mm9_v1_chr11_+_11586215_11586246	27.1248	HMX1.p2	NM_001025597|Ikzf1|22778|IKAROS family zinc finger 1	NM_009578|Ikzf1|22778|IKAROS family zinc finger 1	AK036833|Ikzf1|22778|IKAROS family zinc finger 1	AK040268|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr8_+_90796301_90796301	18.0018	HMX1.p2	NM_007406|Adcy7|11513|adenylate cyclase 7	U12919|Adcy7|11513|adenylate cyclase 7
mm9_v1_chrX_-_7248403_7248534	17.5058	HMX1.p2	BC119088|Plp2|18824|proteolipid protein 2	BC119090|Plp2|18824|proteolipid protein 2	NM_019755|Plp2|18824|proteolipid protein 2	AB031292|Plp2|18824|proteolipid protein 2	BC092095|Plp2|18824|proteolipid protein 2	BC083078|Plp2|18824|proteolipid protein 2	AK011282|Plp2|18824|proteolipid protein 2	AK003522|Plp2|18824|proteolipid protein 2	AK154228|Plp2|18824|proteolipid protein 2	AK012816|Plp2|18824|proteolipid protein 2
mm9_v1_chr11_+_68245608_68245745	17.4712	HMX1.p2	AK089483|Pik3r5|320207|phosphoinositide-3-kinase, regulatory subunit 5, p101	AK089348|Pik3r5|320207|phosphoinositide-3-kinase, regulatory subunit 5, p101	AK171279|Pik3r5|320207|phosphoinositide-3-kinase, regulatory subunit 5, p101	NM_177320|Pik3r5|320207|phosphoinositide-3-kinase, regulatory subunit 5, p101	AK154643|Pik3r5|320207|phosphoinositide-3-kinase, regulatory subunit 5, p101	AK149847|Pik3r5|320207|phosphoinositide-3-kinase, regulatory subunit 5, p101
mm9_v1_chr6_-_91066773_91066797	14.25	HMX1.p2	AK173056|Nup210|54563|nucleoporin 210	AF113751|Nup210|54563|nucleoporin 210	AK077812|Nup210|54563|nucleoporin 210
mm9_v1_chr6_-_91066809_91066837	14.1495	HMX1.p2	AK157272|Nup210|54563|nucleoporin 210	BC052468|Nup210|54563|nucleoporin 210	AK053417|Nup210|54563|nucleoporin 210	NM_018815|Nup210|54563|nucleoporin 210
mm9_v1_chr3_-_54538938_54538996	13.0205	HMX1.p2	AJ505005|Exosc8|69639|exosome component 8	AK009584|Exosc8|69639|exosome component 8	AK165758|Exosc8|69639|exosome component 8	BC004769|Exosc8|69639|exosome component 8
mm9_v1_chr17_+_35331446_35331471	12.9795	HMX1.p2	NM_008518|Ltb|16994|lymphotoxin B	U16985|Ltb|16994|lymphotoxin B	BC064062|Ltb|16994|lymphotoxin B	BC114919|Ltb|16994|lymphotoxin B
mm9_v1_chr17_-_36282006_36282154	11.9851	HMX1.p2	J00393|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr11_+_3190334_3190510	11.2462	HMX1.p2	AK166189|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC043035|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	AB029397|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	NM_019574|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr1_+_52065469_52065543	11.1585	HMX1.p2	AK037598|Stat4|20849|signal transducer and activator of transcription 4	AK157083|Stat4|20849|signal transducer and activator of transcription 4	U06923|Stat4|20849|signal transducer and activator of transcription 4	BC052907|Stat4|20849|signal transducer and activator of transcription 4	BC098499|Stat4|20849|signal transducer and activator of transcription 4
mm9_v1_chr6_-_124683046_124683171	10.9173	HMX1.p2	M90389|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK151077|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK151623|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	BC012660|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK159833|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	M68902|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK167923|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK159686|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	NM_013545|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6	AK169804|Ptpn6|15170|protein tyrosine phosphatase, non-receptor type 6
mm9_v1_chr2_+_152934184_152934350	10.8287	HMX1.p2	NM_001172117|Hck|15162|hemopoietic cell kinase	NM_010407|Hck|15162|hemopoietic cell kinase	AK150709|Hck|15162|hemopoietic cell kinase	AK150290|Hck|15162|hemopoietic cell kinase	AK152506|Hck|15162|hemopoietic cell kinase	AK149736|Hck|15162|hemopoietic cell kinase	AK165315|Hck|15162|hemopoietic cell kinase	AK159234|Hck|15162|hemopoietic cell kinase	AK155975|Hck|15162|hemopoietic cell kinase	Y00487|Hck|15162|hemopoietic cell kinase	J03023|Hck|15162|hemopoietic cell kinase
