mm9_v1_chr8_-_125075222_125075228	23.8403	HIF1A.p2	NM_001037298|Fam38a|234839|family with sequence similarity 38, member A
mm9_v1_chr10_+_43198945_43198945	21.8915	HIF1A.p2	BC060240|Bend3|331623|BEN domain containing 3	NM_199028|Bend3|331623|BEN domain containing 3
mm9_v1_chr11_-_115971327_115971329	19.8211	HIF1A.p2	BC145059|Trim47|217333|tripartite motif-containing 47	BC132148|Trim47|217333|tripartite motif-containing 47	BC137953|Trim47|217333|tripartite motif-containing 47	NM_172570|Trim47|217333|tripartite motif-containing 47
mm9_v1_chr8_+_49195311_49195555	14.7088	HIF1A.p2	NM_178788|Dctd|320685|dCMP deaminase	AK031645|Dctd|320685|dCMP deaminase	AK077663|Dctd|320685|dCMP deaminase	NM_001161515|Dctd|320685|dCMP deaminase	AK171894|Dctd|320685|dCMP deaminase	BC031719|Dctd|320685|dCMP deaminase	AK039066|Dctd|320685|dCMP deaminase
mm9_v1_chr2_-_13977688_13977761	14.5718	HIF1A.p2	BC138116|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	BC141017|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
mm9_v1_chr9_-_58160063_58160199	14.5657	HIF1A.p2	BC003973|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr19_+_7049425_7049555	13.5199	HIF1A.p2	AK141152|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	X97490|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC082545|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	NM_008889|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr7_+_54101157_54101223	13.4679	HIF1A.p2	NM_010699|Ldha|16828|lactate dehydrogenase A	AK168920|Ldha|16828|lactate dehydrogenase A	AK089929|Ldha|16828|lactate dehydrogenase A	AK146121|Ldha|16828|lactate dehydrogenase A	AK150156|Ldha|16828|lactate dehydrogenase A	AK167789|Ldha|16828|lactate dehydrogenase A	AK167944|Ldha|16828|lactate dehydrogenase A	AK168346|Ldha|16828|lactate dehydrogenase A	AK170386|Ldha|16828|lactate dehydrogenase A	AK171373|Ldha|16828|lactate dehydrogenase A	AK170708|Ldha|16828|lactate dehydrogenase A	AK149919|Ldha|16828|lactate dehydrogenase A	BC094428|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr12_+_33505307_33505342	13.3916	HIF1A.p2	AF234625|Nampt|59027|nicotinamide phosphoribosyltransferase	AK166270|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr19_+_7049639_7049662	12.923	HIF1A.p2	BC125654|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC125650|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr12_+_33505364_33505391	12.7765	HIF1A.p2	AY679720|Nampt|59027|nicotinamide phosphoribosyltransferase	AK086415|Nampt|59027|nicotinamide phosphoribosyltransferase	AK153926|Nampt|59027|nicotinamide phosphoribosyltransferase	BC004059|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr9_+_107490100_107490219	12.3042	HIF1A.p2	BC023486|Ifrd2|15983|interferon-related developmental regulator 2	BC037434|Ifrd2|15983|interferon-related developmental regulator 2	AY298860|Ifrd2|15983|interferon-related developmental regulator 2
mm9_v1_chr4_-_118966945_118967127	12.2342	HIF1A.p2	X57621|Ybx1|22608|Y box protein 1	M62867|Ybx1|22608|Y box protein 1	U33196|Ybx1|22608|Y box protein 1	BC029747|Ybx1|22608|Y box protein 1	BC013620|Ybx1|22608|Y box protein 1	M60419|Ybx1|22608|Y box protein 1	BC061634|Ybx1|22608|Y box protein 1	BC031472|Ybx1|22608|Y box protein 1	BC049977|Ybx1|22608|Y box protein 1	BC013450|Ybx1|22608|Y box protein 1	AK011890|Ybx1|22608|Y box protein 1	AK150821|Ybx1|22608|Y box protein 1	NM_011732|Ybx1|22608|Y box protein 1
mm9_v1_chr14_-_45938164_45938183	11.9165	HIF1A.p2	CT010195|Ero1l|50527|ERO1-like (S. cerevisiae)	CT010259|Ero1l|50527|ERO1-like (S. cerevisiae)
mm9_v1_chr17_+_35137995_35138088	11.8347	HIF1A.p2	AK157814|Vars|22321|valyl-tRNA synthetase	AK012123|Vars|22321|valyl-tRNA synthetase	AK154823|Vars|22321|valyl-tRNA synthetase	BC053703|Vars|22321|valyl-tRNA synthetase	AF087680|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr10_-_68815606_68815685	11.7238	HIF1A.p2	BC024396|Cdk1|12534|cyclin-dependent kinase 1	AK168054|Cdk1|12534|cyclin-dependent kinase 1	AK030231|Cdk1|12534|cyclin-dependent kinase 1	NM_007659|Cdk1|12534|cyclin-dependent kinase 1	AK135516|Cdk1|12534|cyclin-dependent kinase 1	U58633|Cdk1|12534|cyclin-dependent kinase 1	AK051859|Cdk1|12534|cyclin-dependent kinase 1
mm9_v1_chr7_+_54101226_54101257	11.1633	HIF1A.p2	BC066858|Ldha|16828|lactate dehydrogenase A	BC094019|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr1_-_55144637_55144685	11.0805	HIF1A.p2	X55023|Hspd1|15510|heat shock protein 1 (chaperonin)	BC016400|Hspd1|15510|heat shock protein 1 (chaperonin)	AK143882|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr2_-_169956719_169956719	10.9222	HIF1A.p2	AK156475|Zfp217|228913|zinc finger protein 217	NM_001033299|Zfp217|228913|zinc finger protein 217
mm9_v1_chr11_+_3190334_3190510	10.6353	HIF1A.p2	AK166189|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC043035|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	AB029397|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	NM_019574|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr1_-_55144687_55144775	10.5712	HIF1A.p2	AK088844|Hspd1|15510|heat shock protein 1 (chaperonin)	AK146831|Hspd1|15510|heat shock protein 1 (chaperonin)	NM_010477|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr2_+_27741864_27742035	10.569	HIF1A.p2	NM_015734|Col5a1|12831|collagen, type V, alpha 1
mm9_v1_chr1_+_55145132_55145232	10.5225	HIF1A.p2	AK088121|Hspe1|15528|heat shock protein 1 (chaperonin 10)	U09659|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC099385|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK151935|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK133876|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC024385|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr9_+_107489981_107490091	10.4907	HIF1A.p2	AK166130|Ifrd2|15983|interferon-related developmental regulator 2	AK007687|Ifrd2|15983|interferon-related developmental regulator 2	NM_025903|Ifrd2|15983|interferon-related developmental regulator 2	AK156625|Ifrd2|15983|interferon-related developmental regulator 2	AK165967|Ifrd2|15983|interferon-related developmental regulator 2	AK149496|Ifrd2|15983|interferon-related developmental regulator 2	AK166258|Ifrd2|15983|interferon-related developmental regulator 2
mm9_v1_chr2_-_179777080_179777173	10.3731	HIF1A.p2	BC014752|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	BC008222|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AF019662|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	NM_011969|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK088615|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK165563|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK146765|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK168234|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7
mm9_v1_chr14_-_31832274_31832280	10.3563	HIF1A.p2	NM_153547|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167094|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chr1_-_75176703_75176874	10.2228	HIF1A.p2	AF045562|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	BC006634|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	NM_023732|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK040323|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK164003|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr8_-_72498125_72498184	10.0347	HIF1A.p2	BC038221|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr8_+_34842304_34842440	9.99551	HIF1A.p2	AK158783|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	NM_001167921|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK150415|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK153370|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr2_-_13977502_13977510	9.60941	HIF1A.p2	AK010119|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	AK076818|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
mm9_v1_chr11_-_102680467_102680523	9.56806	HIF1A.p2	BC050840|Gjc1|14615|gap junction protein, gamma 1	NM_001159382|Gjc1|14615|gap junction protein, gamma 1	BC023153|Gjc1|14615|gap junction protein, gamma 1	AY390397|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr16_+_32608981_32609106	9.44765	HIF1A.p2	NM_011638|Tfrc|22042|transferrin receptor	AK048228|Tfrc|22042|transferrin receptor	AK088961|Tfrc|22042|transferrin receptor	BC054522|Tfrc|22042|transferrin receptor
mm9_v1_chr10_-_119913990_119913990	9.3737	HIF1A.p2	NM_010441|Hmga2|15364|high mobility group AT-hook 2
mm9_v1_chr4_-_131901576_131901664	9.31776	HIF1A.p2	BC019807|Rcc1|100088|regulator of chromosome condensation 1	AK155225|Rcc1|100088|regulator of chromosome condensation 1	AK150610|Rcc1|100088|regulator of chromosome condensation 1	AK153193|Rcc1|100088|regulator of chromosome condensation 1	AK153994|Rcc1|100088|regulator of chromosome condensation 1	AK150153|Rcc1|100088|regulator of chromosome condensation 1	BC057645|Rcc1|100088|regulator of chromosome condensation 1	AK076089|Rcc1|100088|regulator of chromosome condensation 1	NM_001197082|Rcc1|100088|regulator of chromosome condensation 1	NM_133878|Rcc1|100088|regulator of chromosome condensation 1
mm9_v1_chr16_-_22163264_22163371	9.15598	HIF1A.p2	NM_183029|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr14_-_45938187_45938229	8.99774	HIF1A.p2	BC025102|Ero1l|50527|ERO1-like (S. cerevisiae)	NM_015774|Ero1l|50527|ERO1-like (S. cerevisiae)	AK159217|Ero1l|50527|ERO1-like (S. cerevisiae)
mm9_v1_chr3_+_121948541_121948621	8.95545	HIF1A.p2	BC132404|Gclm|14630|glutamate-cysteine ligase, modifier subunit	BC138783|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr1_-_75176965_75176984	8.94516	HIF1A.p2	AK151165|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr7_-_59117613_59117656	8.83752	HIF1A.p2	NM_001115087|Fancf|100040608|Fanconi anemia, complementation group F
mm9_v1_chr14_-_31832165_31832254	8.82822	HIF1A.p2	BC037996|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY181025|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AY185498|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK087757|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK167183|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	BC018560|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)	AK077523|Gnl3|30877|guanine nucleotide binding protein-like 3 (nucleolar)
mm9_v1_chr17_-_35137799_35137902	8.74846	HIF1A.p2	AK088284|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr17_-_26232411_26232456	8.70616	HIF1A.p2	AF153451|Nme4|56520|non-metastatic cells 4, protein expressed in	NM_019731|Nme4|56520|non-metastatic cells 4, protein expressed in	AK011573|Nme4|56520|non-metastatic cells 4, protein expressed in	AK017724|Nme4|56520|non-metastatic cells 4, protein expressed in	AF288690|Nme4|56520|non-metastatic cells 4, protein expressed in	BC027277|Nme4|56520|non-metastatic cells 4, protein expressed in	AK012805|Nme4|56520|non-metastatic cells 4, protein expressed in
mm9_v1_chr1_-_33814537_33814587	8.56658	HIF1A.p2	AK083600|Bag2|213539|BCL2-associated athanogene 2	AK051352|Bag2|213539|BCL2-associated athanogene 2	BC028944|Bag2|213539|BCL2-associated athanogene 2	AK144720|Bag2|213539|BCL2-associated athanogene 2
mm9_v1_chr12_+_17551678_17551699	8.53775	HIF1A.p2	NM_013614|Odc1|18263|ornithine decarboxylase, structural 1
mm9_v1_chr14_-_45938236_45938274	8.5107	HIF1A.p2	AK142595|Ero1l|50527|ERO1-like (S. cerevisiae)
mm9_v1_chr5_+_129526383_129526424	8.48273	HIF1A.p2	L32751|Ran|19384|RAN, member RAS oncogene family	AF159256|Ran|19384|RAN, member RAS oncogene family	M79316|Ran|19384|RAN, member RAS oncogene family	AK217413|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr10_-_83996516_83996534	8.45487	HIF1A.p2	AK030708|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr2_-_73052484_73052503	8.33998	HIF1A.p2	AK013055|Ola1|67059|Obg-like ATPase 1	NM_025942|Ola1|67059|Obg-like ATPase 1	NM_030091|Ola1|67059|Obg-like ATPase 1
mm9_v1_chr19_+_47654060_47654223	8.32459	HIF1A.p2	AK122218|Slk|20874|STE20-like kinase (yeast)
mm9_v1_chr10_+_17443024_17443226	8.22104	HIF1A.p2	AK131664|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AK133791|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_010828|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	BC057126|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U86445|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	Y15163|Cited2|17684|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm9_v1_chr4_-_118966829_118966902	8.01486	HIF1A.p2	AK188049|Ybx1|22608|Y box protein 1	AF038994|Ybx1|22608|Y box protein 1
mm9_v1_chr4_+_107040634_107040642	7.92301	HIF1A.p2	BC021337|Tmem48|72787|transmembrane protein 48
mm9_v1_chr9_-_43047862_43047949	7.83012	HIF1A.p2	BC026022|Oaf|102644|OAF homolog (Drosophila)	BC034836|Oaf|102644|OAF homolog (Drosophila)	AK150279|Oaf|102644|OAF homolog (Drosophila)	BC025514|Oaf|102644|OAF homolog (Drosophila)	AK051349|Oaf|102644|OAF homolog (Drosophila)	NM_178644|Oaf|102644|OAF homolog (Drosophila)
mm9_v1_chr2_-_13977563_13977661	7.82985	HIF1A.p2	AK004461|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	AK085898|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	NM_001012396|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	NM_013935|Ptpla|30963|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
mm9_v1_chr7_-_112884943_112884950	7.72921	HIF1A.p2	AK165828|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK045361|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK170257|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)
mm9_v1_chr18_-_52689504_52689520	7.70181	HIF1A.p2	AK164634|Lox|16948|lysyl oxidase
mm9_v1_chr8_+_109417539_109417610	7.62172	HIF1A.p2	NM_011574|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	BC068113|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK144455|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK146263|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK150862|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK168470|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK173318|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)
mm9_v1_chr11_-_115971521_115971577	7.61507	HIF1A.p2	AK031572|Trim47|217333|tripartite motif-containing 47	BC100317|Trim47|217333|tripartite motif-containing 47
mm9_v1_chr17_+_46633703_46633755	7.60553	HIF1A.p2	BC082791|BC048355|381101|cDNA sequence BC048355	AK146723|BC048355|381101|cDNA sequence BC048355	NM_207161|BC048355|381101|cDNA sequence BC048355	BC048355|BC048355|381101|cDNA sequence BC048355	AK151589|BC048355|381101|cDNA sequence BC048355
mm9_v1_chr5_+_129526060_129526131	7.55105	HIF1A.p2	BC014829|Ran|19384|RAN, member RAS oncogene family	AK153197|Ran|19384|RAN, member RAS oncogene family	AK075900|Ran|19384|RAN, member RAS oncogene family	AK145272|Ran|19384|RAN, member RAS oncogene family	AK160647|Ran|19384|RAN, member RAS oncogene family	AK168183|Ran|19384|RAN, member RAS oncogene family	AK151341|Ran|19384|RAN, member RAS oncogene family	AK151937|Ran|19384|RAN, member RAS oncogene family	AK153411|Ran|19384|RAN, member RAS oncogene family	AK087974|Ran|19384|RAN, member RAS oncogene family	AK167040|Ran|19384|RAN, member RAS oncogene family	AK010672|Ran|19384|RAN, member RAS oncogene family	BC083356|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr1_-_145549758_145549813	7.54591	HIF1A.p2	BC031127|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_145991|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr14_-_32643594_32643685	7.51158	HIF1A.p2	BC051456|Ankrd28|105522|ankyrin repeat domain 28	BC094609|Ankrd28|105522|ankyrin repeat domain 28	NM_001024604|Ankrd28|105522|ankyrin repeat domain 28
mm9_v1_chr18_+_35713033_35713097	7.50035	HIF1A.p2	AK012754|Matr3|17184|matrin 3	AK041908|Matr3|17184|matrin 3	AK080350|Matr3|17184|matrin 3
mm9_v1_chr7_-_112885071_112885075	7.4256	HIF1A.p2	AK154858|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)
mm9_v1_chr19_+_36908807_36908893	7.42459	HIF1A.p2	AK047094|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AK163335|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm9_v1_chr7_-_112884969_112885029	7.38595	HIF1A.p2	AK172224|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK172189|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	BC046799|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK005138|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	NM_025897|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK013462|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	AK077786|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)	BC022923|Rrp8|101867|ribosomal RNA processing 8, methyltransferase, homolog (yeast)
mm9_v1_chr9_-_58160769_58160855	7.38114	HIF1A.p2	AF357006|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr8_-_123112974_123112989	7.37088	HIF1A.p2	BC082565|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)	NM_178856|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)	AK014776|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)	AK030758|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)
mm9_v1_chr17_-_23814415_23814446	7.21417	HIF1A.p2	AK160136|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_001161746|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_013749|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr1_-_75176926_75176956	7.17579	HIF1A.p2	AK004605|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK150853|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK152584|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK168642|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr10_-_83996632_83996824	6.9926	HIF1A.p2	NM_175451|Ckap4|216197|cytoskeleton-associated protein 4	BC138318|Ckap4|216197|cytoskeleton-associated protein 4	BC138320|Ckap4|216197|cytoskeleton-associated protein 4	AK132136|Ckap4|216197|cytoskeleton-associated protein 4
mm9_v1_chr11_+_68859125_68859285	6.91009	HIF1A.p2	NM_011496|Aurkb|20877|aurora kinase B	AK132006|Aurkb|20877|aurora kinase B	BC003261|Aurkb|20877|aurora kinase B	AK075951|Aurkb|20877|aurora kinase B	U69107|Aurkb|20877|aurora kinase B	AK191945|Aurkb|20877|aurora kinase B
mm9_v1_chr2_+_162880370_162880424	6.88965	HIF1A.p2	AK028497|Mybl2|17865|myeloblastosis oncogene-like 2	NM_008652|Mybl2|17865|myeloblastosis oncogene-like 2	X70472|Mybl2|17865|myeloblastosis oncogene-like 2	BC050842|Mybl2|17865|myeloblastosis oncogene-like 2
mm9_v1_chrX_-_165111764_165111833	6.79432	HIF1A.p2	AK146208|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	BC010226|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	AK148898|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	AF117066|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	NM_010832|Msl3|17692|male-specific lethal 3 homolog (Drosophila)
mm9_v1_chr2_+_22751003_22751041	6.78224	HIF1A.p2	NM_019501|Pdss1|56075|prenyl (solanesyl) diphosphate synthase, subunit 1
mm9_v1_chr9_+_92437056_92437289	6.74459	HIF1A.p2	AK046364|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_001142916|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	NM_011961|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK033363|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK157207|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AK042433|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	BC021352|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	AF080572|Plod2|26432|procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mm9_v1_chr5_-_23289370_23289531	6.73192	HIF1A.p2	BC138533|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	BC145316|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK173290|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK160849|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_178403|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	BC008544|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK142271|Pus7|78697|pseudouridylate synthase 7 homolog (S. cerevisiae)
mm9_v1_chr15_+_9001154_9001214	6.72904	HIF1A.p2	BC115776|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr4_+_154937946_154937994	6.71678	HIF1A.p2	AK147917|Nadk|192185|NAD kinase
mm9_v1_chr8_+_34842810_34842810	6.70704	HIF1A.p2	NM_001167922|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr8_-_123112925_123112969	6.70369	HIF1A.p2	AK028375|Gins2|272551|GINS complex subunit 2 (Psf2 homolog)
mm9_v1_chr4_+_154937914_154937943	6.68024	HIF1A.p2	NM_001159637|Nadk|192185|NAD kinase	AK170608|Nadk|192185|NAD kinase	AK165510|Nadk|192185|NAD kinase	AK170095|Nadk|192185|NAD kinase	AK170960|Nadk|192185|NAD kinase
mm9_v1_chr12_+_33505175_33505279	6.66056	HIF1A.p2	BC018358|Nampt|59027|nicotinamide phosphoribosyltransferase	NM_021524|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr9_-_88417710_88417730	6.65559	HIF1A.p2	BC032970|Snhg5|72655|small nucleolar RNA host gene 5	AK012825|Snhg5|72655|small nucleolar RNA host gene 5
mm9_v1_chr5_-_145726643_145726766	6.64813	HIF1A.p2	AK154491|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1	NM_001038627|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1	NM_029438|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1	BC029097|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1
mm9_v1_chr5_+_129525943_129526053	6.63733	HIF1A.p2	AK002436|Ran|19384|RAN, member RAS oncogene family	NM_009391|Ran|19384|RAN, member RAS oncogene family	S83456|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr17_-_23814399_23814413	6.63276	HIF1A.p2	BC025860|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AF156164|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005382|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005530|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr6_-_6167034_6167063	6.58335	HIF1A.p2	AK002829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK012670|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr6_-_6167113_6167172	6.57598	HIF1A.p2	AK151180|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK152237|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AF164632|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK150496|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_001177572|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_015829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr16_+_44724394_44724433	6.57252	HIF1A.p2	NM_145972|BC027231|212547|cDNA sequence BC027231	BC027231|BC027231|212547|cDNA sequence BC027231	AK144612|BC027231|212547|cDNA sequence BC027231
mm9_v1_chr12_-_77470450_77470546	6.5722	HIF1A.p2	NM_001172104|Zbtb25|109929|zinc finger and BTB domain containing 25	AK137486|Zbtb25|109929|zinc finger and BTB domain containing 25	NM_028356|Zbtb25|109929|zinc finger and BTB domain containing 25
mm9_v1_chr6_-_6167086_6167104	6.54698	HIF1A.p2	AK029020|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr1_-_155179844_155179930	6.48673	HIF1A.p2	J02930|Lamc1|226519|laminin, gamma 1	AK144233|Lamc1|226519|laminin, gamma 1	J03484|Lamc1|226519|laminin, gamma 1	NM_010683|Lamc1|226519|laminin, gamma 1
mm9_v1_chr18_-_52689185_52689268	6.46193	HIF1A.p2	AK166279|Lox|16948|lysyl oxidase	AK159682|Lox|16948|lysyl oxidase	AK159368|Lox|16948|lysyl oxidase	M65142|Lox|16948|lysyl oxidase	AK159796|Lox|16948|lysyl oxidase	AK160096|Lox|16948|lysyl oxidase	AK159241|Lox|16948|lysyl oxidase
mm9_v1_chr2_-_144096582_144096606	6.42595	HIF1A.p2	BC002242|Snx5|69178|sorting nexin 5
mm9_v1_chr11_-_57981970_57982020	6.41978	HIF1A.p2	AK049216|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC137802|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144921|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144922|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK143536|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK131137|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr2_+_22751081_22751226	6.39445	HIF1A.p2	AK012307|Pdss1|56075|prenyl (solanesyl) diphosphate synthase, subunit 1	AB210841|Pdss1|56075|prenyl (solanesyl) diphosphate synthase, subunit 1	BC026820|Pdss1|56075|prenyl (solanesyl) diphosphate synthase, subunit 1	BC107274|Pdss1|56075|prenyl (solanesyl) diphosphate synthase, subunit 1	BC107273|Pdss1|56075|prenyl (solanesyl) diphosphate synthase, subunit 1
mm9_v1_chr1_-_33814590_33814594	6.38855	HIF1A.p2	BC016230|Bag2|213539|BCL2-associated athanogene 2	NM_145392|Bag2|213539|BCL2-associated athanogene 2
mm9_v1_chr4_+_11118500_11118500	6.37042	HIF1A.p2	NM_001037134|Ccne2|12448|cyclin E2
mm9_v1_chr6_+_108778985_108779072	6.35457	HIF1A.p2	AK037889|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1
mm9_v1_chr2_-_144096164_144096250	6.33356	HIF1A.p2	AK159904|Snx5|69178|sorting nexin 5	AK167362|Snx5|69178|sorting nexin 5
mm9_v1_chr11_-_84326869_84327030	6.30535	HIF1A.p2	AY306199|Aatf|56321|apoptosis antagonizing transcription factor	BC025080|Aatf|56321|apoptosis antagonizing transcription factor	AK141334|Aatf|56321|apoptosis antagonizing transcription factor	AF222801|Aatf|56321|apoptosis antagonizing transcription factor	NM_019816|Aatf|56321|apoptosis antagonizing transcription factor	AK077789|Aatf|56321|apoptosis antagonizing transcription factor
mm9_v1_chr17_-_56766191_56766343	6.24539	HIF1A.p2	AY190302|Lonp1|74142|lon peptidase 1, mitochondrial	BC057365|Lonp1|74142|lon peptidase 1, mitochondrial	BC058735|Lonp1|74142|lon peptidase 1, mitochondrial	AK157474|Lonp1|74142|lon peptidase 1, mitochondrial	AK004820|Lonp1|74142|lon peptidase 1, mitochondrial	AK131910|Lonp1|74142|lon peptidase 1, mitochondrial	AK159302|Lonp1|74142|lon peptidase 1, mitochondrial	AK160071|Lonp1|74142|lon peptidase 1, mitochondrial	AK160076|Lonp1|74142|lon peptidase 1, mitochondrial	AK161983|Lonp1|74142|lon peptidase 1, mitochondrial	NM_028782|Lonp1|74142|lon peptidase 1, mitochondrial
mm9_v1_chr17_-_50329593_50329893	6.24076	HIF1A.p2	AK087803|Rftn1|76438|raftlin lipid raft linker 1	AK152130|Rftn1|76438|raftlin lipid raft linker 1	AK153288|Rftn1|76438|raftlin lipid raft linker 1	AK172884|Rftn1|76438|raftlin lipid raft linker 1	AK155870|Rftn1|76438|raftlin lipid raft linker 1	AK170913|Rftn1|76438|raftlin lipid raft linker 1	BC052074|Rftn1|76438|raftlin lipid raft linker 1	NM_181397|Rftn1|76438|raftlin lipid raft linker 1
mm9_v1_chr5_+_123526279_123526440	6.20929	HIF1A.p2	NM_001039723|Tmem120b|330189|transmembrane protein 120B	AK132283|Tmem120b|330189|transmembrane protein 120B	AK158123|Tmem120b|330189|transmembrane protein 120B	BC022593|Tmem120b|330189|transmembrane protein 120B	BC115785|Tmem120b|330189|transmembrane protein 120B	BC118014|Tmem120b|330189|transmembrane protein 120B	AK172110|Tmem120b|330189|transmembrane protein 120B
mm9_v1_chr11_+_97177029_97177191	6.2077	HIF1A.p2	NM_025927|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011163|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011605|Mrpl45|67036|mitochondrial ribosomal protein L45	AK081922|Mrpl45|67036|mitochondrial ribosomal protein L45	AK157771|Mrpl45|67036|mitochondrial ribosomal protein L45	BC020130|Mrpl45|67036|mitochondrial ribosomal protein L45	AK198473|Mrpl45|67036|mitochondrial ribosomal protein L45
mm9_v1_chr6_-_88848650_88848773	6.20029	HIF1A.p2	AF004105|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK129039|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK077801|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088378|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	BC055318|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK145176|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK088156|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146187|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	D86725|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK146375|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	AK037751|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	NM_008564|Mcm2|17216|minichromosome maintenance deficient 2 mitotin (S. cerevisiae)
mm9_v1_chr5_-_111082387_111082407	6.19971	HIF1A.p2	BC024616|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK146006|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK088355|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK052601|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	NM_153570|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK090024|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)
mm9_v1_chr1_-_145549903_145549945	6.18945	HIF1A.p2	BC027756|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK080861|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr14_+_70009282_70009284	6.14841	HIF1A.p2	NM_033325|Loxl2|94352|lysyl oxidase-like 2	AK045019|Loxl2|94352|lysyl oxidase-like 2
mm9_v1_chrX_+_93291377_93291457	6.13056	HIF1A.p2	AK133819|Msn|17698|moesin	AK145746|Msn|17698|moesin	AK150869|Msn|17698|moesin	AK153210|Msn|17698|moesin	NM_010833|Msn|17698|moesin	AK031171|Msn|17698|moesin	S47577|Msn|17698|moesin	BC047366|Msn|17698|moesin	AK157701|Msn|17698|moesin	AK087001|Msn|17698|moesin	AK088336|Msn|17698|moesin
mm9_v1_chr19_+_47654508_47654642	6.1078	HIF1A.p2	AF039574|Slk|20874|STE20-like kinase (yeast)	NM_001164639|Slk|20874|STE20-like kinase (yeast)	NM_009289|Slk|20874|STE20-like kinase (yeast)	BC131674|Slk|20874|STE20-like kinase (yeast)	BC131675|Slk|20874|STE20-like kinase (yeast)	AF112855|Slk|20874|STE20-like kinase (yeast)	AK029491|Slk|20874|STE20-like kinase (yeast)
mm9_v1_chr13_-_99660903_99660996	6.10733	HIF1A.p2	BC055372|Tnpo1|238799|transportin 1	AK167049|Tnpo1|238799|transportin 1	AK045132|Tnpo1|238799|transportin 1	NM_001048267|Tnpo1|238799|transportin 1
mm9_v1_chr8_+_67471046_67471202	6.05542	HIF1A.p2	AK013998|Tmem192|73067|transmembrane protein 192	NM_001163747|Tmem192|73067|transmembrane protein 192	NM_028427|Tmem192|73067|transmembrane protein 192	AK168146|Tmem192|73067|transmembrane protein 192	AK046181|Tmem192|73067|transmembrane protein 192	AK132619|Tmem192|73067|transmembrane protein 192	BC020157|Tmem192|73067|transmembrane protein 192
mm9_v1_chr8_+_86521498_86521570	6.0239	HIF1A.p2	NM_001081415|Samd1|666704|sterile alpha motif domain containing 1
mm9_v1_chr5_+_64484146_64484264	6.00859	HIF1A.p2	BC052762|Pgm1|66681|phosphoglucomutase 1	NM_025700|Pgm1|66681|phosphoglucomutase 1	BC030869|Pgm1|66681|phosphoglucomutase 1	AK014332|Pgm1|66681|phosphoglucomutase 1
mm9_v1_chr4_+_122960059_122960153	5.97646	HIF1A.p2	BC058263|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	BC056432|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	NM_130881|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4
mm9_v1_chr10_+_68675404_68675423	5.9546	HIF1A.p2	AK034826|Rhobtb1|69288|Rho-related BTB domain containing 1	NM_001081347|Rhobtb1|69288|Rho-related BTB domain containing 1	BC099973|Rhobtb1|69288|Rho-related BTB domain containing 1
mm9_v1_chr17_+_35035898_35035925	5.92264	HIF1A.p2	AK154246|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	AB077210|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	NM_145830|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2
mm9_v1_chr8_+_131209787_131209829	5.78427	HIF1A.p2	AK088729|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr5_+_34000745_34000795	5.77351	HIF1A.p2	AK076282|Tacc3|21335|transforming, acidic coiled-coil containing protein 3	NM_001040435|Tacc3|21335|transforming, acidic coiled-coil containing protein 3
mm9_v1_chr14_-_62058627_62058783	5.75736	HIF1A.p2	AF020772|Kpna3|16648|karyopherin (importin) alpha 3	AK011559|Kpna3|16648|karyopherin (importin) alpha 3	AK049373|Kpna3|16648|karyopherin (importin) alpha 3	BC026885|Kpna3|16648|karyopherin (importin) alpha 3	AK161664|Kpna3|16648|karyopherin (importin) alpha 3	NM_008466|Kpna3|16648|karyopherin (importin) alpha 3
mm9_v1_chr15_-_99705812_99705887	5.73822	HIF1A.p2	BC031490|Lima1|65970|LIM domain and actin binding 1	AK028311|Lima1|65970|LIM domain and actin binding 1	AK049350|Lima1|65970|LIM domain and actin binding 1	AF307845|Lima1|65970|LIM domain and actin binding 1	AK078959|Lima1|65970|LIM domain and actin binding 1	NM_001113545|Lima1|65970|LIM domain and actin binding 1
mm9_v1_chr5_+_129526311_129526363	5.7299	HIF1A.p2	AK012268|Ran|19384|RAN, member RAS oncogene family	AK010569|Ran|19384|RAN, member RAS oncogene family
mm9_v1_chr8_-_87956665_87956752	5.72267	HIF1A.p2	BC050139|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK169408|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC027027|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK017512|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK014959|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	NM_025722|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr6_-_131243197_131243269	5.70241	HIF1A.p2	BC027505|Magohb|66441|mago-nashi homolog B (Drosophila)	AK007769|Magohb|66441|mago-nashi homolog B (Drosophila)	AK013310|Magohb|66441|mago-nashi homolog B (Drosophila)	AK006303|Magohb|66441|mago-nashi homolog B (Drosophila)	AK008200|Magohb|66441|mago-nashi homolog B (Drosophila)	NM_025564|Magohb|66441|mago-nashi homolog B (Drosophila)
mm9_v1_chr13_+_109106530_109106573	5.656	HIF1A.p2	NM_178683|Depdc1b|218581|DEP domain containing 1B	AK077676|Depdc1b|218581|DEP domain containing 1B	BC152330|Depdc1b|218581|DEP domain containing 1B	BC152331|Depdc1b|218581|DEP domain containing 1B	AK083480|Depdc1b|218581|DEP domain containing 1B	AK036550|Depdc1b|218581|DEP domain containing 1B	AK043283|Depdc1b|218581|DEP domain containing 1B
mm9_v1_chr8_+_120022149_120022210	5.59511	HIF1A.p2	AK142173|Plcg2|234779|phospholipase C, gamma 2	AK170430|Plcg2|234779|phospholipase C, gamma 2	BC023877|Plcg2|234779|phospholipase C, gamma 2	NM_172285|Plcg2|234779|phospholipase C, gamma 2	AK151039|Plcg2|234779|phospholipase C, gamma 2
mm9_v1_chr10_+_79317316_79317391	5.52506	HIF1A.p2	AK151292|Ptbp1|19205|polypyrimidine tract binding protein 1	AK153561|Ptbp1|19205|polypyrimidine tract binding protein 1	NM_001077363|Ptbp1|19205|polypyrimidine tract binding protein 1	NM_008956|Ptbp1|19205|polypyrimidine tract binding protein 1	AK163274|Ptbp1|19205|polypyrimidine tract binding protein 1	BC007472|Ptbp1|19205|polypyrimidine tract binding protein 1	AK082600|Ptbp1|19205|polypyrimidine tract binding protein 1	AK150840|Ptbp1|19205|polypyrimidine tract binding protein 1	AK168392|Ptbp1|19205|polypyrimidine tract binding protein 1	AK037607|Ptbp1|19205|polypyrimidine tract binding protein 1	AK172712|Ptbp1|19205|polypyrimidine tract binding protein 1	AK044956|Ptbp1|19205|polypyrimidine tract binding protein 1	AK043824|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr8_-_124431581_124431590	5.47582	HIF1A.p2	AK142288|Slc7a5|20539|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5	NM_011404|Slc7a5|20539|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
mm9_v1_chr7_-_26035683_26035785	5.47443	HIF1A.p2	BC063092|Erf|13875|Ets2 repressor factor	BC053045|Erf|13875|Ets2 repressor factor	BC059176|Erf|13875|Ets2 repressor factor	AK159225|Erf|13875|Ets2 repressor factor	NM_010155|Erf|13875|Ets2 repressor factor
mm9_v1_chr8_+_131209680_131209783	5.46966	HIF1A.p2	BC050906|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK159689|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	Y00769|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr11_+_120810346_120810440	5.42437	HIF1A.p2	AK149707|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK149983|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	NM_001038653|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	NM_001038654|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK141381|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK166048|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK171260|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK169917|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3	AK165596|Slc16a3|80879|solute carrier family 16 (monocarboxylic acid transporters), member 3
mm9_v1_chr4_+_101092307_101092393	5.42331	HIF1A.p2	NM_009647|Ak4|11639|adenylate kinase 4	AK144439|Ak4|11639|adenylate kinase 4	BC086791|Ak4|11639|adenylate kinase 4	D85036|Ak4|11639|adenylate kinase 4	AB020239|Ak4|11639|adenylate kinase 4	BC086663|Ak4|11639|adenylate kinase 4	AK166975|Ak4|11639|adenylate kinase 4
mm9_v1_chr9_-_107888185_107888220	5.41916	HIF1A.p2	BC115538|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK020090|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK076092|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr1_+_16655263_16655349	5.40168	HIF1A.p2	NM_026392|Tmem70|70397|transmembrane protein 70	NM_027415|Tmem70|70397|transmembrane protein 70	AK003839|Tmem70|70397|transmembrane protein 70	AK005075|Tmem70|70397|transmembrane protein 70	AK008955|Tmem70|70397|transmembrane protein 70	AK151280|Tmem70|70397|transmembrane protein 70	AK169031|Tmem70|70397|transmembrane protein 70	BC011320|Tmem70|70397|transmembrane protein 70	AK167069|Tmem70|70397|transmembrane protein 70
mm9_v1_chr1_-_95375363_95375369	5.39687	HIF1A.p2	BC023806|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr11_-_88725877_88725929	5.37976	HIF1A.p2	AK076216|Akap1|11640|A kinase (PRKA) anchor protein 1	NM_001042541|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr7_-_52241669_52241769	5.3784	HIF1A.p2	BC051547|Prmt1|15469|protein arginine N-methyltransferase 1	BC002249|Prmt1|15469|protein arginine N-methyltransferase 1	AK182363|Prmt1|15469|protein arginine N-methyltransferase 1	AF232716|Prmt1|15469|protein arginine N-methyltransferase 1	AF232717|Prmt1|15469|protein arginine N-methyltransferase 1	AK088790|Prmt1|15469|protein arginine N-methyltransferase 1	NM_019830|Prmt1|15469|protein arginine N-methyltransferase 1	AK020120|Prmt1|15469|protein arginine N-methyltransferase 1	AK146927|Prmt1|15469|protein arginine N-methyltransferase 1	AK164421|Prmt1|15469|protein arginine N-methyltransferase 1	AK146975|Prmt1|15469|protein arginine N-methyltransferase 1	BC051953|Prmt1|15469|protein arginine N-methyltransferase 1	BC062964|Prmt1|15469|protein arginine N-methyltransferase 1	AK152342|Prmt1|15469|protein arginine N-methyltransferase 1
mm9_v1_chr4_+_46502141_46502235	5.35255	HIF1A.p2	AK156254|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AB041263|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK051157|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK088912|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK076290|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	AK169211|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	NM_053179|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)	BC057977|Nans|94181|N-acetylneuraminic acid synthase (sialic acid synthase)
mm9_v1_chr2_-_174264400_174264522	5.33824	HIF1A.p2	AK008370|Ctsz|64138|cathepsin Z	AF197479|Ctsz|64138|cathepsin Z	AK150329|Ctsz|64138|cathepsin Z	AK150894|Ctsz|64138|cathepsin Z	AK153147|Ctsz|64138|cathepsin Z	AK159826|Ctsz|64138|cathepsin Z	AK151440|Ctsz|64138|cathepsin Z	AK159118|Ctsz|64138|cathepsin Z	AK002710|Ctsz|64138|cathepsin Z	AK151585|Ctsz|64138|cathepsin Z	AK151994|Ctsz|64138|cathepsin Z	AK160001|Ctsz|64138|cathepsin Z	AK160028|Ctsz|64138|cathepsin Z	AK166047|Ctsz|64138|cathepsin Z	AK170963|Ctsz|64138|cathepsin Z	AK150947|Ctsz|64138|cathepsin Z	AK010912|Ctsz|64138|cathepsin Z	AK004095|Ctsz|64138|cathepsin Z	BC008619|Ctsz|64138|cathepsin Z	NM_022325|Ctsz|64138|cathepsin Z	AJ242663|Ctsz|64138|cathepsin Z	AF136277|Ctsz|64138|cathepsin Z	AK159618|Ctsz|64138|cathepsin Z	AK160354|Ctsz|64138|cathepsin Z
mm9_v1_chr9_-_96264446_96264498	5.32379	HIF1A.p2	AK196817|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr8_-_124431559_124431577	5.31735	HIF1A.p2	BC026131|Slc7a5|20539|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
mm9_v1_chr11_+_117710532_117710668	5.30627	HIF1A.p2	NM_001012273|Birc5|11799|baculoviral IAP repeat-containing 5	NM_009689|Birc5|11799|baculoviral IAP repeat-containing 5	AB013819|Birc5|11799|baculoviral IAP repeat-containing 5	AK018022|Birc5|11799|baculoviral IAP repeat-containing 5	BC004702|Birc5|11799|baculoviral IAP repeat-containing 5	AK142768|Birc5|11799|baculoviral IAP repeat-containing 5	AF077349|Birc5|11799|baculoviral IAP repeat-containing 5	EU366955|Birc5|11799|baculoviral IAP repeat-containing 5
mm9_v1_chr1_-_155396839_155396845	5.29052	HIF1A.p2	BC022734|Npl|74091|N-acetylneuraminate pyruvate lyase	AK154216|F630010C12Rik|100038670|RIKEN cDNA F630010C12 gene	AK002734|Npl|74091|N-acetylneuraminate pyruvate lyase	NM_028749|Npl|74091|N-acetylneuraminate pyruvate lyase	AK088859|Npl|74091|N-acetylneuraminate pyruvate lyase
mm9_v1_chr11_+_74462965_74463046	5.22173	HIF1A.p2	AK145708|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK157310|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154925|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	NM_001081158|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154146|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK036540|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK150045|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	BC072573|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene
mm9_v1_chr2_+_27370649_27370751	5.20912	HIF1A.p2	NM_080848|Wdr5|140858|WD repeat domain 5	BC025801|Wdr5|140858|WD repeat domain 5	AK075937|Wdr5|140858|WD repeat domain 5	AK144091|Wdr5|140858|WD repeat domain 5	BC016103|Wdr5|140858|WD repeat domain 5
mm9_v1_chr7_+_28233013_28233084	5.19351	HIF1A.p2	BC006617|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	AK153153|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chr1_-_38186482_38186550	5.18494	HIF1A.p2	BC058093|Rev1|56210|REV1 homolog (S. cerevisiae)	NM_019570|Rev1|56210|REV1 homolog (S. cerevisiae)	AK048838|Rev1|56210|REV1 homolog (S. cerevisiae)
mm9_v1_chr11_-_102680999_102681013	5.16401	HIF1A.p2	BC071230|Gjc1|14615|gap junction protein, gamma 1	NM_001159383|Gjc1|14615|gap junction protein, gamma 1	AY390396|Gjc1|14615|gap junction protein, gamma 1
mm9_v1_chr9_+_50665024_50665086	5.13362	HIF1A.p2	NM_001034085|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	NM_028614|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	BC056218|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK136106|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK077158|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	AK161392|Ppp2r1b|73699|protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform
mm9_v1_chr18_-_52689279_52689397	5.04221	HIF1A.p2	AK159199|Lox|16948|lysyl oxidase	AK159263|Lox|16948|lysyl oxidase	AK166386|Lox|16948|lysyl oxidase	BC018439|Lox|16948|lysyl oxidase	AK141995|Lox|16948|lysyl oxidase	NM_010728|Lox|16948|lysyl oxidase
mm9_v1_chr10_-_81063566_81063644	5.02464	HIF1A.p2	BC023315|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)	AK135768|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)	AF145957|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)	NM_053254|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)
mm9_v1_chr4_+_149611305_149611392	5.01549	HIF1A.p2	NM_023119|Eno1|13806|enolase 1, alpha non-neuron	AK002336|Eno1|13806|enolase 1, alpha non-neuron	AK014335|Eno1|13806|enolase 1, alpha non-neuron	AK147987|Eno1|13806|enolase 1, alpha non-neuron	AK150161|Eno1|13806|enolase 1, alpha non-neuron	AK150192|Eno1|13806|enolase 1, alpha non-neuron	AK153321|Eno1|13806|enolase 1, alpha non-neuron	AK002322|Eno1|13806|enolase 1, alpha non-neuron	BC003934|Eno1|13806|enolase 1, alpha non-neuron	AK204692|Eno1|13806|enolase 1, alpha non-neuron	AK088788|Eno1|13806|enolase 1, alpha non-neuron	X52379|Eno1|13806|enolase 1, alpha non-neuron	BC003891|Eno1|13806|enolase 1, alpha non-neuron	BC010685|Eno1|13806|enolase 1, alpha non-neuron	BC083334|Eno1|13806|enolase 1, alpha non-neuron	BC024644|Eno1|13806|enolase 1, alpha non-neuron	BC039179|Eno1|13806|enolase 1, alpha non-neuron
mm9_v1_chr15_+_61869529_61869619	4.9456	HIF1A.p2	AK043790|Pvt1|19296|plasmacytoma variant translocation 1	AK030859|Pvt1|19296|plasmacytoma variant translocation 1	AK165927|Pvt1|19296|plasmacytoma variant translocation 1	AK043252|Pvt1|19296|plasmacytoma variant translocation 1	AK169445|Pvt1|19296|plasmacytoma variant translocation 1	AK165907|Pvt1|19296|plasmacytoma variant translocation 1	AK090048|Pvt1|19296|plasmacytoma variant translocation 1	AK169927|Pvt1|19296|plasmacytoma variant translocation 1
mm9_v1_chr4_+_147965596_147965685	4.93792	HIF1A.p2	AK028359|Srm|20810|spermidine synthase	NM_009272|Srm|20810|spermidine synthase	AK051101|Srm|20810|spermidine synthase	BC005566|Srm|20810|spermidine synthase	L19311|Srm|20810|spermidine synthase	AK146395|Srm|20810|spermidine synthase
mm9_v1_chr1_+_93698037_93698053	4.93034	HIF1A.p2	AK011180|Twist2|13345|twist homolog 2 (Drosophila)	AK011861|Twist2|13345|twist homolog 2 (Drosophila)	BC090636|Twist2|13345|twist homolog 2 (Drosophila)	NM_007855|Twist2|13345|twist homolog 2 (Drosophila)	U36384|Twist2|13345|twist homolog 2 (Drosophila)
mm9_v1_chr18_+_46757333_46757491	4.92723	HIF1A.p2	AK019451|Eif1a|13664|eukaryotic translation initiation factor 1A	NM_010120|Eif1a|13664|eukaryotic translation initiation factor 1A	AK013268|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150651|Eif1a|13664|eukaryotic translation initiation factor 1A	AF026481|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150673|Eif1a|13664|eukaryotic translation initiation factor 1A	AK150677|Eif1a|13664|eukaryotic translation initiation factor 1A	AK009026|Eif1a|13664|eukaryotic translation initiation factor 1A	AK166368|Eif1a|13664|eukaryotic translation initiation factor 1A	BC027437|Eif1a|13664|eukaryotic translation initiation factor 1A	AK167333|Eif1a|13664|eukaryotic translation initiation factor 1A
mm9_v1_chr1_+_137662648_137662798	4.89059	HIF1A.p2	NM_013750|Phlda3|27280|pleckstrin homology-like domain, family A, member 3	AK003767|Phlda3|27280|pleckstrin homology-like domain, family A, member 3	BC023376|Phlda3|27280|pleckstrin homology-like domain, family A, member 3	BC023408|Phlda3|27280|pleckstrin homology-like domain, family A, member 3
mm9_v1_chr6_+_29222698_29222749	4.88105	HIF1A.p2	BC083056|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	AF141311|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr16_+_20141134_20141212	4.88007	HIF1A.p2	NM_001033237|Yeats2|208146|YEATS domain containing 2	NM_001145930|Yeats2|208146|YEATS domain containing 2	NM_001145931|Yeats2|208146|YEATS domain containing 2	AK165933|Yeats2|208146|YEATS domain containing 2	AK160791|Yeats2|208146|YEATS domain containing 2
mm9_v1_chr2_-_31939210_31939226	4.87692	HIF1A.p2	AK079514|Fam78a|241303|family with sequence similarity 78, member A	NM_175511|Fam78a|241303|family with sequence similarity 78, member A	AK077626|Fam78a|241303|family with sequence similarity 78, member A
mm9_v1_chr10_-_75322897_75322929	4.80393	HIF1A.p2	L07607|Mif|17319|macrophage migration inhibitory factor	Z23048|Mif|17319|macrophage migration inhibitory factor
mm9_v1_chr10_-_60610398_60610452	4.79642	HIF1A.p2	NM_009163|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr16_+_14361637_14361715	4.79548	HIF1A.p2	AK029876|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	NM_008576|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AK150015|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AK152781|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	BC090617|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	AF022908|Abcc1|17250|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
mm9_v1_chr17_+_35137851_35137869	4.79423	HIF1A.p2	NM_011690|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr12_-_40764514_40764542	4.79368	HIF1A.p2	AK006286|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr3_+_121948693_121948990	4.79099	HIF1A.p2	U95053|Gclm|14630|glutamate-cysteine ligase, modifier subunit	CT010256|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK176933|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK184377|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr3_-_8923789_8923856	4.77248	HIF1A.p2	AK088314|Mrps28|66230|mitochondrial ribosomal protein S28	AK011036|Mrps28|66230|mitochondrial ribosomal protein S28	BC028530|Mrps28|66230|mitochondrial ribosomal protein S28	AK005229|Mrps28|66230|mitochondrial ribosomal protein S28	NM_025434|Mrps28|66230|mitochondrial ribosomal protein S28
mm9_v1_chr6_-_52108249_52108315	4.76855	HIF1A.p2	BC138097|Hoxa1|15394|homeobox A1	BC138098|Hoxa1|15394|homeobox A1	M22115|Hoxa1|15394|homeobox A1	AK143943|Hoxa1|15394|homeobox A1	AK083575|Hoxa1|15394|homeobox A1	NM_010449|Hoxa1|15394|homeobox A1
mm9_v1_chr5_-_111082269_111082383	4.76839	HIF1A.p2	AK184847|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK172310|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)
mm9_v1_chr10_+_121176978_121177017	4.75213	HIF1A.p2	BC065058|BC048403|270802|cDNA sequence BC048403	NM_173022|BC048403|270802|cDNA sequence BC048403	AK166238|BC048403|270802|cDNA sequence BC048403	AK138662|BC048403|270802|cDNA sequence BC048403	AK162911|BC048403|270802|cDNA sequence BC048403	AK087110|BC048403|270802|cDNA sequence BC048403	AK169891|BC048403|270802|cDNA sequence BC048403
mm9_v1_chr3_+_121948399_121948534	4.74972	HIF1A.p2	AK028236|Gclm|14630|glutamate-cysteine ligase, modifier subunit	NM_008129|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK172387|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr3_-_142544883_142544984	4.72026	HIF1A.p2	AK046248|Pkn2|109333|protein kinase N2	AK171092|Pkn2|109333|protein kinase N2	BC052073|Pkn2|109333|protein kinase N2	AK077910|Pkn2|109333|protein kinase N2	AK028469|Pkn2|109333|protein kinase N2	AK049713|Pkn2|109333|protein kinase N2	AK133298|Pkn2|109333|protein kinase N2	NM_178654|Pkn2|109333|protein kinase N2
mm9_v1_chr7_+_105851755_105851872	4.71888	HIF1A.p2	AK013663|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC049103|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_028410|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
mm9_v1_chr12_+_52449216_52449372	4.71311	HIF1A.p2	NM_001015099|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167963|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	NM_001167964|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK033513|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK129332|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	BC086455|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK084256|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase	AK031333|G2e3|217558|G2/M-phase specific E3 ubiquitin ligase
mm9_v1_chr8_+_131209614_131209661	4.69924	HIF1A.p2	AK088016|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK135521|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)	AK167682|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr14_+_70008874_70008979	4.69586	HIF1A.p2	BC086801|Loxl2|94352|lysyl oxidase-like 2	AK145323|Loxl2|94352|lysyl oxidase-like 2	AK034957|Loxl2|94352|lysyl oxidase-like 2	AK159386|Loxl2|94352|lysyl oxidase-like 2
mm9_v1_chr11_+_100931369_100931476	4.69275	HIF1A.p2	AK143546|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	NM_013792|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK170758|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK158045|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK164125|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	BC055733|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	U85247|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr10_-_75322941_75323054	4.69093	HIF1A.p2	AK010691|Mif|17319|macrophage migration inhibitory factor	BC086928|Mif|17319|macrophage migration inhibitory factor	BC100605|Mif|17319|macrophage migration inhibitory factor	L02913|Mif|17319|macrophage migration inhibitory factor	AK152211|Mif|17319|macrophage migration inhibitory factor	BC024895|Mif|17319|macrophage migration inhibitory factor	L10613|Mif|17319|macrophage migration inhibitory factor	AK008939|Mif|17319|macrophage migration inhibitory factor	AK013328|Mif|17319|macrophage migration inhibitory factor	NM_010798|Mif|17319|macrophage migration inhibitory factor
mm9_v1_chr10_-_127648817_127648880	4.65467	HIF1A.p2	BC014757|Spryd4|66701|SPRY domain containing 4	NM_025716|Spryd4|66701|SPRY domain containing 4	AK014623|Spryd4|66701|SPRY domain containing 4	AK080726|Spryd4|66701|SPRY domain containing 4	AK082745|Spryd4|66701|SPRY domain containing 4
mm9_v1_chr12_+_77471506_77471590	4.6481	HIF1A.p2	AK029762|Zbtb1|268564|zinc finger and BTB domain containing 1	AK131985|Zbtb1|268564|zinc finger and BTB domain containing 1	BC012239|Zbtb1|268564|zinc finger and BTB domain containing 1
mm9_v1_chr6_+_29222664_29222676	4.63014	HIF1A.p2	AK144676|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	AK009377|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr2_+_172847371_172847458	4.63009	HIF1A.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chrX_+_103382432_103382595	4.62908	HIF1A.p2	NM_008828|Pgk1|18655|phosphoglycerate kinase 1	AK145846|Pgk1|18655|phosphoglycerate kinase 1	AK133877|Pgk1|18655|phosphoglycerate kinase 1	AK164440|Pgk1|18655|phosphoglycerate kinase 1	BC108372|Pgk1|18655|phosphoglycerate kinase 1	BC023819|Pgk1|18655|phosphoglycerate kinase 1	BC032167|Pgk1|18655|phosphoglycerate kinase 1	AK167441|Pgk1|18655|phosphoglycerate kinase 1	AK167459|Pgk1|18655|phosphoglycerate kinase 1	AK167710|Pgk1|18655|phosphoglycerate kinase 1	BC083355|Pgk1|18655|phosphoglycerate kinase 1	M15668|Pgk1|18655|phosphoglycerate kinase 1	EF437325|Pgk1|18655|phosphoglycerate kinase 1
mm9_v1_chr11_-_116713532_116713613	4.61529	HIF1A.p2	AF250135|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr12_-_32746061_32746210	4.60449	HIF1A.p2	BC048710|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK011647|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK138963|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK041013|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	AK135621|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta	NM_011158|Prkar2b|19088|protein kinase, cAMP dependent regulatory, type II beta
mm9_v1_chr4_-_41688124_41688233	4.60246	HIF1A.p2	AF226605|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390764|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390765|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390766|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AY390768|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AF030198|Sigmar1|18391|sigma non-opioid intracellular receptor 1	BC019930|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AK159886|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AK002718|Sigmar1|18391|sigma non-opioid intracellular receptor 1	BC002000|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AF004927|Sigmar1|18391|sigma non-opioid intracellular receptor 1	NM_011014|Sigmar1|18391|sigma non-opioid intracellular receptor 1	AK154300|Sigmar1|18391|sigma non-opioid intracellular receptor 1
mm9_v1_chr14_+_31832340_31832345	4.58461	HIF1A.p2	AK166588|Pbrm1|66923|polybromo 1
mm9_v1_chr6_+_17015159_17015226	4.57646	HIF1A.p2	AK083910|Tes|21753|testis derived transcript	AK132249|Tes|21753|testis derived transcript	AK167274|Tes|21753|testis derived transcript	BC010465|Tes|21753|testis derived transcript	AK145609|Tes|21753|testis derived transcript	AK167101|Tes|21753|testis derived transcript	BC051103|Tes|21753|testis derived transcript	BC003808|Tes|21753|testis derived transcript
mm9_v1_chr16_+_70314331_70314522	4.56119	HIF1A.p2	NM_028803|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	BC017541|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK009815|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK013167|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK206164|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1
mm9_v1_chr17_-_46168654_46168719	4.54885	HIF1A.p2	AY707864|Vegfa|22339|vascular endothelial growth factor A	AY750956|Vegfa|22339|vascular endothelial growth factor A	AY750957|Vegfa|22339|vascular endothelial growth factor A	EF028705|Vegfa|22339|vascular endothelial growth factor A	BC061468|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr18_+_67448839_67448957	4.54124	HIF1A.p2	AK154489|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK170962|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AF353730|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	NM_053261|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK171626|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK154845|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	BC011093|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2
mm9_v1_chr5_-_90652790_90652982	4.53885	HIF1A.p2	BC038311|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr15_-_94373918_94373937	4.5308	HIF1A.p2	AK029027|Pus7l|78895|pseudouridylate synthase 7 homolog (S. cerevisiae)-like	AK040257|Pus7l|78895|pseudouridylate synthase 7 homolog (S. cerevisiae)-like	AK019372|Pus7l|78895|pseudouridylate synthase 7 homolog (S. cerevisiae)-like	NM_172437|Pus7l|78895|pseudouridylate synthase 7 homolog (S. cerevisiae)-like
mm9_v1_chr6_+_29383152_29383347	4.51227	HIF1A.p2	NM_001081185|Flnc|68794|filamin C, gamma	AK051985|Flnc|68794|filamin C, gamma	BC151097|Flnc|68794|filamin C, gamma	BC158128|Flnc|68794|filamin C, gamma	BC172159|Flnc|68794|filamin C, gamma
mm9_v1_chr2_+_92024338_92024494	4.50388	HIF1A.p2	NM_138755|Phf21a|192285|PHD finger protein 21A	AB105178|Phf21a|192285|PHD finger protein 21A	AK089411|Phf21a|192285|PHD finger protein 21A	BC019181|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr12_+_17551771_17551797	4.49253	HIF1A.p2	AK166093|Odc1|18263|ornithine decarboxylase, structural 1	AK077679|Odc1|18263|ornithine decarboxylase, structural 1	AK139610|Odc1|18263|ornithine decarboxylase, structural 1	AK150283|Odc1|18263|ornithine decarboxylase, structural 1	AK150343|Odc1|18263|ornithine decarboxylase, structural 1	AK152525|Odc1|18263|ornithine decarboxylase, structural 1	AK168219|Odc1|18263|ornithine decarboxylase, structural 1	AK169214|Odc1|18263|ornithine decarboxylase, structural 1	AK172568|Odc1|18263|ornithine decarboxylase, structural 1	S64539|Odc1|18263|ornithine decarboxylase, structural 1	BC083122|Odc1|18263|ornithine decarboxylase, structural 1	BC033264|Odc1|18263|ornithine decarboxylase, structural 1	BC059826|Odc1|18263|ornithine decarboxylase, structural 1
mm9_v1_chr4_-_133801438_133801522	4.48682	HIF1A.p2	AK156931|Zfp593|68040|zinc finger protein 593	BC003465|Zfp593|68040|zinc finger protein 593	AK014081|Zfp593|68040|zinc finger protein 593	AK133585|Zfp593|68040|zinc finger protein 593	AK005247|Zfp593|68040|zinc finger protein 593	NM_024215|Zfp593|68040|zinc finger protein 593
mm9_v1_chr5_-_111209468_111209636	4.48287	HIF1A.p2	BC021446|Pus1|56361|pseudouridine synthase 1	BC034359|Pus1|56361|pseudouridine synthase 1	AB041563|Pus1|56361|pseudouridine synthase 1	AK089258|Pus1|56361|pseudouridine synthase 1	NM_001025561|Pus1|56361|pseudouridine synthase 1	NM_019700|Pus1|56361|pseudouridine synthase 1	NM_001025562|Pus1|56361|pseudouridine synthase 1	AK161521|Pus1|56361|pseudouridine synthase 1
mm9_v1_chr5_+_65361309_65361366	4.44548	HIF1A.p2	AM162548|Fam114a1|68303|family with sequence similarity 114, member A1	BC110359|Fam114a1|68303|family with sequence similarity 114, member A1	AK030360|Fam114a1|68303|family with sequence similarity 114, member A1	NM_026667|Fam114a1|68303|family with sequence similarity 114, member A1	AK014725|Fam114a1|68303|family with sequence similarity 114, member A1	BC027235|Fam114a1|68303|family with sequence similarity 114, member A1	AK020262|Fam114a1|68303|family with sequence similarity 114, member A1	AK007950|Fam114a1|68303|family with sequence similarity 114, member A1	AK017336|Fam114a1|68303|family with sequence similarity 114, member A1	BC089499|Fam114a1|68303|family with sequence similarity 114, member A1
mm9_v1_chr3_+_87710187_87710249	4.44363	HIF1A.p2	NM_008231|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr2_+_127951773_127951787	4.43116	HIF1A.p2	AK031285|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK037885|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK150464|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK152472|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK153542|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK162975|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_009754|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207680|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	NM_207681|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK082613|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	BC019556|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK011490|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)	AK050192|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr8_+_34842513_34842603	4.4145	HIF1A.p2	AK088342|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	NM_026584|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK146803|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	BC020016|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)	AK021183|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr11_-_33063024_33063083	4.39117	HIF1A.p2	BC085278|Npm1|18148|nucleophosmin 1	BC092378|Npm1|18148|nucleophosmin 1	M33212|Npm1|18148|nucleophosmin 1	NM_008722|Npm1|18148|nucleophosmin 1	BC054755|Npm1|18148|nucleophosmin 1	BC090843|Npm1|18148|nucleophosmin 1	AK088923|Npm1|18148|nucleophosmin 1	AK145124|Npm1|18148|nucleophosmin 1	AK150164|Npm1|18148|nucleophosmin 1	AK153901|Npm1|18148|nucleophosmin 1	AK005498|Npm1|18148|nucleophosmin 1	AK028253|Npm1|18148|nucleophosmin 1	AK135517|Npm1|18148|nucleophosmin 1	AK145813|Npm1|18148|nucleophosmin 1	BC089546|Npm1|18148|nucleophosmin 1	AK005420|Npm1|18148|nucleophosmin 1	AK028370|Npm1|18148|nucleophosmin 1	AK165860|Npm1|18148|nucleophosmin 1	GU214027|Npm1|18148|nucleophosmin 1
mm9_v1_chr16_-_22163035_22163154	4.36234	HIF1A.p2	AY531659|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK077404|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	BC023758|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK049196|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	BC054552|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK159654|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr8_+_34763918_34764151	4.36208	HIF1A.p2	AK040136|Gsr|14782|glutathione reductase	X76341|Gsr|14782|glutathione reductase	AK159678|Gsr|14782|glutathione reductase	AK019177|Gsr|14782|glutathione reductase	AK159218|Gsr|14782|glutathione reductase	AK151063|Gsr|14782|glutathione reductase	AK151247|Gsr|14782|glutathione reductase	AK152873|Gsr|14782|glutathione reductase	AK084328|Gsr|14782|glutathione reductase	AK167393|Gsr|14782|glutathione reductase	AK151674|Gsr|14782|glutathione reductase
mm9_v1_chr6_+_29222487_29222646	4.34415	HIF1A.p2	NM_001190461|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene	NM_023516|2310016C08Rik|69573|RIKEN cDNA 2310016C08 gene
mm9_v1_chr6_+_125081890_125081965	4.33531	HIF1A.p2	NM_138747|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK079914|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK154006|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	AK156568|Nop2|110109|NOP2 nucleolar protein homolog (yeast)	BC007151|Nop2|110109|NOP2 nucleolar protein homolog (yeast)
mm9_v1_chr3_+_87710282_87710350	4.33019	HIF1A.p2	AK017863|Hdgf|15191|hepatoma-derived growth factor	BC021654|Hdgf|15191|hepatoma-derived growth factor	BC005713|Hdgf|15191|hepatoma-derived growth factor	AF251787|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr9_-_34983552_34983647	4.30209	HIF1A.p2	AK171018|Dcps|69305|decapping enzyme, scavenger	AK005584|Dcps|69305|decapping enzyme, scavenger	NM_027030|Dcps|69305|decapping enzyme, scavenger	AY040775|Dcps|69305|decapping enzyme, scavenger	AK169641|Dcps|69305|decapping enzyme, scavenger	BC016273|Dcps|69305|decapping enzyme, scavenger	AK078253|Dcps|69305|decapping enzyme, scavenger
mm9_v1_chr2_+_144096600_144096679	4.29325	HIF1A.p2	AK159286|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	BC063088|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr2_+_84667196_84667249	4.28243	HIF1A.p2	AF150090|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	BC031448|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	AK013546|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)
mm9_v1_chr11_-_88725811_88725842	4.2788	HIF1A.p2	BC065135|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr11_-_60624733_60624766	4.22189	HIF1A.p2	NM_009171|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr11_+_32247758_32247888	4.21947	HIF1A.p2	NM_177364|Sh3pxd2b|268396|SH3 and PX domains 2B	AK169978|Sh3pxd2b|268396|SH3 and PX domains 2B	AK220175|Sh3pxd2b|268396|SH3 and PX domains 2B	AK090119|Sh3pxd2b|268396|SH3 and PX domains 2B	AK042261|Sh3pxd2b|268396|SH3 and PX domains 2B	BC141306|Sh3pxd2b|268396|SH3 and PX domains 2B	AK043324|Sh3pxd2b|268396|SH3 and PX domains 2B	AK089330|Sh3pxd2b|268396|SH3 and PX domains 2B	AK163471|Sh3pxd2b|268396|SH3 and PX domains 2B	AK171384|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115711|Sh3pxd2b|268396|SH3 and PX domains 2B	BC115764|Sh3pxd2b|268396|SH3 and PX domains 2B	AK154898|Sh3pxd2b|268396|SH3 and PX domains 2B	AB430861|Sh3pxd2b|268396|SH3 and PX domains 2B
mm9_v1_chr10_-_6373388_6373465	4.21549	HIF1A.p2	AK075931|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK160025|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK036284|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK028211|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK038579|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170785|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170786|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_172308|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr16_+_70314306_70314318	4.21518	HIF1A.p2	AK050365|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1	AK050423|Gbe1|74185|glucan (1,4-alpha-), branching enzyme 1
mm9_v1_chr6_-_13557981_13558062	4.19722	HIF1A.p2	BC024911|Tmem168|101118|transmembrane protein 168	BC007160|Tmem168|101118|transmembrane protein 168	AK054353|Tmem168|101118|transmembrane protein 168	AK152957|Tmem168|101118|transmembrane protein 168	AK034589|Tmem168|101118|transmembrane protein 168	AK170302|Tmem168|101118|transmembrane protein 168	AK018471|Tmem168|101118|transmembrane protein 168	AK051532|Tmem168|101118|transmembrane protein 168	NM_028990|Tmem168|101118|transmembrane protein 168
mm9_v1_chr3_+_152059620_152059689	4.19238	HIF1A.p2	BC060614|Zzz3|108946|zinc finger, ZZ domain containing 3	NM_198416|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr5_-_34979701_34979744	4.1832	HIF1A.p2	AK152438|Mfsd10|68294|major facilitator superfamily domain containing 10
mm9_v1_chr4_+_140703968_140703990	4.16956	HIF1A.p2	AK028867|Fbxo42|213499|F-box protein 42
mm9_v1_chr10_+_122116022_122116053	4.14447	HIF1A.p2	
mm9_v1_chrX_-_91077426_91077556	4.12516	HIF1A.p2	AK075879|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	BC008126|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	NM_145630|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK132024|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK075985|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK088478|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3	AK169874|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3
mm9_v1_chr1_-_39634096_39634285	4.1236	HIF1A.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr1_-_169215216_169215257	4.10685	HIF1A.p2	AK053745|Uck2|80914|uridine-cytidine kinase 2	AK082837|Uck2|80914|uridine-cytidine kinase 2	AK155939|Uck2|80914|uridine-cytidine kinase 2	AK168318|Uck2|80914|uridine-cytidine kinase 2	AF236636|Uck2|80914|uridine-cytidine kinase 2	NM_030724|Uck2|80914|uridine-cytidine kinase 2
mm9_v1_chr11_-_60230506_60230604	4.07937	HIF1A.p2	BC013607|Atpaf2|246782|ATP synthase mitochondrial F1 complex assembly factor 2	AK078500|Atpaf2|246782|ATP synthase mitochondrial F1 complex assembly factor 2	NM_145427|Atpaf2|246782|ATP synthase mitochondrial F1 complex assembly factor 2
mm9_v1_chr4_-_138908210_138908289	4.07419	HIF1A.p2	AK011387|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC005734|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	NM_023536|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	AK171445|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC096556|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC138221|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC145205|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)	BC145209|Mrto4|69902|MRT4, mRNA turnover 4, homolog (S. cerevisiae)
mm9_v1_chr5_-_8422533_8422723	4.00467	HIF1A.p2	BC138709|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC138710|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC145392|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AJ003132|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC069983|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK132403|Dbf4|27214|DBF4 homolog (S. cerevisiae)	AK014480|Dbf4|27214|DBF4 homolog (S. cerevisiae)	BC050827|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_001190717|Dbf4|27214|DBF4 homolog (S. cerevisiae)	NM_013726|Dbf4|27214|DBF4 homolog (S. cerevisiae)
mm9_v1_chr16_-_78576914_78576958	3.98531	HIF1A.p2	AK044670|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr4_-_62180914_62181170	3.97574	HIF1A.p2	BC018236|Alad|17025|aminolevulinate, delta-, dehydratase	AK167673|Alad|17025|aminolevulinate, delta-, dehydratase	AK002300|Alad|17025|aminolevulinate, delta-, dehydratase	AK032908|Alad|17025|aminolevulinate, delta-, dehydratase	AK168119|Alad|17025|aminolevulinate, delta-, dehydratase	AK168132|Alad|17025|aminolevulinate, delta-, dehydratase	BC055930|Alad|17025|aminolevulinate, delta-, dehydratase	NM_008525|Alad|17025|aminolevulinate, delta-, dehydratase
mm9_v1_chr4_-_55545211_55545278	3.9569	HIF1A.p2	BC010301|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr15_-_36538691_36538736	3.90094	HIF1A.p2	AK152064|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC046233|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159703|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK044829|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160883|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160968|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161671|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK168466|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK089747|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK150839|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159733|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK005009|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK133196|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161123|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	NM_008774|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr5_-_90652986_90653036	3.88834	HIF1A.p2	AK156053|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC138972|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145479|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145486|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC145728|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001033310|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001163456|Cox18|231430|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr7_+_116847191_116847288	3.87915	HIF1A.p2	AK163012|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK155010|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK086219|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK159903|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	NM_020616|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene
mm9_v1_chr11_+_97660946_97661134	3.87007	HIF1A.p2	X96702|Lasp1|16796|LIM and SH3 protein 1	AK148858|Lasp1|16796|LIM and SH3 protein 1	AK034404|Lasp1|16796|LIM and SH3 protein 1	AK049199|Lasp1|16796|LIM and SH3 protein 1	AK078445|Lasp1|16796|LIM and SH3 protein 1	AK168521|Lasp1|16796|LIM and SH3 protein 1	AK169381|Lasp1|16796|LIM and SH3 protein 1	NM_010688|Lasp1|16796|LIM and SH3 protein 1	AK154656|Lasp1|16796|LIM and SH3 protein 1	BC010840|Lasp1|16796|LIM and SH3 protein 1	X96973|Lasp1|16796|LIM and SH3 protein 1	CT010288|Lasp1|16796|LIM and SH3 protein 1
mm9_v1_chr3_-_27609279_27609407	3.86841	HIF1A.p2	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr8_+_90796301_90796301	3.8681	HIF1A.p2	NM_007406|Adcy7|11513|adenylate cyclase 7	U12919|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr2_+_167363696_167363726	3.847	HIF1A.p2	AK144478|Snai1|20613|snail homolog 1 (Drosophila)	BC034857|Snai1|20613|snail homolog 1 (Drosophila)	NM_011427|Snai1|20613|snail homolog 1 (Drosophila)
mm9_v1_chr7_+_28232980_28232996	3.84254	HIF1A.p2	BC027279|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	NM_144923|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chr4_+_140703847_140703905	3.83825	HIF1A.p2	AK165284|Fbxo42|213499|F-box protein 42	AK151503|Fbxo42|213499|F-box protein 42
mm9_v1_chr13_+_55736365_55736414	3.83	HIF1A.p2	AK008639|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	AK137835|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC019403|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	NM_145975|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	AK088950|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC092240|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	BC028552|Ddx46|212880|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
mm9_v1_chr14_+_31832323_31832337	3.82736	HIF1A.p2	AK165182|Pbrm1|66923|polybromo 1	NM_001081251|Pbrm1|66923|polybromo 1
mm9_v1_chr10_-_77472501_77472567	3.82479	HIF1A.p2	NM_008826|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr4_-_55545337_55545348	3.8225	HIF1A.p2	U70662|Klf4|16600|Kruppel-like factor 4 (gut)	AK144942|Klf4|16600|Kruppel-like factor 4 (gut)	AK155343|Klf4|16600|Kruppel-like factor 4 (gut)	NM_010637|Klf4|16600|Kruppel-like factor 4 (gut)
mm9_v1_chr9_-_58160966_58161035	3.81735	HIF1A.p2	BC098243|Loxl1|16949|lysyl oxidase-like 1	BC037999|Loxl1|16949|lysyl oxidase-like 1	AK078512|Loxl1|16949|lysyl oxidase-like 1	NM_010729|Loxl1|16949|lysyl oxidase-like 1
mm9_v1_chr19_-_45824047_45824092	3.8114	HIF1A.p2	AK011749|Npm3|18150|nucleoplasmin 3	NM_008723|Npm3|18150|nucleoplasmin 3	U64450|Npm3|18150|nucleoplasmin 3	AK146603|Npm3|18150|nucleoplasmin 3	AK171848|Npm3|18150|nucleoplasmin 3	AK157198|Npm3|18150|nucleoplasmin 3	BC048491|Npm3|18150|nucleoplasmin 3
mm9_v1_chr11_-_75161767_75161884	3.81124	HIF1A.p2	AK177196|Rpa1|68275|replication protein A1	AK197958|Rpa1|68275|replication protein A1	AK203654|Rpa1|68275|replication protein A1	AK167598|Rpa1|68275|replication protein A1	AK150785|Rpa1|68275|replication protein A1	AK165316|Rpa1|68275|replication protein A1	BC019119|Rpa1|68275|replication protein A1	AK035084|Rpa1|68275|replication protein A1	AK152296|Rpa1|68275|replication protein A1	AK153107|Rpa1|68275|replication protein A1	AK165944|Rpa1|68275|replication protein A1	AK169599|Rpa1|68275|replication protein A1	AK148035|Rpa1|68275|replication protein A1	AK168400|Rpa1|68275|replication protein A1	AK151590|Rpa1|68275|replication protein A1	AK153144|Rpa1|68275|replication protein A1	NM_001164223|Rpa1|68275|replication protein A1	NM_026653|Rpa1|68275|replication protein A1
mm9_v1_chr7_+_127986324_127986492	3.79215	HIF1A.p2	AK028524|Eef2k|13631|eukaryotic elongation factor-2 kinase	BC003433|Eef2k|13631|eukaryotic elongation factor-2 kinase	NM_007908|Eef2k|13631|eukaryotic elongation factor-2 kinase
