adducin 3 (gamma)
mm9_v1_chr19_+_8816292_8816349	5.15267	GGCUCAG	AK166087|Stx5a|56389|syntaxin 5A	NM_019829|Stx5a|56389|syntaxin 5A	BC021883|Stx5a|56389|syntaxin 5A
mm9_v1_chr5_+_72594551_72594730	5.15225	GGCUCAG	AK087333|Atp10d|231287|ATPase, class V, type 10D	AJ441079|Atp10d|231287|ATPase, class V, type 10D	NM_153389|Atp10d|231287|ATPase, class V, type 10D	BC099527|Atp10d|231287|ATPase, class V, type 10D	BC141328|Atp10d|231287|ATPase, class V, type 10D
mm9_v1_chr5_+_144861227_144861325	4.97907	GGCUCAG	AK158724|Lmtk2|231876|lemur tyrosine kinase 2	NM_001081109|Lmtk2|231876|lemur tyrosine kinase 2
mm9_v1_chr11_+_115024626_115024782	4.91522	GGCUCAG	AK085210|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	AK168894|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	NM_012030|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	AK153558|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	BC085141|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	U74079|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	BC038656|Slc9a3r1|26941|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
mm9_v1_chr17_+_47874876_47874879	4.82815	GGCUCAG	AK154971|Tcfeb|21425|transcription factor EB	NM_001161723|Tcfeb|21425|transcription factor EB
mm9_v1_chr10_+_41607235_41607307	4.79488	GGCUCAG	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chr11_-_5965743_5965763	4.76803	GGCUCAG	AK046454|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	NM_001174053|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	NM_001174054|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta	NM_007595|Camk2b|12323|calcium/calmodulin-dependent protein kinase II, beta
mm9_v1_chr7_-_28231535_28231646	4.71097	GGCUCAG	AK006254|Spnb4|80297|spectrin beta 4	AB055618|Spnb4|80297|spectrin beta 4	NM_032610|Spnb4|80297|spectrin beta 4	AK147558|Spnb4|80297|spectrin beta 4
mm9_v1_chr6_+_72297294_72297363	4.68357	GGCUCAG	AK085662|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	NM_026696|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC064080|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	AK013079|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC066053|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC117811|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	BC117812|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene	AK002701|0610030E20Rik|68364|RIKEN cDNA 0610030E20 gene
mm9_v1_chr3_+_90070455_90070469	4.68178	GGCUCAG	NM_201407|Dennd4b|229541|DENN/MADD domain containing 4B	AK155638|Dennd4b|229541|DENN/MADD domain containing 4B
mm9_v1_chr8_-_63433528_63433596	4.66698	GGCUCAG	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr7_+_132746942_132746942	4.66301	GGCUCAG	AK040073|Il21r|60504|interleukin 21 receptor	NM_021887|Il21r|60504|interleukin 21 receptor
mm9_v1_chr16_+_33684551_33684609	4.6215	GGCUCAG	AK028518|Heg1|77446|HEG homolog 1 (zebrafish)	AK163128|Heg1|77446|HEG homolog 1 (zebrafish)	NM_175256|Heg1|77446|HEG homolog 1 (zebrafish)
mm9_v1_chr17_+_47922668_47922713	4.59795	GGCUCAG	AK146016|Tcfeb|21425|transcription factor EB	BC064789|Tcfeb|21425|transcription factor EB	NM_011549|Tcfeb|21425|transcription factor EB	AF079095|Tcfeb|21425|transcription factor EB
mm9_v1_chr12_-_88067400_88067409	4.57865	GGCUCAG	BC019148|Angel1|68737|angel homolog 1 (Drosophila)	AK143549|Angel1|68737|angel homolog 1 (Drosophila)	NM_144524|Angel1|68737|angel homolog 1 (Drosophila)
mm9_v1_chr19_+_45063750_45063833	4.56944	GGCUCAG	AK039355|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	BC054532|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AK173219|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	AF134918|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	NM_011976|Sema4g|26456|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm9_v1_chr3_-_115417932_115417972	4.55242	GGCUCAG	AK004591|S1pr1|13609|sphingosine-1-phosphate receptor 1	NM_007901|S1pr1|13609|sphingosine-1-phosphate receptor 1
mm9_v1_chr11_+_45869473_45869501	4.54917	GGCUCAG	NM_009616|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC093480|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr13_+_84361874_84361961	4.5354	GGCUCAG	NM_175187|Tmem161b|72745|transmembrane protein 161B	AK035319|Tmem161b|72745|transmembrane protein 161B	BC060067|Tmem161b|72745|transmembrane protein 161B	AK013305|Tmem161b|72745|transmembrane protein 161B	AK088393|Tmem161b|72745|transmembrane protein 161B	AK051974|Tmem161b|72745|transmembrane protein 161B	BC051663|Tmem161b|72745|transmembrane protein 161B
mm9_v1_chr12_+_4924157_4924219	4.51706	GGCUCAG	AK161170|Atad2b|320817|ATPase family, AAA domain containing 2B	NM_001099628|Atad2b|320817|ATPase family, AAA domain containing 2B	AK080580|Atad2b|320817|ATPase family, AAA domain containing 2B	AK085232|Atad2b|320817|ATPase family, AAA domain containing 2B
mm9_v1_chr1_+_9591347_9591354	4.48989	GGCUCAG	AK043759|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene	NM_178399|3110035E14Rik|76982|RIKEN cDNA 3110035E14 gene
mm9_v1_chr6_+_56664888_56664904	4.42773	GGCUCAG	AK147365|Avl9|78937|AVL9 homolog (S. cerevisiase)	NM_030235|Avl9|78937|AVL9 homolog (S. cerevisiase)
mm9_v1_chr18_+_39152776_39152837	4.4154	GGCUCAG	AK011368|Arhgap26|71302|Rho GTPase activating protein 26	NM_175164|Arhgap26|71302|Rho GTPase activating protein 26
mm9_v1_chr19_+_53218486_53218486	4.38095	GGCUCAG	BC037116|Add3|27360|adducin 3 (gamma)	NM_013758|Add3|27360|adducin 3 (gamma)
mm9_v1_chr4_+_11083585_11083598	4.37123	GGCUCAG	AJ131776|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AY034611|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AY034612|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	NM_021897|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AK054214|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1	AK142321|Trp53inp1|60599|transformation related protein 53 inducible nuclear protein 1
mm9_v1_chr5_-_124545776_124545806	4.34001	GGCUCAG	AK044140|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	AB093298|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	BC026455|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	AF216495|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9	NM_019875|Abcb9|56325|ATP-binding cassette, sub-family B (MDR/TAP), member 9
mm9_v1_chr17_+_50648736_50648932	4.31379	GGCUCAG	AB033615|Plcl2|224860|phospholipase C-like 2	NM_013880|Plcl2|224860|phospholipase C-like 2	AK165548|Plcl2|224860|phospholipase C-like 2	AK154288|Plcl2|224860|phospholipase C-like 2
mm9_v1_chr17_+_47873941_47874206	4.30719	GGCUCAG	NM_001161722|Tcfeb|21425|transcription factor EB	AK078755|Tcfeb|21425|transcription factor EB
mm9_v1_chr11_+_32433265_32433379	4.23541	GGCUCAG	NM_009288|Stk10|20868|serine/threonine kinase 10	D89728|Stk10|20868|serine/threonine kinase 10	BC096624|Stk10|20868|serine/threonine kinase 10	BC069840|Stk10|20868|serine/threonine kinase 10	AK148118|Stk10|20868|serine/threonine kinase 10	AK220448|Stk10|20868|serine/threonine kinase 10	BC128363|Stk10|20868|serine/threonine kinase 10
mm9_v1_chr10_-_126725826_126725958	4.17572	GGCUCAG	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr8_-_108351060_108351249	4.16602	GGCUCAG	AK173177|Ranbp10|74334|RAN binding protein 10	BC024698|Ranbp10|74334|RAN binding protein 10	AK048772|Ranbp10|74334|RAN binding protein 10	EU281316|Ranbp10|74334|RAN binding protein 10	AY337314|Ranbp10|74334|RAN binding protein 10	NM_145824|Ranbp10|74334|RAN binding protein 10
mm9_v1_chr4_+_151712739_151712761	4.13568	GGCUCAG	NM_001081376|Chd5|269610|chromodomain helicase DNA binding protein 5	NM_029216|Chd5|269610|chromodomain helicase DNA binding protein 5	AK147563|Chd5|269610|chromodomain helicase DNA binding protein 5
mm9_v1_chrX_+_7455387_7455511	4.09288	GGCUCAG	AK043570|Pim2|18715|proviral integration site 2	L41495|Pim2|18715|proviral integration site 2	NM_138606|Pim2|18715|proviral integration site 2	BC027376|Pim2|18715|proviral integration site 2
mm9_v1_chrX_-_48559008_48559019	4.08715	GGCUCAG	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chr3_-_53461276_53461276	4.04732	GGCUCAG	AB236662|Frem2|242022|Fras1 related extracellular matrix protein 2	NM_172862|Frem2|242022|Fras1 related extracellular matrix protein 2
mm9_v1_chr18_-_53904193_53904270	4.02211	GGCUCAG	AK044952|Cep120|225523|centrosomal protein 120	BC053439|Cep120|225523|centrosomal protein 120	NM_178686|Cep120|225523|centrosomal protein 120	AK089236|Cep120|225523|centrosomal protein 120	AK089242|Cep120|225523|centrosomal protein 120	AK044808|Cep120|225523|centrosomal protein 120	AK079319|Cep120|225523|centrosomal protein 120	AK047594|Cep120|225523|centrosomal protein 120	AK038916|Cep120|225523|centrosomal protein 120
mm9_v1_chr5_+_124423632_124423689	3.96038	GGCUCAG	NM_145070|Hip1r|29816|huntingtin interacting protein 1 related	BC065101|Hip1r|29816|huntingtin interacting protein 1 related	AK014542|Hip1r|29816|huntingtin interacting protein 1 related	AK129182|Hip1r|29816|huntingtin interacting protein 1 related
mm9_v1_chr7_+_4088622_4088685	3.95431	GGCUCAG	AK170629|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK034310|Leng8|232798|leukocyte receptor cluster (LRC) member 8	NM_172736|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK085304|Leng8|232798|leukocyte receptor cluster (LRC) member 8	AK158293|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC066768|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC042658|Leng8|232798|leukocyte receptor cluster (LRC) member 8	BC041775|Leng8|232798|leukocyte receptor cluster (LRC) member 8
mm9_v1_chr14_+_33669941_33669986	3.8702	GGCUCAG	AK053685|E130203B14Rik|320736|RIKEN cDNA E130203B14 gene	NM_178791|E130203B14Rik|320736|RIKEN cDNA E130203B14 gene	BC107254|E130203B14Rik|320736|RIKEN cDNA E130203B14 gene	BC153828|E130203B14Rik|320736|RIKEN cDNA E130203B14 gene	BC125012|E130203B14Rik|320736|RIKEN cDNA E130203B14 gene	AK033244|E130203B14Rik|320736|RIKEN cDNA E130203B14 gene
mm9_v1_chr11_+_116295406_116295422	3.83732	GGCUCAG	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr8_-_63462080_63462110	3.81649	GGCUCAG	AK159698|Clcn3|12725|chloride channel 3	AK036501|Clcn3|12725|chloride channel 3	NM_007711|Clcn3|12725|chloride channel 3	NM_173873|Clcn3|12725|chloride channel 3	NM_173874|Clcn3|12725|chloride channel 3
mm9_v1_chr2_+_3630729_3630774	3.80548	GGCUCAG	AK032875|Fam107b|66540|family with sequence similarity 107, member B	NM_025626|Fam107b|66540|family with sequence similarity 107, member B	AK013932|Fam107b|66540|family with sequence similarity 107, member B	AK168759|Fam107b|66540|family with sequence similarity 107, member B	BC021353|Fam107b|66540|family with sequence similarity 107, member B
mm9_v1_chr17_+_57418517_57418636	3.79118	GGCUCAG	M59833|Vav1|22324|vav 1 oncogene	AK151214|Vav1|22324|vav 1 oncogene	NM_001163815|Vav1|22324|vav 1 oncogene	NM_001163816|Vav1|22324|vav 1 oncogene	NM_011691|Vav1|22324|vav 1 oncogene	AK151183|Vav1|22324|vav 1 oncogene	AK151367|Vav1|22324|vav 1 oncogene	AK152073|Vav1|22324|vav 1 oncogene	AK152425|Vav1|22324|vav 1 oncogene	AK153265|Vav1|22324|vav 1 oncogene	AK159326|Vav1|22324|vav 1 oncogene	AK169478|Vav1|22324|vav 1 oncogene	AK171873|Vav1|22324|vav 1 oncogene	AK151373|Vav1|22324|vav 1 oncogene	AK150398|Vav1|22324|vav 1 oncogene	AK151831|Vav1|22324|vav 1 oncogene	AK088586|Vav1|22324|vav 1 oncogene	AK152555|Vav1|22324|vav 1 oncogene	AK154183|Vav1|22324|vav 1 oncogene	AK146347|Vav1|22324|vav 1 oncogene	BC020487|Vav1|22324|vav 1 oncogene	AK153052|Vav1|22324|vav 1 oncogene	X64361|Vav1|22324|vav 1 oncogene	CT010321|Vav1|22324|vav 1 oncogene
mm9_v1_chr9_-_57492978_57493044	3.79031	GGCUCAG	BC018394|Csk|12988|c-src tyrosine kinase	NM_007783|Csk|12988|c-src tyrosine kinase	AK156058|Csk|12988|c-src tyrosine kinase	AK170815|Csk|12988|c-src tyrosine kinase	BC052006|Csk|12988|c-src tyrosine kinase
mm9_v1_chr2_+_112106470_112106612	3.75941	GGCUCAG	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr2_-_5635547_5635807	3.70519	GGCUCAG	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr16_-_64786146_64786199	3.68779	GGCUCAG	BC068018|Zfp654|72020|zinc finger protein 654	NM_028059|Zfp654|72020|zinc finger protein 654	AK005508|Zfp654|72020|zinc finger protein 654
mm9_v1_chr10_-_74980017_74980125	3.67998	GGCUCAG	AK040832|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC024851|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC043463|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	NM_175133|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	AK170872|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC118613|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC119795|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	AK157404|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene
mm9_v1_chrX_+_7418894_7418995	3.65202	GGCUCAG	BC016529|Otud5|54644|OTU domain containing 5	NM_138604|Otud5|54644|OTU domain containing 5	AK155131|Otud5|54644|OTU domain containing 5
mm9_v1_chr4_-_25727109_25727390	3.65142	GGCUCAG	AK049122|Fut9|14348|fucosyltransferase 9	NM_010243|Fut9|14348|fucosyltransferase 9	AK032177|Fut9|14348|fucosyltransferase 9	AK139133|Fut9|14348|fucosyltransferase 9	AK033607|Fut9|14348|fucosyltransferase 9
mm9_v1_chr17_+_83750246_83750339	3.62334	GGCUCAG	AK144604|Eml4|78798|echinoderm microtubule associated protein like 4	NM_001114361|Eml4|78798|echinoderm microtubule associated protein like 4	NM_001114362|Eml4|78798|echinoderm microtubule associated protein like 4	NM_199466|Eml4|78798|echinoderm microtubule associated protein like 4	BC067011|Eml4|78798|echinoderm microtubule associated protein like 4	BC070427|Eml4|78798|echinoderm microtubule associated protein like 4	BC065178|Eml4|78798|echinoderm microtubule associated protein like 4	BC066099|Eml4|78798|echinoderm microtubule associated protein like 4	BC079619|Eml4|78798|echinoderm microtubule associated protein like 4
mm9_v1_chr17_+_35204268_35204334	3.59543	GGCUCAG	AK003375|Ly6g6c|68468|lymphocyte antigen 6 complex, locus G6C	NM_023463|Ly6g6c|68468|lymphocyte antigen 6 complex, locus G6C	BC116365|Ly6g6c|68468|lymphocyte antigen 6 complex, locus G6C	BC116366|Ly6g6c|68468|lymphocyte antigen 6 complex, locus G6C	AJ315546|Ly6g6c|68468|lymphocyte antigen 6 complex, locus G6C	AJ315547|Ly6g6c|68468|lymphocyte antigen 6 complex, locus G6C
mm9_v1_chr19_+_53214934_53215104	3.56492	GGCUCAG	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr3_-_81949667_81949798	3.56278	GGCUCAG	BC057327|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK031305|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK028558|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AK004815|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	AF297082|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3	NM_021896|Gucy1a3|60596|guanylate cyclase 1, soluble, alpha 3
mm9_v1_chr5_-_90312358_90312358	3.56196	GGCUCAG	AK031900|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	NM_001081401|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	NM_177872|Adamts3|330119|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
mm9_v1_chr2_+_156546694_156546736	3.5573	GGCUCAG	NM_001042488|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr11_-_106021399_106021524	3.55169	GGCUCAG	BC068130|Limd2|67803|LIM domain containing 2	AK049809|Limd2|67803|LIM domain containing 2	AK167349|Limd2|67803|LIM domain containing 2	AK169829|Limd2|67803|LIM domain containing 2	AK012581|Limd2|67803|LIM domain containing 2	AK032430|Limd2|67803|LIM domain containing 2	AK040486|Limd2|67803|LIM domain containing 2	NM_172397|Limd2|67803|LIM domain containing 2
mm9_v1_chr9_-_97933533_97933585	3.50242	GGCUCAG	AJ278069|Clstn2|64085|calsyntenin 2	BC063058|Clstn2|64085|calsyntenin 2	NM_022319|Clstn2|64085|calsyntenin 2
mm9_v1_chr18_-_77803843_77803942	3.47859	GGCUCAG	DQ465971|8030462N17Rik|212163|RIKEN cDNA 8030462N17 gene	NM_001164504|Rnf165|225743|ring finger protein 165
mm9_v1_chr11_-_78510874_78510941	3.40072	GGCUCAG	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr16_+_31422377_31422406	3.38682	GGCUCAG	BC043683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_175177|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr7_+_19946564_19946602	3.38035	GGCUCAG	AK170535|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	NM_001010836|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	AK146098|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like	AY869711|Ppp1r13l|333654|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm9_v1_chr16_-_91597886_91597995	3.34775	GGCUCAG	AK098154|Tmem50b|77975|transmembrane protein 50B	AK150773|Tmem50b|77975|transmembrane protein 50B	AK172335|Tmem50b|77975|transmembrane protein 50B	AK170684|Tmem50b|77975|transmembrane protein 50B	BC004841|Tmem50b|77975|transmembrane protein 50B	NM_030018|Tmem50b|77975|transmembrane protein 50B	AK020977|Tmem50b|77975|transmembrane protein 50B	AK152190|Tmem50b|77975|transmembrane protein 50B	AK152767|Tmem50b|77975|transmembrane protein 50B	AK133966|Tmem50b|77975|transmembrane protein 50B	AK151796|Tmem50b|77975|transmembrane protein 50B	AK155082|Tmem50b|77975|transmembrane protein 50B