mm9_v1_chr15_-_78403110_78403220	10.4993	HMX1.p2	X53247|Rac2|19354|RAS-related C3 botulinum substrate 2	BC005455|Rac2|19354|RAS-related C3 botulinum substrate 2	AK007561|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088805|Rac2|19354|RAS-related C3 botulinum substrate 2	AK144136|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088415|Rac2|19354|RAS-related C3 botulinum substrate 2	AK011045|Rac2|19354|RAS-related C3 botulinum substrate 2	AK171321|Rac2|19354|RAS-related C3 botulinum substrate 2	NM_009008|Rac2|19354|RAS-related C3 botulinum substrate 2
mm9_v1_chr11_-_117687109_117687327	10.3057	HMX1.p2	M11945|Tk1|21877|thymidine kinase 1	S57244|Tk1|21877|thymidine kinase 1	AK087988|Tk1|21877|thymidine kinase 1	BC012215|Tk1|21877|thymidine kinase 1	AK139244|Tk1|21877|thymidine kinase 1	BC091758|Tk1|21877|thymidine kinase 1	AK085188|Tk1|21877|thymidine kinase 1	NM_009387|Tk1|21877|thymidine kinase 1
mm9_v1_chr5_+_123844794_123844938	10.0974	HMX1.p2	AK047475|Mlxip|208104|MLX interacting protein	NM_133917|Mlxip|208104|MLX interacting protein	NM_177582|Mlxip|208104|MLX interacting protein	BC137770|Mlxip|208104|MLX interacting protein	AY968204|Mlxip|208104|MLX interacting protein
mm9_v1_chr15_-_102062331_102062365	9.9335	HMX1.p2	AK155207|Itgb7|16421|integrin beta 7	AK155594|Itgb7|16421|integrin beta 7	AK144773|Itgb7|16421|integrin beta 7	BC011184|Itgb7|16421|integrin beta 7	AK078871|Itgb7|16421|integrin beta 7	AK154766|Itgb7|16421|integrin beta 7	NM_013566|Itgb7|16421|integrin beta 7
mm9_v1_chr7_-_56136405_56136410	9.84004	HMX1.p2	AK084513|E2f8|108961|E2F transcription factor 8	NM_001013368|E2f8|108961|E2F transcription factor 8
mm9_v1_chr7_-_90883999_90884032	9.68	HMX1.p2	AF175292|Il16|16170|interleukin 16	NM_010551|Il16|16170|interleukin 16	AK220455|Il16|16170|interleukin 16	BC058709|Il16|16170|interleukin 16
mm9_v1_chr1_+_52065087_52065089	9.4986	HMX1.p2	NM_011487|Stat4|20849|signal transducer and activator of transcription 4	U09351|Stat4|20849|signal transducer and activator of transcription 4
mm9_v1_chr2_-_73291933_73291985	9.34486	HMX1.p2	AK156547|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr11_+_11586273_11586432	9.33863	HMX1.p2	BC138789|Ikzf1|22778|IKAROS family zinc finger 1
mm9_v1_chr15_-_102062309_102062327	9.33738	HMX1.p2	M95632|Itgb7|16421|integrin beta 7	M95633|Itgb7|16421|integrin beta 7	M68903|Itgb7|16421|integrin beta 7
mm9_v1_chr10_-_6373309_6373324	9.19428	HMX1.p2	BC058265|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr10_+_79451332_79451366	8.664	HMX1.p2	AK051845|Cnn2|12798|calponin 2	NM_007725|Cnn2|12798|calponin 2
mm9_v1_chr10_-_6373388_6373465	8.61399	HMX1.p2	AK075931|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK160025|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK036284|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK028211|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AK038579|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170785|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_001170786|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	NM_172308|Mthfd1l|270685|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm9_v1_chr3_+_60305108_60305212	8.46039	HMX1.p2	AK162039|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK149405|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AB093240|Mbnl1|56758|muscleblind-like 1 (Drosophila)	NM_020007|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK088871|Mbnl1|56758|muscleblind-like 1 (Drosophila)	AK153848|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC060031|Mbnl1|56758|muscleblind-like 1 (Drosophila)	BC096600|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr11_-_102180282_102180305	8.45559	HMX1.p2	AK128947|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chrX_+_48194578_48194623	8.30047	HMX1.p2	BC005708|2610018G03Rik|70415|RIKEN cDNA 2610018G03 gene	NM_133729|2610018G03Rik|70415|RIKEN cDNA 2610018G03 gene
mm9_v1_chr17_+_35400983_35401008	8.18017	HMX1.p2	J00407|H2-D1|14964|histocompatibility 2, D region locus 1
mm9_v1_chr19_-_3897078_3897163	8.07497	HMX1.p2	AK195113|Tcirg1|27060|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