mm9_v1_chr5_+_123465266_123465312	3.77392	HIF1A.p2	AB271214|Orai1|109305|ORAI calcium release-activated calcium modulator 1	AM712355|Orai1|109305|ORAI calcium release-activated calcium modulator 1	BC023149|Orai1|109305|ORAI calcium release-activated calcium modulator 1
mm9_v1_chr5_+_147760198_147760451	3.76602	HIF1A.p2	NM_025652|Gtf3a|66596|general transcription factor III A	AF391799|Gtf3a|66596|general transcription factor III A	AK008247|Gtf3a|66596|general transcription factor III A	AK011845|Gtf3a|66596|general transcription factor III A	AK143627|Gtf3a|66596|general transcription factor III A	AK012797|Gtf3a|66596|general transcription factor III A	AK017234|Gtf3a|66596|general transcription factor III A	AK183221|Gtf3a|66596|general transcription factor III A
mm9_v1_chr19_+_56471731_56471767	3.7619	HIF1A.p2	AK154978|Casp7|12369|caspase 7	BC005428|Casp7|12369|caspase 7	D86353|Casp7|12369|caspase 7
mm9_v1_chr9_-_34924338_34924474	3.76044	HIF1A.p2	AB061305|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	BC011121|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	D28941|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	BC050773|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	NM_009178|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
mm9_v1_chr4_+_151699834_151699937	3.75322	HIF1A.p2	BC096390|Rpl22|19934|ribosomal protein L22
mm9_v1_chr11_-_74982551_74982653	3.75227	HIF1A.p2	AF036334|Hic1|15248|hypermethylated in cancer 1
mm9_v1_chr14_+_31832374_31832396	3.74247	HIF1A.p2	AK030781|Pbrm1|66923|polybromo 1
mm9_v1_chr10_+_84565428_84565600	3.72562	HIF1A.p2	AK005698|AI597468|103266|expressed sequence AI597468	BC086492|AI597468|103266|expressed sequence AI597468	AK142035|AI597468|103266|expressed sequence AI597468
mm9_v1_chr6_-_29162226_29162288	3.72211	HIF1A.p2	BC053416|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1	NM_011829|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr2_+_153171730_153171874	3.71066	HIF1A.p2	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr6_-_39507815_39507904	3.69956	HIF1A.p2	AK048041|Dennd2a|209773|DENN/MADD domain containing 2A	AK081176|Dennd2a|209773|DENN/MADD domain containing 2A	NM_172477|Dennd2a|209773|DENN/MADD domain containing 2A
mm9_v1_chr11_-_60624592_60624671	3.6977	HIF1A.p2	AF237702|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94478|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	X94479|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	BC026055|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK132342|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)	AK010439|Shmt1|20425|serine hydroxymethyltransferase 1 (soluble)
mm9_v1_chr3_+_152058937_152059038	3.69271	HIF1A.p2	NM_001080755|Zzz3|108946|zinc finger, ZZ domain containing 3	AK131150|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr3_-_135354151_135354490	3.67246	HIF1A.p2	M57999|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr2_+_156665812_156665874	3.66578	HIF1A.p2	AK029490|Tgif2|228839|TGFB-induced factor homeobox 2	NM_173396|Tgif2|228839|TGFB-induced factor homeobox 2	BC138706|Tgif2|228839|TGFB-induced factor homeobox 2	BC138705|Tgif2|228839|TGFB-induced factor homeobox 2	AK157623|Tgif2|228839|TGFB-induced factor homeobox 2	AK017884|Tgif2|228839|TGFB-induced factor homeobox 2
mm9_v1_chr4_-_62186095_62186117	3.66142	HIF1A.p2	AK007693|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)
mm9_v1_chr4_-_59562054_59562263	3.66031	HIF1A.p2	BC057641|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	BC006638|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK033732|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	AK088560|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_144904|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)	NM_178164|Rod1|230257|ROD1 regulator of differentiation 1 (S. pombe)
mm9_v1_chr12_+_71926429_71926675	3.65507	HIF1A.p2	BC053929|Frmd6|319710|FERM domain containing 6	NM_028127|Frmd6|319710|FERM domain containing 6	AK054457|Frmd6|319710|FERM domain containing 6
mm9_v1_chr11_-_57982024_57982049	3.64153	HIF1A.p2	NM_001166669|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166670|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166671|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_172558|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr10_-_126338366_126338467	3.63468	HIF1A.p2	BC030630|Xrcc6bp1|68876|XRCC6 binding protein 1	AK004405|Xrcc6bp1|68876|XRCC6 binding protein 1	AK039002|Xrcc6bp1|68876|XRCC6 binding protein 1	AK010471|Xrcc6bp1|68876|XRCC6 binding protein 1	NM_001159559|Xrcc6bp1|68876|XRCC6 binding protein 1	NM_026858|Xrcc6bp1|68876|XRCC6 binding protein 1
mm9_v1_chr12_+_85328810_85328840	3.6305	HIF1A.p2	NM_134188|Acot2|171210|acyl-CoA thioesterase 2	AK172617|Acot2|171210|acyl-CoA thioesterase 2	AK141651|Acot2|171210|acyl-CoA thioesterase 2	BC064469|Acot2|171210|acyl-CoA thioesterase 2
mm9_v1_chr6_-_13627853_13628000	3.61904	HIF1A.p2	BC145708|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	BC145710|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK170526|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK046745|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	NM_175312|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene
mm9_v1_chrX_-_138825032_138825081	3.61199	HIF1A.p2	AK054387|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_001033600|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_019477|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	NM_207625|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr1_-_52557130_52557348	3.59916	HIF1A.p2	U47008|Nab1|17936|Ngfi-A binding protein 1	BC016886|Nab1|17936|Ngfi-A binding protein 1	BC005627|Nab1|17936|Ngfi-A binding protein 1	NM_008667|Nab1|17936|Ngfi-A binding protein 1
mm9_v1_chr5_-_75440586_75440675	3.57652	HIF1A.p2	BC048435|Chic2|74277|cysteine-rich hydrophobic domain 2	AK172289|Chic2|74277|cysteine-rich hydrophobic domain 2	AK006962|Chic2|74277|cysteine-rich hydrophobic domain 2	NM_028850|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr3_-_104621424_104621520	3.55895	HIF1A.p2	AK159295|Mov10|17454|Moloney leukemia virus 10	NM_001163440|Mov10|17454|Moloney leukemia virus 10
mm9_v1_chr16_-_30388534_30388615	3.55172	HIF1A.p2	NM_001128094|Atp13a3|224088|ATPase type 13A3	NM_001128096|Atp13a3|224088|ATPase type 13A3
mm9_v1_chrX_-_91077290_91077385	3.54999	HIF1A.p2	CT010338|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3
mm9_v1_chr9_-_24307580_24307676	3.54791	HIF1A.p2	NM_172920|Dpy19l1|244745|dpy-19-like 1 (C. elegans)
mm9_v1_chr11_-_109334465_109334613	3.53684	HIF1A.p2	AK170472|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	BC017129|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	NM_134038|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chr18_+_52625323_52625373	3.52211	HIF1A.p2	AK012865|Srfbp1|67222|serum response factor binding protein 1	NM_026040|Srfbp1|67222|serum response factor binding protein 1	AK144845|Srfbp1|67222|serum response factor binding protein 1	AK141882|Srfbp1|67222|serum response factor binding protein 1	AK147692|Srfbp1|67222|serum response factor binding protein 1	BC024338|Srfbp1|67222|serum response factor binding protein 1	AY611629|Srfbp1|67222|serum response factor binding protein 1
mm9_v1_chr4_-_62186055_62186086	3.52006	HIF1A.p2	BC034004|Pole3|59001|polymerase (DNA directed), epsilon 3 (p17 subunit)
mm9_v1_chr12_-_70298068_70298133	3.51	HIF1A.p2	AK075648|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK172494|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	EU599049|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK012767|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	BC058344|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene	AK154254|1110034A24Rik|109065|RIKEN cDNA 1110034A24 gene
mm9_v1_chr4_+_15885062_15885148	3.50612	HIF1A.p2	AK132302|Nbn|27354|nibrin	AK134805|Nbn|27354|nibrin	AK134960|Nbn|27354|nibrin	AK159790|Nbn|27354|nibrin	BC013190|Nbn|27354|nibrin	NM_013752|Nbn|27354|nibrin	BC044773|Nbn|27354|nibrin	AF076687|Nbn|27354|nibrin	BC055061|Nbn|27354|nibrin	AK031933|Nbn|27354|nibrin	AF092840|Nbn|27354|nibrin	AK160614|Nbn|27354|nibrin
mm9_v1_chr17_-_23810736_23810750	3.48534	HIF1A.p2	BC085131|Thoc6|386612|THO complex 6 homolog (Drosophila)	NM_001008425|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr4_-_58924786_58924804	3.482	HIF1A.p2	AK038775|AI314180|230249|expressed sequence AI314180	AK043020|AI314180|230249|expressed sequence AI314180
mm9_v1_chr19_-_27504303_27504360	3.47382	HIF1A.p2	AK088081|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK141893|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC145533|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	NM_177474|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK050829|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC016186|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr7_+_107307748_107307807	3.47328	HIF1A.p2	AK011925|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115472|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	NM_026010|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	BC115473|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK008917|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)	AK013127|Lipt2|67164|lipoyl(octanoyl) transferase 2 (putative)
mm9_v1_chr5_-_34979759_34979862	3.46929	HIF1A.p2	BC023012|Mfsd10|68294|major facilitator superfamily domain containing 10	NM_026660|Mfsd10|68294|major facilitator superfamily domain containing 10	AK194736|Mfsd10|68294|major facilitator superfamily domain containing 10	AK018736|Mfsd10|68294|major facilitator superfamily domain containing 10	AK089055|Mfsd10|68294|major facilitator superfamily domain containing 10	BC064775|Mfsd10|68294|major facilitator superfamily domain containing 10
mm9_v1_chr8_-_129469539_129469702	3.46535	HIF1A.p2	AK181461|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	AK185977|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)
mm9_v1_chr2_-_144096253_144096308	3.46259	HIF1A.p2	AK007676|Snx5|69178|sorting nexin 5	AK029463|Snx5|69178|sorting nexin 5	NM_024225|Snx5|69178|sorting nexin 5
mm9_v1_chr6_+_108778633_108778716	3.45971	HIF1A.p2	AK030943|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	NM_138677|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AB042828|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK151668|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK152724|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK129090|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK152979|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK082920|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	BC023237|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1
mm9_v1_chr4_+_118293403_118293498	3.45273	HIF1A.p2	NM_026932|Ebna1bp2|69072|EBNA1 binding protein 2	BC054723|Ebna1bp2|69072|EBNA1 binding protein 2	AK007491|Ebna1bp2|69072|EBNA1 binding protein 2	AK134732|Ebna1bp2|69072|EBNA1 binding protein 2	AK167070|Ebna1bp2|69072|EBNA1 binding protein 2	BC062876|Ebna1bp2|69072|EBNA1 binding protein 2	AK168269|Ebna1bp2|69072|EBNA1 binding protein 2
mm9_v1_chr18_+_32996878_32997001	3.44875	HIF1A.p2	AK156822|Wdr36|225348|WD repeat domain 36	NM_001110015|Wdr36|225348|WD repeat domain 36	NM_001110016|Wdr36|225348|WD repeat domain 36	NM_144863|Wdr36|225348|WD repeat domain 36	AK045396|Wdr36|225348|WD repeat domain 36	BC022132|Wdr36|225348|WD repeat domain 36	BC094453|Wdr36|225348|WD repeat domain 36	AK171683|Wdr36|225348|WD repeat domain 36	AK077545|Wdr36|225348|WD repeat domain 36	AK172377|Wdr36|225348|WD repeat domain 36	AK140019|Wdr36|225348|WD repeat domain 36	AK172054|Wdr36|225348|WD repeat domain 36	AK041763|Wdr36|225348|WD repeat domain 36	BC025809|Wdr36|225348|WD repeat domain 36	AK155965|Wdr36|225348|WD repeat domain 36
mm9_v1_chr17_-_23810808_23810848	3.44185	HIF1A.p2	AK089746|Thoc6|386612|THO complex 6 homolog (Drosophila)	BC089551|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr7_+_144629288_144629354	3.43985	HIF1A.p2	AK167672|Glrx3|30926|glutaredoxin 3	AK010354|Glrx3|30926|glutaredoxin 3	AK017371|Glrx3|30926|glutaredoxin 3	NM_023140|Glrx3|30926|glutaredoxin 3	AF118650|Glrx3|30926|glutaredoxin 3	AK051468|Glrx3|30926|glutaredoxin 3	BC087885|Glrx3|30926|glutaredoxin 3	AK152446|Glrx3|30926|glutaredoxin 3	AK152634|Glrx3|30926|glutaredoxin 3	AK155190|Glrx3|30926|glutaredoxin 3	BC033506|Glrx3|30926|glutaredoxin 3	AK147158|Glrx3|30926|glutaredoxin 3
mm9_v1_chr10_+_69559860_69560052	3.43227	HIF1A.p2	NM_001111121|Ccdc6|76551|coiled-coil domain containing 6
mm9_v1_chr16_+_17233664_17233756	3.42352	HIF1A.p2	AK157276|Hic2|58180|hypermethylated in cancer 2	AK156332|Hic2|58180|hypermethylated in cancer 2	NM_178922|Hic2|58180|hypermethylated in cancer 2	BC065124|Hic2|58180|hypermethylated in cancer 2	AK129266|Hic2|58180|hypermethylated in cancer 2	AK084975|Hic2|58180|hypermethylated in cancer 2
mm9_v1_chr7_-_97129067_97129083	3.41774	HIF1A.p2	AK077664|Eed|13626|embryonic ectoderm development
mm9_v1_chr18_-_52689469_52689476	3.3906	HIF1A.p2	AK166442|Lox|16948|lysyl oxidase
mm9_v1_chr3_+_9250566_9250566	3.38885	HIF1A.p2	NM_177660|Zbtb10|229055|zinc finger and BTB domain containing 10
mm9_v1_chr8_-_59966523_59966681	3.38754	HIF1A.p2	BC132081|Sap30|60406|sin3 associated polypeptide	BC132087|Sap30|60406|sin3 associated polypeptide	AK088745|Sap30|60406|sin3 associated polypeptide	BC037768|Sap30|60406|sin3 associated polypeptide	AF075136|Sap30|60406|sin3 associated polypeptide	AK010928|Sap30|60406|sin3 associated polypeptide	NM_021788|Sap30|60406|sin3 associated polypeptide
mm9_v1_chr10_+_79727708_79727903	3.38241	HIF1A.p2	NM_001122604|Dazap1|70248|DAZ associated protein 1	NM_001122605|Dazap1|70248|DAZ associated protein 1	NM_133188|Dazap1|70248|DAZ associated protein 1	AK152314|Dazap1|70248|DAZ associated protein 1	AK152345|Dazap1|70248|DAZ associated protein 1	BC049355|Dazap1|70248|DAZ associated protein 1	BC058775|Dazap1|70248|DAZ associated protein 1	AF225910|Dazap1|70248|DAZ associated protein 1	AK148023|Dazap1|70248|DAZ associated protein 1
mm9_v1_chr7_+_4691716_4691802	3.37465	HIF1A.p2	AY555193|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	NM_001115018|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	NM_146177|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	AK154848|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	AK137449|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)	BC024816|Suv420h2|232811|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm9_v1_chr17_+_74738475_74738547	3.3692	HIF1A.p2	AK044900|Spast|50850|spastin	AK007793|Spast|50850|spastin
mm9_v1_chr15_+_79178063_79178107	3.36868	HIF1A.p2	BC022952|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)	NM_010755|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr6_-_85401198_85401297	3.36577	HIF1A.p2	BC115452|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	AK006658|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_001163427|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_028505|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene
mm9_v1_chr5_+_77694506_77694565	3.34224	HIF1A.p2	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr8_-_36558514_36558598	3.33999	HIF1A.p2	AK165026|Eri1|67276|exoribonuclease 1	BC046412|Eri1|67276|exoribonuclease 1	AK172005|Eri1|67276|exoribonuclease 1	AK144223|Eri1|67276|exoribonuclease 1	AK014041|Eri1|67276|exoribonuclease 1	AK014410|Eri1|67276|exoribonuclease 1	NM_026067|Eri1|67276|exoribonuclease 1
mm9_v1_chr16_-_11254052_11254466	3.32747	HIF1A.p2	BC031640|Gspt1|14852|G1 to S phase transition 1	AK030760|Gspt1|14852|G1 to S phase transition 1	AK032059|Gspt1|14852|G1 to S phase transition 1	AK148603|Gspt1|14852|G1 to S phase transition 1	AK134128|Gspt1|14852|G1 to S phase transition 1	AK037929|Gspt1|14852|G1 to S phase transition 1	AK166626|Gspt1|14852|G1 to S phase transition 1	NM_001130008|Gspt1|14852|G1 to S phase transition 1	NM_146066|Gspt1|14852|G1 to S phase transition 1
mm9_v1_chr18_-_42110847_42110895	3.31898	HIF1A.p2	BC119251|Prelid2|77619|PRELI domain containing 2	BC120711|Prelid2|77619|PRELI domain containing 2	BC145035|Prelid2|77619|PRELI domain containing 2	NM_029942|Prelid2|77619|PRELI domain containing 2	AK021193|Prelid2|77619|PRELI domain containing 2
mm9_v1_chr19_+_11986887_11986895	3.30267	HIF1A.p2	AK150301|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK170918|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	NM_172635|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK154102|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)
mm9_v1_chr1_-_123464468_123464558	3.29006	HIF1A.p2	AK075864|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC017160|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK019845|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC103776|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC141230|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC141231|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK012878|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	BC028246|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	AK012706|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	NM_025860|Ddx18|66942|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
mm9_v1_chr2_-_154718506_154718641	3.26618	HIF1A.p2	BC113766|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	BC003848|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK019156|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK143553|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK166862|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK145401|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK012338|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	BC100539|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK076056|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK011503|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK042004|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK166866|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	AK145434|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)	NM_026030|Eif2s2|67204|eukaryotic translation initiation factor 2, subunit 2 (beta)
mm9_v1_chr3_+_41368801_41368825	3.25958	HIF1A.p2	NM_001130186|Phf17|269424|PHD finger protein 17
mm9_v1_chr13_+_34254902_34254947	3.25303	HIF1A.p2	AK009887|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4
mm9_v1_chr11_+_78002569_78002838	3.25167	HIF1A.p2	BC038638|Rab34|19376|RAB34, member of RAS oncogene family	AB232630|Rab34|19376|RAB34, member of RAS oncogene family	AF322068|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr16_+_16213397_16213405	3.23901	HIF1A.p2	AK005020|Pkp2|67451|plakophilin 2
mm9_v1_chr3_+_32607582_32607695	3.22068	HIF1A.p2	AF041476|Actl6a|56456|actin-like 6A	AK169278|Actl6a|56456|actin-like 6A	AK090154|Actl6a|56456|actin-like 6A	AK167905|Actl6a|56456|actin-like 6A	BC094498|Actl6a|56456|actin-like 6A	AK002724|Actl6a|56456|actin-like 6A	BC001994|Actl6a|56456|actin-like 6A
mm9_v1_chr5_+_45884612_45884734	3.21006	HIF1A.p2	BC016536|Lap3|66988|leucine aminopeptidase 3	NM_024434|Lap3|66988|leucine aminopeptidase 3	AK089023|Lap3|66988|leucine aminopeptidase 3	AF334160|Lap3|66988|leucine aminopeptidase 3	AK010502|Lap3|66988|leucine aminopeptidase 3	AK002819|Lap3|66988|leucine aminopeptidase 3	CT010237|Lap3|66988|leucine aminopeptidase 3	CT010301|Lap3|66988|leucine aminopeptidase 3	AK005334|Lap3|66988|leucine aminopeptidase 3	AK010384|Lap3|66988|leucine aminopeptidase 3	AK011604|Lap3|66988|leucine aminopeptidase 3	AK169032|Lap3|66988|leucine aminopeptidase 3	AK008600|Lap3|66988|leucine aminopeptidase 3	AK166958|Lap3|66988|leucine aminopeptidase 3
mm9_v1_chr3_+_21975544_21975859	3.18646	HIF1A.p2	AK036064|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1	NM_030732|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1	AK033347|Tbl1xr1|81004|transducin (beta)-like 1X-linked receptor 1
mm9_v1_chr3_-_100914081_100914100	3.17559	HIF1A.p2	AF152344|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	NM_011197|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	BC145713|Ptgfrn|19221|prostaglandin F2 receptor negative regulator	BC145715|Ptgfrn|19221|prostaglandin F2 receptor negative regulator
mm9_v1_chr3_+_104442568_104442606	3.17375	HIF1A.p2	AK033516|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK079379|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK088762|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK161701|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK162682|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AK166606|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	NM_009196|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	BC014777|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1	AF058055|Slc16a1|20501|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm9_v1_chr15_+_34425046_34425096	3.16559	HIF1A.p2	NM_026340|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	NM_152894|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	AK016547|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	BC034742|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	AK018297|Pop1|67724|processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
mm9_v1_chr8_-_72498210_72498309	3.16204	HIF1A.p2	NM_001113346|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr19_+_55328356_55328506	3.15668	HIF1A.p2	AK151378|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	BC031544|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK161024|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr13_+_50513207_50513274	3.14855	HIF1A.p2	AK135553|Fbxw17|109082|F-box and WD-40 domain protein 17	BC040428|Fbxw17|109082|F-box and WD-40 domain protein 17	NM_175401|Fbxw17|109082|F-box and WD-40 domain protein 17	AK155157|Fbxw17|109082|F-box and WD-40 domain protein 17
mm9_v1_chr11_-_70796432_70796469	3.1439	HIF1A.p2	AK010601|C1qbp|12261|complement component 1, q subcomponent binding protein	AF300619|C1qbp|12261|complement component 1, q subcomponent binding protein	AJ001101|C1qbp|12261|complement component 1, q subcomponent binding protein
mm9_v1_chr2_-_160191800_160191946	3.1401	HIF1A.p2	AK131926|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm9_v1_chr11_+_118884275_118884425	3.127	HIF1A.p2	X62537|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	BC035199|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	NM_007623|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	AK157869|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	Y13274|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)
mm9_v1_chr19_+_45080961_45081073	3.12484	HIF1A.p2	BC071195|Peo1|226153|progressive external ophthalmoplegia 1 (human)	NM_153796|Peo1|226153|progressive external ophthalmoplegia 1 (human)
mm9_v1_chr3_+_105762425_105762460	3.12159	HIF1A.p2	AK012014|Wdr77|70465|WD repeat domain 77	AK161812|Wdr77|70465|WD repeat domain 77	BC005755|Wdr77|70465|WD repeat domain 77
mm9_v1_chr12_-_103213890_103213953	3.12075	HIF1A.p2	AK156663|Gm2701|100040305|predicted gene 2701
mm9_v1_chr15_+_76199307_76199353	3.11674	HIF1A.p2	AB041552|Fam203a|59053|family with sequence similarity 203, member A	NM_021555|Fam203a|59053|family with sequence similarity 203, member A	AK085815|Fam203a|59053|family with sequence similarity 203, member A
mm9_v1_chr13_-_101545800_101545853	3.11633	HIF1A.p2	AK012907|Cenph|26886|centromere protein H	BC025084|Cenph|26886|centromere protein H	AK011264|Cenph|26886|centromere protein H	AK011739|Cenph|26886|centromere protein H	AK006208|Cenph|26886|centromere protein H	AK011738|Cenph|26886|centromere protein H	AK010533|Cenph|26886|centromere protein H	AB017634|Cenph|26886|centromere protein H	NM_021886|Cenph|26886|centromere protein H
mm9_v1_chr14_+_22319075_22319102	3.10702	HIF1A.p2	AK052307|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	NM_017479|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4	AF222800|Myst4|54169|MYST histone acetyltransferase monocytic leukemia 4
mm9_v1_chr11_-_72225084_72225217	3.10697	HIF1A.p2	AK085988|Smtnl2|276829|smoothelin-like 2	BC037993|Smtnl2|276829|smoothelin-like 2	AK051585|Smtnl2|276829|smoothelin-like 2	NM_177776|Smtnl2|276829|smoothelin-like 2
mm9_v1_chr6_+_71781393_71781440	3.10682	HIF1A.p2	AK033126|Immt|76614|inner membrane protein, mitochondrial	AK163491|Immt|76614|inner membrane protein, mitochondrial	AK169365|Immt|76614|inner membrane protein, mitochondrial	AK201051|Immt|76614|inner membrane protein, mitochondrial
mm9_v1_chr5_+_123465326_123465341	3.09469	HIF1A.p2	AK085755|Orai1|109305|ORAI calcium release-activated calcium modulator 1
mm9_v1_chr9_+_35366065_35366179	3.0937	HIF1A.p2	AK030639|Pus3|67049|pseudouridine synthase 3
mm9_v1_chr7_-_52722144_52722269	3.06622	HIF1A.p2	AY095934|Bax|12028|BCL2-associated X protein	L22472|Bax|12028|BCL2-associated X protein	AK149994|Bax|12028|BCL2-associated X protein	AK013298|Bax|12028|BCL2-associated X protein	BC053380|Bax|12028|BCL2-associated X protein	BC018228|Bax|12028|BCL2-associated X protein	AK159233|Bax|12028|BCL2-associated X protein	NM_007527|Bax|12028|BCL2-associated X protein
mm9_v1_chr14_+_56364564_56364843	3.0522	HIF1A.p2	AK146020|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK139689|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK083861|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK015585|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK219900|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr15_+_82171608_82171644	3.04601	HIF1A.p2	NM_177391|Fam109b|338368|family with sequence similarity 109, member B	AK083325|Fam109b|338368|family with sequence similarity 109, member B
mm9_v1_chrX_-_106208659_106208718	3.03435	HIF1A.p2	BC021626|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AB018374|Hmgn5|50887|high-mobility group nucleosome binding domain 5	BC083087|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK131996|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK146755|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AF213454|Hmgn5|50887|high-mobility group nucleosome binding domain 5	NM_016710|Hmgn5|50887|high-mobility group nucleosome binding domain 5
mm9_v1_chr2_-_103601232_103601426	3.01875	HIF1A.p2	AK149825|Nat10|98956|N-acetyltransferase 10	AK036294|Nat10|98956|N-acetyltransferase 10	AK048552|Nat10|98956|N-acetyltransferase 10	AK040070|Nat10|98956|N-acetyltransferase 10	AK087445|Nat10|98956|N-acetyltransferase 10	BC034516|Nat10|98956|N-acetyltransferase 10	NM_153126|Nat10|98956|N-acetyltransferase 10	AK142682|Nat10|98956|N-acetyltransferase 10	AK054029|Nat10|98956|N-acetyltransferase 10
mm9_v1_chr5_-_124804365_124804457	3.01522	HIF1A.p2	AF011644|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr5_+_93522440_93522507	3.00668	HIF1A.p2	AK166517|Sept11|52398|septin 11	AK171368|Sept11|52398|septin 11	BC064466|Sept11|52398|septin 11	NM_001009818|Sept11|52398|septin 11
mm9_v1_chr14_+_77436555_77436670	3.00498	HIF1A.p2	AK077161|Ccdc122|108811|coiled-coil domain containing 122	NM_175369|Ccdc122|108811|coiled-coil domain containing 122	BC096577|Ccdc122|108811|coiled-coil domain containing 122	BC138881|Ccdc122|108811|coiled-coil domain containing 122	BC138883|Ccdc122|108811|coiled-coil domain containing 122	BC145455|Ccdc122|108811|coiled-coil domain containing 122
mm9_v1_chr5_-_138227888_138227970	3.00352	HIF1A.p2	AK154415|Mepce|231803|methylphosphate capping enzyme	NM_144913|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr19_+_25685026_25685032	2.99947	HIF1A.p2	AF541936|Dmrt3|240590|doublesex and mab-3 related transcription factor 3	NM_177360|Dmrt3|240590|doublesex and mab-3 related transcription factor 3	BC052041|Dmrt3|240590|doublesex and mab-3 related transcription factor 3
mm9_v1_chr8_-_109948891_109948958	2.99816	HIF1A.p2	BC054835|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK054034|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK075755|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC117992|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC117993|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	NM_026277|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC034900|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK021194|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	BC103793|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	AK165521|Nob1|67619|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
mm9_v1_chr19_-_44144244_44144286	2.95642	HIF1A.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr11_-_115353104_115353170	2.95278	HIF1A.p2	AF078840|Nt5c|50773|5',3'-nucleotidase, cytosolic	NM_015807|Nt5c|50773|5',3'-nucleotidase, cytosolic	BC024368|Nt5c|50773|5',3'-nucleotidase, cytosolic	AK007418|Nt5c|50773|5',3'-nucleotidase, cytosolic
mm9_v1_chr17_-_31992708_31992780	2.94997	HIF1A.p2	U11494|Sik1|17691|salt inducible kinase 1	AK141817|Sik1|17691|salt inducible kinase 1	NM_010831|Sik1|17691|salt inducible kinase 1	AK172427|Sik1|17691|salt inducible kinase 1
mm9_v1_chr13_-_53076251_53076471	2.94651	HIF1A.p2	BC031377|Nfil3|18030|nuclear factor, interleukin 3, regulated	AK087541|Nfil3|18030|nuclear factor, interleukin 3, regulated	NM_017373|Nfil3|18030|nuclear factor, interleukin 3, regulated
mm9_v1_chr4_+_118100682_118100801	2.94615	HIF1A.p2	NM_001039175|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	NM_019422|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK156003|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK171217|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK135348|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	BC096673|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK003743|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
mm9_v1_chr9_+_123387818_123387943	2.94446	HIF1A.p2	NM_013860|Limd1|29806|LIM domains containing 1	AJ132409|Limd1|29806|LIM domains containing 1	AK047198|Limd1|29806|LIM domains containing 1	BC023371|Limd1|29806|LIM domains containing 1	AK083970|Limd1|29806|LIM domains containing 1	BC056449|Limd1|29806|LIM domains containing 1
mm9_v1_chr7_+_20162604_20162709	2.9423	HIF1A.p2	NM_022409|Zfp296|63872|zinc finger protein 296	AK008748|Zfp296|63872|zinc finger protein 296	BC099454|Zfp296|63872|zinc finger protein 296
mm9_v1_chr10_-_60610238_60610394	2.91801	HIF1A.p2	AK036747|Sgpl1|20397|sphingosine phosphate lyase 1	AK150053|Sgpl1|20397|sphingosine phosphate lyase 1	AK173137|Sgpl1|20397|sphingosine phosphate lyase 1	AF036894|Sgpl1|20397|sphingosine phosphate lyase 1	BC026135|Sgpl1|20397|sphingosine phosphate lyase 1	AK037789|Sgpl1|20397|sphingosine phosphate lyase 1	AK043024|Sgpl1|20397|sphingosine phosphate lyase 1	AK049342|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr8_-_24348082_24348154	2.91375	HIF1A.p2	BC002156|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)	AK076104|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)	NM_024240|Gins4|109145|GINS complex subunit 4 (Sld5 homolog)
mm9_v1_chrX_-_138824941_138824974	2.91181	HIF1A.p2	BC016416|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr3_-_129534201_129534313	2.91058	HIF1A.p2	BC021873|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	BC048685|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	NM_026578|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr2_+_167363769_167363826	2.90358	HIF1A.p2	X67253|Snai1|20613|snail homolog 1 (Drosophila)	M95604|Snai1|20613|snail homolog 1 (Drosophila)	CT010204|Snai1|20613|snail homolog 1 (Drosophila)	CT010370|Snai1|20613|snail homolog 1 (Drosophila)
mm9_v1_chr4_-_12098948_12098955	2.89385	HIF1A.p2	BC020162|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr5_-_139936486_139936511	2.8778	HIF1A.p2	NM_028469|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chr16_+_20498889_20499013	2.86991	HIF1A.p2	AK145801|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	NM_172265|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	BC038620|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	BC027268|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	AK160985|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon	BC085255|Eif2b5|224045|eukaryotic translation initiation factor 2B, subunit 5 epsilon
mm9_v1_chr3_+_105762363_105762420	2.86605	HIF1A.p2	AK078856|Wdr77|70465|WD repeat domain 77	AK048488|Wdr77|70465|WD repeat domain 77	AK168752|Wdr77|70465|WD repeat domain 77	AK050391|Wdr77|70465|WD repeat domain 77	AK168006|Wdr77|70465|WD repeat domain 77	NM_027432|Wdr77|70465|WD repeat domain 77	AK169128|Wdr77|70465|WD repeat domain 77	AK163839|Wdr77|70465|WD repeat domain 77
mm9_v1_chr11_-_90548862_90548939	2.86552	HIF1A.p2	AK181527|Tom1l1|71943|target of myb1-like 1 (chicken)	AJ505007|Tom1l1|71943|target of myb1-like 1 (chicken)	AK009826|Tom1l1|71943|target of myb1-like 1 (chicken)	AK083630|Tom1l1|71943|target of myb1-like 1 (chicken)	AF395837|Tom1l1|71943|target of myb1-like 1 (chicken)	AK033712|Tom1l1|71943|target of myb1-like 1 (chicken)	NM_028011|Tom1l1|71943|target of myb1-like 1 (chicken)
mm9_v1_chr19_-_6057706_6057798	2.859	HIF1A.p2	AK210880|Mrpl49|18120|mitochondrial ribosomal protein L49	BC028956|Mrpl49|18120|mitochondrial ribosomal protein L49	AK007712|Mrpl49|18120|mitochondrial ribosomal protein L49	AK014723|Mrpl49|18120|mitochondrial ribosomal protein L49	AK027949|Mrpl49|18120|mitochondrial ribosomal protein L49	AK049794|Mrpl49|18120|mitochondrial ribosomal protein L49	AK077397|Mrpl49|18120|mitochondrial ribosomal protein L49	NM_026246|Mrpl49|18120|mitochondrial ribosomal protein L49	AK003040|Mrpl49|18120|mitochondrial ribosomal protein L49	AK150572|Mrpl49|18120|mitochondrial ribosomal protein L49	AK150715|Mrpl49|18120|mitochondrial ribosomal protein L49	AK011273|Mrpl49|18120|mitochondrial ribosomal protein L49
mm9_v1_chr15_+_76199357_76199385	2.85877	HIF1A.p2	BC061251|Fam203a|59053|family with sequence similarity 203, member A
mm9_v1_chr19_+_3708309_3708410	2.85216	HIF1A.p2	AK007868|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene	NM_028077|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene	AK154828|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene	BC019471|1810055G02Rik|72056|RIKEN cDNA 1810055G02 gene
mm9_v1_chr7_-_97129012_97129054	2.85108	HIF1A.p2	AK133890|Eed|13626|embryonic ectoderm development	AK087924|Eed|13626|embryonic ectoderm development	AK131976|Eed|13626|embryonic ectoderm development
mm9_v1_chr19_+_8894752_8894803	2.84681	HIF1A.p2	AK032708|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2	DQ000354|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chr2_+_72314235_72314311	2.84262	HIF1A.p2	AK028671|Cdca7|66953|cell division cycle associated 7	BC066169|Cdca7|66953|cell division cycle associated 7	AK011289|Cdca7|66953|cell division cycle associated 7	AK167734|Cdca7|66953|cell division cycle associated 7	NM_025866|Cdca7|66953|cell division cycle associated 7	AK153943|Cdca7|66953|cell division cycle associated 7	AK075882|Cdca7|66953|cell division cycle associated 7
mm9_v1_chr14_-_77436363_77436492	2.83416	HIF1A.p2	AK152154|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene	AK033565|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene	NM_172488|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene	AK153349|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene
mm9_v1_chr18_+_50212935_50213173	2.83138	HIF1A.p2	NM_134131|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK087478|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK090350|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK090316|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK150965|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK149901|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK150445|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK151622|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	AK152426|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8	BC009090|Tnfaip8|106869|tumor necrosis factor, alpha-induced protein 8
mm9_v1_chr5_+_140267449_140267530	2.82924	HIF1A.p2	AK143654|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	AK143717|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	NM_010757|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	D42124|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	AK153856|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	BC014295|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
mm9_v1_chr6_-_52141697_52141712	2.82924	HIF1A.p2	AK076098|Hoxa4|15401|homeobox A4	BC107172|Hoxa4|15401|homeobox A4	NM_008265|Hoxa4|15401|homeobox A4
mm9_v1_chr6_-_91066809_91066837	2.82696	HIF1A.p2	AK157272|Nup210|54563|nucleoporin 210	BC052468|Nup210|54563|nucleoporin 210	AK053417|Nup210|54563|nucleoporin 210	NM_018815|Nup210|54563|nucleoporin 210
mm9_v1_chr16_+_20672854_20672888	2.82195	HIF1A.p2	AK053144|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK142399|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK133903|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK139371|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK162698|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066038|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr19_+_36484237_36484340	2.8214	HIF1A.p2	AK146133|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr19_-_17431079_17431156	2.81804	HIF1A.p2	BC039126|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK199888|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK045216|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK167048|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	D87333|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	NM_173442|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr13_-_38620307_38620383	2.81764	HIF1A.p2	AK224952|Txndc5|105245|thioredoxin domain containing 5	AK224967|Txndc5|105245|thioredoxin domain containing 5	AY243534|Txndc5|105245|thioredoxin domain containing 5	AK169680|Txndc5|105245|thioredoxin domain containing 5	AK224923|Txndc5|105245|thioredoxin domain containing 5	AK225005|Txndc5|105245|thioredoxin domain containing 5	AK225014|Txndc5|105245|thioredoxin domain containing 5	BC016252|Txndc5|105245|thioredoxin domain containing 5	AK224999|Txndc5|105245|thioredoxin domain containing 5	AK224976|Txndc5|105245|thioredoxin domain containing 5	AK224965|Txndc5|105245|thioredoxin domain containing 5	AK224966|Txndc5|105245|thioredoxin domain containing 5	AK224979|Txndc5|105245|thioredoxin domain containing 5	AK224988|Txndc5|105245|thioredoxin domain containing 5	AK224947|Txndc5|105245|thioredoxin domain containing 5	AK224924|Txndc5|105245|thioredoxin domain containing 5	NM_145367|Txndc5|105245|thioredoxin domain containing 5	AK224939|Txndc5|105245|thioredoxin domain containing 5	AK224991|Txndc5|105245|thioredoxin domain containing 5	AK224992|Txndc5|105245|thioredoxin domain containing 5	AK224993|Txndc5|105245|thioredoxin domain containing 5	AK150781|Txndc5|105245|thioredoxin domain containing 5	AK224978|Txndc5|105245|thioredoxin domain containing 5	AK224938|Txndc5|105245|thioredoxin domain containing 5	AK224945|Txndc5|105245|thioredoxin domain containing 5	AK224977|Txndc5|105245|thioredoxin domain containing 5	AK224983|Txndc5|105245|thioredoxin domain containing 5	AK224990|Txndc5|105245|thioredoxin domain containing 5	AK142049|Txndc5|105245|thioredoxin domain containing 5	AK224946|Txndc5|105245|thioredoxin domain containing 5	AK224913|Txndc5|105245|thioredoxin domain containing 5	AK224972|Txndc5|105245|thioredoxin domain containing 5	AK224937|Txndc5|105245|thioredoxin domain containing 5	AK224989|Txndc5|105245|thioredoxin domain containing 5	AK224994|Txndc5|105245|thioredoxin domain containing 5	AK225004|Txndc5|105245|thioredoxin domain containing 5	AK225007|Txndc5|105245|thioredoxin domain containing 5	AK225010|Txndc5|105245|thioredoxin domain containing 5	AK225011|Txndc5|105245|thioredoxin domain containing 5	AK224934|Txndc5|105245|thioredoxin domain containing 5	AK224936|Txndc5|105245|thioredoxin domain containing 5	AK224951|Txndc5|105245|thioredoxin domain containing 5	AK224960|Txndc5|105245|thioredoxin domain containing 5	AK224982|Txndc5|105245|thioredoxin domain containing 5	AK225001|Txndc5|105245|thioredoxin domain containing 5	AK224927|Txndc5|105245|thioredoxin domain containing 5	AK224963|Txndc5|105245|thioredoxin domain containing 5	AK224964|Txndc5|105245|thioredoxin domain containing 5	AK224971|Txndc5|105245|thioredoxin domain containing 5	AK224986|Txndc5|105245|thioredoxin domain containing 5	AK225023|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr9_+_107456969_107456986	2.81595	HIF1A.p2	BC002173|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1	NM_019713|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1
mm9_v1_chr11_+_53914425_53914544	2.81519	HIF1A.p2	NM_001136076|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	NM_011031|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK053504|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK142624|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK144124|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	AK145535|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	BC018411|P4ha2|18452|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
mm9_v1_chr3_+_135101664_135101764	2.81077	HIF1A.p2	AK153111|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152231|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153410|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167801|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK151594|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK032885|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167077|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK090099|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC098220|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC024351|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK004001|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK049906|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	NM_025356|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK167650|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159546|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK152541|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159963|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	BC057941|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK088448|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr11_-_40568524_40568688	2.80421	HIF1A.p2	AK136645|Ccng1|12450|cyclin G1	BC006609|Ccng1|12450|cyclin G1
mm9_v1_chr7_-_52689833_52689978	2.80205	HIF1A.p2	AK159112|Ruvbl2|20174|RuvB-like protein 2	NM_011304|Ruvbl2|20174|RuvB-like protein 2
mm9_v1_chr4_+_46463917_46464167	2.79957	HIF1A.p2	AK165807|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC003489|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC005628|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	NM_130889|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	BC093506|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	AK136648|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	AB025582|Anp32b|67628|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
mm9_v1_chr9_+_30838224_30838249	2.78902	HIF1A.p2	AK036895|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_001115130|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_172765|Zbtb44|235132|zinc finger and BTB domain containing 44
mm9_v1_chr1_-_120950111_120950195	2.78183	HIF1A.p2	BC085190|Gli2|14633|GLI-Kruppel family member GLI2	BC082604|Gli2|14633|GLI-Kruppel family member GLI2	NM_001081125|Gli2|14633|GLI-Kruppel family member GLI2
mm9_v1_chr16_+_14163414_14163441	2.77986	HIF1A.p2	AK012861|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK037289|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK012830|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK146982|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)	AK169743|Nde1|67203|nuclear distribution gene E homolog 1 (A nidulans)
mm9_v1_chr6_+_116288073_116288073	2.76187	HIF1A.p2	AK165647|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr2_+_84679564_84679595	2.76167	HIF1A.p2	NM_001081349|Slc43a1|72401|solute carrier family 43, member 1	AK011417|Slc43a1|72401|solute carrier family 43, member 1	AK046758|Slc43a1|72401|solute carrier family 43, member 1	AK165374|Slc43a1|72401|solute carrier family 43, member 1	AB103034|Slc43a1|72401|solute carrier family 43, member 1
mm9_v1_chr5_-_135539929_135539990	2.75978	HIF1A.p2	BC093484|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AF412035|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK003386|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK011005|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK151986|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	NM_025375|Wbscr22|66138|Williams Beuren syndrome chromosome region 22
mm9_v1_chr2_-_28771940_28771959	2.75742	HIF1A.p2	NM_019446|Barhl1|54422|BarH-like 1 (Drosophila)	AB043980|Barhl1|54422|BarH-like 1 (Drosophila)	BC055731|Barhl1|54422|BarH-like 1 (Drosophila)	NM_001164186|Barhl1|54422|BarH-like 1 (Drosophila)
mm9_v1_chr11_+_102051080_102051165	2.75384	HIF1A.p2	AK165395|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	AY186239|G6pc3|68401|glucose 6 phosphatase, catalytic, 3
mm9_v1_chr19_+_46130978_46131205	2.75205	HIF1A.p2	NM_001081214|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK147947|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK044522|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK122322|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	BC066048|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK180476|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm9_v1_chr13_+_74777303_74777332	2.74712	HIF1A.p2	BC046610|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK159406|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK030329|Erap1|80898|endoplasmic reticulum aminopeptidase 1	NM_030711|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK029841|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK036559|Erap1|80898|endoplasmic reticulum aminopeptidase 1
mm9_v1_chr13_+_49282844_49282955	2.74382	HIF1A.p2	AK159111|Ninj1|18081|ninjurin 1	AK077602|Ninj1|18081|ninjurin 1	AK171973|Ninj1|18081|ninjurin 1	AK160045|Ninj1|18081|ninjurin 1	AK155741|Ninj1|18081|ninjurin 1	BC118937|Ninj1|18081|ninjurin 1	NM_013610|Ninj1|18081|ninjurin 1	U91513|Ninj1|18081|ninjurin 1	BC049600|Ninj1|18081|ninjurin 1
mm9_v1_chr2_-_144096518_144096579	2.73693	HIF1A.p2	AK031873|Snx5|69178|sorting nexin 5	AK144710|Snx5|69178|sorting nexin 5	AK169545|Snx5|69178|sorting nexin 5	AK049129|Snx5|69178|sorting nexin 5	AK078776|Snx5|69178|sorting nexin 5	AK169786|Snx5|69178|sorting nexin 5	AK088223|Snx5|69178|sorting nexin 5	AK152311|Snx5|69178|sorting nexin 5
mm9_v1_chr8_-_87956606_87956658	2.73156	HIF1A.p2	AK007050|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	AK013123|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene	BC040087|4921524J17Rik|66714|RIKEN cDNA 4921524J17 gene
mm9_v1_chr2_+_28323580_28323619	2.73009	HIF1A.p2	AK051184|Mrps2|118451|mitochondrial ribosomal protein S2	AK172120|Mrps2|118451|mitochondrial ribosomal protein S2	NM_001166031|Mrps2|118451|mitochondrial ribosomal protein S2	NM_080452|Mrps2|118451|mitochondrial ribosomal protein S2	AK154131|Mrps2|118451|mitochondrial ribosomal protein S2	AB055389|Mrps2|118451|mitochondrial ribosomal protein S2	AK160129|Mrps2|118451|mitochondrial ribosomal protein S2	AK165956|Mrps2|118451|mitochondrial ribosomal protein S2	AK156412|Mrps2|118451|mitochondrial ribosomal protein S2	AK171699|Mrps2|118451|mitochondrial ribosomal protein S2	AK172432|Mrps2|118451|mitochondrial ribosomal protein S2	BC048377|Mrps2|118451|mitochondrial ribosomal protein S2	BC033460|Mrps2|118451|mitochondrial ribosomal protein S2	BC060503|Mrps2|118451|mitochondrial ribosomal protein S2
mm9_v1_chr5_+_137462888_137462891	2.7287	HIF1A.p2	BC054734|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	NM_011962|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	BC043047|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr9_-_88376937_88377419	2.72087	HIF1A.p2	BC080309|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC108363|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK083398|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK077588|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC050079|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC055863|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK076026|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AB035725|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	AK034845|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC041148|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	BC058807|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019666|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_019796|Syncrip|56403|synaptotagmin binding, cytoplasmic RNA interacting protein
mm9_v1_chr3_+_41368846_41368849	2.71983	HIF1A.p2	AK129445|Phf17|269424|PHD finger protein 17
mm9_v1_chr1_+_55144949_55145013	2.70825	HIF1A.p2	NM_008303|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr8_-_127386864_127387004	2.70455	HIF1A.p2	AK166963|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK011944|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK165402|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK017273|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK012675|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK143919|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	AK166668|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	NM_025615|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene	BC023675|2810004N23Rik|66523|RIKEN cDNA 2810004N23 gene
mm9_v1_chr13_-_32430412_32430498	2.69936	HIF1A.p2	BC031788|Gmds|218138|GDP-mannose 4, 6-dehydratase	NM_146041|Gmds|218138|GDP-mannose 4, 6-dehydratase	BC093502|Gmds|218138|GDP-mannose 4, 6-dehydratase	AK086076|Gmds|218138|GDP-mannose 4, 6-dehydratase
mm9_v1_chr3_-_75760843_75760893	2.68201	HIF1A.p2	AK080456|Golim4|73124|golgi integral membrane protein 4	AK033730|Golim4|73124|golgi integral membrane protein 4	AK048434|Golim4|73124|golgi integral membrane protein 4	AK078928|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr7_+_128177958_128178339	2.67777	HIF1A.p2	AJ278576|Mettl9|59052|methyltransferase like 9	NM_021554|Mettl9|59052|methyltransferase like 9	BC068124|Mettl9|59052|methyltransferase like 9	AB041664|Mettl9|59052|methyltransferase like 9	AK075586|Mettl9|59052|methyltransferase like 9
mm9_v1_chr6_+_71781292_71781391	2.67252	HIF1A.p2	AK038129|Immt|76614|inner membrane protein, mitochondrial	NM_029673|Immt|76614|inner membrane protein, mitochondrial	AK146640|Immt|76614|inner membrane protein, mitochondrial	AK159909|Immt|76614|inner membrane protein, mitochondrial	AK049189|Immt|76614|inner membrane protein, mitochondrial	AK152588|Immt|76614|inner membrane protein, mitochondrial	AK030841|Immt|76614|inner membrane protein, mitochondrial	AK157805|Immt|76614|inner membrane protein, mitochondrial
mm9_v1_chr15_+_79178408_79178527	2.67193	HIF1A.p2	AK145835|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr5_-_4104331_4104507	2.67109	HIF1A.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr15_-_83386114_83386196	2.66599	HIF1A.p2	BC099494|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)	NM_001030014|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)	AK135457|Mcat|223722|malonyl CoA:ACP acyltransferase (mitochondrial)
mm9_v1_chr6_-_125263750_125263903	2.66053	HIF1A.p2	BC138590|Ltbr|17000|lymphotoxin B receptor	BC138591|Ltbr|17000|lymphotoxin B receptor	AK146127|Ltbr|17000|lymphotoxin B receptor	L38423|Ltbr|17000|lymphotoxin B receptor	U29173|Ltbr|17000|lymphotoxin B receptor	NM_010736|Ltbr|17000|lymphotoxin B receptor
mm9_v1_chr18_-_52688607_52688694	2.65198	HIF1A.p2	AK135213|Lox|16948|lysyl oxidase
mm9_v1_chr11_-_109334909_109334911	2.65115	HIF1A.p2	NM_001029842|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	AK032026|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chrX_-_159267249_159267385	2.6349	HIF1A.p2	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr3_-_104621364_104621417	2.6331	HIF1A.p2	AK169206|Mov10|17454|Moloney leukemia virus 10
mm9_v1_chr15_-_75739695_75739776	2.62943	HIF1A.p2	BC082536|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	BC079855|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	BC013059|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK017616|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK044934|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK054335|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AF304351|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK017796|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	AK010347|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	NM_023240|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	NM_029663|Eef1d|66656|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
mm9_v1_chr10_+_127814144_127814228	2.62938	HIF1A.p2	AK144017|Ankrd52|237615|ankyrin repeat domain 52	AK032429|Ankrd52|237615|ankyrin repeat domain 52	NM_172790|Ankrd52|237615|ankyrin repeat domain 52	AK090124|Ankrd52|237615|ankyrin repeat domain 52	AK035533|Ankrd52|237615|ankyrin repeat domain 52	BC117907|Ankrd52|237615|ankyrin repeat domain 52	BC117908|Ankrd52|237615|ankyrin repeat domain 52
mm9_v1_chr11_-_40568710_40568789	2.62078	HIF1A.p2	AK167486|Ccng1|12450|cyclin G1	AK159429|Ccng1|12450|cyclin G1	AK153392|Ccng1|12450|cyclin G1	AK167052|Ccng1|12450|cyclin G1	AK159831|Ccng1|12450|cyclin G1	L49507|Ccng1|12450|cyclin G1	Z37110|Ccng1|12450|cyclin G1	AK160411|Ccng1|12450|cyclin G1	AK128957|Ccng1|12450|cyclin G1	AK147026|Ccng1|12450|cyclin G1	AK170397|Ccng1|12450|cyclin G1	AK143114|Ccng1|12450|cyclin G1	NM_009831|Ccng1|12450|cyclin G1
mm9_v1_chr9_+_107471447_107471514	2.62028	HIF1A.p2	AK133886|Hyal2|15587|hyaluronoglucosaminidase 2	AK088806|Hyal2|15587|hyaluronoglucosaminidase 2	AJ000059|Hyal2|15587|hyaluronoglucosaminidase 2	AK087358|Hyal2|15587|hyaluronoglucosaminidase 2	AF302843|Hyal2|15587|hyaluronoglucosaminidase 2	AF422177|Hyal2|15587|hyaluronoglucosaminidase 2	NM_010489|Hyal2|15587|hyaluronoglucosaminidase 2	AF302844|Hyal2|15587|hyaluronoglucosaminidase 2
mm9_v1_chr2_+_153567020_153567113	2.61874	HIF1A.p2	NM_007896|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC043333|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK154245|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK013626|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	U51196|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK146206|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC052728|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC064444|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr15_-_10644312_10644406	2.61503	HIF1A.p2	AK045733|Rai14|75646|retinoic acid induced 14	AK129333|Rai14|75646|retinoic acid induced 14	AK090343|Rai14|75646|retinoic acid induced 14	NM_001166408|Rai14|75646|retinoic acid induced 14
mm9_v1_chr5_-_92738981_92739016	2.61232	HIF1A.p2	BC042708|Sdad1|231452|SDA1 domain containing 1	AK164608|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr5_-_20387826_20387876	2.61028	HIF1A.p2	AK037021|Phtf2|68770|putative homeodomain transcription factor 2	BC052841|Phtf2|68770|putative homeodomain transcription factor 2	AK042790|Phtf2|68770|putative homeodomain transcription factor 2	AK163376|Phtf2|68770|putative homeodomain transcription factor 2
mm9_v1_chr4_+_151413427_151413471	2.60661	HIF1A.p2	AK047599|Nol9|74035|nucleolar protein 9	AK164493|Nol9|74035|nucleolar protein 9	NM_001159599|Nol9|74035|nucleolar protein 9	NM_028727|Nol9|74035|nucleolar protein 9	BC024877|Nol9|74035|nucleolar protein 9	AK172043|Nol9|74035|nucleolar protein 9	AK014568|Nol9|74035|nucleolar protein 9	AK050948|Nol9|74035|nucleolar protein 9	AK157956|Nol9|74035|nucleolar protein 9	BC125432|Nol9|74035|nucleolar protein 9	BC132099|Nol9|74035|nucleolar protein 9	AK157398|Nol9|74035|nucleolar protein 9	AK079935|Nol9|74035|nucleolar protein 9	AK046761|Nol9|74035|nucleolar protein 9	BC096599|Nol9|74035|nucleolar protein 9	AK042581|Nol9|74035|nucleolar protein 9	BC051109|Nol9|74035|nucleolar protein 9
mm9_v1_chr10_+_79578849_79578946	2.60639	HIF1A.p2	AF129870|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr9_-_110556645_110556664	2.60068	HIF1A.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr17_-_26005680_26005704	2.59486	HIF1A.p2	AK020614|Fam195a|68241|family with sequence similarity 195, member A	AK003564|Fam195a|68241|family with sequence similarity 195, member A	NM_026633|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr17_+_35400983_35401008	2.58456	HIF1A.p2	J00407|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr9_-_44226119_44226149	2.57741	HIF1A.p2	AK162606|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr16_-_18248701_18248813	2.57226	HIF1A.p2	AK008276|Ranbp1|19385|RAN binding protein 1	AK002989|Ranbp1|19385|RAN binding protein 1	AK151167|Ranbp1|19385|RAN binding protein 1	AK153074|Ranbp1|19385|RAN binding protein 1	AK167053|Ranbp1|19385|RAN binding protein 1	AK088781|Ranbp1|19385|RAN binding protein 1	AK166642|Ranbp1|19385|RAN binding protein 1	NM_011239|Ranbp1|19385|RAN binding protein 1	X56045|Ranbp1|19385|RAN binding protein 1	X56046|Ranbp1|19385|RAN binding protein 1	BC061140|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr11_-_93829556_93829648	2.56578	HIF1A.p2	AF033377|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	AK034899|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	M35970|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	BC005629|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	U85511|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in	AK136353|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in
mm9_v1_chr11_+_121121273_121121393	2.56497	HIF1A.p2	EU882160|Foxk2|68837|forkhead box K2	NM_001080932|Foxk2|68837|forkhead box K2	AK139325|Foxk2|68837|forkhead box K2
mm9_v1_chr9_-_8004450_8004510	2.56426	HIF1A.p2	BC039125|Yap1|22601|yes-associated protein 1	AK198743|Yap1|22601|yes-associated protein 1
mm9_v1_chr12_-_28027541_28027588	2.56394	HIF1A.p2	AK146514|Sox11|20666|SRY-box containing gene 11	AF009414|Sox11|20666|SRY-box containing gene 11	BC078643|Sox11|20666|SRY-box containing gene 11	AK165693|Sox11|20666|SRY-box containing gene 11	AK165005|Sox11|20666|SRY-box containing gene 11	NM_009234|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr10_-_67011689_67011747	2.56262	HIF1A.p2	BC057106|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	BC058407|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	AK155334|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	NM_001005419|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase
mm9_v1_chrX_+_97821403_97821491	2.56259	HIF1A.p2	NM_008446|Kif4|16571|kinesin family member 4	AK084837|Kif4|16571|kinesin family member 4	AK135179|Kif4|16571|kinesin family member 4	BC050946|Kif4|16571|kinesin family member 4	BC054537|Kif4|16571|kinesin family member 4	AK171938|Kif4|16571|kinesin family member 4
mm9_v1_chr3_+_87734217_87734248	2.56114	HIF1A.p2	AK053778|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	AK155979|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	AK160738|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	NM_177663|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	BC098326|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2
mm9_v1_chr12_-_85559793_85559836	2.55753	HIF1A.p2	AK155768|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	NM_001163501|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene
mm9_v1_chr17_+_28828286_28828455	2.55598	HIF1A.p2	BC012235|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168508|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168514|Mapk14|26416|mitogen-activated protein kinase 14	NM_011951|Mapk14|26416|mitogen-activated protein kinase 14	BC085303|Mapk14|26416|mitogen-activated protein kinase 14	AK089059|Mapk14|26416|mitogen-activated protein kinase 14	AK133684|Mapk14|26416|mitogen-activated protein kinase 14	AF128892|Mapk14|26416|mitogen-activated protein kinase 14	BC018227|Mapk14|26416|mitogen-activated protein kinase 14	U10871|Mapk14|26416|mitogen-activated protein kinase 14	D83073|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr12_+_72237834_72237834	2.5524	HIF1A.p2	BC043104|2700049A03Rik|76967|RIKEN cDNA 2700049A03 gene	NM_001163378|2700049A03Rik|76967|RIKEN cDNA 2700049A03 gene	NM_029818|2700049A03Rik|76967|RIKEN cDNA 2700049A03 gene
mm9_v1_chr11_+_60231046_60231167	2.55176	HIF1A.p2	AK077759|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	AJ404329|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene
mm9_v1_chr9_-_86358490_86358538	2.54629	HIF1A.p2	BC115687|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	BC115686|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	AK049229|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	NM_027394|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein	AK011446|Ube2cbp|70348|ubiquitin-conjugating enzyme E2C binding protein
mm9_v1_chr6_+_64992810_64992853	2.54451	HIF1A.p2	AK134442|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK011724|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	AK122454|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr1_+_140860285_140860402	2.54211	HIF1A.p2	NM_001166501|Dennd1b|329260|DENN/MADD domain containing 1B	BC042698|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr6_-_125115580_125115612	2.54149	HIF1A.p2	BC093508|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083149|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC091768|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC094037|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK191938|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK192040|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK199608|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	AK201736|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085315|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC145810|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC145812|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	M32599|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC023196|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092267|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083065|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC095932|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC082592|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092294|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	NM_008084|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083079|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085275|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC083080|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC085274|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092252|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC020407|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC092264|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC096440|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC096590|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase	BC110311|Gapdh|14433|glyceraldehyde-3-phosphate dehydrogenase
mm9_v1_chr17_-_26005645_26005674	2.53514	HIF1A.p2	BC024332|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr3_-_144233091_144233106	2.52906	HIF1A.p2	BC025443|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr8_+_18846524_18846553	2.52444	HIF1A.p2	AK152889|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK003649|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK170093|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK152709|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	BC031987|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
mm9_v1_chr10_+_79167102_79167137	2.52391	HIF1A.p2	NM_001077184|Bsg|12215|basigin	NM_009768|Bsg|12215|basigin
mm9_v1_chr12_+_85350438_85350464	2.51374	HIF1A.p2	AK053680|Acot1|26897|acyl-CoA thioesterase 1	BC028261|Acot1|26897|acyl-CoA thioesterase 1	NM_012006|Acot1|26897|acyl-CoA thioesterase 1	Y14004|Acot1|26897|acyl-CoA thioesterase 1	BC003911|Acot1|26897|acyl-CoA thioesterase 1
mm9_v1_chr9_-_50425561_50425568	2.5121	HIF1A.p2	NM_001134902|AU019823|270156|expressed sequence AU019823	NM_212449|AU019823|270156|expressed sequence AU019823
mm9_v1_chr5_+_23356371_23356439	2.50404	HIF1A.p2	AK002390|2700038G22Rik|67194|RIKEN cDNA 2700038G22 gene
mm9_v1_chr2_+_30141908_30141954	2.50257	HIF1A.p2	BC028665|Nup188|227699|nucleoporin 188	AK052272|Nup188|227699|nucleoporin 188	BC032090|Nup188|227699|nucleoporin 188	BC096591|Nup188|227699|nucleoporin 188	AK129073|Nup188|227699|nucleoporin 188	NM_198304|Nup188|227699|nucleoporin 188
mm9_v1_chr1_-_191746072_191746205	2.50139	HIF1A.p2	AK197062|Smyd2|226830|SET and MYND domain containing 2	AK204951|Smyd2|226830|SET and MYND domain containing 2	AK164053|Smyd2|226830|SET and MYND domain containing 2	BC023119|Smyd2|226830|SET and MYND domain containing 2	NM_026796|Smyd2|226830|SET and MYND domain containing 2	AK145261|Smyd2|226830|SET and MYND domain containing 2	AK150857|Smyd2|226830|SET and MYND domain containing 2
mm9_v1_chr19_+_41557475_41557518	2.49221	HIF1A.p2	AK041621|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr7_+_13609462_13609530	2.48494	HIF1A.p2	BC089337|Trim28|21849|tripartite motif-containing 28	NM_011588|Trim28|21849|tripartite motif-containing 28	U67303|Trim28|21849|tripartite motif-containing 28
mm9_v1_chr14_+_70167372_70167466	2.48482	HIF1A.p2	AF176833|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr16_+_20672847_20672848	2.48401	HIF1A.p2	AK134557|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr11_-_120575035_120575080	2.48163	HIF1A.p2	BC052335|Stra13|20892|stimulated by retinoic acid 13	U95003|Stra13|20892|stimulated by retinoic acid 13	U95004|Stra13|20892|stimulated by retinoic acid 13	U95005|Stra13|20892|stimulated by retinoic acid 13	AK076181|Stra13|20892|stimulated by retinoic acid 13	AK080500|Stra13|20892|stimulated by retinoic acid 13	AK170126|Stra13|20892|stimulated by retinoic acid 13	NM_016665|Stra13|20892|stimulated by retinoic acid 13
mm9_v1_chr1_+_141351340_141351508	2.47907	HIF1A.p2	AK052326|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	NM_009791|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK050785|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AF533752|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK083710|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK079744|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AK052515|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)	AY971958|Aspm|12316|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm9_v1_chr5_+_123465011_123465126	2.47127	HIF1A.p2	AK052573|Orai1|109305|ORAI calcium release-activated calcium modulator 1	NM_175423|Orai1|109305|ORAI calcium release-activated calcium modulator 1
mm9_v1_chr7_-_4741145_4741257	2.46944	HIF1A.p2	AK008900|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	NM_029384|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	BC132101|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	BC144965|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene
mm9_v1_chr8_-_64238843_64238855	2.46323	HIF1A.p2	BC027364|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr2_+_144096696_144096740	2.46305	HIF1A.p2	AK043140|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	AK018387|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	AK167919|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr6_+_149090037_149090167	2.46036	HIF1A.p2	AK160463|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK029471|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC046911|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC065807|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	NM_177101|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK077292|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	BC048711|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene	AK132096|4833442J19Rik|320204|RIKEN cDNA 4833442J19 gene
mm9_v1_chr16_+_94085504_94085555	2.45683	HIF1A.p2	NM_011377|Sim2|20465|single-minded homolog 2 (Drosophila)	D63383|Sim2|20465|single-minded homolog 2 (Drosophila)	D64135|Sim2|20465|single-minded homolog 2 (Drosophila)
mm9_v1_chr6_+_117857771_117857856	2.45086	HIF1A.p2	NM_001166428|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_001166429|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr1_-_187153212_187153265	2.44705	HIF1A.p2	AK164435|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK051778|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK088965|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK036182|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK008042|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK043729|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	BC052403|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK050358|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK166832|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial
mm9_v1_chr1_-_164478475_164478591	2.44526	HIF1A.p2	BC014872|Mettl13|71449|methyltransferase like 13	NM_144877|Mettl13|71449|methyltransferase like 13
mm9_v1_chr15_-_89204248_89204287	2.44275	HIF1A.p2	BC019554|Sco2|100126824|SCO cytochrome oxidase deficient homolog 2 (yeast)	NM_001111288|Sco2|100126824|SCO cytochrome oxidase deficient homolog 2 (yeast)	AK013765|Sco2|100126824|SCO cytochrome oxidase deficient homolog 2 (yeast)
mm9_v1_chr10_+_82092582_82092692	2.44256	HIF1A.p2	NM_011561|Tdg|21665|thymine DNA glycosylase	NM_172552|Tdg|21665|thymine DNA glycosylase	AK089915|Gm9855|624784|thymine DNA glycosylase pseudogene	BC085471|Tdg|21665|thymine DNA glycosylase	AK164643|Tdg|21665|thymine DNA glycosylase	AK166357|Tdg|21665|thymine DNA glycosylase	AK164090|Tdg|21665|thymine DNA glycosylase	AF069519|Gm9855|624784|thymine DNA glycosylase pseudogene	BC085470|Tdg|21665|thymine DNA glycosylase	AK053870|Tdg|21665|thymine DNA glycosylase	AK169768|Tdg|21665|thymine DNA glycosylase	BC010315|Tdg|21665|thymine DNA glycosylase
mm9_v1_chr9_+_120480575_120480642	2.43966	HIF1A.p2	AK141887|Rpl14|67115|ribosomal protein L14	AK010600|Rpl14|67115|ribosomal protein L14	AK002946|Rpl14|67115|ribosomal protein L14	AK007807|Rpl14|67115|ribosomal protein L14	AK012277|Rpl14|67115|ribosomal protein L14	AK013912|Rpl14|67115|ribosomal protein L14	AK167146|Rpl14|67115|ribosomal protein L14	NM_025974|Rpl14|67115|ribosomal protein L14
mm9_v1_chr17_+_28906259_28906317	2.4371	HIF1A.p2	NM_011950|Mapk13|26415|mitogen-activated protein kinase 13	AK146993|Mapk13|26415|mitogen-activated protein kinase 13	BC001992|Mapk13|26415|mitogen-activated protein kinase 13	U81823|Mapk13|26415|mitogen-activated protein kinase 13
mm9_v1_chr5_+_8422837_8422987	2.42905	HIF1A.p2	AK044260|Slc25a40|319653|solute carrier family 25, member 40	AK045863|Slc25a40|319653|solute carrier family 25, member 40	NM_178766|Slc25a40|319653|solute carrier family 25, member 40	AK044862|Slc25a40|319653|solute carrier family 25, member 40	AK136770|Slc25a40|319653|solute carrier family 25, member 40	AK163037|Slc25a40|319653|solute carrier family 25, member 40	AK088444|Slc25a40|319653|solute carrier family 25, member 40	AK079538|Slc25a40|319653|solute carrier family 25, member 40	AK084797|Slc25a40|319653|solute carrier family 25, member 40	BC083103|Slc25a40|319653|solute carrier family 25, member 40
mm9_v1_chr5_-_139936448_139936481	2.42643	HIF1A.p2	BC044867|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	AK014271|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	BC058580|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chr10_-_6373309_6373324	2.42576	HIF1A.p2	BC058265|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr11_-_93747039_93747079	2.39468	HIF1A.p2	BC119621|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	BC119622|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	AK167248|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	NM_001013375|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr7_-_97129450_97129518	2.38263	HIF1A.p2	BC012966|Eed|13626|embryonic ectoderm development	U78103|Eed|13626|embryonic ectoderm development	NM_021876|Eed|13626|embryonic ectoderm development	U97675|Eed|13626|embryonic ectoderm development
mm9_v1_chr15_+_73578455_73578455	2.37913	HIF1A.p2	AK147489|Ptp4a3|19245|protein tyrosine phosphatase 4a3	NM_008975|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr10_-_75905593_75905656	2.37528	HIF1A.p2	NM_008787|Pcnt|18541|pericentrin (kendrin)
mm9_v1_chr14_+_31528352_31528352	2.37487	HIF1A.p2	AK160573|Sfmbt1|54650|Scm-like with four mbt domains 1	NM_001166531|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr3_+_87710417_87710583	2.37334	HIF1A.p2	AK076021|Hdgf|15191|hepatoma-derived growth factor	AK005359|Hdgf|15191|hepatoma-derived growth factor	D63707|Hdgf|15191|hepatoma-derived growth factor	AK029475|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr13_-_38620304_38620305	2.3724	HIF1A.p2	AK224957|Txndc5|105245|thioredoxin domain containing 5	AK224958|Txndc5|105245|thioredoxin domain containing 5	AK224962|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr15_+_81977766_81977845	2.36739	HIF1A.p2	AK217643|Srebf2|20788|sterol regulatory element binding factor 2	AF374267|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr15_+_74552040_74552053	2.35465	HIF1A.p2	AK019809|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr1_-_17087821_17087878	2.34902	HIF1A.p2	AB024445|Jph1|57339|junctophilin 1	NM_020604|Jph1|57339|junctophilin 1
mm9_v1_chr6_+_64992861_64992872	2.34787	HIF1A.p2	AK147884|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr4_+_151699954_151699986	2.34471	HIF1A.p2	BC007139|Rpl22|19934|ribosomal protein L22	AK003022|Rpl22|19934|ribosomal protein L22	AK169731|Rpl22|19934|ribosomal protein L22	AK009094|Rpl22|19934|ribosomal protein L22	D17653|Rpl22|19934|ribosomal protein L22	AK168353|Rpl22|19934|ribosomal protein L22	AK169078|Rpl22|19934|ribosomal protein L22	BC021344|Rpl22|19934|ribosomal protein L22	NM_009079|Rpl22|19934|ribosomal protein L22
mm9_v1_chrX_-_7651846_7651885	2.33087	HIF1A.p2	AK139757|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK169592|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	NM_011514|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr4_-_129277744_129277893	2.3187	HIF1A.p2	BC029625|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK002896|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AF271072|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK089340|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK012375|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK010781|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK172208|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	AK149955|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I	NM_018799|Eif3i|54709|eukaryotic translation initiation factor 3, subunit I
mm9_v1_chr17_+_35035395_35035464	2.3157	HIF1A.p2	BC058357|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	AB077209|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	NM_147151|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2