mm9_v1_chr6_+_55401971_55401981	3.30879	GGCUCAG	AK083108|Adcyap1r1|11517|adenylate cyclase activating polypeptide 1 receptor 1	NM_001025372|Adcyap1r1|11517|adenylate cyclase activating polypeptide 1 receptor 1	NM_007407|Adcyap1r1|11517|adenylate cyclase activating polypeptide 1 receptor 1	AK042820|Adcyap1r1|11517|adenylate cyclase activating polypeptide 1 receptor 1
mm9_v1_chr14_+_84843366_84843370	3.2888	GGCUCAG	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr1_-_138130840_138130840	3.28476	GGCUCAG	BC052416|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	BC053100|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	NM_028872|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene
mm9_v1_chr6_-_126690651_126690691	3.2726	GGCUCAG	NM_013568|Kcna6|16494|potassium voltage-gated channel, shaker-related, subfamily, member 6
mm9_v1_chr11_+_83664370_83664376	3.26966	GGCUCAG	AK004837|Hnf1b|21410|HNF1 homeobox B	NM_009330|Hnf1b|21410|HNF1 homeobox B
mm9_v1_chr18_-_38094995_38095137	3.26413	GGCUCAG	AK140734|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK220466|Diap1|13367|diaphanous homolog 1 (Drosophila)	NM_007858|Diap1|13367|diaphanous homolog 1 (Drosophila)	U96963|Diap1|13367|diaphanous homolog 1 (Drosophila)	BC070412|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK012707|Diap1|13367|diaphanous homolog 1 (Drosophila)
mm9_v1_chr11_-_100217433_100217454	3.26396	GGCUCAG	BC053043|Hap1|15114|huntingtin-associated protein 1	NM_010404|Hap1|15114|huntingtin-associated protein 1	NM_177981|Hap1|15114|huntingtin-associated protein 1
mm9_v1_chrX_-_137135022_137135060	3.26297	GGCUCAG	AF201289|Tsc22d3|14605|TSC22 domain family, member 3	EU818782|Tsc22d3|14605|TSC22 domain family, member 3	NM_001077364|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr7_-_31230577_31230646	3.24048	GGCUCAG	BC021877|Aplp1|11803|amyloid beta (A4) precursor-like protein 1	NM_007467|Aplp1|11803|amyloid beta (A4) precursor-like protein 1
mm9_v1_chr3_+_94641479_94641499	3.20321	GGCUCAG	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr15_-_98748371_98748661	3.19965	GGCUCAG	AY052398|Lmbr1l|74775|limb region 1 like	AK003656|Lmbr1l|74775|limb region 1 like	BC023397|Lmbr1l|74775|limb region 1 like	AK170328|Lmbr1l|74775|limb region 1 like	AK143891|Lmbr1l|74775|limb region 1 like	AK030589|Lmbr1l|74775|limb region 1 like	AK049110|Lmbr1l|74775|limb region 1 like	NM_029098|Lmbr1l|74775|limb region 1 like	AK154968|Lmbr1l|74775|limb region 1 like
mm9_v1_chr1_+_132613903_132614127	3.18746	GGCUCAG	AK036938|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK036991|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	NM_178691|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	BC139034|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK044678|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	BC099948|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)	AK053730|Yod1|226418|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm9_v1_chr6_-_87761537_87761854	3.13548	GGCUCAG	AB232640|Rab43|69834|RAB43, member RAS oncogene family	AJ534465|Rab43|69834|RAB43, member RAS oncogene family	AK010874|Rab43|69834|RAB43, member RAS oncogene family	AK158283|Rab43|69834|RAB43, member RAS oncogene family	NM_001039394|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr11_+_83223573_83223573	3.12586	GGCUCAG	AK158941|Rasl10b|276952|RAS-like, family 10, member B	NM_001013386|Rasl10b|276952|RAS-like, family 10, member B
mm9_v1_chr11_+_54117299_54117368	3.1255	GGCUCAG	AY786363|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK147283|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	NM_001033598|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	BC016114|Acsl6|216739|acyl-CoA synthetase long-chain family member 6
mm9_v1_chr1_-_74590801_74590859	3.09442	GGCUCAG	BC139091|Usp37|319651|ubiquitin specific peptidase 37	AK133317|Usp37|319651|ubiquitin specific peptidase 37	AK030013|Usp37|319651|ubiquitin specific peptidase 37	NM_176972|Usp37|319651|ubiquitin specific peptidase 37
mm9_v1_chr3_+_94758936_94758955	3.08855	GGCUCAG	NM_017395|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	AB221679|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	AF209854|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC118948|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)	BC118949|Rfx5|53970|regulatory factor X, 5 (influences HLA class II expression)
mm9_v1_chr11_+_87574041_87574047	3.08445	GGCUCAG	AK043747|Bzrap1|207777|benzodiazepine receptor associated protein 1	NM_172449|Bzrap1|207777|benzodiazepine receptor associated protein 1
mm9_v1_chr15_-_101755120_101755167	3.01986	GGCUCAG	BC145839|Krt4|16682|keratin 4	BC145841|Krt4|16682|keratin 4	BC064008|Krt4|16682|keratin 4	NM_008475|Krt4|16682|keratin 4
mm9_v1_chr18_-_35900005_35900208	3.01881	GGCUCAG	DQ910493|Tmem173|72512|transmembrane protein 173	AK153868|Tmem173|72512|transmembrane protein 173	AK146284|Tmem173|72512|transmembrane protein 173	AX775911|Tmem173|72512|transmembrane protein 173	AK077788|Tmem173|72512|transmembrane protein 173	AK157370|Tmem173|72512|transmembrane protein 173	AK158458|Tmem173|72512|transmembrane protein 173	BC046640|Tmem173|72512|transmembrane protein 173	AK171612|Tmem173|72512|transmembrane protein 173	AK012006|Tmem173|72512|transmembrane protein 173	AK171065|Tmem173|72512|transmembrane protein 173	AK171203|Tmem173|72512|transmembrane protein 173	AK089405|Tmem173|72512|transmembrane protein 173	AK170724|Tmem173|72512|transmembrane protein 173	NM_028261|Tmem173|72512|transmembrane protein 173
mm9_v1_chr17_-_25974021_25974145	3.01327	GGCUCAG	BC021549|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	NM_144816|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	AK140428|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)
mm9_v1_chrX_-_137077639_137077729	2.97589	GGCUCAG	BC028813|Tsc22d3|14605|TSC22 domain family, member 3	AF201288|Tsc22d3|14605|TSC22 domain family, member 3	AF024519|Tsc22d3|14605|TSC22 domain family, member 3	AK083389|Tsc22d3|14605|TSC22 domain family, member 3	NM_010286|Tsc22d3|14605|TSC22 domain family, member 3	AK144196|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr11_+_54117703_54117765	2.95664	GGCUCAG	BC022959|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK147421|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	NM_001033597|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	NM_144823|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY167035|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786361|Acsl6|216739|acyl-CoA synthetase long-chain family member 6
mm9_v1_chr5_+_34064372_34064491	2.95374	GGCUCAG	NM_008010|Fgfr3|14184|fibroblast growth factor receptor 3	NM_001163215|Fgfr3|14184|fibroblast growth factor receptor 3	AK143592|Fgfr3|14184|fibroblast growth factor receptor 3	BC053056|Fgfr3|14184|fibroblast growth factor receptor 3	M81342|Fgfr3|14184|fibroblast growth factor receptor 3	X58255|Fgfr3|14184|fibroblast growth factor receptor 3
mm9_v1_chr16_+_31428833_31428879	2.92779	GGCUCAG	AK146321|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK145711|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_001122683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK146962|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr2_+_119625249_119625324	2.91422	GGCUCAG	BC066058|Tyro3|22174|TYRO3 protein tyrosine kinase 3	NM_019392|Tyro3|22174|TYRO3 protein tyrosine kinase 3	BC082325|Tyro3|22174|TYRO3 protein tyrosine kinase 3	X78103|Tyro3|22174|TYRO3 protein tyrosine kinase 3	U18933|Tyro3|22174|TYRO3 protein tyrosine kinase 3
mm9_v1_chr14_-_70132309_70132386	2.89663	GGCUCAG	BC024115|Chmp7|105513|CHMP family, member 7	BC033365|Chmp7|105513|CHMP family, member 7	NM_134078|Chmp7|105513|CHMP family, member 7
mm9_v1_chr8_+_74685098_74685285	2.89422	GGCUCAG	NM_023126|Rab8a|17274|RAB8A, member RAS oncogene family	AK076048|Rab8a|17274|RAB8A, member RAS oncogene family	AK147178|Rab8a|17274|RAB8A, member RAS oncogene family	AK079306|Rab8a|17274|RAB8A, member RAS oncogene family	S53270|Rab8a|17274|RAB8A, member RAS oncogene family	AK009259|Rab8a|17274|RAB8A, member RAS oncogene family	AK010862|Rab8a|17274|RAB8A, member RAS oncogene family	AK080740|Rab8a|17274|RAB8A, member RAS oncogene family	AK165690|Rab8a|17274|RAB8A, member RAS oncogene family	AB232600|Rab8a|17274|RAB8A, member RAS oncogene family	BC019990|Rab8a|17274|RAB8A, member RAS oncogene family	AY974570|Rab8a|17274|RAB8A, member RAS oncogene family
mm9_v1_chr5_+_115879617_115879707	2.89271	GGCUCAG	D49654|Msi1|17690|Musashi homolog 1(Drosophila)	NM_008629|Msi1|17690|Musashi homolog 1(Drosophila)	AK084019|Msi1|17690|Musashi homolog 1(Drosophila)
mm9_v1_chr4_-_63283448_63283462	2.88996	GGCUCAG	BC048618|1700018C11Rik|75524|RIKEN cDNA 1700018C11 gene	AK006081|1700018C11Rik|75524|RIKEN cDNA 1700018C11 gene	NM_029324|1700018C11Rik|75524|RIKEN cDNA 1700018C11 gene
mm9_v1_chr11_+_56825192_56825257	2.85	GGCUCAG	NM_001113325|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)	NM_008165|Gria1|14799|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm9_v1_chr15_-_100467247_100467344	2.84329	GGCUCAG	NM_174992|Smagp|207818|small cell adhesion glycoprotein	NM_001033872|Smagp|207818|small cell adhesion glycoprotein
mm9_v1_chrX_+_7215705_7215836	2.8321	GGCUCAG	NM_009305|Syp|20977|synaptophysin	AK034291|Syp|20977|synaptophysin	AK043756|Syp|20977|synaptophysin	AK090259|Syp|20977|synaptophysin	BC052354|Syp|20977|synaptophysin	BC014823|Syp|20977|synaptophysin	X95818|Syp|20977|synaptophysin
mm9_v1_chr11_-_102157904_102158007	2.8244	GGCUCAG	NM_001098836|Atxn7l3|217218|ataxin 7-like 3	NM_001098837|Atxn7l3|217218|ataxin 7-like 3	AK090368|Atxn7l3|217218|ataxin 7-like 3
mm9_v1_chr4_-_75779379_75779379	2.81729	GGCUCAG	AF326559|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AF326560|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_001014288|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr14_+_56179739_56179780	2.81269	GGCUCAG	NM_001199009|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK150183|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr18_-_47528483_47528523	2.79766	GGCUCAG	BC059238|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK042751|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_018744|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK082711|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm9_v1_chr15_+_96117952_96118007	2.72127	GGCUCAG	AK007269|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)	NM_175251|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr10_+_5151833_5151833	2.72062	GGCUCAG	AK041626|Syne1|64009|synaptic nuclear envelope 1	NM_001079686|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr10_+_79611013_79611064	2.7168	GGCUCAG	AK164324|Midn|59090|midnolin	AK164651|Midn|59090|midnolin	AB036882|Midn|59090|midnolin	NM_021565|Midn|59090|midnolin	BC034719|Midn|59090|midnolin
mm9_v1_chr15_+_99532698_99532771	2.70481	GGCUCAG	NM_031842|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC059921|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	M25773|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66620|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC079839|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr16_+_36071694_36071777	2.69804	GGCUCAG	AK144564|Ccdc58|381045|coiled-coil domain containing 58	NM_001159421|Ccdc58|381045|coiled-coil domain containing 58	NM_198645|Ccdc58|381045|coiled-coil domain containing 58	BC024862|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr1_-_136131981_136132033	2.66546	GGCUCAG	NM_001008533|Adora1|11539|adenosine A1 receptor	AK038774|Adora1|11539|adenosine A1 receptor	NM_001039510|Adora1|11539|adenosine A1 receptor	AK134532|Adora1|11539|adenosine A1 receptor
mm9_v1_chr7_+_108599740_108599766	2.64522	GGCUCAG	NM_001143849|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr2_+_112124767_112124844	2.64201	GGCUCAG	AF211855|Slc12a6|107723|solute carrier family 12, member 6	NM_133648|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr11_-_69419419_69419489	2.63749	GGCUCAG	BC058763|Atp1b2|11932|ATPase, Na+/K+ transporting, beta 2 polypeptide	BC034586|Atp1b2|11932|ATPase, Na+/K+ transporting, beta 2 polypeptide	AK158321|Atp1b2|11932|ATPase, Na+/K+ transporting, beta 2 polypeptide	AK141786|Atp1b2|11932|ATPase, Na+/K+ transporting, beta 2 polypeptide	NM_013415|Atp1b2|11932|ATPase, Na+/K+ transporting, beta 2 polypeptide
mm9_v1_chr14_+_56178853_56178921	2.62189	GGCUCAG	NM_133734|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK033540|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK170657|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK158784|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr18_+_42435006_42435038	2.60622	GGCUCAG	NM_172626|Rbm27|225432|RNA binding motif protein 27	AY461716|Rbm27|225432|RNA binding motif protein 27
mm9_v1_chr11_+_106650565_106650638	2.60576	GGCUCAG	NM_001166685|Ccdc45|320162|coiled-coil domain containing 45	NM_177088|Ccdc45|320162|coiled-coil domain containing 45	AK076400|Ccdc45|320162|coiled-coil domain containing 45	AK165351|Ccdc45|320162|coiled-coil domain containing 45	BC116308|Ccdc45|320162|coiled-coil domain containing 45	BC116309|Ccdc45|320162|coiled-coil domain containing 45	BC090675|Ccdc45|320162|coiled-coil domain containing 45	AK052705|Ccdc45|320162|coiled-coil domain containing 45
mm9_v1_chr12_-_88729144_88729282	2.6056	GGCUCAG	U27455|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	X95642|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK089019|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK008871|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK044917|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK159346|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	NM_011479|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	BC003227|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK057644|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2
mm9_v1_chr7_+_104480819_104480860	2.60179	GGCUCAG	NM_001039039|Kctd21|622320|potassium channel tetramerisation domain containing 21	AK141547|Kctd21|622320|potassium channel tetramerisation domain containing 21
mm9_v1_chr7_+_108570211_108570212	2.59221	GGCUCAG	NM_001008548|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	NM_001143848|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr3_-_105604199_105604320	2.57984	GGCUCAG	AK152504|Rap1a|109905|RAS-related protein-1a	AK030897|Rap1a|109905|RAS-related protein-1a	BC051419|Rap1a|109905|RAS-related protein-1a	NM_145541|Rap1a|109905|RAS-related protein-1a
mm9_v1_chr1_+_163072784_163072870	2.56373	GGCUCAG	AK016757|Ankrd45|73844|ankyrin repeat domain 45	NM_028664|Ankrd45|73844|ankyrin repeat domain 45	BC049713|Ankrd45|73844|ankyrin repeat domain 45
mm9_v1_chr6_+_113342490_113342490	2.54902	GGCUCAG	AM690746|Ttll3|101100|tubulin tyrosine ligase-like family, member 3	NM_133923|Ttll3|101100|tubulin tyrosine ligase-like family, member 3
mm9_v1_chr1_+_168184269_168184413	2.5463	GGCUCAG	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr4_-_132895228_132895231	2.5452	GGCUCAG	AK172431|Wdtc1|230796|WD and tetratricopeptide repeats 1	NM_199306|Wdtc1|230796|WD and tetratricopeptide repeats 1
mm9_v1_chr3_-_100293092_100293154	2.52251	GGCUCAG	BC037072|Fam46c|74645|family with sequence similarity 46, member C	BC120717|Fam46c|74645|family with sequence similarity 46, member C	BC120719|Fam46c|74645|family with sequence similarity 46, member C	BC046309|Fam46c|74645|family with sequence similarity 46, member C	NM_001142952|Fam46c|74645|family with sequence similarity 46, member C
mm9_v1_chr2_+_156547014_156547227	2.51546	GGCUCAG	NM_001042487|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)	BC085475|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr17_+_49071906_49072030	2.50824	GGCUCAG	BC139418|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	NM_027452|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK122476|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK044375|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2
mm9_v1_chr2_-_7317824_7317824	2.48956	GGCUCAG	AK160861|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110231|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr14_-_61656804_61656823	2.46881	GGCUCAG	NM_001164155|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chrX_+_38754480_38754557	2.46437	GGCUCAG	NM_016886|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)	BC086678|Gria3|53623|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm9_v1_chr7_-_106387077_106387128	2.46417	GGCUCAG	AY157609|Mogat2|233549|monoacylglycerol O-acyltransferase 2	AK049560|Mogat2|233549|monoacylglycerol O-acyltransferase 2	BC052831|Mogat2|233549|monoacylglycerol O-acyltransferase 2	NM_177448|Mogat2|233549|monoacylglycerol O-acyltransferase 2	AK133854|Mogat2|233549|monoacylglycerol O-acyltransferase 2
mm9_v1_chr18_+_35000283_35000409	2.46345	GGCUCAG	BC020184|Reep2|225362|receptor accessory protein 2	NM_144865|Reep2|225362|receptor accessory protein 2	AK147333|Reep2|225362|receptor accessory protein 2	AY562230|Reep2|225362|receptor accessory protein 2	EU555417|Reep2|225362|receptor accessory protein 2