mm9_v1_chr11_-_102180258_102180276	8.02734	HMX1.p2	AK004961|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chrX_+_48194531_48194574	7.89486	HMX1.p2	AK034609|2610018G03Rik|70415|RIKEN cDNA 2610018G03 gene
mm9_v1_chr9_-_110556645_110556664	7.89228	HMX1.p2	BC157956|Nbeal2|235627|neurobeachin-like 2	BC172118|Nbeal2|235627|neurobeachin-like 2	NM_183276|Nbeal2|235627|neurobeachin-like 2
mm9_v1_chr5_-_135090819_135090917	7.88009	HMX1.p2	BC005804|Lat2|56743|linker for activation of T cells family, member 2	AK144261|Lat2|56743|linker for activation of T cells family, member 2	AK138953|Lat2|56743|linker for activation of T cells family, member 2	AK162321|Lat2|56743|linker for activation of T cells family, member 2	AY190024|Lat2|56743|linker for activation of T cells family, member 2	NM_020044|Lat2|56743|linker for activation of T cells family, member 2	NM_022964|Lat2|56743|linker for activation of T cells family, member 2	AK143533|Lat2|56743|linker for activation of T cells family, member 2
mm9_v1_chr11_+_70246079_70246238	7.71029	HMX1.p2	AK150389|Arrb2|216869|arrestin, beta 2	AK170647|Arrb2|216869|arrestin, beta 2	AK089542|Arrb2|216869|arrestin, beta 2	AK162889|Arrb2|216869|arrestin, beta 2	AK159317|Arrb2|216869|arrestin, beta 2	NM_145429|Arrb2|216869|arrestin, beta 2	AK154874|Arrb2|216869|arrestin, beta 2	AK170889|Arrb2|216869|arrestin, beta 2	BC016642|Arrb2|216869|arrestin, beta 2
mm9_v1_chr8_-_107784507_107784581	7.68201	HMX1.p2	BC028542|Tradd|71609|TNFRSF1A-associated via death domain
mm9_v1_chr3_-_135988955_135989029	7.54655	HMX1.p2	BC026932|Bank1|242248|B-cell scaffold protein with ankyrin repeats 1	AK041242|Bank1|242248|B-cell scaffold protein with ankyrin repeats 1	BC116328|Bank1|242248|B-cell scaffold protein with ankyrin repeats 1	EU051378|Bank1|242248|B-cell scaffold protein with ankyrin repeats 1	NM_001033350|Bank1|242248|B-cell scaffold protein with ankyrin repeats 1	AK156201|Bank1|242248|B-cell scaffold protein with ankyrin repeats 1	AY178734|Bank1|242248|B-cell scaffold protein with ankyrin repeats 1
mm9_v1_chr11_-_102180374_102180491	7.49526	HMX1.p2	BC004676|Ubtf|21429|upstream binding transcription factor, RNA polymerase I	NM_011551|Ubtf|21429|upstream binding transcription factor, RNA polymerase I
mm9_v1_chr7_+_138712015_138712162	7.48336	HMX1.p2	AK039977|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	AK079742|Bub3|12237|budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)
mm9_v1_chr16_-_32165509_32165642	7.45196	HMX1.p2	AK084858|Lrrc33|224109|leucine rich repeat containing 33	AK088770|Lrrc33|224109|leucine rich repeat containing 33	AK128897|Lrrc33|224109|leucine rich repeat containing 33	NM_146069|Lrrc33|224109|leucine rich repeat containing 33	BC027411|Lrrc33|224109|leucine rich repeat containing 33	AK167934|Lrrc33|224109|leucine rich repeat containing 33	AK042502|Lrrc33|224109|leucine rich repeat containing 33
mm9_v1_chrX_+_48194918_48194941	7.32807	HMX1.p2	BC132438|2610018G03Rik|70415|RIKEN cDNA 2610018G03 gene	BC138193|2610018G03Rik|70415|RIKEN cDNA 2610018G03 gene	BC145189|2610018G03Rik|70415|RIKEN cDNA 2610018G03 gene
mm9_v1_chr7_-_56136367_56136391	7.27128	HMX1.p2	AK154018|E2f8|108961|E2F transcription factor 8	AK157235|E2f8|108961|E2F transcription factor 8	AK160240|E2f8|108961|E2F transcription factor 8	AK172437|E2f8|108961|E2F transcription factor 8	AK049525|E2f8|108961|E2F transcription factor 8
mm9_v1_chr5_-_98459488_98459751	7.10443	HMX1.p2	AK190386|Antxr2|71914|anthrax toxin receptor 2	AK207219|Antxr2|71914|anthrax toxin receptor 2	AK170655|Antxr2|71914|anthrax toxin receptor 2	AK171292|Antxr2|71914|anthrax toxin receptor 2	AK166124|Antxr2|71914|anthrax toxin receptor 2
mm9_v1_chr1_-_183772442_183772553	7.02329	HMX1.p2	BC021516|Lbr|98386|lamin B receptor	AK166850|Lbr|98386|lamin B receptor	AK167157|Lbr|98386|lamin B receptor	AK033459|Lbr|98386|lamin B receptor	AK088179|Lbr|98386|lamin B receptor	AK030606|Lbr|98386|lamin B receptor	BC042522|Lbr|98386|lamin B receptor	AK151798|Lbr|98386|lamin B receptor	AK161762|Lbr|98386|lamin B receptor	AK028426|Lbr|98386|lamin B receptor	NM_133815|Lbr|98386|lamin B receptor