mm9_v1_chr16_-_18248659_18248687	2.31151	HIF1A.p2	L25255|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr10_+_21878374_21878474	2.30672	HIF1A.p2	AK131854|Raet1e|379043|retinoic acid early transcript 1E	AB284505|H60b|667281|histocompatibility 60b	D64160|Raet1a|19368|retinoic acid early transcript 1, alpha	NM_009016|Raet1a|19368|retinoic acid early transcript 1, alpha	FJ594065|Raet1e|379043|retinoic acid early transcript 1E	FJ594067|Raet1e|379043|retinoic acid early transcript 1E	FJ594068|Raet1e|379043|retinoic acid early transcript 1E
mm9_v1_chr3_+_19088109_19088272	2.30362	HIF1A.p2	DQ369744|Mtfr1|67472|mitochondrial fission regulator 1	AK075992|Mtfr1|67472|mitochondrial fission regulator 1	AK018048|Mtfr1|67472|mitochondrial fission regulator 1	AK004846|Mtfr1|67472|mitochondrial fission regulator 1	NM_026182|Mtfr1|67472|mitochondrial fission regulator 1	AK075822|Mtfr1|67472|mitochondrial fission regulator 1	AK009195|Mtfr1|67472|mitochondrial fission regulator 1	AK134822|Mtfr1|67472|mitochondrial fission regulator 1	BC019971|Mtfr1|67472|mitochondrial fission regulator 1
mm9_v1_chr1_-_51535232_51535262	2.30324	HIF1A.p2	AK167541|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK167652|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK028886|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK031015|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK042351|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK049396|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK051607|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077226|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK077767|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK079434|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK083915|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK163613|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK166300|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AY880264|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	NM_028696|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A	AK076824|Obfc2a|109019|oligonucleotide/oligosaccharide-binding fold containing 2A
mm9_v1_chr12_+_107022903_107023027	2.29755	HIF1A.p2	NM_011112|Papola|18789|poly (A) polymerase alpha	AK028940|Papola|18789|poly (A) polymerase alpha	AK090096|Papola|18789|poly (A) polymerase alpha	AK132704|Papola|18789|poly (A) polymerase alpha	AK134552|Papola|18789|poly (A) polymerase alpha	BC060128|Papola|18789|poly (A) polymerase alpha	U58134|Papola|18789|poly (A) polymerase alpha	U52197|Papola|18789|poly (A) polymerase alpha
mm9_v1_chr1_-_95375372_95375387	2.293	HIF1A.p2	BC027779|Hdlbp|110611|high density lipoprotein (HDL) binding protein	BC027788|Hdlbp|110611|high density lipoprotein (HDL) binding protein	NM_133808|Hdlbp|110611|high density lipoprotein (HDL) binding protein
mm9_v1_chr6_-_112646587_112646665	2.28099	HIF1A.p2	AF205278|Rad18|58186|RAD18 homolog (S. cerevisiae)	BC011120|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK048975|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK028505|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK012795|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK030043|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_001167730|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_021385|Rad18|58186|RAD18 homolog (S. cerevisiae)
mm9_v1_chr5_+_145016060_145016213	2.2766	HIF1A.p2	AK049027|Bri3|55950|brain protein I3	NM_018772|Bri3|55950|brain protein I3	AK080467|Bri3|55950|brain protein I3	BC005677|Bri3|55950|brain protein I3	BC095955|Bri3|55950|brain protein I3	BC021149|Bri3|55950|brain protein I3	AF106967|Bri3|55950|brain protein I3
mm9_v1_chr6_+_116287992_116288071	2.27409	HIF1A.p2	AK154976|March8|71779|membrane-associated ring finger (C3HC4) 8	BC050908|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr1_-_187153269_187153279	2.26549	HIF1A.p2	AK085714|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK043590|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK048653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	AK078183|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial	NM_198653|Iars2|381314|isoleucine-tRNA synthetase 2, mitochondrial
mm9_v1_chr7_-_149763980_149764029	2.26372	HIF1A.p2	AK135234|H19|14955|H19 fetal liver mRNA	AK145379|H19|14955|H19 fetal liver mRNA
mm9_v1_chr5_-_5559500_5559542	2.26262	HIF1A.p2	NM_153116|Gtpbp10|207704|GTP-binding protein 10 (putative)	BC034507|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK139595|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK160252|Gtpbp10|207704|GTP-binding protein 10 (putative)
mm9_v1_chr11_+_68505416_68505481	2.25068	HIF1A.p2	NM_175260|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr9_+_61220162_61220251	2.24966	HIF1A.p2	NM_001083927|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_001083928|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)	NM_009389|Tle3|21887|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm9_v1_chr5_-_52581705_52581765	2.24362	HIF1A.p2	BC003745|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC100343|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK146441|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK145983|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK151015|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK151757|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK149869|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK168323|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK168835|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK169174|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	NM_001042620|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	NM_007839|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr6_+_116288075_116288140	2.23962	HIF1A.p2	BC053090|March8|71779|membrane-associated ring finger (C3HC4) 8	NM_027920|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr2_-_73052356_73052476	2.23065	HIF1A.p2	AK199282|Ola1|67059|Obg-like ATPase 1	AK017803|Ola1|67059|Obg-like ATPase 1	AK019142|Ola1|67059|Obg-like ATPase 1	BC029207|Ola1|67059|Obg-like ATPase 1	BC011318|Ola1|67059|Obg-like ATPase 1	AK010817|Ola1|67059|Obg-like ATPase 1	AK167458|Ola1|67059|Obg-like ATPase 1	AK159873|Ola1|67059|Obg-like ATPase 1	AK170982|Ola1|67059|Obg-like ATPase 1	AK012998|Ola1|67059|Obg-like ATPase 1
mm9_v1_chr9_+_98197280_98197292	2.22383	HIF1A.p2	BC092086|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr2_+_74543545_74543545	2.22088	HIF1A.p2	NM_008276|Hoxd8|15437|homeobox D8
mm9_v1_chr15_+_74551611_74551685	2.21788	HIF1A.p2	BC047266|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene	NM_198607|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr13_-_38620109_38620303	2.21762	HIF1A.p2	AK225012|Txndc5|105245|thioredoxin domain containing 5	AK225013|Txndc5|105245|thioredoxin domain containing 5	AK225015|Txndc5|105245|thioredoxin domain containing 5	AK225022|Txndc5|105245|thioredoxin domain containing 5	AK225016|Txndc5|105245|thioredoxin domain containing 5	BC024505|Txndc5|105245|thioredoxin domain containing 5	AY548112|Txndc5|105245|thioredoxin domain containing 5	BC046789|Txndc5|105245|thioredoxin domain containing 5	AK225020|Txndc5|105245|thioredoxin domain containing 5	AK225021|Txndc5|105245|thioredoxin domain containing 5	AK224933|Txndc5|105245|thioredoxin domain containing 5	AK224949|Txndc5|105245|thioredoxin domain containing 5	AK224950|Txndc5|105245|thioredoxin domain containing 5	AK224970|Txndc5|105245|thioredoxin domain containing 5	AK224973|Txndc5|105245|thioredoxin domain containing 5	AK224987|Txndc5|105245|thioredoxin domain containing 5	AK224974|Txndc5|105245|thioredoxin domain containing 5	AK224922|Txndc5|105245|thioredoxin domain containing 5	AK224926|Txndc5|105245|thioredoxin domain containing 5	AK224984|Txndc5|105245|thioredoxin domain containing 5	AK224930|Txndc5|105245|thioredoxin domain containing 5	AK224943|Txndc5|105245|thioredoxin domain containing 5	AK224948|Txndc5|105245|thioredoxin domain containing 5	AK224997|Txndc5|105245|thioredoxin domain containing 5	AK224998|Txndc5|105245|thioredoxin domain containing 5	AK224985|Txndc5|105245|thioredoxin domain containing 5	AK224995|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr11_-_43649708_43649999	2.2169	HIF1A.p2	BC138653|Adra1b|11548|adrenergic receptor, alpha 1b	BC138654|Adra1b|11548|adrenergic receptor, alpha 1b	AK043877|Adra1b|11548|adrenergic receptor, alpha 1b	NM_007416|Adra1b|11548|adrenergic receptor, alpha 1b	AK139448|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr11_-_82684245_82684245	2.20888	HIF1A.p2	AK128983|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164570|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr14_-_51544484_51544489	2.20719	HIF1A.p2	BC091757|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr4_-_106926041_106926144	2.20239	HIF1A.p2	BC031894|Lrrc42|77809|leucine rich repeat containing 42	BC027203|Lrrc42|77809|leucine rich repeat containing 42	NM_029985|Lrrc42|77809|leucine rich repeat containing 42
mm9_v1_chr10_+_84565370_84565389	2.19642	HIF1A.p2	NM_001013028|AI597468|103266|expressed sequence AI597468
mm9_v1_chr11_-_116704485_116704688	2.19314	HIF1A.p2	EF527405|Jmjd6|107817|jumonji domain containing 6	BC006067|Jmjd6|107817|jumonji domain containing 6	BC011503|Jmjd6|107817|jumonji domain containing 6	AK122317|Jmjd6|107817|jumonji domain containing 6	AF304118|Jmjd6|107817|jumonji domain containing 6
mm9_v1_chr3_-_129534032_129534091	2.19288	HIF1A.p2	AK075923|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	AK167001|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)	AK021256|Gar1|68147|GAR1 ribonucleoprotein homolog (yeast)
mm9_v1_chr3_-_58496285_58496330	2.1917	HIF1A.p2	AK139626|Siah2|20439|seven in absentia 2	BC058400|Siah2|20439|seven in absentia 2	NM_009174|Siah2|20439|seven in absentia 2	AK149316|Siah2|20439|seven in absentia 2
mm9_v1_chr18_-_77803843_77803942	2.18915	HIF1A.p2	DQ465971|8030462N17Rik|212163|RIKEN cDNA 8030462N17 gene	NM_001164504|Rnf165|225743|ring finger protein 165
mm9_v1_chr11_+_69778907_69778927	2.18791	HIF1A.p2	AK145504|Cldn7|53624|claudin 7	NM_016887|Cldn7|53624|claudin 7
mm9_v1_chr1_-_120207674_120207826	2.18779	HIF1A.p2	AK181409|Tsn|22099|translin	AK183078|Tsn|22099|translin	AK184665|Tsn|22099|translin	AK189586|Tsn|22099|translin	AK198107|Tsn|22099|translin	AK199692|Tsn|22099|translin	AK202525|Tsn|22099|translin	AK010737|Tsn|22099|translin	AF234179|Tsn|22099|translin	NM_011650|Tsn|22099|translin	X81464|Tsn|22099|translin	BC004615|Tsn|22099|translin	AK165598|Tsn|22099|translin	AK011220|Tsn|22099|translin	AK150529|Tsn|22099|translin	AK151448|Tsn|22099|translin
mm9_v1_chr10_-_12912880_12912990	2.17537	HIF1A.p2	AK011491|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC069962|Ltv1|353258|LTV1 homolog (S. cerevisiae)	BC067062|Ltv1|353258|LTV1 homolog (S. cerevisiae)	NM_181470|Ltv1|353258|LTV1 homolog (S. cerevisiae)
mm9_v1_chr4_-_58925575_58925638	2.17462	HIF1A.p2	AK087690|AI314180|230249|expressed sequence AI314180	BC058684|AI314180|230249|expressed sequence AI314180	NM_172381|AI314180|230249|expressed sequence AI314180	AK041579|AI314180|230249|expressed sequence AI314180
mm9_v1_chr11_+_4167080_4167097	2.17286	HIF1A.p2	AK042018|Lif|16878|leukemia inhibitory factor	NM_001039537|Lif|16878|leukemia inhibitory factor
mm9_v1_chr17_-_45710161_45710212	2.17256	HIF1A.p2	AK184233|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK191250|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK194406|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195161|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195294|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196279|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196368|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK197826|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK198614|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK216006|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK146809|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M36829|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC002167|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC088985|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M18186|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AF465639|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	NM_008302|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr19_-_31839462_31839522	2.15976	HIF1A.p2	AK051624|Prkg1|19091|protein kinase, cGMP-dependent, type I	AK083991|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_001013833|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chr13_+_21272294_21272469	2.15929	HIF1A.p2	BC003219|Trim27|19720|tripartite motif-containing 27	AK088180|Trim27|19720|tripartite motif-containing 27	X75343|Trim27|19720|tripartite motif-containing 27
mm9_v1_chr17_-_13185324_13185414	2.15096	HIF1A.p2	AK076111|Wtap|60532|Wilms' tumour 1-associating protein	NM_175394|Wtap|60532|Wilms' tumour 1-associating protein	AK031965|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr9_+_108594470_108594519	2.14601	HIF1A.p2	AF533977|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	NM_008924|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC080276|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC075623|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha
mm9_v1_chr18_+_67934517_67934670	2.13616	HIF1A.p2	AK143727|Seh1l|72124|SEH1-like (S. cerevisiae	NM_001039088|Seh1l|72124|SEH1-like (S. cerevisiae	NM_028112|Seh1l|72124|SEH1-like (S. cerevisiae	AK170591|Seh1l|72124|SEH1-like (S. cerevisiae	BC027244|Seh1l|72124|SEH1-like (S. cerevisiae	AK011330|Seh1l|72124|SEH1-like (S. cerevisiae	AK169231|Seh1l|72124|SEH1-like (S. cerevisiae	AK169388|Seh1l|72124|SEH1-like (S. cerevisiae	AK088835|Seh1l|72124|SEH1-like (S. cerevisiae	AK166573|Seh1l|72124|SEH1-like (S. cerevisiae
mm9_v1_chr14_+_31528034_31528081	2.13544	HIF1A.p2	NM_019460|Sfmbt1|54650|Scm-like with four mbt domains 1	BC066188|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr11_-_82721859_82721896	2.13383	HIF1A.p2	BC018399|Nle1|217011|notchless homolog 1 (Drosophila)	BC035421|Nle1|217011|notchless homolog 1 (Drosophila)	AK170853|Nle1|217011|notchless homolog 1 (Drosophila)	AK141230|Nle1|217011|notchless homolog 1 (Drosophila)	NM_145431|Nle1|217011|notchless homolog 1 (Drosophila)
mm9_v1_chrX_-_162948399_162948409	2.13041	HIF1A.p2	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr5_+_29895742_29895846	2.12463	HIF1A.p2	AK046056|Ube3c|100763|ubiquitin protein ligase E3C	NM_133907|Ube3c|100763|ubiquitin protein ligase E3C	AK122187|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr2_-_105239368_105239475	2.12319	HIF1A.p2	BC049108|Rcn1|19672|reticulocalbin 1	AK159973|Rcn1|19672|reticulocalbin 1	AK017494|Rcn1|19672|reticulocalbin 1	D13003|Rcn1|19672|reticulocalbin 1	AK133971|Rcn1|19672|reticulocalbin 1	NM_009037|Rcn1|19672|reticulocalbin 1
mm9_v1_chr8_+_18846471_18846514	2.1227	HIF1A.p2	AK089885|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	AK082137|Agpat5|52123|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
mm9_v1_chr10_-_39966784_39966854	2.11731	HIF1A.p2	AK051135|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_001042556|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK020030|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AB041810|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK017678|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK013395|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK011644|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012641|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK010776|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	AK012188|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)	NM_023323|Rpf2|67239|ribosome production factor 2 homolog (S. cerevisiae)
mm9_v1_chr8_-_126544907_126544994	2.11482	HIF1A.p2	AK033477|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm9_v1_chr10_-_31329530_31329530	2.11098	HIF1A.p2	NM_001146349|Rnf217|268291|ring finger protein 217
mm9_v1_chr16_-_57606866_57606989	2.10413	HIF1A.p2	BC038891|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	BC038682|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019808|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK080386|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK003195|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019979|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK012168|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK136657|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	NM_025599|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene
mm9_v1_chr3_-_75760691_75760752	2.08867	HIF1A.p2	BC086642|Golim4|73124|golgi integral membrane protein 4	BC089354|Golim4|73124|golgi integral membrane protein 4	NM_175193|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr3_+_135101248_135101271	2.08744	HIF1A.p2	AK167138|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK003163|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009276|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK009936|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr5_+_111082466_111082502	2.08606	HIF1A.p2	NM_027156|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	AK141361|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	BC060646|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	AK152599|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
mm9_v1_chr9_-_8004559_8004652	2.07965	HIF1A.p2	BC094313|Yap1|22601|yes-associated protein 1	BC014733|Yap1|22601|yes-associated protein 1	X80508|Yap1|22601|yes-associated protein 1	AK157234|Yap1|22601|yes-associated protein 1	NM_001171147|Yap1|22601|yes-associated protein 1	NM_009534|Yap1|22601|yes-associated protein 1
mm9_v1_chr11_+_11586215_11586246	2.07863	HIF1A.p2	NM_001025597|Ikzf1|22778|IKAROS family zinc finger 1	NM_009578|Ikzf1|22778|IKAROS family zinc finger 1	AK036833|Ikzf1|22778|IKAROS family zinc finger 1	AK040268|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr10_+_31033188_31033271	2.07447	HIF1A.p2	BC104360|Hddc2|69692|HD domain containing 2	BC104361|Hddc2|69692|HD domain containing 2	NM_027168|Hddc2|69692|HD domain containing 2	AK009957|Hddc2|69692|HD domain containing 2
mm9_v1_chr11_-_70796471_70796535	2.07216	HIF1A.p2	AK010746|C1qbp|12261|complement component 1, q subcomponent binding protein	BC038075|C1qbp|12261|complement component 1, q subcomponent binding protein	AK169764|C1qbp|12261|complement component 1, q subcomponent binding protein	AK011868|C1qbp|12261|complement component 1, q subcomponent binding protein	NM_007573|C1qbp|12261|complement component 1, q subcomponent binding protein
mm9_v1_chr6_-_100237390_100237463	2.07086	HIF1A.p2	AK033024|Rybp|56353|RING1 and YY1 binding protein	AF101779|Rybp|56353|RING1 and YY1 binding protein	BC080287|Rybp|56353|RING1 and YY1 binding protein
mm9_v1_chr18_-_35114004_35114004	2.06878	HIF1A.p2	BC052727|Hspa9|15526|heat shock protein 9	BC057343|Hspa9|15526|heat shock protein 9	NM_010481|Hspa9|15526|heat shock protein 9
mm9_v1_chr16_+_20672770_20672837	2.06864	HIF1A.p2	AK081982|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_001005331|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	NM_145941|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr3_-_144232768_144232936	2.06821	HIF1A.p2	AF169243|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	AF060178|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	BC059008|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr3_-_138152336_138152369	2.0682	HIF1A.p2	BC096469|Metap1|75624|methionyl aminopeptidase 1	AK077694|Metap1|75624|methionyl aminopeptidase 1	NM_175224|Metap1|75624|methionyl aminopeptidase 1	AK153944|Metap1|75624|methionyl aminopeptidase 1	AK165034|Metap1|75624|methionyl aminopeptidase 1	AK152138|Metap1|75624|methionyl aminopeptidase 1	AK153231|Metap1|75624|methionyl aminopeptidase 1
mm9_v1_chr11_-_60692261_60692327	2.06052	HIF1A.p2	BC048514|Tmem11|216821|transmembrane protein 11
mm9_v1_chr1_+_122499031_122499257	2.05629	HIF1A.p2	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chr1_+_133807034_133807132	2.05521	HIF1A.p2	NM_001145804|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	NM_175294|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049825|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK078816|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	BC039951|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm9_v1_chr9_-_114690887_114691007	2.05183	HIF1A.p2	AK151785|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AF188504|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168280|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	NM_133978|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC038633|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK167886|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC026773|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168024|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AY241869|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK040123|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7
mm9_v1_chr10_-_77472453_77472498	2.04447	HIF1A.p2	J03928|Pfkl|18641|phosphofructokinase, liver, B-type	AK036318|Pfkl|18641|phosphofructokinase, liver, B-type	BC052914|Pfkl|18641|phosphofructokinase, liver, B-type	AK159328|Pfkl|18641|phosphofructokinase, liver, B-type	BC020097|Pfkl|18641|phosphofructokinase, liver, B-type	BC029336|Pfkl|18641|phosphofructokinase, liver, B-type	AK081313|Pfkl|18641|phosphofructokinase, liver, B-type	AK030511|Pfkl|18641|phosphofructokinase, liver, B-type	AK008812|Pfkl|18641|phosphofructokinase, liver, B-type	AK168660|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr3_-_105490320_105490491	2.04416	HIF1A.p2	AK050950|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF217000|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF217001|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AJ250027|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AK154518|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC125471|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC137721|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	NM_017397|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF220454|Ddx20|53975|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
mm9_v1_chr3_+_28704426_28704449	2.03766	HIF1A.p2	AK170359|Rpl22l1|68028|ribosomal protein L22 like 1	AK008915|Rpl22l1|68028|ribosomal protein L22 like 1	AK013966|Rpl22l1|68028|ribosomal protein L22 like 1	NM_026517|Rpl22l1|68028|ribosomal protein L22 like 1	AK010265|Rpl22l1|68028|ribosomal protein L22 like 1	BC026533|Rpl22l1|68028|ribosomal protein L22 like 1
mm9_v1_chr12_-_40860769_40860814	2.03622	HIF1A.p2	AK133484|Scin|20259|scinderin	AK167739|Scin|20259|scinderin	BC063328|Scin|20259|scinderin	U04354|Scin|20259|scinderin	Y13971|Scin|20259|scinderin	AK173295|Scin|20259|scinderin	AK171530|Scin|20259|scinderin	NM_001146196|Scin|20259|scinderin	NM_009132|Scin|20259|scinderin
mm9_v1_chr11_-_109472694_109472694	2.0335	HIF1A.p2	BC025560|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1
mm9_v1_chr3_-_58495986_58496041	2.02592	HIF1A.p2	Z19581|Siah2|20439|seven in absentia 2
mm9_v1_chr1_-_182186429_182186434	2.02541	HIF1A.p2	AK148111|Psen2|19165|presenilin 2	NM_001128605|Psen2|19165|presenilin 2
mm9_v1_chr15_+_98956940_98957052	2.02296	HIF1A.p2	BC072579|Spats2|72572|spermatogenesis associated, serine-rich 2
mm9_v1_chr1_-_172105009_172105087	2.01764	HIF1A.p2	BC016406|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK036243|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK147139|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK081690|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK049519|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	NM_133806|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK047566|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1
mm9_v1_chr4_-_131978279_131978374	2.01742	HIF1A.p2	BC096033|Phactr4|100169|phosphatase and actin regulator 4	AK049209|Phactr4|100169|phosphatase and actin regulator 4	BC075672|Phactr4|100169|phosphatase and actin regulator 4	AK220496|Phactr4|100169|phosphatase and actin regulator 4	NM_001161797|Phactr4|100169|phosphatase and actin regulator 4	NM_175306|Phactr4|100169|phosphatase and actin regulator 4
mm9_v1_chr4_-_120242805_120242900	2.01441	HIF1A.p2	AK161110|Ctps|51797|cytidine 5'-triphosphate synthase	AK148259|Ctps|51797|cytidine 5'-triphosphate synthase	BC006698|Ctps|51797|cytidine 5'-triphosphate synthase	AK164232|Ctps|51797|cytidine 5'-triphosphate synthase	U49350|Ctps|51797|cytidine 5'-triphosphate synthase	AK146476|Ctps|51797|cytidine 5'-triphosphate synthase	NM_016748|Ctps|51797|cytidine 5'-triphosphate synthase
mm9_v1_chr16_+_16213434_16213437	2.01266	HIF1A.p2	AK004650|Pkp2|67451|plakophilin 2	AK004731|Pkp2|67451|plakophilin 2	AK049481|Pkp2|67451|plakophilin 2	AK162000|Pkp2|67451|plakophilin 2	AK167660|Pkp2|67451|plakophilin 2	BC138252|Pkp2|67451|plakophilin 2	BC138253|Pkp2|67451|plakophilin 2	NM_026163|Pkp2|67451|plakophilin 2
mm9_v1_chr17_+_25377114_25377187	2.00941	HIF1A.p2	AK158743|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_001163718|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_026676|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK002309|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK003675|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK170074|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	BC089019|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK169072|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene
mm9_v1_chr6_-_39507593_39507744	2.00483	HIF1A.p2	AK160784|Dennd2a|209773|DENN/MADD domain containing 2A	AK167298|Dennd2a|209773|DENN/MADD domain containing 2A	AK165202|Dennd2a|209773|DENN/MADD domain containing 2A	BC056367|Dennd2a|209773|DENN/MADD domain containing 2A	BC057310|Dennd2a|209773|DENN/MADD domain containing 2A	AK047138|Dennd2a|209773|DENN/MADD domain containing 2A
mm9_v1_chr6_-_70741991_70742200	2.00406	HIF1A.p2	BC053526|Rpia|19895|ribose 5-phosphate isomerase A	AK137235|Rpia|19895|ribose 5-phosphate isomerase A	L35034|Rpia|19895|ribose 5-phosphate isomerase A	NM_009075|Rpia|19895|ribose 5-phosphate isomerase A
mm9_v1_chr14_+_35487052_35487113	1.99591	HIF1A.p2	AK046038|Wapal|218914|wings apart-like homolog (Drosophila)	AK129105|Wapal|218914|wings apart-like homolog (Drosophila)	NM_001004436|Wapal|218914|wings apart-like homolog (Drosophila)
mm9_v1_chr4_-_88940294_88940522	1.99567	HIF1A.p2	EU071702|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	AB221638|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	BC058190|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	L76092|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	S80650|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	NM_009877|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A
mm9_v1_chr3_-_135354500_135354532	1.99498	HIF1A.p2	BC050841|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105	NM_008689|Nfkb1|18033|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105
mm9_v1_chr11_-_76031013_76031165	1.99352	HIF1A.p2	BC031425|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK028076|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK165864|Gemin4|276919|gem (nuclear organelle) associated protein 4	BC062157|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK141078|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK154061|Gemin4|276919|gem (nuclear organelle) associated protein 4	NM_177367|Gemin4|276919|gem (nuclear organelle) associated protein 4	AK133821|Gemin4|276919|gem (nuclear organelle) associated protein 4
mm9_v1_chr10_+_79317396_79317408	1.9922	HIF1A.p2	BC066210|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr7_-_34981664_34981695	1.98847	HIF1A.p2	BC115797|Pdcd2l|68079|programmed cell death 2-like	AK077948|Pdcd2l|68079|programmed cell death 2-like	NM_026549|Pdcd2l|68079|programmed cell death 2-like	AK151495|Pdcd2l|68079|programmed cell death 2-like	AK003339|Pdcd2l|68079|programmed cell death 2-like	AK154811|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr18_-_35113995_35113999	1.98815	HIF1A.p2	AK030299|Hspa9|15526|heat shock protein 9	AK145965|Hspa9|15526|heat shock protein 9	AK167856|Hspa9|15526|heat shock protein 9
mm9_v1_chr11_-_102178941_102179000	1.98763	HIF1A.p2	AK158935|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr3_-_86724093_86724302	1.98612	HIF1A.p2	AY968049|Dclk2|70762|doublecortin-like kinase 2	AY968050|Dclk2|70762|doublecortin-like kinase 2	AY968051|Dclk2|70762|doublecortin-like kinase 2	BC060192|Dclk2|70762|doublecortin-like kinase 2	AB198721|Dclk2|70762|doublecortin-like kinase 2	AK049179|Dclk2|70762|doublecortin-like kinase 2	AK049126|Dclk2|70762|doublecortin-like kinase 2	AK082633|Dclk2|70762|doublecortin-like kinase 2
mm9_v1_chr2_+_31325763_31325817	1.9837	HIF1A.p2	BC002074|Ass1|11898|argininosuccinate synthetase 1	NM_007494|Ass1|11898|argininosuccinate synthetase 1
mm9_v1_chr12_-_85394756_85394800	1.97908	HIF1A.p2	AK132490|4732463B04Rik|100038552|RIKEN cDNA 4732463B04 gene
mm9_v1_chr11_-_72951771_72951795	1.97832	HIF1A.p2	BC113148|Gsg2|14841|germ cell-specific gene 2	AK138750|Gsg2|14841|germ cell-specific gene 2	D87326|Gsg2|14841|germ cell-specific gene 2	NM_010353|Gsg2|14841|germ cell-specific gene 2
mm9_v1_chr10_+_79167255_79167267	1.97747	HIF1A.p2	BC010270|Bsg|12215|basigin
mm9_v1_chr6_-_31513817_31513936	1.97207	HIF1A.p2	AB028048|Podxl|27205|podocalyxin-like	AF290209|Podxl|27205|podocalyxin-like	BC052442|Podxl|27205|podocalyxin-like	BC054530|Podxl|27205|podocalyxin-like	NM_013723|Podxl|27205|podocalyxin-like
mm9_v1_chr6_+_35127603_35127646	1.96909	HIF1A.p2	AK014419|Nup205|70699|nucleoporin 205	NM_027513|Nup205|70699|nucleoporin 205	AK087717|Nup205|70699|nucleoporin 205	AK148473|Nup205|70699|nucleoporin 205	BC058729|Nup205|70699|nucleoporin 205
mm9_v1_chr8_-_23509015_23509092	1.96819	HIF1A.p2	AK081243|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK052758|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK154988|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	NM_181325|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
mm9_v1_chrX_-_7651692_7651751	1.96533	HIF1A.p2	AK169389|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK088405|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF193861|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF019969|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK132238|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	BC023860|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr2_-_23427476_23427627	1.96025	HIF1A.p2	AK162056|Spopl|76857|speckle-type POZ protein-like	BC111867|Spopl|76857|speckle-type POZ protein-like	AK157283|Spopl|76857|speckle-type POZ protein-like	NM_001165997|Spopl|76857|speckle-type POZ protein-like	NM_001165998|Spopl|76857|speckle-type POZ protein-like	NM_029773|Spopl|76857|speckle-type POZ protein-like
mm9_v1_chrX_-_45866446_45866665	1.94741	HIF1A.p2	AK211196|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AF100927|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	AK133764|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	BC003292|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	DQ016499|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1	NM_012019|Aifm1|26926|apoptosis-inducing factor, mitochondrion-associated 1
mm9_v1_chr4_-_133742875_133742895	1.93954	HIF1A.p2	BC031729|Ccdc21|70012|coiled-coil domain containing 21
mm9_v1_chr5_-_124804538_124804560	1.93528	HIF1A.p2	BC103772|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr10_+_79167197_79167254	1.93468	HIF1A.p2	AY089967|Bsg|12215|basigin	AK002332|Bsg|12215|basigin	AK011364|Bsg|12215|basigin	AK147225|Bsg|12215|basigin	D00611|Bsg|12215|basigin	S63813|Bsg|12215|basigin	Y16256|Bsg|12215|basigin
mm9_v1_chr10_+_95403283_95403412	1.93044	HIF1A.p2	AK042055|Eea1|216238|early endosome antigen 1	NM_001001932|Eea1|216238|early endosome antigen 1	AK082278|Eea1|216238|early endosome antigen 1	AK163235|Eea1|216238|early endosome antigen 1	BC021363|Eea1|216238|early endosome antigen 1	BC075637|Eea1|216238|early endosome antigen 1	AK046231|Eea1|216238|early endosome antigen 1	AK040844|Eea1|216238|early endosome antigen 1
mm9_v1_chr1_+_9535477_9535591	1.92448	HIF1A.p2	AK142041|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	NM_021511|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC003481|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AB041589|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK122207|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	BC055925|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK017683|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK010178|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019913|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK019257|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm9_v1_chr14_-_73109254_73109390	1.92135	HIF1A.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr18_+_31948788_31948829	1.92106	HIF1A.p2	AK011600|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027002|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	AK009093|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	BC004810|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027101|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D
mm9_v1_chr12_-_17006921_17006925	1.9193	HIF1A.p2	AK138680|Pqlc3|217430|PQ loop repeat containing	NM_001161111|Pqlc3|217430|PQ loop repeat containing	NM_172574|Pqlc3|217430|PQ loop repeat containing
mm9_v1_chr16_+_57549340_57549381	1.9161	HIF1A.p2	AK019472|Filip1l|78749|filamin A interacting protein 1-like	NM_001177871|Filip1l|78749|filamin A interacting protein 1-like	AK132319|Filip1l|78749|filamin A interacting protein 1-like	BC024523|Filip1l|78749|filamin A interacting protein 1-like	BC062166|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr4_+_140703843_140703846	1.90732	HIF1A.p2	AK170202|Fbxo42|213499|F-box protein 42	AK171215|Fbxo42|213499|F-box protein 42	BC058667|Fbxo42|213499|F-box protein 42	AK150804|Fbxo42|213499|F-box protein 42
mm9_v1_chr2_+_151969288_151969344	1.90507	HIF1A.p2	U18658|Tcf15|21407|transcription factor 15	BC027533|Tcf15|21407|transcription factor 15	NM_009328|Tcf15|21407|transcription factor 15
mm9_v1_chr17_+_66472859_66472952	1.90203	HIF1A.p2	BC079656|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	NM_001003919|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK076357|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK049419|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK152868|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)
mm9_v1_chr13_-_113442508_113442517	1.89887	HIF1A.p2	AK014844|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK133366|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001145885|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_010029|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
mm9_v1_chr1_-_122161827_122161860	1.8979	HIF1A.p2	AK003108|Steap3|68428|STEAP family member 3	AK028961|Steap3|68428|STEAP family member 3	AY029586|Steap3|68428|STEAP family member 3	BC027251|Steap3|68428|STEAP family member 3	BC037435|Steap3|68428|STEAP family member 3	NM_133186|Steap3|68428|STEAP family member 3	AK171237|Steap3|68428|STEAP family member 3
mm9_v1_chrX_+_159198302_159198437	1.88552	HIF1A.p2	NM_009031|Rbbp7|245688|retinoblastoma binding protein 7	AK146439|Rbbp7|245688|retinoblastoma binding protein 7	AK147062|Rbbp7|245688|retinoblastoma binding protein 7	AK153913|Rbbp7|245688|retinoblastoma binding protein 7	AK148852|Rbbp7|245688|retinoblastoma binding protein 7	U35142|Rbbp7|245688|retinoblastoma binding protein 7	BC003785|Rbbp7|245688|retinoblastoma binding protein 7	AK076016|Rbbp7|245688|retinoblastoma binding protein 7	AK135779|Rbbp7|245688|retinoblastoma binding protein 7	AK135956|Rbbp7|245688|retinoblastoma binding protein 7	AK078349|Rbbp7|245688|retinoblastoma binding protein 7	AK082892|Rbbp7|245688|retinoblastoma binding protein 7	AK136110|Rbbp7|245688|retinoblastoma binding protein 7	AK145531|Rbbp7|245688|retinoblastoma binding protein 7	AK146014|Rbbp7|245688|retinoblastoma binding protein 7	AK146904|Rbbp7|245688|retinoblastoma binding protein 7	AK146967|Rbbp7|245688|retinoblastoma binding protein 7	AK160023|Rbbp7|245688|retinoblastoma binding protein 7	AK132101|Rbbp7|245688|retinoblastoma binding protein 7	AK145651|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr7_-_108986297_108986435	1.88421	HIF1A.p2	AK133359|Inppl1|16332|inositol polyphosphate phosphatase-like 1	AK149873|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_001122739|Inppl1|16332|inositol polyphosphate phosphatase-like 1	BC063080|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr11_-_78364173_78364273	1.88319	HIF1A.p2	BC093511|Tmem97|69071|transmembrane protein 97	AK171954|Tmem97|69071|transmembrane protein 97	BC018156|Tmem97|69071|transmembrane protein 97	NM_133706|Tmem97|69071|transmembrane protein 97	AK155107|Tmem97|69071|transmembrane protein 97
mm9_v1_chr8_+_77517536_77517607	1.88251	HIF1A.p2	AK156670|Hmgxb4|70823|HMG box domain containing 4	AK014640|Hmgxb4|70823|HMG box domain containing 4	BC048188|Hmgxb4|70823|HMG box domain containing 4	BC049800|Hmgxb4|70823|HMG box domain containing 4	NM_178017|Hmgxb4|70823|HMG box domain containing 4	BC023721|Hmgxb4|70823|HMG box domain containing 4
mm9_v1_chr9_-_106340536_106340558	1.88101	HIF1A.p2	AK002423|Acy1|109652|aminoacylase 1	BC005631|Acy1|109652|aminoacylase 1
mm9_v1_chr9_-_44226073_44226112	1.8808	HIF1A.p2	BC096560|Ccdc84|382073|coiled-coil domain containing 84	BC055929|Ccdc84|382073|coiled-coil domain containing 84	NM_201372|Ccdc84|382073|coiled-coil domain containing 84	AK171754|Ccdc84|382073|coiled-coil domain containing 84	AK052757|Ccdc84|382073|coiled-coil domain containing 84	BC116877|Ccdc84|382073|coiled-coil domain containing 84	BC116879|Ccdc84|382073|coiled-coil domain containing 84	BC144712|Ccdc84|382073|coiled-coil domain containing 84	BC144713|Ccdc84|382073|coiled-coil domain containing 84
mm9_v1_chr1_-_188573165_188573236	1.87732	HIF1A.p2	AK007616|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013217|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	BC006787|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK010658|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK087997|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013204|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK169088|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	NM_026041|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)
mm9_v1_chr19_+_18787654_18787754	1.87496	HIF1A.p2	AK145019|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK155389|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK083631|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	NM_177640|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	BC020125|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene
mm9_v1_chr12_-_28027272_28027439	1.87487	HIF1A.p2	AB108675|Sox11|20666|SRY-box containing gene 11	BC062095|Sox11|20666|SRY-box containing gene 11	BC053503|Sox11|20666|SRY-box containing gene 11
mm9_v1_chr7_-_52347489_52347600	1.87447	HIF1A.p2	BC092069|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK077943|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK082762|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK086705|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK132143|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC025602|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC055903|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	NM_026555|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain
mm9_v1_chr16_+_36071694_36071777	1.87019	HIF1A.p2	AK144564|Ccdc58|381045|coiled-coil domain containing 58	NM_001159421|Ccdc58|381045|coiled-coil domain containing 58	NM_198645|Ccdc58|381045|coiled-coil domain containing 58	BC024862|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr1_+_61685397_61685574	1.86535	HIF1A.p2	AK013352|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	NM_001081050|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK051398|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK031487|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK141451|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)	AK008055|Pard3b|72823|par-3 partitioning defective 3 homolog B (C. elegans)
mm9_v1_chr11_-_82684653_82684724	1.86371	HIF1A.p2	AK159442|Rffl|67338|ring finger and FYVE like domain containing protein	AK150541|Rffl|67338|ring finger and FYVE like domain containing protein	AK169988|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001007465|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164569|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164571|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr18_+_67801208_67801282	1.85473	HIF1A.p2	AB031387|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK006069|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	NM_134138|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK167840|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK135578|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK077569|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	BC016606|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2
mm9_v1_chr8_+_3631116_3631169	1.84969	HIF1A.p2	AK088364|Stxbp2|20911|syntaxin binding protein 2	BC008102|Stxbp2|20911|syntaxin binding protein 2	U19520|Stxbp2|20911|syntaxin binding protein 2	AF263345|Stxbp2|20911|syntaxin binding protein 2	AK133419|Stxbp2|20911|syntaxin binding protein 2	NM_011503|Stxbp2|20911|syntaxin binding protein 2	D42068|Stxbp2|20911|syntaxin binding protein 2	BC003477|Stxbp2|20911|syntaxin binding protein 2
mm9_v1_chr17_+_46787285_46787649	1.8487	HIF1A.p2	AK155583|Cul7|66515|cullin 7	AK170580|Cul7|66515|cullin 7	NM_025611|Cul7|66515|cullin 7	AK082134|Cul7|66515|cullin 7	BC138998|Cul7|66515|cullin 7	BC139000|Cul7|66515|cullin 7	AK166135|Cul7|66515|cullin 7	AK170808|Cul7|66515|cullin 7	AK155454|Cul7|66515|cullin 7	AK144856|Cul7|66515|cullin 7	AK147156|Cul7|66515|cullin 7	AK147905|Cul7|66515|cullin 7
mm9_v1_chr3_-_65196395_65196552	1.84786	HIF1A.p2	AK192841|Ssr3|67437|signal sequence receptor, gamma	AK194871|Ssr3|67437|signal sequence receptor, gamma	AK199053|Ssr3|67437|signal sequence receptor, gamma	AK206034|Ssr3|67437|signal sequence receptor, gamma	BC020335|Ssr3|67437|signal sequence receptor, gamma	CT010172|Ssr3|67437|signal sequence receptor, gamma	AK150255|Ssr3|67437|signal sequence receptor, gamma	AK002818|Ssr3|67437|signal sequence receptor, gamma	AK029353|Ssr3|67437|signal sequence receptor, gamma	NM_026155|Ssr3|67437|signal sequence receptor, gamma	AK088555|Ssr3|67437|signal sequence receptor, gamma	BC011111|Ssr3|67437|signal sequence receptor, gamma	AK076235|Ssr3|67437|signal sequence receptor, gamma
mm9_v1_chr14_-_119105434_119105469	1.84741	HIF1A.p2	NM_001033336|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	NM_001163676|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm9_v1_chr10_-_59414516_59414582	1.84502	HIF1A.p2	BC131992|Ddit4|74747|DNA-damage-inducible transcript 4	BC132645|Ddit4|74747|DNA-damage-inducible transcript 4	BC145370|Ddit4|74747|DNA-damage-inducible transcript 4	AK017926|Ddit4|74747|DNA-damage-inducible transcript 4	NM_029083|Ddit4|74747|DNA-damage-inducible transcript 4	AK081046|Ddit4|74747|DNA-damage-inducible transcript 4
mm9_v1_chr19_+_11986907_11986958	1.84113	HIF1A.p2	AK087559|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK170745|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK170408|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK154873|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	AK085013|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)	BC058941|Patl1|225929|protein associated with topoisomerase II homolog 1 (yeast)
mm9_v1_chr11_+_78156930_78157077	1.82966	HIF1A.p2	AF030169|Unc119|22248|unc-119 homolog (C. elegans)	AK131955|Unc119|22248|unc-119 homolog (C. elegans)	BC001990|Unc119|22248|unc-119 homolog (C. elegans)	NM_011676|Unc119|22248|unc-119 homolog (C. elegans)
mm9_v1_chr6_+_146837012_146837178	1.82938	HIF1A.p2	NM_001170433|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	NM_026221|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK146575|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC072603|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK154482|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	AK173133|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)	BC035209|Ppfibp1|67533|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm9_v1_chr6_+_17643923_17644228	1.82791	HIF1A.p2	BC024652|St7|64213|suppression of tumorigenicity 7	AY007792|St7|64213|suppression of tumorigenicity 7	AY007793|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr14_-_73109609_73109649	1.82516	HIF1A.p2	BC144880|Fndc3a|319448|fibronectin type III domain containing 3A	AK154756|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr1_+_141318927_141318961	1.82499	HIF1A.p2	NM_172643|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog	AK036544|Zbtb41|226470|zinc finger and BTB domain containing 41 homolog
mm9_v1_chrX_+_136145321_136145344	1.82475	HIF1A.p2	AF426411|Rnf128|66889|ring finger protein 128
mm9_v1_chr2_-_120966376_120966433	1.82463	HIF1A.p2	BC071272|Lcmt2|329504|leucine carboxyl methyltransferase 2	AK172970|Lcmt2|329504|leucine carboxyl methyltransferase 2	AK084642|Lcmt2|329504|leucine carboxyl methyltransferase 2	NM_177846|Lcmt2|329504|leucine carboxyl methyltransferase 2
mm9_v1_chr11_-_93829704_93829834	1.82148	HIF1A.p2	NM_008704|Nme1|18102|non-metastatic cells 1, protein (NM23A) expressed in
mm9_v1_chr10_+_50312445_50312544	1.81932	HIF1A.p2	AK144867|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	NM_001146089|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	NM_198007|Ascc3|77987|activating signal cointegrator 1 complex subunit 3	AK052745|Ascc3|77987|activating signal cointegrator 1 complex subunit 3
mm9_v1_chr7_-_4960310_4960406	1.81616	HIF1A.p2	AK003641|Fiz1|23877|Flt3 interacting zinc finger protein 1
mm9_v1_chr5_-_20387886_20387948	1.81002	HIF1A.p2	AK152951|Phtf2|68770|putative homeodomain transcription factor 2	AK035536|Phtf2|68770|putative homeodomain transcription factor 2	AK042382|Phtf2|68770|putative homeodomain transcription factor 2	NM_172992|Phtf2|68770|putative homeodomain transcription factor 2
mm9_v1_chr7_+_87171113_87171302	1.80838	HIF1A.p2	NM_175433|Zfp710|209225|zinc finger protein 710	AK155416|Zfp710|209225|zinc finger protein 710	BC060641|Zfp710|209225|zinc finger protein 710	AK083979|Zfp710|209225|zinc finger protein 710	BC058640|Zfp710|209225|zinc finger protein 710
mm9_v1_chr6_+_85401450_85401503	1.79985	HIF1A.p2	NM_007638|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)
mm9_v1_chr17_-_45710213_45710219	1.7995	HIF1A.p2	AK030768|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK084097|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK135366|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK146205|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr6_-_100237331_100237351	1.79939	HIF1A.p2	BC138324|Rybp|56353|RING1 and YY1 binding protein	BC138325|Rybp|56353|RING1 and YY1 binding protein	BC053016|Rybp|56353|RING1 and YY1 binding protein	NM_019743|Rybp|56353|RING1 and YY1 binding protein
mm9_v1_chr11_-_109472715_109472760	1.79872	HIF1A.p2	AK159608|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK170563|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK034907|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1
mm9_v1_chr2_+_118752232_118752411	1.79715	HIF1A.p2	NM_028117|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154555|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK155115|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC043700|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154636|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK159357|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK011230|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC085479|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK171614|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC026886|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm9_v1_chr10_+_79579074_79579091	1.79511	HIF1A.p2	AK147802|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr11_+_64792527_64792682	1.79412	HIF1A.p2	AK156730|Elac2|68626|elaC homolog 2 (E. coli)	NM_023479|Elac2|68626|elaC homolog 2 (E. coli)	AK172604|Elac2|68626|elaC homolog 2 (E. coli)	BC023134|Elac2|68626|elaC homolog 2 (E. coli)	AF308696|Elac2|68626|elaC homolog 2 (E. coli)	BC048235|Elac2|68626|elaC homolog 2 (E. coli)
mm9_v1_chr8_-_64238814_64238834	1.79305	HIF1A.p2	AK173081|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr11_-_93746982_93747028	1.78892	HIF1A.p2	AK154637|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)	AK032265|Utp18|217109|UTP18, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr15_-_97662101_97662197	1.78211	HIF1A.p2	BC057332|Hdac7|56233|histone deacetylase 7	NM_019572|Hdac7|56233|histone deacetylase 7	AY943912|Hdac7|56233|histone deacetylase 7
mm9_v1_chr9_+_98197001_98197080	1.78032	HIF1A.p2	BC005737|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	NM_144533|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK040783|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041526|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041897|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr8_-_109417431_109417531	1.78018	HIF1A.p2	AK030924|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK165993|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	NM_145412|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK087721|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK088257|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
mm9_v1_chr8_+_122434697_122434814	1.77897	HIF1A.p2	AK077453|Usp10|22224|ubiquitin specific peptidase 10	AK157970|Usp10|22224|ubiquitin specific peptidase 10	AK165156|Usp10|22224|ubiquitin specific peptidase 10	AK172443|Usp10|22224|ubiquitin specific peptidase 10	AK137015|Usp10|22224|ubiquitin specific peptidase 10	AK166243|Usp10|22224|ubiquitin specific peptidase 10	AK129083|Usp10|22224|ubiquitin specific peptidase 10	BC007134|Usp10|22224|ubiquitin specific peptidase 10	D84096|Usp10|22224|ubiquitin specific peptidase 10	NM_009462|Usp10|22224|ubiquitin specific peptidase 10	AK179830|Usp10|22224|ubiquitin specific peptidase 10
mm9_v1_chr11_+_69778998_69779009	1.77774	HIF1A.p2	BC110485|Cldn7|53624|claudin 7	AK002924|Cldn7|53624|claudin 7	AK010558|Cldn7|53624|claudin 7	AK167250|Cldn7|53624|claudin 7	AK087296|Cldn7|53624|claudin 7	BC050007|Cldn7|53624|claudin 7
mm9_v1_chr17_+_74738195_74738352	1.77356	HIF1A.p2	BC046286|Spast|50850|spastin	NM_001162870|Spast|50850|spastin	NM_016962|Spast|50850|spastin	AK129282|Spast|50850|spastin
mm9_v1_chr7_+_112885103_112885239	1.76407	HIF1A.p2	NM_001161724|Ilk|16202|integrin linked kinase	AK011766|Ilk|16202|integrin linked kinase	AK154207|Ilk|16202|integrin linked kinase	AK002344|Ilk|16202|integrin linked kinase	NM_010562|Ilk|16202|integrin linked kinase
mm9_v1_chr2_+_78709195_78709267	1.76333	HIF1A.p2	BC011477|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	NM_009454|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr13_-_94269673_94269706	1.76289	HIF1A.p2	BC020052|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr17_-_81464406_81464435	1.7574	HIF1A.p2	AK012806|Thumpd2|72167|THUMP domain containing 2	NM_028138|Thumpd2|72167|THUMP domain containing 2
mm9_v1_chr9_-_106340564_106340582	1.75301	HIF1A.p2	AK003703|Acy1|109652|aminoacylase 1	NM_025371|Acy1|109652|aminoacylase 1
mm9_v1_chr8_+_11556495_11556521	1.74451	HIF1A.p2	BC016573|Ing1|26356|inhibitor of growth family, member 1
mm9_v1_chr9_+_102737229_102737361	1.74394	HIF1A.p2	L21707|Ryk|20187|receptor-like tyrosine kinase	NM_001042607|Ryk|20187|receptor-like tyrosine kinase	NM_013649|Ryk|20187|receptor-like tyrosine kinase	L02210|Ryk|20187|receptor-like tyrosine kinase	M98547|Ryk|20187|receptor-like tyrosine kinase	AK144355|Ryk|20187|receptor-like tyrosine kinase	L38394|Ryk|20187|receptor-like tyrosine kinase
mm9_v1_chr8_+_90661746_90661852	1.74227	HIF1A.p2	AK047782|Heatr3|234549|HEAT repeat containing 3	AK052635|Heatr3|234549|HEAT repeat containing 3	AK165541|Heatr3|234549|HEAT repeat containing 3	AK140522|Heatr3|234549|HEAT repeat containing 3	AK136424|Heatr3|234549|HEAT repeat containing 3	AK134510|Heatr3|234549|HEAT repeat containing 3	BC065060|Heatr3|234549|HEAT repeat containing 3	NM_172757|Heatr3|234549|HEAT repeat containing 3	AK163715|Heatr3|234549|HEAT repeat containing 3
mm9_v1_chr10_+_82323249_82323266	1.74035	HIF1A.p2	AK172383|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr11_-_84729844_84729889	1.73271	HIF1A.p2	BC089554|Znhit3|448850|zinc finger, HIT type 3	AK002888|Znhit3|448850|zinc finger, HIT type 3	AK003721|Znhit3|448850|zinc finger, HIT type 3	AK004259|Znhit3|448850|zinc finger, HIT type 3	NM_001005223|Znhit3|448850|zinc finger, HIT type 3	AK014350|Znhit3|448850|zinc finger, HIT type 3
mm9_v1_chr13_+_100114738_100114812	1.72978	HIF1A.p2	AK076008|Mrps27|218506|mitochondrial ribosomal protein S27	NM_173757|Mrps27|218506|mitochondrial ribosomal protein S27	AK087686|Mrps27|218506|mitochondrial ribosomal protein S27	BC049149|Mrps27|218506|mitochondrial ribosomal protein S27
mm9_v1_chr6_-_38249209_38249350	1.72499	HIF1A.p2	AK084475|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK045287|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK051064|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	NM_172467|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138180|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138181|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr7_-_30954705_30954770	1.72296	HIF1A.p2	AJ224763|Zfp146|26465|zinc finger protein 146	AK047696|Zfp146|26465|zinc finger protein 146	NM_011980|Zfp146|26465|zinc finger protein 146	AK037311|Zfp146|26465|zinc finger protein 146
mm9_v1_chr4_-_116480186_116480196	1.72133	HIF1A.p2	AK046576|Toe1|68276|target of EGR1, member 1 (nuclear)
mm9_v1_chr3_-_146184337_146184397	1.71037	HIF1A.p2	BC056165|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171035|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	BC089369|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK008988|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK171079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK010079|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027332|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	NM_027371|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)	AK162073|Rpf1|70285|ribosome production factor 1 homolog (S. cerevisiae)
mm9_v1_chr8_-_47085062_47085225	1.71021	HIF1A.p2	AK075868|Ankrd37|654824|ankyrin repeat domain 37	BC039642|Ankrd37|654824|ankyrin repeat domain 37	BC092377|Ankrd37|654824|ankyrin repeat domain 37	NM_001039562|Ankrd37|654824|ankyrin repeat domain 37	AK020869|Ankrd37|654824|ankyrin repeat domain 37
mm9_v1_chr5_+_137791368_137791732	1.70936	HIF1A.p2	AK143422|Ephb4|13846|Eph receptor B4	BC016505|Ephb4|13846|Eph receptor B4	AK046884|Ephb4|13846|Eph receptor B4	BC090839|Ephb4|13846|Eph receptor B4	U06834|Ephb4|13846|Eph receptor B4	BC013342|Ephb4|13846|Eph receptor B4
mm9_v1_chr18_-_35113903_35113993	1.70756	HIF1A.p2	AK002634|Hspa9|15526|heat shock protein 9	AK004946|Hspa9|15526|heat shock protein 9	AK137109|Hspa9|15526|heat shock protein 9	D17556|Hspa9|15526|heat shock protein 9	L06896|Hspa9|15526|heat shock protein 9	D11089|Hspa9|15526|heat shock protein 9
mm9_v1_chr14_-_31942057_31942124	1.70577	HIF1A.p2	AK036279|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK008341|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK019298|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK007443|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene
mm9_v1_chr4_+_123582074_123582311	1.69889	HIF1A.p2	BC048478|Mycbp|56309|c-myc binding protein	AK033289|Mycbp|56309|c-myc binding protein	AK077633|Mycbp|56309|c-myc binding protein	AK037661|Mycbp|56309|c-myc binding protein	AK077762|Mycbp|56309|c-myc binding protein	AK077995|Mycbp|56309|c-myc binding protein	AK145773|Mycbp|56309|c-myc binding protein	NM_019660|Mycbp|56309|c-myc binding protein	BC028344|Mycbp|56309|c-myc binding protein	AB015858|Mycbp|56309|c-myc binding protein
mm9_v1_chr9_-_121668905_121669060	1.69758	HIF1A.p2	AK089135|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK080675|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK158237|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK162861|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK149318|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene
mm9_v1_chr6_-_134516799_134516866	1.69603	HIF1A.p2	AF074265|Lrp6|16974|low density lipoprotein receptor-related protein 6
mm9_v1_chr15_+_73555186_73555261	1.69378	HIF1A.p2	AK004562|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr11_+_60230646_60230770	1.69205	HIF1A.p2	AK017120|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	NM_025757|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene	AK039435|4933439F18Rik|66771|RIKEN cDNA 4933439F18 gene
mm9_v1_chr17_+_24563575_24563652	1.6836	HIF1A.p2	AK004838|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	AK029481|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	NM_010023|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	AK077386|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	BC054444|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	BC022712|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	Z14049|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)
mm9_v1_chr6_-_89312545_89312689	1.67982	HIF1A.p2	D86948|Plxna1|18844|plexin A1	NM_008881|Plxna1|18844|plexin A1
mm9_v1_chr1_+_174430359_174430439	1.67935	HIF1A.p2	AK151576|Tagln2|21346|transgelin 2	NM_178598|Tagln2|21346|transgelin 2	AK167395|Tagln2|21346|transgelin 2	BC009076|Tagln2|21346|transgelin 2	AK167922|Tagln2|21346|transgelin 2	AF149291|Tagln2|21346|transgelin 2	AK171088|Tagln2|21346|transgelin 2	AK172892|Tagln2|21346|transgelin 2	AF465519|Tagln2|21346|transgelin 2
mm9_v1_chr12_+_110031153_110031195	1.67733	HIF1A.p2	AK166542|Yy1|22632|YY1 transcription factor
mm9_v1_chr15_-_97536251_97536289	1.67694	HIF1A.p2	AK009765|Rpap3|71919|RNA polymerase II associated protein 3	NM_028003|Rpap3|71919|RNA polymerase II associated protein 3	BC004046|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr15_+_85889141_85889301	1.6738	HIF1A.p2	BC085148|Gramd4|223752|GRAM domain containing 4	AK142266|Gramd4|223752|GRAM domain containing 4
mm9_v1_chr2_+_84667174_84667190	1.67192	HIF1A.p2	AK008088|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)	NM_013899|Timm10|30059|translocase of inner mitochondrial membrane 10 homolog (yeast)
mm9_v1_chr12_-_40763924_40763965	1.671	HIF1A.p2	BC029234|Arl4a|11861|ADP-ribosylation factor-like 4A	BC003725|Arl4a|11861|ADP-ribosylation factor-like 4A	AK168618|Arl4a|11861|ADP-ribosylation factor-like 4A	AK048606|Arl4a|11861|ADP-ribosylation factor-like 4A	AK137751|Arl4a|11861|ADP-ribosylation factor-like 4A	NM_007487|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr9_-_89599660_89599893	1.66978	HIF1A.p2	BC023338|Tmed3|66111|transmembrane emp24 domain containing 3	AK007544|Tmed3|66111|transmembrane emp24 domain containing 3	AK002698|Tmed3|66111|transmembrane emp24 domain containing 3	AK004545|Tmed3|66111|transmembrane emp24 domain containing 3	NM_025360|Tmed3|66111|transmembrane emp24 domain containing 3
mm9_v1_chr15_+_76287867_76288031	1.66779	HIF1A.p2	NM_198885|Scx|20289|scleraxis	S78079|Scx|20289|scleraxis	AK013456|Scx|20289|scleraxis	BC062161|Scx|20289|scleraxis	AB221642|Scx|20289|scleraxis
mm9_v1_chr8_-_26149352_26149433	1.66646	HIF1A.p2	AK046614|Htra4|330723|HtrA serine peptidase 4	BC132380|Htra4|330723|HtrA serine peptidase 4	BC145842|Htra4|330723|HtrA serine peptidase 4	NM_001081187|Htra4|330723|HtrA serine peptidase 4
mm9_v1_chr11_-_82684643_82684651	1.66326	HIF1A.p2	AK150213|Rffl|67338|ring finger and FYVE like domain containing protein	AK169393|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr10_+_79579271_79579362	1.66318	HIF1A.p2	BC052379|Stk11|20869|serine/threonine kinase 11	NM_011492|Stk11|20869|serine/threonine kinase 11	AB015801|Stk11|20869|serine/threonine kinase 11	AF145287|Stk11|20869|serine/threonine kinase 11	AF151711|Stk11|20869|serine/threonine kinase 11	EU730638|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr2_-_168781086_168781086	1.66214	HIF1A.p2	NM_009564|Zfp64|22722|zinc finger protein 64
mm9_v1_chr12_+_106923552_106923650	1.66088	HIF1A.p2	NM_178613|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK171097|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	BC031494|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK168962|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK042664|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK079775|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK020785|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK029484|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene
mm9_v1_chr12_+_106270857_106270981	1.6608	HIF1A.p2	BC050937|Glrx5|73046|glutaredoxin 5 homolog (S. cerevisiae)	BC058371|Glrx5|73046|glutaredoxin 5 homolog (S. cerevisiae)	AK009158|Glrx5|73046|glutaredoxin 5 homolog (S. cerevisiae)	AK013761|Glrx5|73046|glutaredoxin 5 homolog (S. cerevisiae)	NM_028419|Glrx5|73046|glutaredoxin 5 homolog (S. cerevisiae)	AK050883|Glrx5|73046|glutaredoxin 5 homolog (S. cerevisiae)	DQ083330|Glrx5|73046|glutaredoxin 5 homolog (S. cerevisiae)
mm9_v1_chr2_+_26442112_26442158	1.64927	HIF1A.p2	NM_001164564|Egfl7|353156|EGF-like domain 7	AK139377|Egfl7|353156|EGF-like domain 7
mm9_v1_chr6_-_28211600_28211600	1.64696	HIF1A.p2	BC119236|Zfp800|627049|zinc finger protein 800	BC119262|Zfp800|627049|zinc finger protein 800	BC144761|Zfp800|627049|zinc finger protein 800	NM_001081678|Zfp800|627049|zinc finger protein 800
mm9_v1_chr9_+_95758015_95758123	1.63817	HIF1A.p2	AK157757|Atr|245000|ataxia telangiectasia and Rad3 related	NM_019864|Atr|245000|ataxia telangiectasia and Rad3 related	AK139834|Atr|245000|ataxia telangiectasia and Rad3 related	AK142244|Atr|245000|ataxia telangiectasia and Rad3 related	AK162661|Atr|245000|ataxia telangiectasia and Rad3 related	AK157754|Atr|245000|ataxia telangiectasia and Rad3 related	AK030118|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene	AK171072|Atr|245000|ataxia telangiectasia and Rad3 related	AK170039|Atr|245000|ataxia telangiectasia and Rad3 related	AK135538|Atr|245000|ataxia telangiectasia and Rad3 related
mm9_v1_chrX_-_91368238_91368406	1.63781	HIF1A.p2	M32309|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr6_-_47998112_47998112	1.63466	HIF1A.p2	NM_001081382|Zfp777|72306|zinc finger protein 777
mm9_v1_chr15_+_76173936_76173991	1.63422	HIF1A.p2	AK011288|Cyc1|66445|cytochrome c-1	NM_025567|Cyc1|66445|cytochrome c-1	AK151299|Cyc1|66445|cytochrome c-1	AK170272|Cyc1|66445|cytochrome c-1	BC005620|Cyc1|66445|cytochrome c-1	AK002815|Cyc1|66445|cytochrome c-1	BC082790|Cyc1|66445|cytochrome c-1
mm9_v1_chr2_+_17986187_17986431	1.63049	HIF1A.p2	AK154320|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC055298|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK147388|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	BC069988|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AF010135|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK220504|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	AK045042|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr11_-_101327431_101327547	1.62782	HIF1A.p2	BC085504|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159310|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC025496|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK170371|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	BC099678|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154965|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK154178|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK159315|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK160891|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK034795|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK155342|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	NM_012037|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)	AK145193|Vat1|26949|vesicle amine transport protein 1 homolog (T californica)
mm9_v1_chr18_+_60685851_60685863	1.6239	HIF1A.p2	AK163240|Dctn4|67665|dynactin 4
mm9_v1_chrX_+_10294490_10294637	1.62301	HIF1A.p2	NM_001166635|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	NM_026524|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK160062|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK090003|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK159166|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK172143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC004014|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC052899|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK151153|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr2_+_80155828_80155945	1.62128	HIF1A.p2	AK169020|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK165652|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK128945|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK004617|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK028184|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	BC033461|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK166502|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AK013930|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	AF255459|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr2_-_84555162_84555500	1.61562	HIF1A.p2	BC065155|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK082513|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK145086|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AK173251|Zdhhc5|228136|zinc finger, DHHC domain containing 5	AY894891|Zdhhc5|228136|zinc finger, DHHC domain containing 5	NM_144887|Zdhhc5|228136|zinc finger, DHHC domain containing 5
mm9_v1_chr14_+_54878898_54878980	1.60874	HIF1A.p2	AK152595|Abhd4|105501|abhydrolase domain containing 4	AK049366|Abhd4|105501|abhydrolase domain containing 4	AK164655|Abhd4|105501|abhydrolase domain containing 4	AK161853|Abhd4|105501|abhydrolase domain containing 4	BC017532|Abhd4|105501|abhydrolase domain containing 4	NM_134076|Abhd4|105501|abhydrolase domain containing 4
mm9_v1_chr10_-_79862025_79862166	1.60799	HIF1A.p2	BC038264|Mbd3|17192|methyl-CpG binding domain protein 3
mm9_v1_chr7_-_75893927_75894127	1.60612	HIF1A.p2	DQ861996|Arrdc4|66412|arrestin domain containing 4	BC017528|Arrdc4|66412|arrestin domain containing 4	AK010022|Arrdc4|66412|arrestin domain containing 4	AK037198|Arrdc4|66412|arrestin domain containing 4	NM_001042592|Arrdc4|66412|arrestin domain containing 4	NM_025549|Arrdc4|66412|arrestin domain containing 4	AK010352|Arrdc4|66412|arrestin domain containing 4
mm9_v1_chr7_-_108986589_108986739	1.6054	HIF1A.p2	AF162781|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_010567|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr9_+_75289299_75289376	1.60533	HIF1A.p2	BC082540|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_001039522|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC083358|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK153933|Leo1|235497|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr5_-_124804583_124804698	1.60485	HIF1A.p2	BC083075|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	NM_013812|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	AK004852|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr3_+_67386633_67386754	1.60354	HIF1A.p2	AK075859|Mfsd1|66868|major facilitator superfamily domain containing 1	AK159554|Mfsd1|66868|major facilitator superfamily domain containing 1	AK152444|Mfsd1|66868|major facilitator superfamily domain containing 1	AK135235|Mfsd1|66868|major facilitator superfamily domain containing 1	NM_025813|Mfsd1|66868|major facilitator superfamily domain containing 1	AK004586|Mfsd1|66868|major facilitator superfamily domain containing 1	AK136108|Mfsd1|66868|major facilitator superfamily domain containing 1	AK166645|Mfsd1|66868|major facilitator superfamily domain containing 1	BC024891|Mfsd1|66868|major facilitator superfamily domain containing 1	AK032688|Mfsd1|66868|major facilitator superfamily domain containing 1
mm9_v1_chr12_+_117519658_117519785	1.60143	HIF1A.p2	AK044360|Esyt2|52635|extended synaptotagmin-like protein 2	NM_028731|Esyt2|52635|extended synaptotagmin-like protein 2	AK014813|Esyt2|52635|extended synaptotagmin-like protein 2	AK157352|Esyt2|52635|extended synaptotagmin-like protein 2	BC138937|Esyt2|52635|extended synaptotagmin-like protein 2
mm9_v1_chr2_+_18598644_18598801	1.59794	HIF1A.p2	M64279|Bmi1|12151|Bmi1 polycomb ring finger oncogene	NM_007552|Bmi1|12151|Bmi1 polycomb ring finger oncogene
mm9_v1_chr5_-_37139883_37139925	1.5951	HIF1A.p2	AK011795|Cno|117197|cappuccino	BC019169|Cno|117197|cappuccino	NM_133724|Cno|117197|cappuccino
mm9_v1_chr11_+_78075242_78075302	1.59317	HIF1A.p2	AK150829|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	NM_001002004|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC080706|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	AK149719|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC075633|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC019798|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr7_-_4397194_4397258	1.59258	HIF1A.p2	AK089458|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK034180|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	BC082583|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK028434|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	NM_175372|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)
mm9_v1_chr19_-_6141100_6141219	1.59106	HIF1A.p2	AF143680|Arl2|56327|ADP-ribosylation factor-like 2	BC052938|Arl2|56327|ADP-ribosylation factor-like 2	BC060259|Arl2|56327|ADP-ribosylation factor-like 2	AK011366|Arl2|56327|ADP-ribosylation factor-like 2	NM_019722|Arl2|56327|ADP-ribosylation factor-like 2	BC080803|Arl2|56327|ADP-ribosylation factor-like 2
mm9_v1_chr5_-_92739036_92739049	1.58625	HIF1A.p2	AK029881|Sdad1|231452|SDA1 domain containing 1	NM_172713|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr2_+_31325818_31325829	1.58528	HIF1A.p2	AK149489|Ass1|11898|argininosuccinate synthetase 1	AK146635|Ass1|11898|argininosuccinate synthetase 1
mm9_v1_chr2_-_35192443_35192541	1.582	HIF1A.p2	AF093620|Stom|13830|stomatin	BC003789|Stom|13830|stomatin	AK149821|Stom|13830|stomatin	AK151129|Stom|13830|stomatin	AK077435|Stom|13830|stomatin	AK139242|Stom|13830|stomatin	AK143724|Stom|13830|stomatin	AK148975|Stom|13830|stomatin	AK149689|Stom|13830|stomatin	AK149991|Stom|13830|stomatin	NM_013515|Stom|13830|stomatin	U17297|Stom|13830|stomatin
mm9_v1_chrX_+_20002809_20002842	1.58172	HIF1A.p2	BC065070|Phf16|382207|PHD finger protein 16
mm9_v1_chr10_-_121063321_121063512	1.57971	HIF1A.p2	NM_001081056|Xpot|73192|exportin, tRNA (nuclear export receptor for tRNAs)
mm9_v1_chr7_-_53086135_53086313	1.57821	HIF1A.p2	BC008121|Grwd1|101612|glutamate-rich WD repeat containing 1	BC083143|Grwd1|101612|glutamate-rich WD repeat containing 1	BC028896|Grwd1|101612|glutamate-rich WD repeat containing 1	NM_153419|Grwd1|101612|glutamate-rich WD repeat containing 1	AK077611|Grwd1|101612|glutamate-rich WD repeat containing 1	AB001539|Grwd1|101612|glutamate-rich WD repeat containing 1
mm9_v1_chr16_-_78576898_78576912	1.57639	HIF1A.p2	AK009258|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed	NM_025967|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr13_+_81796756_81796839	1.57195	HIF1A.p2	BC003322|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	NM_030257|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3	AK029514|Lysmd3|80289|LysM, putative peptidoglycan-binding, domain containing 3
mm9_v1_chr1_-_153937097_153937320	1.57037	HIF1A.p2	AK167392|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC034723|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene	BC055912|1700025G04Rik|69399|RIKEN cDNA 1700025G04 gene
mm9_v1_chr2_-_25221101_25221190	1.56909	HIF1A.p2	BC043307|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077912|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK151942|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	NM_001033293|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK149178|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK168977|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK159787|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077550|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	BC130030|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
mm9_v1_chr16_+_92058498_92058582	1.56665	HIF1A.p2	AK165590|Mrps6|121022|mitochondrial ribosomal protein S6	AB049943|Mrps6|121022|mitochondrial ribosomal protein S6	AY061856|Mrps6|121022|mitochondrial ribosomal protein S6	AK144718|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK166374|Mrps6|121022|mitochondrial ribosomal protein S6	AK167304|Mrps6|121022|mitochondrial ribosomal protein S6	NM_017391|Slc5a3|53881|solute carrier family 5 (inositol transporters), member 3	AK167316|Mrps6|121022|mitochondrial ribosomal protein S6	BC027271|Mrps6|121022|mitochondrial ribosomal protein S6	NM_080456|Mrps6|121022|mitochondrial ribosomal protein S6
mm9_v1_chr6_+_86315639_86315728	1.56509	HIF1A.p2	BC103775|Fam136a|66488|family with sequence similarity 136, member A	BC024049|Fam136a|66488|family with sequence similarity 136, member A	NM_025591|Fam136a|66488|family with sequence similarity 136, member A	AK008550|Fam136a|66488|family with sequence similarity 136, member A	AK005280|Fam136a|66488|family with sequence similarity 136, member A	AK141279|Fam136a|66488|family with sequence similarity 136, member A	CT010180|Fam136a|66488|family with sequence similarity 136, member A	BC013621|Fam136a|66488|family with sequence similarity 136, member A
mm9_v1_chr19_+_6057884_6057982	1.55767	HIF1A.p2	NM_001160239|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	NM_007990|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK132752|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK002355|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK151211|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK151465|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK152738|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK168348|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	D26610|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	AK146359|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC062873|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	X65922|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	NM_001190436|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC058691|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	BC081463|Fau|14109|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)