mm9_v1_chr7_-_59261060_59261387	2.44334	GGCUCAG	AK005663|Svip|75744|small VCP/p97-interacting protein	AK029831|Svip|75744|small VCP/p97-interacting protein	BC100498|Svip|75744|small VCP/p97-interacting protein	BC049720|Svip|75744|small VCP/p97-interacting protein	AK133737|Svip|75744|small VCP/p97-interacting protein	AK018351|Svip|75744|small VCP/p97-interacting protein	AK158571|Svip|75744|small VCP/p97-interacting protein	NM_001160345|Svip|75744|small VCP/p97-interacting protein
mm9_v1_chr2_-_65405546_65405588	2.42778	GGCUCAG	AK148881|Scn3a|20269|sodium channel, voltage-gated, type III, alpha	NM_018732|Scn3a|20269|sodium channel, voltage-gated, type III, alpha
mm9_v1_chr19_+_18824472_18824480	2.38638	GGCUCAG	AY135644|Trpm6|225997|transient receptor potential cation channel, subfamily M, member 6	NM_153417|Trpm6|225997|transient receptor potential cation channel, subfamily M, member 6	BC145223|Trpm6|225997|transient receptor potential cation channel, subfamily M, member 6
mm9_v1_chr17_-_24346280_24346475	2.35904	GGCUCAG	BC094362|Ntn3|18209|netrin 3	NM_010947|Ntn3|18209|netrin 3	AK083904|Ntn3|18209|netrin 3	BC053038|Ntn3|18209|netrin 3	AK031199|Ntn3|18209|netrin 3
mm9_v1_chr15_-_88979923_88980035	2.34651	GGCUCAG	AK161190|Mapk11|19094|mitogen-activated protein kinase 11	BC057211|Mapk11|19094|mitogen-activated protein kinase 11	AK161562|Mapk11|19094|mitogen-activated protein kinase 11	BC064737|Mapk11|19094|mitogen-activated protein kinase 11	AK144846|Mapk11|19094|mitogen-activated protein kinase 11	AF135185|Mapk11|19094|mitogen-activated protein kinase 11	BC092526|Mapk11|19094|mitogen-activated protein kinase 11	NM_011161|Mapk11|19094|mitogen-activated protein kinase 11
mm9_v1_chr9_-_121614076_121614146	2.33985	GGCUCAG	AK029985|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	BC046289|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK031125|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	AK044249|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_001164562|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)	NM_178677|Sec22c|215474|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
mm9_v1_chr2_-_155518064_155518121	2.32089	GGCUCAG	AK154263|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	AK156047|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	AF130458|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	AK165259|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	AK171404|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	BC057330|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	AK220239|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	AK076496|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	NM_001163452|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein	NM_019828|Trpc4ap|56407|transient receptor potential cation channel, subfamily C, member 4 associated protein
mm9_v1_chr3_-_141645214_141645214	2.29999	GGCUCAG	BC065143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	NM_007560|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr11_-_86171026_86171057	2.28256	GGCUCAG	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr16_-_37539763_37539874	2.28063	GGCUCAG	AK080478|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK154283|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK031528|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK011543|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	NM_028812|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK084978|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	BC056966|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)
mm9_v1_chr7_+_106683983_106683997	2.27905	GGCUCAG	AK147508|Arrb1|109689|arrestin, beta 1	NM_177231|Arrb1|109689|arrestin, beta 1	NM_178220|Arrb1|109689|arrestin, beta 1
mm9_v1_chr18_+_21159829_21159841	2.25546	GGCUCAG	AB025010|Rnf138|56515|ring finger protein 138	AB025011|Rnf138|56515|ring finger protein 138	NM_019706|Rnf138|56515|ring finger protein 138	NM_207623|Rnf138|56515|ring finger protein 138
mm9_v1_chr14_-_61665691_61665691	2.23442	GGCUCAG	NM_013869|Tnfrsf19|29820|tumor necrosis factor receptor superfamily, member 19
mm9_v1_chr12_-_102146390_102146407	2.23008	GGCUCAG	AK087410|Gpr68|238377|G protein-coupled receptor 68	NM_001177673|Gpr68|238377|G protein-coupled receptor 68	NM_175493|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr9_+_30838224_30838249	2.22762	GGCUCAG	AK036895|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_001115130|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_172765|Zbtb44|235132|zinc finger and BTB domain containing 44
mm9_v1_chr2_+_160471623_160471632	2.22402	GGCUCAG	AK145538|Top1|21969|topoisomerase (DNA) I	NM_009408|Top1|21969|topoisomerase (DNA) I
mm9_v1_chr7_+_56214442_56214485	2.21254	GGCUCAG	AK019901|Nav2|78286|neuron navigator 2	NM_001111016|Nav2|78286|neuron navigator 2	AK084063|Nav2|78286|neuron navigator 2	AK162444|Nav2|78286|neuron navigator 2
mm9_v1_chr18_-_32109233_32109289	2.20577	GGCUCAG	BC070439|Gpr17|574402|G protein-coupled receptor 17	NM_001025381|Gpr17|574402|G protein-coupled receptor 17
mm9_v1_chr11_-_94622495_94622495	2.1974	GGCUCAG	AK139527|Gm11545|217122|predicted gene 11545	NM_001105561|Gm11545|217122|predicted gene 11545
mm9_v1_chr9_-_21116749_21116776	2.1904	GGCUCAG	AF067146|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK010478|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK082674|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_001110300|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_009678|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chr11_+_54128404_54128494	2.18297	GGCUCAG	NM_001033599|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786360|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AY786362|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK032479|Acsl6|216739|acyl-CoA synthetase long-chain family member 6	AK039380|Acsl6|216739|acyl-CoA synthetase long-chain family member 6
mm9_v1_chr3_-_108003697_108003757	2.17077	GGCUCAG	AK087683|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC060107|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC137590|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_001081320|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_028061|Cyb561d1|72023|cytochrome b-561 domain containing 1	AK164441|Cyb561d1|72023|cytochrome b-561 domain containing 1
mm9_v1_chr5_+_137960107_137960139	2.13635	GGCUCAG	AY176042|Gigyf1|57330|GRB10 interacting GYF protein 1	NM_031408|Gigyf1|57330|GRB10 interacting GYF protein 1	BC052875|Gigyf1|57330|GRB10 interacting GYF protein 1
mm9_v1_chr7_-_29221173_29221209	2.10966	GGCUCAG	NM_175021|Samd4b|233033|sterile alpha motif domain containing 4B
mm9_v1_chr7_-_106859849_106859849	2.10955	GGCUCAG	AK048120|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1	NM_175316|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1
mm9_v1_chr14_+_64055230_64055357	2.10457	GGCUCAG	NM_177628|Fam167a|219148|family with sequence similarity 167, member A	BC065085|Fam167a|219148|family with sequence similarity 167, member A	BC094561|Fam167a|219148|family with sequence similarity 167, member A
mm9_v1_chr4_+_124419115_124419126	2.10277	GGCUCAG	AY007563|Inpp5b|16330|inositol polyphosphate-5-phosphatase B	BC028864|Inpp5b|16330|inositol polyphosphate-5-phosphatase B	NM_008385|Inpp5b|16330|inositol polyphosphate-5-phosphatase B
mm9_v1_chr5_-_148118681_148118824	2.10187	GGCUCAG	AK049574|Cdx2|12591|caudal type homeobox 2	BC103516|Cdx2|12591|caudal type homeobox 2	BC103517|Cdx2|12591|caudal type homeobox 2	BC103519|Cdx2|12591|caudal type homeobox 2	BC103520|Cdx2|12591|caudal type homeobox 2	AK049566|Cdx2|12591|caudal type homeobox 2	NM_007673|Cdx2|12591|caudal type homeobox 2
mm9_v1_chr4_+_59202363_59202463	2.08122	GGCUCAG	AK138848|Ugcg|22234|UDP-glucose ceramide glucosyltransferase	BC050828|Ugcg|22234|UDP-glucose ceramide glucosyltransferase	NM_011673|Ugcg|22234|UDP-glucose ceramide glucosyltransferase
mm9_v1_chr6_+_71657791_71657963	2.07128	GGCUCAG	AK035238|Reep1|52250|receptor accessory protein 1	AK045056|Reep1|52250|receptor accessory protein 1	NM_178608|Reep1|52250|receptor accessory protein 1	AK053158|Reep1|52250|receptor accessory protein 1	AK136916|Reep1|52250|receptor accessory protein 1	BC046826|Reep1|52250|receptor accessory protein 1	AY562229|Reep1|52250|receptor accessory protein 1
mm9_v1_chr1_-_64784316_64784324	2.06334	GGCUCAG	AK039402|Fzd5|14367|frizzled homolog 5 (Drosophila)	NM_001042659|Fzd5|14367|frizzled homolog 5 (Drosophila)	NM_022721|Fzd5|14367|frizzled homolog 5 (Drosophila)	AK030111|Fzd5|14367|frizzled homolog 5 (Drosophila)
mm9_v1_chr9_+_32031833_32031859	2.06237	GGCUCAG	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr6_-_120443824_120443824	2.0306	GGCUCAG	AF277399|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)	BC137862|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)	NM_033567|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)
mm9_v1_chr4_+_120339167_120339220	2.02019	GGCUCAG	NM_019563|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK012136|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK154030|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC025116|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC080723|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AF143369|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132360|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132362|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4
mm9_v1_chr6_-_85283412_85283433	2.01059	GGCUCAG	AK036285|Sfxn5|94282|sideroflexin 5	AK043706|Sfxn5|94282|sideroflexin 5	AK082073|Sfxn5|94282|sideroflexin 5	AK038793|Sfxn5|94282|sideroflexin 5	NM_178639|Sfxn5|94282|sideroflexin 5
mm9_v1_chrX_+_91969907_91969907	2.00634	GGCUCAG	NM_001081473|Zxdb|668166|zinc finger, X-linked, duplicated B
mm9_v1_chr9_+_44142772_44142803	1.98488	GGCUCAG	AK088040|H2afx|15270|H2A histone family, member X	AK008124|H2afx|15270|H2A histone family, member X	X58069|H2afx|15270|H2A histone family, member X	BC010336|H2afx|15270|H2A histone family, member X	NM_010436|H2afx|15270|H2A histone family, member X	BC005468|H2afx|15270|H2A histone family, member X
mm9_v1_chr1_+_136078939_136079071	1.97272	GGCUCAG	NM_007695|Chi3l1|12654|chitinase 3-like 1	AK051475|Chi3l1|12654|chitinase 3-like 1	AK155412|Chi3l1|12654|chitinase 3-like 1	BC003780|Chi3l1|12654|chitinase 3-like 1	BC004734|Chi3l1|12654|chitinase 3-like 1	BC005611|Chi3l1|12654|chitinase 3-like 1
mm9_v1_chr11_-_101949793_101949840	1.96555	GGCUCAG	AK172253|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	AF162685|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	AK161577|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	BC053026|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	NM_016695|Mpp2|50997|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm9_v1_chr8_+_23970006_23970020	1.93306	GGCUCAG	AK028058|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK082463|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001081149|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK039615|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK036885|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK054322|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK132474|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK143408|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3
mm9_v1_chr11_-_3271367_3271408	1.92925	GGCUCAG	AB005132|Limk2|16886|LIM motif-containing protein kinase 2	NM_173053|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr2_+_156439426_156439464	1.92233	GGCUCAG	NM_146128|Dlgap4|228836|discs, large homolog-associated protein 4 (Drosophila)
mm9_v1_chr4_+_57580989_57581153	1.91387	GGCUCAG	AK045344|Palm2|242481|paralemmin 2	NM_172868|Palm2|242481|paralemmin 2	BC113156|Palm2|242481|paralemmin 2
mm9_v1_chr12_-_102137614_102137733	1.9128	GGCUCAG	AK154292|Gm10431|100038679|predicted gene 10431	NM_001177674|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr11_-_3256143_3256143	1.90186	GGCUCAG	AB012092|Limk2|16886|LIM motif-containing protein kinase 2	AB012291|Limk2|16886|LIM motif-containing protein kinase 2	NM_001034030|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr5_+_34064954_34065046	1.89184	GGCUCAG	NM_001163216|Fgfr3|14184|fibroblast growth factor receptor 3	NM_001163217|Fgfr3|14184|fibroblast growth factor receptor 3	S56291|Fgfr3|14184|fibroblast growth factor receptor 3	AF024638|Fgfr3|14184|fibroblast growth factor receptor 3
mm9_v1_chr12_-_4484059_4484074	1.8866	GGCUCAG	NM_010881|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr11_-_29925939_29926032	1.88049	GGCUCAG	AK049034|Eml6|237711|echinoderm microtubule associated protein like 6	NM_146016|Eml6|237711|echinoderm microtubule associated protein like 6
mm9_v1_chr15_-_84277488_84277526	1.87049	GGCUCAG	BC119234|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	BC120551|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	BC062953|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene	NM_001163145|1810041L15Rik|72301|RIKEN cDNA 1810041L15 gene
mm9_v1_chr14_+_22319075_22319102	1.86863	GGCUCAG	AK052307|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	NM_017479|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	AF222800|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4
mm9_v1_chr2_-_79969095_79969127	1.86536	GGCUCAG	BC090628|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK043647|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_016744|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chrX_+_148667763_148667814	1.85329	GGCUCAG	AK150152|Kdm5c|20591|lysine (K)-specific demethylase 5C	AK155651|Kdm5c|20591|lysine (K)-specific demethylase 5C	NM_013668|Kdm5c|20591|lysine (K)-specific demethylase 5C	AK011577|Kdm5c|20591|lysine (K)-specific demethylase 5C	AK155279|Kdm5c|20591|lysine (K)-specific demethylase 5C	AK155427|Kdm5c|20591|lysine (K)-specific demethylase 5C	AK158340|Kdm5c|20591|lysine (K)-specific demethylase 5C	AK008105|Kdm5c|20591|lysine (K)-specific demethylase 5C	BC038940|Kdm5c|20591|lysine (K)-specific demethylase 5C	AK081369|Kdm5c|20591|lysine (K)-specific demethylase 5C	BC026777|Kdm5c|20591|lysine (K)-specific demethylase 5C	AF127245|Kdm5c|20591|lysine (K)-specific demethylase 5C	BC043096|Kdm5c|20591|lysine (K)-specific demethylase 5C	BC054550|Kdm5c|20591|lysine (K)-specific demethylase 5C
mm9_v1_chr6_-_115709004_115709016	1.8499	GGCUCAG	NM_144805|Tmem40|94346|transmembrane protein 40
mm9_v1_chr6_+_134870418_134870458	1.79854	GGCUCAG	AK047669|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	NM_009875|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK050240|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK158411|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	BC014296|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr9_-_108092712_108092716	1.7905	GGCUCAG	NM_007567|Bsn|12217|bassoon
mm9_v1_chr11_-_3309227_3309253	1.78524	GGCUCAG	NM_010718|Limk2|16886|LIM motif-containing protein kinase 2
mm9_v1_chr10_+_5277477_5277627	1.77998	GGCUCAG	BC054456|Syne1|64009|synaptic nuclear envelope 1	NM_022027|Syne1|64009|synaptic nuclear envelope 1	AK036828|Syne1|64009|synaptic nuclear envelope 1	BC110428|Syne1|64009|synaptic nuclear envelope 1	AF281869|Syne1|64009|synaptic nuclear envelope 1	AK164813|Syne1|64009|synaptic nuclear envelope 1
mm9_v1_chr11_+_96874882_96874882	1.7778	GGCUCAG	AY338955|Sp6|83395|trans-acting transcription factor 6	NM_031183|Sp6|83395|trans-acting transcription factor 6
mm9_v1_chr8_-_38001686_38001686	1.77415	GGCUCAG	HM008381|Dlc1|50768|deleted in liver cancer 1	NM_001194940|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr2_-_130468507_130468540	1.7715	GGCUCAG	AK161711|Prosapip1|241638|ProSAPiP1 protein	AK148251|Prosapip1|241638|ProSAPiP1 protein	NM_197945|Prosapip1|241638|ProSAPiP1 protein
mm9_v1_chr7_+_139802303_139802366	1.76691	GGCUCAG	NM_029609|Lhpp|76429|phospholysine phosphohistidine inorganic pyrophosphate phosphatase	AK009207|Lhpp|76429|phospholysine phosphohistidine inorganic pyrophosphate phosphatase	BC065789|Lhpp|76429|phospholysine phosphohistidine inorganic pyrophosphate phosphatase
mm9_v1_chr5_-_115223373_115223529	1.76347	GGCUCAG	AF148693|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK005365|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK017943|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC043062|Git2|26431|G protein-coupled receptor kinase-interactor 2	BC056993|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077360|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_019834|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK220323|Git2|26431|G protein-coupled receptor kinase-interactor 2	NM_001077359|Git2|26431|G protein-coupled receptor kinase-interactor 2	AK148029|Git2|26431|G protein-coupled receptor kinase-interactor 2