mm9_v1_chr11_+_53164267_53164268	1.55753	HIF1A.p2	NM_033565|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr7_+_129210948_129210953	1.55226	HIF1A.p2	AK135258|Ubfd1|28018|ubiquitin family domain containing 1	AK140891|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr7_-_36340213_36340340	1.55175	HIF1A.p2	AK179860|Nudt19|110959|nudix (nucleoside diphosphate linked moiety X)-type motif 19	AK183336|Nudt19|110959|nudix (nucleoside diphosphate linked moiety X)-type motif 19
mm9_v1_chr4_-_116793851_116793888	1.54764	HIF1A.p2	AK020599|Btbd19|78611|BTB (POZ) domain containing 19
mm9_v1_chr13_+_55694491_55694540	1.54137	HIF1A.p2	NM_026211|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK012474|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK152496|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK152581|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK153383|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK010259|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	AK169001|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC049282|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC058801|Tmed9|67511|transmembrane emp24 protein transport domain containing 9	BC004691|Tmed9|67511|transmembrane emp24 protein transport domain containing 9
mm9_v1_chr19_-_8955377_8955422	1.53876	HIF1A.p2	AK131892|AI462493|107197|expressed sequence AI462493	AY941793|AI462493|107197|expressed sequence AI462493	AK131602|AI462493|107197|expressed sequence AI462493	AK132116|AI462493|107197|expressed sequence AI462493	NM_001160356|AI462493|107197|expressed sequence AI462493
mm9_v1_chr11_+_3189157_3189283	1.53772	HIF1A.p2	AK018372|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC055947|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr12_-_36219651_36219745	1.5318	HIF1A.p2	AK153678|Ahr|11622|aryl-hydrocarbon receptor	NM_013464|Ahr|11622|aryl-hydrocarbon receptor	AK155380|Ahr|11622|aryl-hydrocarbon receptor
mm9_v1_chr16_+_17797405_17797532	1.52984	HIF1A.p2	AB024432|Scarf2|224024|scavenger receptor class F, member 2	AK142378|Scarf2|224024|scavenger receptor class F, member 2	BC139758|Scarf2|224024|scavenger receptor class F, member 2	BC059226|Scarf2|224024|scavenger receptor class F, member 2	BC060084|Scarf2|224024|scavenger receptor class F, member 2	AK143208|Scarf2|224024|scavenger receptor class F, member 2
mm9_v1_chr6_+_125311859_125312178	1.52913	HIF1A.p2	AK190321|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a
mm9_v1_chr7_+_112885261_112885270	1.52372	HIF1A.p2	U94479|Ilk|16202|integrin linked kinase
mm9_v1_chr8_-_122082604_122082665	1.52174	HIF1A.p2	AK147336|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC011533|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	BC057198|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK029048|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	AK147495|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_001167910|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1	NM_019709|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr11_-_77303157_77303183	1.52002	HIF1A.p2	BC151158|Ankrd13b|268445|ankyrin repeat domain 13b	BC172028|Ankrd13b|268445|ankyrin repeat domain 13b	NM_172945|Ankrd13b|268445|ankyrin repeat domain 13b
mm9_v1_chr9_-_26613989_26614018	1.51486	HIF1A.p2	AK143057|Glb1l2|244757|galactosidase, beta 1-like 2	BC038479|Glb1l2|244757|galactosidase, beta 1-like 2	NM_153803|Glb1l2|244757|galactosidase, beta 1-like 2	AK033400|Glb1l2|244757|galactosidase, beta 1-like 2
mm9_v1_chr17_-_33822327_33822413	1.51478	HIF1A.p2	BC035525|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK159848|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	BC017539|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	BC065172|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK168347|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK133911|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK166670|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK169101|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK171892|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK145343|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK011521|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK051976|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	AK220299|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	NM_001109913|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M	NM_029804|Hnrnpm|76936|heterogeneous nuclear ribonucleoprotein M
mm9_v1_chr18_-_67800968_67801031	1.51117	HIF1A.p2	NM_001081073|Cep76|225659|centrosomal protein 76
mm9_v1_chr19_+_47253626_47253646	1.51015	HIF1A.p2	AK010787|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr19_-_8955326_8955347	1.50949	HIF1A.p2	BC029863|AI462493|107197|expressed sequence AI462493
mm9_v1_chr1_+_62749850_62750115	1.50599	HIF1A.p2	NM_001077403|Nrp2|18187|neuropilin 2	NM_001077404|Nrp2|18187|neuropilin 2	NM_001077405|Nrp2|18187|neuropilin 2	NM_001077406|Nrp2|18187|neuropilin 2	NM_001077407|Nrp2|18187|neuropilin 2	NM_010939|Nrp2|18187|neuropilin 2	AK149643|Nrp2|18187|neuropilin 2	AK051873|Nrp2|18187|neuropilin 2
mm9_v1_chr10_+_82323313_82323353	1.50035	HIF1A.p2	BC020274|Txnrd1|50493|thioredoxin reductase 1	AK177272|Txnrd1|50493|thioredoxin reductase 1	AK180432|Txnrd1|50493|thioredoxin reductase 1	AK184063|Txnrd1|50493|thioredoxin reductase 1	AK185936|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr15_-_88564636_88564674	1.49729	HIF1A.p2	NM_001033274|Brd1|223770|bromodomain containing 1	AK149714|Brd1|223770|bromodomain containing 1
mm9_v1_chr13_-_94269616_94269653	1.4969	HIF1A.p2	BC069906|Jmy|57748|junction-mediating and regulatory protein	BC090835|Jmy|57748|junction-mediating and regulatory protein	NM_021310|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr5_-_124804519_124804530	1.49363	HIF1A.p2	BC147052|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1	BC147053|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr11_+_102050933_102051034	1.49016	HIF1A.p2	AK002966|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	BC069959|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	NM_175935|G6pc3|68401|glucose 6 phosphatase, catalytic, 3
mm9_v1_chr9_+_69837253_69837421	1.4888	HIF1A.p2	AK169609|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK054288|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	NM_016787|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK159745|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK014659|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK161116|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	BC012670|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AF035207|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr13_+_35833181_35833351	1.48672	HIF1A.p2	BC062123|Cdyl|12593|chromodomain protein, Y chromosome-like	AK156509|Cdyl|12593|chromodomain protein, Y chromosome-like	NM_001123386|Cdyl|12593|chromodomain protein, Y chromosome-like
mm9_v1_chr17_+_87362450_87362450	1.48362	HIF1A.p2	BC056363|Rhoq|104215|ras homolog gene family, member Q	NM_145491|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chrX_-_90877453_90877549	1.48141	HIF1A.p2	AK139486|Pola1|18968|polymerase (DNA directed), alpha 1	AK037836|Pola1|18968|polymerase (DNA directed), alpha 1	D13543|Pola1|18968|polymerase (DNA directed), alpha 1	BC138047|Pola1|18968|polymerase (DNA directed), alpha 1	D17384|Pola1|18968|polymerase (DNA directed), alpha 1	NM_008892|Pola1|18968|polymerase (DNA directed), alpha 1
mm9_v1_chr12_-_103196366_103196464	1.47442	HIF1A.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr8_-_72758007_72758039	1.46953	HIF1A.p2	AK080609|Armc6|76813|armadillo repeat containing 6	AK049351|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr14_-_70843185_70843279	1.46805	HIF1A.p2	AK156587|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D	BC016102|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D	NM_025945|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D
mm9_v1_chr8_-_97437166_97437286	1.46473	HIF1A.p2	BC107374|Ccdc102a|234582|coiled-coil domain containing 102A	BC107375|Ccdc102a|234582|coiled-coil domain containing 102A	BC114992|Ccdc102a|234582|coiled-coil domain containing 102A
mm9_v1_chr18_-_14002490_14002628	1.46304	HIF1A.p2	BC023458|Zfp521|225207|zinc finger protein 521
mm9_v1_chr14_-_68551487_68551628	1.45856	HIF1A.p2	AK147975|Dock5|68813|dedicator of cytokinesis 5	BC158046|Dock5|68813|dedicator of cytokinesis 5	BC158135|Dock5|68813|dedicator of cytokinesis 5	BC158138|Dock5|68813|dedicator of cytokinesis 5	AK053909|Dock5|68813|dedicator of cytokinesis 5	NM_177780|Dock5|68813|dedicator of cytokinesis 5
mm9_v1_chr3_+_28704357_28704400	1.45561	HIF1A.p2	BC120716|Rpl22l1|68028|ribosomal protein L22 like 1	BC120718|Rpl22l1|68028|ribosomal protein L22 like 1
mm9_v1_chr2_-_131178551_131178627	1.45358	HIF1A.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr4_-_134323845_134323948	1.44952	HIF1A.p2	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chrX_-_151772899_151773055	1.44741	HIF1A.p2	AK014651|Prdx4|53381|peroxiredoxin 4	AK029349|Prdx4|53381|peroxiredoxin 4	BC003349|Prdx4|53381|peroxiredoxin 4	AK005031|Prdx4|53381|peroxiredoxin 4	AK015920|Prdx4|53381|peroxiredoxin 4	AK152255|Prdx4|53381|peroxiredoxin 4	AK146402|Prdx4|53381|peroxiredoxin 4	NM_016764|Prdx4|53381|peroxiredoxin 4	U96746|Prdx4|53381|peroxiredoxin 4	BC019578|Prdx4|53381|peroxiredoxin 4	AK157829|Prdx4|53381|peroxiredoxin 4	AK165551|Prdx4|53381|peroxiredoxin 4
mm9_v1_chr11_-_72303293_72303434	1.44591	HIF1A.p2	AB441166|Spns2|216892|spinster homolog 2 (Drosophila)	NM_153060|Spns2|216892|spinster homolog 2 (Drosophila)	BC011467|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr5_+_115956809_115956836	1.44474	HIF1A.p2	AK206113|Pxn|19303|paxillin	AK214527|Pxn|19303|paxillin
mm9_v1_chr7_-_52347012_52347061	1.44151	HIF1A.p2	BC005487|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain
mm9_v1_chr7_+_129210847_129210947	1.44091	HIF1A.p2	AK017851|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr6_+_18798568_18798703	1.43629	HIF1A.p2	BC019458|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	NM_133939|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK154446|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK008067|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK088664|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	AK167674|Naa38|76522|N(alpha)-acetyltransferase 38, NatC auxiliary subunit
mm9_v1_chrX_-_138824873_138824925	1.43475	HIF1A.p2	BC058663|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AB033885|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AB033886|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AB033887|Acsl4|50790|acyl-CoA synthetase long-chain family member 4	AJ243502|Acsl4|50790|acyl-CoA synthetase long-chain family member 4
mm9_v1_chr9_+_106105422_106105590	1.43463	HIF1A.p2	AK084026|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_011876|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK155204|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK166900|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC003338|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK170441|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK157886|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	Y17808|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AY267189|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)
mm9_v1_chr12_-_40764554_40764600	1.43423	HIF1A.p2	NM_001039515|Arl4a|11861|ADP-ribosylation factor-like 4A	AK161281|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr15_+_103103286_103103332	1.43416	HIF1A.p2	AK083824|Copz1|56447|coatomer protein complex, subunit zeta 1	AK168382|Copz1|56447|coatomer protein complex, subunit zeta 1	AK168471|Copz1|56447|coatomer protein complex, subunit zeta 1	AK079205|Copz1|56447|coatomer protein complex, subunit zeta 1	AK156758|Copz1|56447|coatomer protein complex, subunit zeta 1
mm9_v1_chr11_+_109224104_109224273	1.43395	HIF1A.p2	NM_010303|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK011851|Gna13|14674|guanine nucleotide binding protein, alpha 13	M63660|Gna13|14674|guanine nucleotide binding protein, alpha 13	AK149766|Gna13|14674|guanine nucleotide binding protein, alpha 13	BC057665|Gna13|14674|guanine nucleotide binding protein, alpha 13
mm9_v1_chr8_-_23508931_23508966	1.43164	HIF1A.p2	AF133914|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	BC061143|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK145966|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15	AK142223|Slc25a15|18408|solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
mm9_v1_chr15_-_97536204_97536244	1.43139	HIF1A.p2	AK169097|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr15_-_98364333_98364415	1.42614	HIF1A.p2	BC083325|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene
mm9_v1_chr4_-_9596206_9596308	1.42444	HIF1A.p2	BC015281|Asph|65973|aspartate-beta-hydroxylase	AF289486|Asph|65973|aspartate-beta-hydroxylase	AF289487|Asph|65973|aspartate-beta-hydroxylase	AF289488|Asph|65973|aspartate-beta-hydroxylase	AK030293|Asph|65973|aspartate-beta-hydroxylase	AK032420|Asph|65973|aspartate-beta-hydroxylase	AK151787|Asph|65973|aspartate-beta-hydroxylase	AK049506|Asph|65973|aspartate-beta-hydroxylase	AK139566|Asph|65973|aspartate-beta-hydroxylase	AK160984|Asph|65973|aspartate-beta-hydroxylase	AK165260|Asph|65973|aspartate-beta-hydroxylase	BC061098|Asph|65973|aspartate-beta-hydroxylase	NM_001177849|Asph|65973|aspartate-beta-hydroxylase	NM_001177850|Asph|65973|aspartate-beta-hydroxylase	NM_001177851|Asph|65973|aspartate-beta-hydroxylase	NM_001177855|Asph|65973|aspartate-beta-hydroxylase	NM_001177856|Asph|65973|aspartate-beta-hydroxylase	NM_023066|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr14_-_119105340_119105428	1.42391	HIF1A.p2	BC150822|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	BC171974|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	AK157723|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm9_v1_chr4_-_136512727_136512761	1.42234	HIF1A.p2	NM_007939|Epha8|13842|Eph receptor A8	U72207|Epha8|13842|Eph receptor A8
mm9_v1_chr5_+_76613120_76613173	1.4212	HIF1A.p2	BC141081|Tmem165|21982|transmembrane protein 165
mm9_v1_chr4_-_136391849_136391926	1.41979	HIF1A.p2	BC043088|Ephb2|13844|Eph receptor B2	NM_010142|Ephb2|13844|Eph receptor B2	BC062924|Ephb2|13844|Eph receptor B2	AK017630|Ephb2|13844|Eph receptor B2	L25890|Ephb2|13844|Eph receptor B2
mm9_v1_chr13_+_100877966_100878073	1.41855	HIF1A.p2	NM_011353|Serf1|20365|small EDRK-rich factor 1	AF073517|Serf1|20365|small EDRK-rich factor 1	BC028510|Serf1|20365|small EDRK-rich factor 1	AK012379|Serf1|20365|small EDRK-rich factor 1	AK005773|Serf1|20365|small EDRK-rich factor 1
mm9_v1_chr13_+_101421285_101421367	1.41731	HIF1A.p2	NM_027139|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_027592|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC042723|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK012905|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC019453|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC108348|Taf9|108143|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr19_-_4615180_4615322	1.41521	HIF1A.p2	BC023156|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr3_+_98944990_98945019	1.41342	HIF1A.p2	BC089583|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK036902|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK017602|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK042715|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK042964|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	NM_027462|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)	AK033774|Wars2|70560|tryptophanyl tRNA synthetase 2 (mitochondrial)
mm9_v1_chr14_+_56983847_56983904	1.41244	HIF1A.p2	BC109010|Atp12a|192113|ATPase, H+/K+ transporting, nongastric, alpha polypeptide	BC109011|Atp12a|192113|ATPase, H+/K+ transporting, nongastric, alpha polypeptide	NM_138652|Atp12a|192113|ATPase, H+/K+ transporting, nongastric, alpha polypeptide
mm9_v1_chr7_+_129210954_129210978	1.40986	HIF1A.p2	AK011862|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr2_+_69735301_69735369	1.40462	HIF1A.p2	DQ924536|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_001081548|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	NM_177783|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3	AK037622|Ubr3|68795|ubiquitin protein ligase E3 component n-recognin 3
mm9_v1_chr5_-_31210160_31210170	1.40147	HIF1A.p2	NM_024460|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr2_+_112219335_112219462	1.40122	HIF1A.p2	AK036861|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	NM_024254|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK168639|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK049599|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK151464|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK010654|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK152570|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC003216|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC012402|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC080661|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK162183|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene
mm9_v1_chr13_-_96295153_96295194	1.40017	HIF1A.p2	AX785009|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	Z48043|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	BC025432|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK144986|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK158462|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	AK160916|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1	NM_007974|F2rl1|14063|coagulation factor II (thrombin) receptor-like 1
mm9_v1_chr6_+_65729025_65729108	1.40009	HIF1A.p2	AK014501|Prdm5|70779|PR domain containing 5	AK200908|Prdm5|70779|PR domain containing 5
mm9_v1_chr5_+_125343060_125343124	1.39684	HIF1A.p2	AK143192|Zfp664|269704|zinc finger protein 664	AK086580|Zfp664|269704|zinc finger protein 664	AK039671|Zfp664|269704|zinc finger protein 664	NM_001081750|Zfp664|269704|zinc finger protein 664	AK165974|Zfp664|269704|zinc finger protein 664
mm9_v1_chr9_+_44205157_44205205	1.39546	HIF1A.p2	AK040077|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4	AK155339|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr16_+_36072143_36072202	1.39534	HIF1A.p2	AK020822|Ccdc58|381045|coiled-coil domain containing 58	AK135450|Ccdc58|381045|coiled-coil domain containing 58	BC024406|Ccdc58|381045|coiled-coil domain containing 58	BC053690|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr12_+_112916302_112916387	1.39366	HIF1A.p2	NM_001099792|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	NM_001099793|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	NM_177374|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	AK133579|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	AK049138|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	AK032824|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)	BC051186|Trmt61a|328162|tRNA methyltransferase 61 homolog A (S. cerevisiae)
mm9_v1_chr2_+_74536030_74536036	1.39347	HIF1A.p2	AK134427|Hoxd9|15438|homeobox D9
mm9_v1_chr18_-_34166572_34166697	1.39022	HIF1A.p2	BC007166|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	BC013557|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	AK161182|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr5_+_137791332_137791347	1.38431	HIF1A.p2	AK049340|Ephb4|13846|Eph receptor B4	AK132392|Ephb4|13846|Eph receptor B4	NM_001159571|Ephb4|13846|Eph receptor B4	NM_010144|Ephb4|13846|Eph receptor B4
mm9_v1_chr6_+_72548468_72548554	1.3826	HIF1A.p2	AK144115|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)
mm9_v1_chr2_-_52601140_52601264	1.37667	HIF1A.p2	AK214650|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK004604|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	NM_019667|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AB012611|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK044230|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK159699|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK017668|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK078244|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK168729|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	BC013818|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	DQ141211|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	AK035789|Stam2|56324|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
mm9_v1_chr11_-_70817905_70817971	1.37455	HIF1A.p2	BC027842|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	BC052172|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK035177|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_178367|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK087592|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm9_v1_chr11_+_101177524_101177765	1.37117	HIF1A.p2	AK140597|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK150939|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK171348|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	NM_011192|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	BC015255|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK156079|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	BC139818|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	D87911|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK178475|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK179381|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	AK180194|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	CT010198|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3	U60330|Psme3|19192|proteaseome (prosome, macropain) 28 subunit, 3
mm9_v1_chr13_+_38437584_38437664	1.36955	HIF1A.p2	NM_007556|Bmp6|12161|bone morphogenetic protein 6	X80992|Bmp6|12161|bone morphogenetic protein 6	BC138593|Bmp6|12161|bone morphogenetic protein 6	BC138595|Bmp6|12161|bone morphogenetic protein 6
mm9_v1_chr19_+_55328128_55328228	1.35576	HIF1A.p2	AK150542|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK150663|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK145894|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr19_+_7131270_7131299	1.35142	HIF1A.p2	AK052998|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr16_-_22265901_22266018	1.34888	HIF1A.p2	BC057996|Tra2b|20462|transformer 2 beta homolog (Drosophila)	X80232|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC086795|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK080378|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK169483|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152519|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167387|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK077418|Tra2b|20462|transformer 2 beta homolog (Drosophila)	BC061177|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK150007|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK049573|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK152761|Tra2b|20462|transformer 2 beta homolog (Drosophila)	AK167544|Tra2b|20462|transformer 2 beta homolog (Drosophila)	NM_009186|Tra2b|20462|transformer 2 beta homolog (Drosophila)
mm9_v1_chr3_+_88101037_88101138	1.34876	HIF1A.p2	AK031293|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158223|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK089548|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK146360|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK161630|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK171160|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	NM_009836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	Z31556|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC054776|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK168052|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139465|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	BC139467|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK154043|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158254|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK158272|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)	AK156836|Cct3|12462|chaperonin containing Tcp1, subunit 3 (gamma)
mm9_v1_chr9_+_39999900_39999944	1.34756	HIF1A.p2	AK172368|Zfp202|80902|zinc finger protein 202	NM_030713|Zfp202|80902|zinc finger protein 202	AF292648|Zfp202|80902|zinc finger protein 202	AF292649|Zfp202|80902|zinc finger protein 202	AK170181|Zfp202|80902|zinc finger protein 202
mm9_v1_chr2_+_71711274_71711402	1.34616	HIF1A.p2	AK046805|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK153649|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	NM_172665|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK163553|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC027196|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK028017|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	AK085215|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1	BC025480|Pdk1|228026|pyruvate dehydrogenase kinase, isoenzyme 1
mm9_v1_chr11_-_80593259_80593526	1.34131	HIF1A.p2	AK188302|Myo1d|338367|myosin ID	AK203977|Myo1d|338367|myosin ID	BC150765|Myo1d|338367|myosin ID	AK037051|Myo1d|338367|myosin ID	AK049374|Myo1d|338367|myosin ID	NM_177390|Myo1d|338367|myosin ID
mm9_v1_chr11_-_70513653_70513661	1.33747	HIF1A.p2	AK139002|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	AY601909|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	AY601910|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	AY601911|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	AY601912|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	NM_213729|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1
mm9_v1_chr19_-_45309725_45309963	1.33609	HIF1A.p2	AB108497|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)	NM_010691|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)	BC119177|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)	BC120586|Lbx1|16814|ladybird homeobox homolog 1 (Drosophila)
mm9_v1_chr4_-_114659706_114659870	1.33418	HIF1A.p2	AK004827|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK146436|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK002526|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	BC017684|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK162173|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK150162|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	NM_025647|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK077534|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1
mm9_v1_chr15_+_79177959_79178004	1.33247	HIF1A.p2	AK156896|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr6_+_64992584_64992660	1.33077	HIF1A.p2	NM_007958|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	X69942|Smarcad1|13990|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm9_v1_chr19_-_24248477_24248629	1.32957	HIF1A.p2	AF113005|Tjp2|21873|tight junction protein 2	BC042695|Tjp2|21873|tight junction protein 2	BC034677|Tjp2|21873|tight junction protein 2	BC039924|Tjp2|21873|tight junction protein 2	NM_001198985|Tjp2|21873|tight junction protein 2
mm9_v1_chr4_-_14753526_14753603	1.32842	HIF1A.p2	BC087552|Otud6b|72201|OTU domain containing 6B	AK172229|Otud6b|72201|OTU domain containing 6B	AK172338|Otud6b|72201|OTU domain containing 6B	BC031474|Otud6b|72201|OTU domain containing 6B	AK011203|Otud6b|72201|OTU domain containing 6B	AK169134|Otud6b|72201|OTU domain containing 6B	AK166546|Otud6b|72201|OTU domain containing 6B	AK144761|Otud6b|72201|OTU domain containing 6B	AK166445|Otud6b|72201|OTU domain containing 6B	AK155761|Otud6b|72201|OTU domain containing 6B
mm9_v1_chr1_+_57463391_57463391	1.32631	HIF1A.p2	AK079116|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	NM_001081181|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr14_+_70167278_70167338	1.32523	HIF1A.p2	AK050753|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	NM_020275|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK080069|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK145730|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK154993|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	BC065141|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AB031081|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr15_-_77137425_77137482	1.32375	HIF1A.p2	AK139555|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110827|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_053104|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_175387|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr18_+_57514370_57514505	1.32271	HIF1A.p2	NM_028447|Prrc1|73137|proline-rich coiled-coil 1	AK004443|Prrc1|73137|proline-rich coiled-coil 1	AK143537|Prrc1|73137|proline-rich coiled-coil 1	AK014139|Prrc1|73137|proline-rich coiled-coil 1	BC014817|Prrc1|73137|proline-rich coiled-coil 1
mm9_v1_chr4_+_40917975_40918059	1.32025	HIF1A.p2	NM_023739|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK144647|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK005038|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK050749|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK160013|Nfx1|74164|nuclear transcription factor, X-box binding 1	AF223576|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK146108|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK155387|Nfx1|74164|nuclear transcription factor, X-box binding 1	AK033850|Nfx1|74164|nuclear transcription factor, X-box binding 1	X80436|Nfx1|74164|nuclear transcription factor, X-box binding 1	BC053709|Nfx1|74164|nuclear transcription factor, X-box binding 1
mm9_v1_chr19_+_7131234_7131258	1.31895	HIF1A.p2	NM_134147|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr1_-_172104899_172104931	1.3173	HIF1A.p2	BC017547|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK171925|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1	AK163314|Uap1|107652|UDP-N-acetylglucosamine pyrophosphorylase 1
mm9_v1_chr13_+_73468441_73468488	1.3145	HIF1A.p2	AK160778|Mrpl36|94066|mitochondrial ribosomal protein L36	BC009166|Mrpl36|94066|mitochondrial ribosomal protein L36	NM_053163|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131597|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131601|Mrpl36|94066|mitochondrial ribosomal protein L36	AK131604|Mrpl36|94066|mitochondrial ribosomal protein L36	AK075780|Mrpl36|94066|mitochondrial ribosomal protein L36	AB049655|Mrpl36|94066|mitochondrial ribosomal protein L36
mm9_v1_chr4_-_106925932_106925954	1.31408	HIF1A.p2	AK020847|Lrrc42|77809|leucine rich repeat containing 42
mm9_v1_chr19_-_7062118_7062180	1.31298	HIF1A.p2	BC046303|Vegfb|22340|vascular endothelial growth factor B	AK148188|Vegfb|22340|vascular endothelial growth factor B	NM_001185164|Vegfb|22340|vascular endothelial growth factor B	NM_011697|Vegfb|22340|vascular endothelial growth factor B
mm9_v1_chr10_-_75905451_75905555	1.31084	HIF1A.p2	BC100380|Pcnt|18541|pericentrin (kendrin)	BC034865|Pcnt|18541|pericentrin (kendrin)	BC085244|Pcnt|18541|pericentrin (kendrin)	AK145315|Pcnt|18541|pericentrin (kendrin)	AB207233|Pcnt|18541|pericentrin (kendrin)
mm9_v1_chr10_-_33926990_33927064	1.31059	HIF1A.p2	AK153326|Dse|212898|dermatan sulfate epimerase	AK031737|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr5_+_91320265_91320335	1.3091	HIF1A.p2	AK140312|Cxcl1|14825|chemokine (C-X-C motif) ligand 1	NM_008176|Cxcl1|14825|chemokine (C-X-C motif) ligand 1	BC132502|Cxcl1|14825|chemokine (C-X-C motif) ligand 1	BC132504|Cxcl1|14825|chemokine (C-X-C motif) ligand 1	BC037997|Cxcl1|14825|chemokine (C-X-C motif) ligand 1	J04596|Cxcl1|14825|chemokine (C-X-C motif) ligand 1
mm9_v1_chr19_+_5088593_5088613	1.30877	HIF1A.p2	BC011117|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)
mm9_v1_chr6_+_72548583_72548626	1.30722	HIF1A.p2	EF620363|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	EF620364|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	EF620365|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	AY704159|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	BC117751|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	NM_026159|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)	BC117750|Retsat|67442|retinol saturase (all trans retinol 13,14 reductase)
mm9_v1_chrX_-_98417753_98417901	1.30494	HIF1A.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr13_+_34254827_34254896	1.30489	HIF1A.p2	NM_001101430|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4	NM_001110515|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4	BC070417|Psmg4|69666|proteasome (prosome, macropain) assembly chaperone 4
mm9_v1_chr5_+_145016734_145016797	1.30189	HIF1A.p2	X61454|Bri3|55950|brain protein I3
mm9_v1_chr4_+_153544821_153544830	1.29926	HIF1A.p2	NM_001162977|Megf6|230971|multiple EGF-like-domains 6
mm9_v1_chr6_+_49023793_49023864	1.29891	HIF1A.p2	NM_029353|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK031878|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK153503|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene	AK010366|2410003K15Rik|75593|RIKEN cDNA 2410003K15 gene
mm9_v1_chr11_-_115397455_115397592	1.29794	HIF1A.p2	BC083326|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK085238|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	BC017522|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	BC095930|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	L79948|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK132213|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK012619|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	NM_133354|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK167308|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK160404|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)	AK160418|Sumo2|170930|SMT3 suppressor of mif two 3 homolog 2 (yeast)
mm9_v1_chr15_+_103103335_103103351	1.29605	HIF1A.p2	BC085314|Copz1|56447|coatomer protein complex, subunit zeta 1	AK003302|Copz1|56447|coatomer protein complex, subunit zeta 1	AK167636|Copz1|56447|coatomer protein complex, subunit zeta 1	BC002246|Copz1|56447|coatomer protein complex, subunit zeta 1	BC025041|Copz1|56447|coatomer protein complex, subunit zeta 1	BC039920|Copz1|56447|coatomer protein complex, subunit zeta 1	BC062203|Copz1|56447|coatomer protein complex, subunit zeta 1	AB037370|Copz1|56447|coatomer protein complex, subunit zeta 1	NM_019817|Copz1|56447|coatomer protein complex, subunit zeta 1	BC052891|Copz1|56447|coatomer protein complex, subunit zeta 1	BC058524|Copz1|56447|coatomer protein complex, subunit zeta 1
mm9_v1_chr7_+_51565563_51565633	1.2918	HIF1A.p2	NM_001034115|Shank1|243961|SH3/ankyrin domain gene 1
mm9_v1_chr7_-_142129892_142130112	1.29151	HIF1A.p2	BC158077|Fam196a|627214|family with sequence similarity 196, member A	BC158080|Fam196a|627214|family with sequence similarity 196, member A	AK046823|Fam196a|627214|family with sequence similarity 196, member A	AK046846|Fam196a|627214|family with sequence similarity 196, member A	AK140373|Fam196a|627214|family with sequence similarity 196, member A	NM_001143802|Fam196a|627214|family with sequence similarity 196, member A
mm9_v1_chr4_-_34830178_34830200	1.28765	HIF1A.p2	AK017652|Zfp292|30046|zinc finger protein 292	AK018067|Zfp292|30046|zinc finger protein 292	NM_013889|Zfp292|30046|zinc finger protein 292	BC036997|Zfp292|30046|zinc finger protein 292
mm9_v1_chr8_-_126545208_126545336	1.2859	HIF1A.p2	BC013550|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_133966|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK089463|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK154832|Taf5l|102162|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm9_v1_chr1_-_36996371_36996496	1.2848	HIF1A.p2	AK139317|Tmem131|56030|transmembrane protein 131	NM_018872|Tmem131|56030|transmembrane protein 131
mm9_v1_chr19_-_45080871_45080957	1.28344	HIF1A.p2	BC027676|Mrpl43|94067|mitochondrial ribosomal protein L43	BC065812|Mrpl43|94067|mitochondrial ribosomal protein L43	AK076204|Mrpl43|94067|mitochondrial ribosomal protein L43	AB049657|Mrpl43|94067|mitochondrial ribosomal protein L43	AK015357|Mrpl43|94067|mitochondrial ribosomal protein L43	BC048733|Mrpl43|94067|mitochondrial ribosomal protein L43	NM_053164|Mrpl43|94067|mitochondrial ribosomal protein L43
mm9_v1_chr17_+_35390491_35390518	1.28274	HIF1A.p2	AK196028|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr5_-_115608153_115608220	1.27822	HIF1A.p2	AK031525|Mlec|109154|malectin	AK075940|Mlec|109154|malectin	NM_175403|Mlec|109154|malectin
mm9_v1_chr5_-_135726771_135726916	1.27597	HIF1A.p2	AF033585|Fzd9|14371|frizzled homolog 9 (Drosophila)	NM_010246|Fzd9|14371|frizzled homolog 9 (Drosophila)
mm9_v1_chr5_+_109123455_109123520	1.27526	HIF1A.p2	AF321300|Fgfrl1|116701|fibroblast growth factor receptor-like 1
mm9_v1_chr10_-_119638448_119638648	1.27134	HIF1A.p2	AJ440757|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120829|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC120831|Irak3|73914|interleukin-1 receptor-associated kinase 3	BC144835|Irak3|73914|interleukin-1 receptor-associated kinase 3	AF461763|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK029057|Irak3|73914|interleukin-1 receptor-associated kinase 3	NM_028679|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK049210|Irak3|73914|interleukin-1 receptor-associated kinase 3	AK014783|Irak3|73914|interleukin-1 receptor-associated kinase 3
mm9_v1_chr8_+_127246038_127246102	1.27119	HIF1A.p2	AK004398|Arv1|68865|ARV1 homolog (yeast)	NM_026855|Arv1|68865|ARV1 homolog (yeast)	BC119376|Arv1|68865|ARV1 homolog (yeast)	BC120631|Arv1|68865|ARV1 homolog (yeast)	BC144875|Arv1|68865|ARV1 homolog (yeast)	BC144876|Arv1|68865|ARV1 homolog (yeast)
mm9_v1_chr3_-_51144470_51144612	1.26977	HIF1A.p2	AK160118|Elf2|69257|E74-like factor 2	AK139199|Elf2|69257|E74-like factor 2	BC069901|Elf2|69257|E74-like factor 2	AK146819|Elf2|69257|E74-like factor 2
mm9_v1_chr13_-_14705281_14705338	1.26872	HIF1A.p2	AF279255|Mrpl32|75398|mitochondrial ribosomal protein L32	AK078324|Mrpl32|75398|mitochondrial ribosomal protein L32	AK031791|Mrpl32|75398|mitochondrial ribosomal protein L32	AK002753|Mrpl32|75398|mitochondrial ribosomal protein L32	NM_029271|Mrpl32|75398|mitochondrial ribosomal protein L32	AB049650|Mrpl32|75398|mitochondrial ribosomal protein L32	BC052214|Mrpl32|75398|mitochondrial ribosomal protein L32
mm9_v1_chr15_-_99602827_99602945	1.26839	HIF1A.p2	AK146417|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK145589|Lass5|71949|LAG1 homolog, ceramide synthase 5	AY029533|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK075694|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK146220|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK145762|Lass5|71949|LAG1 homolog, ceramide synthase 5	AK010241|Lass5|71949|LAG1 homolog, ceramide synthase 5	BC043059|Lass5|71949|LAG1 homolog, ceramide synthase 5	BC046797|Lass5|71949|LAG1 homolog, ceramide synthase 5	NM_028015|Lass5|71949|LAG1 homolog, ceramide synthase 5
mm9_v1_chr5_-_144493077_144493148	1.26793	HIF1A.p2	NM_029749|Usp42|76800|ubiquitin specific peptidase 42
mm9_v1_chr15_-_89185996_89186115	1.2627	HIF1A.p2	AK085435|Lmf2|105847|lipase maturation factor 2	AK149916|Lmf2|105847|lipase maturation factor 2	BC038039|Lmf2|105847|lipase maturation factor 2	AK042427|Lmf2|105847|lipase maturation factor 2	AK158371|Lmf2|105847|lipase maturation factor 2	AK171488|Lmf2|105847|lipase maturation factor 2	AK149934|Lmf2|105847|lipase maturation factor 2	NM_178919|Lmf2|105847|lipase maturation factor 2
mm9_v1_chr7_+_3655919_3655955	1.26144	HIF1A.p2	BC012491|Rps9|76846|ribosomal protein S9
mm9_v1_chr9_+_57556346_57556409	1.25898	HIF1A.p2	AK146804|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK140127|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK168118|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK090005|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	AK166286|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	NM_153799|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	BC031725|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)	BC033484|Edc3|353190|enhancer of mRNA decapping 3 homolog (S. cerevisiae)
mm9_v1_chr2_+_158620555_158620616	1.25667	HIF1A.p2	BC029709|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	NM_145742|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK156955|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK155482|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK170952|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35	AK004665|Dhx35|71715|DEAH (Asp-Glu-Ala-His) box polypeptide 35
mm9_v1_chr1_-_164478628_164478690	1.25598	HIF1A.p2	AK173044|Mettl13|71449|methyltransferase like 13	AK084750|Mettl13|71449|methyltransferase like 13	AK048636|Mettl13|71449|methyltransferase like 13	AK017470|Mettl13|71449|methyltransferase like 13	AK162843|Mettl13|71449|methyltransferase like 13	AK050492|Mettl13|71449|methyltransferase like 13	AK146751|Mettl13|71449|methyltransferase like 13	AK169319|Mettl13|71449|methyltransferase like 13	AK168959|Mettl13|71449|methyltransferase like 13
mm9_v1_chr14_+_32454236_32454303	1.25379	HIF1A.p2	NM_025295|Btd|26363|biotinidase	AK005506|Btd|26363|biotinidase	AK135375|Btd|26363|biotinidase	BC024051|Btd|26363|biotinidase
mm9_v1_chr5_-_65726802_65726885	1.25247	HIF1A.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr13_+_37919261_37919261	1.25202	HIF1A.p2	AK170652|Rreb1|68750|ras responsive element binding protein 1	NM_001039188|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr12_+_8778152_8778192	1.25	HIF1A.p2	AK132236|Sdc1|20969|syndecan 1	AK143529|Sdc1|20969|syndecan 1
mm9_v1_chr17_+_14416508_14416565	1.24686	HIF1A.p2	NM_022315|Smoc2|64074|SPARC related modular calcium binding 2	AJ249901|Smoc2|64074|SPARC related modular calcium binding 2	AK030958|Smoc2|64074|SPARC related modular calcium binding 2	AK159749|Smoc2|64074|SPARC related modular calcium binding 2	AK160002|Smoc2|64074|SPARC related modular calcium binding 2	AK172312|Smoc2|64074|SPARC related modular calcium binding 2	AK040109|Smoc2|64074|SPARC related modular calcium binding 2	BC019527|Smoc2|64074|SPARC related modular calcium binding 2
mm9_v1_chr2_+_163484132_163484240	1.24178	HIF1A.p2	AK164716|Pkig|18769|protein kinase inhibitor, gamma	AK168614|Pkig|18769|protein kinase inhibitor, gamma	NM_001164053|Pkig|18769|protein kinase inhibitor, gamma	AK184424|Pkig|18769|protein kinase inhibitor, gamma	AK186035|Pkig|18769|protein kinase inhibitor, gamma	AK186927|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr2_-_13192850_13192974	1.23808	HIF1A.p2	X63039|Rsu1|20163|Ras suppressor protein 1	BC003827|Rsu1|20163|Ras suppressor protein 1	NM_009105|Rsu1|20163|Ras suppressor protein 1	AK150011|Rsu1|20163|Ras suppressor protein 1	AK149835|Rsu1|20163|Ras suppressor protein 1	AK152655|Rsu1|20163|Ras suppressor protein 1	AK009288|Rsu1|20163|Ras suppressor protein 1	AK011857|Rsu1|20163|Ras suppressor protein 1	AK135491|Rsu1|20163|Ras suppressor protein 1	AK169076|Rsu1|20163|Ras suppressor protein 1
mm9_v1_chr2_+_163484110_163484121	1.23686	HIF1A.p2	AK135505|Pkig|18769|protein kinase inhibitor, gamma	NM_001039390|Pkig|18769|protein kinase inhibitor, gamma	NM_001039391|Pkig|18769|protein kinase inhibitor, gamma	NM_001164055|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr6_-_30459703_30459756	1.23396	HIF1A.p2	AK089486|Tmem209|72649|transmembrane protein 209	AK170465|Tmem209|72649|transmembrane protein 209	BC057109|Tmem209|72649|transmembrane protein 209	NM_178625|Tmem209|72649|transmembrane protein 209	BC052187|Tmem209|72649|transmembrane protein 209	AK029366|Tmem209|72649|transmembrane protein 209	AK089962|Tmem209|72649|transmembrane protein 209	AK078544|Tmem209|72649|transmembrane protein 209	AK044877|Tmem209|72649|transmembrane protein 209	AK084222|Tmem209|72649|transmembrane protein 209
mm9_v1_chr5_+_124990703_124991022	1.23297	HIF1A.p2	BC131977|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC138294|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	BC083140|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	NM_019770|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK089965|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AB025218|Tmed2|56334|transmembrane emp24 domain trafficking protein 2	AK179651|Tmed2|56334|transmembrane emp24 domain trafficking protein 2
mm9_v1_chr10_+_82323085_82323203	1.22602	HIF1A.p2	NM_001042514|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr2_+_74663857_74664073	1.21966	HIF1A.p2	NM_016804|Mtx2|53375|metaxin 2	AK169048|Mtx2|53375|metaxin 2	AB041562|Mtx2|53375|metaxin 2	AK168000|Mtx2|53375|metaxin 2	AK168045|Mtx2|53375|metaxin 2	AK087933|Mtx2|53375|metaxin 2	AF053550|Mtx2|53375|metaxin 2	AK168021|Mtx2|53375|metaxin 2	AK083055|Mtx2|53375|metaxin 2	BC006641|Mtx2|53375|metaxin 2	AK005233|Mtx2|53375|metaxin 2	AK179720|Mtx2|53375|metaxin 2	AK179764|Mtx2|53375|metaxin 2	AK219408|Mtx2|53375|metaxin 2
mm9_v1_chr7_+_52661329_52661329	1.21702	HIF1A.p2	NM_010596|Kcna7|16495|potassium voltage-gated channel, shaker-related subfamily, member 7
mm9_v1_chr15_-_93167308_93167408	1.2168	HIF1A.p2	AK148634|Yaf2|67057|YY1 associated factor 2	AB100452|Yaf2|67057|YY1 associated factor 2	AB100453|Yaf2|67057|YY1 associated factor 2	AK005008|Yaf2|67057|YY1 associated factor 2	AK011702|Yaf2|67057|YY1 associated factor 2	NM_024189|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr12_+_77634546_77634606	1.21367	HIF1A.p2	AK080928|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	NM_153804|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	BC096443|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	AK162025|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm9_v1_chr14_-_34260308_34260313	1.21345	HIF1A.p2	BC053027|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr8_-_55615268_55615375	1.21253	HIF1A.p2	BC019390|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	AK028314|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	BC054817|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	AK007432|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	AK048051|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)	NM_029701|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm9_v1_chr7_-_134852110_134852201	1.20527	HIF1A.p2	Y11905|Bcl7c|12055|B-cell CLL/lymphoma 7C	BC058530|Bcl7c|12055|B-cell CLL/lymphoma 7C	AK131935|Bcl7c|12055|B-cell CLL/lymphoma 7C
mm9_v1_chr11_+_60351469_60351612	1.20501	HIF1A.p2	AK053695|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK049130|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK169700|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	BC052076|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK053700|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK162072|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)	AK163294|Alkbh5|268420|alkB, alkylation repair homolog 5 (E. coli)
mm9_v1_chr15_+_73578771_73578842	1.20254	HIF1A.p2	AK143702|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK172192|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK014601|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr4_+_128670474_128670574	1.20144	HIF1A.p2	AK050133|Ak2|11637|adenylate kinase 2	AK167797|Ak2|11637|adenylate kinase 2	NM_001033966|Ak2|11637|adenylate kinase 2	AK168148|Ak2|11637|adenylate kinase 2	AB020202|Ak2|11637|adenylate kinase 2	AK168056|Ak2|11637|adenylate kinase 2	AK010936|Ak2|11637|adenylate kinase 2	AK010951|Ak2|11637|adenylate kinase 2	AK077519|Ak2|11637|adenylate kinase 2	BC008610|Ak2|11637|adenylate kinase 2	NM_016895|Ak2|11637|adenylate kinase 2	AK166976|Ak2|11637|adenylate kinase 2
mm9_v1_chr9_+_70390703_70390723	1.19876	HIF1A.p2	AK162780|Sltm|66660|SAFB-like, transcription modulator	AK017839|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr2_+_162757228_162757280	1.19764	HIF1A.p2	NM_026499|Srsf6|67996|serine/arginine-rich splicing factor 6	AK004831|Srsf6|67996|serine/arginine-rich splicing factor 6	AK133872|Srsf6|67996|serine/arginine-rich splicing factor 6	AK171709|Srsf6|67996|serine/arginine-rich splicing factor 6	AK146293|Srsf6|67996|serine/arginine-rich splicing factor 6	AK159519|Srsf6|67996|serine/arginine-rich splicing factor 6	BC012039|Srsf6|67996|serine/arginine-rich splicing factor 6
mm9_v1_chr16_-_36071600_36071716	1.19626	HIF1A.p2	AK009946|Fam162a|70186|family with sequence similarity 162, member A	NM_027342|Fam162a|70186|family with sequence similarity 162, member A	BC010826|Fam162a|70186|family with sequence similarity 162, member A	AK033568|Fam162a|70186|family with sequence similarity 162, member A
mm9_v1_chr15_+_97794629_97794751	1.19251	HIF1A.p2	AK134684|Tmem106c|380967|transmembrane protein 106C	BC046621|Tmem106c|380967|transmembrane protein 106C	NM_201359|Tmem106c|380967|transmembrane protein 106C
mm9_v1_chr19_-_12870612_12870615	1.19152	HIF1A.p2	NM_053009|Zfp91|109910|zinc finger protein 91	AK147560|Zfp91|109910|zinc finger protein 91
mm9_v1_chr8_-_64238879_64238894	1.19002	HIF1A.p2	AK031696|Palld|72333|palladin, cytoskeletal associated protein	AK162050|Palld|72333|palladin, cytoskeletal associated protein	AK087270|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr17_+_69732689_69732721	1.18666	HIF1A.p2	AK146201|Zfp161|22666|zinc finger protein 161	AK145517|Zfp161|22666|zinc finger protein 161
mm9_v1_chr7_-_126937466_126937571	1.18554	HIF1A.p2	AK160698|Eri2|71151|exoribonuclease 2	AK129376|Eri2|71151|exoribonuclease 2	BC090961|Eri2|71151|exoribonuclease 2	AK015831|Eri2|71151|exoribonuclease 2	AK016902|Eri2|71151|exoribonuclease 2	AK165163|Eri2|71151|exoribonuclease 2	AK135821|Eri2|71151|exoribonuclease 2	BC052150|Eri2|71151|exoribonuclease 2	AK029056|Eri2|71151|exoribonuclease 2	AK141507|Eri2|71151|exoribonuclease 2	AK137621|Eri2|71151|exoribonuclease 2	NM_027698|Eri2|71151|exoribonuclease 2
mm9_v1_chr16_+_20672890_20672931	1.18406	HIF1A.p2	AK150050|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066103|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC079675|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr8_+_75247189_75247206	1.18386	HIF1A.p2	AK165592|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC021160|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC129859|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	L38622|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC096367|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	AF038848|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC020049|Sin3b|20467|transcriptional regulator, SIN3B (yeast)
mm9_v1_chr10_+_80532812_80532901	1.18183	HIF1A.p2	NM_022653|Thop1|50492|thimet oligopeptidase 1	BC031722|Thop1|50492|thimet oligopeptidase 1	BC003211|Thop1|50492|thimet oligopeptidase 1	AF314187|Thop1|50492|thimet oligopeptidase 1	AK028609|Thop1|50492|thimet oligopeptidase 1
mm9_v1_chr4_+_140703825_140703842	1.18154	HIF1A.p2	NM_172518|Fbxo42|213499|F-box protein 42
mm9_v1_chr8_+_73063553_73063604	1.17934	HIF1A.p2	NM_007924|Ell|13716|elongation factor RNA polymerase II	AK159027|Ell|13716|elongation factor RNA polymerase II	U80227|Ell|13716|elongation factor RNA polymerase II	BC014816|Ell|13716|elongation factor RNA polymerase II	BC024894|Ell|13716|elongation factor RNA polymerase II
mm9_v1_chr11_-_106349097_106349184	1.17852	HIF1A.p2	AB031332|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	NM_023913|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK077041|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK170988|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK018505|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK083891|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1	AK080709|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1
mm9_v1_chr11_-_68787314_68787359	1.17679	HIF1A.p2	BC087921|Rangrf|57785|RAN guanine nucleotide release factor	NM_001101644|Gm4535|100043585|predicted gene 4535	NM_021329|Rangrf|57785|RAN guanine nucleotide release factor	AF243512|Rangrf|57785|RAN guanine nucleotide release factor	BC038470|Rangrf|57785|RAN guanine nucleotide release factor	AK010288|Rangrf|57785|RAN guanine nucleotide release factor
mm9_v1_chr11_-_98010872_98010958	1.17383	HIF1A.p2	AK220232|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK161566|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK144786|Fbxl20|72194|F-box and leucine-rich repeat protein 20	NM_028149|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK012109|Fbxl20|72194|F-box and leucine-rich repeat protein 20
mm9_v1_chr3_+_69525922_69526018	1.17153	HIF1A.p2	AK145248|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK088667|Nmd3|97112|NMD3 homolog (S. cerevisiae)	BC003842|Nmd3|97112|NMD3 homolog (S. cerevisiae)	NM_133787|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK198106|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK166283|Nmd3|97112|NMD3 homolog (S. cerevisiae)	AK143289|Nmd3|97112|NMD3 homolog (S. cerevisiae)
mm9_v1_chr10_-_80729645_80729680	1.16931	HIF1A.p2	AK009657|Mrpl54|66047|mitochondrial ribosomal protein L54	BC056985|Mrpl54|66047|mitochondrial ribosomal protein L54	AK002348|Mrpl54|66047|mitochondrial ribosomal protein L54	AK003225|Mrpl54|66047|mitochondrial ribosomal protein L54	NM_025317|Mrpl54|66047|mitochondrial ribosomal protein L54
mm9_v1_chr5_+_76612903_76613006	1.1675	HIF1A.p2	NM_011626|Tmem165|21982|transmembrane protein 165	BC037638|Tmem165|21982|transmembrane protein 165	AK004829|Tmem165|21982|transmembrane protein 165	M23568|Tmem165|21982|transmembrane protein 165
mm9_v1_chr4_-_147462051_147462172	1.16417	HIF1A.p2	AF102548|Agtrap|11610|angiotensin II, type I receptor-associated protein	BC057196|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK007502|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK036598|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK007383|Agtrap|11610|angiotensin II, type I receptor-associated protein	AK152467|Agtrap|11610|angiotensin II, type I receptor-associated protein	NM_009642|Agtrap|11610|angiotensin II, type I receptor-associated protein
mm9_v1_chr17_-_24346171_24346241	1.16205	HIF1A.p2	AF128866|Ntn3|18209|netrin 3	AK141856|Ntn3|18209|netrin 3
mm9_v1_chr9_+_70390523_70390626	1.15997	HIF1A.p2	AK077578|Sltm|66660|SAFB-like, transcription modulator	NM_026337|Sltm|66660|SAFB-like, transcription modulator	AK078251|Sltm|66660|SAFB-like, transcription modulator	AK011815|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr12_-_21379292_21379460	1.15989	HIF1A.p2	AJ007365|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC114999|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69613|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138416|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC138420|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC145270|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC026052|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149288|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK139471|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC048792|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK137693|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK149614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK165739|Adam17|11491|a disintegrin and metallopeptidase domain 17	BC094655|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK144161|Adam17|11491|a disintegrin and metallopeptidase domain 17	U69614|Adam17|11491|a disintegrin and metallopeptidase domain 17	AK142441|Adam17|11491|a disintegrin and metallopeptidase domain 17	NM_009615|Adam17|11491|a disintegrin and metallopeptidase domain 17	AB021709|Adam17|11491|a disintegrin and metallopeptidase domain 17
mm9_v1_chr10_+_79578529_79578555	1.15955	HIF1A.p2	AK171909|Stk11|20869|serine/threonine kinase 11	AK172385|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr2_+_127953310_127953338	1.15108	HIF1A.p2	BC058175|Bcl2l11|12125|BCL2-like 11 (apoptosis facilitator)
mm9_v1_chr7_-_105457979_105458055	1.15017	HIF1A.p2	AK150629|Acer3|66190|alkaline ceramidase 3	AK080977|Acer3|66190|alkaline ceramidase 3	AK011668|Acer3|66190|alkaline ceramidase 3	NM_025408|Acer3|66190|alkaline ceramidase 3	AK004287|Acer3|66190|alkaline ceramidase 3	AK162403|Acer3|66190|alkaline ceramidase 3
mm9_v1_chr7_+_133792793_133792915	1.14914	HIF1A.p2	AK139102|Ccdc101|75565|coiled-coil domain containing 101	NM_029339|Ccdc101|75565|coiled-coil domain containing 101	AK169898|Ccdc101|75565|coiled-coil domain containing 101	BC026784|Ccdc101|75565|coiled-coil domain containing 101	AK006287|Ccdc101|75565|coiled-coil domain containing 101
mm9_v1_chr11_-_101645629_101645660	1.14738	HIF1A.p2	AK144683|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr13_-_117814322_117814345	1.1447	HIF1A.p2	NM_001081009|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK155693|Parp8|52552|poly (ADP-ribose) polymerase family, member 8
mm9_v1_chr11_-_79068138_79068204	1.14449	HIF1A.p2	AK150600|Wsb1|78889|WD repeat and SOCS box-containing 1	AK159905|Wsb1|78889|WD repeat and SOCS box-containing 1	AK146752|Wsb1|78889|WD repeat and SOCS box-containing 1	AK150394|Wsb1|78889|WD repeat and SOCS box-containing 1	AK167942|Wsb1|78889|WD repeat and SOCS box-containing 1	AK169058|Wsb1|78889|WD repeat and SOCS box-containing 1	AK019206|Wsb1|78889|WD repeat and SOCS box-containing 1	AK152545|Wsb1|78889|WD repeat and SOCS box-containing 1	AK167174|Wsb1|78889|WD repeat and SOCS box-containing 1	AK145974|Wsb1|78889|WD repeat and SOCS box-containing 1	AK167394|Wsb1|78889|WD repeat and SOCS box-containing 1	AK168468|Wsb1|78889|WD repeat and SOCS box-containing 1	AK168565|Wsb1|78889|WD repeat and SOCS box-containing 1	NM_019653|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr12_-_114180283_114180368	1.14395	HIF1A.p2	AK013174|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14	BC025444|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14	NM_025399|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14	AK003991|Nudt14|66174|nudix (nucleoside diphosphate linked moiety X)-type motif 14
mm9_v1_chr3_+_106350707_106350756	1.13637	HIF1A.p2	NM_001025582|Dram2|67171|VDNA-damage regulated autophagy modulator 2	NM_026013|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK015888|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK172455|Dram2|67171|VDNA-damage regulated autophagy modulator 2
mm9_v1_chr5_-_77738960_77739110	1.13516	HIF1A.p2	AK139955|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK172681|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AB041537|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK017793|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK128920|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	BC017154|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK163935|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK019975|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK011533|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK157246|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	NM_019836|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene
mm9_v1_chr15_-_81702298_81702350	1.13447	HIF1A.p2	AK163247|Phf5a|68479|PHD finger protein 5A	AK143590|Phf5a|68479|PHD finger protein 5A	NM_026737|Phf5a|68479|PHD finger protein 5A	AK167955|Phf5a|68479|PHD finger protein 5A	BC025161|Phf5a|68479|PHD finger protein 5A	AK003520|Phf5a|68479|PHD finger protein 5A	AF479288|Phf5a|68479|PHD finger protein 5A	AK167932|Phf5a|68479|PHD finger protein 5A
mm9_v1_chr7_-_30033397_30033450	1.13042	HIF1A.p2	AK033738|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	BC086934|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	AK008617|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene
mm9_v1_chr18_-_70632130_70632138	1.1252	HIF1A.p2	AK037066|4930503L19Rik|269033|RIKEN cDNA 4930503L19 gene	NM_172967|4930503L19Rik|269033|RIKEN cDNA 4930503L19 gene
mm9_v1_chr1_-_169215189_169215201	1.12459	HIF1A.p2	AK077517|Uck2|80914|uridine-cytidine kinase 2	BC023789|Uck2|80914|uridine-cytidine kinase 2
mm9_v1_chr17_-_56175896_56176097	1.12103	HIF1A.p2	AK162715|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138602|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138603|Sh3gl1|20405|SH3-domain GRB2-like 1	BC145345|Sh3gl1|20405|SH3-domain GRB2-like 1	NM_013664|Sh3gl1|20405|SH3-domain GRB2-like 1	U58885|Sh3gl1|20405|SH3-domain GRB2-like 1	AK167505|Sh3gl1|20405|SH3-domain GRB2-like 1	AK154836|Sh3gl1|20405|SH3-domain GRB2-like 1
mm9_v1_chr4_-_116480136_116480166	1.12098	HIF1A.p2	BC023109|Toe1|68276|target of EGR1, member 1 (nuclear)	AK082975|Toe1|68276|target of EGR1, member 1 (nuclear)	AK016889|Toe1|68276|target of EGR1, member 1 (nuclear)	AK019829|Toe1|68276|target of EGR1, member 1 (nuclear)	NM_026654|Toe1|68276|target of EGR1, member 1 (nuclear)
mm9_v1_chr4_+_116692006_116692070	1.11929	HIF1A.p2	NM_001111277|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	NM_175135|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172173|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK145856|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3	AK172302|Eif2b3|108067|eukaryotic translation initiation factor 2B, subunit 3
mm9_v1_chr7_-_30875415_30875528	1.11732	HIF1A.p2	BC019790|Zfp566|72556|zinc finger protein 566	AK012367|Zfp566|72556|zinc finger protein 566	NM_152814|Zfp566|72556|zinc finger protein 566
mm9_v1_chr12_-_17006800_17006879	1.1115	HIF1A.p2	AK089230|Pqlc3|217430|PQ loop repeat containing	AK150094|Pqlc3|217430|PQ loop repeat containing	BC025220|Pqlc3|217430|PQ loop repeat containing	AK053171|Pqlc3|217430|PQ loop repeat containing
mm9_v1_chr10_+_85484933_85484965	1.1111	HIF1A.p2	AK150190|Fbxo7|69754|F-box protein 7	AK147907|Fbxo7|69754|F-box protein 7
mm9_v1_chr12_+_33638809_33638809	1.11066	HIF1A.p2	BC060971|Sypl|19027|synaptophysin-like protein	NM_013635|Sypl|19027|synaptophysin-like protein
mm9_v1_chr3_-_107889507_107889627	1.10932	HIF1A.p2	BC049119|Ampd2|109674|adenosine monophosphate deaminase 2	NM_028779|Ampd2|109674|adenosine monophosphate deaminase 2	AK169980|Ampd2|109674|adenosine monophosphate deaminase 2	AK004759|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr18_+_64500017_64500040	1.10827	HIF1A.p2	AY242995|Onecut2|225631|one cut domain, family member 2	NM_194268|Onecut2|225631|one cut domain, family member 2	BC100750|Onecut2|225631|one cut domain, family member 2	BC100755|Onecut2|225631|one cut domain, family member 2	BC103668|Onecut2|225631|one cut domain, family member 2
mm9_v1_chr4_-_116855158_116855228	1.10572	HIF1A.p2	AK150222|Kif2c|73804|kinesin family member 2C	AK088047|Kif2c|73804|kinesin family member 2C	BC006841|Kif2c|73804|kinesin family member 2C	AK015046|Kif2c|73804|kinesin family member 2C	NM_134471|Kif2c|73804|kinesin family member 2C
mm9_v1_chr11_-_22759512_22759752	1.10419	HIF1A.p2	AF092050|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	AY043479|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	AK160088|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	NM_016888|B3gnt2|53625|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
mm9_v1_chr8_+_128258102_128258213	1.10255	HIF1A.p2	AK010823|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	NM_025636|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK019321|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK010229|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK019421|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK086714|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	AK006433|Ntpcr|66566|nucleoside-triphosphatase, cancer-related	BC025168|Ntpcr|66566|nucleoside-triphosphatase, cancer-related
mm9_v1_chr17_-_27270820_27270865	1.09997	HIF1A.p2	AK013521|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	AK019014|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	NM_026063|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	BC030629|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene
mm9_v1_chr6_-_91066773_91066797	1.09755	HIF1A.p2	AK173056|Nup210|54563|nucleoporin 210	AF113751|Nup210|54563|nucleoporin 210	AK077812|Nup210|54563|nucleoporin 210
mm9_v1_chr4_+_129497408_129497532	1.09668	HIF1A.p2	AK155895|Ptp4a2|19244|protein tyrosine phosphatase 4a2	BC087551|Ptp4a2|19244|protein tyrosine phosphatase 4a2
mm9_v1_chr17_-_41071432_41071526	1.09589	HIF1A.p2	BC018524|Cenpq|83815|centromere protein Q	AK076094|Cenpq|83815|centromere protein Q	AK011998|Cenpq|83815|centromere protein Q	AK012179|Cenpq|83815|centromere protein Q	AK020040|Cenpq|83815|centromere protein Q	NM_031863|Cenpq|83815|centromere protein Q	AK157569|Cenpq|83815|centromere protein Q
mm9_v1_chr10_-_79862210_79862261	1.09081	HIF1A.p2	AF072248|Mbd3|17192|methyl-CpG binding domain protein 3	NM_013595|Mbd3|17192|methyl-CpG binding domain protein 3
mm9_v1_chr5_-_144775583_144775788	1.09007	HIF1A.p2	AK213761|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC048077|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_177682|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK090008|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK171671|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK172392|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK146704|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK150793|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152328|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK152576|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK153160|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK164888|Ccz1|231874|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
mm9_v1_chr5_-_134790544_134790615	1.08898	HIF1A.p2	AF017085|Gtf2i|14886|general transcription factor II I	AY030290|Gtf2i|14886|general transcription factor II I	AY030291|Gtf2i|14886|general transcription factor II I	AY030292|Gtf2i|14886|general transcription factor II I	AY030293|Gtf2i|14886|general transcription factor II I	AK147201|Gtf2i|14886|general transcription factor II I	BC053044|Gtf2i|14886|general transcription factor II I	NM_001080746|Gtf2i|14886|general transcription factor II I	NM_001080747|Gtf2i|14886|general transcription factor II I	NM_001080748|Gtf2i|14886|general transcription factor II I	NM_001080749|Gtf2i|14886|general transcription factor II I	NM_010365|Gtf2i|14886|general transcription factor II I
mm9_v1_chr10_+_36694322_36694389	1.08591	HIF1A.p2	AK165734|Hdac2|15182|histone deacetylase 2	NM_008229|Hdac2|15182|histone deacetylase 2	AK051753|Hdac2|15182|histone deacetylase 2	BC138517|Hdac2|15182|histone deacetylase 2	U31758|Hdac2|15182|histone deacetylase 2
mm9_v1_chr1_-_157264358_157264387	1.08268	HIF1A.p2	HQ022853|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131096|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131098|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF131102|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF198104|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ022845|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323679|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	HQ323680|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr6_+_91634056_91634194	1.07721	HIF1A.p2	NM_009320|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK041141|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	L03292|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK143510|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	AK162776|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6	BC015245|Slc6a6|21366|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm9_v1_chr3_+_108456817_108456934	1.07444	HIF1A.p2	NM_145543|Clcc1|229725|chloride channel CLIC-like 1	AK169803|Clcc1|229725|chloride channel CLIC-like 1	NM_001177771|Clcc1|229725|chloride channel CLIC-like 1	AK090092|Clcc1|229725|chloride channel CLIC-like 1	AK143631|Clcc1|229725|chloride channel CLIC-like 1	AK171296|Clcc1|229725|chloride channel CLIC-like 1	NM_001177770|Clcc1|229725|chloride channel CLIC-like 1	AK179081|Clcc1|229725|chloride channel CLIC-like 1
mm9_v1_chr4_-_127008079_127008087	1.07248	HIF1A.p2	NM_001160012|Gjb3|14620|gap junction protein, beta 3	AY390400|Gjb3|14620|gap junction protein, beta 3
mm9_v1_chr4_-_149356331_149356331	1.07247	HIF1A.p2	AK169086|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm9_v1_chr9_+_44215777_44215823	1.06983	HIF1A.p2	AK169736|Rps25|75617|ribosomal protein S25	AK012696|Rps25|75617|ribosomal protein S25	BC079541|Rps25|75617|ribosomal protein S25	BC094392|Rps25|75617|ribosomal protein S25	NM_024266|Rps25|75617|ribosomal protein S25	BC092005|Rps25|75617|ribosomal protein S25	AK077450|Rps25|75617|ribosomal protein S25
mm9_v1_chr7_-_52689639_52689678	1.061	HIF1A.p2	AK135404|Ruvbl2|20174|RuvB-like protein 2	AK144156|Ruvbl2|20174|RuvB-like protein 2	BC116693|Ruvbl2|20174|RuvB-like protein 2	BC115809|Ruvbl2|20174|RuvB-like protein 2	AB013912|Ruvbl2|20174|RuvB-like protein 2
mm9_v1_chr8_-_112132276_112132319	1.06083	HIF1A.p2	AF029667|Dhodh|56749|dihydroorotate dehydrogenase	BC019542|Dhodh|56749|dihydroorotate dehydrogenase	AK088863|Dhodh|56749|dihydroorotate dehydrogenase	AK149350|Dhodh|56749|dihydroorotate dehydrogenase
mm9_v1_chr9_+_44205032_44205053	1.05527	HIF1A.p2	AK147849|Slc37a4|14385|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm9_v1_chr12_-_32319353_32319551	1.05451	HIF1A.p2	BC003303|Bcap29|12033|B-cell receptor-associated protein 29	BC021661|Bcap29|12033|B-cell receptor-associated protein 29	NM_007530|Bcap29|12033|B-cell receptor-associated protein 29	AK090068|Bcap29|12033|B-cell receptor-associated protein 29	AK144754|Bcap29|12033|B-cell receptor-associated protein 29	NM_001164090|Bcap29|12033|B-cell receptor-associated protein 29
mm9_v1_chr5_+_109123159_109123286	1.05409	HIF1A.p2	NM_001164259|Fgfrl1|116701|fibroblast growth factor receptor-like 1	NM_054071|Fgfrl1|116701|fibroblast growth factor receptor-like 1	AF321301|Fgfrl1|116701|fibroblast growth factor receptor-like 1
mm9_v1_chr8_+_73929908_73929953	1.04714	HIF1A.p2	NM_172756|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK080768|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK087444|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK049395|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK078830|Ankle1|234396|ankyrin repeat and LEM domain containing 1	BC030436|Ankle1|234396|ankyrin repeat and LEM domain containing 1	AK083552|Ankle1|234396|ankyrin repeat and LEM domain containing 1	EU184014|Ankle1|234396|ankyrin repeat and LEM domain containing 1	BC094316|Ankle1|234396|ankyrin repeat and LEM domain containing 1
mm9_v1_chr8_-_108375786_108375962	1.04697	HIF1A.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr5_-_144670646_144670709	1.04621	HIF1A.p2	BC026958|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024410|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC026972|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024480|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_001172146|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_146165|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
mm9_v1_chr10_+_79317409_79317433	1.04462	HIF1A.p2	AK033319|Ptbp1|19205|polypyrimidine tract binding protein 1	AK041143|Ptbp1|19205|polypyrimidine tract binding protein 1	AK051669|Ptbp1|19205|polypyrimidine tract binding protein 1	AK088126|Ptbp1|19205|polypyrimidine tract binding protein 1	AK036745|Ptbp1|19205|polypyrimidine tract binding protein 1	AK050498|Ptbp1|19205|polypyrimidine tract binding protein 1	AK053926|Ptbp1|19205|polypyrimidine tract binding protein 1	AK088483|Ptbp1|19205|polypyrimidine tract binding protein 1	AK149941|Ptbp1|19205|polypyrimidine tract binding protein 1	AK168359|Ptbp1|19205|polypyrimidine tract binding protein 1	BC028848|Ptbp1|19205|polypyrimidine tract binding protein 1	X52101|Ptbp1|19205|polypyrimidine tract binding protein 1	BC086489|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr10_-_79811127_79811223	1.04307	HIF1A.p2	AK029081|Adamtsl5|66548|ADAMTS-like 5	AK008440|Adamtsl5|66548|ADAMTS-like 5	AK008355|Adamtsl5|66548|ADAMTS-like 5	AK008364|Adamtsl5|66548|ADAMTS-like 5	AK148933|Adamtsl5|66548|ADAMTS-like 5	NM_025629|Adamtsl5|66548|ADAMTS-like 5	NM_001113548|Adamtsl5|66548|ADAMTS-like 5
mm9_v1_chr5_-_74927649_74927773	1.04284	HIF1A.p2	AK088353|Scfd2|212986|Sec1 family domain containing 2	AK036637|Scfd2|212986|Sec1 family domain containing 2	AK047738|Scfd2|212986|Sec1 family domain containing 2	AK050673|Scfd2|212986|Sec1 family domain containing 2	AK054548|Scfd2|212986|Sec1 family domain containing 2	AK163028|Scfd2|212986|Sec1 family domain containing 2	AK089153|Scfd2|212986|Sec1 family domain containing 2	AK044408|Scfd2|212986|Sec1 family domain containing 2	AK143615|Scfd2|212986|Sec1 family domain containing 2	AK034000|Scfd2|212986|Sec1 family domain containing 2	BC042528|Scfd2|212986|Sec1 family domain containing 2	AK140246|Scfd2|212986|Sec1 family domain containing 2	AK153621|Scfd2|212986|Sec1 family domain containing 2	NM_001114660|Scfd2|212986|Sec1 family domain containing 2	NM_178672|Scfd2|212986|Sec1 family domain containing 2
mm9_v1_chr13_+_55546808_55546869	1.04193	HIF1A.p2	AK146119|Grk6|26385|G protein-coupled receptor kinase 6	AF040747|Grk6|26385|G protein-coupled receptor kinase 6	AF040748|Grk6|26385|G protein-coupled receptor kinase 6	AF040749|Grk6|26385|G protein-coupled receptor kinase 6	BC075719|Grk6|26385|G protein-coupled receptor kinase 6	Y15798|Grk6|26385|G protein-coupled receptor kinase 6	Y15799|Grk6|26385|G protein-coupled receptor kinase 6	Y15797|Grk6|26385|G protein-coupled receptor kinase 6	Y15800|Grk6|26385|G protein-coupled receptor kinase 6
mm9_v1_chr3_-_58329639_58329732	1.04073	HIF1A.p2	AK167482|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK050508|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150809|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151323|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153056|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153118|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153286|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166052|Serp1|28146|stress-associated endoplasmic reticulum protein 1	BC002114|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151384|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166004|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150659|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152373|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152882|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153138|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK075776|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK144732|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151669|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152583|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153415|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169049|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK167952|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150005|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150025|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150368|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150770|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151853|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152383|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168569|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168754|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168947|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AB041655|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK032680|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK148485|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150428|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150714|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151456|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152636|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152806|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152996|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK159271|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK161595|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168046|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169175|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK170734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK002653|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK149786|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr2_-_32549637_32549722	1.03943	HIF1A.p2	BC005484|Fpgs|14287|folylpolyglutamyl synthetase	U32197|Fpgs|14287|folylpolyglutamyl synthetase	AK041952|Fpgs|14287|folylpolyglutamyl synthetase	AK157040|Fpgs|14287|folylpolyglutamyl synthetase	U33557|Fpgs|14287|folylpolyglutamyl synthetase	NM_010236|Fpgs|14287|folylpolyglutamyl synthetase
mm9_v1_chr3_+_60806667_60806845	1.03703	HIF1A.p2	AK030759|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	AK036611|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	NM_008772|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	AK033660|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	BC138634|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1	BC138635|P2ry1|18441|purinergic receptor P2Y, G-protein coupled 1
mm9_v1_chr11_-_109472638_109472693	1.03458	HIF1A.p2	BC024883|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	BC024811|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1
mm9_v1_chr18_+_5591869_5591894	1.03309	HIF1A.p2	AK014114|Zeb1|21417|zinc finger E-box binding homeobox 1	U26259|Zeb1|21417|zinc finger E-box binding homeobox 1	BC139768|Zeb1|21417|zinc finger E-box binding homeobox 1	BC139769|Zeb1|21417|zinc finger E-box binding homeobox 1	D76432|Zeb1|21417|zinc finger E-box binding homeobox 1	NM_011546|Zeb1|21417|zinc finger E-box binding homeobox 1	BC090987|Zeb1|21417|zinc finger E-box binding homeobox 1	AK135371|Zeb1|21417|zinc finger E-box binding homeobox 1
mm9_v1_chr1_-_34496128_34496223	1.03302	HIF1A.p2	AK162237|Ccdc115|69668|coiled-coil domain containing 115	AK154179|Ccdc115|69668|coiled-coil domain containing 115
mm9_v1_chr2_+_74535801_74535819	1.0296	HIF1A.p2	NM_013555|Hoxd9|15438|homeobox D9
mm9_v1_chr11_-_70051361_70051426	1.02921	HIF1A.p2	AK169173|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK170380|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	AK003842|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177601|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177603|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177606|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_001177607|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_026757|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene	NM_145758|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr15_-_36212839_36212867	1.0284	HIF1A.p2	AK082665|Rnf19a|30945|ring finger protein 19A
mm9_v1_chr9_-_66440640_66440842	1.025	HIF1A.p2	AK031141|Usp3|235441|ubiquitin specific peptidase 3	NM_144937|Usp3|235441|ubiquitin specific peptidase 3	AK158516|Usp3|235441|ubiquitin specific peptidase 3	AK161676|Usp3|235441|ubiquitin specific peptidase 3
mm9_v1_chr7_-_129276357_129276498	1.02408	HIF1A.p2	BC066140|Palb2|233826|partner and localizer of BRCA2	AK156701|Palb2|233826|partner and localizer of BRCA2	AK157382|Palb2|233826|partner and localizer of BRCA2	BC066139|Palb2|233826|partner and localizer of BRCA2	BC055302|Palb2|233826|partner and localizer of BRCA2	AK154227|Palb2|233826|partner and localizer of BRCA2	AK028653|Palb2|233826|partner and localizer of BRCA2	NM_001081238|Palb2|233826|partner and localizer of BRCA2
mm9_v1_chr19_-_4615460_4615508	1.01446	HIF1A.p2	AK081560|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr17_-_12511525_12511663	1.01234	HIF1A.p2	BC058719|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	NM_011948|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	U85607|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	U85608|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	AK014185|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	AK035823|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4	AK133605|Map3k4|26407|mitogen-activated protein kinase kinase kinase 4
mm9_v1_chr6_-_97155541_97155640	1.01221	HIF1A.p2	BC002002|Uba3|22200|ubiquitin-like modifier activating enzyme 3	BC080776|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK048148|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK032514|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK166655|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK168859|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK043801|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK014433|Uba3|22200|ubiquitin-like modifier activating enzyme 3	NM_001111106|Uba3|22200|ubiquitin-like modifier activating enzyme 3	NM_011666|Uba3|22200|ubiquitin-like modifier activating enzyme 3	AK159381|Uba3|22200|ubiquitin-like modifier activating enzyme 3
mm9_v1_chr17_-_10512094_10512209	1.01188	HIF1A.p2	BC053426|Qk|19317|quaking
mm9_v1_chr1_+_4797868_4798011	1.00909	HIF1A.p2	AK016021|Lypla1|18777|lysophospholipase 1	BC052848|Lypla1|18777|lysophospholipase 1	AK167231|Lypla1|18777|lysophospholipase 1	AK146874|Lypla1|18777|lysophospholipase 1	AK002674|Lypla1|18777|lysophospholipase 1	BC013536|Lypla1|18777|lysophospholipase 1	NM_008866|Lypla1|18777|lysophospholipase 1	CT010201|Lypla1|18777|lysophospholipase 1	U89352|Lypla1|18777|lysophospholipase 1	AK050549|Lypla1|18777|lysophospholipase 1
mm9_v1_chr1_+_82313187_82313198	1.00902	HIF1A.p2	AK079448|Rhbdd1|76867|rhomboid domain containing 1	AK161153|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr4_-_11118342_11118420	1.00495	HIF1A.p2	AK080292|A630034I12Rik|329790|RIKEN cDNA A630034I12 gene	AK169448|A630034I12Rik|329790|RIKEN cDNA A630034I12 gene
mm9_v1_chr6_+_113647492_113647666	1.00448	HIF1A.p2	AK156197|Tatdn2|381801|TatD DNase domain containing 2	NM_001033463|Tatdn2|381801|TatD DNase domain containing 2	BC141065|Tatdn2|381801|TatD DNase domain containing 2	BC145318|Tatdn2|381801|TatD DNase domain containing 2	AK220217|Tatdn2|381801|TatD DNase domain containing 2
mm9_v1_chr15_+_9001008_9001083	1.00423	HIF1A.p2	AK046666|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001040395|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001085410|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr11_-_95448869_95449017	1.00154	HIF1A.p2	AF105292|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)	BC038365|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)	AK037248|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)	NM_033217|Ngfr|18053|nerve growth factor receptor (TNFR superfamily, member 16)
mm9_v1_chr19_-_38199112_38199170	1.0015	HIF1A.p2	M74527|Rbp4|19662|retinol binding protein 4, plasma	U63146|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr9_+_100543993_100544033	1.00112	HIF1A.p2	Z75332|Stag1|20842|stromal antigen 1	AK134316|Stag1|20842|stromal antigen 1
mm9_v1_chr9_-_57493393_57493475	0.998437	HIF1A.p2	AK136876|Csk|12988|c-src tyrosine kinase
mm9_v1_chr9_+_107457062_107457103	0.997121	HIF1A.p2	AF132851|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1
mm9_v1_chr1_-_17087915_17087981	0.996625	HIF1A.p2	BC120839|Jph1|57339|junctophilin 1	BC137669|Jph1|57339|junctophilin 1
mm9_v1_chr10_-_79896086_79896137	0.996586	HIF1A.p2	AF352579|Tcf3|21423|transcription factor 3
mm9_v1_chr6_+_29476655_29476748	0.996143	HIF1A.p2	AK150598|Irf5|27056|interferon regulatory factor 5	AK152042|Irf5|27056|interferon regulatory factor 5	AK171356|Irf5|27056|interferon regulatory factor 5	AK151019|Irf5|27056|interferon regulatory factor 5	AF028725|Irf5|27056|interferon regulatory factor 5	NM_012057|Irf5|27056|interferon regulatory factor 5
mm9_v1_chr12_+_81891479_81891592	0.995446	HIF1A.p2	AK030233|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK161132|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK143867|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	BC040401|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	NM_178682|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK151939|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK152820|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK164823|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr11_-_88579517_88579542	0.995167	HIF1A.p2	AK156439|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049637|Msi2|76626|Musashi homolog 2 (Drosophila)	AK049688|Msi2|76626|Musashi homolog 2 (Drosophila)	NM_054043|Msi2|76626|Musashi homolog 2 (Drosophila)
mm9_v1_chr17_-_35137690_35137738	0.992429	HIF1A.p2	L78788|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5	AK088743|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr2_+_38367184_38367395	0.991204	HIF1A.p2	AK029266|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AF218847|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_021606|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK086700|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK011519|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075836|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK018168|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK004925|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075717|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK089919|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	BC019524|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK170757|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_001159631|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr15_+_55139304_55139473	0.990729	HIF1A.p2	AK017553|Col14a1|12818|collagen, type XIV, alpha 1	NM_181277|Col14a1|12818|collagen, type XIV, alpha 1	AY221110|Col14a1|12818|collagen, type XIV, alpha 1	BC138345|Col14a1|12818|collagen, type XIV, alpha 1	BC145244|Col14a1|12818|collagen, type XIV, alpha 1
mm9_v1_chrX_+_72661966_72662056	0.989986	HIF1A.p2	NM_001166457|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_001166459|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	NM_145956|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	S68022|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK149844|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK028483|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK030736|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC021313|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK038919|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	AK011876|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3	BC048179|Brcc3|210766|BRCA1/BRCA2-containing complex, subunit 3
mm9_v1_chr3_+_82859489_82859512	0.989104	HIF1A.p2	BC006750|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	BC052895|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr8_+_87356149_87356307	0.988826	HIF1A.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr8_-_13890244_13890296	0.984388	HIF1A.p2	BC029192|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK010573|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	AK008882|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene	NM_025556|2410022L05Rik|66423|RIKEN cDNA 2410022L05 gene
mm9_v1_chrX_-_91368427_91368500	0.982681	HIF1A.p2	BC028506|Zfx|22764|zinc finger protein X-linked	M32308|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr4_-_132478424_132478474	0.980921	HIF1A.p2	BC008163|Fam76a|230789|family with sequence similarity 76, member A	AK154575|Fam76a|230789|family with sequence similarity 76, member A	NM_001163792|Fam76a|230789|family with sequence similarity 76, member A	NM_145553|Fam76a|230789|family with sequence similarity 76, member A	AK038831|Fam76a|230789|family with sequence similarity 76, member A
mm9_v1_chrX_-_165758200_165758305	0.980548	HIF1A.p2	AK077566|Hccs|15159|holocytochrome c synthetase	BC061466|Hccs|15159|holocytochrome c synthetase	BC062905|Hccs|15159|holocytochrome c synthetase	NM_008222|Hccs|15159|holocytochrome c synthetase	AK143150|Hccs|15159|holocytochrome c synthetase	AK028608|Hccs|15159|holocytochrome c synthetase
mm9_v1_chr12_-_71212591_71212711	0.977178	HIF1A.p2	AK141891|Nin|18080|ninein	AK134860|Nin|18080|ninein
mm9_v1_chr13_+_73398198_73398306	0.973734	HIF1A.p2	AF124732|Irx4|50916|Iroquois related homeobox 4 (Drosophila)	BC126942|Irx4|50916|Iroquois related homeobox 4 (Drosophila)
mm9_v1_chr14_-_21871345_21871395	0.973429	HIF1A.p2	BC024595|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr17_+_57388873_57388970	0.973168	HIF1A.p2	NM_134125|Trip10|106628|thyroid hormone receptor interactor 10	BC003249|Trip10|106628|thyroid hormone receptor interactor 10	AK149902|Trip10|106628|thyroid hormone receptor interactor 10	AY081142|Trip10|106628|thyroid hormone receptor interactor 10	AK088909|Trip10|106628|thyroid hormone receptor interactor 10	AF502565|Trip10|106628|thyroid hormone receptor interactor 10
mm9_v1_chr10_+_122116066_122116255	0.968589	HIF1A.p2	AK040194|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK029461|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)	AK150309|Ppm1h|319468|protein phosphatase 1H (PP2C domain containing)
mm9_v1_chr11_-_101645834_101645863	0.965522	HIF1A.p2	DQ832277|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr6_-_116578970_116579010	0.960234	HIF1A.p2	AK152681|Zfp422|67255|zinc finger protein 422	AK082970|Zfp422|67255|zinc finger protein 422	NM_026057|Zfp422|67255|zinc finger protein 422
mm9_v1_chr5_-_106887469_106887485	0.957952	HIF1A.p2	BC055789|Barhl2|104382|BarH-like 2 (Drosophila)
mm9_v1_chr4_+_131429522_131429622	0.955824	HIF1A.p2	NM_020587|Srsf4|57317|serine/arginine-rich splicing factor 4	AK077648|Srsf4|57317|serine/arginine-rich splicing factor 4	AK075769|Srsf4|57317|serine/arginine-rich splicing factor 4	BC019437|Srsf4|57317|serine/arginine-rich splicing factor 4	AK156989|Srsf4|57317|serine/arginine-rich splicing factor 4
mm9_v1_chr3_+_82859422_82859482	0.952742	HIF1A.p2	AK080068|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK077197|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	NM_016784|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK075993|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK076007|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr9_+_72773456_72773456	0.949703	HIF1A.p2	AK011208|Pygo1|72135|pygopus 1	NM_028116|Pygo1|72135|pygopus 1
mm9_v1_chr4_-_129318200_129318260	0.947733	HIF1A.p2	AK141252|Txlna|109658|taxilin alpha
mm9_v1_chr17_+_23816331_23816354	0.946679	HIF1A.p2	AK010560|Cldn6|54419|claudin 6	NM_018777|Cldn6|54419|claudin 6	AK010682|Cldn6|54419|claudin 6	BC050138|Cldn6|54419|claudin 6	BC005718|Cldn6|54419|claudin 6
mm9_v1_chr7_-_85992096_85992145	0.943837	HIF1A.p2	BC031930|Det1|76375|de-etiolated homolog 1 (Arabidopsis)	NM_029585|Det1|76375|de-etiolated homolog 1 (Arabidopsis)	AK011666|Det1|76375|de-etiolated homolog 1 (Arabidopsis)
mm9_v1_chr3_-_116510948_116511083	0.943391	HIF1A.p2	AK087855|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	AK041661|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	AK036225|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase	NM_001081326|Agl|77559|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm9_v1_chr4_-_141279303_141279379	0.941948	HIF1A.p2	BC021415|Ddi2|68817|DNA-damage inducible protein 2	AK129015|Ddi2|68817|DNA-damage inducible protein 2	NM_001017966|Ddi2|68817|DNA-damage inducible protein 2
mm9_v1_chr1_+_82313139_82313186	0.940555	HIF1A.p2	NM_029777|Rhbdd1|76867|rhomboid domain containing 1	AK142277|Rhbdd1|76867|rhomboid domain containing 1	AK029751|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr9_+_98856025_98856025	0.938017	HIF1A.p2	BC137811|Foxl2|26927|forkhead box L2	BC137812|Foxl2|26927|forkhead box L2	NM_012020|Foxl2|26927|forkhead box L2
mm9_v1_chr13_-_13485585_13485897	0.937632	HIF1A.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK185470|Gpr137b|83924|G protein-coupled receptor 137B	AK050369|Gpr137b|83924|G protein-coupled receptor 137B	AK080884|Gpr137b|83924|G protein-coupled receptor 137B	AK172286|Gpr137b|83924|G protein-coupled receptor 137B	AK147921|Gpr137b|83924|G protein-coupled receptor 137B	BC003212|Gpr137b|83924|G protein-coupled receptor 137B	AK128965|Gpr137b|83924|G protein-coupled receptor 137B	NM_031999|Gpr137b|83924|G protein-coupled receptor 137B
mm9_v1_chr8_+_107694536_107694875	0.936515	HIF1A.p2	AK089094|Cbfb|12400|core binding factor beta	NM_001161456|Cbfb|12400|core binding factor beta	NM_001161457|Cbfb|12400|core binding factor beta	NM_001161458|Cbfb|12400|core binding factor beta	NM_022309|Cbfb|12400|core binding factor beta	D14570|Cbfb|12400|core binding factor beta	D14571|Cbfb|12400|core binding factor beta	D14572|Cbfb|12400|core binding factor beta	BC026749|Cbfb|12400|core binding factor beta	BC040752|Cbfb|12400|core binding factor beta	BC006763|Cbfb|12400|core binding factor beta	L03305|Cbfb|12400|core binding factor beta	L03306|Cbfb|12400|core binding factor beta
mm9_v1_chr15_-_58913543_58913652	0.93541	HIF1A.p2	BC024131|Mtss1|211401|metastasis suppressor 1	AK083756|Mtss1|211401|metastasis suppressor 1	AK046628|Mtss1|211401|metastasis suppressor 1	AK129139|Mtss1|211401|metastasis suppressor 1	NM_001146180|Mtss1|211401|metastasis suppressor 1	NM_144800|Mtss1|211401|metastasis suppressor 1
mm9_v1_chr13_-_117814079_117814204	0.935098	HIF1A.p2	AK150732|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK151510|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK152919|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK153169|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK153270|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK150113|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	BC021881|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK149889|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK149918|Parp8|52552|poly (ADP-ribose) polymerase family, member 8	AK150208|Parp8|52552|poly (ADP-ribose) polymerase family, member 8
mm9_v1_chr12_+_8680904_8680950	0.933472	HIF1A.p2	AK134185|Pum2|80913|pumilio 2 (Drosophila)	NM_001160221|Pum2|80913|pumilio 2 (Drosophila)	NM_001160222|Pum2|80913|pumilio 2 (Drosophila)	AK163964|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr10_+_79578561_79578596	0.930772	HIF1A.p2	AK172528|Stk11|20869|serine/threonine kinase 11
mm9_v1_chr8_-_94879643_94879671	0.92821	HIF1A.p2	AK181465|4933436C20Rik|71296|RIKEN cDNA 4933436C20 gene
mm9_v1_chr10_-_79785786_79785871	0.926786	HIF1A.p2	BC052535|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4
mm9_v1_chr7_-_134655863_134655912	0.925591	HIF1A.p2	BC049754|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene	AK131716|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene	AK005774|1700008J07Rik|629159|RIKEN cDNA 1700008J07 gene
mm9_v1_chr16_+_35541447_35541447	0.922475	HIF1A.p2	BC052397|Sema5b|20357|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	NM_013661|Sema5b|20357|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
mm9_v1_chr7_+_135689619_135689645	0.920302	HIF1A.p2	AK215244|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr16_+_52031704_52031719	0.920227	HIF1A.p2	BC150934|Cblb|208650|Casitas B-lineage lymphoma b	BC150938|Cblb|208650|Casitas B-lineage lymphoma b	AK156295|Cblb|208650|Casitas B-lineage lymphoma b	AK171350|Cblb|208650|Casitas B-lineage lymphoma b
mm9_v1_chr3_-_105604199_105604320	0.91701	HIF1A.p2	AK152504|Rap1a|109905|RAS-related protein-1a	AK030897|Rap1a|109905|RAS-related protein-1a	BC051419|Rap1a|109905|RAS-related protein-1a	NM_145541|Rap1a|109905|RAS-related protein-1a
mm9_v1_chr5_-_89104575_89104676	0.916576	HIF1A.p2	AK168385|Grsf1|231413|G-rich RNA sequence binding factor 1	AK168459|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_001098476|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr4_-_129317895_129318048	0.91594	HIF1A.p2	AK135290|Txlna|109658|taxilin alpha	AK160829|Txlna|109658|taxilin alpha	AK168418|Txlna|109658|taxilin alpha
mm9_v1_chr17_+_69733141_69733317	0.915886	HIF1A.p2	AK082051|Zfp161|22666|zinc finger protein 161	AK037725|Zfp161|22666|zinc finger protein 161	AK136762|Zfp161|22666|zinc finger protein 161	BC052017|Zfp161|22666|zinc finger protein 161	NM_009547|Zfp161|22666|zinc finger protein 161
mm9_v1_chr17_-_15664238_15664282	0.915152	HIF1A.p2	DQ906042|Pdcd2|18567|programmed cell death 2	U10903|Pdcd2|18567|programmed cell death 2	AK045985|Pdcd2|18567|programmed cell death 2	NM_008799|Pdcd2|18567|programmed cell death 2
mm9_v1_chr14_-_70751120_70751274	0.914705	HIF1A.p2	AK158096|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	AB177995|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	BC021530|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_001135151|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14	NM_144808|Slc39a14|213053|solute carrier family 39 (zinc transporter), member 14
mm9_v1_chr12_-_76770488_76770523	0.913773	HIF1A.p2	BC111903|Wdr89|72338|WD repeat domain 89	BC112430|Wdr89|72338|WD repeat domain 89	AK011125|Wdr89|72338|WD repeat domain 89	NM_028203|Wdr89|72338|WD repeat domain 89
mm9_v1_chr13_+_51196154_51196300	0.912461	HIF1A.p2	AK168544|Spin1|20729|spindlin 1	NM_146043|Spin1|20729|spindlin 1	BC016517|Spin1|20729|spindlin 1	AK134259|Spin1|20729|spindlin 1
mm9_v1_chr17_+_88840048_88840164	0.912293	HIF1A.p2	NM_180974|Foxn2|14236|forkhead box N2	AK154401|Foxn2|14236|forkhead box N2	AK030735|Foxn2|14236|forkhead box N2	AK031639|Foxn2|14236|forkhead box N2	BC138824|Foxn2|14236|forkhead box N2	BC138825|Foxn2|14236|forkhead box N2
mm9_v1_chr7_+_86040793_86040943	0.910533	HIF1A.p2	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr1_-_57463517_57463543	0.91006	HIF1A.p2	BC023868|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	NM_001037742|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	NM_001114102|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene
mm9_v1_chr5_-_66089061_66089225	0.909908	HIF1A.p2	NM_001081321|Pds5a|71521|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
mm9_v1_chr16_-_11134587_11134761	0.907238	HIF1A.p2	AK157288|Txndc11|106200|thioredoxin domain containing 11	BC029643|Txndc11|106200|thioredoxin domain containing 11	NM_029582|Txndc11|106200|thioredoxin domain containing 11	AK156154|Txndc11|106200|thioredoxin domain containing 11	AK170352|Txndc11|106200|thioredoxin domain containing 11	AK013044|Txndc11|106200|thioredoxin domain containing 11	AK155844|Txndc11|106200|thioredoxin domain containing 11	AK159484|Txndc11|106200|thioredoxin domain containing 11	BC020363|Txndc11|106200|thioredoxin domain containing 11	AK139620|Txndc11|106200|thioredoxin domain containing 11	AK157948|Txndc11|106200|thioredoxin domain containing 11	AK156590|Txndc11|106200|thioredoxin domain containing 11	AK029166|Txndc11|106200|thioredoxin domain containing 11
mm9_v1_chr6_+_28373521_28373688	0.907053	HIF1A.p2	BC132452|Arf5|11844|ADP-ribosylation factor 5	BC138756|Arf5|11844|ADP-ribosylation factor 5	D87902|Arf5|11844|ADP-ribosylation factor 5	NM_007480|Arf5|11844|ADP-ribosylation factor 5
mm9_v1_chr9_-_107191674_107191745	0.90247	HIF1A.p2	DQ899946|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3	AK087496|Mapkapk3|102626|mitogen-activated protein kinase-activated protein kinase 3
mm9_v1_chr2_+_140221224_140221330	0.9024	HIF1A.p2	BC038317|Macrod2|72899|MACRO domain containing 2	BC027552|Macrod2|72899|MACRO domain containing 2	BC028443|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr7_+_52825672_52825751	0.901937	HIF1A.p2	AK037482|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	AF031467|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC048072|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	NM_009737|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	U68526|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC017688|Bcat2|12036|branched chain aminotransferase 2, mitochondrial
mm9_v1_chr10_-_79850388_79850445	0.898094	HIF1A.p2	NM_198615|Mex3d|237400|mex3 homolog D (C. elegans)
mm9_v1_chr18_-_80909796_80909814	0.897029	HIF1A.p2	BC061509|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK048610|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK144965|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164109|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164110|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_198429|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr7_+_126937608_126937700	0.895153	HIF1A.p2	AK011486|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	NM_028129|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	AK084640|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	BC053445|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene	NM_001004187|2610020H08Rik|434234|RIKEN cDNA 2610020H08 gene
mm9_v1_chr3_-_19211000_19211321	0.894333	HIF1A.p2	AY007702|Pde7a|18583|phosphodiesterase 7A	AK154521|Pde7a|18583|phosphodiesterase 7A	BC062909|Pde7a|18583|phosphodiesterase 7A	NM_001122759|Pde7a|18583|phosphodiesterase 7A
mm9_v1_chr15_-_57723866_57723934	0.889087	HIF1A.p2	AK075631|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr8_-_86222963_86223117	0.888102	HIF1A.p2	AK134792|Pkn1|320795|protein kinase N1	BC052923|Pkn1|320795|protein kinase N1	NM_177262|Pkn1|320795|protein kinase N1	AK170556|Pkn1|320795|protein kinase N1	AK050643|Pkn1|320795|protein kinase N1
mm9_v1_chr12_-_86113948_86114061	0.884952	HIF1A.p2	AK158624|Npc2|67963|Niemann Pick type C2	NM_023409|Npc2|67963|Niemann Pick type C2
mm9_v1_chr17_+_87362612_87362644	0.881947	HIF1A.p2	AB060650|Rhoq|104215|ras homolog gene family, member Q	BC048813|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr3_-_132346782_132346852	0.880358	HIF1A.p2	AK133859|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK160506|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	U10118|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK036573|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK087932|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	BC002054|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	AK050571|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	NM_007926|Aimp1|13722|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
mm9_v1_chr1_+_42908077_42908173	0.880224	HIF1A.p2	NM_023514|Mrps9|69527|mitochondrial ribosomal protein S9	AK049465|Mrps9|69527|mitochondrial ribosomal protein S9	AK144656|Mrps9|69527|mitochondrial ribosomal protein S9	AK150985|Mrps9|69527|mitochondrial ribosomal protein S9	AK031497|Mrps9|69527|mitochondrial ribosomal protein S9	AK009082|Mrps9|69527|mitochondrial ribosomal protein S9	BC116437|Mrps9|69527|mitochondrial ribosomal protein S9
mm9_v1_chr3_+_135101314_135101542	0.879963	HIF1A.p2	AK151295|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153100|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK077666|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK153423|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	AK159125|Ube2d3|66105|ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)
mm9_v1_chr12_+_25336138_25336389	0.878725	HIF1A.p2	AK038397|Klf11|194655|Kruppel-like factor 11	AK050156|Klf11|194655|Kruppel-like factor 11	NM_178357|Klf11|194655|Kruppel-like factor 11	BC060642|Klf11|194655|Kruppel-like factor 11	AK161233|Klf11|194655|Kruppel-like factor 11	AK082838|Klf11|194655|Kruppel-like factor 11	AK036618|Klf11|194655|Kruppel-like factor 11	AK089044|Klf11|194655|Kruppel-like factor 11	AK084913|Klf11|194655|Kruppel-like factor 11	AK085319|Klf11|194655|Kruppel-like factor 11	AK054170|Klf11|194655|Kruppel-like factor 11	AJ459773|Klf11|194655|Kruppel-like factor 11
mm9_v1_chr7_+_16894925_16895103	0.875231	HIF1A.p2	NM_133234|Bbc3|170770|BCL2 binding component 3	BC044782|Bbc3|170770|BCL2 binding component 3	AF332560|Bbc3|170770|BCL2 binding component 3	BC060370|Bbc3|170770|BCL2 binding component 3	BC147261|Bbc3|170770|BCL2 binding component 3	BC147262|Bbc3|170770|BCL2 binding component 3
mm9_v1_chr19_-_7061867_7061910	0.874412	HIF1A.p2	U43837|Vegfb|22340|vascular endothelial growth factor B	AK187930|Vegfb|22340|vascular endothelial growth factor B	AK184156|Vegfb|22340|vascular endothelial growth factor B	AK184635|Vegfb|22340|vascular endothelial growth factor B
mm9_v1_chr15_-_88971039_88971132	0.872918	HIF1A.p2	BC021640|Mapk12|29857|mitogen-activated protein kinase 12	Y13439|Mapk12|29857|mitogen-activated protein kinase 12	AK011286|Mapk12|29857|mitogen-activated protein kinase 12	AK165741|Mapk12|29857|mitogen-activated protein kinase 12	NM_013871|Mapk12|29857|mitogen-activated protein kinase 12
mm9_v1_chr19_+_47253657_47253740	0.870742	HIF1A.p2	AF400063|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr5_-_3647805_3647982	0.868499	HIF1A.p2	BC019449|Gatad1|67210|GATA zinc finger domain containing 1	AK078416|Gatad1|67210|GATA zinc finger domain containing 1	AB047921|Gatad1|67210|GATA zinc finger domain containing 1	AK012921|Gatad1|67210|GATA zinc finger domain containing 1	NM_026033|Gatad1|67210|GATA zinc finger domain containing 1
mm9_v1_chr10_+_19311761_19311893	0.865358	HIF1A.p2	NM_010511|Ifngr1|15979|interferon gamma receptor 1	AK087525|Ifngr1|15979|interferon gamma receptor 1	M26711|Ifngr1|15979|interferon gamma receptor 1	M28233|Ifngr1|15979|interferon gamma receptor 1	AK169593|Ifngr1|15979|interferon gamma receptor 1	J05265|Ifngr1|15979|interferon gamma receptor 1	AK151079|Ifngr1|15979|interferon gamma receptor 1	AK159359|Ifngr1|15979|interferon gamma receptor 1	AF128216|Ifngr1|15979|interferon gamma receptor 1	AF128217|Ifngr1|15979|interferon gamma receptor 1	AY157836|Ifngr1|15979|interferon gamma receptor 1	AY157837|Ifngr1|15979|interferon gamma receptor 1	AK153347|Ifngr1|15979|interferon gamma receptor 1	AK150503|Ifngr1|15979|interferon gamma receptor 1	AK152085|Ifngr1|15979|interferon gamma receptor 1	AK152384|Ifngr1|15979|interferon gamma receptor 1	AK153084|Ifngr1|15979|interferon gamma receptor 1	BC132599|Ifngr1|15979|interferon gamma receptor 1	BC138617|Ifngr1|15979|interferon gamma receptor 1	M25764|Ifngr1|15979|interferon gamma receptor 1	AK159660|Ifngr1|15979|interferon gamma receptor 1	AK159839|Ifngr1|15979|interferon gamma receptor 1	M28995|Ifngr1|15979|interferon gamma receptor 1
mm9_v1_chr19_+_5088537_5088585	0.861511	HIF1A.p2	AK011071|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK077329|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	NM_026553|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK160409|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)
mm9_v1_chr11_-_77990151_77990167	0.860468	HIF1A.p2	NM_080849|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8
mm9_v1_chr11_-_116485513_116485568	0.860081	HIF1A.p2	BC052182|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK154639|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK042365|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK171085|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	NM_001167680|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AY167043|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)
mm9_v1_chr14_-_71166340_71166465	0.859969	HIF1A.p2	AJ297360|Xpo7|65246|exportin 7	AK041768|Xpo7|65246|exportin 7	AK051105|Xpo7|65246|exportin 7	AK035775|Xpo7|65246|exportin 7	BC029702|Xpo7|65246|exportin 7	AK164595|Xpo7|65246|exportin 7	NM_023045|Xpo7|65246|exportin 7
mm9_v1_chr17_-_24345953_24346086	0.859557	HIF1A.p2	AF149094|Ntn3|18209|netrin 3	AF152418|Ntn3|18209|netrin 3
mm9_v1_chr17_+_24857052_24857220	0.855494	HIF1A.p2	AK012360|Rps2|16898|ribosomal protein S2	AK146259|Rps2|16898|ribosomal protein S2	AK166664|Rps2|16898|ribosomal protein S2	BC087956|Rps2|16898|ribosomal protein S2	AK004568|Rps2|16898|ribosomal protein S2	AK019265|Rps2|16898|ribosomal protein S2	AK151119|Rps2|16898|ribosomal protein S2	AK151985|Rps2|16898|ribosomal protein S2	AK152299|Rps2|16898|ribosomal protein S2	AK159121|Rps2|16898|ribosomal protein S2	AK159138|Rps2|16898|ribosomal protein S2	AK163821|Rps2|16898|ribosomal protein S2	AK166549|Rps2|16898|ribosomal protein S2	AK166726|Rps2|16898|ribosomal protein S2	AK167799|Rps2|16898|ribosomal protein S2	AK167974|Rps2|16898|ribosomal protein S2	AK168307|Rps2|16898|ribosomal protein S2	AK168528|Rps2|16898|ribosomal protein S2	AK169119|Rps2|16898|ribosomal protein S2	AK167033|Rps2|16898|ribosomal protein S2	AK168630|Rps2|16898|ribosomal protein S2	BC002186|Rps2|16898|ribosomal protein S2	BC091730|Rps2|16898|ribosomal protein S2	BC091755|Rps2|16898|ribosomal protein S2	BC092286|Rps2|16898|ribosomal protein S2	BC094058|Rps2|16898|ribosomal protein S2	BC094273|Rps2|16898|ribosomal protein S2	BC106136|Rps2|16898|ribosomal protein S2	BC110678|Rps2|16898|ribosomal protein S2	BC116446|Rps2|16898|ribosomal protein S2	BC093493|Rps2|16898|ribosomal protein S2	BC117558|Rps2|16898|ribosomal protein S2	AF283559|Rps2|16898|ribosomal protein S2
mm9_v1_chr9_+_64880208_64880292	0.854246	HIF1A.p2	AK155605|Dpp8|74388|dipeptidylpeptidase 8	BC043124|Dpp8|74388|dipeptidylpeptidase 8	BC059222|Dpp8|74388|dipeptidylpeptidase 8	NM_028906|Dpp8|74388|dipeptidylpeptidase 8
mm9_v1_chr15_+_102162136_102162200	0.854028	HIF1A.p2	NM_021713|Myg1|60315|melanocyte proliferating gene 1	AF289484|Myg1|60315|melanocyte proliferating gene 1	BC028501|Myg1|60315|melanocyte proliferating gene 1	AK017955|Myg1|60315|melanocyte proliferating gene 1	AK002656|Myg1|60315|melanocyte proliferating gene 1	AK004104|Myg1|60315|melanocyte proliferating gene 1	BC023124|Myg1|60315|melanocyte proliferating gene 1	AK013232|Myg1|60315|melanocyte proliferating gene 1
mm9_v1_chr12_+_30622876_30622919	0.851083	HIF1A.p2	AK142872|Pxdn|69675|peroxidasin homolog (Drosophila)	NM_181395|Pxdn|69675|peroxidasin homolog (Drosophila)	BC150789|Pxdn|69675|peroxidasin homolog (Drosophila)	AK054255|Pxdn|69675|peroxidasin homolog (Drosophila)	AK163597|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr14_-_70842971_70843070	0.850254	HIF1A.p2	NM_001164082|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D
mm9_v1_chr15_-_53177711_53177759	0.849749	HIF1A.p2	AK132327|Ext1|14042|exostoses (multiple) 1	NM_010162|Ext1|14042|exostoses (multiple) 1
mm9_v1_chr11_-_43650152_43650304	0.847106	HIF1A.p2	Y12738|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr1_-_194956399_194956457	0.847079	HIF1A.p2	AK088756|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK147251|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK052355|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	NM_145415|Diexf|215193|digestive organ expansion factor homolog (zebrafish)
mm9_v1_chr10_+_79689342_79689484	0.846847	HIF1A.p2	AK158750|Mum1|68114|melanoma associated antigen (mutated) 1	NM_023431|Mum1|68114|melanoma associated antigen (mutated) 1	AK159972|Mum1|68114|melanoma associated antigen (mutated) 1	AK170459|Mum1|68114|melanoma associated antigen (mutated) 1	AK154610|Mum1|68114|melanoma associated antigen (mutated) 1
mm9_v1_chr5_+_35731765_35731765	0.846508	HIF1A.p2	AF009367|Hmx1|15371|H6 homeobox 1	NM_010445|Hmx1|15371|H6 homeobox 1
mm9_v1_chr6_-_39156609_39156661	0.846429	HIF1A.p2	AK136209|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145216|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145848|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr19_+_36908682_36908797	0.846412	HIF1A.p2	NM_001163635|Tnks2|74493|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm9_v1_chr2_+_80155622_80155622	0.845638	HIF1A.p2	AK016269|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_024181|Dnajc10|66861|DnaJ (Hsp40) homolog, subfamily C, member 10
mm9_v1_chr2_-_181194085_181194141	0.845105	HIF1A.p2	BC058179|Zbtb46|72147|zinc finger and BTB domain containing 46	AK155148|Zbtb46|72147|zinc finger and BTB domain containing 46	AK011461|Zbtb46|72147|zinc finger and BTB domain containing 46	AK085310|Zbtb46|72147|zinc finger and BTB domain containing 46	NM_028125|Zbtb46|72147|zinc finger and BTB domain containing 46
mm9_v1_chr11_-_70513555_70513642	0.844116	HIF1A.p2	BC115572|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	BC115573|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1	BC096427|Inca1|103844|inhibitor of CDK, cyclin A1 interacting protein 1
mm9_v1_chr14_-_21871400_21871464	0.841299	HIF1A.p2	AK004740|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	BC090983|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr1_-_174563092_174563154	0.840348	HIF1A.p2	AB183013|Dusp23|68440|dual specificity phosphatase 23	BC069187|Dusp23|68440|dual specificity phosphatase 23	NM_026725|Dusp23|68440|dual specificity phosphatase 23
mm9_v1_chr1_-_33871218_33871259	0.83981	HIF1A.p2	BC062154|Zfp451|98403|zinc finger protein 451
mm9_v1_chr13_-_100114593_100114662	0.838426	HIF1A.p2	BC016563|Ptcd2|68927|pentatricopeptide repeat domain 2	BC025110|Ptcd2|68927|pentatricopeptide repeat domain 2	NM_026873|Ptcd2|68927|pentatricopeptide repeat domain 2	AK004502|Ptcd2|68927|pentatricopeptide repeat domain 2	AK144396|Ptcd2|68927|pentatricopeptide repeat domain 2
mm9_v1_chr11_+_109224275_109224393	0.838242	HIF1A.p2	
mm9_v1_chr19_-_46423443_46423480	0.834635	HIF1A.p2	AK009611|2310034G01Rik|75579|RIKEN cDNA 2310034G01 gene	AK051784|2310034G01Rik|75579|RIKEN cDNA 2310034G01 gene
mm9_v1_chr10_+_111409750_111409849	0.834594	HIF1A.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr2_+_116946505_116946906	0.832163	HIF1A.p2	AK155070|Spred1|114715|sprouty protein with EVH-1 domain 1, related sequence	AK155065|Spred1|114715|sprouty protein with EVH-1 domain 1, related sequence
mm9_v1_chr6_+_106719113_106719221	0.831574	HIF1A.p2	AK135791|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK010662|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AB063106|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK152739|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	BC031764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	NM_027296|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK011764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK166804|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1	AK139764|Trnt1|70047|tRNA nucleotidyl transferase, CCA-adding, 1
mm9_v1_chr3_+_88968894_88969004	0.831171	HIF1A.p2	AF033564|Clk2|12748|CDC-like kinase 2
mm9_v1_chr6_-_72849854_72850037	0.829696	HIF1A.p2	NM_019715|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr14_+_27457610_27457865	0.827732	HIF1A.p2	AK013892|Arf4|11843|ADP-ribosylation factor 4	AK002302|Arf4|11843|ADP-ribosylation factor 4	AK168793|Arf4|11843|ADP-ribosylation factor 4	NM_007479|Arf4|11843|ADP-ribosylation factor 4	AK081686|Arf4|11843|ADP-ribosylation factor 4	AK153011|Arf4|11843|ADP-ribosylation factor 4	BC115650|Arf4|11843|ADP-ribosylation factor 4	BC115651|Arf4|11843|ADP-ribosylation factor 4	D87901|Arf4|11843|ADP-ribosylation factor 4
mm9_v1_chr15_-_97661807_97661936	0.822837	HIF1A.p2	AF207749|Hdac7|56233|histone deacetylase 7	AK040406|Hdac7|56233|histone deacetylase 7	AK150041|Hdac7|56233|histone deacetylase 7	AK036586|Hdac7|56233|histone deacetylase 7	AK044287|Hdac7|56233|histone deacetylase 7
mm9_v1_chr14_-_73725546_73725555	0.822813	HIF1A.p2	M26391|Rb1|19645|retinoblastoma 1
mm9_v1_chr5_+_28492235_28492251	0.821699	HIF1A.p2	AK157766|En2|13799|engrailed 2	NM_010134|En2|13799|engrailed 2
mm9_v1_chr18_+_58819093_58819192	0.819691	HIF1A.p2	AK165542|Isoc1|66307|isochorismatase domain containing 1	BC016576|Isoc1|66307|isochorismatase domain containing 1	AY035213|Isoc1|66307|isochorismatase domain containing 1	NM_025478|Isoc1|66307|isochorismatase domain containing 1	AK134794|Isoc1|66307|isochorismatase domain containing 1	AK152763|Isoc1|66307|isochorismatase domain containing 1	AK153257|Isoc1|66307|isochorismatase domain containing 1
mm9_v1_chrX_+_83437113_83437125	0.818984	HIF1A.p2	AK133411|Nr0b1|11614|nuclear receptor subfamily 0, group B, member 1	AK141239|Nr0b1|11614|nuclear receptor subfamily 0, group B, member 1	NM_007430|Nr0b1|11614|nuclear receptor subfamily 0, group B, member 1	U41568|Nr0b1|11614|nuclear receptor subfamily 0, group B, member 1
mm9_v1_chr13_-_31911790_31911820	0.817487	HIF1A.p2	
mm9_v1_chr4_-_136913576_136913662	0.81627	HIF1A.p2	U37720|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167195|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	BC064792|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167400|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168013|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168076|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168089|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168276|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169232|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK144216|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167609|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK003098|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK075567|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK145659|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK154870|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK166281|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK051543|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151726|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168820|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK150563|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168503|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169122|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169805|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151087|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK153564|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168758|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK159470|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	NM_009861|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr13_+_37918780_37918800	0.814634	HIF1A.p2	NM_001177868|Rreb1|68750|ras responsive element binding protein 1	AK047047|Rreb1|68750|ras responsive element binding protein 1	AK047251|Rreb1|68750|ras responsive element binding protein 1	AK171375|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr2_+_172825651_172825682	0.81439	HIF1A.p2	AK146058|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK156681|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK014325|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK035278|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr14_+_65977510_65977519	0.812663	HIF1A.p2	AK155538|Zfp395|380912|zinc finger protein 395	NM_199029|Zfp395|380912|zinc finger protein 395
mm9_v1_chr6_+_83059068_83059160	0.811245	HIF1A.p2	BC022162|Mrpl53|68499|mitochondrial ribosomal protein L53	AK003549|Mrpl53|68499|mitochondrial ribosomal protein L53	NM_026744|Mrpl53|68499|mitochondrial ribosomal protein L53
mm9_v1_chr6_-_116578909_116578956	0.811212	HIF1A.p2	AF281634|Zfp422|67255|zinc finger protein 422
mm9_v1_chr18_+_10325174_10325177	0.810506	HIF1A.p2	AK142556|Greb1l|381157|growth regulation by estrogen in breast cancer-like	NM_001083628|Greb1l|381157|growth regulation by estrogen in breast cancer-like
mm9_v1_chr11_+_114712845_114712854	0.809035	HIF1A.p2	NM_001110337|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C	NM_001110338|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C	AY079516|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C
mm9_v1_chr1_-_167932735_167932770	0.807697	HIF1A.p2	X68363|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68362|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489477|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489478|Pou2f1|18986|POU domain, class 2, transcription factor 1	BC066201|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68364|Pou2f1|18986|POU domain, class 2, transcription factor 1	AF508939|Pou2f1|18986|POU domain, class 2, transcription factor 1	AY177625|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK044830|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK028237|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_011137|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198932|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr8_-_72758275_72758364	0.807143	HIF1A.p2	BC048396|Armc6|76813|armadillo repeat containing 6	BC043070|Armc6|76813|armadillo repeat containing 6	BC055779|Armc6|76813|armadillo repeat containing 6	NM_133972|Armc6|76813|armadillo repeat containing 6	AK010815|Armc6|76813|armadillo repeat containing 6	AK081550|Armc6|76813|armadillo repeat containing 6
mm9_v1_chr6_-_49164469_49164732	0.806424	HIF1A.p2	AB046173|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	BC045138|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	BC049082|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK011797|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK088465|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK011689|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3
mm9_v1_chr13_+_55701256_55701508	0.805628	HIF1A.p2	BC055703|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK050684|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK146855|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK171600|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	BC027195|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	NM_146045|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	AK141739|B4galt7|218271|xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)
mm9_v1_chr7_-_107731579_107731643	0.804736	HIF1A.p2	AK077636|Mrpl48|52443|mitochondrial ribosomal protein L48	BC037190|Mrpl48|52443|mitochondrial ribosomal protein L48	AK019161|Mrpl48|52443|mitochondrial ribosomal protein L48	AK171917|Mrpl48|52443|mitochondrial ribosomal protein L48	NM_198831|Mrpl48|52443|mitochondrial ribosomal protein L48
mm9_v1_chr7_+_148748102_148748107	0.800012	HIF1A.p2	X14972|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr8_+_108583449_108583790	0.797817	HIF1A.p2	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr9_+_59387443_59387536	0.795628	HIF1A.p2	AK075911|Hexa|15211|hexosaminidase A	NM_010421|Hexa|15211|hexosaminidase A	AK168186|Hexa|15211|hexosaminidase A	AK159091|Hexa|15211|hexosaminidase A	U07631|Hexa|15211|hexosaminidase A	AK159814|Hexa|15211|hexosaminidase A	AK167013|Hexa|15211|hexosaminidase A	AK170903|Hexa|15211|hexosaminidase A	AK075895|Hexa|15211|hexosaminidase A	AK151960|Hexa|15211|hexosaminidase A	AK080777|Hexa|15211|hexosaminidase A	AK159890|Hexa|15211|hexosaminidase A	AK150444|Hexa|15211|hexosaminidase A	BC010755|Hexa|15211|hexosaminidase A	AK160112|Hexa|15211|hexosaminidase A	X64331|Hexa|15211|hexosaminidase A
mm9_v1_chr13_-_51196061_51196096	0.795314	HIF1A.p2	AK083743|9430083A17Rik|77428|RIKEN cDNA 9430083A17 gene	AK157883|9430083A17Rik|77428|RIKEN cDNA 9430083A17 gene	AK158202|9430083A17Rik|77428|RIKEN cDNA 9430083A17 gene
mm9_v1_chr9_+_39999952_39999979	0.79191	HIF1A.p2	BC049772|Zfp202|80902|zinc finger protein 202
mm9_v1_chr8_-_81032730_81032793	0.788895	HIF1A.p2	AF031568|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	BC089350|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	AK088213|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	AK041927|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	BC011441|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene
mm9_v1_chr14_-_73725576_73725603	0.788861	HIF1A.p2	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr9_+_70390659_70390695	0.787531	HIF1A.p2	AK017715|Sltm|66660|SAFB-like, transcription modulator	AF462146|Sltm|66660|SAFB-like, transcription modulator	NM_025690|Sltm|66660|SAFB-like, transcription modulator	BC139202|Sltm|66660|SAFB-like, transcription modulator	BC145577|Sltm|66660|SAFB-like, transcription modulator
mm9_v1_chr12_+_111685516_111685575	0.787529	HIF1A.p2	AK129042|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK161855|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr11_+_94491055_94491166	0.784625	HIF1A.p2	AK159374|Lrrc59|98238|leucine rich repeat containing 59	AK159552|Lrrc59|98238|leucine rich repeat containing 59	AK166576|Lrrc59|98238|leucine rich repeat containing 59	AK053450|Lrrc59|98238|leucine rich repeat containing 59	BC006877|Lrrc59|98238|leucine rich repeat containing 59	NM_133807|Lrrc59|98238|leucine rich repeat containing 59	AK169390|Lrrc59|98238|leucine rich repeat containing 59	BC066172|Lrrc59|98238|leucine rich repeat containing 59	AK167604|Lrrc59|98238|leucine rich repeat containing 59	AK169250|Lrrc59|98238|leucine rich repeat containing 59
mm9_v1_chr19_+_32670279_32670283	0.78354	HIF1A.p2	AK137675|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr5_-_52581615_52581700	0.782425	HIF1A.p2	BC144759|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AF017153|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15	AK167927|Dhx15|13204|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm9_v1_chr13_-_29045399_29045574	0.780267	HIF1A.p2	AK187111|Sox4|20677|SRY-box containing gene 4	BC060669|Sox4|20677|SRY-box containing gene 4	X70298|Sox4|20677|SRY-box containing gene 4	BC052736|Sox4|20677|SRY-box containing gene 4	NM_009238|Sox4|20677|SRY-box containing gene 4	AK053840|Sox4|20677|SRY-box containing gene 4	AK028989|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr7_+_54051432_54051635	0.780175	HIF1A.p2	NM_008186|Gtf2h1|14884|general transcription factor II H, polypeptide 1	AK005065|Gtf2h1|14884|general transcription factor II H, polypeptide 1	AK182163|Gtf2h1|14884|general transcription factor II H, polypeptide 1	AK185521|Gtf2h1|14884|general transcription factor II H, polypeptide 1
mm9_v1_chr2_+_90744878_90745017	0.779856	HIF1A.p2	BC025103|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	AK010998|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	NM_025991|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4	AK014373|Kbtbd4|67136|kelch repeat and BTB (POZ) domain containing 4
mm9_v1_chr17_+_64950988_64951003	0.777593	HIF1A.p2	NM_008549|Man2a1|17158|mannosidase 2, alpha 1	X61172|Man2a1|17158|mannosidase 2, alpha 1	BC138371|Man2a1|17158|mannosidase 2, alpha 1	BC138372|Man2a1|17158|mannosidase 2, alpha 1
mm9_v1_chr6_+_4551065_4551157	0.775852	HIF1A.p2	AB091829|Casd1|213819|CAS1 domain containing 1	NM_145398|Casd1|213819|CAS1 domain containing 1	BC125377|Casd1|213819|CAS1 domain containing 1	BC125379|Casd1|213819|CAS1 domain containing 1
mm9_v1_chr3_+_129581477_129581610	0.775437	HIF1A.p2	BC051117|Pla2g12a|66350|phospholipase A2, group XIIA	AK010011|Pla2g12a|66350|phospholipase A2, group XIIA	NM_023196|Pla2g12a|66350|phospholipase A2, group XIIA	AY007381|Pla2g12a|66350|phospholipase A2, group XIIA	AK010174|Pla2g12a|66350|phospholipase A2, group XIIA	BC026812|Pla2g12a|66350|phospholipase A2, group XIIA	AK003183|Pla2g12a|66350|phospholipase A2, group XIIA	AK012414|Pla2g12a|66350|phospholipase A2, group XIIA	AK163693|Pla2g12a|66350|phospholipase A2, group XIIA
mm9_v1_chr7_+_108496574_108496658	0.775223	HIF1A.p2	AK172210|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	NM_001040111|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK137455|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK140646|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm9_v1_chr1_+_158488917_158488917	0.774921	HIF1A.p2	NM_001136104|Abl2|11352|v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)	NM_009595|Abl2|11352|v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)
mm9_v1_chr3_+_102862151_102862295	0.774256	HIF1A.p2	X13664|Nras|18176|neuroblastoma ras oncogene	NM_010937|Nras|18176|neuroblastoma ras oncogene	AK011704|Nras|18176|neuroblastoma ras oncogene	AK165960|Nras|18176|neuroblastoma ras oncogene	AK150357|Nras|18176|neuroblastoma ras oncogene	BC058755|Nras|18176|neuroblastoma ras oncogene	BC014704|Nras|18176|neuroblastoma ras oncogene	BC051443|Nras|18176|neuroblastoma ras oncogene
mm9_v1_chr14_-_67627598_67627723	0.774029	HIF1A.p2	AK220143|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC049081|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK139950|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK004667|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC085237|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK018668|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK155040|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AY057069|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK013467|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK007920|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AF067395|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK168482|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK169391|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	NM_009761|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like
mm9_v1_chr2_-_114480618_114480699	0.773866	HIF1A.p2	AK006965|Atpbd4|66632|ATP binding domain 4	AK017595|Atpbd4|66632|ATP binding domain 4	AK145789|Atpbd4|66632|ATP binding domain 4	AK033888|Atpbd4|66632|ATP binding domain 4	AK088160|Atpbd4|66632|ATP binding domain 4	NM_025675|Atpbd4|66632|ATP binding domain 4	AK007021|Atpbd4|66632|ATP binding domain 4	BC022995|Atpbd4|66632|ATP binding domain 4	AK036021|Atpbd4|66632|ATP binding domain 4	AK082013|Atpbd4|66632|ATP binding domain 4
mm9_v1_chr13_-_31065909_31065982	0.773637	HIF1A.p2	BC048154|Exoc2|66482|exocyst complex component 2	BC049102|Exoc2|66482|exocyst complex component 2	NM_025588|Exoc2|66482|exocyst complex component 2	AK050068|Exoc2|66482|exocyst complex component 2	AK032766|Exoc2|66482|exocyst complex component 2	AK042744|Exoc2|66482|exocyst complex component 2
mm9_v1_chr13_-_38619746_38619798	0.773197	HIF1A.p2	AK224996|Txndc5|105245|thioredoxin domain containing 5	AK224981|Txndc5|105245|thioredoxin domain containing 5	AK225017|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr6_+_17587046_17587119	0.769317	HIF1A.p2	AK150587|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	BC082589|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	NM_007604|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK007550|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AY544984|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2	AK008204|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr6_+_38501333_38501546	0.762263	HIF1A.p2	AK046307|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK044839|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170848|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_001170849|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	NM_138680|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK155264|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056383|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056354|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	BC056970|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK166155|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK147889|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AF318301|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK038543|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK048581|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK053863|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)	AK134191|Luc7l2|192196|LUC7-like 2 (S. cerevisiae)
mm9_v1_chrX_+_136145155_136145229	0.761902	HIF1A.p2	AB041548|Rnf128|66889|ring finger protein 128	AK004847|Rnf128|66889|ring finger protein 128	AK018582|Rnf128|66889|ring finger protein 128	NM_023270|Rnf128|66889|ring finger protein 128	AK146266|Rnf128|66889|ring finger protein 128	AY112656|Rnf128|66889|ring finger protein 128	AK167031|Rnf128|66889|ring finger protein 128	BC010477|Rnf128|66889|ring finger protein 128	AK008312|Rnf128|66889|ring finger protein 128
mm9_v1_chr17_+_68046597_68046626	0.759585	HIF1A.p2	X07737|Lama1|16772|laminin, alpha 1	AK051116|Lama1|16772|laminin, alpha 1	NM_008480|Lama1|16772|laminin, alpha 1	J04064|Lama1|16772|laminin, alpha 1
mm9_v1_chr3_+_88968718_88968771	0.759265	HIF1A.p2	NM_001163432|Clk2|12748|CDC-like kinase 2	NM_007712|Clk2|12748|CDC-like kinase 2	AK148377|Clk2|12748|CDC-like kinase 2	BC015080|Clk2|12748|CDC-like kinase 2
mm9_v1_chr9_+_119250469_119250588	0.758238	HIF1A.p2	AK143187|Acaa1a|113868|acetyl-Coenzyme A acyltransferase 1A
mm9_v1_chr8_+_34763709_34763709	0.750447	HIF1A.p2	BC056357|Gsr|14782|glutathione reductase	BC057325|Gsr|14782|glutathione reductase	NM_010344|Gsr|14782|glutathione reductase
mm9_v1_chr5_-_23218477_23218493	0.750227	HIF1A.p2	AK089743|AI506816|433855|expressed sequence AI506816	AK157274|AI506816|433855|expressed sequence AI506816	AK161191|AI506816|433855|expressed sequence AI506816	AK088877|AI506816|433855|expressed sequence AI506816	AK151523|AI506816|433855|expressed sequence AI506816
mm9_v1_chr6_+_65728933_65728994	0.75002	HIF1A.p2	NM_027547|Prdm5|70779|PR domain containing 5	BC138901|Prdm5|70779|PR domain containing 5	BC138902|Prdm5|70779|PR domain containing 5
mm9_v1_chr5_-_67819037_67819037	0.748803	HIF1A.p2	NM_001164806|Bend4|666938|BEN domain containing 4
mm9_v1_chr15_-_31383379_31383491	0.748411	HIF1A.p2	BC048680|Ropn1l|252967|ropporin 1-like	AF305427|Ropn1l|252967|ropporin 1-like	BC060990|Ropn1l|252967|ropporin 1-like	NM_145852|Ropn1l|252967|ropporin 1-like	AK131675|Ropn1l|252967|ropporin 1-like
mm9_v1_chr8_-_98412302_98412339	0.747214	HIF1A.p2	BC089341|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK147953|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr5_+_139728268_139728480	0.747038	HIF1A.p2	NM_026269|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)	AK003551|Get4|67604|golgi to ER traffic protein 4 homolog (S. cerevisiae)
mm9_v1_chr2_+_172825687_172825696	0.746636	HIF1A.p2	BC059051|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK017746|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr5_-_34000478_34000532	0.744743	HIF1A.p2	BC094042|Tmem129|68366|transmembrane protein 129	NM_026698|Tmem129|68366|transmembrane protein 129	BC029088|Tmem129|68366|transmembrane protein 129	AK002836|Tmem129|68366|transmembrane protein 129
mm9_v1_chr17_+_80014532_80014624	0.742744	HIF1A.p2	BC024059|Fam82a1|381110|family with sequence similarity 82, member A1
mm9_v1_chr13_-_107812106_107812216	0.742337	HIF1A.p2	AK037037|Kif2a|16563|kinesin family member 2A	BC006803|Kif2a|16563|kinesin family member 2A	D12644|Kif2a|16563|kinesin family member 2A	NM_001145779|Kif2a|16563|kinesin family member 2A	NM_008442|Kif2a|16563|kinesin family member 2A
mm9_v1_chr3_+_16083164_16083288	0.741849	HIF1A.p2	NM_001145919|Ythdf3|229096|YTH domain family 3	NM_172677|Ythdf3|229096|YTH domain family 3	BC067040|Ythdf3|229096|YTH domain family 3	AK039176|Ythdf3|229096|YTH domain family 3	AK137245|Ythdf3|229096|YTH domain family 3	BC067042|Ythdf3|229096|YTH domain family 3	AK053736|Ythdf3|229096|YTH domain family 3	BC057158|Ythdf3|229096|YTH domain family 3
mm9_v1_chr10_-_68675679_68675845	0.741535	HIF1A.p2	AK084964|A930033H14Rik|320700|RIKEN cDNA A930033H14 gene	AK044689|A930033H14Rik|320700|RIKEN cDNA A930033H14 gene
mm9_v1_chr11_-_70051346_70051356	0.740186	HIF1A.p2	BC055357|0610010K14Rik|104457|RIKEN cDNA 0610010K14 gene
mm9_v1_chr15_-_89185832_89185990	0.739427	HIF1A.p2	AK184485|Lmf2|105847|lipase maturation factor 2	AK185616|Lmf2|105847|lipase maturation factor 2	AK084606|Lmf2|105847|lipase maturation factor 2	BC026448|Lmf2|105847|lipase maturation factor 2	BC079532|Lmf2|105847|lipase maturation factor 2
mm9_v1_chr11_+_101107691_101107706	0.738428	HIF1A.p2	BC036348|Vps25|28084|vacuolar protein sorting 25 (yeast)
mm9_v1_chr5_+_74489078_74489151	0.737889	HIF1A.p2	AK045300|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene	AK172090|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene	AK012278|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene	AK172703|2700023E23Rik|70036|RIKEN cDNA 2700023E23 gene
mm9_v1_chr5_-_106887184_106887184	0.737343	HIF1A.p2	AK053799|Barhl2|104382|BarH-like 2 (Drosophila)	NM_001005477|Barhl2|104382|BarH-like 2 (Drosophila)
mm9_v1_chr5_+_130231003_130231023	0.73531	HIF1A.p2	AK170336|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr15_-_51697020_51697034	0.734578	HIF1A.p2	AK146200|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167815|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK020033|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK088436|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167844|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168259|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168274|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	BC086915|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK160335|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168553|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK169416|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK168108|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H	AK167928|Eif3h|68135|eukaryotic translation initiation factor 3, subunit H
mm9_v1_chrX_-_72661900_72661926	0.734332	HIF1A.p2	AK142198|Mtcp1|17763|mature T-cell proliferation 1	AK140533|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr2_-_118199046_118199154	0.73208	HIF1A.p2	BC052037|Gpr176|381413|G protein-coupled receptor 176	NM_201367|Gpr176|381413|G protein-coupled receptor 176
mm9_v1_chr11_+_54679881_54679983	0.731425	HIF1A.p2	BC070415|Hint1|15254|histidine triad nucleotide binding protein 1	AK012433|Hint1|15254|histidine triad nucleotide binding protein 1	AK002965|Hint1|15254|histidine triad nucleotide binding protein 1	NM_008248|Hint1|15254|histidine triad nucleotide binding protein 1	BC080296|Hint1|15254|histidine triad nucleotide binding protein 1	U60001|Hint1|15254|histidine triad nucleotide binding protein 1
mm9_v1_chr8_+_37157863_37157905	0.730872	HIF1A.p2	NM_172911|D8Ertd82e|244418|DNA segment, Chr 8, ERATO Doi 82, expressed
mm9_v1_chr8_-_107165567_107165632	0.729615	HIF1A.p2	BC055880|Fam96b|68523|family with sequence similarity 96, member B	AK003830|Fam96b|68523|family with sequence similarity 96, member B	NM_026753|Fam96b|68523|family with sequence similarity 96, member B
mm9_v1_chr2_+_131088210_131088303	0.72944	HIF1A.p2	AK082821|Pank2|74450|pantothenate kinase 2	NM_153501|Pank2|74450|pantothenate kinase 2	AK159175|Pank2|74450|pantothenate kinase 2	AK154080|Pank2|74450|pantothenate kinase 2	BC106184|Pank2|74450|pantothenate kinase 2	AK154023|Pank2|74450|pantothenate kinase 2
mm9_v1_chr19_-_41922577_41922621	0.729379	HIF1A.p2	BC034214|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	BC085510|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	AK081171|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2	NM_177603|Frat2|212398|frequently rearranged in advanced T-cell lymphomas 2
mm9_v1_chr5_-_124637048_124637063	0.728489	HIF1A.p2	AK147486|Pitpnm2|19679|phosphatidylinositol transfer protein, membrane-associated 2
mm9_v1_chr5_-_39076043_39076064	0.726285	HIF1A.p2	NM_001081144|Zfp518b|100515|zinc finger protein 518B	NM_001177902|Zfp518b|100515|zinc finger protein 518B
mm9_v1_chr19_-_4615523_4615557	0.725382	HIF1A.p2	AK163603|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr17_+_83614611_83614641	0.71929	HIF1A.p2	NM_134117|Pkdcc|106522|protein kinase domain containing, cytoplasmic	AB381893|Pkdcc|106522|protein kinase domain containing, cytoplasmic	AB436780|Pkdcc|106522|protein kinase domain containing, cytoplasmic	BC086639|Pkdcc|106522|protein kinase domain containing, cytoplasmic
mm9_v1_chr8_-_122082340_122082342	0.717004	HIF1A.p2	AK002809|Mbtps1|56453|membrane-bound transcription factor peptidase, site 1
mm9_v1_chr14_-_27783615_27783757	0.71692	HIF1A.p2	AK030445|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK045438|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK088080|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AY113705|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK033566|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK146356|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	AK049307|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	NM_145221|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	BC063751|Appl1|72993|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm9_v1_chr8_-_124431245_124431547	0.71688	HIF1A.p2	AK148134|Slc7a5|20539|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5	AB023409|Slc7a5|20539|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5	AB017189|Slc7a5|20539|solute carrier family 7 (cationic amino acid transporter, y+ system), member 5
mm9_v1_chr2_-_25066706_25067008	0.716285	HIF1A.p2	AK087524|Cobra1|58202|cofactor of BRCA1	AK080419|Cobra1|58202|cofactor of BRCA1	AK214490|Cobra1|58202|cofactor of BRCA1	BC004762|Cobra1|58202|cofactor of BRCA1	AB041607|Cobra1|58202|cofactor of BRCA1	AK046129|Cobra1|58202|cofactor of BRCA1	NM_021393|Cobra1|58202|cofactor of BRCA1
mm9_v1_chr11_+_16652205_16652516	0.716062	HIF1A.p2	AK004883|Egfr|13649|epidermal growth factor receptor	NM_007912|Egfr|13649|epidermal growth factor receptor	NM_207655|Egfr|13649|epidermal growth factor receptor	AK004944|Egfr|13649|epidermal growth factor receptor	AK004911|Egfr|13649|epidermal growth factor receptor	AK134262|Egfr|13649|epidermal growth factor receptor	AK014017|Egfr|13649|epidermal growth factor receptor	BC023729|Egfr|13649|epidermal growth factor receptor	AF124513|Egfr|13649|epidermal growth factor receptor	AF275367|Egfr|13649|epidermal growth factor receptor	X59698|Egfr|13649|epidermal growth factor receptor	AK049452|Egfr|13649|epidermal growth factor receptor	X78987|Egfr|13649|epidermal growth factor receptor	U03425|Egfr|13649|epidermal growth factor receptor	L06864|Egfr|13649|epidermal growth factor receptor
mm9_v1_chr7_-_29096957_29097119	0.71537	HIF1A.p2	AK010832|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	BC010303|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AY551342|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK088074|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK012977|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	BC037056|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK008340|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK008382|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	NM_025616|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)	AK167473|Timm50|66525|translocase of inner mitochondrial membrane 50 homolog (yeast)
mm9_v1_chr5_+_38430461_38430564	0.714021	HIF1A.p2	AK007700|Stx18|71116|syntaxin 18	AK170165|Stx18|71116|syntaxin 18	NM_026959|Stx18|71116|syntaxin 18	BC021362|Stx18|71116|syntaxin 18	AK169273|Stx18|71116|syntaxin 18	AK016910|Stx18|71116|syntaxin 18
mm9_v1_chr13_-_12742377_12742693	0.713282	HIF1A.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK170650|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	BC093499|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AF154337|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK009736|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK170103|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK087190|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK171335|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK010724|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene
mm9_v1_chr11_+_80022587_80022605	0.712134	HIF1A.p2	AK169811|Rhot1|59040|ras homolog gene family, member T1	AK021245|Rhot1|59040|ras homolog gene family, member T1	AK019059|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr1_+_93437120_93437389	0.712033	HIF1A.p2	AK153774|Asb1|65247|ankyrin repeat and SOCS box-containing 1	NM_001039126|Asb1|65247|ankyrin repeat and SOCS box-containing 1	BC034869|Asb1|65247|ankyrin repeat and SOCS box-containing 1	AK122456|Asb1|65247|ankyrin repeat and SOCS box-containing 1	AF155352|Asb1|65247|ankyrin repeat and SOCS box-containing 1
mm9_v1_chr15_-_85412250_85412299	0.711795	HIF1A.p2	BC058398|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_009528|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr8_+_82163574_82163602	0.709892	HIF1A.p2	NM_001081164|Otud4|73945|OTU domain containing 4	BC138373|Otud4|73945|OTU domain containing 4	BC145259|Otud4|73945|OTU domain containing 4
mm9_v1_chr7_-_87547589_87547748	0.708085	HIF1A.p2	L26489|Furin|18550|furin (paired basic amino acid cleaving enzyme)	NM_011046|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr16_+_84835361_84835405	0.707995	HIF1A.p2	AY282793|Gabpa|14390|GA repeat binding protein, alpha	M74515|Gabpa|14390|GA repeat binding protein, alpha	BC052448|Gabpa|14390|GA repeat binding protein, alpha	NM_008065|Gabpa|14390|GA repeat binding protein, alpha
mm9_v1_chr14_+_121310342_121310481	0.707179	HIF1A.p2	AK161668|Ipo5|70572|importin 5	NM_023579|Ipo5|70572|importin 5	AK079134|Ipo5|70572|importin 5	AK049422|Ipo5|70572|importin 5	AK169664|Ipo5|70572|importin 5	AK053681|Ipo5|70572|importin 5	AK017701|Ipo5|70572|importin 5	AK167303|Ipo5|70572|importin 5	AF294327|Ipo5|70572|importin 5	BC052392|Ipo5|70572|importin 5
mm9_v1_chr11_-_79067893_79067979	0.706816	HIF1A.p2	AF033186|Wsb1|78889|WD repeat and SOCS box-containing 1	BC053391|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr17_+_26275630_26275910	0.705032	HIF1A.p2	NM_001159598|Axin1|12005|axin 1	NM_009733|Axin1|12005|axin 1	AF009011|Axin1|12005|axin 1	BC113171|Axin1|12005|axin 1	BC011544|Axin1|12005|axin 1
mm9_v1_chr1_-_14745828_14746072	0.702704	HIF1A.p2	AB221639|Msc|17681|musculin	AF108216|Msc|17681|musculin	BC103594|Msc|17681|musculin	BC103592|Msc|17681|musculin	BC103593|Msc|17681|musculin	BC103623|Msc|17681|musculin	AF087035|Msc|17681|musculin	NM_010827|Msc|17681|musculin	AK138917|Msc|17681|musculin
mm9_v1_chr18_+_60720384_60720467	0.701349	HIF1A.p2	AK167509|Rbm22|66810|RNA binding motif protein 22	AK018452|Rbm22|66810|RNA binding motif protein 22	AK166600|Rbm22|66810|RNA binding motif protein 22	AK045116|Rbm22|66810|RNA binding motif protein 22	AK165277|Rbm22|66810|RNA binding motif protein 22	AK150271|Rbm22|66810|RNA binding motif protein 22	AK151758|Rbm22|66810|RNA binding motif protein 22	AK152252|Rbm22|66810|RNA binding motif protein 22	BC042691|Rbm22|66810|RNA binding motif protein 22	AK168919|Rbm22|66810|RNA binding motif protein 22	NM_025776|Rbm22|66810|RNA binding motif protein 22	BC080205|Rbm22|66810|RNA binding motif protein 22
mm9_v1_chr19_+_41557168_41557205	0.698666	HIF1A.p2	AK077424|Lcor|212391|ligand dependent nuclear receptor corepressor	AB076079|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr8_-_112132522_112132608	0.694122	HIF1A.p2	AK013102|Dhodh|56749|dihydroorotate dehydrogenase	BC027829|Dhodh|56749|dihydroorotate dehydrogenase	BC045206|Dhodh|56749|dihydroorotate dehydrogenase	NM_020046|Dhodh|56749|dihydroorotate dehydrogenase
mm9_v1_chr2_-_163245205_163245247	0.693621	HIF1A.p2	BC005579|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	NM_025699|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK009708|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK014323|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK088622|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK153499|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene	AK006969|3230401D17Rik|66680|RIKEN cDNA 3230401D17 gene
mm9_v1_chr13_+_21271760_21271827	0.690994	HIF1A.p2	AK049314|Trim27|19720|tripartite motif-containing 27	NM_009054|Trim27|19720|tripartite motif-containing 27
mm9_v1_chr4_-_124370770_124370859	0.690104	HIF1A.p2	BC043139|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK012550|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	NM_026031|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK147113|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	BC061074|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK145266|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr2_+_144096752_144096785	0.689812	HIF1A.p2	AK031535|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	AK049565|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene	NM_028984|8430406I07Rik|74528|RIKEN cDNA 8430406I07 gene
mm9_v1_chr3_-_115710131_115710328	0.688033	HIF1A.p2	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr14_-_57676781_57676936	0.688026	HIF1A.p2	NM_016975|Gja3|14611|gap junction protein, alpha 3	BC138492|Gja3|14611|gap junction protein, alpha 3	BC138493|Gja3|14611|gap junction protein, alpha 3	AY390398|Gja3|14611|gap junction protein, alpha 3
mm9_v1_chr6_-_72849701_72849794	0.687861	HIF1A.p2	AK142436|Kcmf1|74287|potassium channel modulatory factor 1	BC043330|Kcmf1|74287|potassium channel modulatory factor 1	BC029325|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr10_-_33927262_33927356	0.685317	HIF1A.p2	AK045065|Dse|212898|dermatan sulfate epimerase	BC053095|Dse|212898|dermatan sulfate epimerase	NM_172508|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr7_+_73254341_73254400	0.684912	HIF1A.p2	AK129255|Chsy1|269941|chondroitin sulfate synthase 1	BC128567|Chsy1|269941|chondroitin sulfate synthase 1	BC153826|Chsy1|269941|chondroitin sulfate synthase 1	BC153827|Chsy1|269941|chondroitin sulfate synthase 1	NM_001081163|Chsy1|269941|chondroitin sulfate synthase 1
mm9_v1_chr8_+_109674517_109674597	0.684762	HIF1A.p2	BC054749|Cyb5b|66427|cytochrome b5 type B	BC062980|Cyb5b|66427|cytochrome b5 type B	AK003333|Cyb5b|66427|cytochrome b5 type B	AK088970|Cyb5b|66427|cytochrome b5 type B	AK165543|Cyb5b|66427|cytochrome b5 type B	AK052810|Cyb5b|66427|cytochrome b5 type B	NM_025558|Cyb5b|66427|cytochrome b5 type B	AK019263|Cyb5b|66427|cytochrome b5 type B	BC048147|Cyb5b|66427|cytochrome b5 type B	AK003815|Cyb5b|66427|cytochrome b5 type B	AK168422|Cyb5b|66427|cytochrome b5 type B	AK166544|Cyb5b|66427|cytochrome b5 type B	BC046810|Cyb5b|66427|cytochrome b5 type B	BC046479|Cyb5b|66427|cytochrome b5 type B	BC058812|Cyb5b|66427|cytochrome b5 type B
mm9_v1_chr13_-_106084846_106084897	0.683437	HIF1A.p2	AK013941|Rnf180|71816|ring finger protein 180
mm9_v1_chr14_-_73109722_73109912	0.6828	HIF1A.p2	AK089380|Fndc3a|319448|fibronectin type III domain containing 3A	AK032733|Fndc3a|319448|fibronectin type III domain containing 3A	AK164398|Fndc3a|319448|fibronectin type III domain containing 3A	AK048586|Fndc3a|319448|fibronectin type III domain containing 3A	DQ192036|Fndc3a|319448|fibronectin type III domain containing 3A	NM_207636|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr3_-_144233110_144233181	0.682067	HIF1A.p2	AK165112|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	AK088698|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1	NM_011828|Hs2st1|23908|heparan sulfate 2-O-sulfotransferase 1
mm9_v1_chr1_-_75502814_75502969	0.681903	HIF1A.p2	AK029863|Obsl1|98733|obscurin-like 1	AK162473|Obsl1|98733|obscurin-like 1	AK034852|Obsl1|98733|obscurin-like 1