mm9_v1_chr15_+_101004502_101004580	1.76331	GGCUCAG	BC145775|Acvr1b|11479|activin A receptor, type 1B	BC145777|Acvr1b|11479|activin A receptor, type 1B	AK154578|Acvr1b|11479|activin A receptor, type 1B	AK157910|Acvr1b|11479|activin A receptor, type 1B	NM_007395|Acvr1b|11479|activin A receptor, type 1B	BC059832|Acvr1b|11479|activin A receptor, type 1B	Z31663|Acvr1b|11479|activin A receptor, type 1B
mm9_v1_chr9_+_57787915_57787952	1.73956	GGCUCAG	AK156123|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	BC057875|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	NM_011352|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AF030699|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AB017532|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	AF176670|Sema7a|20361|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm9_v1_chr17_-_15512773_15512786	1.72987	GGCUCAG	NM_007865|Dll1|13388|delta-like 1 (Drosophila)
mm9_v1_chr16_+_13358513_13358556	1.71958	GGCUCAG	NM_153588|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr8_-_37676995_37677010	1.68418	GGCUCAG	AK162413|Dlc1|50768|deleted in liver cancer 1	NM_015802|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr2_+_180234680_180234753	1.67447	GGCUCAG	AB017027|Ntsr1|18216|neurotensin receptor 1	NM_018766|Ntsr1|18216|neurotensin receptor 1	BC087730|Ntsr1|18216|neurotensin receptor 1
mm9_v1_chr1_+_195128163_195128239	1.67335	GGCUCAG	NM_008484|Lamb3|16780|laminin, beta 3	U43298|Lamb3|16780|laminin, beta 3
mm9_v1_chr4_-_76240202_76240202	1.67302	GGCUCAG	BC086654|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_011211|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr1_+_59969845_59969868	1.66262	GGCUCAG	AK154812|Fam117b|72750|family with sequence similarity 117, member B	NM_001037725|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chr5_-_72049479_72049546	1.66057	GGCUCAG	AK141571|Gabra4|14397|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4	AK159299|Gabra4|14397|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4	AK013727|Gabra4|14397|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4	NM_010251|Gabra4|14397|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4
mm9_v1_chr2_-_153051118_153051176	1.64735	GGCUCAG	BC058340|Tspyl3|241732|TSPY-like 3	AK148882|Tspyl3|241732|TSPY-like 3	AK167722|Tspyl3|241732|TSPY-like 3	AK134522|Tspyl3|241732|TSPY-like 3	NM_198617|Tspyl3|241732|TSPY-like 3
mm9_v1_chr9_+_31923720_31923720	1.64155	GGCUCAG	NM_001195632|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr2_-_7317513_7317626	1.63299	GGCUCAG	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr1_-_93355893_93355916	1.62791	GGCUCAG	AK159847|Per2|18627|period homolog 2 (Drosophila)	AK165556|Per2|18627|period homolog 2 (Drosophila)	NM_011066|Per2|18627|period homolog 2 (Drosophila)
mm9_v1_chr9_+_119354040_119354104	1.61729	GGCUCAG	NM_001172136|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	NM_172456|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK148426|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK028887|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK051300|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK162566|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK163555|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC119024|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC144729|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	AK034654|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC094589|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC052171|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC059920|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like	BC064730|Exog|208194|endo/exonuclease (5'-3'), endonuclease G-like
mm9_v1_chr6_+_114347929_114347929	1.61696	GGCUCAG	AK046607|Hrh1|15465|histamine receptor H1	NM_008285|Hrh1|15465|histamine receptor H1
mm9_v1_chr7_-_118125571_118125608	1.60988	GGCUCAG	AK020536|Mrvi1|17540|MRV integration site 1	AK157169|Mrvi1|17540|MRV integration site 1	NM_194464|Mrvi1|17540|MRV integration site 1
mm9_v1_chr13_-_41454358_41454379	1.60939	GGCUCAG	AK054179|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK033729|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_017464|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr9_+_53345151_53345154	1.58922	GGCUCAG	AK080294|Npat|244879|nuclear protein in the AT region	NM_001081152|Npat|244879|nuclear protein in the AT region
mm9_v1_chr6_+_86028044_86028077	1.58724	GGCUCAG	AK156954|Add2|11519|adducin 2 (beta)	AK028425|Add2|11519|adducin 2 (beta)	AK014496|Add2|11519|adducin 2 (beta)	NM_013458|Add2|11519|adducin 2 (beta)
mm9_v1_chr7_+_146132386_146132432	1.58654	GGCUCAG	AK018189|Jakmip3|74004|janus kinase and microtubule interacting protein 3	AK220482|Jakmip3|74004|janus kinase and microtubule interacting protein 3	NM_028708|Jakmip3|74004|janus kinase and microtubule interacting protein 3
mm9_v1_chr2_+_34729897_34729955	1.58638	GGCUCAG	AK033810|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	AK085616|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	NM_030021|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr6_-_122232849_122232899	1.57239	GGCUCAG	BC101953|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	BC103546|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	BC103547|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	BC103548|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	AF097357|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	NM_016970|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1	AJ010751|Klrg1|50928|killer cell lectin-like receptor subfamily G, member 1
mm9_v1_chr7_+_136400544_136400607	1.56161	GGCUCAG	AK081292|Ppapdc1a|381925|phosphatidic acid phosphatase type 2 domain containing 1A	BC120497|Ppapdc1a|381925|phosphatidic acid phosphatase type 2 domain containing 1A	BC144735|Ppapdc1a|381925|phosphatidic acid phosphatase type 2 domain containing 1A	NM_001080963|Ppapdc1a|381925|phosphatidic acid phosphatase type 2 domain containing 1A
mm9_v1_chr4_+_125168074_125168079	1.55741	GGCUCAG	NM_001081097|Grik3|14807|glutamate receptor, ionotropic, kainate 3	BC118004|Grik3|14807|glutamate receptor, ionotropic, kainate 3
mm9_v1_chr10_-_44178474_44178587	1.55137	GGCUCAG	AK133503|Prdm1|12142|PR domain containing 1, with ZNF domain	BC129801|Prdm1|12142|PR domain containing 1, with ZNF domain	NM_007548|Prdm1|12142|PR domain containing 1, with ZNF domain	U08185|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr11_-_108205199_108205207	1.54727	GGCUCAG	AK147084|Prkca|18750|protein kinase C, alpha	NM_011101|Prkca|18750|protein kinase C, alpha
mm9_v1_chr18_+_31793991_31794055	1.5461	GGCUCAG	BC066030|Sap130|269003|Sin3A associated protein	AK034401|Sap130|269003|Sin3A associated protein	AK053675|Sap130|269003|Sin3A associated protein	AK084078|Sap130|269003|Sin3A associated protein	NM_172965|Sap130|269003|Sin3A associated protein
mm9_v1_chr7_-_118089700_118089700	1.53163	GGCUCAG	NM_010826|Mrvi1|17540|MRV integration site 1	U63408|Mrvi1|17540|MRV integration site 1
mm9_v1_chr5_+_101275148_101275382	1.5202	GGCUCAG	AK030171|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_172715|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	AK160261|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	BC096769|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9	AK138410|Agpat9|231510|1-acylglycerol-3-phosphate O-acyltransferase 9
mm9_v1_chr2_-_79296732_79296799	1.51087	GGCUCAG	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr9_-_20935610_20935730	1.50968	GGCUCAG	AK134154|Tyk2|54721|tyrosine kinase 2	AK155923|Tyk2|54721|tyrosine kinase 2	AK171609|Tyk2|54721|tyrosine kinase 2	AF173032|Tyk2|54721|tyrosine kinase 2	AK170107|Tyk2|54721|tyrosine kinase 2	AK170940|Tyk2|54721|tyrosine kinase 2	AK154438|Tyk2|54721|tyrosine kinase 2	AK159303|Tyk2|54721|tyrosine kinase 2	AK165483|Tyk2|54721|tyrosine kinase 2	AK167726|Tyk2|54721|tyrosine kinase 2	NM_018793|Tyk2|54721|tyrosine kinase 2
mm9_v1_chr2_-_32306938_32306989	1.50814	GGCUCAG	BC037109|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK132204|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK082756|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK049392|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_001164357|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_146118|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr9_-_45763300_45763376	1.49787	GGCUCAG	AK081177|Sidt2|214597|SID1 transmembrane family, member 2	BC023957|Sidt2|214597|SID1 transmembrane family, member 2	NM_172257|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr7_-_135073617_135073632	1.49696	GGCUCAG	AF378085|Prss8|76560|protease, serine, 8 (prostasin)	AY335911|Prss8|76560|protease, serine, 8 (prostasin)	NM_133351|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr7_+_28856254_28856254	1.46736	GGCUCAG	AK077773|Fcgbp|215384|Fc fragment of IgG binding protein	NM_001122603|Fcgbp|215384|Fc fragment of IgG binding protein
mm9_v1_chr9_+_43892984_43893007	1.45479	GGCUCAG	NM_198091|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chrX_+_6356431_6356431	1.44052	GGCUCAG	BC075627|Dgkk|331374|diacylglycerol kinase kappa	NM_177914|Dgkk|331374|diacylglycerol kinase kappa
mm9_v1_chr2_-_179838878_179839091	1.42617	GGCUCAG	BC132201|Hrh3|99296|histamine receptor H3	BC145125|Hrh3|99296|histamine receptor H3	AY044153|Hrh3|99296|histamine receptor H3	NM_133849|Hrh3|99296|histamine receptor H3	AY142145|Hrh3|99296|histamine receptor H3
mm9_v1_chrX_-_136533089_136533133	1.40055	GGCUCAG	BC037024|Rbm41|237073|RNA binding motif protein 41	AK077972|Rbm41|237073|RNA binding motif protein 41	NM_001172147|Rbm41|237073|RNA binding motif protein 41	NM_001172148|Rbm41|237073|RNA binding motif protein 41	NM_153586|Rbm41|237073|RNA binding motif protein 41
mm9_v1_chr19_+_53384990_53385011	1.3875	GGCUCAG	NM_001008542|Mxi1|17859|Max interacting protein 1	AK154538|Mxi1|17859|Max interacting protein 1	BC064453|Mxi1|17859|Max interacting protein 1
mm9_v1_chr16_+_96457407_96457407	1.38701	GGCUCAG	BC047347|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	BC051669|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	NM_001122993|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm9_v1_chr17_-_46817800_46817900	1.3854	GGCUCAG	BC018154|Klhdc3|71765|kelch domain containing 3	AK004964|Klhdc3|71765|kelch domain containing 3	AK141673|Klhdc3|71765|kelch domain containing 3	NM_001163729|Klhdc3|71765|kelch domain containing 3	NM_027910|Klhdc3|71765|kelch domain containing 3
mm9_v1_chr2_-_38781939_38781980	1.37445	GGCUCAG	U14666|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_010264|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	U09563|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr5_+_121098830_121098830	1.36865	GGCUCAG	BC005418|Rasal1|19415|RAS protein activator like 1 (GAP1 like)	NM_013832|Rasal1|19415|RAS protein activator like 1 (GAP1 like)
mm9_v1_chr6_+_120314116_120314182	1.35476	GGCUCAG	AK041568|Kdm5a|214899|lysine (K)-specific demethylase 5A	NM_145997|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK166055|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK159079|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK144877|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK139619|Kdm5a|214899|lysine (K)-specific demethylase 5A	AK046187|Kdm5a|214899|lysine (K)-specific demethylase 5A	BC011506|Kdm5a|214899|lysine (K)-specific demethylase 5A
mm9_v1_chr19_+_44567961_44568029	1.35376	GGCUCAG	AK050992|Wnt8b|22423|wingless related MMTV integration site 8b	NM_011720|Wnt8b|22423|wingless related MMTV integration site 8b	AF130349|Wnt8b|22423|wingless related MMTV integration site 8b	BC119544|Wnt8b|22423|wingless related MMTV integration site 8b
mm9_v1_chr2_+_119798434_119798434	1.35103	GGCUCAG	BC070449|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1	NM_011941|Mapkbp1|26390|mitogen-activated protein kinase binding protein 1
mm9_v1_chr16_+_29209780_29209780	1.34233	GGCUCAG	AK039471|Hrasls|27281|HRAS-like suppressor	NM_013751|Hrasls|27281|HRAS-like suppressor
mm9_v1_chr13_-_51889012_51889103	1.33499	GGCUCAG	BC049780|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	NM_013660|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	AK132688|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
mm9_v1_chr7_+_129210684_129210770	1.3326	GGCUCAG	AK077395|Ubfd1|28018|ubiquitin family domain containing 1	NM_138589|Ubfd1|28018|ubiquitin family domain containing 1	BC011313|Ubfd1|28018|ubiquitin family domain containing 1	AK033428|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr2_+_164286416_164286607	1.33096	GGCUCAG	AK007882|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_025575|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK139605|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK011753|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK003071|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK013220|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032073|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK009684|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075770|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005510|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK148305|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005249|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr2_-_38640034_38640034	1.32867	GGCUCAG	NM_001159548|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_001159549|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr3_+_88940542_88940546	1.32695	GGCUCAG	AK149508|Pklr|18770|pyruvate kinase liver and red blood cell	NM_001099779|Pklr|18770|pyruvate kinase liver and red blood cell	AK149524|Pklr|18770|pyruvate kinase liver and red blood cell
mm9_v1_chr5_-_124666426_124666426	1.32584	GGCUCAG	AF058693|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2	NM_011256|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2
mm9_v1_chr9_+_43875103_43875168	1.32327	GGCUCAG	NM_198092|Usp2|53376|ubiquitin specific peptidase 2	AK138799|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr15_-_101784712_101784719	1.32108	GGCUCAG	AK146611|Krt78|332131|keratin 78	NM_212487|Krt78|332131|keratin 78
mm9_v1_chr10_+_127114119_127114144	1.31636	GGCUCAG	BC030440|Tmem194|210035|transmembrane protein 194	NM_001113211|Tmem194|210035|transmembrane protein 194	NM_173732|Tmem194|210035|transmembrane protein 194	AK129110|Tmem194|210035|transmembrane protein 194	AK090031|Tmem194|210035|transmembrane protein 194
mm9_v1_chr1_+_173259275_173259328	1.30568	GGCUCAG	NM_001128609|Dedd|21945|death effector domain-containing	NM_011615|Dedd|21945|death effector domain-containing	AK157609|Dedd|21945|death effector domain-containing
mm9_v1_chr2_-_6805937_6806041	1.29514	GGCUCAG	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr9_-_86775154_86775279	1.28655	GGCUCAG	M83985|Snap91|20616|synaptosomal-associated protein 91	NM_013669|Snap91|20616|synaptosomal-associated protein 91	BC031773|Snap91|20616|synaptosomal-associated protein 91	AK159570|Snap91|20616|synaptosomal-associated protein 91	AK147087|Snap91|20616|synaptosomal-associated protein 91
mm9_v1_chr4_+_116667944_116667979	1.2801	GGCUCAG	BC070411|Hectd3|76608|HECT domain containing 3	NM_175244|Hectd3|76608|HECT domain containing 3
mm9_v1_chr1_+_133724553_133724859	1.27618	GGCUCAG	BC096596|Slc41a1|98396|solute carrier family 41, member 1	AK089802|Slc41a1|98396|solute carrier family 41, member 1	NM_173865|Slc41a1|98396|solute carrier family 41, member 1	AK045861|Slc41a1|98396|solute carrier family 41, member 1	AK154819|Slc41a1|98396|solute carrier family 41, member 1	BC042724|Slc41a1|98396|solute carrier family 41, member 1	BC116280|Slc41a1|98396|solute carrier family 41, member 1	BC116281|Slc41a1|98396|solute carrier family 41, member 1	AK039371|Slc41a1|98396|solute carrier family 41, member 1
mm9_v1_chr13_-_41582649_41582707	1.27285	GGCUCAG	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr16_-_32868355_32868453	1.25827	GGCUCAG	BC057307|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK042428|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170223|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK122221|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK030368|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC060601|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	NM_172615|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK170002|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	AK171583|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene	BC067390|1700021K19Rik|100502698|RIKEN cDNA 1700021K19 gene
mm9_v1_chr10_+_41239248_41239438	1.2556	GGCUCAG	AK145131|Cd164|53599|CD164 antigen	AK169275|Cd164|53599|CD164 antigen	AB028895|Cd164|53599|CD164 antigen	NM_016898|Cd164|53599|CD164 antigen	AK018009|Cd164|53599|CD164 antigen	BC005414|Cd164|53599|CD164 antigen	AB014464|Cd164|53599|CD164 antigen	AF299345|Cd164|53599|CD164 antigen	AK194033|Cd164|53599|CD164 antigen
mm9_v1_chr17_+_34066835_34066937	1.25402	GGCUCAG	BC068121|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2	NM_009059|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2	AK144440|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2	U54639|Rgl2|19732|ral guanine nucleotide dissociation stimulator-like 2