mm9_v1_chr14_-_51544362_51544454	0.680518	HIF1A.p2	AK145181|Osgep|66246|O-sialoglycoprotein endopeptidase
mm9_v1_chr9_-_21092394_21092412	0.677805	HIF1A.p2	BC021438|Kri1|215194|KRI1 homolog (S. cerevisiae)	AK051997|Kri1|215194|KRI1 homolog (S. cerevisiae)	NM_145416|Kri1|215194|KRI1 homolog (S. cerevisiae)
mm9_v1_chr17_-_57170896_57170957	0.677048	HIF1A.p2	AK077415|Khsrp|16549|KH-type splicing regulatory protein	AK156541|Khsrp|16549|KH-type splicing regulatory protein	NM_010613|Khsrp|16549|KH-type splicing regulatory protein
mm9_v1_chr5_-_134790277_134790348	0.676239	HIF1A.p2	BC047387|Gtf2i|14886|general transcription factor II I
mm9_v1_chr10_+_61143056_61143106	0.675486	HIF1A.p2	AK157843|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	AK168175|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	AK159239|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	NM_009120|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	BC005549|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)	L20294|Sar1a|20224|SAR1 gene homolog A (S. cerevisiae)
mm9_v1_chr11_+_97524725_97524725	0.675207	HIF1A.p2	NM_139311|Mllt6|246198|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm9_v1_chr7_-_30033483_30033500	0.670682	HIF1A.p2	NM_028179|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene
mm9_v1_chr9_+_100544034_100544056	0.670066	HIF1A.p2	AK052003|Stag1|20842|stromal antigen 1	BC062954|Stag1|20842|stromal antigen 1	NM_009282|Stag1|20842|stromal antigen 1	AK017978|Stag1|20842|stromal antigen 1
mm9_v1_chr7_-_112630662_112630781	0.66564	HIF1A.p2	BC009660|Prkcdbp|109042|protein kinase C, delta binding protein	NM_028444|Prkcdbp|109042|protein kinase C, delta binding protein
mm9_v1_chr2_-_72817058_72817114	0.665321	HIF1A.p2	AK132702|Sp3|20687|trans-acting transcription factor 3
mm9_v1_chr5_+_130230969_130230987	0.664328	HIF1A.p2	AJ001261|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr2_-_25877064_25877129	0.664268	HIF1A.p2	AK157857|Ubac1|98766|ubiquitin associated domain containing 1
mm9_v1_chr8_-_89409079_89409204	0.66373	HIF1A.p2	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr8_+_86525604_86525604	0.663313	HIF1A.p2	BC147276|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC147277|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172025|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172026|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	NM_183097|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene
mm9_v1_chr14_+_76814750_76814782	0.661642	HIF1A.p2	AK173322|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr10_+_80392814_80392835	0.65617	HIF1A.p2	AK154952|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK010420|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	AK149895|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	BC023815|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	NM_008655|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta	X54149|Gadd45b|17873|growth arrest and DNA-damage-inducible 45 beta
mm9_v1_chr5_-_34000546_34000589	0.655706	HIF1A.p2	AK172044|Tmem129|68366|transmembrane protein 129
mm9_v1_chr8_-_129117310_129117573	0.655382	HIF1A.p2	NM_001164598|Irf2bp2|270110|interferon regulatory factor 2 binding protein 2
mm9_v1_chr4_-_12098960_12099006	0.655333	HIF1A.p2	BC055848|Fam92a|68099|family with sequence similarity 92, member A	AK013129|Fam92a|68099|family with sequence similarity 92, member A	AK019574|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr4_-_126645129_126645179	0.654673	HIF1A.p2	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chr2_+_127161893_127161939	0.65379	HIF1A.p2	AK088059|Dusp2|13537|dual specificity phosphatase 2	AK134067|Dusp2|13537|dual specificity phosphatase 2	NM_010090|Dusp2|13537|dual specificity phosphatase 2	BC048696|Dusp2|13537|dual specificity phosphatase 2	L11330|Dusp2|13537|dual specificity phosphatase 2
mm9_v1_chr9_-_115219520_115219538	0.653668	HIF1A.p2	BC052433|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	NM_024222|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr11_-_85048564_85048637	0.652504	HIF1A.p2	BC018442|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	BC019152|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK133853|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	NM_025825|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK004888|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm9_v1_chr13_-_53381426_53381516	0.651819	HIF1A.p2	AK084752|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	AK031112|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	AK083538|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	BC070436|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	NM_013846|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2	AK157705|Ror2|26564|receptor tyrosine kinase-like orphan receptor 2
mm9_v1_chr4_+_140857147_140857182	0.651282	HIF1A.p2	AK137704|Epha2|13836|Eph receptor A2	AK144202|Epha2|13836|Eph receptor A2	NM_010139|Epha2|13836|Eph receptor A2	U07634|Epha2|13836|Eph receptor A2	BC140960|Epha2|13836|Eph receptor A2	X78339|Epha2|13836|Eph receptor A2
mm9_v1_chr12_-_72237590_72237690	0.650046	HIF1A.p2	AK012712|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK171071|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AF150101|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC028435|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	BC024370|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK018764|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK165848|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024853|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_001024854|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	NM_013896|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)	AK172179|Timm9|30056|translocase of inner mitochondrial membrane 9 homolog (yeast)
mm9_v1_chr16_-_21947543_21947585	0.649804	HIF1A.p2	AK160292|Tmem41a|66664|transmembrane protein 41a	BC019770|Tmem41a|66664|transmembrane protein 41a
mm9_v1_chr5_-_20561610_20561764	0.649602	HIF1A.p2	X63440|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	BC051980|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	NM_011203|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12	AK154107|Ptpn12|19248|protein tyrosine phosphatase, non-receptor type 12
mm9_v1_chr11_-_84642465_84642548	0.648234	HIF1A.p2	BC022224|Dhrs11|192970|dehydrogenase/reductase (SDR family) member 11	AK157041|Dhrs11|192970|dehydrogenase/reductase (SDR family) member 11	NM_177564|Dhrs11|192970|dehydrogenase/reductase (SDR family) member 11
mm9_v1_chr14_-_20902310_20902393	0.647755	HIF1A.p2	BC027644|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK031748|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK007941|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	AK015650|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene	NM_026209|1810063B07Rik|67509|RIKEN cDNA 1810063B07 gene
mm9_v1_chr7_-_34918076_34918310	0.647638	HIF1A.p2	BC054125|Wtip|101543|WT1-interacting protein	NM_207212|Wtip|101543|WT1-interacting protein
mm9_v1_chr12_+_88488104_88488148	0.647422	HIF1A.p2	AB041613|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr4_-_109337891_109337976	0.644397	HIF1A.p2	AK003933|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	BC027026|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	NM_007671|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
mm9_v1_chr9_+_119250591_119250600	0.643053	HIF1A.p2	BC012400|Acaa1a|113868|acetyl-Coenzyme A acyltransferase 1A
mm9_v1_chr3_-_107434441_107434654	0.639653	HIF1A.p2	AK194900|Fam40a|229707|family with sequence similarity 40, member A	BC023952|Fam40a|229707|family with sequence similarity 40, member A	AK032065|Fam40a|229707|family with sequence similarity 40, member A	AK032642|Fam40a|229707|family with sequence similarity 40, member A	AK035833|Fam40a|229707|family with sequence similarity 40, member A	AK148011|Fam40a|229707|family with sequence similarity 40, member A	AK169644|Fam40a|229707|family with sequence similarity 40, member A	NM_153563|Fam40a|229707|family with sequence similarity 40, member A
mm9_v1_chr10_-_79896388_79896431	0.639254	HIF1A.p2	AK170674|Tcf3|21423|transcription factor 3	NM_001164147|Tcf3|21423|transcription factor 3	NM_001164148|Tcf3|21423|transcription factor 3	NM_001164149|Tcf3|21423|transcription factor 3	NM_001164150|Tcf3|21423|transcription factor 3	NM_001164151|Tcf3|21423|transcription factor 3	NM_001164152|Tcf3|21423|transcription factor 3	NM_001164153|Tcf3|21423|transcription factor 3	NM_011548|Tcf3|21423|transcription factor 3	AK147735|Tcf3|21423|transcription factor 3
mm9_v1_chr14_-_70842930_70842958	0.636184	HIF1A.p2	AK013165|Polr3d|67065|polymerase (RNA) III (DNA directed) polypeptide D
mm9_v1_chr1_+_40738476_40738556	0.635842	HIF1A.p2	BC103685|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC104737|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC105676|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	NM_001033289|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm9_v1_chr3_+_96405063_96405082	0.634054	HIF1A.p2	AK051276|Lix1l|280411|Lix1-like
mm9_v1_chr4_-_137352181_137352292	0.632255	HIF1A.p2	X13409|Alpl|11647|alkaline phosphatase, liver/bone/kidney	BC065175|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK167481|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK166732|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK076459|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK161780|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK167023|Alpl|11647|alkaline phosphatase, liver/bone/kidney	J02980|Alpl|11647|alkaline phosphatase, liver/bone/kidney	NM_007431|Alpl|11647|alkaline phosphatase, liver/bone/kidney	AK164002|Alpl|11647|alkaline phosphatase, liver/bone/kidney
mm9_v1_chr12_+_83717883_83718024	0.631956	HIF1A.p2	AK139323|Rgs6|50779|regulator of G-protein signaling 6	AK052527|Rgs6|50779|regulator of G-protein signaling 6	NM_015812|Rgs6|50779|regulator of G-protein signaling 6
mm9_v1_chr11_-_70468130_70468151	0.63132	HIF1A.p2	AK011066|Pfn1|18643|profilin 1	AK152491|Pfn1|18643|profilin 1	AK160191|Pfn1|18643|profilin 1	NM_011072|Pfn1|18643|profilin 1
mm9_v1_chr11_-_3166349_3166433	0.630296	HIF1A.p2	BC039649|Drg1|13494|developmentally regulated GTP binding protein 1	AK080814|Drg1|13494|developmentally regulated GTP binding protein 1	D10715|Drg1|13494|developmentally regulated GTP binding protein 1	NM_007879|Drg1|13494|developmentally regulated GTP binding protein 1	AK144438|Drg1|13494|developmentally regulated GTP binding protein 1	AK044194|Drg1|13494|developmentally regulated GTP binding protein 1	AK155061|Drg1|13494|developmentally regulated GTP binding protein 1	AK090156|Drg1|13494|developmentally regulated GTP binding protein 1
mm9_v1_chr13_-_56236756_56236903	0.626442	HIF1A.p2	AK143498|H2afy|26914|H2A histone family, member Y	AB071988|H2afy|26914|H2A histone family, member Y	BC006955|H2afy|26914|H2A histone family, member Y	AF171080|H2afy|26914|H2A histone family, member Y	AK039274|H2afy|26914|H2A histone family, member Y
mm9_v1_chr2_-_25877230_25877291	0.624237	HIF1A.p2	BC021811|Ubac1|98766|ubiquitin associated domain containing 1	NM_133835|Ubac1|98766|ubiquitin associated domain containing 1
mm9_v1_chr11_-_116713389_116713469	0.619746	HIF1A.p2	AF250132|Srsf2|20382|serine/arginine-rich splicing factor 2
mm9_v1_chr17_+_29627697_29627792	0.619518	HIF1A.p2	AK158445|Pim1|18712|proviral integration site 1	BC042885|Pim1|18712|proviral integration site 1
mm9_v1_chr3_+_137286635_137286835	0.617673	HIF1A.p2	AK018944|Ddit4l|73284|DNA-damage-inducible transcript 4-like	NM_030143|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK006617|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK053333|Ddit4l|73284|DNA-damage-inducible transcript 4-like	BC038131|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AF335325|Ddit4l|73284|DNA-damage-inducible transcript 4-like
mm9_v1_chr5_-_92738919_92738964	0.614619	HIF1A.p2	AK160646|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr1_-_157264398_157264577	0.612279	HIF1A.p2	AK147403|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC153872|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF114753|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC075721|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AK141660|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	NM_011273|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr6_+_29644178_29644255	0.609864	HIF1A.p2	AF276890|Tspan33|232670|tetraspanin 33	AK172176|Tspan33|232670|tetraspanin 33	AK004954|Tspan33|232670|tetraspanin 33	BC024685|Tspan33|232670|tetraspanin 33	NM_146173|Tspan33|232670|tetraspanin 33
mm9_v1_chr3_+_151873407_151873495	0.608488	HIF1A.p2	AK028418|Fubp1|51886|far upstream element (FUSE) binding protein 1	NM_057172|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK167730|Fubp1|51886|far upstream element (FUSE) binding protein 1	BC023780|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK032517|Fubp1|51886|far upstream element (FUSE) binding protein 1	BC014763|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK029458|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK079204|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK138011|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK166066|Fubp1|51886|far upstream element (FUSE) binding protein 1	AK160815|Fubp1|51886|far upstream element (FUSE) binding protein 1
mm9_v1_chr6_-_115626497_115626580	0.606327	HIF1A.p2	BC092040|Raf1|110157|v-raf-leukemia viral oncogene 1	BC015273|Raf1|110157|v-raf-leukemia viral oncogene 1	AK036317|Raf1|110157|v-raf-leukemia viral oncogene 1	BC056439|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr11_-_23397927_23397986	0.604491	HIF1A.p2	BC038397|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	BC052829|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK033696|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK093945|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	NM_172391|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK154196|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK155265|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK137116|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
mm9_v1_chr5_+_65928651_65928694	0.602705	HIF1A.p2	BC002013|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
mm9_v1_chr9_+_103207488_103207656	0.599456	HIF1A.p2	AK085031|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK129104|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084654|Topbp1|235559|topoisomerase (DNA) II binding protein 1	AK084869|Topbp1|235559|topoisomerase (DNA) II binding protein 1	BC049797|Topbp1|235559|topoisomerase (DNA) II binding protein 1	NM_176979|Topbp1|235559|topoisomerase (DNA) II binding protein 1
mm9_v1_chr11_-_103558971_103559046	0.598393	HIF1A.p2	AF007550|Gosr2|56494|golgi SNAP receptor complex member 2	BC051253|Gosr2|56494|golgi SNAP receptor complex member 2	AK005697|Gosr2|56494|golgi SNAP receptor complex member 2	AK002556|Gosr2|56494|golgi SNAP receptor complex member 2	BC008525|Gosr2|56494|golgi SNAP receptor complex member 2	AK013052|Gosr2|56494|golgi SNAP receptor complex member 2	AK150004|Gosr2|56494|golgi SNAP receptor complex member 2	NM_019650|Gosr2|56494|golgi SNAP receptor complex member 2
mm9_v1_chr4_+_101091913_101091947	0.597405	HIF1A.p2	NM_001177605|Ak4|11639|adenylate kinase 4	AK154374|Ak4|11639|adenylate kinase 4	NM_001177604|Ak4|11639|adenylate kinase 4
mm9_v1_chr8_-_75016484_75016582	0.597404	HIF1A.p2	NM_177766|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr11_+_85646116_85646116	0.596208	HIF1A.p2	NM_009324|Tbx2|21385|T-box 2
mm9_v1_chrX_+_165233030_165233030	0.595851	HIF1A.p2	AK164501|Arhgap6|11856|Rho GTPase activating protein 6	AK171677|Arhgap6|11856|Rho GTPase activating protein 6	NM_009707|Arhgap6|11856|Rho GTPase activating protein 6
mm9_v1_chr2_+_167906462_167906503	0.595443	HIF1A.p2	NM_021409|Pard6b|58220|par-6 (partitioning defective 6) homolog beta (C. elegans)
mm9_v1_chr6_+_54545104_54545338	0.594763	HIF1A.p2	AK078040|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	NM_001164361|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8	AK170592|Plekha8|231999|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm9_v1_chr12_+_79849894_79849915	0.592981	HIF1A.p2	AK133187|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC067404|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr12_+_56699903_56699903	0.589312	HIF1A.p2	NM_020287|Insm2|56856|insulinoma-associated 2
mm9_v1_chr6_-_134516930_134517009	0.588048	HIF1A.p2	BC060704|Lrp6|16974|low density lipoprotein receptor-related protein 6	NM_008514|Lrp6|16974|low density lipoprotein receptor-related protein 6
mm9_v1_chr11_+_75161934_75162104	0.58748	HIF1A.p2	NM_001102611|Smyd4|319822|SET and MYND domain containing 4	AK166057|Smyd4|319822|SET and MYND domain containing 4	AK089959|Smyd4|319822|SET and MYND domain containing 4	AK141484|Smyd4|319822|SET and MYND domain containing 4	BC095952|Smyd4|319822|SET and MYND domain containing 4	BC049810|Smyd4|319822|SET and MYND domain containing 4	AK030380|Smyd4|319822|SET and MYND domain containing 4	AK154507|Smyd4|319822|SET and MYND domain containing 4
mm9_v1_chr8_-_8660610_8660772	0.583895	HIF1A.p2	U30244|Efnb2|13642|ephrin B2	CT010381|Efnb2|13642|ephrin B2	U16819|Efnb2|13642|ephrin B2	L38847|Efnb2|13642|ephrin B2	NM_010111|Efnb2|13642|ephrin B2
mm9_v1_chr7_-_31741956_31742036	0.583464	HIF1A.p2	AK158906|Usf2|22282|upstream transcription factor 2
mm9_v1_chr11_+_57615080_57615164	0.582977	HIF1A.p2	BC051686|Sap30l|50724|SAP30-like	NM_001081168|Sap30l|50724|SAP30-like	BC094930|Sap30l|50724|SAP30-like
mm9_v1_chr8_+_87583954_87584056	0.581364	HIF1A.p2	AK156709|Fbxw9|68628|F-box and WD-40 domain protein 9	NM_026791|Fbxw9|68628|F-box and WD-40 domain protein 9	BC043658|Fbxw9|68628|F-box and WD-40 domain protein 9
mm9_v1_chr7_+_135667279_135667363	0.581177	HIF1A.p2	AK007414|Bag3|29810|BCL2-associated athanogene 3	AK036675|Bag3|29810|BCL2-associated athanogene 3	AK016510|Bag3|29810|BCL2-associated athanogene 3	AF130471|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr1_-_74998224_74998295	0.577691	HIF1A.p2	BC046984|Ihh|16147|Indian hedgehog	NM_010544|Ihh|16147|Indian hedgehog	AK144322|Ihh|16147|Indian hedgehog
mm9_v1_chr18_+_77168765_77168895	0.57738	HIF1A.p2	NM_025409|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK004281|Ier3ip1|66191|immediate early response 3 interacting protein 1	BC021512|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007388|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK007862|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK009116|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK182132|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK190140|Ier3ip1|66191|immediate early response 3 interacting protein 1	AK210106|Ier3ip1|66191|immediate early response 3 interacting protein 1
mm9_v1_chr17_+_80014390_80014404	0.57398	HIF1A.p2	AK139382|Fam82a1|381110|family with sequence similarity 82, member A1
mm9_v1_chr10_-_79896330_79896385	0.572271	HIF1A.p2	BC006860|Tcf3|21423|transcription factor 3	AK017617|Tcf3|21423|transcription factor 3	AK156265|Tcf3|21423|transcription factor 3	AK034777|Tcf3|21423|transcription factor 3	AK161009|Tcf3|21423|transcription factor 3	AK038738|Tcf3|21423|transcription factor 3
mm9_v1_chr5_+_148000271_148000302	0.570319	HIF1A.p2	NM_008178|Gsx1|14842|GS homeobox 1	U21224|Gsx1|14842|GS homeobox 1	BC137769|Gsx1|14842|GS homeobox 1
mm9_v1_chr10_+_42398721_42398783	0.569602	HIF1A.p2	AK044897|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AF533890|Ostm1|14628|osteopetrosis associated transmembrane protein 1	NM_172416|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK004546|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK050513|Ostm1|14628|osteopetrosis associated transmembrane protein 1	AK053664|Ostm1|14628|osteopetrosis associated transmembrane protein 1	BC057635|Ostm1|14628|osteopetrosis associated transmembrane protein 1
mm9_v1_chr16_+_84835573_84835671	0.568763	HIF1A.p2	AK148087|Gabpa|14390|GA repeat binding protein, alpha	AK145838|Gabpa|14390|GA repeat binding protein, alpha
mm9_v1_chr15_+_75771484_75771517	0.567493	HIF1A.p2	AK019163|Zfp623|78834|zinc finger protein 623	BC086767|Zfp623|78834|zinc finger protein 623
mm9_v1_chr15_-_76180500_76180651	0.566588	HIF1A.p2	AK178398|Sharpin|106025|SHANK-associated RH domain interacting protein
mm9_v1_chr16_-_18876593_18876775	0.566231	HIF1A.p2	BC028436|Mrpl40|18100|mitochondrial ribosomal protein L40	AK145885|Mrpl40|18100|mitochondrial ribosomal protein L40	AF034092|Mrpl40|18100|mitochondrial ribosomal protein L40	NM_010922|Mrpl40|18100|mitochondrial ribosomal protein L40
mm9_v1_chr12_-_86113816_86113911	0.56613	HIF1A.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr1_+_59969845_59969868	0.565154	HIF1A.p2	AK154812|Fam117b|72750|family with sequence similarity 117, member B	NM_001037725|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chr8_-_81032795_81032797	0.562454	HIF1A.p2	AK149658|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene	AK149764|Rbmxrt|19656|RNA binding motif protein, X chromosome retrogene
mm9_v1_chr9_+_64988960_64989018	0.559756	HIF1A.p2	AK011916|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	AF026465|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	AK051027|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	NM_008988|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	BC086481|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3	BC053057|Igdcc3|19289|immunoglobulin superfamily, DCC subclass, member 3
mm9_v1_chr16_+_13780778_13780842	0.557575	HIF1A.p2	NM_001039521|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK021410|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK165676|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK080680|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	BC138774|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	BC138776|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)	AK080397|Rrn3|106298|RRN3 RNA polymerase I transcription factor homolog (yeast)
mm9_v1_chr13_-_94269762_94269770	0.556663	HIF1A.p2	AK141957|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr19_+_60887452_60887529	0.555986	HIF1A.p2	NM_001167829|Fam45a|67894|family with sequence similarity 45, member A	NM_026437|Fam45a|67894|family with sequence similarity 45, member A	AK004643|Fam45a|67894|family with sequence similarity 45, member A	AK168474|Fam45a|67894|family with sequence similarity 45, member A	AK171767|Fam45a|67894|family with sequence similarity 45, member A	AK145769|Fam45a|67894|family with sequence similarity 45, member A	AK007867|Fam45a|67894|family with sequence similarity 45, member A	BC013514|Fam45a|67894|family with sequence similarity 45, member A	AK202624|Fam45a|67894|family with sequence similarity 45, member A
mm9_v1_chr7_+_86956134_86956146	0.555954	HIF1A.p2	AK146740|Mesp2|17293|mesoderm posterior 2
mm9_v1_chr6_-_91423388_91423454	0.555396	HIF1A.p2	AK010479|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	BC019405|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4	NM_133928|Chchd4|72170|coiled-coil-helix-coiled-coil-helix domain containing 4
mm9_v1_chr11_-_69734574_69734597	0.554948	HIF1A.p2	NM_001166596|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr4_+_151382993_151383061	0.554921	HIF1A.p2	AK154493|Klhl21|242785|kelch-like 21 (Drosophila)	NM_001033352|Klhl21|242785|kelch-like 21 (Drosophila)	BC060201|Klhl21|242785|kelch-like 21 (Drosophila)	AK052203|Klhl21|242785|kelch-like 21 (Drosophila)	AK158141|Klhl21|242785|kelch-like 21 (Drosophila)	BC141158|Klhl21|242785|kelch-like 21 (Drosophila)	BC141159|Klhl21|242785|kelch-like 21 (Drosophila)
mm9_v1_chr3_+_96439769_96439769	0.554514	HIF1A.p2	NM_001162388|Pex11b|18632|peroxisomal biogenesis factor 11 beta
mm9_v1_chr15_+_81416643_81416789	0.554424	HIF1A.p2	NM_177821|Ep300|328572|E1A binding protein p300	AK042627|Ep300|328572|E1A binding protein p300	BC144976|Ep300|328572|E1A binding protein p300	BC150681|Ep300|328572|E1A binding protein p300
mm9_v1_chr16_-_91931806_91931895	0.554158	HIF1A.p2	AK169318|Atp5o|28080|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC012241|Atp5o|28080|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK168292|Atp5o|28080|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK005309|Atp5o|28080|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_138597|Atp5o|28080|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
mm9_v1_chr10_+_80217947_80217975	0.553902	HIF1A.p2	AK035144|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	AY196089|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_199322|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	AY376663|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm9_v1_chr9_+_114597854_114597998	0.553624	HIF1A.p2	AK082950|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	AK159702|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	BC023347|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1	NM_146229|Dync1li1|235661|dynein cytoplasmic 1 light intermediate chain 1
mm9_v1_chr18_+_6765174_6765262	0.552047	HIF1A.p2	AK154920|Rab18|19330|RAB18, member RAS oncogene family	AK143673|Rab18|19330|RAB18, member RAS oncogene family	AK140901|Rab18|19330|RAB18, member RAS oncogene family	AK045514|Rab18|19330|RAB18, member RAS oncogene family	NM_181070|Rab18|19330|RAB18, member RAS oncogene family	BC056351|Rab18|19330|RAB18, member RAS oncogene family	AK146177|Rab18|19330|RAB18, member RAS oncogene family	AK146397|Rab18|19330|RAB18, member RAS oncogene family	L04966|Rab18|19330|RAB18, member RAS oncogene family	AB232612|Rab18|19330|RAB18, member RAS oncogene family	M79308|Rab18|19330|RAB18, member RAS oncogene family	X80333|Rab18|19330|RAB18, member RAS oncogene family
mm9_v1_chr6_+_116288396_116288456	0.549762	HIF1A.p2	AK005032|March8|71779|membrane-associated ring finger (C3HC4) 8	AK182250|March8|71779|membrane-associated ring finger (C3HC4) 8	AK189694|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr18_-_24762299_24762341	0.549075	HIF1A.p2	NM_139143|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr15_+_98957150_98957201	0.548993	HIF1A.p2	AK159335|Spats2|72572|spermatogenesis associated, serine-rich 2
mm9_v1_chr17_+_6270474_6270474	0.547431	HIF1A.p2	AK154554|Tmem181a|77106|transmembrane protein 181A	NM_001033178|Tmem181a|77106|transmembrane protein 181A
mm9_v1_chr11_-_69734369_69734464	0.547391	HIF1A.p2	AY129328|Eif5a|276770|eukaryotic translation initiation factor 5A	AY129329|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166592|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166594|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr8_+_9977802_9977903	0.54644	HIF1A.p2	AK044407|Abhd13|68904|abhydrolase domain containing 13	BC043690|Abhd13|68904|abhydrolase domain containing 13
mm9_v1_chr11_+_68884268_68884388	0.545455	HIF1A.p2	NM_025838|Tmem107|66910|transmembrane protein 107	NM_028336|Tmem107|66910|transmembrane protein 107	AK012938|Tmem107|66910|transmembrane protein 107	AK154279|Tmem107|66910|transmembrane protein 107	AK003403|Tmem107|66910|transmembrane protein 107	AK002804|Tmem107|66910|transmembrane protein 107	BC096686|Tmem107|66910|transmembrane protein 107	BC137584|Tmem107|66910|transmembrane protein 107	BC120499|Tmem107|66910|transmembrane protein 107
mm9_v1_chr11_-_119216770_119216851	0.54256	HIF1A.p2	AK141266|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AF153827|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AF304053|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AF304054|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	BC130268|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK034220|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK052266|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK128926|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	NM_018822|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)	AK076267|Sgsh|27029|N-sulfoglucosamine sulfohydrolase (sulfamidase)
mm9_v1_chr19_-_5560556_5560645	0.542411	HIF1A.p2	AF134805|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK028577|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK132478|Ovol1|18426|OVO homolog-like 1 (Drosophila)	NM_019935|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AF134804|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK003801|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK132505|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK132506|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK144952|Ovol1|18426|OVO homolog-like 1 (Drosophila)	BC021411|Ovol1|18426|OVO homolog-like 1 (Drosophila)
mm9_v1_chr10_-_80261226_80261370	0.540174	HIF1A.p2	AK088567|Plekhj1|78670|pleckstrin homology domain containing, family J member 1	NM_023900|Plekhj1|78670|pleckstrin homology domain containing, family J member 1
mm9_v1_chr5_+_130231000_130231002	0.539652	HIF1A.p2	BC055893|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr5_+_141717417_141717443	0.539589	HIF1A.p2	AK147578|Sdk1|330222|sidekick homolog 1 (chicken)
mm9_v1_chr2_-_44965866_44965983	0.538761	HIF1A.p2	AK122312|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535781|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535783|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr14_+_47504276_47504358	0.537601	HIF1A.p2	AK034323|Samd4|74480|sterile alpha motif domain containing 4
mm9_v1_chr18_+_60685819_60685850	0.532635	HIF1A.p2	AK016059|Dctn4|67665|dynactin 4	AK034292|Dctn4|67665|dynactin 4
mm9_v1_chr6_+_54766562_54766917	0.531323	HIF1A.p2	AF513708|Znrf2|387524|zinc and ring finger 2	NM_199143|Znrf2|387524|zinc and ring finger 2	BC104316|Znrf2|387524|zinc and ring finger 2	BC104317|Znrf2|387524|zinc and ring finger 2	BC125242|Znrf2|387524|zinc and ring finger 2
mm9_v1_chr4_-_137923869_137923874	0.526911	HIF1A.p2	BC050114|Cda|72269|cytidine deaminase	NM_028176|Cda|72269|cytidine deaminase	AK008793|Cda|72269|cytidine deaminase
mm9_v1_chr7_+_134913327_134913502	0.525238	HIF1A.p2	AK136955|Orai3|269999|ORAI calcium release-activated calcium modulator 3	NM_198424|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AK037138|Orai3|269999|ORAI calcium release-activated calcium modulator 3	BC061259|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AB271216|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AM712358|Orai3|269999|ORAI calcium release-activated calcium modulator 3
mm9_v1_chr17_+_46339730_46339822	0.524503	HIF1A.p2	BC092371|Xpo5|72322|exportin 5	BC055455|Xpo5|72322|exportin 5	AK010389|Xpo5|72322|exportin 5	AF343581|Xpo5|72322|exportin 5	NM_028198|Xpo5|72322|exportin 5	BC131660|Xpo5|72322|exportin 5	BC131661|Xpo5|72322|exportin 5
mm9_v1_chr2_+_121239744_121239768	0.522768	HIF1A.p2	BC033439|Pdia3|14827|protein disulfide isomerase associated 3
mm9_v1_chr3_-_90193813_90193859	0.51902	HIF1A.p2	BC141134|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AK135190|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AJ577573|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	NM_011988|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	BC060052|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3
mm9_v1_chr11_-_115992196_115992441	0.519018	HIF1A.p2	BC118954|Trim65|338364|tripartite motif-containing 65	BC118955|Trim65|338364|tripartite motif-containing 65	AK028857|Trim65|338364|tripartite motif-containing 65	BC057094|Trim65|338364|tripartite motif-containing 65	AK050080|Trim65|338364|tripartite motif-containing 65	AK047439|Trim65|338364|tripartite motif-containing 65	AK079982|Trim65|338364|tripartite motif-containing 65	NM_178802|Trim65|338364|tripartite motif-containing 65
mm9_v1_chr1_+_135260407_135260421	0.516897	HIF1A.p2	AK077179|Etnk2|214253|ethanolamine kinase 2
mm9_v1_chr2_+_6243767_6243980	0.516106	HIF1A.p2	AK155073|Usp6nl|98910|USP6 N-terminal like	NM_001080548|Usp6nl|98910|USP6 N-terminal like	AK129037|Usp6nl|98910|USP6 N-terminal like	AK084045|Usp6nl|98910|USP6 N-terminal like
mm9_v1_chr2_+_16277963_16277989	0.515179	HIF1A.p2	AK019482|Plxdc2|67448|plexin domain containing 2	AK154921|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr16_-_94592586_94592621	0.514255	HIF1A.p2	AF216309|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC038252|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159617|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_019543|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr17_+_57201623_57201743	0.512425	HIF1A.p2	AK077528|Crb3|224912|crumbs homolog 3 (Drosophila)	AK167279|Crb3|224912|crumbs homolog 3 (Drosophila)	BC024462|Crb3|224912|crumbs homolog 3 (Drosophila)	NM_177638|Crb3|224912|crumbs homolog 3 (Drosophila)
mm9_v1_chr11_+_119216870_119216901	0.512177	HIF1A.p2	AF345196|Slc26a11|268512|solute carrier family 26, member 11	NM_178743|Slc26a11|268512|solute carrier family 26, member 11	AK089182|Slc26a11|268512|solute carrier family 26, member 11	AK078545|Slc26a11|268512|solute carrier family 26, member 11	BC038604|Slc26a11|268512|solute carrier family 26, member 11
mm9_v1_chr12_+_79849918_79849954	0.512043	HIF1A.p2	NM_019579|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr10_+_85484631_85484753	0.511594	HIF1A.p2	AK165455|Fbxo7|69754|F-box protein 7	NM_153195|Fbxo7|69754|F-box protein 7	AK150626|Fbxo7|69754|F-box protein 7	AK151025|Fbxo7|69754|F-box protein 7	AK152513|Fbxo7|69754|F-box protein 7	AK147797|Fbxo7|69754|F-box protein 7	BC032153|Fbxo7|69754|F-box protein 7
mm9_v1_chr5_+_65928483_65928591	0.511349	HIF1A.p2	AK139564|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_016786|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK048194|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK035371|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK018366|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK160728|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK031055|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK036068|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK162142|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB011081|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC085311|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK166647|Ube2k|53323|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
mm9_v1_chr16_-_21947587_21947627	0.509843	HIF1A.p2	AK013518|Tmem41a|66664|transmembrane protein 41a	BC011512|Tmem41a|66664|transmembrane protein 41a	AK007685|Tmem41a|66664|transmembrane protein 41a	NM_025693|Tmem41a|66664|transmembrane protein 41a
mm9_v1_chr3_-_106350628_106350700	0.506562	HIF1A.p2	BC021753|Cept1|99712|choline/ethanolaminephosphotransferase 1	BC023783|Cept1|99712|choline/ethanolaminephosphotransferase 1	AK037116|Cept1|99712|choline/ethanolaminephosphotransferase 1	NM_133869|Cept1|99712|choline/ethanolaminephosphotransferase 1
mm9_v1_chr11_+_95685772_95685902	0.505545	HIF1A.p2	AJ457190|Phospho1|237928|phosphatase, orphan 1	NM_153104|Phospho1|237928|phosphatase, orphan 1
mm9_v1_chr11_+_57458925_57459050	0.504243	HIF1A.p2	AK162424|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	NM_134189|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK143714|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK159362|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK159088|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	BC060617|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK131155|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	AK172609|Galnt10|171212|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10
mm9_v1_chr1_-_90174043_90174209	0.503787	HIF1A.p2	AB162219|Hjurp|381280|Holliday junction recognition protein	AK138428|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	BC100379|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	AK133997|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	BC057309|Hjurp|381280|Holliday junction recognition protein	BC131919|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	AK042589|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	AK137562|6430706D22Rik|78605|RIKEN cDNA 6430706D22 gene	NM_172505|A730008H23Rik|212427|RIKEN cDNA A730008H23 gene	BC004768|Hjurp|381280|Holliday junction recognition protein	NM_198652|Hjurp|381280|Holliday junction recognition protein
mm9_v1_chr3_+_138106073_138106138	0.502875	HIF1A.p2	AK041792|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK159803|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	M84147|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK146949|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK076507|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	NM_007410|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	BC062879|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	AK002790|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide	BC090978|Adh5|11532|alcohol dehydrogenase 5 (class III), chi polypeptide
mm9_v1_chr3_+_106350764_106350811	0.502796	HIF1A.p2	AK009940|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK052824|Dram2|67171|VDNA-damage regulated autophagy modulator 2	BC024458|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK008532|Dram2|67171|VDNA-damage regulated autophagy modulator 2	AK012044|Dram2|67171|VDNA-damage regulated autophagy modulator 2
mm9_v1_chr8_+_32297803_32297858	0.501671	HIF1A.p2	BC062113|Fut10|171167|fucosyltransferase 10	NM_134161|Fut10|171167|fucosyltransferase 10	BC030474|Fut10|171167|fucosyltransferase 10	AK083041|Fut10|171167|fucosyltransferase 10	AK147136|Fut10|171167|fucosyltransferase 10	NM_001012517|Fut10|171167|fucosyltransferase 10	AK169153|Fut10|171167|fucosyltransferase 10
mm9_v1_chr13_-_56236910_56236913	0.501286	HIF1A.p2	NM_001159513|H2afy|26914|H2A histone family, member Y	NM_001159514|H2afy|26914|H2A histone family, member Y	NM_001159515|H2afy|26914|H2A histone family, member Y	NM_012015|H2afy|26914|H2A histone family, member Y
mm9_v1_chr5_-_149211354_149211479	0.50085	HIF1A.p2	BC068234|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK147991|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	M26687|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK139342|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	NM_007513|Slc7a1|11987|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm9_v1_chr5_-_137774729_137774738	0.499311	HIF1A.p2	BC046982|Slc12a9|83704|solute carrier family 12 (potassium/chloride transporters), member 9
mm9_v1_chr11_+_121007456_121007490	0.497116	HIF1A.p2	AF285590|Tex19.1|73679|testis expressed gene 19.1	NM_028602|Tex19.1|73679|testis expressed gene 19.1	AK010735|Tex19.1|73679|testis expressed gene 19.1	BC053492|Tex19.1|73679|testis expressed gene 19.1
mm9_v1_chr7_+_127245860_127245969	0.496234	HIF1A.p2	AK080630|Tmem159|233806|transmembrane protein 159	AK078811|Tmem159|233806|transmembrane protein 159	AK167192|Tmem159|233806|transmembrane protein 159	AK142240|Tmem159|233806|transmembrane protein 159	AK150434|Tmem159|233806|transmembrane protein 159	AK087074|Tmem159|233806|transmembrane protein 159	AK158048|Tmem159|233806|transmembrane protein 159	AK158249|Tmem159|233806|transmembrane protein 159	AK158250|Tmem159|233806|transmembrane protein 159	BC006689|Tmem159|233806|transmembrane protein 159	NM_145586|Tmem159|233806|transmembrane protein 159	AK171378|Tmem159|233806|transmembrane protein 159
mm9_v1_chr11_+_68505616_68505655	0.494097	HIF1A.p2	AK045066|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	AK045074|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	BC089011|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr2_+_103810274_103810481	0.493352	HIF1A.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chr1_+_122017763_122017771	0.492348	HIF1A.p2	AK014026|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene	NM_001172074|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene	NM_028439|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene	BC028767|3110009E18Rik|73103|RIKEN cDNA 3110009E18 gene
mm9_v1_chr11_-_117641895_117641934	0.481027	HIF1A.p2	AY236497|Tmc6|217353|transmembrane channel-like gene family 6	AY263158|Tmc6|217353|transmembrane channel-like gene family 6	BC004840|Tmc6|217353|transmembrane channel-like gene family 6	BC058195|Tmc6|217353|transmembrane channel-like gene family 6	AK052814|Tmc6|217353|transmembrane channel-like gene family 6	NM_181321|Tmc6|217353|transmembrane channel-like gene family 6
mm9_v1_chr5_+_130698192_130698294	0.478312	HIF1A.p2	AK142176|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171152|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK002297|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171607|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	BC033455|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene
mm9_v1_chr11_+_100948587_100948649	0.476702	HIF1A.p2	NM_001159384|Mlx|21428|MAX-like protein X	NM_001159385|Mlx|21428|MAX-like protein X	NM_011550|Mlx|21428|MAX-like protein X	AK011478|Mlx|21428|MAX-like protein X	BC031380|Mlx|21428|MAX-like protein X	U43607|Mlx|21428|MAX-like protein X	BC038004|Mlx|21428|MAX-like protein X	AK142605|Mlx|21428|MAX-like protein X	AF213670|Mlx|21428|MAX-like protein X	AF213671|Mlx|21428|MAX-like protein X	AF213672|Mlx|21428|MAX-like protein X	U43548|Mlx|21428|MAX-like protein X	AK177451|Mlx|21428|MAX-like protein X
mm9_v1_chr7_-_36181628_36181850	0.476197	HIF1A.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr16_+_24393435_24393655	0.4761	HIF1A.p2	NM_178665|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK168431|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK085626|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051345|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045288|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045341|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051937|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK086307|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK169780|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr11_-_85048228_85048358	0.475485	HIF1A.p2	AK122222|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK132963|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	AK005440|Appbp2|66884|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm9_v1_chr17_-_25023253_25023304	0.475401	HIF1A.p2	AK169896|Nubp2|26426|nucleotide binding protein 2	AF114169|Nubp2|26426|nucleotide binding protein 2	BC012635|Nubp2|26426|nucleotide binding protein 2	AK003816|Nubp2|26426|nucleotide binding protein 2	NM_011956|Nubp2|26426|nucleotide binding protein 2
mm9_v1_chr8_-_124984513_124984632	0.475185	HIF1A.p2	AF133714|Snai3|30927|snail homolog 3 (Drosophila)	AF195655|Snai3|30927|snail homolog 3 (Drosophila)	BC100724|Snai3|30927|snail homolog 3 (Drosophila)	BC100726|Snai3|30927|snail homolog 3 (Drosophila)	BC100727|Snai3|30927|snail homolog 3 (Drosophila)	AK089285|Snai3|30927|snail homolog 3 (Drosophila)	AK042234|Snai3|30927|snail homolog 3 (Drosophila)	NM_013914|Snai3|30927|snail homolog 3 (Drosophila)	AK153633|Snai3|30927|snail homolog 3 (Drosophila)
mm9_v1_chr16_+_49855691_49855777	0.475132	HIF1A.p2	NM_010581|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	Z25524|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr12_-_80108263_80108327	0.473208	HIF1A.p2	BC066067|Tmem229b|268567|transmembrane protein 229B	NM_178745|Tmem229b|268567|transmembrane protein 229B	AK033403|Tmem229b|268567|transmembrane protein 229B	AK053623|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chr2_+_132088957_132088969	0.472817	HIF1A.p2	AY159802|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
mm9_v1_chr7_-_150785913_150785996	0.47185	HIF1A.p2	BC054717|Cars|27267|cysteinyl-tRNA synthetase	BC058954|Cars|27267|cysteinyl-tRNA synthetase	NM_013742|Cars|27267|cysteinyl-tRNA synthetase	AJ276796|Cars|27267|cysteinyl-tRNA synthetase	AK033328|Cars|27267|cysteinyl-tRNA synthetase	AK037227|Cars|27267|cysteinyl-tRNA synthetase	AK047027|Cars|27267|cysteinyl-tRNA synthetase	AK077558|Cars|27267|cysteinyl-tRNA synthetase	AK133205|Cars|27267|cysteinyl-tRNA synthetase	AK135433|Cars|27267|cysteinyl-tRNA synthetase	AK152866|Cars|27267|cysteinyl-tRNA synthetase
mm9_v1_chr14_+_12386043_12386066	0.471766	HIF1A.p2	BC079595|Ptprg|19270|protein tyrosine phosphatase, receptor type, G	NM_008981|Ptprg|19270|protein tyrosine phosphatase, receptor type, G
mm9_v1_chr15_+_89203967_89204056	0.471416	HIF1A.p2	AK086661|4930423K06Rik|74640|RIKEN cDNA 4930423K06 gene
mm9_v1_chr17_-_24615972_24616025	0.471054	HIF1A.p2	AF237676|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK002751|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK083731|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	BC015279|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK048102|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK038515|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK077680|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK088951|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	AK040100|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)	NM_019988|Mlst8|56716|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm9_v1_chr8_-_126506732_126506777	0.468471	HIF1A.p2	AK081782|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10	AK011569|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10	AF266284|Abcb10|56199|ATP-binding cassette, sub-family B (MDR/TAP), member 10
mm9_v1_chr17_-_6987068_6987083	0.467658	HIF1A.p2	BC098502|Ezr|22350|ezrin	X60671|Ezr|22350|ezrin
mm9_v1_chr11_-_109472695_109472714	0.467183	HIF1A.p2	NM_145940|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK031672|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK045131|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK050495|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1
mm9_v1_chr13_+_69750891_69750922	0.466043	HIF1A.p2	NM_145354|Nsun2|28114|NOL1/NOP2/Sun domain family member 2	AK154789|Nsun2|28114|NOL1/NOP2/Sun domain family member 2
mm9_v1_chr9_-_113617224_113617390	0.465538	HIF1A.p2	AJ005073|Pdcd6ip|18571|programmed cell death 6 interacting protein	AJ005074|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC051123|Pdcd6ip|18571|programmed cell death 6 interacting protein	BC026823|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK167574|Pdcd6ip|18571|programmed cell death 6 interacting protein	AF119955|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK029827|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK129340|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK147736|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK031256|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK033943|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK145893|Pdcd6ip|18571|programmed cell death 6 interacting protein	AK169704|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164677|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_001164678|Pdcd6ip|18571|programmed cell death 6 interacting protein	NM_011052|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr15_-_93166789_93166977	0.46537	HIF1A.p2	AK184096|Yaf2|67057|YY1 associated factor 2	AK012787|Yaf2|67057|YY1 associated factor 2
mm9_v1_chr5_+_23670780_23670845	0.462506	HIF1A.p2	AK078478|Nupl2|231042|nucleoporin like 2	NM_153092|Nupl2|231042|nucleoporin like 2	AK077066|Nupl2|231042|nucleoporin like 2	BC033270|Nupl2|231042|nucleoporin like 2
mm9_v1_chr4_-_46548933_46549015	0.462101	HIF1A.p2	AK133220|Trim14|74735|tripartite motif-containing 14	AK148837|Trim14|74735|tripartite motif-containing 14	AK017887|Trim14|74735|tripartite motif-containing 14	AK172895|Trim14|74735|tripartite motif-containing 14	AK076277|Trim14|74735|tripartite motif-containing 14	BC116738|Trim14|74735|tripartite motif-containing 14	BC119130|Trim14|74735|tripartite motif-containing 14	AB117644|Trim14|74735|tripartite motif-containing 14	NM_029077|Trim14|74735|tripartite motif-containing 14
mm9_v1_chr1_-_194597214_194597412	0.462052	HIF1A.p2	AK028230|Hhat|226861|hedgehog acyltransferase	AK134661|Hhat|226861|hedgehog acyltransferase	AK172126|Hhat|226861|hedgehog acyltransferase	BC008159|Hhat|226861|hedgehog acyltransferase	NM_144881|Hhat|226861|hedgehog acyltransferase
mm9_v1_chr18_+_56867378_56867570	0.461666	HIF1A.p2	AK079511|Lmnb1|16906|lamin B1	AK132252|Lmnb1|16906|lamin B1	NM_010721|Lmnb1|16906|lamin B1	AK089110|Lmnb1|16906|lamin B1	BC052729|Lmnb1|16906|lamin B1	BC058392|Lmnb1|16906|lamin B1	M35153|Lmnb1|16906|lamin B1	X16705|Lmnb1|16906|lamin B1
mm9_v1_chr13_-_49063376_49063462	0.461569	HIF1A.p2	AK172909|Fam120a|218236|family with sequence similarity 120, member A
mm9_v1_chr6_+_31348811_31348859	0.459419	HIF1A.p2	AK037967|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	NM_013791|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK165239|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK077541|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK164822|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	BC013703|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK171980|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	U72194|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs	AK155457|Mkln1|27418|muskelin 1, intracellular mediator containing kelch motifs
mm9_v1_chr17_-_6476249_6476283	0.458351	HIF1A.p2	AK166076|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene	BC147312|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene	BC147313|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene
mm9_v1_chr10_-_79896386_79896387	0.458052	HIF1A.p2	AK146786|Tcf3|21423|transcription factor 3
mm9_v1_chr11_+_74584328_74584437	0.457246	HIF1A.p2	AK013306|Mett10d|67493|methyltransferase 10 domain containing	BC022902|Mett10d|67493|methyltransferase 10 domain containing	AK145022|Mett10d|67493|methyltransferase 10 domain containing	AK011780|Mett10d|67493|methyltransferase 10 domain containing	AK012739|Mett10d|67493|methyltransferase 10 domain containing	NM_026197|Mett10d|67493|methyltransferase 10 domain containing	AK145662|Mett10d|67493|methyltransferase 10 domain containing	AK029045|Mett10d|67493|methyltransferase 10 domain containing	AK161574|Mett10d|67493|methyltransferase 10 domain containing	BC003467|Mett10d|67493|methyltransferase 10 domain containing	AK168798|Mett10d|67493|methyltransferase 10 domain containing	BC037452|Mett10d|67493|methyltransferase 10 domain containing	BC054724|Mett10d|67493|methyltransferase 10 domain containing	BC049897|Mett10d|67493|methyltransferase 10 domain containing
mm9_v1_chr12_+_8681058_8681080	0.455916	HIF1A.p2	NM_001160219|Pum2|80913|pumilio 2 (Drosophila)	NM_001160220|Pum2|80913|pumilio 2 (Drosophila)	AK147617|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr5_+_140019846_140019918	0.455642	HIF1A.p2	AK082472|Uncx|22255|UNC homeobox	NM_013702|Uncx|22255|UNC homeobox	AF247550|Uncx|22255|UNC homeobox	Z96107|Uncx|22255|UNC homeobox	BC051973|Uncx|22255|UNC homeobox	AJ001116|Uncx|22255|UNC homeobox	S83543|Uncx|22255|UNC homeobox
mm9_v1_chrX_-_34442878_34442893	0.454014	HIF1A.p2	AK042690|Nkrf|77286|NF-kappaB repressing factor	NM_029891|Nkrf|77286|NF-kappaB repressing factor
mm9_v1_chr3_+_126066744_126066789	0.453924	HIF1A.p2	AK034584|Arsj|271970|arylsulfatase J	AK034454|Arsj|271970|arylsulfatase J	NM_173451|Arsj|271970|arylsulfatase J	AK046410|Arsj|271970|arylsulfatase J	AK052931|Arsj|271970|arylsulfatase J
mm9_v1_chr3_+_102975621_102975695	0.452152	HIF1A.p2	NM_026602|Bcas2|68183|breast carcinoma amplified sequence 2	BC013627|Bcas2|68183|breast carcinoma amplified sequence 2	BC037062|Bcas2|68183|breast carcinoma amplified sequence 2	AK018786|Bcas2|68183|breast carcinoma amplified sequence 2	AK005825|Bcas2|68183|breast carcinoma amplified sequence 2	AK020098|Bcas2|68183|breast carcinoma amplified sequence 2	AK153513|Bcas2|68183|breast carcinoma amplified sequence 2	AK166967|Bcas2|68183|breast carcinoma amplified sequence 2	AY043239|Bcas2|68183|breast carcinoma amplified sequence 2	BC023382|Bcas2|68183|breast carcinoma amplified sequence 2
mm9_v1_chr10_+_79957650_79957698	0.451488	HIF1A.p2	BC058700|Onecut3|246086|one cut domain, family member 3	NM_139226|Onecut3|246086|one cut domain, family member 3	AY080897|Onecut3|246086|one cut domain, family member 3
mm9_v1_chr9_+_59387346_59387423	0.451229	HIF1A.p2	AK144168|Hexa|15211|hexosaminidase A
mm9_v1_chr4_+_106584314_106584344	0.450508	HIF1A.p2	BC003430|Ssbp3|72475|single-stranded DNA binding protein 3	AF500117|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr11_-_77978936_77979062	0.449418	HIF1A.p2	AK178796|Traf4|22032|TNF receptor associated factor 4	AF233449|Traf4|22032|TNF receptor associated factor 4	AK035056|Traf4|22032|TNF receptor associated factor 4	AK040877|Traf4|22032|TNF receptor associated factor 4	BC020455|Traf4|22032|TNF receptor associated factor 4	AK053900|Traf4|22032|TNF receptor associated factor 4	NM_009423|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr2_+_170321927_170322026	0.449251	HIF1A.p2	BC065407|Pfdn4|109054|prefoldin 4	NM_001013369|Pfdn4|109054|prefoldin 4	BC147673|Pfdn4|109054|prefoldin 4	BC147674|Pfdn4|109054|prefoldin 4
mm9_v1_chr11_+_68505612_68505615	0.446111	HIF1A.p2	AK029236|Myh10|77579|myosin, heavy polypeptide 10, non-muscle	BC098465|Myh10|77579|myosin, heavy polypeptide 10, non-muscle
mm9_v1_chr1_-_37486768_37486947	0.445494	HIF1A.p2	AK177444|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK218336|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK018255|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK040907|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK050432|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	BC002137|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK166651|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK169639|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	NM_198006|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene
mm9_v1_chr1_-_59293936_59294089	0.444527	HIF1A.p2	AK029858|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_001159948|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC046828|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	BC031479|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	AB053307|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_028717|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)	NM_146109|Als2|74018|amyotrophic lateral sclerosis 2 (juvenile) homolog (human)
mm9_v1_chr3_+_37538897_37539001	0.441946	HIF1A.p2	AF176903|Spry1|24063|sprouty homolog 1 (Drosophila)	BC051977|Spry1|24063|sprouty homolog 1 (Drosophila)
mm9_v1_chr9_-_21657048_21657078	0.440461	HIF1A.p2	AK049320|Dock6|319899|dedicator of cytokinesis 6	AK080190|Dock6|319899|dedicator of cytokinesis 6	AK145109|Dock6|319899|dedicator of cytokinesis 6	NM_177030|Dock6|319899|dedicator of cytokinesis 6
mm9_v1_chr19_+_7131325_7131532	0.440336	HIF1A.p2	BC008653|Macrod1|107227|MACRO domain containing 1
mm9_v1_chrX_+_34283626_34283705	0.439218	HIF1A.p2	BC147709|Slc25a43|194744|solute carrier family 25, member 43	BC147717|Slc25a43|194744|solute carrier family 25, member 43	BC172137|Slc25a43|194744|solute carrier family 25, member 43	NM_001085497|Slc25a43|194744|solute carrier family 25, member 43	AK153028|Slc25a43|194744|solute carrier family 25, member 43
mm9_v1_chr7_+_86198368_86198368	0.439018	HIF1A.p2	L07049|Acan|11595|aggrecan	NM_007424|Acan|11595|aggrecan
mm9_v1_chr9_-_116084154_116084277	0.438274	HIF1A.p2	AF406755|Tgfbr2|21813|transforming growth factor, beta receptor II	S69114|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr17_-_6987100_6987128	0.436218	HIF1A.p2	AK002766|Ezr|22350|ezrin	AK168410|Ezr|22350|ezrin	AK172336|Ezr|22350|ezrin	AK004588|Ezr|22350|ezrin	AK135194|Ezr|22350|ezrin	AK135353|Ezr|22350|ezrin	AK159717|Ezr|22350|ezrin	AK159824|Ezr|22350|ezrin	AK159937|Ezr|22350|ezrin	AK166191|Ezr|22350|ezrin	AK168840|Ezr|22350|ezrin	AK170610|Ezr|22350|ezrin	AK145707|Ezr|22350|ezrin	NM_009510|Ezr|22350|ezrin
mm9_v1_chr2_+_34965011_34965138	0.435341	HIF1A.p2	AK041715|Cep110|26920|centrosomal protein 110	NM_012018|Cep110|26920|centrosomal protein 110	AK031338|Cep110|26920|centrosomal protein 110	AK020148|Cep110|26920|centrosomal protein 110	BC038386|Cep110|26920|centrosomal protein 110	BC158010|Cep110|26920|centrosomal protein 110
mm9_v1_chr2_-_152841062_152841101	0.435132	HIF1A.p2	AY286302|Pdrg1|68559|p53 and DNA damage regulated 1
mm9_v1_chr1_-_69154627_69154642	0.434617	HIF1A.p2	AK144050|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_010154|Erbb4|13869|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
mm9_v1_chr2_-_38781939_38781980	0.430864	HIF1A.p2	U14666|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_010264|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	U09563|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr10_-_114688440_114688479	0.430773	HIF1A.p2	BC032087|Tbc1d15|66687|TBC1 domain family, member 15	AK010704|Tbc1d15|66687|TBC1 domain family, member 15	DQ054831|Tbc1d15|66687|TBC1 domain family, member 15
mm9_v1_chr12_+_79849976_79850002	0.430465	HIF1A.p2	AK032731|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK162014|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC075698|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	AK014444|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr18_-_9450104_9450192	0.430317	HIF1A.p2	BC023321|Ccny|67974|cyclin Y	AK028696|Ccny|67974|cyclin Y	NM_026484|Ccny|67974|cyclin Y	AK014201|Ccny|67974|cyclin Y
mm9_v1_chr12_+_79850007_79850054	0.429384	HIF1A.p2	AF199008|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	BC138624|Mpp5|56217|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm9_v1_chr15_-_77672472_77672592	0.429115	HIF1A.p2	AK147216|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147221|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK165379|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC116417|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC116418|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC128497|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	BC128498|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147215|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147222|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147203|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AJ312390|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147223|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK040822|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK083071|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147209|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147210|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147235|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147296|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147407|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147233|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147206|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK053221|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147208|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147430|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	NM_022410|Myh9|17886|myosin, heavy polypeptide 9, non-muscle	AK147211|Myh9|17886|myosin, heavy polypeptide 9, non-muscle
mm9_v1_chr10_+_79240035_79240045	0.428981	HIF1A.p2	AK087247|Fstl3|83554|follistatin-like 3	AF276238|Fstl3|83554|follistatin-like 3	AB024429|Fstl3|83554|follistatin-like 3	AF310616|Fstl3|83554|follistatin-like 3
mm9_v1_chr7_+_53631843_53631909	0.428976	HIF1A.p2	AK076157|Myod1|17927|myogenic differentiation 1	NM_010866|Myod1|17927|myogenic differentiation 1	AK142859|Myod1|17927|myogenic differentiation 1	M84918|Myod1|17927|myogenic differentiation 1	M18779|Myod1|17927|myogenic differentiation 1	BC103613|Myod1|17927|myogenic differentiation 1	BC103618|Myod1|17927|myogenic differentiation 1	BC103619|Myod1|17927|myogenic differentiation 1
mm9_v1_chr1_-_135320788_135320788	0.428413	HIF1A.p2	NM_011439|Sox13|20668|SRY-box containing gene 13
mm9_v1_chr11_-_104303565_104303604	0.426963	HIF1A.p2	AK153679|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	AK122484|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene	NM_001081045|1700081L11Rik|76719|RIKEN cDNA 1700081L11 gene
mm9_v1_chr6_-_71858736_71858760	0.426671	HIF1A.p2	AK032831|Ptcd3|69956|pentatricopeptide repeat domain 3	AK011665|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146005|Ptcd3|69956|pentatricopeptide repeat domain 3	AK172480|Ptcd3|69956|pentatricopeptide repeat domain 3	BC115434|Ptcd3|69956|pentatricopeptide repeat domain 3	AK146172|Ptcd3|69956|pentatricopeptide repeat domain 3	NM_027275|Ptcd3|69956|pentatricopeptide repeat domain 3
mm9_v1_chr5_+_32000312_32000424	0.42646	HIF1A.p2	AK156929|Bre|107976|brain and reproductive organ-expressed protein	AK020047|Bre|107976|brain and reproductive organ-expressed protein	BC061000|Bre|107976|brain and reproductive organ-expressed protein	AK050695|Bre|107976|brain and reproductive organ-expressed protein	AK080991|Bre|107976|brain and reproductive organ-expressed protein	AK166884|Bre|107976|brain and reproductive organ-expressed protein	AF440752|Bre|107976|brain and reproductive organ-expressed protein	AF527952|Bre|107976|brain and reproductive organ-expressed protein	AF527953|Bre|107976|brain and reproductive organ-expressed protein	AF527954|Bre|107976|brain and reproductive organ-expressed protein	AF527955|Bre|107976|brain and reproductive organ-expressed protein	AF538925|Bre|107976|brain and reproductive organ-expressed protein	NM_144541|Bre|107976|brain and reproductive organ-expressed protein	NM_181279|Bre|107976|brain and reproductive organ-expressed protein	NM_181280|Bre|107976|brain and reproductive organ-expressed protein	NM_181281|Bre|107976|brain and reproductive organ-expressed protein	NM_181282|Bre|107976|brain and reproductive organ-expressed protein
mm9_v1_chr6_-_50211753_50211973	0.424018	HIF1A.p2	AK089459|Dfna5|54722|deafness, autosomal dominant 5 (human)	AK171278|Dfna5|54722|deafness, autosomal dominant 5 (human)	AF073309|Dfna5|54722|deafness, autosomal dominant 5 (human)	NM_018769|Dfna5|54722|deafness, autosomal dominant 5 (human)	BC051962|Dfna5|54722|deafness, autosomal dominant 5 (human)	BC086618|Dfna5|54722|deafness, autosomal dominant 5 (human)	AK041358|Dfna5|54722|deafness, autosomal dominant 5 (human)
mm9_v1_chr8_-_98412271_98412300	0.422151	HIF1A.p2	AK098166|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK167767|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	BC089015|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK155075|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149886|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK149926|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK136556|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	AK152921|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr4_+_118781336_118781380	0.421959	HIF1A.p2	NM_011400|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	M23384|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	BC055340|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1
mm9_v1_chr10_+_93103936_93104198	0.42129	HIF1A.p2	AF281278|Ntn4|57764|netrin 4	BC119182|Ntn4|57764|netrin 4	BC119184|Ntn4|57764|netrin 4	AF268066|Ntn4|57764|netrin 4
mm9_v1_chr12_-_36883307_36883421	0.419076	HIF1A.p2	BC058796|Bzw2|66912|basic leucine zipper and W2 domains 2	AB244988|Bzw2|66912|basic leucine zipper and W2 domains 2	BC013060|Bzw2|66912|basic leucine zipper and W2 domains 2	AK088108|Bzw2|66912|basic leucine zipper and W2 domains 2	AK132595|Bzw2|66912|basic leucine zipper and W2 domains 2	AK162647|Bzw2|66912|basic leucine zipper and W2 domains 2	AK011253|Bzw2|66912|basic leucine zipper and W2 domains 2	AK160544|Bzw2|66912|basic leucine zipper and W2 domains 2	AK003229|Bzw2|66912|basic leucine zipper and W2 domains 2	NM_025840|Bzw2|66912|basic leucine zipper and W2 domains 2
mm9_v1_chr6_-_97098845_97098885	0.418117	HIF1A.p2	AK037507|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene	NM_175313|A130022J15Rik|101351|RIKEN cDNA A130022J15 gene
mm9_v1_chr2_+_156688814_156688934	0.416273	HIF1A.p2	NM_026124|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK003568|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK078178|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK031002|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK002452|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	AK155559|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene	BC019445|1110008F13Rik|67388|RIKEN cDNA 1110008F13 gene
mm9_v1_chr9_+_31193769_31193815	0.414749	HIF1A.p2	NM_172766|Nfrkb|235134|nuclear factor related to kappa B binding protein	AK041206|Nfrkb|235134|nuclear factor related to kappa B binding protein	AK043432|Nfrkb|235134|nuclear factor related to kappa B binding protein	BC060076|Nfrkb|235134|nuclear factor related to kappa B binding protein	BC033595|Nfrkb|235134|nuclear factor related to kappa B binding protein	BC059861|Nfrkb|235134|nuclear factor related to kappa B binding protein
mm9_v1_chr9_-_81526158_81526221	0.413466	HIF1A.p2	NM_010482|Htr1b|15551|5-hydroxytryptamine (serotonin) receptor 1B	BC119129|Htr1b|15551|5-hydroxytryptamine (serotonin) receptor 1B	BC131951|Htr1b|15551|5-hydroxytryptamine (serotonin) receptor 1B
mm9_v1_chr1_-_75139207_75139284	0.413166	HIF1A.p2	AK169779|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK145962|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr17_-_31649139_31649255	0.410908	HIF1A.p2	AK213574|Wdr4|57773|WD repeat domain 4	AK164160|Wdr4|57773|WD repeat domain 4	AJ271892|Wdr4|57773|WD repeat domain 4	AJ271893|Wdr4|57773|WD repeat domain 4	AK035125|Wdr4|57773|WD repeat domain 4	BC039272|Wdr4|57773|WD repeat domain 4	AK152271|Wdr4|57773|WD repeat domain 4	AK153161|Wdr4|57773|WD repeat domain 4	AK144821|Wdr4|57773|WD repeat domain 4
mm9_v1_chr3_+_94641626_94641643	0.410881	HIF1A.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr11_+_103828184_103828347	0.41062	HIF1A.p2	AK053123|Arf2|11841|ADP-ribosylation factor 2	NM_007477|Arf2|11841|ADP-ribosylation factor 2	BC010487|Arf2|11841|ADP-ribosylation factor 2
mm9_v1_chr14_-_21000972_21001030	0.410601	HIF1A.p2	BC051088|Kcnk5|16529|potassium channel, subfamily K, member 5	BC058164|Kcnk5|16529|potassium channel, subfamily K, member 5	AK085330|Kcnk5|16529|potassium channel, subfamily K, member 5	AK172608|Kcnk5|16529|potassium channel, subfamily K, member 5	NM_021542|Kcnk5|16529|potassium channel, subfamily K, member 5	BC034012|Kcnk5|16529|potassium channel, subfamily K, member 5	AK132172|Kcnk5|16529|potassium channel, subfamily K, member 5
mm9_v1_chr5_+_53225253_53225293	0.40927	HIF1A.p2	AK166061|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr1_+_121423003_121423069	0.408494	HIF1A.p2	AK010846|Tmem185b|226351|transmembrane protein 185B
mm9_v1_chr7_+_35904347_35904361	0.407575	HIF1A.p2	AK155281|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha
mm9_v1_chr16_+_58670444_58670490	0.405472	HIF1A.p2	AK166512|Cpox|12892|coproporphyrinogen oxidase	BC017680|Cpox|12892|coproporphyrinogen oxidase
mm9_v1_chr1_-_95651403_95651427	0.403151	HIF1A.p2	NM_025920|Thap4|67026|THAP domain containing 4
mm9_v1_chr3_-_89856250_89856452	0.403033	HIF1A.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr15_-_38230397_38230491	0.402284	HIF1A.p2	BC003316|Klf10|21847|Kruppel-like factor 10	Z36270|Klf10|21847|Kruppel-like factor 10	AK154719|Klf10|21847|Kruppel-like factor 10	AF064088|Klf10|21847|Kruppel-like factor 10	AK043433|Klf10|21847|Kruppel-like factor 10	AK079679|Klf10|21847|Kruppel-like factor 10	AF049879|Klf10|21847|Kruppel-like factor 10	NM_013692|Klf10|21847|Kruppel-like factor 10	AK004906|Klf10|21847|Kruppel-like factor 10
mm9_v1_chr17_+_32421723_32421761	0.401942	HIF1A.p2	
mm9_v1_chr4_-_129318264_129318285	0.40181	HIF1A.p2	AK150240|Txlna|109658|taxilin alpha	AK161649|Txlna|109658|taxilin alpha	AK171101|Txlna|109658|taxilin alpha	AK078192|Txlna|109658|taxilin alpha
mm9_v1_chr16_+_59471600_59471691	0.401296	HIF1A.p2	NM_025910|Mina|67014|myc induced nuclear antigen	AK007810|Mina|67014|myc induced nuclear antigen	AK032595|Mina|67014|myc induced nuclear antigen	AK013451|Mina|67014|myc induced nuclear antigen	AK014426|Mina|67014|myc induced nuclear antigen	AK019117|Mina|67014|myc induced nuclear antigen	AK031671|Mina|67014|myc induced nuclear antigen	BC025109|Mina|67014|myc induced nuclear antigen	BC058242|Mina|67014|myc induced nuclear antigen
mm9_v1_chr1_-_52290058_52290076	0.400373	HIF1A.p2	AK173039|Gls|14660|glutaminase	NM_001081081|Gls|14660|glutaminase	NM_001113383|Gls|14660|glutaminase
mm9_v1_chr15_+_78861339_78861436	0.399971	HIF1A.p2	AK087433|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AF093403|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK013138|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK075782|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK007395|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm9_v1_chr8_-_98412220_98412268	0.399805	HIF1A.p2	U82470|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	J02622|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial	NM_010325|Got2|14719|glutamate oxaloacetate transaminase 2, mitochondrial
mm9_v1_chr19_-_41459518_41459628	0.398177	HIF1A.p2	BC113141|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AF293806|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	NM_031376|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK087295|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK154326|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK171021|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170130|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170925|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK089785|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1
mm9_v1_chr3_-_102008512_102008615	0.398139	HIF1A.p2	AK167743|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	AF481860|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	NM_177545|Vangl1|229658|vang-like 1 (van gogh, Drosophila)
mm9_v1_chr11_+_80022524_80022572	0.397974	HIF1A.p2	AK147801|Rhot1|59040|ras homolog gene family, member T1	AK167502|Rhot1|59040|ras homolog gene family, member T1	NM_001163354|Rhot1|59040|ras homolog gene family, member T1	NM_001163355|Rhot1|59040|ras homolog gene family, member T1	NM_021536|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr5_-_115608123_115608152	0.392294	HIF1A.p2	BC058245|Mlec|109154|malectin	BC035300|Mlec|109154|malectin
mm9_v1_chr11_+_103828032_103828117	0.390235	HIF1A.p2	AK042977|Arf2|11841|ADP-ribosylation factor 2	AK077591|Arf2|11841|ADP-ribosylation factor 2	AK167653|Arf2|11841|ADP-ribosylation factor 2	AK167601|Arf2|11841|ADP-ribosylation factor 2	AK167133|Arf2|11841|ADP-ribosylation factor 2	AK169094|Arf2|11841|ADP-ribosylation factor 2	AK169412|Arf2|11841|ADP-ribosylation factor 2	D87899|Arf2|11841|ADP-ribosylation factor 2	AK031259|Arf2|11841|ADP-ribosylation factor 2
mm9_v1_chr10_+_93610663_93610767	0.389906	HIF1A.p2	AK146891|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	NM_011629|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK053907|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC090662|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC094580|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK149374|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1
mm9_v1_chr3_-_88754154_88754203	0.387985	HIF1A.p2	BC019566|Dap3|65111|death associated protein 3	NM_001164533|Dap3|65111|death associated protein 3	NM_022994|Dap3|65111|death associated protein 3
mm9_v1_chr7_+_35904310_35904321	0.387676	HIF1A.p2	NM_007678|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC011118|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC028890|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC051102|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha	BC058161|Cebpa|12606|CCAAT/enhancer binding protein (C/EBP), alpha
mm9_v1_chr9_-_59598416_59598455	0.386874	HIF1A.p2	BC037443|Senp8|71599|SUMO/sentrin specific peptidase 8	AK018606|Senp8|71599|SUMO/sentrin specific peptidase 8	AK029856|Senp8|71599|SUMO/sentrin specific peptidase 8	AK049120|Senp8|71599|SUMO/sentrin specific peptidase 8	AK136214|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172068|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172069|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172070|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_001172071|Senp8|71599|SUMO/sentrin specific peptidase 8	NM_027838|Senp8|71599|SUMO/sentrin specific peptidase 8
mm9_v1_chr16_+_49855786_49855899	0.386136	HIF1A.p2	AK151922|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	AB012693|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	BC012667|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr15_+_75771566_75771616	0.385402	HIF1A.p2	AK028561|Zfp623|78834|zinc finger protein 623
mm9_v1_chr10_-_80841099_80841253	0.384765	HIF1A.p2	AF083809|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	NM_019757|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK081476|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK163951|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK083686|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK155370|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK051993|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	BC006616|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK154822|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)	AK172679|Fzr1|56371|fizzy/cell division cycle 20 related 1 (Drosophila)
mm9_v1_chrX_-_92640149_92640178	0.384113	HIF1A.p2	BC053442|Fam123b|72345|family with sequence similarity 123, member B	AK012651|Fam123b|72345|family with sequence similarity 123, member B	AK049774|Fam123b|72345|family with sequence similarity 123, member B	NM_175179|Fam123b|72345|family with sequence similarity 123, member B
mm9_v1_chr17_-_56896933_56896960	0.382595	HIF1A.p2	BC057993|Nrtn|18188|neurturin	NM_008738|Nrtn|18188|neurturin	U78109|Nrtn|18188|neurturin
mm9_v1_chr16_+_5233683_5233739	0.381624	HIF1A.p2	AK145871|Alg1|208211|asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)	NM_145362|Alg1|208211|asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)	BC011281|Alg1|208211|asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)
mm9_v1_chr9_+_110034489_110034583	0.379425	HIF1A.p2	NM_009211|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK143485|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144122|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK133922|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	U85614|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK144631|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK145352|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	AK042194|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC056375|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC052423|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC053064|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	BC022173|Smarcc1|20588|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm9_v1_chr4_+_155186568_155186886	0.378959	HIF1A.p2	NM_207678|Ccnl2|56036|cyclin L2	AK007552|Ccnl2|56036|cyclin L2	BC132295|Ccnl2|56036|cyclin L2	AK048244|Ccnl2|56036|cyclin L2	AK156037|Ccnl2|56036|cyclin L2	AB041605|Ccnl2|56036|cyclin L2	AY337018|Ccnl2|56036|cyclin L2	AK169857|Ccnl2|56036|cyclin L2	BC023747|Ccnl2|56036|cyclin L2	AF211859|Ccnl2|56036|cyclin L2	AK044204|Ccnl2|56036|cyclin L2	AK008585|Ccnl2|56036|cyclin L2	AK138938|Ccnl2|56036|cyclin L2
mm9_v1_chr7_-_72017803_72017939	0.378153	HIF1A.p2	AF319979|Ndnl2|66647|necdin-like 2	BC034892|Ndnl2|66647|necdin-like 2	AK131157|Ndnl2|66647|necdin-like 2	AK010294|Ndnl2|66647|necdin-like 2	AK018250|Ndnl2|66647|necdin-like 2	BC092289|Ndnl2|66647|necdin-like 2	AK049759|Ndnl2|66647|necdin-like 2	AK076471|Ndnl2|66647|necdin-like 2	AK017727|Ndnl2|66647|necdin-like 2	NM_023239|Ndnl2|66647|necdin-like 2
mm9_v1_chr6_-_101327849_101327941	0.378131	HIF1A.p2	AK173098|Pdzrn3|55983|PDZ domain containing RING finger 3	HM560981|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127084|Pdzrn3|55983|PDZ domain containing RING finger 3	AF127085|Pdzrn3|55983|PDZ domain containing RING finger 3	NM_018884|Pdzrn3|55983|PDZ domain containing RING finger 3
mm9_v1_chr11_-_120657647_120657730	0.377303	HIF1A.p2	AK147967|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK037538|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK148307|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	AK088243|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)	NM_026824|Dus1l|68730|dihydrouridine synthase 1-like (S. cerevisiae)
mm9_v1_chr3_+_94217197_94217322	0.377011	HIF1A.p2	BC057030|Tdrkh|72634|tudor and KH domain containing protein	BC031886|Tdrkh|72634|tudor and KH domain containing protein	BC049363|Tdrkh|72634|tudor and KH domain containing protein	NM_028307|Tdrkh|72634|tudor and KH domain containing protein
mm9_v1_chr15_-_75724657_75724680	0.376181	HIF1A.p2	AK049157|Naprt1|223646|nicotinate phosphoribosyltransferase domain containing 1	BC058800|Naprt1|223646|nicotinate phosphoribosyltransferase domain containing 1
mm9_v1_chr2_+_166840778_166840830	0.376058	HIF1A.p2	AK138442|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	AK146469|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	AK134274|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC024730|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC024981|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC033398|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	NM_153065|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
mm9_v1_chr5_-_135727086_135727099	0.375987	HIF1A.p2	AK021164|Fzd9|14371|frizzled homolog 9 (Drosophila)
mm9_v1_chr2_-_44965603_44965763	0.374928	HIF1A.p2	AK012377|Zeb2|24136|zinc finger E-box binding homeobox 2	AF033116|Zeb2|24136|zinc finger E-box binding homeobox 2	AK141157|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chrX_-_91368713_91368747	0.3746	HIF1A.p2	L19714|Zfx|22764|zinc finger protein X-linked	AK145115|Zfx|22764|zinc finger protein X-linked	NM_001044386|Zfx|22764|zinc finger protein X-linked	NM_011768|Zfx|22764|zinc finger protein X-linked
mm9_v1_chr7_-_134852269_134852320	0.373504	HIF1A.p2	BC005673|Bcl7c|12055|B-cell CLL/lymphoma 7C	NM_009746|Bcl7c|12055|B-cell CLL/lymphoma 7C	AK049064|Bcl7c|12055|B-cell CLL/lymphoma 7C
mm9_v1_chr3_-_104620975_104621042	0.373413	HIF1A.p2	AK048523|Mov10|17454|Moloney leukemia virus 10
mm9_v1_chr6_-_119494295_119494364	0.372425	HIF1A.p2	BC051406|Wnt5b|22419|wingless-related MMTV integration site 5B	AK013218|Wnt5b|22419|wingless-related MMTV integration site 5B	NM_009525|Wnt5b|22419|wingless-related MMTV integration site 5B
mm9_v1_chr11_+_60541880_60542010	0.372322	HIF1A.p2	NM_001009927|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK156917|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	AK171444|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)	BC088984|Smcr7|237781|Smith-Magenis syndrome chromosome region, candidate 7 homolog (human)
mm9_v1_chr1_+_63223396_63223420	0.371953	HIF1A.p2	NM_018796|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr11_-_75003955_75003987	0.371696	HIF1A.p2	BC044663|Dph1|116905|DPH1 homolog (S. cerevisiae)	BC080761|Dph1|116905|DPH1 homolog (S. cerevisiae)	AK015645|Dph1|116905|DPH1 homolog (S. cerevisiae)	AK128996|Dph1|116905|DPH1 homolog (S. cerevisiae)	AY078170|Dph1|116905|DPH1 homolog (S. cerevisiae)	NM_144491|Dph1|116905|DPH1 homolog (S. cerevisiae)	AK082812|Dph1|116905|DPH1 homolog (S. cerevisiae)
mm9_v1_chr9_-_65239349_65239458	0.371204	HIF1A.p2	AK048611|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	BC139793|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	NM_028974|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13
mm9_v1_chr12_+_114336416_114336628	0.370337	HIF1A.p2	BC112910|Mta1|116870|metastasis associated 1	NM_054081|Mta1|116870|metastasis associated 1	AF288137|Mta1|116870|metastasis associated 1	AF463504|Mta1|116870|metastasis associated 1
mm9_v1_chr5_+_130230890_130230961	0.369436	HIF1A.p2	NM_008095|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr2_-_167515255_167515321	0.368755	HIF1A.p2	AK080983|Tmem189|407243|transmembrane protein 189
mm9_v1_chr4_+_101091875_101091893	0.368398	HIF1A.p2	AK134600|Ak4|11639|adenylate kinase 4	NM_001177602|Ak4|11639|adenylate kinase 4
mm9_v1_chr1_-_174562955_174562999	0.36813	HIF1A.p2	AK004912|Dusp23|68440|dual specificity phosphatase 23
mm9_v1_chr15_+_75771381_75771478	0.363966	HIF1A.p2	AK046806|Zfp623|78834|zinc finger protein 623	AY610936|Zfp623|78834|zinc finger protein 623	NM_030199|Zfp623|78834|zinc finger protein 623	AK169386|Zfp623|78834|zinc finger protein 623	AK172985|Zfp623|78834|zinc finger protein 623	AK030476|Zfp623|78834|zinc finger protein 623	BC021834|Zfp623|78834|zinc finger protein 623
mm9_v1_chr3_+_94641479_94641499	0.36394	HIF1A.p2	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chrX_+_54307050_54307082	0.363096	HIF1A.p2	AK011234|Htatsf1|72459|HIV TAT specific factor 1	AK005527|Htatsf1|72459|HIV TAT specific factor 1	AK139853|Htatsf1|72459|HIV TAT specific factor 1	AK049495|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr2_-_153458365_153458496	0.362683	HIF1A.p2	AK177311|Commd7|99311|COMM domain containing 7	BC065794|Commd7|99311|COMM domain containing 7	AK164805|Commd7|99311|COMM domain containing 7	BC092215|Commd7|99311|COMM domain containing 7	BC003310|Commd7|99311|COMM domain containing 7	AK077349|Commd7|99311|COMM domain containing 7	AK089926|Commd7|99311|COMM domain containing 7	AK169037|Commd7|99311|COMM domain containing 7	AK046582|Commd7|99311|COMM domain containing 7	AK008447|Commd7|99311|COMM domain containing 7	BC094216|Commd7|99311|COMM domain containing 7	AK078774|Commd7|99311|COMM domain containing 7	AK009274|Commd7|99311|COMM domain containing 7
mm9_v1_chr7_-_117987922_117987942	0.361224	HIF1A.p2	AK006791|Rnf141|67150|ring finger protein 141
mm9_v1_chr13_+_45485106_45485325	0.360305	HIF1A.p2	AK034887|Mylip|218203|myosin regulatory light chain interacting protein	AK159478|Mylip|218203|myosin regulatory light chain interacting protein	NM_153789|Mylip|218203|myosin regulatory light chain interacting protein	AK171888|Mylip|218203|myosin regulatory light chain interacting protein	BC010206|Mylip|218203|myosin regulatory light chain interacting protein	AY434449|Mylip|218203|myosin regulatory light chain interacting protein	NM_181043|Mylip|218203|myosin regulatory light chain interacting protein
mm9_v1_chr4_+_63219786_63219927	0.360261	HIF1A.p2	AK144990|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK030466|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK206525|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene	AK161160|6330416G13Rik|230279|RIKEN cDNA 6330416G13 gene
mm9_v1_chr7_+_135110992_135111067	0.35866	HIF1A.p2	NM_139149|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK132141|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK134491|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK146198|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK149118|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK145582|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK032815|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK038226|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK139960|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AK172554|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC058247|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC011078|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	BC040827|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)	AF224264|Fus|233908|fusion, derived from t(12;16) malignant liposarcoma (human)
mm9_v1_chr4_-_129317873_129317883	0.357155	HIF1A.p2	BC060227|Txlna|109658|taxilin alpha	BC065115|Txlna|109658|taxilin alpha	NM_001005506|Txlna|109658|taxilin alpha
mm9_v1_chr14_+_73909826_73909861	0.356387	HIF1A.p2	AK145636|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK078288|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010270|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	AK010686|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	BC024950|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)	NM_026119|Med4|67381|mediator of RNA polymerase II transcription, subunit 4 homolog (yeast)
mm9_v1_chr3_+_52845429_52845504	0.355856	HIF1A.p2	BC052079|Lhfp|108927|lipoma HMGIC fusion partner	NM_175386|Lhfp|108927|lipoma HMGIC fusion partner	AK159549|Lhfp|108927|lipoma HMGIC fusion partner	AK159126|Lhfp|108927|lipoma HMGIC fusion partner	AK171791|Lhfp|108927|lipoma HMGIC fusion partner	AK172390|Lhfp|108927|lipoma HMGIC fusion partner	AK172532|Lhfp|108927|lipoma HMGIC fusion partner	BC095934|Lhfp|108927|lipoma HMGIC fusion partner
mm9_v1_chr3_+_145421870_145422044	0.35584	HIF1A.p2	AK149185|Ddah1|69219|dimethylarginine dimethylaminohydrolase 1
mm9_v1_chr10_+_125403274_125403331	0.354829	HIF1A.p2	AK035166|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	NM_177152|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	AK137007|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	BC065142|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3	AY505341|Lrig3|320398|leucine-rich repeats and immunoglobulin-like domains 3
mm9_v1_chr17_+_57129686_57129814	0.353483	HIF1A.p2	NM_017393|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK145765|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	BC001998|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AJ005253|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK004024|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK168053|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK002238|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	AK147719|Clpp|53895|caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)
mm9_v1_chr4_-_129349948_129350020	0.353466	HIF1A.p2	AK084212|Kpna6|16650|karyopherin (importin) alpha 6	AK046371|Kpna6|16650|karyopherin (importin) alpha 6	AK154882|Kpna6|16650|karyopherin (importin) alpha 6	NM_008468|Kpna6|16650|karyopherin (importin) alpha 6
mm9_v1_chr19_-_6996189_6996331	0.353367	HIF1A.p2	BC034165|Esrra|26379|estrogen related receptor, alpha	BC138586|Esrra|26379|estrogen related receptor, alpha	BC171958|Esrra|26379|estrogen related receptor, alpha	U85259|Esrra|26379|estrogen related receptor, alpha	AK019222|Esrra|26379|estrogen related receptor, alpha	AK046588|Esrra|26379|estrogen related receptor, alpha	AK156371|Esrra|26379|estrogen related receptor, alpha	NM_007953|Esrra|26379|estrogen related receptor, alpha	BC039774|Esrra|26379|estrogen related receptor, alpha
mm9_v1_chr2_-_30329717_30329736	0.352569	HIF1A.p2	BC003464|Ier5l|72500|immediate early response 5-like	BC010234|Ier5l|72500|immediate early response 5-like	BC040084|Ier5l|72500|immediate early response 5-like	NM_030244|Ier5l|72500|immediate early response 5-like	AK012145|Ier5l|72500|immediate early response 5-like
mm9_v1_chr2_-_39046224_39046253	0.351608	HIF1A.p2	BC132485|Scai|320271|suppressor of cancer cell invasion	BC144986|Scai|320271|suppressor of cancer cell invasion	BC144987|Scai|320271|suppressor of cancer cell invasion	BC144989|Scai|320271|suppressor of cancer cell invasion	AK044772|Scai|320271|suppressor of cancer cell invasion	AK082408|Scai|320271|suppressor of cancer cell invasion	AK083280|Scai|320271|suppressor of cancer cell invasion	NM_178778|Scai|320271|suppressor of cancer cell invasion	AK163712|Scai|320271|suppressor of cancer cell invasion
mm9_v1_chr11_+_49838770_49838986	0.35128	HIF1A.p2	BC018199|Rnf130|59044|ring finger protein 130	NM_021540|Rnf130|59044|ring finger protein 130	AK011088|Rnf130|59044|ring finger protein 130	BC048901|Rnf130|59044|ring finger protein 130	AK220529|Rnf130|59044|ring finger protein 130	AF171875|Rnf130|59044|ring finger protein 130	AK166468|Rnf130|59044|ring finger protein 130
mm9_v1_chr5_+_100468998_100469257	0.351094	HIF1A.p2	AK167575|Enoph1|67870|enolase-phosphatase 1	NM_001163035|Enoph1|67870|enolase-phosphatase 1	NM_026421|Enoph1|67870|enolase-phosphatase 1	AK079062|Enoph1|67870|enolase-phosphatase 1	AK009954|Enoph1|67870|enolase-phosphatase 1	AK082747|Enoph1|67870|enolase-phosphatase 1	AK152021|Enoph1|67870|enolase-phosphatase 1	AK159356|Enoph1|67870|enolase-phosphatase 1	AK168696|Enoph1|67870|enolase-phosphatase 1	AK080714|Enoph1|67870|enolase-phosphatase 1	BC021429|Enoph1|67870|enolase-phosphatase 1	AK177338|Enoph1|67870|enolase-phosphatase 1	AK193770|Enoph1|67870|enolase-phosphatase 1
mm9_v1_chr2_-_118982663_118982690	0.349844	HIF1A.p2	BC055754|Fam82a2|67809|family with sequence similarity 82, member A2	AK165302|Fam82a2|67809|family with sequence similarity 82, member A2	AK146299|Fam82a2|67809|family with sequence similarity 82, member A2	AK153369|Fam82a2|67809|family with sequence similarity 82, member A2	AK151090|Fam82a2|67809|family with sequence similarity 82, member A2	AK153322|Fam82a2|67809|family with sequence similarity 82, member A2
mm9_v1_chr10_+_5958432_5958574	0.349783	HIF1A.p2	AK132308|Zbtb2|381990|zinc finger and BTB domain containing 2	NM_001033466|Zbtb2|381990|zinc finger and BTB domain containing 2
mm9_v1_chr11_+_102137867_102137884	0.349433	HIF1A.p2	AK038411|Asb16|217217|ankyrin repeat and SOCS box-containing 16
mm9_v1_chr1_+_107887234_107887342	0.348192	HIF1A.p2	AK173248|Zcchc2|227449|zinc finger, CCHC domain containing 2
mm9_v1_chr16_+_32877857_32877985	0.347084	HIF1A.p2	NM_001159349|Fyttd1|69823|forty-two-three domain containing 1	NM_027226|Fyttd1|69823|forty-two-three domain containing 1	AK139638|Fyttd1|69823|forty-two-three domain containing 1	AK161252|Fyttd1|69823|forty-two-three domain containing 1	AK008130|Fyttd1|69823|forty-two-three domain containing 1	AK050479|Fyttd1|69823|forty-two-three domain containing 1	AK157602|Fyttd1|69823|forty-two-three domain containing 1	AK166032|Fyttd1|69823|forty-two-three domain containing 1	AK170511|Fyttd1|69823|forty-two-three domain containing 1	AK014447|Fyttd1|69823|forty-two-three domain containing 1	BC010204|Fyttd1|69823|forty-two-three domain containing 1	AK050448|Fyttd1|69823|forty-two-three domain containing 1	AK165633|Fyttd1|69823|forty-two-three domain containing 1	BC028253|Fyttd1|69823|forty-two-three domain containing 1	AK029785|Fyttd1|69823|forty-two-three domain containing 1	AJ344096|Fyttd1|69823|forty-two-three domain containing 1
mm9_v1_chr9_+_100544186_100544228	0.346679	HIF1A.p2	BC069841|Stag1|20842|stromal antigen 1
mm9_v1_chr2_+_120996896_120997011	0.346173	HIF1A.p2	NM_153387|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK038921|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK152984|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK153171|Tubgcp4|51885|tubulin, gamma complex associated protein 4	BC029106|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK051517|Tubgcp4|51885|tubulin, gamma complex associated protein 4	AK045305|Tubgcp4|51885|tubulin, gamma complex associated protein 4
mm9_v1_chr17_+_28046196_28046431	0.345568	HIF1A.p2	BC050847|Anks1|224650|ankyrin repeat and SAM domain containing 1	NM_181413|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK129094|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK147273|Anks1|224650|ankyrin repeat and SAM domain containing 1
mm9_v1_chr5_-_3596298_3596546	0.343237	HIF1A.p2	BC029549|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene	NM_172991|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene
mm9_v1_chr17_-_48061577_48061752	0.343047	HIF1A.p2	BC057110|Foxp4|74123|forkhead box P4	NM_001110824|Foxp4|74123|forkhead box P4	NM_001110825|Foxp4|74123|forkhead box P4	NM_028767|Foxp4|74123|forkhead box P4
mm9_v1_chr3_-_102007885_102007885	0.342415	HIF1A.p2	AK135230|Vangl1|229658|vang-like 1 (van gogh, Drosophila)	NM_001165951|Vangl1|229658|vang-like 1 (van gogh, Drosophila)
mm9_v1_chr5_-_147775315_147775391	0.341	HIF1A.p2	BC115684|Mtif3|76366|mitochondrial translational initiation factor 3	BC115685|Mtif3|76366|mitochondrial translational initiation factor 3	BC052439|Mtif3|76366|mitochondrial translational initiation factor 3	AK012733|Mtif3|76366|mitochondrial translational initiation factor 3	AK147090|Mtif3|76366|mitochondrial translational initiation factor 3	NM_029581|Mtif3|76366|mitochondrial translational initiation factor 3	AK088146|Mtif3|76366|mitochondrial translational initiation factor 3
mm9_v1_chr6_-_30908981_30908989	0.340594	HIF1A.p2	DQ534758|Klf14|619665|Kruppel-like factor 14	AK030435|Klf14|619665|Kruppel-like factor 14	NM_001135093|Klf14|619665|Kruppel-like factor 14
mm9_v1_chr7_-_35841450_35841562	0.339522	HIF1A.p2	AK171859|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	X55499|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK157391|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK159544|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AB012273|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	BC011319|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr8_-_127245800_127245897	0.338047	HIF1A.p2	AK212172|Ttc13|234875|tetratricopeptide repeat domain 13	BC079851|Ttc13|234875|tetratricopeptide repeat domain 13	BC072577|Ttc13|234875|tetratricopeptide repeat domain 13	AK148102|Ttc13|234875|tetratricopeptide repeat domain 13	AK144842|Ttc13|234875|tetratricopeptide repeat domain 13	NM_145607|Ttc13|234875|tetratricopeptide repeat domain 13	AK051200|Ttc13|234875|tetratricopeptide repeat domain 13	AK160894|Ttc13|234875|tetratricopeptide repeat domain 13
mm9_v1_chr7_-_91032695_91032850	0.338035	HIF1A.p2	AK162446|Mesdc1|80889|mesoderm development candidate 1	AK084510|Mesdc1|80889|mesoderm development candidate 1	AK089082|Mesdc1|80889|mesoderm development candidate 1	AK036338|Mesdc1|80889|mesoderm development candidate 1	NM_030705|Mesdc1|80889|mesoderm development candidate 1
mm9_v1_chr18_-_34166105_34166254	0.337722	HIF1A.p2	BC089158|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	AK140485|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr11_-_77326748_77326921	0.334671	HIF1A.p2	BC147324|Trp53i13|216964|transformation related protein 53 inducible protein 13	BC147325|Trp53i13|216964|transformation related protein 53 inducible protein 13	NM_001024920|Trp53i13|216964|transformation related protein 53 inducible protein 13
mm9_v1_chr2_+_164571458_164571553	0.333852	HIF1A.p2	AK018299|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK145239|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168357|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AK168315|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	BC003486|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	NM_133763|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1	AB045974|Dnttip1|76233|deoxynucleotidyltransferase, terminal, interacting protein 1
mm9_v1_chr6_-_50516456_50516542	0.333608	HIF1A.p2	BC034363|Cycs|13063|cytochrome c, somatic	BC094054|Cycs|13063|cytochrome c, somatic	AK088098|Cycs|13063|cytochrome c, somatic	AK143887|Cycs|13063|cytochrome c, somatic	NM_007808|Cycs|13063|cytochrome c, somatic	AK002732|Cycs|13063|cytochrome c, somatic	AK168017|Cycs|13063|cytochrome c, somatic	AK010651|Cycs|13063|cytochrome c, somatic	AK003168|Cycs|13063|cytochrome c, somatic	AK005336|Cycs|13063|cytochrome c, somatic
mm9_v1_chr8_-_20020246_20020303	0.33333	HIF1A.p2	BC086761|2610005L07Rik|381598|cadherin 11 pseudogene	BC086760|2610005L07Rik|381598|cadherin 11 pseudogene	AK134636|2610005L07Rik|381598|cadherin 11 pseudogene	AK135487|6820431F20Rik|547150|cadherin 11 pseudogene	BC064022|2610005L07Rik|381598|cadherin 11 pseudogene	AK011323|2610005L07Rik|381598|cadherin 11 pseudogene	AK017816|2610005L07Rik|381598|cadherin 11 pseudogene	AK081322|2610005L07Rik|381598|cadherin 11 pseudogene	AK012880|2610005L07Rik|381598|cadherin 11 pseudogene	AK167066|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK166663|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr7_+_134388053_134388144	0.33073	HIF1A.p2	BC139048|Zfp771|244216|zinc finger protein 771	BC139049|Zfp771|244216|zinc finger protein 771	BC145524|Zfp771|244216|zinc finger protein 771
mm9_v1_chr10_-_77632399_77632581	0.330299	HIF1A.p2	BC013475|D10Jhu81e|28295|DNA segment, Chr 10, Johns Hopkins University 81 expressed	AK003866|D10Jhu81e|28295|DNA segment, Chr 10, Johns Hopkins University 81 expressed	NM_138601|D10Jhu81e|28295|DNA segment, Chr 10, Johns Hopkins University 81 expressed
mm9_v1_chr16_+_52031661_52031695	0.330285	HIF1A.p2	NM_001033238|Cblb|208650|Casitas B-lineage lymphoma b	AK147367|Cblb|208650|Casitas B-lineage lymphoma b
mm9_v1_chr19_-_38199267_38199278	0.328849	HIF1A.p2	BC031809|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr11_+_88860710_88860807	0.32851	HIF1A.p2	AK169562|Trim25|217069|tripartite motif-containing 25	NM_009546|Trim25|217069|tripartite motif-containing 25	AK154533|Trim25|217069|tripartite motif-containing 25	BC006908|Trim25|217069|tripartite motif-containing 25	BC034276|Trim25|217069|tripartite motif-containing 25	AK160898|Trim25|217069|tripartite motif-containing 25	AK172555|Trim25|217069|tripartite motif-containing 25	D63902|Trim25|217069|tripartite motif-containing 25
mm9_v1_chr3_+_87775081_87775219	0.325839	HIF1A.p2	AK009706|Nes|18008|nestin	S78708|Nes|18008|nestin
mm9_v1_chr2_+_91551067_91551117	0.321428	HIF1A.p2	AK147045|Harbi1|241547|harbinger transposase derived 1	AK084226|Harbi1|241547|harbinger transposase derived 1	AK080671|Harbi1|241547|harbinger transposase derived 1	BC094315|Harbi1|241547|harbinger transposase derived 1	NM_178724|Harbi1|241547|harbinger transposase derived 1	AK045343|Harbi1|241547|harbinger transposase derived 1
mm9_v1_chr11_-_60034046_60034130	0.319819	HIF1A.p2	AK154424|Srebf1|20787|sterol regulatory element binding transcription factor 1	BC056922|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK150052|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK052628|Srebf1|20787|sterol regulatory element binding transcription factor 1	AK169607|Srebf1|20787|sterol regulatory element binding transcription factor 1	NM_011480|Srebf1|20787|sterol regulatory element binding transcription factor 1
mm9_v1_chr10_+_39451923_39451975	0.319225	HIF1A.p2	AK032532|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	BC048946|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	AB031049|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)	NM_011264|Rev3l|19714|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm9_v1_chr11_+_120645606_120645625	0.3192	HIF1A.p2	BC103782|Gps1|209318|G protein pathway suppressor 1
mm9_v1_chr9_-_20896404_20896431	0.318561	HIF1A.p2	BC108392|Raver1|71766|ribonucleoprotein, PTB-binding 1	BC058271|Raver1|71766|ribonucleoprotein, PTB-binding 1	NM_027911|Raver1|71766|ribonucleoprotein, PTB-binding 1
mm9_v1_chr1_+_63223728_63223739	0.317937	HIF1A.p2	AF029844|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr11_+_4537719_4537795	0.317808	HIF1A.p2	AK051387|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK048876|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	AK148105|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	BC013537|Ascc2|75452|activating signal cointegrator 1 complex subunit 2	NM_029291|Ascc2|75452|activating signal cointegrator 1 complex subunit 2
mm9_v1_chr10_+_53316720_53316974	0.316045	HIF1A.p2	AK010210|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	NM_025541|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK012376|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK031513|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK088618|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK007804|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC027628|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm9_v1_chr17_-_10512217_10512250	0.31571	HIF1A.p2	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr10_-_70622370_70622639	0.315646	HIF1A.p2	AF319464|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	BC111523|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	NM_031397|Bicc1|83675|bicaudal C homolog 1 (Drosophila)	AK076154|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr11_+_98543871_98543951	0.314367	HIF1A.p2	AK031366|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145467|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145488|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164593|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK169690|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166714|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167005|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164333|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166683|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK089933|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167285|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK077252|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK165520|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK153505|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr2_+_113167862_113167938	0.3135	HIF1A.p2	NM_001043322|Fmn1|14260|formin 1	NM_010230|Fmn1|14260|formin 1	AK135758|Fmn1|14260|formin 1	X53599|Fmn1|14260|formin 1
mm9_v1_chr3_-_9833502_9833678	0.311422	HIF1A.p2	BC145328|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145761|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	BC145763|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK172106|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156986|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK040230|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK041695|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK089329|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	AK156000|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_001195031|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1	NM_053182|Pag1|94212|phosphoprotein associated with glycosphingolipid microdomains 1
mm9_v1_chr15_-_39688931_39689018	0.310668	HIF1A.p2	AF227731|Dpys|64705|dihydropyrimidinase	BC037086|Dpys|64705|dihydropyrimidinase	AF249296|Dpys|64705|dihydropyrimidinase	AK004899|Dpys|64705|dihydropyrimidinase	AK004822|Dpys|64705|dihydropyrimidinase	NM_001164466|Dpys|64705|dihydropyrimidinase	NM_022722|Dpys|64705|dihydropyrimidinase
mm9_v1_chr11_+_80022573_80022582	0.309746	HIF1A.p2	BC046785|Rhot1|59040|ras homolog gene family, member T1	AK147749|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr16_-_78576873_78576891	0.308618	HIF1A.p2	AK005829|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed	BC019957|D16Ertd472e|67102|DNA segment, Chr 16, ERATO Doi 472, expressed
mm9_v1_chr13_+_68721096_68721152	0.30784	HIF1A.p2	AK009264|Fastkd3|69577|FAST kinase domains 3	AK033189|Fastkd3|69577|FAST kinase domains 3	NM_027123|Fastkd3|69577|FAST kinase domains 3	AK148902|Fastkd3|69577|FAST kinase domains 3	AK031142|Fastkd3|69577|FAST kinase domains 3	AK032530|Fastkd3|69577|FAST kinase domains 3	AK036778|Fastkd3|69577|FAST kinase domains 3	BC042506|Fastkd3|69577|FAST kinase domains 3	BC060688|Fastkd3|69577|FAST kinase domains 3
mm9_v1_chr1_+_158240855_158240930	0.307765	HIF1A.p2	AY050309|Nphs2|170484|nephrosis 2 homolog, podocin (human)	AK052746|Nphs2|170484|nephrosis 2 homolog, podocin (human)	FJ715770|Nphs2|170484|nephrosis 2 homolog, podocin (human)	FJ715771|Nphs2|170484|nephrosis 2 homolog, podocin (human)	FJ715772|Nphs2|170484|nephrosis 2 homolog, podocin (human)	FJ715773|Nphs2|170484|nephrosis 2 homolog, podocin (human)	FJ715774|Nphs2|170484|nephrosis 2 homolog, podocin (human)	FJ715775|Nphs2|170484|nephrosis 2 homolog, podocin (human)	FJ715776|Nphs2|170484|nephrosis 2 homolog, podocin (human)	BC067401|Nphs2|170484|nephrosis 2 homolog, podocin (human)	NM_130456|Nphs2|170484|nephrosis 2 homolog, podocin (human)	AJ302048|Nphs2|170484|nephrosis 2 homolog, podocin (human)
mm9_v1_chr11_+_80022611_80022825	0.30757	HIF1A.p2	AK028597|Rhot1|59040|ras homolog gene family, member T1	AK078955|Rhot1|59040|ras homolog gene family, member T1	AK138830|Rhot1|59040|ras homolog gene family, member T1	AK041119|Rhot1|59040|ras homolog gene family, member T1	BC055823|Rhot1|59040|ras homolog gene family, member T1	BC058350|Rhot1|59040|ras homolog gene family, member T1	AK053263|Rhot1|59040|ras homolog gene family, member T1	AK043323|Rhot1|59040|ras homolog gene family, member T1	AK141621|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr5_+_115461532_115461532	0.307042	HIF1A.p2	NM_029012|Sppl3|74585|signal peptide peptidase 3
mm9_v1_chr2_+_147190829_147190932	0.306701	HIF1A.p2	BC140989|Pax1|18503|paired box gene 1
mm9_v1_chr17_-_32421025_32421067	0.305774	HIF1A.p2	BC082782|Brd4|57261|bromodomain containing 4	AK147545|Brd4|57261|bromodomain containing 4	BC138835|Brd4|57261|bromodomain containing 4	BC138834|Brd4|57261|bromodomain containing 4	AF461395|Brd4|57261|bromodomain containing 4	AF461396|Brd4|57261|bromodomain containing 4	NM_020508|Brd4|57261|bromodomain containing 4	NM_198094|Brd4|57261|bromodomain containing 4
mm9_v1_chr14_+_32898913_32898957	0.305521	HIF1A.p2	AK139884|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1	NM_145460|Oxnad1|218885|oxidoreductase NAD-binding domain containing 1
mm9_v1_chr7_+_13507659_13507740	0.304143	HIF1A.p2	NM_009095|Rps5|20103|ribosomal protein S5	AK002235|Rps5|20103|ribosomal protein S5	AK009663|Rps5|20103|ribosomal protein S5	AK010681|Rps5|20103|ribosomal protein S5	AK012424|Rps5|20103|ribosomal protein S5	AK012481|Rps5|20103|ribosomal protein S5	AK020754|Rps5|20103|ribosomal protein S5	AK050611|Rps5|20103|ribosomal protein S5	AK050622|Rps5|20103|ribosomal protein S5	AK152449|Rps5|20103|ribosomal protein S5	AK160552|Rps5|20103|ribosomal protein S5	AK164079|Rps5|20103|ribosomal protein S5	AK167533|Rps5|20103|ribosomal protein S5	AK168044|Rps5|20103|ribosomal protein S5	AK169016|Rps5|20103|ribosomal protein S5	AK172446|Rps5|20103|ribosomal protein S5	AK020477|Rps5|20103|ribosomal protein S5	AK168106|Rps5|20103|ribosomal protein S5	BC058690|Rps5|20103|ribosomal protein S5	U78085|Rps5|20103|ribosomal protein S5	BC020401|Rps5|20103|ribosomal protein S5	Y12431|Rps5|20103|ribosomal protein S5
mm9_v1_chr10_-_53795556_53795601	0.303845	HIF1A.p2	AK031038|Man1a|17155|mannosidase 1, alpha	NM_008548|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr1_+_121422719_121422789	0.3033	HIF1A.p2	AK031130|Tmem185b|226351|transmembrane protein 185B	BC020408|Tmem185b|226351|transmembrane protein 185B	BC024712|Tmem185b|226351|transmembrane protein 185B	NM_146103|Tmem185b|226351|transmembrane protein 185B
mm9_v1_chr11_-_11937330_11937512	0.303179	HIF1A.p2	AK030727|Grb10|14783|growth factor receptor bound protein 10	BC053842|Grb10|14783|growth factor receptor bound protein 10	AF022072|Grb10|14783|growth factor receptor bound protein 10	AK012646|Grb10|14783|growth factor receptor bound protein 10	AK163841|Grb10|14783|growth factor receptor bound protein 10	AK032927|Grb10|14783|growth factor receptor bound protein 10	NM_010345|Grb10|14783|growth factor receptor bound protein 10	FJ425892|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr5_+_139676589_139676634	0.302425	HIF1A.p2	AK014585|Sun1|77053|Sad1 and UNC84 domain containing 1	AK036187|Sun1|77053|Sad1 and UNC84 domain containing 1	AK161959|Sun1|77053|Sad1 and UNC84 domain containing 1	AK162533|Sun1|77053|Sad1 and UNC84 domain containing 1	AK167686|Sun1|77053|Sad1 and UNC84 domain containing 1	BC048156|Sun1|77053|Sad1 and UNC84 domain containing 1	BC047928|Sun1|77053|Sad1 and UNC84 domain containing 1	NM_024451|Sun1|77053|Sad1 and UNC84 domain containing 1	AK160281|Sun1|77053|Sad1 and UNC84 domain containing 1
mm9_v1_chr14_+_122874598_122874609	0.302052	HIF1A.p2	AK051032|Zic2|22772|zinc finger protein of the cerebellum 2	NM_009574|Zic2|22772|zinc finger protein of the cerebellum 2
mm9_v1_chr17_-_48061354_48061450	0.301821	HIF1A.p2	BC043702|Foxp4|74123|forkhead box P4	AY135029|Foxp4|74123|forkhead box P4	BC052407|Foxp4|74123|forkhead box P4	AK004693|Foxp4|74123|forkhead box P4	AB052766|Foxp4|74123|forkhead box P4	BC023368|Foxp4|74123|forkhead box P4	AK143194|Foxp4|74123|forkhead box P4
mm9_v1_chr10_+_110910277_110910391	0.301601	HIF1A.p2	AK004633|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK007322|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK136161|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK032896|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK145766|Nap1l1|53605|nucleosome assembly protein 1-like 1	D12618|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK169301|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK152011|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK153531|Nap1l1|53605|nucleosome assembly protein 1-like 1	AK008261|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr3_+_96439541_96439607	0.301427	HIF1A.p2	AK011709|Pex11b|18632|peroxisomal biogenesis factor 11 beta	AK082279|Pex11b|18632|peroxisomal biogenesis factor 11 beta	AK005236|Pex11b|18632|peroxisomal biogenesis factor 11 beta	BC013812|Pex11b|18632|peroxisomal biogenesis factor 11 beta	BC054414|Pex11b|18632|peroxisomal biogenesis factor 11 beta	AF093671|Pex11b|18632|peroxisomal biogenesis factor 11 beta
mm9_v1_chr14_+_31528800_31528932	0.301248	HIF1A.p2	AK154826|Sfmbt1|54650|Scm-like with four mbt domains 1	NM_001166532|Sfmbt1|54650|Scm-like with four mbt domains 1	BC036972|Sfmbt1|54650|Scm-like with four mbt domains 1	AK142330|Sfmbt1|54650|Scm-like with four mbt domains 1	BC018217|Sfmbt1|54650|Scm-like with four mbt domains 1
mm9_v1_chr5_-_149862867_149863025	0.301074	HIF1A.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr15_-_36212878_36212891	0.300637	HIF1A.p2	AK147768|Rnf19a|30945|ring finger protein 19A	AK166197|Rnf19a|30945|ring finger protein 19A
mm9_v1_chrX_-_72661877_72661890	0.299528	HIF1A.p2	NM_001039373|Mtcp1|17763|mature T-cell proliferation 1	NM_010839|Mtcp1|17763|mature T-cell proliferation 1	U32332|Mtcp1|17763|mature T-cell proliferation 1	Z35294|Mtcp1|17763|mature T-cell proliferation 1
mm9_v1_chr8_-_123158281_123158309	0.297174	HIF1A.p2	BC027666|1190005I06Rik|68918|RIKEN cDNA 1190005I06 gene	NM_197988|1190005I06Rik|68918|RIKEN cDNA 1190005I06 gene
mm9_v1_chr2_-_118982691_118982711	0.296265	HIF1A.p2	AK004786|Fam82a2|67809|family with sequence similarity 82, member A2
mm9_v1_chr15_+_101004502_101004580	0.290629	HIF1A.p2	BC145775|Acvr1b|11479|activin A receptor, type 1B	BC145777|Acvr1b|11479|activin A receptor, type 1B	AK154578|Acvr1b|11479|activin A receptor, type 1B	AK157910|Acvr1b|11479|activin A receptor, type 1B	NM_007395|Acvr1b|11479|activin A receptor, type 1B	BC059832|Acvr1b|11479|activin A receptor, type 1B	Z31663|Acvr1b|11479|activin A receptor, type 1B
mm9_v1_chr10_+_119645800_119645892	0.289109	HIF1A.p2	BC027637|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK039270|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK153442|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK162942|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK006207|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	NM_026617|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4
mm9_v1_chr8_+_90642636_90642724	0.288537	HIF1A.p2	NM_029074|Tmem188|382030|transmembrane protein 188	AK146578|Tmem188|382030|transmembrane protein 188	BC018498|Tmem188|382030|transmembrane protein 188	AK017198|Tmem188|382030|transmembrane protein 188	BC094385|Tmem188|382030|transmembrane protein 188	BC118981|Tmem188|382030|transmembrane protein 188	BC148291|Tmem188|382030|transmembrane protein 188
mm9_v1_chr5_+_136254474_136254576	0.288456	HIF1A.p2	AK002305|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	AK135162|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	BC023482|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	NM_008617|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	AK160553|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	AK167809|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	M16229|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)
mm9_v1_chr8_-_123158229_123158270	0.287898	HIF1A.p2	AK004494|1190005I06Rik|68918|RIKEN cDNA 1190005I06 gene
mm9_v1_chr1_+_74818463_74818531	0.286578	HIF1A.p2	AK133954|Wnt6|22420|wingless-related MMTV integration site 6	NM_009526|Wnt6|22420|wingless-related MMTV integration site 6	BC048700|Wnt6|22420|wingless-related MMTV integration site 6
mm9_v1_chr18_-_24762236_24762282	0.286442	HIF1A.p2	AK028976|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr9_+_121669121_121669172	0.28547	HIF1A.p2	NM_001166644|Zfp651|270210|zinc finger protein 651
mm9_v1_chr8_+_97541591_97541631	0.285003	HIF1A.p2	NM_173036|Gpr97|54672|G protein-coupled receptor 97	AK154648|Gpr97|54672|G protein-coupled receptor 97	AK155164|Gpr97|54672|G protein-coupled receptor 97	BC064726|Gpr97|54672|G protein-coupled receptor 97
mm9_v1_chr7_+_3655602_3655652	0.283245	HIF1A.p2	AK081889|Rps9|76846|ribosomal protein S9	AK151621|Rps9|76846|ribosomal protein S9	AK050591|Rps9|76846|ribosomal protein S9	AK150988|Rps9|76846|ribosomal protein S9	NM_029767|Rps9|76846|ribosomal protein S9	AK151029|Rps9|76846|ribosomal protein S9	AK150800|Rps9|76846|ribosomal protein S9	BC031746|Rps9|76846|ribosomal protein S9
mm9_v1_chr7_+_117265568_117265624	0.28272	HIF1A.p2	NM_009516|Wee1|22390|WEE 1 homolog 1 (S. pombe)	BC006852|Wee1|22390|WEE 1 homolog 1 (S. pombe)	D30743|Wee1|22390|WEE 1 homolog 1 (S. pombe)
mm9_v1_chr9_+_118835589_118835685	0.282662	HIF1A.p2	AJ344340|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	AK013115|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	NM_133710|Ctdspl|69274|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm9_v1_chr3_+_87774988_87775050	0.282409	HIF1A.p2	AK031207|Nes|18008|nestin	AK012622|Nes|18008|nestin	BC062893|Nes|18008|nestin	NM_016701|Nes|18008|nestin	BC060693|Nes|18008|nestin	AF076623|Nes|18008|nestin
mm9_v1_chr8_+_3676454_3676539	0.282254	HIF1A.p2	AK076212|Trappc5|66682|trafficking protein particle complex 5	NM_025701|Trappc5|66682|trafficking protein particle complex 5	AK003633|Trappc5|66682|trafficking protein particle complex 5	AK007989|Trappc5|66682|trafficking protein particle complex 5	AK171833|Trappc5|66682|trafficking protein particle complex 5	AK078451|Trappc5|66682|trafficking protein particle complex 5	BC049179|Trappc5|66682|trafficking protein particle complex 5
mm9_v1_chr10_-_41996462_41996560	0.281779	HIF1A.p2	AK047413|Foxo3|56484|forkhead box O3	AK139629|Foxo3|56484|forkhead box O3	AF114259|Foxo3|56484|forkhead box O3	NM_019740|Foxo3|56484|forkhead box O3	AK143198|Foxo3|56484|forkhead box O3
mm9_v1_chr11_-_23397858_23397918	0.280452	HIF1A.p2	BC064012|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	BC055873|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
mm9_v1_chr15_+_76734500_76734541	0.280315	HIF1A.p2	NM_012053|Rpl8|26961|ribosomal protein L8	AK152063|Rpl8|26961|ribosomal protein L8	AK131970|Rpl8|26961|ribosomal protein L8	AK088263|Rpl8|26961|ribosomal protein L8	AK145498|Rpl8|26961|ribosomal protein L8	AK146330|Rpl8|26961|ribosomal protein L8	AK151408|Rpl8|26961|ribosomal protein L8	AK167775|Rpl8|26961|ribosomal protein L8	AK168332|Rpl8|26961|ribosomal protein L8	AK168769|Rpl8|26961|ribosomal protein L8	U67771|Rpl8|26961|ribosomal protein L8
mm9_v1_chr11_+_120645560_120645605	0.280296	HIF1A.p2	NM_001177874|Gps1|209318|G protein pathway suppressor 1	AK088490|Gps1|209318|G protein pathway suppressor 1
mm9_v1_chr17_-_34257327_34257355	0.279751	HIF1A.p2	NM_001025387|Brd2|14312|bromodomain containing 2	BC085251|Brd2|14312|bromodomain containing 2
mm9_v1_chr9_+_77765170_77765271	0.279564	HIF1A.p2	AK031743|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK162451|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	NM_134255|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK051580|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK045274|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085663|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK085696|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK028761|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK167755|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168360|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK088153|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	AK168987|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)	BC022911|Elovl5|68801|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm9_v1_chr15_+_58247016_58247063	0.276312	HIF1A.p2	AK137324|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	NM_145959|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	BC070426|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr5_-_138086925_138086941	0.275867	HIF1A.p2	AK040947|Irs3|16369|insulin receptor substrate 3	AK030311|Irs3|16369|insulin receptor substrate 3	NM_010571|Irs3|16369|insulin receptor substrate 3
mm9_v1_chr2_+_80479420_80479420	0.275553	HIF1A.p2	NM_001190179|Nup35|69482|nucleoporin 35
mm9_v1_chr9_-_36604816_36604957	0.273903	HIF1A.p2	AK147776|Ei24|13663|etoposide induced 2.4 mRNA	AK159927|Ei24|13663|etoposide induced 2.4 mRNA	AK145018|Ei24|13663|etoposide induced 2.4 mRNA	AK172233|Ei24|13663|etoposide induced 2.4 mRNA
mm9_v1_chr12_-_70993995_70994059	0.270173	HIF1A.p2	AK019468|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	BC040381|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK032123|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr18_-_35814841_35814887	0.269463	HIF1A.p2	AK146021|Gm1614|381148|predicted gene 1614
mm9_v1_chr15_-_36212893_36212934	0.266232	HIF1A.p2	NM_013923|Rnf19a|30945|ring finger protein 19A
mm9_v1_chr3_+_144233654_144233696	0.266199	HIF1A.p2	AK159085|Sep15|93684|selenoprotein	BC019792|Sep15|93684|selenoprotein	AK020419|Sep15|93684|selenoprotein	AK159353|Sep15|93684|selenoprotein
mm9_v1_chr19_+_4148636_4148721	0.264226	HIF1A.p2	AK149639|Coro1b|23789|coronin, actin binding protein 1B	AF143956|Coro1b|23789|coronin, actin binding protein 1B	NM_011778|Coro1b|23789|coronin, actin binding protein 1B	BC029326|Coro1b|23789|coronin, actin binding protein 1B	BC131944|Coro1b|23789|coronin, actin binding protein 1B	BC132617|Coro1b|23789|coronin, actin binding protein 1B
mm9_v1_chr8_+_127386922_127387009	0.263609	HIF1A.p2	NM_010322|Gnpat|14712|glyceronephosphate O-acyltransferase	AK004771|Gnpat|14712|glyceronephosphate O-acyltransferase	AK010896|Gnpat|14712|glyceronephosphate O-acyltransferase	AK004630|Gnpat|14712|glyceronephosphate O-acyltransferase	AK166997|Gnpat|14712|glyceronephosphate O-acyltransferase	AF110769|Gnpat|14712|glyceronephosphate O-acyltransferase	BC003225|Gnpat|14712|glyceronephosphate O-acyltransferase	AK150810|Gnpat|14712|glyceronephosphate O-acyltransferase	BC025972|Gnpat|14712|glyceronephosphate O-acyltransferase
mm9_v1_chr4_+_132796732_132796805	0.263319	HIF1A.p2	AB021861|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6	NM_016693|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6	BC120565|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6	BC125577|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6
mm9_v1_chr2_+_112106470_112106612	0.263061	HIF1A.p2	BC062099|Slc12a6|107723|solute carrier family 12, member 6	NM_133649|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr4_-_134409254_134409295	0.262766	HIF1A.p2	AY846873|Tmem57|66146|transmembrane protein 57	AY846874|Tmem57|66146|transmembrane protein 57	NM_025382|Tmem57|66146|transmembrane protein 57
mm9_v1_chr1_-_33871261_33871282	0.261336	HIF1A.p2	AK122541|Zfp451|98403|zinc finger protein 451	BC019546|Zfp451|98403|zinc finger protein 451	AK030088|Zfp451|98403|zinc finger protein 451	NM_133817|Zfp451|98403|zinc finger protein 451
mm9_v1_chr9_+_77602377_77602381	0.258841	HIF1A.p2	AK169676|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr8_+_71317827_71317912	0.258608	HIF1A.p2	AK040574|Ints10|70885|integrator complex subunit 10	AK047093|Ints10|70885|integrator complex subunit 10	AK014939|Ints10|70885|integrator complex subunit 10	NM_027590|Ints10|70885|integrator complex subunit 10	AK147743|Ints10|70885|integrator complex subunit 10	AK169819|Ints10|70885|integrator complex subunit 10	AK030974|Ints10|70885|integrator complex subunit 10	BC031923|Ints10|70885|integrator complex subunit 10	AK083331|Ints10|70885|integrator complex subunit 10	AK034498|Ints10|70885|integrator complex subunit 10
mm9_v1_chr5_-_65782632_65782676	0.258218	HIF1A.p2	AK168326|Rpl9|20005|ribosomal protein L9	AK017388|Rpl9|20005|ribosomal protein L9	AK053431|Rpl9|20005|ribosomal protein L9	AK169217|Rpl9|20005|ribosomal protein L9	BC086937|Rpl9|20005|ribosomal protein L9	AK012331|Rpl9|20005|ribosomal protein L9	AK012445|Rpl9|20005|ribosomal protein L9	AK017427|Rpl9|20005|ribosomal protein L9	AK084278|Rpl9|20005|ribosomal protein L9	AK088166|Rpl9|20005|ribosomal protein L9	AK153562|Rpl9|20005|ribosomal protein L9	AK159980|Rpl9|20005|ribosomal protein L9	NM_011292|Rpl9|20005|ribosomal protein L9
mm9_v1_chr2_-_180377395_180377395	0.254734	HIF1A.p2	BC108399|Tcfl5|277353|transcription factor-like 5 (basic helix-loop-helix)	NM_178254|Tcfl5|277353|transcription factor-like 5 (basic helix-loop-helix)
mm9_v1_chr5_-_3596078_3596116	0.254022	HIF1A.p2	AK047811|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene	AK041876|C030048B08Rik|269623|RIKEN cDNA C030048B08 gene
mm9_v1_chr10_+_42894504_42894509	0.253248	HIF1A.p2	AK018547|9030612E09Rik|74530|RIKEN cDNA 9030612E09 gene	AK029173|9030612E09Rik|74530|RIKEN cDNA 9030612E09 gene	NM_172419|9030612E09Rik|74530|RIKEN cDNA 9030612E09 gene
mm9_v1_chr19_+_8972532_8972606	0.252514	HIF1A.p2	AK028655|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK030722|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK081915|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK149686|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC094437|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC117889|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	NM_008060|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	U92793|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	AK043606|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC128069|Ganab|14376|alpha glucosidase 2 alpha neutral subunit	BC117888|Ganab|14376|alpha glucosidase 2 alpha neutral subunit
mm9_v1_chr19_+_8972607_8972625	0.252094	HIF1A.p2	AK166150|Ganab|14376|alpha glucosidase 2 alpha neutral subunit
mm9_v1_chr11_-_77979070_77979090	0.250723	HIF1A.p2	AK046015|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr12_+_16901671_16901783	0.248641	HIF1A.p2	NM_009072|Rock2|19878|Rho-associated coiled-coil containing protein kinase 2
mm9_v1_chr16_+_13109993_13110037	0.247404	HIF1A.p2	AK149326|Ercc4|50505|excision repair cross-complementing rodent repair deficiency, complementation group 4	AK018375|Ercc4|50505|excision repair cross-complementing rodent repair deficiency, complementation group 4	AK043366|Ercc4|50505|excision repair cross-complementing rodent repair deficiency, complementation group 4	AK138588|Ercc4|50505|excision repair cross-complementing rodent repair deficiency, complementation group 4	BC026792|Ercc4|50505|excision repair cross-complementing rodent repair deficiency, complementation group 4
mm9_v1_chr9_-_20682520_20682531	0.245278	HIF1A.p2	AK018113|Angptl6|70726|angiopoietin-like 6
mm9_v1_chr11_+_77992224_77992267	0.243654	HIF1A.p2	AK002265|Tlcd1|68385|TLC domain containing 1	AK161721|Tlcd1|68385|TLC domain containing 1	AK002703|Tlcd1|68385|TLC domain containing 1	BC005702|Tlcd1|68385|TLC domain containing 1	NM_026708|Tlcd1|68385|TLC domain containing 1
mm9_v1_chr7_+_71432538_71432641	0.243003	HIF1A.p2	AK088715|Mtmr10|233315|myotubularin related protein 10	NM_172742|Mtmr10|233315|myotubularin related protein 10	BC041672|Mtmr10|233315|myotubularin related protein 10
mm9_v1_chr15_+_83002779_83002785	0.237799	HIF1A.p2	AK033475|7530414M10Rik|320374|RIKEN cDNA 7530414M10 gene	AK034072|7530414M10Rik|320374|RIKEN cDNA 7530414M10 gene
mm9_v1_chr1_+_91351435_91351522	0.237774	HIF1A.p2	BC096588|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr10_+_25079661_25079716	0.23759	HIF1A.p2	AK170275|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK167434|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	BC023768|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK052475|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr2_-_90744808_90744892	0.236616	HIF1A.p2	AK160888|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC027270|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119267|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	BC119269|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK002501|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	AK088337|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3	NM_026688|Ndufs3|68349|NADH dehydrogenase (ubiquinone) Fe-S protein 3
mm9_v1_chr19_+_29326204_29326359	0.236011	HIF1A.p2	NM_001048177|Jak2|16452|Janus kinase 2	NM_008413|Jak2|16452|Janus kinase 2	AK087255|Jak2|16452|Janus kinase 2
mm9_v1_chr10_-_26094990_26095024	0.235577	HIF1A.p2	AK045667|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	NM_172787|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK049597|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr2_+_152579905_152579917	0.23554	HIF1A.p2	AF271382|Cox4i2|84682|cytochrome c oxidase subunit IV isoform 2	NM_053091|Cox4i2|84682|cytochrome c oxidase subunit IV isoform 2
mm9_v1_chr17_-_24346280_24346475	0.235029	HIF1A.p2	BC094362|Ntn3|18209|netrin 3	NM_010947|Ntn3|18209|netrin 3	AK083904|Ntn3|18209|netrin 3	BC053038|Ntn3|18209|netrin 3	AK031199|Ntn3|18209|netrin 3
mm9_v1_chr2_-_114027142_114027208	0.233972	HIF1A.p2	AK164226|Zfp770|228491|zinc finger protein 770	AK032578|Zfp770|228491|zinc finger protein 770	AK077547|Zfp770|228491|zinc finger protein 770	NM_175466|Zfp770|228491|zinc finger protein 770	AK044261|Zfp770|228491|zinc finger protein 770	AK043843|Zfp770|228491|zinc finger protein 770
mm9_v1_chr14_-_104867215_104867215	0.233602	HIF1A.p2	AY706205|Pou4f1|18996|POU domain, class 4, transcription factor 1	NM_011143|Pou4f1|18996|POU domain, class 4, transcription factor 1
mm9_v1_chr11_-_87800799_87801034	0.232224	HIF1A.p2	AK028319|Dynll2|68097|dynein light chain LC8-type 2	BC011289|Dynll2|68097|dynein light chain LC8-type 2	BC058797|Dynll2|68097|dynein light chain LC8-type 2	BC040822|Dynll2|68097|dynein light chain LC8-type 2	AK011284|Dynll2|68097|dynein light chain LC8-type 2	AK160114|Dynll2|68097|dynein light chain LC8-type 2	AK049645|Dynll2|68097|dynein light chain LC8-type 2	AK078434|Dynll2|68097|dynein light chain LC8-type 2	AK169212|Dynll2|68097|dynein light chain LC8-type 2	NM_026556|Dynll2|68097|dynein light chain LC8-type 2
mm9_v1_chr4_-_149112082_149112163	0.230848	HIF1A.p2	AK079157|Tmem201|230917|transmembrane protein 201	AK078532|Tmem201|230917|transmembrane protein 201	AK039221|Tmem201|230917|transmembrane protein 201	BC072645|Tmem201|230917|transmembrane protein 201	NM_001025106|Tmem201|230917|transmembrane protein 201	NM_177672|Tmem201|230917|transmembrane protein 201	AK086543|Tmem201|230917|transmembrane protein 201	AK153631|Tmem201|230917|transmembrane protein 201
mm9_v1_chr5_-_28117963_28118089	0.230625	HIF1A.p2	AF104261|Paxip1|55982|PAX interacting (with transcription-activation domain) protein 1
mm9_v1_chr7_-_36587975_36588025	0.230154	HIF1A.p2	AK129283|Zfp507|668501|zinc finger protein 507	BC050041|Zfp507|668501|zinc finger protein 507	AK142141|Zfp507|668501|zinc finger protein 507	NM_177739|Zfp507|668501|zinc finger protein 507	AK172290|E130304I02Rik|78547|RIKEN cDNA E130304I02 gene
mm9_v1_chr11_-_62270815_62270835	0.230136	HIF1A.p2	AK035813|Ncor1|20185|nuclear receptor co-repressor 1	AK077420|Ncor1|20185|nuclear receptor co-repressor 1	NM_011308|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr11_+_59120429_59120467	0.229085	HIF1A.p2	AK087490|Wnt9a|216795|wingless-type MMTV integration site 9A	NM_139298|Wnt9a|216795|wingless-type MMTV integration site 9A	BC066165|Wnt9a|216795|wingless-type MMTV integration site 9A	AB072311|Wnt9a|216795|wingless-type MMTV integration site 9A
mm9_v1_chr4_+_129190872_129190875	0.228252	HIF1A.p2	AK083913|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr5_+_20930720_20930881	0.227769	HIF1A.p2	NM_177869|Fam185a|330050|family with sequence similarity 185, member A	AK030922|Fam185a|330050|family with sequence similarity 185, member A	AK076256|Fam185a|330050|family with sequence similarity 185, member A	BC055342|Fam185a|330050|family with sequence similarity 185, member A
mm9_v1_chr2_+_25188246_25188306	0.226575	HIF1A.p2	NM_001029983|Man1b1|227619|mannosidase, alpha, class 1B, member 1	AK043541|Man1b1|227619|mannosidase, alpha, class 1B, member 1	BC138550|Man1b1|227619|mannosidase, alpha, class 1B, member 1	BC138551|Man1b1|227619|mannosidase, alpha, class 1B, member 1
mm9_v1_chr12_-_70993825_70993856	0.226048	HIF1A.p2	AK084891|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr9_-_106150060_106150202	0.225887	HIF1A.p2	AK133283|Alas1|11655|aminolevulinic acid synthase 1	BC022110|Alas1|11655|aminolevulinic acid synthase 1
mm9_v1_chr5_-_31210054_31210143	0.224855	HIF1A.p2	BC082316|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002453|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK005413|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK009384|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK010297|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	NM_001134692|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	BC002177|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK019285|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK002224|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)	AK003569|Ost4|67695|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm9_v1_chr17_-_53828547_53828590	0.224526	HIF1A.p2	AB193067|Sgol1|72415|shugoshin-like 1 (S. pombe)	AB193068|Sgol1|72415|shugoshin-like 1 (S. pombe)	AK196456|Sgol1|72415|shugoshin-like 1 (S. pombe)
mm9_v1_chr15_-_57723937_57723989	0.222054	HIF1A.p2	AK152901|Derl1|67819|Der1-like domain family, member 1	AK148018|Derl1|67819|Der1-like domain family, member 1	AK152197|Derl1|67819|Der1-like domain family, member 1	AK043420|Derl1|67819|Der1-like domain family, member 1	NM_024207|Derl1|67819|Der1-like domain family, member 1	AK007435|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr1_+_95375503_95375639	0.221503	HIF1A.p2	NM_001159717|Sept2|18000|septin 2	NM_001159718|Sept2|18000|septin 2	NM_010891|Sept2|18000|septin 2	AK146616|Sept2|18000|septin 2	AK151591|Sept2|18000|septin 2	AK028072|Sept2|18000|septin 2	AK171331|Sept2|18000|septin 2	D49382|Sept2|18000|septin 2	NM_001159719|Sept2|18000|septin 2
mm9_v1_chr7_-_117987867_117987920	0.220667	HIF1A.p2	BC096563|Rnf141|67150|ring finger protein 141	AK011839|Rnf141|67150|ring finger protein 141	BC018553|Rnf141|67150|ring finger protein 141	AK015505|Rnf141|67150|ring finger protein 141	NM_025999|Rnf141|67150|ring finger protein 141	AF353167|Rnf141|67150|ring finger protein 141	AK154417|Rnf141|67150|ring finger protein 141
mm9_v1_chr11_-_97561650_97561666	0.220382	HIF1A.p2	D90085|Pcgf2|22658|polycomb group ring finger 2
mm9_v1_chr7_-_139791248_139791319	0.219532	HIF1A.p2	BC139757|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222444|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF222445|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223361|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223362|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223363|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223674|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	AF223675|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)	NM_009123|Nkx1-2|20231|NK1 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr3_+_32607424_32607471	0.219313	HIF1A.p2	NM_019673|Actl6a|56456|actin-like 6A	AK013221|Actl6a|56456|actin-like 6A
mm9_v1_chr8_+_131209533_131209569	0.218921	HIF1A.p2	NM_010578|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr7_+_99710002_99710070	0.218571	HIF1A.p2	AK160230|Ccdc90b|66365|coiled-coil domain containing 90B	AK084673|Ccdc90b|66365|coiled-coil domain containing 90B	AK009370|Ccdc90b|66365|coiled-coil domain containing 90B	BC115973|Ccdc90b|66365|coiled-coil domain containing 90B
mm9_v1_chr15_+_78861295_78861336	0.215551	HIF1A.p2	BC024107|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	NM_001161712|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	NM_013847|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	AK076469|Gcat|26912|glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
mm9_v1_chrX_+_54306724_54306791	0.214656	HIF1A.p2	AK012522|Htatsf1|72459|HIV TAT specific factor 1	BC037711|Htatsf1|72459|HIV TAT specific factor 1	NM_028242|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr11_-_72303447_72303476	0.213433	HIF1A.p2	AK156007|Spns2|216892|spinster homolog 2 (Drosophila)
mm9_v1_chr10_-_76880977_76881002	0.212692	HIF1A.p2	AK164931|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AK141777|Adarb1|110532|adenosine deaminase, RNA-specific, B1
mm9_v1_chr11_-_95926384_95926408	0.212501	HIF1A.p2	AK152529|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK153328|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr16_-_91044623_91044646	0.211919	HIF1A.p2	NM_026110|Gcfc1|67367|GC-rich sequence DNA-binding factor 1
mm9_v1_chr19_+_6984187_6984287	0.210725	HIF1A.p2	BC087959|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_001166370|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	NM_026306|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC016191|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr9_-_15162159_15162231	0.210093	HIF1A.p2	NM_176976|5830418K08Rik|319675|RIKEN cDNA 5830418K08 gene
mm9_v1_chr11_+_86298106_86298244	0.210066	HIF1A.p2	AK036401|Rnft1|76892|ring finger protein, transmembrane 1	NM_029788|Rnft1|76892|ring finger protein, transmembrane 1	AK171077|Rnft1|76892|ring finger protein, transmembrane 1	AK153293|Rnft1|76892|ring finger protein, transmembrane 1	BC050796|Rnft1|76892|ring finger protein, transmembrane 1	AK002624|Rnft1|76892|ring finger protein, transmembrane 1
mm9_v1_chr17_-_13185043_13185130	0.208727	HIF1A.p2	BC046416|Wtap|60532|Wilms' tumour 1-associating protein	BC047338|Wtap|60532|Wilms' tumour 1-associating protein	BC093504|Wtap|60532|Wilms' tumour 1-associating protein	NM_001113532|Wtap|60532|Wilms' tumour 1-associating protein	NM_001113533|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr4_-_155571450_155571620	0.208064	HIF1A.p2	U84407|Agrn|11603|agrin	AY914875|Agrn|11603|agrin	AF190858|Agrn|11603|agrin	AK134826|Agrn|11603|agrin
mm9_v1_chr12_+_75008853_75009062	0.207935	HIF1A.p2	NM_010431|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK034087|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK150367|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK138944|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK017853|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	BC026139|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AF003695|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr11_+_80022584_80022586	0.206678	HIF1A.p2	AK032096|Rhot1|59040|ras homolog gene family, member T1	AK054472|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr17_+_56906984_56907028	0.205886	HIF1A.p2	BC023942|Dus3l|224907|dihydrouridine synthase 3-like (S. cerevisiae)
mm9_v1_chr8_+_108384479_108384590	0.205377	HIF1A.p2	BC083165|Nutf2|68051|nuclear transport factor 2	AK152212|Nutf2|68051|nuclear transport factor 2	BC003955|Nutf2|68051|nuclear transport factor 2	NM_026532|Nutf2|68051|nuclear transport factor 2	AK020512|Nutf2|68051|nuclear transport factor 2	AK028410|Nutf2|68051|nuclear transport factor 2	AK002461|Nutf2|68051|nuclear transport factor 2	AK012500|Nutf2|68051|nuclear transport factor 2	AK051049|Nutf2|68051|nuclear transport factor 2	AK168026|Nutf2|68051|nuclear transport factor 2	BC086773|Nutf2|68051|nuclear transport factor 2
mm9_v1_chr6_+_140572347_140572427	0.202215	HIF1A.p2	BC031376|Aebp2|11569|AE binding protein 2
mm9_v1_chr9_+_77602337_77602341	0.201976	HIF1A.p2	AK143228|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	AK144339|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr18_-_58369579_58369752	0.201884	HIF1A.p2	AK132163|Fbn2|14119|fibrillin 2	NM_010181|Fbn2|14119|fibrillin 2
mm9_v1_chr11_-_120434181_120434192	0.201454	HIF1A.p2	AK168330|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK169265|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK170603|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK141304|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK146542|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK149605|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK149965|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150422|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150592|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150805|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK151546|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152141|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152217|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152791|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK152834|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK153365|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK159606|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK159729|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK159965|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK161537|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK167796|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK168612|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK168893|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	X06453|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr5_-_31262588_31262733	0.200726	HIF1A.p2	BC017527|Preb|50907|prolactin regulatory element binding	AF150808|Preb|50907|prolactin regulatory element binding	AF193017|Preb|50907|prolactin regulatory element binding	AK029838|Preb|50907|prolactin regulatory element binding	AK036866|Preb|50907|prolactin regulatory element binding	AK013330|Preb|50907|prolactin regulatory element binding	AK151288|Preb|50907|prolactin regulatory element binding	NM_016703|Preb|50907|prolactin regulatory element binding
mm9_v1_chr7_+_3581586_3581660	0.199374	HIF1A.p2	AK033190|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	NM_001159714|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	NM_027328|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK012987|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AY040823|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK005294|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	BC018376|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK033283|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK051260|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	BC061461|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	BC057877|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)	AK044457|Prpf31|68988|PRP31 pre-mRNA processing factor 31 homolog (yeast)
mm9_v1_chr11_-_120092784_120092898	0.199244	HIF1A.p2	AK034741|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK162948|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK013668|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene
mm9_v1_chr2_-_168780756_168780798	0.19923	HIF1A.p2	U49046|Zfp64|22722|zinc finger protein 64	AK012527|Zfp64|22722|zinc finger protein 64	BC004695|Zfp64|22722|zinc finger protein 64	AK146036|Zfp64|22722|zinc finger protein 64	AK010444|Zfp64|22722|zinc finger protein 64
mm9_v1_chr1_-_173211220_173211350	0.198843	HIF1A.p2	AK134341|Ppox|19044|protoporphyrinogen oxidase	AK142632|Ppox|19044|protoporphyrinogen oxidase	BC002047|Ppox|19044|protoporphyrinogen oxidase	U25114|Ppox|19044|protoporphyrinogen oxidase	NM_008911|Ppox|19044|protoporphyrinogen oxidase
mm9_v1_chr7_+_29237141_29237256	0.197446	HIF1A.p2	AK090175|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1	AK144493|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1	NM_001141921|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1
mm9_v1_chr19_-_4615661_4615689	0.197036	HIF1A.p2	NM_153388|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr14_-_64127928_64127993	0.196779	HIF1A.p2	BC058860|Tdh|58865|L-threonine dehydrogenase	NM_021480|Tdh|58865|L-threonine dehydrogenase
mm9_v1_chr19_+_7492081_7492131	0.19649	HIF1A.p2	NM_175381|2700081O15Rik|108899|RIKEN cDNA 2700081O15 gene
mm9_v1_chr11_-_120209770_120209811	0.196065	HIF1A.p2	M21495|Actg1|11465|actin, gamma, cytoplasmic 1	BC099371|Actg1|11465|actin, gamma, cytoplasmic 1	BC003337|Actg1|11465|actin, gamma, cytoplasmic 1	BC018571|Actg1|11465|actin, gamma, cytoplasmic 1	BC021796|Actg1|11465|actin, gamma, cytoplasmic 1	BC023248|Actg1|11465|actin, gamma, cytoplasmic 1	NM_009609|Actg1|11465|actin, gamma, cytoplasmic 1	AF195094|Actg1|11465|actin, gamma, cytoplasmic 1	AK149927|Actg1|11465|actin, gamma, cytoplasmic 1	AK150209|Actg1|11465|actin, gamma, cytoplasmic 1	AK162157|Actg1|11465|actin, gamma, cytoplasmic 1	AK076081|Actg1|11465|actin, gamma, cytoplasmic 1	AK087983|Actg1|11465|actin, gamma, cytoplasmic 1	AK157726|Actg1|11465|actin, gamma, cytoplasmic 1	AK012251|Actg1|11465|actin, gamma, cytoplasmic 1	AK152202|Actg1|11465|actin, gamma, cytoplasmic 1	AK153446|Actg1|11465|actin, gamma, cytoplasmic 1	AK159867|Actg1|11465|actin, gamma, cytoplasmic 1
mm9_v1_chr7_-_105509797_105509909	0.196006	HIF1A.p2	AK035461|Tsku|244152|tsukushin	AK053973|Tsku|244152|tsukushin	AK137208|Tsku|244152|tsukushin	NM_001024619|Tsku|244152|tsukushin	NM_001168540|Tsku|244152|tsukushin	NM_001168541|Tsku|244152|tsukushin	NM_001168539|Tsku|244152|tsukushin
mm9_v1_chr7_-_31741821_31741928	0.195995	HIF1A.p2	BC082995|Usf2|22282|upstream transcription factor 2	NM_011680|Usf2|22282|upstream transcription factor 2
mm9_v1_chr2_-_168032561_168032640	0.195407	HIF1A.p2	NM_009628|Adnp|11538|activity-dependent neuroprotective protein	AK129214|Adnp|11538|activity-dependent neuroprotective protein
mm9_v1_chr8_+_12757011_12757296	0.193547	HIF1A.p2	AK147497|Atp11a|50770|ATPase, class VI, type 11A	NM_015804|Atp11a|50770|ATPase, class VI, type 11A	AF156551|Atp11a|50770|ATPase, class VI, type 11A	BC145399|Atp11a|50770|ATPase, class VI, type 11A	BC145400|Atp11a|50770|ATPase, class VI, type 11A	BC138715|Atp11a|50770|ATPase, class VI, type 11A
mm9_v1_chr2_+_147190729_147190795	0.191769	HIF1A.p2	AB080656|Pax1|18503|paired box gene 1	NM_008780|Pax1|18503|paired box gene 1	AK134066|Pax1|18503|paired box gene 1	M69222|Pax1|18503|paired box gene 1
mm9_v1_chr13_-_93962125_93962314	0.191462	HIF1A.p2	AK146086|Papd4|100715|PAP associated domain containing 4	BC016629|Papd4|100715|PAP associated domain containing 4	NM_133905|Papd4|100715|PAP associated domain containing 4
mm9_v1_chr1_-_75138905_75138941	0.19029	HIF1A.p2	BC028815|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK029090|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	NM_026977|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr5_+_93522512_93522577	0.189691	HIF1A.p2	AK028475|Sept11|52398|septin 11	BC031456|Sept11|52398|septin 11
mm9_v1_chr8_+_23970006_23970020	0.189629	HIF1A.p2	AK028058|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK082463|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	NM_001081149|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK039615|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK036885|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK054322|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK132474|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3	AK143408|Myst3|244349|MYST histone acetyltransferase (monocytic leukemia) 3
mm9_v1_chr5_-_107718388_107718399	0.189305	HIF1A.p2	AF039601|Tgfbr3|21814|transforming growth factor, beta receptor III
mm9_v1_chr9_-_106587984_106588005	0.188825	HIF1A.p2	AK009326|Tex264|21767|testis expressed gene 264	NM_011573|Tex264|21767|testis expressed gene 264	X80428|Tex264|21767|testis expressed gene 264
mm9_v1_chr6_-_112439765_112439801	0.18838	HIF1A.p2	AK143340|Oxtr|18430|oxytocin receptor	NM_001081147|Oxtr|18430|oxytocin receptor
mm9_v1_chr7_+_134388006_134388047	0.187502	HIF1A.p2	AK090240|Zfp771|244216|zinc finger protein 771	NM_177362|Zfp771|244216|zinc finger protein 771	AK159461|Zfp771|244216|zinc finger protein 771
mm9_v1_chr12_+_27154180_27154275	0.187189	HIF1A.p2	BC027329|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK004595|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK153469|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK153429|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150543|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150885|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150725|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	AK150512|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	BC057565|Cmpk2|22169|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial
mm9_v1_chr4_+_118781405_118781458	0.184402	HIF1A.p2	AK155252|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	AK170425|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	AK089353|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	AK170873|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1	M22998|Slc2a1|20525|solute carrier family 2 (facilitated glucose transporter), member 1
mm9_v1_chr10_-_61949345_61949552	0.18421	HIF1A.p2	AK028096|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	NM_001113355|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK086851|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK150244|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK151360|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	BC007148|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK149859|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	BC058236|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK147989|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK152424|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK165853|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	S41204|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK159783|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK167592|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK168537|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK168213|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	NM_133672|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)
mm9_v1_chr12_-_101963226_101963268	0.183125	HIF1A.p2	AY341873|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	AY341881|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	BC035298|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5	NM_153587|Rps6ka5|73086|ribosomal protein S6 kinase, polypeptide 5
mm9_v1_chrX_+_68809163_68809181	0.181735	HIF1A.p2	NM_008253|Hmgb3|15354|high mobility group box 3	AK032163|Hmgb3|15354|high mobility group box 3
mm9_v1_chr16_+_31664022_31664124	0.180979	HIF1A.p2	AK220189|Dlg1|13383|discs, large homolog 1 (Drosophila)	BC057118|Dlg1|13383|discs, large homolog 1 (Drosophila)	NM_007862|Dlg1|13383|discs, large homolog 1 (Drosophila)
mm9_v1_chr8_+_113618575_113618644	0.180154	HIF1A.p2	AY223867|Pdpr|319518|pyruvate dehydrogenase phosphatase regulatory subunit	NM_198308|Pdpr|319518|pyruvate dehydrogenase phosphatase regulatory subunit
mm9_v1_chr5_-_31522889_31523027	0.1801	HIF1A.p2	BC009004|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	NM_008014|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chr12_+_8681155_8681226	0.179653	HIF1A.p2	AK122225|Pum2|80913|pumilio 2 (Drosophila)	AK141682|Pum2|80913|pumilio 2 (Drosophila)	AY027917|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr4_+_129190877_129190896	0.176784	HIF1A.p2	AK079390|Marcksl1|17357|MARCKS-like 1	AK150261|Marcksl1|17357|MARCKS-like 1	AK152990|Marcksl1|17357|MARCKS-like 1	AK169355|Marcksl1|17357|MARCKS-like 1	X61399|Marcksl1|17357|MARCKS-like 1	BC006757|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr12_+_85410273_85410274	0.176768	HIF1A.p2	BC016076|Acot5|217698|acyl-CoA thioesterase 5	AY563099|Acot5|217698|acyl-CoA thioesterase 5	NM_145444|Acot5|217698|acyl-CoA thioesterase 5
mm9_v1_chr12_+_88488644_88488668	0.175867	HIF1A.p2	BC031777|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	NM_010363|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr9_+_56786000_56786014	0.175374	HIF1A.p2	AK209259|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr7_+_86955612_86955621	0.173356	HIF1A.p2	NM_008589|Mesp2|17293|mesoderm posterior 2	U71125|Mesp2|17293|mesoderm posterior 2
mm9_v1_chr13_+_113590999_113591130	0.173279	HIF1A.p2	BC061161|Ppap2a|19012|phosphatidic acid phosphatase type 2A	NM_008247|Ppap2a|19012|phosphatidic acid phosphatase type 2A	L43371|Ppap2a|19012|phosphatidic acid phosphatase type 2A	AK077275|Ppap2a|19012|phosphatidic acid phosphatase type 2A	D84376|Ppap2a|19012|phosphatidic acid phosphatase type 2A	NM_008903|Ppap2a|19012|phosphatidic acid phosphatase type 2A
mm9_v1_chr5_-_53060929_53060974	0.172302	HIF1A.p2	BC062133|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	AK033654|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	NM_172490|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	AK049338|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	AK153792|Sepsecs|211006|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
mm9_v1_chr18_-_16966954_16967033	0.172085	HIF1A.p2	AK087418|Cdh2|12558|cadherin 2	BC022107|Cdh2|12558|cadherin 2	AK032826|Cdh2|12558|cadherin 2
mm9_v1_chr3_-_88753853_88753947	0.171651	HIF1A.p2	AK014280|Dap3|65111|death associated protein 3	AK014889|Dap3|65111|death associated protein 3	AK088960|Dap3|65111|death associated protein 3	AK032275|Dap3|65111|death associated protein 3	AJ250375|Dap3|65111|death associated protein 3
mm9_v1_chr2_-_27282344_27282431	0.171281	HIF1A.p2	NM_009500|Vav2|22325|vav 2 oncogene	U37017|Vav2|22325|vav 2 oncogene	BC053060|Vav2|22325|vav 2 oncogene
mm9_v1_chr16_-_32003226_32003372	0.170767	HIF1A.p2	AK158338|Senp5|320213|SUMO/sentrin specific peptidase 5	AY522918|Senp5|320213|SUMO/sentrin specific peptidase 5	BC080830|Senp5|320213|SUMO/sentrin specific peptidase 5	AK043171|Senp5|320213|SUMO/sentrin specific peptidase 5	AK042087|Senp5|320213|SUMO/sentrin specific peptidase 5	AK028177|Senp5|320213|SUMO/sentrin specific peptidase 5	NM_177103|Senp5|320213|SUMO/sentrin specific peptidase 5
mm9_v1_chr10_+_5959030_5959157	0.169379	HIF1A.p2	AK030936|Zbtb2|381990|zinc finger and BTB domain containing 2	AK160748|Zbtb2|381990|zinc finger and BTB domain containing 2