mm9_v1_chr11_+_69809250_69809521	1.24796	GGCUCAG	NM_030064|Phf23|78246|PHD finger protein 23	AK019135|Phf23|78246|PHD finger protein 23	AK170729|Phf23|78246|PHD finger protein 23	BC033533|Phf23|78246|PHD finger protein 23	AK031159|Phf23|78246|PHD finger protein 23	AY099326|Phf23|78246|PHD finger protein 23	AY099327|Phf23|78246|PHD finger protein 23
mm9_v1_chr19_+_57435498_57435553	1.24594	GGCUCAG	NM_145505|Fam160b1|226252|family with sequence similarity 160, member B1	AK046518|Fam160b1|226252|family with sequence similarity 160, member B1	AK147386|Fam160b1|226252|family with sequence similarity 160, member B1	AK172373|Fam160b1|226252|family with sequence similarity 160, member B1	AK054539|Fam160b1|226252|family with sequence similarity 160, member B1
mm9_v1_chr19_+_47142217_47142252	1.2422	GGCUCAG	AK031985|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK088953|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_177342|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK169453|Taf5|226182|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr4_-_136512727_136512761	1.24106	GGCUCAG	NM_007939|Epha8|13842|Eph receptor A8	U72207|Epha8|13842|Eph receptor A8
mm9_v1_chr7_-_106331080_106331233	1.23728	GGCUCAG	AF384160|Dgat2|67800|diacylglycerol O-acyltransferase 2	AK016660|Dgat2|67800|diacylglycerol O-acyltransferase 2	BC043447|Dgat2|67800|diacylglycerol O-acyltransferase 2	NM_026384|Dgat2|67800|diacylglycerol O-acyltransferase 2	AK002443|Dgat2|67800|diacylglycerol O-acyltransferase 2
mm9_v1_chr15_-_75672300_75672387	1.2295	GGCUCAG	BC060682|Zc3h3|223642|zinc finger CCCH type containing 3	AJ516034|Zc3h3|223642|zinc finger CCCH type containing 3	BC111448|Zc3h3|223642|zinc finger CCCH type containing 3	NM_172121|Zc3h3|223642|zinc finger CCCH type containing 3	AK138281|Zc3h3|223642|zinc finger CCCH type containing 3
mm9_v1_chr2_-_7002344_7002370	1.22939	GGCUCAG	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr16_+_96502595_96502638	1.2162	GGCUCAG	BC057887|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	NM_033149|B3galt5|93961|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm9_v1_chr1_+_162836541_162836569	1.2138	GGCUCAG	NM_001024952|Rc3h1|381305|RING CCCH (C3H) domains 1	AK139648|Rc3h1|381305|RING CCCH (C3H) domains 1
mm9_v1_chr19_+_10092665_10092824	1.21313	GGCUCAG	NM_144538|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1	AK004767|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1	BC020147|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1
mm9_v1_chrX_+_50144260_50144428	1.21068	GGCUCAG	AK134708|Ccdc160|434778|coiled-coil domain containing 160	NM_001034059|Ccdc160|434778|coiled-coil domain containing 160	BC138946|Ccdc160|434778|coiled-coil domain containing 160	BC138947|Ccdc160|434778|coiled-coil domain containing 160
mm9_v1_chrX_+_71550301_71550377	1.20877	GGCUCAG	NM_010273|Gdi1|14567|guanosine diphosphate (GDP) dissociation inhibitor 1
mm9_v1_chr9_-_107134182_107134239	1.20586	GGCUCAG	AY145302|Dock3|208869|dedicator of cyto-kinesis 3	AK172930|Dock3|208869|dedicator of cyto-kinesis 3	NM_153413|Dock3|208869|dedicator of cyto-kinesis 3
mm9_v1_chr11_-_97914582_97914775	1.18524	GGCUCAG	AJ608761|Stac2|217154|SH3 and cysteine rich domain 2	BC029794|Stac2|217154|SH3 and cysteine rich domain 2	AK144433|Stac2|217154|SH3 and cysteine rich domain 2	AK079357|Stac2|217154|SH3 and cysteine rich domain 2	BC024864|Stac2|217154|SH3 and cysteine rich domain 2	AK078132|Stac2|217154|SH3 and cysteine rich domain 2	NM_146028|Stac2|217154|SH3 and cysteine rich domain 2
mm9_v1_chr8_-_28285056_28285121	1.18388	GGCUCAG	AK014696|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK089792|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	BC125400|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	BC132094|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK166735|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK086797|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK151024|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	AK030769|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	NM_001080813|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)	NM_029423|Rab11fip1|75767|RAB11 family interacting protein 1 (class I)
mm9_v1_chr17_-_35312945_35312945	1.18125	GGCUCAG	AK006184|Aif1|11629|allograft inflammatory factor 1	AK006562|Aif1|11629|allograft inflammatory factor 1	NM_019467|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr18_+_35721811_35721848	1.18112	GGCUCAG	NM_010771|Matr3|17184|matrin 3
mm9_v1_chr7_+_107855215_107855319	1.17642	GGCUCAG	BC079886|Fam168a|319604|family with sequence similarity 168, member A	NM_178764|Fam168a|319604|family with sequence similarity 168, member A	AK043356|Fam168a|319604|family with sequence similarity 168, member A	AK047153|Fam168a|319604|family with sequence similarity 168, member A	AK048559|Fam168a|319604|family with sequence similarity 168, member A	AK051453|Fam168a|319604|family with sequence similarity 168, member A	AK084931|Fam168a|319604|family with sequence similarity 168, member A	AK137424|Fam168a|319604|family with sequence similarity 168, member A
mm9_v1_chr7_+_6948010_6948213	1.16614	GGCUCAG	AF054620|Aurkc|20871|aurora kinase C	NM_001080965|Aurkc|20871|aurora kinase C	NM_001080966|Aurkc|20871|aurora kinase C	NM_020572|Aurkc|20871|aurora kinase C	BC100337|Aurkc|20871|aurora kinase C	BC064780|Aurkc|20871|aurora kinase C
mm9_v1_chr2_-_25174662_25174740	1.15162	GGCUCAG	AK090286|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)	NM_001177656|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)	NM_001177657|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)	NM_008169|Grin1|14810|glutamate receptor, ionotropic, NMDA1 (zeta 1)
mm9_v1_chr8_+_97269489_97269622	1.14321	GGCUCAG	AF052505|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155083|Ccl22|20299|chemokine (C-C motif) ligand 22	AK156627|Ccl22|20299|chemokine (C-C motif) ligand 22	AK170080|Ccl22|20299|chemokine (C-C motif) ligand 22	NM_009137|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155764|Ccl22|20299|chemokine (C-C motif) ligand 22	BC012658|Ccl22|20299|chemokine (C-C motif) ligand 22	AF076596|Ccl22|20299|chemokine (C-C motif) ligand 22	AJ238238|Ccl22|20299|chemokine (C-C motif) ligand 22	AF163476|Ccl22|20299|chemokine (C-C motif) ligand 22
mm9_v1_chr4_-_155608927_155608999	1.12688	GGCUCAG	AY423764|Klhl17|231003|kelch-like 17 (Drosophila)	NM_198305|Klhl17|231003|kelch-like 17 (Drosophila)
mm9_v1_chr7_+_87331726_87331785	1.12183	GGCUCAG	AK145570|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B	NM_013659|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B	AK028896|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B	AK173249|Sema4b|20352|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm9_v1_chr11_-_116274264_116274379	1.11779	GGCUCAG	AK011693|Rnf157|217340|ring finger protein 157	NM_027258|Rnf157|217340|ring finger protein 157
mm9_v1_chr17_+_73267643_73267665	1.10675	GGCUCAG	AK020110|Lbh|77889|limb-bud and heart	NM_029999|Lbh|77889|limb-bud and heart	AF317517|Lbh|77889|limb-bud and heart	BC026827|Lbh|77889|limb-bud and heart	BC052470|Lbh|77889|limb-bud and heart
mm9_v1_chr6_-_82889694_82889743	1.10449	GGCUCAG	AB021291|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC057048|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC090625|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK047067|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC094567|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK035993|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK143196|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_001113481|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_011350|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr14_+_28435613_28435695	1.08864	GGCUCAG	AK147213|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2	BC056760|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2	NM_177814|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2	AK032385|Erc2|238988|ELKS/RAB6-interacting/CAST family member 2
mm9_v1_chrX_-_159081510_159081550	1.04783	GGCUCAG	AY263368|Reps2|194590|RALBP1 associated Eps domain containing protein 2	NM_178256|Reps2|194590|RALBP1 associated Eps domain containing protein 2
mm9_v1_chr6_-_115712483_115712483	1.01171	GGCUCAG	NM_001168256|Tmem40|94346|transmembrane protein 40	NM_001168257|Tmem40|94346|transmembrane protein 40
mm9_v1_chr10_-_77814444_77814444	1.0112	GGCUCAG	AK075715|Agpat3|28169|1-acylglycerol-3-phosphate O-acyltransferase 3	NM_053014|Agpat3|28169|1-acylglycerol-3-phosphate O-acyltransferase 3
mm9_v1_chr15_+_79963548_79963591	1.00857	GGCUCAG	BC114637|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	AB088136|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	BC054369|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	NM_025609|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	BC041110|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1	BC027054|Tab1|66513|TGF-beta activated kinase 1/MAP3K7 binding protein 1
mm9_v1_chr3_+_45182311_45182350	1.00835	GGCUCAG	BC037259|Pcdh10|18526|protocadherin 10	NM_001098170|Pcdh10|18526|protocadherin 10	NM_001098171|Pcdh10|18526|protocadherin 10	NM_001098172|Pcdh10|18526|protocadherin 10	NM_011043|Pcdh10|18526|protocadherin 10	AK081621|Pcdh10|18526|protocadherin 10	AK081977|Pcdh10|18526|protocadherin 10	BC026712|Pcdh10|18526|protocadherin 10	AK122503|Pcdh10|18526|protocadherin 10
mm9_v1_chr5_+_31224206_31224267	1.00157	GGCUCAG	BC013464|Khk|16548|ketohexokinase	NM_008439|Khk|16548|ketohexokinase
mm9_v1_chr14_-_55400722_55400814	1.00147	GGCUCAG	BC059004|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	NM_016972|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	AK044620|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm9_v1_chr11_+_121098532_121098610	0.99111	GGCUCAG	NM_026272|Narf|67608|nuclear prelamin A recognition factor	AK076232|Narf|67608|nuclear prelamin A recognition factor	AK081305|Narf|67608|nuclear prelamin A recognition factor	AK013432|Narf|67608|nuclear prelamin A recognition factor	BC016090|Narf|67608|nuclear prelamin A recognition factor
mm9_v1_chr11_+_98671106_98671158	0.979346	GGCUCAG	NM_138660|Casc3|192160|cancer susceptibility candidate 3	AF526276|Casc3|192160|cancer susceptibility candidate 3
mm9_v1_chr16_+_38362258_38362337	0.973102	GGCUCAG	NM_001081984|Popdc2|64082|popeye domain containing 2	BC064005|Popdc2|64082|popeye domain containing 2	NM_022318|Popdc2|64082|popeye domain containing 2	AK084713|Popdc2|64082|popeye domain containing 2	AF204175|Popdc2|64082|popeye domain containing 2
mm9_v1_chr2_-_26997965_26998000	0.94634	GGCUCAG	AK083284|Fam163b|109349|family with sequence similarity 163, member B	AK162827|Fam163b|109349|family with sequence similarity 163, member B	NM_175427|Fam163b|109349|family with sequence similarity 163, member B
mm9_v1_chr15_-_98438063_98438063	0.931876	GGCUCAG	AK147516|Adcy6|11512|adenylate cyclase 6	NM_007405|Adcy6|11512|adenylate cyclase 6
mm9_v1_chr5_+_145529646_145529663	0.927121	GGCUCAG	NM_001081362|Trrap|100683|transformation/transcription domain-associated protein	AK147241|Trrap|100683|transformation/transcription domain-associated protein
mm9_v1_chr16_+_34785006_34785048	0.9178	GGCUCAG	AY237726|Mylk|107589|myosin, light polypeptide kinase	BC058610|Mylk|107589|myosin, light polypeptide kinase	NM_139300|Mylk|107589|myosin, light polypeptide kinase	BC145279|Mylk|107589|myosin, light polypeptide kinase	BC150749|Mylk|107589|myosin, light polypeptide kinase	BC171954|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr11_-_82704059_82704118	0.913743	GGCUCAG	AK036272|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB007040|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052828|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052829|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052830|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052831|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052832|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052833|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AB052834|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	BC049136|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AK147759|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AF034955|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	EU627687|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	EU627688|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	Y15570|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AK017835|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	AK138553|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)	NM_011235|Rad51l3|19364|RAD51-like 3 (S. cerevisiae)
mm9_v1_chr1_-_91827726_91827753	0.906055	GGCUCAG	L39770|Gbx2|14472|gastrulation brain homeobox 2	NM_010262|Gbx2|14472|gastrulation brain homeobox 2	Z48800|Gbx2|14472|gastrulation brain homeobox 2	BC050989|Gbx2|14472|gastrulation brain homeobox 2
mm9_v1_chr12_-_93024875_93024875	0.899478	GGCUCAG	AK036612|Ston2|108800|stonin 2	NM_175367|Ston2|108800|stonin 2
mm9_v1_chr14_-_41780085_41780217	0.898391	GGCUCAG	BC026574|Tspan14|52588|tetraspanin 14	NM_145928|Tspan14|52588|tetraspanin 14	AK030593|Tspan14|52588|tetraspanin 14	BC025568|Tspan14|52588|tetraspanin 14	BC024611|Tspan14|52588|tetraspanin 14
mm9_v1_chr8_-_74195650_74195661	0.894163	GGCUCAG	NM_001029873|Unc13a|382018|unc-13 homolog A (C. elegans)	AK035920|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr2_-_92274110_92274239	0.890817	GGCUCAG	AB003433|Cry2|12953|cryptochrome 2 (photolyase-like)	AK172994|Cry2|12953|cryptochrome 2 (photolyase-like)	BC054794|Cry2|12953|cryptochrome 2 (photolyase-like)	BC066799|Cry2|12953|cryptochrome 2 (photolyase-like)	AK037778|Cry2|12953|cryptochrome 2 (photolyase-like)	AK041696|Cry2|12953|cryptochrome 2 (photolyase-like)	AF156987|Cry2|12953|cryptochrome 2 (photolyase-like)	AK133781|Cry2|12953|cryptochrome 2 (photolyase-like)	NM_001113333|Cry2|12953|cryptochrome 2 (photolyase-like)	NM_009963|Cry2|12953|cryptochrome 2 (photolyase-like)	AK051524|Cry2|12953|cryptochrome 2 (photolyase-like)
mm9_v1_chr13_-_107812106_107812216	0.879218	GGCUCAG	AK037037|Kif2a|16563|kinesin family member 2A	BC006803|Kif2a|16563|kinesin family member 2A	D12644|Kif2a|16563|kinesin family member 2A	NM_001145779|Kif2a|16563|kinesin family member 2A	NM_008442|Kif2a|16563|kinesin family member 2A
mm9_v1_chr12_-_88541151_88541189	0.874551	GGCUCAG	AK147378|Tmed8|382620|transmembrane emp24 domain containing 8	NM_001033475|Tmed8|382620|transmembrane emp24 domain containing 8
mm9_v1_chr9_-_57454023_57454087	0.855762	GGCUCAG	AY264290|Cplx3|235415|complexin 3	BC016632|Cplx3|235415|complexin 3	BC024854|Cplx3|235415|complexin 3	BC033343|Cplx3|235415|complexin 3	AK044211|Cplx3|235415|complexin 3	BC017128|Cplx3|235415|complexin 3	NM_146223|Cplx3|235415|complexin 3
mm9_v1_chr11_+_77306825_77306918	0.852406	GGCUCAG	BC079870|Git1|216963|G protein-coupled receptor kinase-interactor 1	NM_001004144|Git1|216963|G protein-coupled receptor kinase-interactor 1
mm9_v1_chr19_+_53403902_53404133	0.849206	GGCUCAG	NM_010847|Mxi1|17859|Max interacting protein 1	AK144219|Mxi1|17859|Max interacting protein 1	AK017637|Mxi1|17859|Max interacting protein 1	AK140465|Mxi1|17859|Max interacting protein 1	L38822|Mxi1|17859|Max interacting protein 1	U24674|Mxi1|17859|Max interacting protein 1
mm9_v1_chr18_+_23573908_23573935	0.847601	GGCUCAG	NM_010087|Dtna|13527|dystrobrevin alpha	NM_207650|Dtna|13527|dystrobrevin alpha
mm9_v1_chr16_+_13256573_13256634	0.837476	GGCUCAG	NM_001122667|Mkl2|239719|MKL/myocardin-like 2	X66901|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr14_-_68743060_68743060	0.835745	GGCUCAG	NM_008691|Nefm|18040|neurofilament, medium polypeptide
mm9_v1_chr2_-_118855090_118855134	0.821877	GGCUCAG	AK040670|Ccdc32|269336|coiled-coil domain containing 32	AK133813|Ccdc32|269336|coiled-coil domain containing 32	AK147152|Ccdc32|269336|coiled-coil domain containing 32	BC023926|Ccdc32|269336|coiled-coil domain containing 32	AK132604|Ccdc32|269336|coiled-coil domain containing 32	NM_199310|Ccdc32|269336|coiled-coil domain containing 32
mm9_v1_chrX_+_104871850_104871850	0.818843	GGCUCAG	AK084312|Tbx22|245572|T-box 22	NM_145224|Tbx22|245572|T-box 22
mm9_v1_chr7_+_146038066_146038078	0.801976	GGCUCAG	BC066022|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform	NM_026391|Ppp2r2d|52432|protein phosphatase 2, regulatory subunit B, delta isoform
mm9_v1_chr17_+_29686744_29686746	0.797996	GGCUCAG	BC045600|Tbc1d22b|381085|TBC1 domain family, member 22B	NM_198647|Tbc1d22b|381085|TBC1 domain family, member 22B
mm9_v1_chr13_+_97158248_97158334	0.797145	GGCUCAG	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr12_-_112910475_112910550	0.793664	GGCUCAG	BC106109|Ckb|12709|creatine kinase, brain	BC015271|Ckb|12709|creatine kinase, brain	AK014299|Ckb|12709|creatine kinase, brain	BC058257|Ckb|12709|creatine kinase, brain	AK148885|Ckb|12709|creatine kinase, brain	AK152388|Ckb|12709|creatine kinase, brain	AK153484|Ckb|12709|creatine kinase, brain	AK161990|Ckb|12709|creatine kinase, brain	AK002467|Ckb|12709|creatine kinase, brain	AK165779|Ckb|12709|creatine kinase, brain	AK166980|Ckb|12709|creatine kinase, brain	AK167034|Ckb|12709|creatine kinase, brain	NM_021273|Ckb|12709|creatine kinase, brain
mm9_v1_chr11_+_58768179_58768219	0.784984	GGCUCAG	AK051448|Hist3h2a|319162|histone cluster 3, H2a	AK077568|Hist3h2a|319162|histone cluster 3, H2a	AK082083|Hist3h2a|319162|histone cluster 3, H2a	AK087537|Hist3h2a|319162|histone cluster 3, H2a	NM_178218|Hist3h2a|319162|histone cluster 3, H2a	BC058119|Hist3h2a|319162|histone cluster 3, H2a	BC063781|Hist3h2a|319162|histone cluster 3, H2a
mm9_v1_chr9_+_43877511_43877533	0.780202	GGCUCAG	NM_016808|Usp2|53376|ubiquitin specific peptidase 2	BC017517|Usp2|53376|ubiquitin specific peptidase 2	AY255640|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr4_+_48137778_48137803	0.776315	GGCUCAG	AK014718|Stx17|67727|syntaxin 17	AK154503|Stx17|67727|syntaxin 17	NM_026343|Stx17|67727|syntaxin 17	AK011400|Stx17|67727|syntaxin 17	AK135240|Stx17|67727|syntaxin 17	AK018526|Stx17|67727|syntaxin 17	AK034718|Stx17|67727|syntaxin 17	BC028639|Stx17|67727|syntaxin 17
mm9_v1_chr6_+_146526406_146526495	0.772095	GGCUCAG	AK169380|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK050102|Fgfr1op2|67529|FGFR1 oncogene partner 2	NM_026218|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK151318|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK152617|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK153137|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK004662|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK008983|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK005320|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK169383|Fgfr1op2|67529|FGFR1 oncogene partner 2	AB041650|Fgfr1op2|67529|FGFR1 oncogene partner 2	BC028876|Fgfr1op2|67529|FGFR1 oncogene partner 2	AK159805|Fgfr1op2|67529|FGFR1 oncogene partner 2	BC025085|Fgfr1op2|67529|FGFR1 oncogene partner 2
mm9_v1_chr6_+_119125257_119125415	0.76731	GGCUCAG	AK153860|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	NM_001033379|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	BC141162|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	BC141163|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK050548|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK049193|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK216011|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)	AK047334|Dcp1b|319618|DCP1 decapping enzyme homolog b (S. cerevisiae)
mm9_v1_chr1_+_168931547_168931719	0.766455	GGCUCAG	NM_001160261|Fam78b|226610|family with sequence similarity 78, member B	NM_001160262|Fam78b|226610|family with sequence similarity 78, member B	NM_175461|Fam78b|226610|family with sequence similarity 78, member B	BC132161|Fam78b|226610|family with sequence similarity 78, member B	BC132525|Fam78b|226610|family with sequence similarity 78, member B	AK144212|Fam78b|226610|family with sequence similarity 78, member B	AK047703|Fam78b|226610|family with sequence similarity 78, member B	BC066094|Fam78b|226610|family with sequence similarity 78, member B
mm9_v1_chr1_-_153937364_153937449	0.754338	GGCUCAG	AK144357|LOC545371|545371|hypothetical protein LOC545371	NM_197990|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr7_+_73888389_73888582	0.749974	GGCUCAG	NM_001164201|Lass3|545975|LAG1 homolog, ceramide synthase 3	DQ646881|Lass3|545975|LAG1 homolog, ceramide synthase 3
mm9_v1_chr10_+_96079634_96079769	0.749032	GGCUCAG	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chr17_+_56301899_56301970	0.739513	GGCUCAG	AK090348|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	NM_025566|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK150678|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK153177|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK011245|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1	AK136962|Tnfaip8l1|66443|tumor necrosis factor, alpha-induced protein 8-like 1
mm9_v1_chr5_+_36546669_36546706	0.738819	GGCUCAG	NM_175249|Psapl1|76943|prosaposin-like 1	AK028455|Psapl1|76943|prosaposin-like 1	AK078699|Psapl1|76943|prosaposin-like 1	BC119540|Psapl1|76943|prosaposin-like 1	BC148306|Psapl1|76943|prosaposin-like 1
mm9_v1_chr3_-_68930928_68931049	0.73517	GGCUCAG	BC052162|Kpna4|16649|karyopherin (importin) alpha 4	NM_008467|Kpna4|16649|karyopherin (importin) alpha 4	AK147920|Kpna4|16649|karyopherin (importin) alpha 4
mm9_v1_chr12_-_86311718_86311851	0.730572	GGCUCAG	BC057351|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	BC079590|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147878|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK154529|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147491|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	NM_178065|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene
mm9_v1_chr15_+_81065928_81066000	0.71933	GGCUCAG	NM_145132|Mchr1|207911|melanin-concentrating hormone receptor 1
mm9_v1_chrX_-_101017286_101017329	0.717402	GGCUCAG	AF045692|Slc16a2|20502|solute carrier family 16 (monocarboxylic acid transporters), member 2	NM_009197|Slc16a2|20502|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm9_v1_chr10_-_58138401_58138443	0.714969	GGCUCAG	BC068315|Edar|13608|ectodysplasin-A receptor	AF160502|Edar|13608|ectodysplasin-A receptor	NM_010100|Edar|13608|ectodysplasin-A receptor
mm9_v1_chr15_+_80502276_80502298	0.707943	GGCUCAG	AK145865|Fam83f|213956|family with sequence similarity 83, member F	NM_145986|Fam83f|213956|family with sequence similarity 83, member F	AK030342|Fam83f|213956|family with sequence similarity 83, member F	BC016600|Fam83f|213956|family with sequence similarity 83, member F
mm9_v1_chr2_+_70956105_70956168	0.694416	GGCUCAG	AK029112|Cybrd1|73649|cytochrome b reductase 1	NM_028593|Cybrd1|73649|cytochrome b reductase 1	AK008849|Cybrd1|73649|cytochrome b reductase 1	AF354666|Cybrd1|73649|cytochrome b reductase 1
mm9_v1_chr7_+_13466525_13466568	0.68742	GGCUCAG	AK132244|Zfp128|243833|zinc finger protein 128	AK035906|Zfp128|243833|zinc finger protein 128	NM_153802|Zfp128|243833|zinc finger protein 128	AK032046|Zfp128|243833|zinc finger protein 128	BC088998|Zfp128|243833|zinc finger protein 128	BC094248|Zfp128|243833|zinc finger protein 128	AF480861|Zfp128|243833|zinc finger protein 128
mm9_v1_chr2_-_118375365_118375421	0.675369	GGCUCAG	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chrX_+_104863302_104863302	0.672043	GGCUCAG	AF516208|Tbx22|245572|T-box 22	NM_181319|Tbx22|245572|T-box 22
mm9_v1_chr6_-_115685120_115685120	0.665377	GGCUCAG	NM_001168258|Tmem40|94346|transmembrane protein 40
mm9_v1_chr15_+_79521293_79521438	0.658615	GGCUCAG	AK150068|Gtpbp1|14904|GTP binding protein 1	AK150185|Gtpbp1|14904|GTP binding protein 1	AK158342|Gtpbp1|14904|GTP binding protein 1	AK004612|Gtpbp1|14904|GTP binding protein 1	AK147717|Gtpbp1|14904|GTP binding protein 1	AK170091|Gtpbp1|14904|GTP binding protein 1	BC046228|Gtpbp1|14904|GTP binding protein 1	NM_013818|Gtpbp1|14904|GTP binding protein 1	U87965|Gtpbp1|14904|GTP binding protein 1
mm9_v1_chr17_-_46624611_46624627	0.658496	GGCUCAG	NM_001162864|Ttbk1|106763|tau tubulin kinase 1
mm9_v1_chr6_+_103460834_103460869	0.65558	GGCUCAG	AK040765|Chl1|12661|cell adhesion molecule with homology to L1CAM	NM_007697|Chl1|12661|cell adhesion molecule with homology to L1CAM
mm9_v1_chr2_+_172171015_172171168	0.655383	GGCUCAG	AK160529|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	NM_025912|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	BC016210|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	BC057642|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK147935|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK084415|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK148213|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK076087|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK008190|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK148334|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK148435|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene	AK149497|2010011I20Rik|67017|RIKEN cDNA 2010011I20 gene
mm9_v1_chr2_+_151907264_151907264	0.642616	GGCUCAG	NM_001160410|Scrt2|545474|scratch homolog 2, zinc finger protein (Drosophila)
mm9_v1_chrX_+_98835386_98835624	0.633865	GGCUCAG	AK076418|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_139144|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AK163296|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC025097|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC057319|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC037194|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	BC055851|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AF363030|Ogt|108155|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm9_v1_chr6_-_115684968_115684968	0.621989	GGCUCAG	AK078864|Tmem40|94346|transmembrane protein 40	NM_001168259|Tmem40|94346|transmembrane protein 40
mm9_v1_chr7_-_150688407_150688430	0.617123	GGCUCAG	BC019141|Phlda2|22113|pleckstrin homology-like domain, family A, member 2	Y15443|Phlda2|22113|pleckstrin homology-like domain, family A, member 2	NM_009434|Phlda2|22113|pleckstrin homology-like domain, family A, member 2	AK131929|Phlda2|22113|pleckstrin homology-like domain, family A, member 2
mm9_v1_chr11_+_98219687_98219740	0.616176	GGCUCAG	NM_021547|Stard3|59045|START domain containing 3	X82457|Stard3|59045|START domain containing 3	AK041538|Stard3|59045|START domain containing 3	AK150166|Stard3|59045|START domain containing 3	AK150254|Stard3|59045|START domain containing 3
mm9_v1_chr1_-_173987681_173987726	0.603802	GGCUCAG	M82874|Nhlh1|18071|nescient helix loop helix 1	BC051018|Nhlh1|18071|nescient helix loop helix 1	BC054760|Nhlh1|18071|nescient helix loop helix 1	AK149315|Nhlh1|18071|nescient helix loop helix 1	NM_010916|Nhlh1|18071|nescient helix loop helix 1
mm9_v1_chr17_+_47748530_47748580	0.597908	GGCUCAG	AK041624|Med20|56771|mediator complex subunit 20	AK019130|Med20|56771|mediator complex subunit 20	AK043396|Med20|56771|mediator complex subunit 20	AK146345|Med20|56771|mediator complex subunit 20	NM_020048|Med20|56771|mediator complex subunit 20	AK031504|Med20|56771|mediator complex subunit 20	BC060122|Med20|56771|mediator complex subunit 20	AK141369|Med20|56771|mediator complex subunit 20	AJ245617|Med20|56771|mediator complex subunit 20
mm9_v1_chr19_+_38339167_38339370	0.595879	GGCUCAG	AK045443|Lgi1|56839|leucine-rich repeat LGI family, member 1	BC066090|Lgi1|56839|leucine-rich repeat LGI family, member 1	NM_020278|Lgi1|56839|leucine-rich repeat LGI family, member 1	AF246818|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK035873|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK031996|Lgi1|56839|leucine-rich repeat LGI family, member 1
mm9_v1_chr19_+_5041341_5041422	0.591249	GGCUCAG	AF233580|Brms1|107392|breast cancer metastasis-suppressor 1	AK076729|Brms1|107392|breast cancer metastasis-suppressor 1	BC016108|Brms1|107392|breast cancer metastasis-suppressor 1	NM_134155|Brms1|107392|breast cancer metastasis-suppressor 1	BC003485|Brms1|107392|breast cancer metastasis-suppressor 1
mm9_v1_chr19_+_9004106_9004187	0.58512	GGCUCAG	BC023878|Eml3|225898|echinoderm microtubule associated protein like 3	BC022146|Eml3|225898|echinoderm microtubule associated protein like 3	NM_144872|Eml3|225898|echinoderm microtubule associated protein like 3
mm9_v1_chr13_-_3917356_3917465	0.578953	GGCUCAG	AF094520|Net1|56349|neuroepithelial cell transforming gene 1	AK077728|Net1|56349|neuroepithelial cell transforming gene 1	NM_019671|Net1|56349|neuroepithelial cell transforming gene 1
mm9_v1_chr14_+_35487052_35487113	0.573975	GGCUCAG	AK046038|Wapal|218914|wings apart-like homolog (Drosophila)	AK129105|Wapal|218914|wings apart-like homolog (Drosophila)	NM_001004436|Wapal|218914|wings apart-like homolog (Drosophila)
mm9_v1_chr15_+_78707595_78707620	0.568076	GGCUCAG	BC026802|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1	NM_145929|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1
mm9_v1_chr6_+_115084919_115085009	0.566555	GGCUCAG	AF096867|Syn2|20965|synapsin II	NM_001111015|Syn2|20965|synapsin II	NM_013681|Syn2|20965|synapsin II	BC053427|Syn2|20965|synapsin II
mm9_v1_chr12_+_85981968_85981968	0.559304	GGCUCAG	NM_001168589|Vrtn|432677|vertebrae development homolog (pig)
mm9_v1_chr6_-_3714466_3714712	0.556574	GGCUCAG	AK162391|Calcr|12311|calcitonin receptor	U18542|Calcr|12311|calcitonin receptor	AK039161|Calcr|12311|calcitonin receptor	AK138275|Calcr|12311|calcitonin receptor	NM_007588|Calcr|12311|calcitonin receptor
mm9_v1_chrX_-_7318412_7318449	0.546969	GGCUCAG	BC053918|Ccdc120|54648|coiled-coil domain containing 120	NM_207202|Ccdc120|54648|coiled-coil domain containing 120
mm9_v1_chr8_+_63702967_63703040	0.544658	GGCUCAG	NM_021506|Sh3rf1|59009|SH3 domain containing ring finger 1	BC060113|Sh3rf1|59009|SH3 domain containing ring finger 1	BC060696|Sh3rf1|59009|SH3 domain containing ring finger 1	AK088003|Sh3rf1|59009|SH3 domain containing ring finger 1	AK148137|Sh3rf1|59009|SH3 domain containing ring finger 1
mm9_v1_chr8_-_37796104_37796107	0.535017	GGCUCAG	AK147539|Dlc1|50768|deleted in liver cancer 1	NM_001194941|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr3_+_94736993_94737043	0.531446	GGCUCAG	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr13_+_105077914_105078054	0.528683	GGCUCAG	AK030315|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	AK044528|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	NM_001081020|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	BC172116|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm9_v1_chr8_-_114045980_114046012	0.528607	GGCUCAG	BC066082|Wdr59|319481|WD repeat domain 59	EF011622|Wdr59|319481|WD repeat domain 59	AK170910|Wdr59|319481|WD repeat domain 59	NM_001170742|Wdr59|319481|WD repeat domain 59	NM_001170743|Wdr59|319481|WD repeat domain 59	NM_176923|Wdr59|319481|WD repeat domain 59
mm9_v1_chr9_+_46076689_46076697	0.527448	GGCUCAG	AF327059|Apoa5|66113|apolipoprotein A-V	NM_080434|Apoa5|66113|apolipoprotein A-V
mm9_v1_chr7_+_148317160_148317300	0.525788	GGCUCAG	AK036368|Ptdss2|27388|phosphatidylserine synthase 2	NM_013782|Ptdss2|27388|phosphatidylserine synthase 2	AK031906|Ptdss2|27388|phosphatidylserine synthase 2	AK048026|Ptdss2|27388|phosphatidylserine synthase 2	AK081275|Ptdss2|27388|phosphatidylserine synthase 2	AK021249|Ptdss2|27388|phosphatidylserine synthase 2	AK032686|Ptdss2|27388|phosphatidylserine synthase 2	AK137415|Ptdss2|27388|phosphatidylserine synthase 2	BC053517|Ptdss2|27388|phosphatidylserine synthase 2	AF099053|Ptdss2|27388|phosphatidylserine synthase 2
mm9_v1_chr18_-_62708343_62708418	0.525064	GGCUCAG	AK031096|Fbxo38|107035|F-box protein 38	BC056348|Fbxo38|107035|F-box protein 38	AK089046|Fbxo38|107035|F-box protein 38	NM_134136|Fbxo38|107035|F-box protein 38
mm9_v1_chr18_+_14941735_14941757	0.522229	GGCUCAG	AK012135|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001100449|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr12_+_85983504_85983504	0.521961	GGCUCAG	NM_001168588|Vrtn|432677|vertebrae development homolog (pig)
mm9_v1_chr2_-_79969429_79969614	0.514686	GGCUCAG	AK050004|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001159582|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK021279|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr1_-_24594228_24594275	0.510636	GGCUCAG	BC118970|Col19a1|12823|collagen, type XIX, alpha 1	AB000636|Col19a1|12823|collagen, type XIX, alpha 1	AK149136|Col19a1|12823|collagen, type XIX, alpha 1	NM_007733|Col19a1|12823|collagen, type XIX, alpha 1
mm9_v1_chr11_-_68770359_68770398	0.506726	GGCUCAG	BC089365|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15	NM_177566|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15
mm9_v1_chr9_+_56266618_56266679	0.502234	GGCUCAG	AK088542|Hmg20a|66867|high mobility group 20A	AK032790|Hmg20a|66867|high mobility group 20A	AK039222|Hmg20a|66867|high mobility group 20A	AK004596|Hmg20a|66867|high mobility group 20A	AK086346|Hmg20a|66867|high mobility group 20A	AK154075|Hmg20a|66867|high mobility group 20A	BC013804|Hmg20a|66867|high mobility group 20A	DQ182735|Hmg20a|66867|high mobility group 20A	NM_025812|Hmg20a|66867|high mobility group 20A	AL355705|Hmg20a|66867|high mobility group 20A
mm9_v1_chr5_+_8056508_8056593	0.497834	GGCUCAG	AK134747|Sri|109552|sorcin	NM_001080974|Sri|109552|sorcin	AK146071|Sri|109552|sorcin	AK146911|Sri|109552|sorcin	AK168572|Sri|109552|sorcin	AK168792|Sri|109552|sorcin	AK168900|Sri|109552|sorcin	BC065790|Sri|109552|sorcin
mm9_v1_chr11_-_97436439_97436456	0.492369	GGCUCAG	AF040944|Srcin1|56013|SRC kinase signaling inhibitor 1	NM_018873|Srcin1|56013|SRC kinase signaling inhibitor 1	U59873|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chrX_+_157600681_157600703	0.488787	GGCUCAG	AK040521|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	AK031490|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	NM_133194|Scml2|107815|sex comb on midleg-like 2 (Drosophila)