mm9_v1_chr8_+_72315061_72315156	0.168785	HIF1A.p2	BC138721|Atp13a1|170759|ATPase type 13A1	BC138722|Atp13a1|170759|ATPase type 13A1	NM_133224|Atp13a1|170759|ATPase type 13A1	AB035381|Atp13a1|170759|ATPase type 13A1	AK052057|Atp13a1|170759|ATPase type 13A1	BC078635|Atp13a1|170759|ATPase type 13A1
mm9_v1_chr11_-_5344795_5344912	0.168475	HIF1A.p2	AK163639|Znrf3|407821|zinc and ring finger 3	NM_001080924|Znrf3|407821|zinc and ring finger 3
mm9_v1_chr11_-_86621130_86621161	0.167785	HIF1A.p2	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr2_+_104966685_104966779	0.16729	HIF1A.p2	M55512|Wt1|22431|Wilms tumor 1 homolog	NM_144783|Wt1|22431|Wilms tumor 1 homolog
mm9_v1_chr11_-_21270779_21270881	0.167262	HIF1A.p2	NM_139297|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr8_-_28338915_28339032	0.166219	HIF1A.p2	AF193027|Adrb3|11556|adrenergic receptor, beta 3	BC132000|Adrb3|11556|adrenergic receptor, beta 3
mm9_v1_chr1_-_173211042_173211071	0.165997	HIF1A.p2	D45185|Ppox|19044|protoporphyrinogen oxidase
mm9_v1_chr1_+_74818609_74818719	0.16568	HIF1A.p2	M89800|Wnt6|22420|wingless-related MMTV integration site 6
mm9_v1_chr4_+_22284682_22284762	0.165446	HIF1A.p2	AK028786|Fbxl4|269514|F-box and leucine-rich repeat protein 4	AK032391|Fbxl4|269514|F-box and leucine-rich repeat protein 4	NM_172988|Fbxl4|269514|F-box and leucine-rich repeat protein 4	AK083661|Fbxl4|269514|F-box and leucine-rich repeat protein 4	AK051429|Fbxl4|269514|F-box and leucine-rich repeat protein 4	BC033265|Fbxl4|269514|F-box and leucine-rich repeat protein 4
mm9_v1_chr7_-_5077551_5077557	0.164567	HIF1A.p2	AK006350|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene	BC061180|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene	BC099553|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene	NM_009028|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene	BC138995|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene	BC145722|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene	BC049619|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene	L32752|Rasl2-9-ps|19428|RAS-like, family 2, locus 9, pseudogene
mm9_v1_chr11_-_102178559_102178600	0.164185	HIF1A.p2	AK158861|Ubtf|21429|upstream binding transcription factor, RNA polymerase I	NM_001044383|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr7_+_148653250_148653309	0.163854	HIF1A.p2	NM_001111049|Cd151|12476|CD151 antigen	NM_009842|Cd151|12476|CD151 antigen	D89290|Cd151|12476|CD151 antigen
mm9_v1_chr5_-_35917699_35917718	0.163661	HIF1A.p2	AK019101|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	BC152332|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	AK046957|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	AK132402|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene	NM_030208|2310079F23Rik|78890|RIKEN cDNA 2310079F23 gene
mm9_v1_chr16_+_90831052_90831391	0.163157	HIF1A.p2	AK037486|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC132305|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC144751|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC157969|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	BC100350|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	NM_027627|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene	AF358257|4931408A02Rik|70967|RIKEN cDNA 4931408A02 gene
mm9_v1_chr2_-_65076584_65076777	0.162877	HIF1A.p2	AK052533|Cobll1|319876|Cobl-like 1	AK144943|Cobll1|319876|Cobl-like 1	AY308746|Cobll1|319876|Cobl-like 1	BC067007|Cobll1|319876|Cobl-like 1	NM_027225|Cobll1|319876|Cobl-like 1	NM_177025|Cobll1|319876|Cobl-like 1	AK037010|Cobll1|319876|Cobl-like 1
mm9_v1_chr13_-_38085986_38086062	0.162571	HIF1A.p2	BC011255|Ssr1|107513|signal sequence receptor, alpha	AK010884|Ssr1|107513|signal sequence receptor, alpha	AK167793|Ssr1|107513|signal sequence receptor, alpha	AK160285|Ssr1|107513|signal sequence receptor, alpha	AF326229|Ssr1|107513|signal sequence receptor, alpha	AF395811|Ssr1|107513|signal sequence receptor, alpha	AY993942|Ssr1|107513|signal sequence receptor, alpha	AK166235|Ssr1|107513|signal sequence receptor, alpha	AK031538|Ssr1|107513|signal sequence receptor, alpha	AB009295|Ssr1|107513|signal sequence receptor, alpha	NM_025965|Ssr1|107513|signal sequence receptor, alpha
mm9_v1_chr7_+_57033711_57033769	0.160954	HIF1A.p2	AK010534|Prmt3|71974|protein arginine N-methyltransferase 3	AK031738|Prmt3|71974|protein arginine N-methyltransferase 3	NM_133740|Prmt3|71974|protein arginine N-methyltransferase 3	AK155236|Prmt3|71974|protein arginine N-methyltransferase 3	AK008118|Prmt3|71974|protein arginine N-methyltransferase 3	AK049836|Prmt3|71974|protein arginine N-methyltransferase 3	BC050775|Prmt3|71974|protein arginine N-methyltransferase 3	AK086646|Prmt3|71974|protein arginine N-methyltransferase 3
mm9_v1_chr13_-_112599181_112599204	0.160374	HIF1A.p2	AB014614|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	AF117340|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1	NM_011945|Map3k1|26401|mitogen-activated protein kinase kinase kinase 1
mm9_v1_chr7_-_146101096_146101214	0.157481	HIF1A.p2	BC033278|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AF041054|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK170865|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	BC046603|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK152610|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK014223|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	AK075943|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3	NM_009760|Bnip3|12176|BCL2/adenovirus E1B interacting protein 3
mm9_v1_chr12_-_70994089_70994191	0.156761	HIF1A.p2	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr13_+_15555483_15555555	0.15494	HIF1A.p2	AK158261|Gli3|14634|GLI-Kruppel family member GLI3	NM_008130|Gli3|14634|GLI-Kruppel family member GLI3
mm9_v1_chr5_-_100858497_100858536	0.154608	HIF1A.p2	AK017316|5430416N02Rik|100041797|RIKEN cDNA 5430416N02 gene	AK034784|5430416N02Rik|100041797|RIKEN cDNA 5430416N02 gene
mm9_v1_chr2_+_140221165_140221195	0.154426	HIF1A.p2	AK134694|Macrod2|72899|MACRO domain containing 2	NM_001013802|Macrod2|72899|MACRO domain containing 2	AK013491|Macrod2|72899|MACRO domain containing 2	NM_028387|Macrod2|72899|MACRO domain containing 2	AK011824|Macrod2|72899|MACRO domain containing 2	AK165589|Macrod2|72899|MACRO domain containing 2	AK029184|Macrod2|72899|MACRO domain containing 2	AK160433|Macrod2|72899|MACRO domain containing 2	AK004072|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr7_+_134920839_134920910	0.153331	HIF1A.p2	NM_178029|Setd1a|233904|SET domain containing 1A
mm9_v1_chr4_-_102887390_102887488	0.153047	HIF1A.p2	AK169775|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK220330|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK049462|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK052968|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK049180|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC115984|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	NM_177732|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
mm9_v1_chr1_-_33871349_33871443	0.152698	HIF1A.p2	AK015797|Zfp451|98403|zinc finger protein 451
mm9_v1_chr9_-_44575861_44575929	0.152272	HIF1A.p2	BC034754|Arcn1|213827|archain 1	BC083152|Arcn1|213827|archain 1	BC017124|Arcn1|213827|archain 1	AK031385|Arcn1|213827|archain 1	BC033387|Arcn1|213827|archain 1	NM_145985|Arcn1|213827|archain 1	AK154066|Arcn1|213827|archain 1	AK028556|Arcn1|213827|archain 1	AK128973|Arcn1|213827|archain 1	BC023728|Arcn1|213827|archain 1	AK147747|Arcn1|213827|archain 1	AK047995|Arcn1|213827|archain 1
mm9_v1_chr16_-_20302299_20302462	0.151977	HIF1A.p2	AK039142|Parl|381038|presenilin associated, rhomboid-like	BC083153|Parl|381038|presenilin associated, rhomboid-like	AK151652|Parl|381038|presenilin associated, rhomboid-like	NM_001005767|Parl|381038|presenilin associated, rhomboid-like	AK150980|Parl|381038|presenilin associated, rhomboid-like	AK207637|Parl|381038|presenilin associated, rhomboid-like
mm9_v1_chr5_+_130505237_130505255	0.151677	HIF1A.p2	BC012676|Crcp|12909|calcitonin gene-related peptide-receptor component protein
mm9_v1_chr5_+_104475948_104476060	0.151082	HIF1A.p2	AK158058|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK004444|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK076500|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_028794|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC033921|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm9_v1_chr3_-_110053886_110053935	0.149811	HIF1A.p2	AK034732|Prmt6|99890|protein arginine N-methyltransferase 6	BC066221|Prmt6|99890|protein arginine N-methyltransferase 6	AK157132|Prmt6|99890|protein arginine N-methyltransferase 6	BC022899|Prmt6|99890|protein arginine N-methyltransferase 6	AK172003|Prmt6|99890|protein arginine N-methyltransferase 6	AK087608|Prmt6|99890|protein arginine N-methyltransferase 6	AK172105|Prmt6|99890|protein arginine N-methyltransferase 6	AK172722|Prmt6|99890|protein arginine N-methyltransferase 6	NM_178891|Prmt6|99890|protein arginine N-methyltransferase 6
mm9_v1_chr19_+_22213516_22213606	0.148586	HIF1A.p2	AK173218|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544532|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544533|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544534|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544535|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	AJ544536|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035239|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035240|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035241|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035242|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3	NM_001035243|Trpm3|226025|transient receptor potential cation channel, subfamily M, member 3
mm9_v1_chr12_-_92828018_92828088	0.146521	HIF1A.p2	AF250834|Gtf2a1|83602|general transcription factor II A, 1	BC079909|Gtf2a1|83602|general transcription factor II A, 1	AK139996|Gtf2a1|83602|general transcription factor II A, 1	NM_031391|Gtf2a1|83602|general transcription factor II A, 1
mm9_v1_chr1_+_89749844_89749886	0.142283	HIF1A.p2	NM_177646|Dgkd|227333|diacylglycerol kinase, delta
mm9_v1_chr16_-_18587061_18587061	0.142115	HIF1A.p2	AF326960|Tbx1|21380|T-box 1	BC139474|Tbx1|21380|T-box 1	BC145636|Tbx1|21380|T-box 1	NM_011532|Tbx1|21380|T-box 1
mm9_v1_chr5_-_92512486_92512611	0.139266	HIF1A.p2	AK153893|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK153221|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK151732|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080794|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	NM_001080796|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	BC119806|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	BC122883|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr17_-_45823086_45823135	0.139065	HIF1A.p2	AK090200|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr6_+_113276944_113277091	0.138044	HIF1A.p2	AK146870|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	NM_010957|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	AK167456|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	U88621|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	AF003596|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	U96711|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	BC138733|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	BC138736|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	AK165875|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	Y11247|Ogg1|18294|8-oxoguanine DNA-glycosylase 1	AF000669|Ogg1|18294|8-oxoguanine DNA-glycosylase 1
mm9_v1_chr9_-_108092712_108092716	0.137641	HIF1A.p2	NM_007567|Bsn|12217|bassoon
mm9_v1_chr18_-_46756837_46757206	0.136828	HIF1A.p2	AK202734|Tmed7|66676|transmembrane emp24 protein transport domain containing 7	AK180182|Tmed7|66676|transmembrane emp24 protein transport domain containing 7	AK029576|Tmed7|66676|transmembrane emp24 protein transport domain containing 7	AK076210|Tmed7|66676|transmembrane emp24 protein transport domain containing 7	AK147412|Tmed7|66676|transmembrane emp24 protein transport domain containing 7	AK013936|Tmed7|66676|transmembrane emp24 protein transport domain containing 7	NM_025698|Tmed7|66676|transmembrane emp24 protein transport domain containing 7
mm9_v1_chr15_+_93228780_93228894	0.135621	HIF1A.p2	AK168443|Pphln1|223828|periphilin 1	NM_001083114|Pphln1|223828|periphilin 1	NM_146062|Pphln1|223828|periphilin 1	NM_175363|Pphln1|223828|periphilin 1	AK081606|Pphln1|223828|periphilin 1	AK160138|Pphln1|223828|periphilin 1	BC031486|Pphln1|223828|periphilin 1	AK150904|Pphln1|223828|periphilin 1	BC150854|Pphln1|223828|periphilin 1	AK158488|Pphln1|223828|periphilin 1
mm9_v1_chr18_+_24113147_24113390	0.135327	HIF1A.p2	AK032001|Zfp397|69256|zinc finger protein 397	NM_027007|Zfp397|69256|zinc finger protein 397	AK078454|Zfp397|69256|zinc finger protein 397	BC021456|Zfp397|69256|zinc finger protein 397	AK046270|Zfp397|69256|zinc finger protein 397	AK013086|Zfp397|69256|zinc finger protein 397
mm9_v1_chr16_+_13672078_13672141	0.13425	HIF1A.p2	AK031567|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK013874|Bfar|67118|bifunctional apoptosis regulator	BC027221|Bfar|67118|bifunctional apoptosis regulator	AK012939|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK028592|Bfar|67118|bifunctional apoptosis regulator	NM_025653|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene
mm9_v1_chr13_-_17896909_17896930	0.132307	HIF1A.p2	AK173265|Cdk13|69562|cyclin-dependent kinase 13	NM_001081058|Cdk13|69562|cyclin-dependent kinase 13	NM_027118|Cdk13|69562|cyclin-dependent kinase 13
mm9_v1_chr7_+_107154913_107155009	0.132242	HIF1A.p2	NM_133709|Chrdl2|69121|chordin-like 2	BC019399|Chrdl2|69121|chordin-like 2	AF338222|Chrdl2|69121|chordin-like 2
mm9_v1_chr18_-_10182019_10182100	0.131384	HIF1A.p2	AK149793|Rock1|19877|Rho-associated coiled-coil containing protein kinase 1
mm9_v1_chr2_-_118982714_118982769	0.130431	HIF1A.p2	BC061186|Fam82a2|67809|family with sequence similarity 82, member A2	AK171770|Fam82a2|67809|family with sequence similarity 82, member A2	NM_001033136|Fam82a2|67809|family with sequence similarity 82, member A2
mm9_v1_chr15_-_98364606_98364733	0.130201	HIF1A.p2	BC125631|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC125633|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC145047|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	NM_133714|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC003301|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK046649|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK162714|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK167429|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK168499|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK089025|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK150748|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK151604|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK152604|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	AK153007|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene	BC011085|2310037I24Rik|69612|RIKEN cDNA 2310037I24 gene
mm9_v1_chr11_-_69734709_69734796	0.129488	HIF1A.p2	AK178863|Eif5a|276770|eukaryotic translation initiation factor 5A	AK188886|Eif5a|276770|eukaryotic translation initiation factor 5A	BC008093|Eif5a|276770|eukaryotic translation initiation factor 5A	BC003889|Eif5a|276770|eukaryotic translation initiation factor 5A	BC024899|Eif5a|276770|eukaryotic translation initiation factor 5A	AK011470|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166595|Eif5a|276770|eukaryotic translation initiation factor 5A	AK010183|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr2_+_19367264_19367426	0.128157	HIF1A.p2	AK007922|Ptf1a|19213|pancreas specific transcription factor, 1a	AB035675|Ptf1a|19213|pancreas specific transcription factor, 1a	NM_018809|Ptf1a|19213|pancreas specific transcription factor, 1a	BC132505|Ptf1a|19213|pancreas specific transcription factor, 1a	BC138507|Ptf1a|19213|pancreas specific transcription factor, 1a
mm9_v1_chr2_+_65076812_65076815	0.126778	HIF1A.p2	
mm9_v1_chr16_-_90144013_90144100	0.126545	HIF1A.p2	BC065126|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	AK043966|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr14_+_31362306_31362551	0.125944	HIF1A.p2	AK166763|Tkt|21881|transketolase	AK167084|Tkt|21881|transketolase	AK140965|Tkt|21881|transketolase	AK030446|Tkt|21881|transketolase	NM_009388|Tkt|21881|transketolase	AK152460|Tkt|21881|transketolase	AK002627|Tkt|21881|transketolase	AK012794|Tkt|21881|transketolase	AK145677|Tkt|21881|transketolase	AK150139|Tkt|21881|transketolase	AK150901|Tkt|21881|transketolase	AK159922|Tkt|21881|transketolase	U05809|Tkt|21881|transketolase	AK050793|Tkt|21881|transketolase	AK146157|Tkt|21881|transketolase	AK144146|Tkt|21881|transketolase	AK150769|Tkt|21881|transketolase	AK150844|Tkt|21881|transketolase	AK150856|Tkt|21881|transketolase	AK152245|Tkt|21881|transketolase	AK151916|Tkt|21881|transketolase	AK151969|Tkt|21881|transketolase	AK152886|Tkt|21881|transketolase	BC055336|Tkt|21881|transketolase	AK216935|Tkt|21881|transketolase	AK181952|Tkt|21881|transketolase
mm9_v1_chr11_-_120434075_120434180	0.125701	HIF1A.p2	BC093512|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK168336|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK150755|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	BC008549|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK151351|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr4_-_45543623_45543714	0.125662	HIF1A.p2	NM_001033306|Shb|230126|src homology 2 domain-containing transforming protein B
mm9_v1_chr11_+_85646309_85646316	0.125579	HIF1A.p2	AK149348|Tbx2|21385|T-box 2
mm9_v1_chr2_-_32568570_32568641	0.125496	HIF1A.p2	AK155733|Cdk9|107951|cyclin-dependent kinase 9 (CDC2-related kinase)
mm9_v1_chr10_+_127759512_127759609	0.124218	HIF1A.p2	AF186115|Cnpy2|56530|canopy 2 homolog (zebrafish)	NM_019953|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK150953|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr11_+_96179580_96179580	0.123418	HIF1A.p2	BC095947|Hoxb4|15412|homeobox B4	NM_010459|Hoxb4|15412|homeobox B4
mm9_v1_chr6_-_87761537_87761854	0.123331	HIF1A.p2	AB232640|Rab43|69834|RAB43, member RAS oncogene family	AJ534465|Rab43|69834|RAB43, member RAS oncogene family	AK010874|Rab43|69834|RAB43, member RAS oncogene family	AK158283|Rab43|69834|RAB43, member RAS oncogene family	NM_001039394|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr15_-_75724685_75724730	0.123221	HIF1A.p2	AK159127|Naprt1|223646|nicotinate phosphoribosyltransferase domain containing 1	AK170518|Naprt1|223646|nicotinate phosphoribosyltransferase domain containing 1
mm9_v1_chr8_+_123640069_123640092	0.122467	HIF1A.p2	AK076319|Foxc2|14234|forkhead box C2	AK146887|Foxc2|14234|forkhead box C2	NM_013519|Foxc2|14234|forkhead box C2	X74040|Foxc2|14234|forkhead box C2
mm9_v1_chrX_+_132804791_132804829	0.121528	HIF1A.p2	NM_001110233|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_001110234|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_009750|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr3_+_144233390_144233449	0.121146	HIF1A.p2	NM_053102|Sep15|93684|selenoprotein	AF288740|Sep15|93684|selenoprotein
mm9_v1_chr8_-_73132125_73132308	0.120944	HIF1A.p2	BC002150|Ssbp4|76900|single stranded DNA binding protein 4	AK157387|Ssbp4|76900|single stranded DNA binding protein 4	AK154336|Ssbp4|76900|single stranded DNA binding protein 4	NM_133772|Ssbp4|76900|single stranded DNA binding protein 4
mm9_v1_chr10_+_93661777_93661836	0.120618	HIF1A.p2	AK003131|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK003322|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK008876|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK032774|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK134765|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK153240|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK167943|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm9_v1_chr12_-_74647339_74647462	0.12056	HIF1A.p2	BC119224|Tmem30b|238257|transmembrane protein 30B	BC119226|Tmem30b|238257|transmembrane protein 30B	AK030302|Tmem30b|238257|transmembrane protein 30B	AK037246|Tmem30b|238257|transmembrane protein 30B	AK033580|Tmem30b|238257|transmembrane protein 30B	NM_178715|Tmem30b|238257|transmembrane protein 30B	AK169014|Tmem30b|238257|transmembrane protein 30B
mm9_v1_chr13_+_14705508_14705551	0.120379	HIF1A.p2	AK136115|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	NM_008944|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK151883|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK152862|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK167752|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012990|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK035578|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK154011|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012119|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	BC026768|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AF099733|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2
mm9_v1_chr9_-_94438499_94438504	0.120361	HIF1A.p2	NM_001033145|1190002N15Rik|68861|RIKEN cDNA 1190002N15 gene
mm9_v1_chr1_-_57463278_57463380	0.119745	HIF1A.p2	BC099495|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC058590|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC132289|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC144765|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	BC144766|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene	AK139666|1110034B05Rik|68736|RIKEN cDNA 1110034B05 gene
mm9_v1_chr3_+_157197301_157197382	0.119624	HIF1A.p2	AK150291|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK152536|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168613|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167983|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167766|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC049115|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168162|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169335|Zranb2|53861|zinc finger, RAN-binding domain containing 2	NM_017381|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146275|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK160862|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK167756|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK168033|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC132547|Zranb2|53861|zinc finger, RAN-binding domain containing 2	BC138575|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK166534|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK169114|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AK146854|Zranb2|53861|zinc finger, RAN-binding domain containing 2	AF133818|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr2_+_72817468_72817530	0.118567	HIF1A.p2	AK005870|1700011J10Rik|67686|RIKEN cDNA 1700011J10 gene	AK013593|1700011J10Rik|67686|RIKEN cDNA 1700011J10 gene
mm9_v1_chr12_-_99812921_99812948	0.118239	HIF1A.p2	AK019376|Kcnk10|72258|potassium channel, subfamily K, member 10
mm9_v1_chr1_+_107886982_107886982	0.117424	HIF1A.p2	AK046562|Zcchc2|227449|zinc finger, CCHC domain containing 2	NM_001122675|Zcchc2|227449|zinc finger, CCHC domain containing 2	NM_001122676|Zcchc2|227449|zinc finger, CCHC domain containing 2
mm9_v1_chr17_+_13200673_13200911	0.116423	HIF1A.p2	NM_013671|Sod2|20656|superoxide dismutase 2, mitochondrial	AK168591|Sod2|20656|superoxide dismutase 2, mitochondrial	AK135435|Sod2|20656|superoxide dismutase 2, mitochondrial	AK002428|Sod2|20656|superoxide dismutase 2, mitochondrial	AK002534|Sod2|20656|superoxide dismutase 2, mitochondrial	AK168082|Sod2|20656|superoxide dismutase 2, mitochondrial	AK167521|Sod2|20656|superoxide dismutase 2, mitochondrial	AK012354|Sod2|20656|superoxide dismutase 2, mitochondrial	AK152047|Sod2|20656|superoxide dismutase 2, mitochondrial	X04972|Sod2|20656|superoxide dismutase 2, mitochondrial	BC066063|Sod2|20656|superoxide dismutase 2, mitochondrial	BC010548|Sod2|20656|superoxide dismutase 2, mitochondrial	Z18857|Sod2|20656|superoxide dismutase 2, mitochondrial	CT010273|Sod2|20656|superoxide dismutase 2, mitochondrial
mm9_v1_chr11_+_70658261_70658270	0.115477	HIF1A.p2	AK134587|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	NM_019400|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr7_-_133645796_133645958	0.115414	HIF1A.p2	AK158626|Atxn2l|233871|ataxin 2-like	AK168745|Atxn2l|233871|ataxin 2-like
mm9_v1_chr17_-_6987086_6987092	0.115355	HIF1A.p2	BC048181|Ezr|22350|ezrin
mm9_v1_chr12_-_15822792_15822800	0.115131	HIF1A.p2	AK080064|Trib2|217410|tribbles homolog 2 (Drosophila)	AK082329|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr6_+_83036358_83036417	0.114993	HIF1A.p2	NM_010692|Lbx2|16815|ladybird homeobox homolog 2 (Drosophila)	AK002897|Lbx2|16815|ladybird homeobox homolog 2 (Drosophila)	BC109347|Lbx2|16815|ladybird homeobox homolog 2 (Drosophila)	AF146150|Lbx2|16815|ladybird homeobox homolog 2 (Drosophila)
mm9_v1_chr10_-_60215512_60215513	0.114873	HIF1A.p2	BC137864|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3	BC144983|Slc29a3|71279|solute carrier family 29 (nucleoside transporters), member 3
mm9_v1_chrX_-_12338914_12338976	0.11366	HIF1A.p2	AK163306|Med14|26896|mediator complex subunit 14	AK084044|Med14|26896|mediator complex subunit 14
mm9_v1_chr5_-_66543123_66543228	0.113323	HIF1A.p2	AK170082|Rbm47|245945|RNA binding motif protein 47	NM_001127382|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr5_-_33972265_33972318	0.113279	HIF1A.p2	AK017321|Fam53a|74504|family with sequence similarity 53, member A	NM_178390|Fam53a|74504|family with sequence similarity 53, member A
mm9_v1_chr15_+_81977633_81977746	0.112331	HIF1A.p2	AK155857|Srebf2|20788|sterol regulatory element binding factor 2	AK032847|Srebf2|20788|sterol regulatory element binding factor 2	AK053802|Srebf2|20788|sterol regulatory element binding factor 2	BC069989|Srebf2|20788|sterol regulatory element binding factor 2	BC048071|Srebf2|20788|sterol regulatory element binding factor 2	AK172219|Srebf2|20788|sterol regulatory element binding factor 2	NM_033218|Srebf2|20788|sterol regulatory element binding factor 2	BC026556|Srebf2|20788|sterol regulatory element binding factor 2	BC014730|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr5_+_122872449_122872531	0.111921	HIF1A.p2	NM_019805|Anapc7|56317|anaphase promoting complex subunit 7	AK164202|Anapc7|56317|anaphase promoting complex subunit 7	AF076607|Anapc7|56317|anaphase promoting complex subunit 7	AK030775|Anapc7|56317|anaphase promoting complex subunit 7	AK137286|Anapc7|56317|anaphase promoting complex subunit 7	AK150764|Anapc7|56317|anaphase promoting complex subunit 7	AK150891|Anapc7|56317|anaphase promoting complex subunit 7	AK153114|Anapc7|56317|anaphase promoting complex subunit 7	BC006635|Anapc7|56317|anaphase promoting complex subunit 7	AK049968|Anapc7|56317|anaphase promoting complex subunit 7	AK159523|Anapc7|56317|anaphase promoting complex subunit 7
mm9_v1_chr7_+_97591287_97591327	0.110524	HIF1A.p2	NM_145151|Crebzf|233490|CREB/ATF bZIP transcription factor
mm9_v1_chr5_+_120881778_120882006	0.110377	HIF1A.p2	U61155|Lhx5|16873|LIM homeobox protein 5	AK140208|Lhx5|16873|LIM homeobox protein 5	NM_008499|Lhx5|16873|LIM homeobox protein 5	AK048778|Lhx5|16873|LIM homeobox protein 5	AK033927|Lhx5|16873|LIM homeobox protein 5	BC057585|Lhx5|16873|LIM homeobox protein 5
mm9_v1_chr11_-_97436439_97436456	0.109609	HIF1A.p2	AF040944|Srcin1|56013|SRC kinase signaling inhibitor 1	NM_018873|Srcin1|56013|SRC kinase signaling inhibitor 1	U59873|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chrX_+_110411860_110411875	0.108781	HIF1A.p2	AK045154|Dach2|93837|dachshund 2 (Drosophila)	NM_001142570|Dach2|93837|dachshund 2 (Drosophila)	NM_033605|Dach2|93837|dachshund 2 (Drosophila)	AF257217|Dach2|93837|dachshund 2 (Drosophila)	BC059233|Dach2|93837|dachshund 2 (Drosophila)
mm9_v1_chr5_+_115461102_115461223	0.108163	HIF1A.p2	BC086646|Sppl3|74585|signal peptide peptidase 3	AK014709|Sppl3|74585|signal peptide peptidase 3
mm9_v1_chr2_-_58210162_58210168	0.108063	HIF1A.p2	AK142396|Acvr1c|269275|activin A receptor, type IC	NM_001111030|Acvr1c|269275|activin A receptor, type IC
mm9_v1_chr11_-_95926302_95926380	0.106604	HIF1A.p2	BC027266|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK168942|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	BC054412|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr9_-_44215589_44215630	0.106423	HIF1A.p2	AF233340|Trappc4|60409|trafficking protein particle complex 4	BC038898|Trappc4|60409|trafficking protein particle complex 4	NM_021789|Trappc4|60409|trafficking protein particle complex 4
mm9_v1_chr19_-_6532339_6532383	0.106129	HIF1A.p2	AK045662|Gm14964|100008567|predicted gene 14964
mm9_v1_chr2_+_69660426_69660529	0.105568	HIF1A.p2	BC072626|Klhl23|277396|kelch-like 23 (Drosophila)	NM_177784|Klhl23|277396|kelch-like 23 (Drosophila)	AK048518|Klhl23|277396|kelch-like 23 (Drosophila)
mm9_v1_chr11_+_70658310_70658476	0.104537	HIF1A.p2	AK205489|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AB001750|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	D86066|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC129853|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	BC129854|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AF248489|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1	AF248490|Rabep1|54189|rabaptin, RAB GTPase binding effector protein 1
mm9_v1_chr9_-_106150210_106150284	0.104311	HIF1A.p2	NM_020559|Alas1|11655|aminolevulinic acid synthase 1
mm9_v1_chr2_+_152119607_152119757	0.103535	HIF1A.p2	AK076124|Tbc1d20|67231|TBC1 domain family, member 20	NM_024196|Tbc1d20|67231|TBC1 domain family, member 20	AK168985|Tbc1d20|67231|TBC1 domain family, member 20	AK006877|Tbc1d20|67231|TBC1 domain family, member 20	AK085702|Tbc1d20|67231|TBC1 domain family, member 20	AK158274|Tbc1d20|67231|TBC1 domain family, member 20	AK082369|Tbc1d20|67231|TBC1 domain family, member 20	AK172349|Tbc1d20|67231|TBC1 domain family, member 20	BC086617|Tbc1d20|67231|TBC1 domain family, member 20	BC040089|Tbc1d20|67231|TBC1 domain family, member 20	AK036751|Tbc1d20|67231|TBC1 domain family, member 20	AK188394|Tbc1d20|67231|TBC1 domain family, member 20
mm9_v1_chr12_+_114047301_114047353	0.103003	HIF1A.p2	AK077390|BC022687|217887|cDNA sequence BC022687
mm9_v1_chr12_+_33639034_33639066	0.10285	HIF1A.p2	NM_198710|Sypl|19027|synaptophysin-like protein
mm9_v1_chr19_+_32832002_32832163	0.102688	HIF1A.p2	NM_008960|Pten|19211|phosphatase and tensin homolog	AK164302|Pten|19211|phosphatase and tensin homolog	AK088717|Pten|19211|phosphatase and tensin homolog	AK076980|Pten|19211|phosphatase and tensin homolog
mm9_v1_chr8_-_124175827_124175832	0.102304	HIF1A.p2	BC132449|Zcchc14|142682|zinc finger, CCHC domain containing 14	BC137853|Zcchc14|142682|zinc finger, CCHC domain containing 14	AB030244|Zcchc14|142682|zinc finger, CCHC domain containing 14	NM_080855|Zcchc14|142682|zinc finger, CCHC domain containing 14
mm9_v1_chrX_-_49034524_49034544	0.100456	HIF1A.p2	AK031649|Hs6st2|50786|heparan sulfate 6-O-sulfotransferase 2
mm9_v1_chr2_-_181327165_181327210	0.100225	HIF1A.p2	AK129308|Znf512b|269401|zinc finger protein 512B	NM_001164597|Znf512b|269401|zinc finger protein 512B
mm9_v1_chr2_+_16277924_16277950	0.0991823	HIF1A.p2	AK035165|Plxdc2|67448|plexin domain containing 2	AK004640|Plxdc2|67448|plexin domain containing 2	NM_026162|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr6_+_65729006_65729018	0.0986834	HIF1A.p2	AK021384|Prdm5|70779|PR domain containing 5	BC089598|Prdm5|70779|PR domain containing 5	AK018310|Prdm5|70779|PR domain containing 5
mm9_v1_chr1_+_193730645_193730708	0.0972965	HIF1A.p2	AK145100|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	NM_009579|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	BC052166|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1
mm9_v1_chr15_-_93349866_93349962	0.0969477	HIF1A.p2	BC117892|Prickle1|106042|prickle homolog 1 (Drosophila)	BC117893|Prickle1|106042|prickle homolog 1 (Drosophila)	AK147883|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr3_-_127599117_127599275	0.096734	HIF1A.p2	BC116791|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	BC116793|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK017758|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK012470|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK163003|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK162420|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	NM_027482|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene
mm9_v1_chr7_+_97591618_97591648	0.0962071	HIF1A.p2	AF408398|Crebzf|233490|CREB/ATF bZIP transcription factor
mm9_v1_chr2_+_146047656_146047846	0.0961804	HIF1A.p2	BC051240|Insm1|53626|insulinoma-associated 1	NM_016889|Insm1|53626|insulinoma-associated 1	AF044669|Insm1|53626|insulinoma-associated 1	BC082809|Insm1|53626|insulinoma-associated 1
mm9_v1_chr9_+_62189138_62189256	0.0953102	HIF1A.p2	NM_009672|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AK020753|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	BC062899|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AF022957|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr7_-_36340918_36340946	0.0905236	HIF1A.p2	BC051553|Nudt19|110959|nudix (nucleoside diphosphate linked moiety X)-type motif 19	NM_033080|Nudt19|110959|nudix (nucleoside diphosphate linked moiety X)-type motif 19
mm9_v1_chr1_-_181733742_181733841	0.0901807	HIF1A.p2	BC138343|Ahctf1|226747|AT hook containing transcription factor 1	BC138344|Ahctf1|226747|AT hook containing transcription factor 1	AB059278|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr4_+_128331945_128331981	0.0900176	HIF1A.p2	NM_001195130|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chr13_+_63916547_63916676	0.0899954	HIF1A.p2	AK082850|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	AK049874|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	NM_001013608|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	AK002307|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	NM_023507|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene	AK035054|0610007P08Rik|76251|RIKEN cDNA 0610007P08 gene
mm9_v1_chr9_-_24500725_24500736	0.0898899	HIF1A.p2	AK030128|Dpy19l2|320752|dpy-19-like 2 (C. elegans)	AK029497|Dpy19l2|320752|dpy-19-like 2 (C. elegans)	NM_001166207|Dpy19l2|320752|dpy-19-like 2 (C. elegans)
mm9_v1_chr1_+_74283079_74283111	0.0892942	HIF1A.p2	AK152356|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr4_-_12099125_12099161	0.0892742	HIF1A.p2	AK032690|Fam92a|68099|family with sequence similarity 92, member A	AK078438|Fam92a|68099|family with sequence similarity 92, member A	AK088705|Fam92a|68099|family with sequence similarity 92, member A	NM_026558|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr2_+_18598882_18599030	0.0882121	HIF1A.p2	BC053708|Bmi1|12151|Bmi1 polycomb ring finger oncogene
mm9_v1_chr7_-_123586952_123586976	0.0872903	HIF1A.p2	AK163446|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK049609|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	U52193|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK019194|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	AK140908|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide	NM_011083|Pik3c2a|18704|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm9_v1_chr11_+_106137853_106138061	0.0869622	HIF1A.p2	AK076581|Tcam1|75870|testicular cell adhesion molecule 1	NM_029467|Tcam1|75870|testicular cell adhesion molecule 1	AK016263|Tcam1|75870|testicular cell adhesion molecule 1	BC050746|Tcam1|75870|testicular cell adhesion molecule 1
mm9_v1_chr15_+_80541675_80541764	0.08651	HIF1A.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr5_+_36236113_36236140	0.0852915	HIF1A.p2	AK043209|Afap1|70292|actin filament associated protein 1	AK148000|Afap1|70292|actin filament associated protein 1	AK011153|Afap1|70292|actin filament associated protein 1
mm9_v1_chr5_+_65782735_65782836	0.0848473	HIF1A.p2	AK077192|Lias|79464|lipoic acid synthetase	NM_024471|Lias|79464|lipoic acid synthetase	AK031851|Lias|79464|lipoic acid synthetase	AK013575|Lias|79464|lipoic acid synthetase	AK048744|Lias|79464|lipoic acid synthetase	BC002141|Lias|79464|lipoic acid synthetase	AK049548|Lias|79464|lipoic acid synthetase	AB057731|Lias|79464|lipoic acid synthetase	AK045167|Lias|79464|lipoic acid synthetase
mm9_v1_chr2_-_30329737_30329744	0.08301	HIF1A.p2	AK034055|Ier5l|72500|immediate early response 5-like
mm9_v1_chr11_-_95375878_95375924	0.0829106	HIF1A.p2	AK158760|Nxph3|104079|neurexophilin 3	NM_130858|Nxph3|104079|neurexophilin 3
mm9_v1_chr17_-_13185014_13185022	0.0827851	HIF1A.p2	AK156334|Wtap|60532|Wilms' tumour 1-associating protein
mm9_v1_chr12_-_60320438_60320474	0.0823087	HIF1A.p2	BC020022|Fbxo33|70611|F-box protein 33	NM_001033156|Fbxo33|70611|F-box protein 33
mm9_v1_chr19_+_38911056_38911166	0.0820281	HIF1A.p2	AK172979|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	NM_145952|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138056|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC138057|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12	BC145129|Tbc1d12|209478|TBC1D12: TBC1 domain family, member 12
mm9_v1_chr2_+_163899842_163899948	0.081876	HIF1A.p2	BC054521|Stk4|58231|serine/threonine kinase 4	AF271360|Stk4|58231|serine/threonine kinase 4	AK028838|Stk4|58231|serine/threonine kinase 4	NM_021420|Stk4|58231|serine/threonine kinase 4
mm9_v1_chr8_+_119682034_119682036	0.0818367	HIF1A.p2	NM_001081151|Gan|209239|giant axonal neuropathy	BC112432|Gan|209239|giant axonal neuropathy	AK039455|Gan|209239|giant axonal neuropathy
mm9_v1_chr15_+_31531856_31531890	0.0808292	HIF1A.p2	NM_026546|Fam173b|68073|family with sequence similarity 173, member B	AK020868|Fam173b|68073|family with sequence similarity 173, member B	AK160923|Fam173b|68073|family with sequence similarity 173, member B	AK003724|Fam173b|68073|family with sequence similarity 173, member B	AK044518|Fam173b|68073|family with sequence similarity 173, member B	BC030179|Fam173b|68073|family with sequence similarity 173, member B
mm9_v1_chr1_+_74283144_74283225	0.0804853	HIF1A.p2	AK151513|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr1_-_184679281_184679310	0.0802003	HIF1A.p2	BC150917|4922505E12Rik|433386|RIKEN cDNA 4922505E12 gene	AK132754|4922505E12Rik|433386|RIKEN cDNA 4922505E12 gene	NM_001033547|4922505E12Rik|433386|RIKEN cDNA 4922505E12 gene
mm9_v1_chr6_-_97437749_97437990	0.079739	HIF1A.p2	AK143978|Frmd4b|232288|FERM domain containing 4B	AF327856|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr16_+_33829715_33830005	0.078799	HIF1A.p2	AF022110|Itgb5|16419|integrin beta 5	NM_001145884|Itgb5|16419|integrin beta 5	NM_010580|Itgb5|16419|integrin beta 5	BC058246|Itgb5|16419|integrin beta 5	AK143532|Itgb5|16419|integrin beta 5	AK140251|Itgb5|16419|integrin beta 5	BC046280|Itgb5|16419|integrin beta 5	AF043256|Itgb5|16419|integrin beta 5	AF043257|Itgb5|16419|integrin beta 5	AK087476|Itgb5|16419|integrin beta 5
mm9_v1_chr11_+_74739357_74739420	0.0785503	HIF1A.p2	BC047279|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC066040|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001002764|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC077715|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC016550|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr1_-_90598450_90598583	0.0785119	HIF1A.p2	BC049804|Arl4c|320982|ADP-ribosylation factor-like 4C
mm9_v1_chr17_+_24889931_24889960	0.0768389	HIF1A.p2	AK146974|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	AY574375|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	NM_001012402|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC132520|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC138814|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC145424|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6
mm9_v1_chr12_+_33639071_33639140	0.0761506	HIF1A.p2	AK049545|Sypl|19027|synaptophysin-like protein	AK049556|Sypl|19027|synaptophysin-like protein	AK030703|Sypl|19027|synaptophysin-like protein	AK159382|Sypl|19027|synaptophysin-like protein	AK159929|Sypl|19027|synaptophysin-like protein	AK033303|Sypl|19027|synaptophysin-like protein	AK167617|Sypl|19027|synaptophysin-like protein	AK052556|Sypl|19027|synaptophysin-like protein	AK154051|Sypl|19027|synaptophysin-like protein
mm9_v1_chr2_+_30663433_30663516	0.0749519	HIF1A.p2	AK009056|Mettl11a|66617|methyltransferase like 11A	AK011888|Mettl11a|66617|methyltransferase like 11A	AK154783|Mettl11a|66617|methyltransferase like 11A	AK011960|Mettl11a|66617|methyltransferase like 11A	BC027220|Mettl11a|66617|methyltransferase like 11A	NM_170592|Mettl11a|66617|methyltransferase like 11A
mm9_v1_chr12_+_88488691_88488760	0.0746368	HIF1A.p2	AK002398|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	AK075927|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	AF093418|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr5_+_53225301_53225438	0.0743467	HIF1A.p2	AK168897|Anapc4|52206|anaphase promoting complex subunit 4	AK148625|Anapc4|52206|anaphase promoting complex subunit 4	BC024870|Anapc4|52206|anaphase promoting complex subunit 4	NM_024213|Anapc4|52206|anaphase promoting complex subunit 4	AK146000|Anapc4|52206|anaphase promoting complex subunit 4	AK168031|Anapc4|52206|anaphase promoting complex subunit 4	AK088759|Anapc4|52206|anaphase promoting complex subunit 4	BC016237|Anapc4|52206|anaphase promoting complex subunit 4
mm9_v1_chr5_+_66155358_66155411	0.0738691	HIF1A.p2	AK173167|N4bp2|333789|NEDD4 binding protein 2
mm9_v1_chr1_+_63223689_63223722	0.0727782	HIF1A.p2	BC039635|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK027911|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK168191|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC023139|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	AK012756|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2	BC003899|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr15_-_96473193_96473343	0.0723895	HIF1A.p2	AK162612|Slc38a1|105727|solute carrier family 38, member 1	AK081724|Slc38a1|105727|solute carrier family 38, member 1	NM_001166458|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr4_+_116480325_116480357	0.0711511	HIF1A.p2	NM_001159581|Mutyh|70603|mutY homolog (E. coli)	NM_133250|Mutyh|70603|mutY homolog (E. coli)	AK077546|Mutyh|70603|mutY homolog (E. coli)	AK156790|Mutyh|70603|mutY homolog (E. coli)	AK017730|Mutyh|70603|mutY homolog (E. coli)	AB117939|Mutyh|70603|mutY homolog (E. coli)	BC057942|Mutyh|70603|mutY homolog (E. coli)
mm9_v1_chr4_+_120339167_120339220	0.0701519	HIF1A.p2	NM_019563|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK012136|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK154030|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC025116|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC080723|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AF143369|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132360|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132362|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4
mm9_v1_chr19_+_10092665_10092824	0.0696308	HIF1A.p2	NM_144538|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1	AK004767|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1	BC020147|Rab3il1|74760|RAB3A interacting protein (rabin3)-like 1
mm9_v1_chr15_-_75672300_75672387	0.0691113	HIF1A.p2	BC060682|Zc3h3|223642|zinc finger CCCH type containing 3	AJ516034|Zc3h3|223642|zinc finger CCCH type containing 3	BC111448|Zc3h3|223642|zinc finger CCCH type containing 3	NM_172121|Zc3h3|223642|zinc finger CCCH type containing 3	AK138281|Zc3h3|223642|zinc finger CCCH type containing 3
mm9_v1_chr13_+_31717603_31717684	0.0672236	HIF1A.p2	AK132385|Foxf2|14238|forkhead box F2	NM_010225|Foxf2|14238|forkhead box F2
mm9_v1_chr6_-_99616745_99616839	0.066775	HIF1A.p2	AY628329|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK007268|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	BC027014|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK005054|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	NM_025829|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3	AK035794|Eif4e3|66892|eukaryotic translation initiation factor 4E member 3
mm9_v1_chr4_-_22415277_22415277	0.0651939	HIF1A.p2	NM_008899|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr8_-_8661238_8661245	0.0646267	HIF1A.p2	AK132512|Efnb2|13642|ephrin B2	AK134108|Efnb2|13642|ephrin B2	AK143059|Efnb2|13642|ephrin B2	AK142203|Efnb2|13642|ephrin B2	AK142283|Efnb2|13642|ephrin B2
mm9_v1_chr11_+_120319420_120319456	0.064498	HIF1A.p2	AK156682|Ccdc137|67291|coiled-coil domain containing 137	NM_152807|Ccdc137|67291|coiled-coil domain containing 137	BC026662|Ccdc137|67291|coiled-coil domain containing 137
mm9_v1_chr13_+_32893989_32894122	0.0633515	HIF1A.p2	AB056151|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr11_+_4118227_4118272	0.0630597	HIF1A.p2	AK170245|Gatsl3|71962|GATS protein-like 3	BC039988|Gatsl3|71962|GATS protein-like 3	NM_028022|Gatsl3|71962|GATS protein-like 3	AK010455|Gatsl3|71962|GATS protein-like 3
mm9_v1_chr9_+_77602582_77602622	0.0618332	HIF1A.p2	AK160876|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	BC019374|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	NM_010295|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	U85414|Gclc|14629|glutamate-cysteine ligase, catalytic subunit	U85498|Gclc|14629|glutamate-cysteine ligase, catalytic subunit
mm9_v1_chr4_+_153516477_153516537	0.0618103	HIF1A.p2	NM_021499|Wdr8|59002|WD repeat domain 8	AK156969|Wdr8|59002|WD repeat domain 8	AK172690|Wdr8|59002|WD repeat domain 8	AB034911|Wdr8|59002|WD repeat domain 8	AK160331|Wdr8|59002|WD repeat domain 8	AK011773|Wdr8|59002|WD repeat domain 8	BC016120|Wdr8|59002|WD repeat domain 8	AK051688|Wdr8|59002|WD repeat domain 8
mm9_v1_chr9_+_100978450_100978485	0.0615496	HIF1A.p2	NM_001100451|Msl2|77853|male-specific lethal 2 homolog (Drosophila)	BC070432|Msl2|77853|male-specific lethal 2 homolog (Drosophila)
mm9_v1_chr15_+_73555336_73555359	0.0612541	HIF1A.p2	BC066043|Ptp4a3|19245|protein tyrosine phosphatase 4a3	NM_001166388|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr5_-_33972218_33972258	0.0610297	HIF1A.p2	AK010537|Fam53a|74504|family with sequence similarity 53, member A	AK155077|Fam53a|74504|family with sequence similarity 53, member A	AK086386|Fam53a|74504|family with sequence similarity 53, member A	AK163326|Fam53a|74504|family with sequence similarity 53, member A
mm9_v1_chr5_+_119010687_119010751	0.0603012	HIF1A.p2	AK088795|Med13l|76199|mediator complex subunit 13-like	NM_172424|Med13l|76199|mediator complex subunit 13-like	AK154895|Med13l|76199|mediator complex subunit 13-like	AY338464|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr2_+_180317427_180317498	0.0601847	HIF1A.p2	AK052575|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC085320|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	AK038431|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	AK005551|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC042508|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC110993|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC054431|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene
mm9_v1_chr9_+_56798705_56798743	0.0598717	HIF1A.p2	AK002717|Snupn|66069|snurportin 1	AK155315|Snupn|66069|snurportin 1	AK013151|Snupn|66069|snurportin 1	BC061258|Snupn|66069|snurportin 1	BC049638|Snupn|66069|snurportin 1	NM_178374|Snupn|66069|snurportin 1
mm9_v1_chr13_-_96145269_96145292	0.0595603	HIF1A.p2	AK017248|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008168|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008174|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008399|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AY500995|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	BC052410|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	NM_025630|Aggf1|66549|angiogenic factor with G patch and FHA domains 1
mm9_v1_chr11_-_21271158_21271203	0.0595158	HIF1A.p2	AK213550|Ugp2|216558|UDP-glucose pyrophosphorylase 2	BC025585|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr7_+_147129687_147129754	0.0593673	HIF1A.p2	AK131968|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AK010589|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AY606111|Utf1|22286|undifferentiated embryonic cell transcription factor 1	AK010280|Utf1|22286|undifferentiated embryonic cell transcription factor 1	BC138841|Utf1|22286|undifferentiated embryonic cell transcription factor 1	BC138842|Utf1|22286|undifferentiated embryonic cell transcription factor 1	D31647|Utf1|22286|undifferentiated embryonic cell transcription factor 1	NM_009482|Utf1|22286|undifferentiated embryonic cell transcription factor 1
mm9_v1_chr10_+_127759640_127759648	0.0572014	HIF1A.p2	AK013014|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK019927|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr18_+_60685866_60685974	0.0571626	HIF1A.p2	AK162552|Dctn4|67665|dynactin 4	AK168484|Dctn4|67665|dynactin 4	AK160813|Dctn4|67665|dynactin 4	AK050896|Dctn4|67665|dynactin 4	AK019382|Dctn4|67665|dynactin 4	BC034725|Dctn4|67665|dynactin 4	NM_026302|Dctn4|67665|dynactin 4	AK141855|Dctn4|67665|dynactin 4	AK003238|Dctn4|67665|dynactin 4	AK089264|Dctn4|67665|dynactin 4	BC006677|Dctn4|67665|dynactin 4	AK177969|Dctn4|67665|dynactin 4	AK197489|Dctn4|67665|dynactin 4
mm9_v1_chr4_-_129419450_129419570	0.0567875	HIF1A.p2	BC002051|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	U17046|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK146815|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	U17961|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK150687|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK152084|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	NM_011317|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK044927|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK050520|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1	AK137122|Khdrbs1|20218|KH domain containing, RNA binding, signal transduction associated 1
mm9_v1_chr17_+_25032050_25032109	0.0564122	HIF1A.p2	NM_023260|Mrps34|79044|mitochondrial ribosomal protein S34	AK002285|Mrps34|79044|mitochondrial ribosomal protein S34	AK019922|Mrps34|79044|mitochondrial ribosomal protein S34	AK007337|Mrps34|79044|mitochondrial ribosomal protein S34	AK004049|Mrps34|79044|mitochondrial ribosomal protein S34	BC024336|Mrps34|79044|mitochondrial ribosomal protein S34
mm9_v1_chr5_+_110564841_110564902	0.056273	HIF1A.p2	NM_172717|Chfr|231600|checkpoint with forkhead and ring finger domains	AK039281|Chfr|231600|checkpoint with forkhead and ring finger domains	AK133154|Chfr|231600|checkpoint with forkhead and ring finger domains	AK154038|Chfr|231600|checkpoint with forkhead and ring finger domains	AK048930|Chfr|231600|checkpoint with forkhead and ring finger domains	AK147892|Chfr|231600|checkpoint with forkhead and ring finger domains	AK077629|Chfr|231600|checkpoint with forkhead and ring finger domains	AK148436|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155295|Chfr|231600|checkpoint with forkhead and ring finger domains	AK155525|Chfr|231600|checkpoint with forkhead and ring finger domains	AK052473|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169193|Chfr|231600|checkpoint with forkhead and ring finger domains	BC049792|Chfr|231600|checkpoint with forkhead and ring finger domains	AK169182|Chfr|231600|checkpoint with forkhead and ring finger domains
mm9_v1_chr10_-_114688480_114688548	0.0552253	HIF1A.p2	AK014477|Tbc1d15|66687|TBC1 domain family, member 15	AK078875|Tbc1d15|66687|TBC1 domain family, member 15	AK147085|Tbc1d15|66687|TBC1 domain family, member 15	BC053395|Tbc1d15|66687|TBC1 domain family, member 15	NM_025706|Tbc1d15|66687|TBC1 domain family, member 15
mm9_v1_chr2_+_91366966_91366992	0.0551351	HIF1A.p2	AK014169|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr11_-_31269867_31269907	0.0550264	HIF1A.p2	AK002527|Stc2|20856|stanniocalcin 2	AK010318|Stc2|20856|stanniocalcin 2	BC012206|Stc2|20856|stanniocalcin 2	AF056244|Stc2|20856|stanniocalcin 2
mm9_v1_chr6_-_97010364_97010406	0.0538791	HIF1A.p2	BC089490|Fam19a4|320701|family with sequence similarity 19, member A4	AK081531|Fam19a4|320701|family with sequence similarity 19, member A4	AK084114|Fam19a4|320701|family with sequence similarity 19, member A4	NM_177233|Fam19a4|320701|family with sequence similarity 19, member A4	AK149355|Fam19a4|320701|family with sequence similarity 19, member A4
mm9_v1_chr10_+_93661746_93661761	0.0532019	HIF1A.p2	BC086922|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	AK010460|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	NM_025551|Ndufa12|66414|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
mm9_v1_chr15_+_34236408_34236565	0.0510215	HIF1A.p2	AK035102|Matn2|17181|matrilin 2	NM_016762|Matn2|17181|matrilin 2	AK083151|Matn2|17181|matrilin 2	AK138211|Matn2|17181|matrilin 2	U69262|Matn2|17181|matrilin 2	AK163818|Matn2|17181|matrilin 2	AK081339|Matn2|17181|matrilin 2	BC092298|Matn2|17181|matrilin 2	BC005429|Matn2|17181|matrilin 2
mm9_v1_chr11_+_98273930_98273964	0.046329	HIF1A.p2	AK031099|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	AK083669|Erbb2|13866|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)
mm9_v1_chr8_-_35209773_35209872	0.0459238	HIF1A.p2	AK159401|Leprotl1|68192|leptin receptor overlapping transcript-like 1	BC004677|Leprotl1|68192|leptin receptor overlapping transcript-like 1	NM_026609|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK003329|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK153277|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK075740|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK150289|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK154712|Leprotl1|68192|leptin receptor overlapping transcript-like 1	AK013870|Leprotl1|68192|leptin receptor overlapping transcript-like 1
mm9_v1_chr14_-_32064403_32064537	0.04578	HIF1A.p2	AK005852|Phf7|71838|PHD finger protein 7	NM_027949|Phf7|71838|PHD finger protein 7	AK005673|Phf7|71838|PHD finger protein 7	AK148191|Phf7|71838|PHD finger protein 7	BC049113|Phf7|71838|PHD finger protein 7
mm9_v1_chr19_-_7008874_7009004	0.0456473	HIF1A.p2	BC119784|Kcnk4|16528|potassium channel, subfamily K, member 4	NM_008431|Kcnk4|16528|potassium channel, subfamily K, member 4
mm9_v1_chr10_-_120416369_120416397	0.0455618	HIF1A.p2	AF112300|Lemd3|380664|LEM domain containing 3	NM_001081193|Lemd3|380664|LEM domain containing 3
mm9_v1_chr11_-_117641951_117641998	0.045478	HIF1A.p2	AK090179|Tmc6|217353|transmembrane channel-like gene family 6	NM_145439|Tmc6|217353|transmembrane channel-like gene family 6
mm9_v1_chr8_+_113618490_113618567	0.0446992	HIF1A.p2	AK129472|Pdpr|319518|pyruvate dehydrogenase phosphatase regulatory subunit	AK029575|Pdpr|319518|pyruvate dehydrogenase phosphatase regulatory subunit
mm9_v1_chr1_-_74998017_74998079	0.0444335	HIF1A.p2	AK090147|Ihh|16147|Indian hedgehog	U85610|Ihh|16147|Indian hedgehog
mm9_v1_chr10_-_61246611_61246701	0.0434341	HIF1A.p2	AF336305|H2afy2|404634|H2A histone family, member Y2	NM_207000|H2afy2|404634|H2A histone family, member Y2	BC045140|H2afy2|404634|H2A histone family, member Y2	AK165020|H2afy2|404634|H2A histone family, member Y2	AK018355|H2afy2|404634|H2A histone family, member Y2	BC046794|H2afy2|404634|H2A histone family, member Y2	AK078464|H2afy2|404634|H2A histone family, member Y2	AK032636|H2afy2|404634|H2A histone family, member Y2	AK020744|H2afy2|404634|H2A histone family, member Y2
mm9_v1_chr1_+_57463594_57463619	0.0431039	HIF1A.p2	AK165130|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	AK007831|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	BC071241|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr11_-_95375552_95375640	0.0419137	HIF1A.p2	AK038955|Nxph3|104079|neurexophilin 3	BC007167|Nxph3|104079|neurexophilin 3
mm9_v1_chr7_-_80520624_80520679	0.0415325	HIF1A.p2	AK053954|A730056A06Rik|319783|RIKEN cDNA A730056A06 gene	AK043101|A730056A06Rik|319783|RIKEN cDNA A730056A06 gene
mm9_v1_chr2_-_147872704_147872704	0.0412539	HIF1A.p2	NM_010446|Foxa2|15376|forkhead box A2	X74937|Foxa2|15376|forkhead box A2
mm9_v1_chr5_+_36235967_36236084	0.0410754	HIF1A.p2	BC050814|Afap1|70292|actin filament associated protein 1	NM_027373|Afap1|70292|actin filament associated protein 1	AK161385|Afap1|70292|actin filament associated protein 1	AK080756|Afap1|70292|actin filament associated protein 1	AK129483|Afap1|70292|actin filament associated protein 1	AK147706|Afap1|70292|actin filament associated protein 1
mm9_v1_chr19_+_47253309_47253309	0.0404042	HIF1A.p2	BC099702|Neurl1a|18011|neuralized homolog 1A (Drosophila)	NM_021360|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr1_-_91827726_91827753	0.0400679	HIF1A.p2	L39770|Gbx2|14472|gastrulation brain homeobox 2	NM_010262|Gbx2|14472|gastrulation brain homeobox 2	Z48800|Gbx2|14472|gastrulation brain homeobox 2	BC050989|Gbx2|14472|gastrulation brain homeobox 2
mm9_v1_chr17_+_29405732_29405781	0.0392731	HIF1A.p2	NM_030561|BC004004|80748|cDNA sequence BC004004
mm9_v1_chr2_+_75497282_75497379	0.0392637	HIF1A.p2	NM_053263|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	NM_146130|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	NM_198090|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK133860|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK010481|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC038364|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AK169663|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AB201711|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC057655|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC062198|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	AF463524|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC116250|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC116251|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC157904|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC157919|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC158038|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC158074|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC172011|Gm6793|627828|heterogeneous nuclear ribonucleoprotein A3 pseudogene	BC023908|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3	BC064824|Hnrnpa3|229279|heterogeneous nuclear ribonucleoprotein A3
mm9_v1_chr3_+_107081775_107081924	0.038041	HIF1A.p2	NM_026774|Hbxip|68576|hepatitis B virus x interacting protein	AK146289|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr18_-_24761954_24762029	0.0377165	HIF1A.p2	BC055012|Slc39a6|106957|solute carrier family 39 (metal ion transporter), member 6
mm9_v1_chr7_-_20382130_20382174	0.0370647	HIF1A.p2	AF319956|Cblc|80794|Casitas B-lineage lymphoma c	BC046337|Cblc|80794|Casitas B-lineage lymphoma c	BC111037|Cblc|80794|Casitas B-lineage lymphoma c	AK009399|Cblc|80794|Casitas B-lineage lymphoma c	AK010200|Cblc|80794|Casitas B-lineage lymphoma c	AK010228|Cblc|80794|Casitas B-lineage lymphoma c	NM_001161844|Cblc|80794|Casitas B-lineage lymphoma c	NM_023224|Cblc|80794|Casitas B-lineage lymphoma c
mm9_v1_chr15_+_100299408_100299504	0.0365524	HIF1A.p2	NM_134093|Letmd1|68614|LETM1 domain containing 1	AK158718|Letmd1|68614|LETM1 domain containing 1
mm9_v1_chr3_-_89153857_89153933	0.0359777	HIF1A.p2	AK151804|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK152725|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK152954|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK152973|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	BC009132|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK020649|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AF006196|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	BC057909|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK170101|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK149796|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK039384|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK142520|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK170365|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK149684|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	AK048901|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	NM_001037722|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)	NM_009614|Adam15|11490|a disintegrin and metallopeptidase domain 15 (metargidin)
mm9_v1_chr1_+_62750471_62750778	0.0350964	HIF1A.p2	AK153553|Nrp2|18187|neuropilin 2	BC057028|Nrp2|18187|neuropilin 2	BC098200|Nrp2|18187|neuropilin 2	AF483506|Nrp2|18187|neuropilin 2	AF483507|Nrp2|18187|neuropilin 2
mm9_v1_chr3_+_107081927_107081986	0.0349919	HIF1A.p2	AK003358|Hbxip|68576|hepatitis B virus x interacting protein	BC028547|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr15_-_96472600_96472827	0.0349781	HIF1A.p2	AK040250|Slc38a1|105727|solute carrier family 38, member 1	AK029189|Slc38a1|105727|solute carrier family 38, member 1	BC066815|Slc38a1|105727|solute carrier family 38, member 1	BC030378|Slc38a1|105727|solute carrier family 38, member 1	AK049173|Slc38a1|105727|solute carrier family 38, member 1	AK050914|Slc38a1|105727|solute carrier family 38, member 1	AK082683|Slc38a1|105727|solute carrier family 38, member 1	NM_001166456|Slc38a1|105727|solute carrier family 38, member 1
mm9_v1_chr6_-_72908352_72908476	0.0347961	HIF1A.p2	BC089326|Tmsb10|19240|thymosin, beta 10	BC145877|Tmsb10|19240|thymosin, beta 10	BC145879|Tmsb10|19240|thymosin, beta 10	BC094284|Tmsb10|19240|thymosin, beta 10	BC070416|Tmsb10|19240|thymosin, beta 10	BC048070|Tmsb10|19240|thymosin, beta 10	BC037153|Tmsb10|19240|thymosin, beta 10	BC080312|Tmsb10|19240|thymosin, beta 10	BC099374|Tmsb10|19240|thymosin, beta 10	BC093587|Tmsb10|19240|thymosin, beta 10	BC059777|Tmsb10|19240|thymosin, beta 10	BC092009|Tmsb10|19240|thymosin, beta 10	BC038926|Tmsb10|19240|thymosin, beta 10	AK019232|Tmsb10|19240|thymosin, beta 10	AK003178|Tmsb10|19240|thymosin, beta 10	AK005512|Tmsb10|19240|thymosin, beta 10	AK008557|Tmsb10|19240|thymosin, beta 10	AK012361|Tmsb10|19240|thymosin, beta 10	AK019212|Tmsb10|19240|thymosin, beta 10	AK131711|Tmsb10|19240|thymosin, beta 10	AK161987|Tmsb10|19240|thymosin, beta 10	NM_025284|Tmsb10|19240|thymosin, beta 10
mm9_v1_chr3_-_83844042_83844096	0.0344301	HIF1A.p2	AY662647|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK053888|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK051240|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK137619|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	BC062940|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK052409|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK153996|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK154818|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	NM_172681|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene	AK086232|D930015E06Rik|229473|RIKEN cDNA D930015E06 gene
mm9_v1_chr5_+_31554072_31554103	0.0329741	HIF1A.p2	BC016516|Krtcap3|69815|keratinocyte associated protein 3	NM_027221|Krtcap3|69815|keratinocyte associated protein 3	AK007999|Krtcap3|69815|keratinocyte associated protein 3	BC107024|Krtcap3|69815|keratinocyte associated protein 3	BC107025|Krtcap3|69815|keratinocyte associated protein 3	BC027812|Krtcap3|69815|keratinocyte associated protein 3
mm9_v1_chr10_-_127103595_127103798	0.0292942	HIF1A.p2	AK171180|Nab2|17937|Ngfi-A binding protein 2	BC045139|Nab2|17937|Ngfi-A binding protein 2	AK155501|Nab2|17937|Ngfi-A binding protein 2	AK158688|Nab2|17937|Ngfi-A binding protein 2	U47543|Nab2|17937|Ngfi-A binding protein 2	NM_001122895|Nab2|17937|Ngfi-A binding protein 2	NM_008668|Nab2|17937|Ngfi-A binding protein 2
mm9_v1_chr14_+_55082960_55083081	0.0276155	HIF1A.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr7_-_72516109_72516162	0.0270969	HIF1A.p2	D14340|Tjp1|21872|tight junction protein 1	NM_001163574|Tjp1|21872|tight junction protein 1	NM_009386|Tjp1|21872|tight junction protein 1
mm9_v1_chr10_-_53795485_53795553	0.0268273	HIF1A.p2	AK186378|Man1a|17155|mannosidase 1, alpha	BC015265|Man1a|17155|mannosidase 1, alpha	AK028996|Man1a|17155|mannosidase 1, alpha	AK042371|Man1a|17155|mannosidase 1, alpha	AK148407|Man1a|17155|mannosidase 1, alpha	AK154820|Man1a|17155|mannosidase 1, alpha	AK171841|Man1a|17155|mannosidase 1, alpha	AK043932|Man1a|17155|mannosidase 1, alpha	AK172376|Man1a|17155|mannosidase 1, alpha	AK172667|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr16_+_8637799_8637865	0.0259214	HIF1A.p2	AF043514|Pmm2|54128|phosphomannomutase 2	NM_016881|Pmm2|54128|phosphomannomutase 2	AK012683|Pmm2|54128|phosphomannomutase 2	AK005074|Pmm2|54128|phosphomannomutase 2	AK002858|Pmm2|54128|phosphomannomutase 2	AK162626|Pmm2|54128|phosphomannomutase 2	BC037101|Pmm2|54128|phosphomannomutase 2	BC094448|Pmm2|54128|phosphomannomutase 2	AK149116|Pmm2|54128|phosphomannomutase 2	AK003334|Pmm2|54128|phosphomannomutase 2	AK134850|Pmm2|54128|phosphomannomutase 2	AK145402|Pmm2|54128|phosphomannomutase 2	BC046325|Pmm2|54128|phosphomannomutase 2
mm9_v1_chr14_-_63864060_63864107	0.0251194	HIF1A.p2	M98339|Gata4|14463|GATA binding protein 4	U85046|Gata4|14463|GATA binding protein 4	NM_008092|Gata4|14463|GATA binding protein 4	AB075549|Gata4|14463|GATA binding protein 4
mm9_v1_chr7_-_31741729_31741777	0.0245417	HIF1A.p2	AK146871|Usf2|22282|upstream transcription factor 2	AB221562|Usf2|22282|upstream transcription factor 2
mm9_v1_chr19_-_5924796_5924818	0.0212372	HIF1A.p2	AK083004|Cdc42ep2|104252|CDC42 effector protein (Rho GTPase binding) 2
mm9_v1_chr5_+_30950295_30950374	0.0196693	HIF1A.p2	NM_175675|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK015555|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK169121|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK037237|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	BC019457|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK077623|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK151122|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK051359|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK149968|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK049408|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK169163|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene	AK159707|4930471M23Rik|74919|RIKEN cDNA 4930471M23 gene
mm9_v1_chr7_+_25669603_25669732	0.019625	HIF1A.p2	AK013524|Rps19|20085|ribosomal protein S19	AK031403|Rps19|20085|ribosomal protein S19	BC086938|Rps19|20085|ribosomal protein S19	AK012052|Rps19|20085|ribosomal protein S19	AK028244|Rps19|20085|ribosomal protein S19	BC034506|Rps19|20085|ribosomal protein S19	AK018725|Rps19|20085|ribosomal protein S19	NM_023133|Rps19|20085|ribosomal protein S19
mm9_v1_chrX_-_13423666_13423727	0.0195612	HIF1A.p2	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr1_+_59970358_59970454	0.0192601	HIF1A.p2	BC080299|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chr9_-_62996767_62996767	0.019116	HIF1A.p2	AK029916|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163758|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr14_+_122874625_122874656	0.0180825	HIF1A.p2	D70848|Zic2|22772|zinc finger protein of the cerebellum 2
mm9_v1_chr17_-_8020162_8020169	0.0161825	HIF1A.p2	
mm9_v1_chr9_+_108419410_108419495	0.0159255	HIF1A.p2	NM_001114119|Qrich1|69232|glutamine-rich 1	NM_175143|Qrich1|69232|glutamine-rich 1	AK083212|Qrich1|69232|glutamine-rich 1	BC006738|Qrich1|69232|glutamine-rich 1	AK151491|Qrich1|69232|glutamine-rich 1	AK151530|Qrich1|69232|glutamine-rich 1	BC120915|Qrich1|69232|glutamine-rich 1	BC120916|Qrich1|69232|glutamine-rich 1
mm9_v1_chr16_-_38550174_38550326	0.0158971	HIF1A.p2	AK197458|Poglut1|224143|protein O-glucosyltransferase 1	AK215456|Poglut1|224143|protein O-glucosyltransferase 1	AK216766|Poglut1|224143|protein O-glucosyltransferase 1	AK036224|Poglut1|224143|protein O-glucosyltransferase 1	NM_172380|Poglut1|224143|protein O-glucosyltransferase 1	AK031608|Poglut1|224143|protein O-glucosyltransferase 1	AK041321|Poglut1|224143|protein O-glucosyltransferase 1	AK045278|Poglut1|224143|protein O-glucosyltransferase 1	AK035948|Poglut1|224143|protein O-glucosyltransferase 1	BC026809|Poglut1|224143|protein O-glucosyltransferase 1	AK082556|Poglut1|224143|protein O-glucosyltransferase 1	AK167641|Poglut1|224143|protein O-glucosyltransferase 1	AK079886|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr9_-_119002601_119002619	0.0155858	HIF1A.p2	AF133125|Plcd1|18799|phospholipase C, delta 1	AK082890|Plcd1|18799|phospholipase C, delta 1	NM_019676|Plcd1|18799|phospholipase C, delta 1	U85711|Plcd1|18799|phospholipase C, delta 1	AK028749|Plcd1|18799|phospholipase C, delta 1
mm9_v1_chr6_+_49269351_49269403	0.0153352	HIF1A.p2	AK018135|Ccdc126|57895|coiled-coil domain containing 126	NM_175098|Ccdc126|57895|coiled-coil domain containing 126	BC117837|Ccdc126|57895|coiled-coil domain containing 126
mm9_v1_chr4_-_9596035_9596119	0.0137039	HIF1A.p2	AF223414|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr10_+_127759711_127759783	0.0129614	HIF1A.p2	AK213625|Cnpy2|56530|canopy 2 homolog (zebrafish)	BC008261|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK007914|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK013568|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK180663|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr3_+_89577436_89577810	0.012652	HIF1A.p2	NM_027315|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AY112699|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AY945937|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1	AK146707|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr1_-_163181313_163181346	0.0114948	HIF1A.p2	AK157820|Prdx6|11758|peroxiredoxin 6	Y12883|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr7_-_52252911_52252974	0.0107305	HIF1A.p2	AK013411|Bcl2l12|75736|BCL2-like 12 (proline rich)	AK017362|Bcl2l12|75736|BCL2-like 12 (proline rich)	NM_029410|Bcl2l12|75736|BCL2-like 12 (proline rich)
mm9_v1_chr4_-_126106749_126106807	0.0107178	HIF1A.p2	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr11_+_77796714_77796777	0.0099845	HIF1A.p2	BC043080|Phf12|268448|PHD finger protein 12
mm9_v1_chr9_+_108250153_108250277	0.00983124	HIF1A.p2	NM_011678|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK169372|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK169933|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK171271|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	L00681|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK149964|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK220512|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK171633|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK138838|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK143582|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC011341|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC066180|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC066865|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)
mm9_v1_chr4_+_33397279_33397404	0.00905329	HIF1A.p2	AK151463|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	NM_011884|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK150497|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160007|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK002922|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK079488|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK142016|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160706|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	BC043657|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK169305|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF034568|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF025653|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase
mm9_v1_chr9_-_56995928_56996111	0.00807385	HIF1A.p2	AK155405|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	AK013322|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC043297|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC034873|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)
mm9_v1_chr16_+_13671936_13672057	0.00768583	HIF1A.p2	NM_001177552|Bfar|67118|bifunctional apoptosis regulator	NM_025976|Bfar|67118|bifunctional apoptosis regulator	AK013950|3110001I22Rik|66598|RIKEN cDNA 3110001I22 gene	AK041839|Bfar|67118|bifunctional apoptosis regulator
mm9_v1_chr3_-_97672119_97672138	0.00594185	HIF1A.p2	AK083867|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	AK051209|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr9_+_81757308_81757350	0.00535747	HIF1A.p2	BC096613|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK082395|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK166209|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	AK043929|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)	NM_175213|Mei4|75033|meiosis-specific, MEI4 homolog (S. cerevisiae)
mm9_v1_chr4_+_143002328_143002328	0.00241589	HIF1A.p2	AK029142|Pramef8|242736|PRAME family member 8	NM_172877|Pramef8|242736|PRAME family member 8
mm9_v1_chr9_-_70351160_70351184	0.0019643	HIF1A.p2	BC069835|Rnf111|93836|ring finger 111	AK169999|Rnf111|93836|ring finger 111
mm9_v1_chr14_-_32898727_32898850	0.00187964	HIF1A.p2	AK048097|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	BC029910|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	BC039954|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	AK011448|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	AK017764|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	NM_001047433|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)	NM_172254|Dph3|105638|DPH3 homolog (KTI11, S. cerevisiae)
mm9_v1_chr3_-_75760820_75760839	0.00186175	HIF1A.p2	AK149286|Golim4|73124|golgi integral membrane protein 4
mm9_v1_chr9_+_54997159_54997206	0.00160303	HIF1A.p2	AK042515|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	NM_180600|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2	AK083216|Ube2q2|109161|ubiquitin-conjugating enzyme E2Q (putative) 2
mm9_v1_chr9_-_119002573_119002594	0.00146048	HIF1A.p2	BC015249|Plcd1|18799|phospholipase C, delta 1	BC025798|Plcd1|18799|phospholipase C, delta 1
mm9_v1_chr11_-_3813644_3813898	0.000592673	HIF1A.p2	BC020181|Slc35e4|103710|solute carrier family 35, member E4	BC095957|Slc35e4|103710|solute carrier family 35, member E4
mm9_v1_chr18_+_51277551_51277576	0.00042084	HIF1A.p2	BC132481|Prr16|71373|proline rich 16	NM_001081224|Prr16|71373|proline rich 16	AK081911|Prr16|71373|proline rich 16
mm9_v1_chr16_+_58670320_58670440	0.000197124	HIF1A.p2	NM_007757|Cpox|12892|coproporphyrinogen oxidase	D16333|Cpox|12892|coproporphyrinogen oxidase	AK157277|Cpox|12892|coproporphyrinogen oxidase