mm9_v1_chr10_-_80488111_80488155	0.486483	GGCUCAG	AK081336|Diras1|208666|DIRAS family, GTP-binding RAS-like 1	BC057556|Diras1|208666|DIRAS family, GTP-binding RAS-like 1	NM_145217|Diras1|208666|DIRAS family, GTP-binding RAS-like 1
mm9_v1_chr7_+_86198368_86198368	0.478219	GGCUCAG	L07049|Acan|11595|aggrecan	NM_007424|Acan|11595|aggrecan
mm9_v1_chr11_-_33743416_33743626	0.472351	GGCUCAG	AY647242|Kcnip1|70357|Kv channel-interacting protein 1	AY171234|Kcnip1|70357|Kv channel-interacting protein 1	BC034241|Kcnip1|70357|Kv channel-interacting protein 1	DQ148493|Kcnip1|70357|Kv channel-interacting protein 1	AK013657|Kcnip1|70357|Kv channel-interacting protein 1	AK014313|Kcnip1|70357|Kv channel-interacting protein 1	AK046398|Kcnip1|70357|Kv channel-interacting protein 1	AK045948|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190885|Kcnip1|70357|Kv channel-interacting protein 1	NM_027398|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr19_+_53674862_53674958	0.46555	GGCUCAG	AK165878|Smc3|13006|structural maintenace of chromosomes 3	NM_007790|Smc3|13006|structural maintenace of chromosomes 3	AK164387|Smc3|13006|structural maintenace of chromosomes 3	AK143996|Smc3|13006|structural maintenace of chromosomes 3	AK140705|Smc3|13006|structural maintenace of chromosomes 3	BC062935|Smc3|13006|structural maintenace of chromosomes 3	AF141294|Smc3|13006|structural maintenace of chromosomes 3	AF047601|Smc3|13006|structural maintenace of chromosomes 3
mm9_v1_chr9_+_65756816_65756864	0.465471	GGCUCAG	AK090262|Csnk1g1|214897|casein kinase 1, gamma 1	NM_173185|Csnk1g1|214897|casein kinase 1, gamma 1	AK050473|Csnk1g1|214897|casein kinase 1, gamma 1	AK149310|Csnk1g1|214897|casein kinase 1, gamma 1
mm9_v1_chr1_+_74708306_74708411	0.463933	GGCUCAG	BC085151|Ttll4|67534|tubulin tyrosine ligase-like family, member 4	NM_001014974|Ttll4|67534|tubulin tyrosine ligase-like family, member 4
mm9_v1_chr4_+_135762279_135762338	0.460127	GGCUCAG	NM_001008232|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3	AK132294|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3	BC085250|Asap3|230837|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
mm9_v1_chr4_-_149329097_149329154	0.438313	GGCUCAG	AK089767|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	AK160081|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	AK172334|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	BC046787|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	BC057563|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	NM_029035|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	AK030417|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	AK047726|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	AK003707|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1	AK040909|Spsb1|74646|splA/ryanodine receptor domain and SOCS box containing 1
mm9_v1_chr5_-_36826896_36826947	0.43601	GGCUCAG	NM_001170454|Tada2b|231151|transcriptional adaptor 2B
mm9_v1_chr15_+_85036434_85036600	0.429687	GGCUCAG	AK083573|Fbln1|14114|fibulin 1	AK086451|Fbln1|14114|fibulin 1	NM_010180|Fbln1|14114|fibulin 1	X70854|Fbln1|14114|fibulin 1	AK035388|Fbln1|14114|fibulin 1	AK159646|Fbln1|14114|fibulin 1	AK085989|Fbln1|14114|fibulin 1	AK137511|Fbln1|14114|fibulin 1	EU543224|Fbln1|14114|fibulin 1	BC007140|Fbln1|14114|fibulin 1	AK183901|Fbln1|14114|fibulin 1	AK188770|Fbln1|14114|fibulin 1
mm9_v1_chr11_-_94644016_94644016	0.421315	GGCUCAG	AK139848|Tmem92-ps|544806|transmembrane protein 92, pseudogene	NM_001034896|Tmem92-ps|544806|transmembrane protein 92, pseudogene
mm9_v1_chr10_-_118305958_118305958	0.413035	GGCUCAG	BC085145|Dyrk2|69181|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2	NM_001014390|Dyrk2|69181|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm9_v1_chr9_-_103267226_103267309	0.40636	GGCUCAG	AK172053|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	BC031362|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	NM_001134427|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	AK048941|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3
mm9_v1_chr7_+_4691716_4691802	0.404785	GGCUCAG	AY555193|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	NM_001115018|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	NM_146177|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	AK154848|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	AK137449|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	BC024816|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm9_v1_chr3_-_88229007_88229060	0.401887	GGCUCAG	BC052771|Slc25a44|229517|solute carrier family 25, member 44	AK166331|Slc25a44|229517|solute carrier family 25, member 44	AK169886|Slc25a44|229517|solute carrier family 25, member 44	AK044648|Slc25a44|229517|solute carrier family 25, member 44	AK046586|Slc25a44|229517|solute carrier family 25, member 44	AK079532|Slc25a44|229517|solute carrier family 25, member 44	AK165159|Slc25a44|229517|solute carrier family 25, member 44	AK083470|Slc25a44|229517|solute carrier family 25, member 44	AK083273|Slc25a44|229517|solute carrier family 25, member 44	AK144731|Slc25a44|229517|solute carrier family 25, member 44	AK166011|Slc25a44|229517|solute carrier family 25, member 44	AK168955|Slc25a44|229517|solute carrier family 25, member 44	AK032960|Slc25a44|229517|solute carrier family 25, member 44	AK134914|Slc25a44|229517|solute carrier family 25, member 44	NM_001145876|Slc25a44|229517|solute carrier family 25, member 44	NM_001145877|Slc25a44|229517|solute carrier family 25, member 44	NM_178696|Slc25a44|229517|solute carrier family 25, member 44
mm9_v1_chr8_-_44226818_44226839	0.394818	GGCUCAG	BC141202|Triml1|244448|tripartite motif family-like 1	BC145531|Triml1|244448|tripartite motif family-like 1	AK077092|Triml1|244448|tripartite motif family-like 1	NM_177742|Triml1|244448|tripartite motif family-like 1
mm9_v1_chr9_+_21742717_21742717	0.394292	GGCUCAG	AY438023|BC018242|235044|cDNA sequence BC018242	BC018242|BC018242|235044|cDNA sequence BC018242	NM_144935|BC018242|235044|cDNA sequence BC018242
mm9_v1_chr5_-_92739036_92739049	0.389886	GGCUCAG	AK029881|Sdad1|231452|SDA1 domain containing 1	NM_172713|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr17_+_34745958_34745958	0.384284	GGCUCAG	BC009651|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	NM_018862|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm9_v1_chr1_-_164408133_164408164	0.382103	GGCUCAG	AK035951|Dnm3|103967|dynamin 3	NM_001038619|Dnm3|103967|dynamin 3	AK049724|Dnm3|103967|dynamin 3	NM_172646|Dnm3|103967|dynamin 3
mm9_v1_chr5_-_148537561_148537595	0.377806	GGCUCAG	X78568|Flt1|14254|FMS-like tyrosine kinase 1	D88689|Flt1|14254|FMS-like tyrosine kinase 1	D88690|Flt1|14254|FMS-like tyrosine kinase 1	NM_010228|Flt1|14254|FMS-like tyrosine kinase 1	AK005502|Flt1|14254|FMS-like tyrosine kinase 1	AK013236|Flt1|14254|FMS-like tyrosine kinase 1	AK167596|Flt1|14254|FMS-like tyrosine kinase 1	AK146906|Flt1|14254|FMS-like tyrosine kinase 1
mm9_v1_chr16_+_78301923_78302076	0.374913	GGCUCAG	NM_001025192|Cxadr|13052|coxsackie virus and adenovirus receptor	NM_009988|Cxadr|13052|coxsackie virus and adenovirus receptor	AK004908|Cxadr|13052|coxsackie virus and adenovirus receptor	AK145569|Cxadr|13052|coxsackie virus and adenovirus receptor	AK160457|Cxadr|13052|coxsackie virus and adenovirus receptor	BC016457|Cxadr|13052|coxsackie virus and adenovirus receptor	BC004680|Cxadr|13052|coxsackie virus and adenovirus receptor	U90715|Cxadr|13052|coxsackie virus and adenovirus receptor	Y10320|Cxadr|13052|coxsackie virus and adenovirus receptor
mm9_v1_chr6_-_87759747_87759783	0.369524	GGCUCAG	NM_133717|Rab43|69834|RAB43, member RAS oncogene family	BC010248|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr14_+_29831283_29831689	0.368938	GGCUCAG	NM_176920|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	AK044492|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	AK138618|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	BC099587|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	BC132594|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1	BC145990|Lrtm1|319476|leucine-rich repeats and transmembrane domains 1
mm9_v1_chr1_-_156573049_156573160	0.356897	GGCUCAG	NM_009782|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit	BC150750|Cacna1e|12290|calcium channel, voltage-dependent, R type, alpha 1E subunit
mm9_v1_chr4_-_33037783_33037814	0.356355	GGCUCAG	AK135024|Ankrd6|140577|ankyrin repeat domain 6	NM_001012451|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr6_+_90319485_90319663	0.352777	GGCUCAG	AK081005|Zxdc|80292|ZXD family zinc finger C	NM_030260|Zxdc|80292|ZXD family zinc finger C	NM_173002|Zxdc|80292|ZXD family zinc finger C	BC003332|Zxdc|80292|ZXD family zinc finger C	AK042190|Zxdc|80292|ZXD family zinc finger C	AK044529|Zxdc|80292|ZXD family zinc finger C	AK030287|Zxdc|80292|ZXD family zinc finger C	AK047538|Zxdc|80292|ZXD family zinc finger C	AK042392|Zxdc|80292|ZXD family zinc finger C	AK080307|Zxdc|80292|ZXD family zinc finger C	AK044429|Zxdc|80292|ZXD family zinc finger C	AK044948|Zxdc|80292|ZXD family zinc finger C	AK169517|Zxdc|80292|ZXD family zinc finger C	AK047079|Zxdc|80292|ZXD family zinc finger C	AK137347|Zxdc|80292|ZXD family zinc finger C	AK141613|Zxdc|80292|ZXD family zinc finger C
mm9_v1_chr6_-_94233855_94233910	0.349279	GGCUCAG	AK046635|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC095943|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001029850|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_010367|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK147358|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr5_+_34916343_34916517	0.348618	GGCUCAG	NM_001024458|Add1|11518|adducin 1 (alpha)	NM_001102444|Add1|11518|adducin 1 (alpha)	NM_013457|Add1|11518|adducin 1 (alpha)	AF096839|Add1|11518|adducin 1 (alpha)	AK079960|Add1|11518|adducin 1 (alpha)	AK054558|Add1|11518|adducin 1 (alpha)
mm9_v1_chr7_-_116651647_116651647	0.346398	GGCUCAG	AY572454|Trim66|330627|tripartite motif-containing 66	AY572455|Trim66|330627|tripartite motif-containing 66	NM_001170912|Trim66|330627|tripartite motif-containing 66	NM_181853|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr8_+_109555200_109555247	0.340027	GGCUCAG	AK159117|Vps4a|116733|vacuolar protein sorting 4a (yeast)	AK047821|Vps4a|116733|vacuolar protein sorting 4a (yeast)	BC018368|Vps4a|116733|vacuolar protein sorting 4a (yeast)	NM_126165|Vps4a|116733|vacuolar protein sorting 4a (yeast)	AK169949|Vps4a|116733|vacuolar protein sorting 4a (yeast)
mm9_v1_chr10_-_120748244_120748244	0.338032	GGCUCAG	NM_029057|Tbc1d30|74694|TBC1 domain family, member 30
mm9_v1_chr17_-_56273265_56273275	0.337355	GGCUCAG	AK166077|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	NM_013662|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm9_v1_chr10_-_83111346_83111470	0.335663	GGCUCAG	BC048906|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK171512|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK168748|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK168403|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK160105|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK160075|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AY113706|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	NM_145220|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK161003|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	AK154525|Appl2|216190|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
mm9_v1_chr5_-_23122181_23122418	0.320307	GGCUCAG	AB006036|Srpk2|20817|serine/arginine-rich protein specific kinase 2	BC020178|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK136861|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK169580|Srpk2|20817|serine/arginine-rich protein specific kinase 2	NM_009274|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr9_-_65239349_65239458	0.315455	GGCUCAG	AK048611|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	BC139793|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	NM_028974|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13
mm9_v1_chr6_-_93863547_93863683	0.30769	GGCUCAG	AK163800|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083321|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	BC060273|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	NM_001083320|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr6_+_86992796_86992906	0.304651	GGCUCAG	AK087173|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	NM_013528|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK019852|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AK039792|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC050762|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	AF334736|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1	BC010516|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr1_+_87942437_87942543	0.300712	GGCUCAG	BC137675|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	BC144821|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144992|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144993|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene
mm9_v1_chr6_+_87680862_87680866	0.292482	GGCUCAG	AB041550|Ccdc48|58229|coiled-coil domain containing 48	NM_001159697|Ccdc48|58229|coiled-coil domain containing 48	BC139438|Ccdc48|58229|coiled-coil domain containing 48	BC139439|Ccdc48|58229|coiled-coil domain containing 48
mm9_v1_chr2_+_154262114_154262265	0.29205	GGCUCAG	AK148027|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_009823|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_172860|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK040403|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	DQ213025|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC064679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK049206|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr11_-_94693315_94693315	0.285582	GGCUCAG	NM_001163172|Tmem92-ps|544806|transmembrane protein 92, pseudogene
mm9_v1_chr13_-_21622917_21622982	0.271113	GGCUCAG	BC050152|Zfp192|93681|zinc finger protein 192	AK032718|Zfp192|93681|zinc finger protein 192	AK134299|Zfp192|93681|zinc finger protein 192	NM_139141|Zfp192|93681|zinc finger protein 192
mm9_v1_chr1_-_72921438_72921462	0.266415	GGCUCAG	BC057447|Igfbp5|16011|insulin-like growth factor binding protein 5	NM_010518|Igfbp5|16011|insulin-like growth factor binding protein 5	AK142108|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr5_+_30890386_30890554	0.261585	GGCUCAG	AF065162|Kcnk3|16527|potassium channel, subfamily K, member 3	BC032047|Kcnk3|16527|potassium channel, subfamily K, member 3	NM_010608|Kcnk3|16527|potassium channel, subfamily K, member 3	AB013345|Kcnk3|16527|potassium channel, subfamily K, member 3
mm9_v1_chr5_-_31522889_31523027	0.257987	GGCUCAG	BC009004|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	NM_008014|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chrX_+_100551808_100551914	0.256631	GGCUCAG	NM_009767|Chic1|12212|cysteine-rich hydrophobic domain 1	AK034427|Chic1|12212|cysteine-rich hydrophobic domain 1	AK135974|Chic1|12212|cysteine-rich hydrophobic domain 1	Y11896|Chic1|12212|cysteine-rich hydrophobic domain 1	BC132322|Chic1|12212|cysteine-rich hydrophobic domain 1	BC138730|Chic1|12212|cysteine-rich hydrophobic domain 1	AK013993|Chic1|12212|cysteine-rich hydrophobic domain 1
mm9_v1_chr15_+_88906446_88906550	0.252062	GGCUCAG	NM_026485|Trabd|67976|TraB domain containing	AK017745|Trabd|67976|TraB domain containing	AK146027|Trabd|67976|TraB domain containing	AK005300|Trabd|67976|TraB domain containing
mm9_v1_chr2_-_32286633_32286688	0.250319	GGCUCAG	BC066998|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_001164358|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr18_-_73914084_73914137	0.250179	GGCUCAG	BC019371|Elac1|114615|elaC homolog 1 (E. coli)	AF308697|Elac1|114615|elaC homolog 1 (E. coli)	NM_053255|Elac1|114615|elaC homolog 1 (E. coli)
mm9_v1_chr5_-_93635416_93635523	0.243079	GGCUCAG	AK177544|Ccni|12453|cyclin I	AK079476|Ccni|12453|cyclin I	AK152614|Ccni|12453|cyclin I	AK050465|Ccni|12453|cyclin I	NM_017367|Ccni|12453|cyclin I
mm9_v1_chr2_+_30247921_30247956	0.239321	GGCUCAG	AB030189|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK002544|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK044141|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK088065|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	NM_020329|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	AK053923|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1	BC026544|Dolpp1|57170|dolichyl pyrophosphate phosphatase 1
mm9_v1_chr7_-_123174560_123174560	0.236228	GGCUCAG	AK030713|Sox6|20679|SRY-box containing gene 6	NM_001025560|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr7_-_117103903_117104016	0.234201	GGCUCAG	AJ245569|Dennd5a|19347|DENN/MADD domain containing 5A	BC060230|Dennd5a|19347|DENN/MADD domain containing 5A	NM_021494|Dennd5a|19347|DENN/MADD domain containing 5A
mm9_v1_chr6_-_29162226_29162288	0.229765	GGCUCAG	BC053416|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1	NM_011829|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr15_+_37162790_37162813	0.228686	GGCUCAG	AK002633|Grhl2|252973|grainyhead-like 2 (Drosophila)	NM_026496|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr7_-_123182257_123182257	0.227566	GGCUCAG	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr11_-_64976408_64976473	0.221541	GGCUCAG	BC056366|Arhgap44|216831|Rho GTPase activating protein 44	BC059911|Arhgap44|216831|Rho GTPase activating protein 44	NM_001099288|Arhgap44|216831|Rho GTPase activating protein 44	NM_175003|Arhgap44|216831|Rho GTPase activating protein 44
mm9_v1_chr6_-_3713622_3713622	0.220041	GGCUCAG	AK133983|Calcr|12311|calcitonin receptor	NM_001042725|Calcr|12311|calcitonin receptor
mm9_v1_chr17_+_26275630_26275910	0.217938	GGCUCAG	NM_001159598|Axin1|12005|axin 1	NM_009733|Axin1|12005|axin 1	AF009011|Axin1|12005|axin 1	BC113171|Axin1|12005|axin 1	BC011544|Axin1|12005|axin 1
mm9_v1_chr8_-_122625167_122625371	0.216143	GGCUCAG	AK170923|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK172462|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK089681|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK090333|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK170639|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK157968|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK041905|Zdhhc7|102193|zinc finger, DHHC domain containing 7	BC075666|Zdhhc7|102193|zinc finger, DHHC domain containing 7	NM_133967|Zdhhc7|102193|zinc finger, DHHC domain containing 7
mm9_v1_chr2_-_35960774_35960927	0.185915	GGCUCAG	AK090339|Lhx6|16874|LIM homeobox protein 6	AJ000337|Lhx6|16874|LIM homeobox protein 6	AK140987|Lhx6|16874|LIM homeobox protein 6	NM_001083125|Lhx6|16874|LIM homeobox protein 6	NM_008500|Lhx6|16874|LIM homeobox protein 6
mm9_v1_chr11_+_57458925_57459050	0.184315	GGCUCAG	AK162424|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	NM_134189|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK143714|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK159362|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK159088|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	BC060617|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK131155|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK172609|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10
mm9_v1_chr8_+_109394141_109394246	0.181383	GGCUCAG	NM_008217|Has3|15118|hyaluronan synthase 3	U86408|Has3|15118|hyaluronan synthase 3	BC138152|Has3|15118|hyaluronan synthase 3	BC138161|Has3|15118|hyaluronan synthase 3
mm9_v1_chr4_+_140976693_140976693	0.175321	GGCUCAG	AK030025|Hspb7|29818|heat shock protein family, member 7 (cardiovascular)	NM_013868|Hspb7|29818|heat shock protein family, member 7 (cardiovascular)
mm9_v1_chr11_-_77421308_77421363	0.172772	GGCUCAG	AK143530|Taok1|216965|TAO kinase 1	NM_144825|Taok1|216965|TAO kinase 1
mm9_v1_chr7_-_3645124_3645179	0.172155	GGCUCAG	AK154606|Mboat7|77582|membrane bound O-acyltransferase domain containing 7	AB055410|Mboat7|77582|membrane bound O-acyltransferase domain containing 7	NM_029934|Mboat7|77582|membrane bound O-acyltransferase domain containing 7
mm9_v1_chr11_+_72609717_72609729	0.167994	GGCUCAG	AK158924|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1	NM_001045536|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1
mm9_v1_chr17_+_34742803_34742908	0.163304	GGCUCAG	NM_001163379|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AB005623|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AK086281|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm9_v1_chr5_+_134575561_134575653	0.156694	GGCUCAG	AJ296173|Gatsl2|80909|GATS protein-like 2	AK039122|Gatsl2|80909|GATS protein-like 2	BC094613|Gatsl2|80909|GATS protein-like 2	NM_030719|Gatsl2|80909|GATS protein-like 2	AK052217|Gatsl2|80909|GATS protein-like 2
mm9_v1_chr9_+_43552516_43552726	0.153855	GGCUCAG	BC060694|Pvrl1|58235|poliovirus receptor-related 1	NM_021424|Pvrl1|58235|poliovirus receptor-related 1	AF297665|Pvrl1|58235|poliovirus receptor-related 1	AF239762|Pvrl1|58235|poliovirus receptor-related 1	AF270977|Pvrl1|58235|poliovirus receptor-related 1
mm9_v1_chr17_-_56279684_56279770	0.151479	GGCUCAG	AK139358|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	AK143229|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	NM_001130456|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm9_v1_chr11_-_72363730_72363802	0.145114	GGCUCAG	BC150778|Spns3|77577|spinster homolog 3 (Drosophila)	AK156781|Spns3|77577|spinster homolog 3 (Drosophila)	AK020683|Spns3|77577|spinster homolog 3 (Drosophila)	NM_029932|Spns3|77577|spinster homolog 3 (Drosophila)	AK041376|Spns3|77577|spinster homolog 3 (Drosophila)
mm9_v1_chr11_-_33893151_33893192	0.144114	GGCUCAG	AK048178|Kcnip1|70357|Kv channel-interacting protein 1	AK081845|Kcnip1|70357|Kv channel-interacting protein 1	DQ148494|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190886|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr1_-_134287712_134287857	0.134069	GGCUCAG	AK172957|Tmcc2|68875|transmembrane and coiled-coil domains 2	BC052035|Tmcc2|68875|transmembrane and coiled-coil domains 2	NM_178874|Tmcc2|68875|transmembrane and coiled-coil domains 2
mm9_v1_chr13_+_23646900_23646904	0.132397	GGCUCAG	AK155411|Hist1h1d|14957|histone cluster 1, H1d	NM_145713|Hist1h1d|14957|histone cluster 1, H1d	AK054269|Hist1h1d|14957|histone cluster 1, H1d	BC117045|Hist1h1d|14957|histone cluster 1, H1d	BC119173|Hist1h1d|14957|histone cluster 1, H1d
mm9_v1_chr7_+_13563196_13563254	0.13176	GGCUCAG	AK041761|Zfp446|269870|zinc finger protein 446	BC117850|Zfp446|269870|zinc finger protein 446	BC117851|Zfp446|269870|zinc finger protein 446	NM_001168561|Zfp446|269870|zinc finger protein 446	NM_001168562|Zfp446|269870|zinc finger protein 446	NM_175558|Zfp446|269870|zinc finger protein 446	AK044666|Zfp446|269870|zinc finger protein 446	BC048909|Zfp446|269870|zinc finger protein 446
mm9_v1_chr8_-_87211726_87211763	0.13145	GGCUCAG	BC048157|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	AK012935|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC052706|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	BC054800|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	NM_025788|Nacc1|66830|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
mm9_v1_chr18_+_44540137_44540241	0.130659	GGCUCAG	AK153105|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_027490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK008609|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK017809|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK166560|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK010490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK152160|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153264|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153310|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)
mm9_v1_chr15_-_81688686_81688755	0.126545	GGCUCAG	BC094031|Tob2|57259|transducer of ERBB2, 2	BC021869|Tob2|57259|transducer of ERBB2, 2	AK049766|Tob2|57259|transducer of ERBB2, 2	AK080817|Tob2|57259|transducer of ERBB2, 2	AK143542|Tob2|57259|transducer of ERBB2, 2	AK037631|Tob2|57259|transducer of ERBB2, 2	AK044623|Tob2|57259|transducer of ERBB2, 2	NM_020507|Tob2|57259|transducer of ERBB2, 2
mm9_v1_chr10_-_119638448_119638648	0.122061	GGCUCAG	AJ440757|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120829|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120831|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC144835|Irak3|73914|interleukin-1 receptor-associated kinase 3	AF461763|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK029057|Irak3|73914|interleukin-1 receptor-associated kinase 3	NM_028679|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK049210|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK014783|Irak3|73914|interleukin-1 receptor-associated kinase 3
mm9_v1_chr2_-_35959513_35959579	0.120009	GGCUCAG	BC065077|Lhx6|16874|LIM homeobox protein 6	AB031039|Lhx6|16874|LIM homeobox protein 6	AB031040|Lhx6|16874|LIM homeobox protein 6	NM_001083126|Lhx6|16874|LIM homeobox protein 6	NM_001083127|Lhx6|16874|LIM homeobox protein 6
mm9_v1_chr1_+_36364557_36364660	0.107824	GGCUCAG	NM_001172205|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	NM_001172206|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	NM_145996|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK029237|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK085015|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK149839|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156376|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156622|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK156934|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK157607|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK150170|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	AK155555|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)	BC027152|Arid5a|214855|AT rich interactive domain 5A (MRF1-like)
mm9_v1_chr4_-_126210701_126210715	0.107433	GGCUCAG	NM_153177|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4	AK030018|Eif2c4|76850|eukaryotic translation initiation factor 2C, 4
mm9_v1_chr1_+_135142673_135142702	0.10525	GGCUCAG	NM_001160268|Plekha6|240753|pleckstrin homology domain containing, family A member 6	NM_182930|Plekha6|240753|pleckstrin homology domain containing, family A member 6	BC054547|Plekha6|240753|pleckstrin homology domain containing, family A member 6	AK173074|Plekha6|240753|pleckstrin homology domain containing, family A member 6
mm9_v1_chr4_+_106233632_106233688	0.1046	GGCUCAG	AK129036|Dhcr24|74754|24-dehydrocholesterol reductase	NM_053272|Dhcr24|74754|24-dehydrocholesterol reductase	AK083737|Dhcr24|74754|24-dehydrocholesterol reductase
mm9_v1_chr11_+_74644411_74644428	0.104395	GGCUCAG	NM_010813|Mnt|17428|max binding protein	U77356|Mnt|17428|max binding protein
mm9_v1_chr11_-_71949346_71949391	0.0995847	GGCUCAG	AK147444|Pitpnm3|327958|PITPNM family member 3	NM_001024927|Pitpnm3|327958|PITPNM family member 3	NM_001081641|Pitpnm3|327958|PITPNM family member 3
mm9_v1_chr13_-_3892788_3892823	0.0987009	GGCUCAG	AJ010045|Net1|56349|neuroepithelial cell transforming gene 1	AK020636|Net1|56349|neuroepithelial cell transforming gene 1	AK088632|Net1|56349|neuroepithelial cell transforming gene 1	AK139921|Net1|56349|neuroepithelial cell transforming gene 1	BC004699|Net1|56349|neuroepithelial cell transforming gene 1	AK082128|Net1|56349|neuroepithelial cell transforming gene 1	NM_001047159|Net1|56349|neuroepithelial cell transforming gene 1
mm9_v1_chrX_-_98615096_98615252	0.0960687	GGCUCAG	BC042699|Zmym3|56364|zinc finger, MYM-type 3	BC050131|Zmym3|56364|zinc finger, MYM-type 3	AK033470|Zmym3|56364|zinc finger, MYM-type 3	BC108366|Zmym3|56364|zinc finger, MYM-type 3	NM_001177985|Zmym3|56364|zinc finger, MYM-type 3	NM_001177986|Zmym3|56364|zinc finger, MYM-type 3
mm9_v1_chr4_-_33010429_33010479	0.0876127	GGCUCAG	BC065177|Ankrd6|140577|ankyrin repeat domain 6	NM_001012450|Ankrd6|140577|ankyrin repeat domain 6	NM_080471|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr15_+_81494364_81494367	0.0858039	GGCUCAG	AK132012|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK156236|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	NM_145993|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)	AK036510|L3mbtl2|214669|l(3)mbt-like 2 (Drosophila)
mm9_v1_chr5_-_115421045_115421102	0.0850682	GGCUCAG	M57966|Hnf1a|21405|HNF1 homeobox A	BC080698|Hnf1a|21405|HNF1 homeobox A	NM_009327|Hnf1a|21405|HNF1 homeobox A	AK144051|Hnf1a|21405|HNF1 homeobox A	BC013454|Hnf1a|21405|HNF1 homeobox A
mm9_v1_chr10_-_61802889_61803289	0.0837586	GGCUCAG	AK167468|Hk1|15275|hexokinase 1	AK143630|Hk1|15275|hexokinase 1	NM_001146100|Hk1|15275|hexokinase 1	BC072628|Hk1|15275|hexokinase 1
mm9_v1_chr3_-_78949796_78949796	0.0832057	GGCUCAG	BC067056|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2	NM_001099624|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr1_-_74331210_74331311	0.079892	GGCUCAG	AK151820|Aamp|227290|angio-associated migratory protein	AK167621|Aamp|227290|angio-associated migratory protein	AK162750|Aamp|227290|angio-associated migratory protein	AK146470|Aamp|227290|angio-associated migratory protein	NM_001190444|Aamp|227290|angio-associated migratory protein	NM_146110|Aamp|227290|angio-associated migratory protein
mm9_v1_chr7_-_105326687_105326735	0.0703853	GGCUCAG	AK164293|Capn5|12337|calpain 5	NM_007602|Capn5|12337|calpain 5	U85020|Capn5|12337|calpain 5	Y10656|Capn5|12337|calpain 5	AK170034|Capn5|12337|calpain 5
mm9_v1_chr17_-_82137708_82137731	0.062608	GGCUCAG	AF004666|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_001112798|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	NM_011406|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	U70033|Slc8a1|20541|solute carrier family 8 (sodium/calcium exchanger), member 1	AK084813|D830013E24Rik|319510|RIKEN cDNA D830013E24 gene	AK085810|D830013E24Rik|319510|RIKEN cDNA D830013E24 gene
mm9_v1_chr7_+_51036423_51036448	0.0611695	GGCUCAG	NM_133712|Klk10|69540|kallikrein related-peptidase 10	AK009000|Klk10|69540|kallikrein related-peptidase 10	BC002100|Klk10|69540|kallikrein related-peptidase 10
mm9_v1_chr10_-_128133261_128133372	0.0532813	GGCUCAG	AK144551|Rab5b|19344|RAB5B, member RAS oncogene family	AK083034|Rab5b|19344|RAB5B, member RAS oncogene family	AK081251|Rab5b|19344|RAB5B, member RAS oncogene family	NM_177411|Rab5b|19344|RAB5B, member RAS oncogene family
mm9_v1_chr15_-_11925724_11925789	0.0443457	GGCUCAG	J03750|Sub1|20024|SUB1 homolog (S. cerevisiae)	BC010967|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK146335|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK154114|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK049260|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK132021|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK151734|Sub1|20024|SUB1 homolog (S. cerevisiae)	AK048371|Sub1|20024|SUB1 homolog (S. cerevisiae)	NM_011294|Sub1|20024|SUB1 homolog (S. cerevisiae)
mm9_v1_chr11_-_69211724_69211741	0.0335658	GGCUCAG	BC100316|Tmem88|67020|transmembrane protein 88	AK010789|Tmem88|67020|transmembrane protein 88	AK011240|Tmem88|67020|transmembrane protein 88	AK045149|Tmem88|67020|transmembrane protein 88	AK161789|Tmem88|67020|transmembrane protein 88	BC120912|Tmem88|67020|transmembrane protein 88	NM_025915|Tmem88|67020|transmembrane protein 88
mm9_v1_chr3_-_92289795_92289819	0.0218075	GGCUCAG	X91824|Sprr1a|20753|small proline-rich protein 1A	BC027534|Sprr1a|20753|small proline-rich protein 1A	NM_009264|Sprr1a|20753|small proline-rich protein 1A	AK144782|Sprr1a|20753|small proline-rich protein 1A
mm9_v1_chr17_+_45643768_45643817	0.0213834	GGCUCAG	AK146958|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	NM_198608|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113172|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC113779|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	AK167771|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)	BC079844|Aars2|224805|alanyl-tRNA synthetase 2, mitochondrial (putative)
mm9_v1_chr15_-_101573522_101573539	0.0180705	GGCUCAG	BC125346|Krt71|56735|keratin 71	BC125348|Krt71|56735|keratin 71	AB033744|Krt71|56735|keratin 71	AB100413|Krt71|56735|keratin 71	AY033497|Krt71|56735|keratin 71	NM_019956|Krt71|56735|keratin 71	AK003610|Krt71|56735|keratin 71	AK003704|Krt71|56735|keratin 71
mm9_v1_chr7_-_123138599_123138599	0.0160235	GGCUCAG	NM_011445|Sox6|20679|SRY-box containing gene 6	U32614|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr1_+_34636537_34636571	0.0154305	GGCUCAG	NM_213727|Fam123c|211383|family with sequence similarity 123, member C	BC070435|Fam123c|211383|family with sequence similarity 123, member C
mm9_v1_chr11_-_49526211_49526234	0.011064	GGCUCAG	BC062950|Cnot6|104625|CCR4-NOT transcription complex, subunit 6	NM_212484|Cnot6|104625|CCR4-NOT transcription complex, subunit 6
mm9_v1_chr9_+_21229348_21229458	0.00572911	GGCUCAG	AK172231|Dnm2|13430|dynamin 2	AK170574|Dnm2|13430|dynamin 2	AK005012|Dnm2|13430|dynamin 2	AK157844|Dnm2|13430|dynamin 2	AK150046|Dnm2|13430|dynamin 2	AK171566|Dnm2|13430|dynamin 2	NM_001039520|Dnm2|13430|dynamin 2	AK171049|Dnm2|13430|dynamin 2	L31398|Dnm2|13430|dynamin 2
mm9_v1_chr1_-_59293936_59294089	0.00556564	GGCUCAG	AK029858|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_001159948|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC046828|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC031479|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	AB053307|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_028717|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_146109|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)