mm9_v1_chr1_+_140860285_140860402	6.89772	HMX1.p2	NM_001166501|Dennd1b|329260|DENN/MADD domain containing 1B	BC042698|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr9_+_108462759_108462899	6.87285	HMX1.p2	AK169129|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK169788|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK146362|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151706|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK166667|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M33934|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK002676|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK011777|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK143505|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK150713|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151233|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK152691|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK160569|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK159822|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC052671|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC010314|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	NM_011830|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M98333|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2
mm9_v1_chr16_-_55838747_55838771	6.81212	HMX1.p2	AK149946|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	NM_001159395|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	NM_030612|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AB047549|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chr7_+_19469999_19470074	6.75582	HMX1.p2	BC005582|Pglyrp1|21946|peptidoglycan recognition protein 1	AF076482|Pglyrp1|21946|peptidoglycan recognition protein 1	AK008335|Pglyrp1|21946|peptidoglycan recognition protein 1	NM_009402|Pglyrp1|21946|peptidoglycan recognition protein 1	X86374|Pglyrp1|21946|peptidoglycan recognition protein 1	AK043227|Pglyrp1|21946|peptidoglycan recognition protein 1	AF193843|Pglyrp1|21946|peptidoglycan recognition protein 1	CT010165|Pglyrp1|21946|peptidoglycan recognition protein 1
mm9_v1_chr17_-_71660199_71660362	6.74955	HMX1.p2	GQ872457|Emilin2|246707|elastin microfibril interfacer 2	GQ872460|Emilin2|246707|elastin microfibril interfacer 2	AF468645|Emilin2|246707|elastin microfibril interfacer 2	AK171616|Emilin2|246707|elastin microfibril interfacer 2	AK155913|Emilin2|246707|elastin microfibril interfacer 2	AK170391|Emilin2|246707|elastin microfibril interfacer 2	AK154230|Emilin2|246707|elastin microfibril interfacer 2	AK170288|Emilin2|246707|elastin microfibril interfacer 2	AK171579|Emilin2|246707|elastin microfibril interfacer 2	AK171592|Emilin2|246707|elastin microfibril interfacer 2	AK155037|Emilin2|246707|elastin microfibril interfacer 2	AK155366|Emilin2|246707|elastin microfibril interfacer 2	AK171020|Emilin2|246707|elastin microfibril interfacer 2	AK155879|Emilin2|246707|elastin microfibril interfacer 2	AK155306|Emilin2|246707|elastin microfibril interfacer 2	AK155797|Emilin2|246707|elastin microfibril interfacer 2	AK155554|Emilin2|246707|elastin microfibril interfacer 2	AK155878|Emilin2|246707|elastin microfibril interfacer 2	AK170081|Emilin2|246707|elastin microfibril interfacer 2	AK171309|Emilin2|246707|elastin microfibril interfacer 2	AK155909|Emilin2|246707|elastin microfibril interfacer 2	AK170801|Emilin2|246707|elastin microfibril interfacer 2	NM_145158|Emilin2|246707|elastin microfibril interfacer 2	AK170953|Emilin2|246707|elastin microfibril interfacer 2	AK170822|Emilin2|246707|elastin microfibril interfacer 2	AK171015|Emilin2|246707|elastin microfibril interfacer 2	AK155918|Emilin2|246707|elastin microfibril interfacer 2
mm9_v1_chr16_-_55838834_55839011	6.64293	HMX1.p2	AB020974|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	BC033044|Nfkbiz|80859|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
mm9_v1_chr1_-_167124442_167124588	6.45631	HMX1.p2	BC017549|Sft2d2|108735|SFT2 domain containing 2	AK036578|Sft2d2|108735|SFT2 domain containing 2	AK170590|Sft2d2|108735|SFT2 domain containing 2	AK156973|Sft2d2|108735|SFT2 domain containing 2	AK075812|Sft2d2|108735|SFT2 domain containing 2	NM_145512|Sft2d2|108735|SFT2 domain containing 2
mm9_v1_chrX_-_71491736_71491773	6.44123	HMX1.p2	BC038478|Flna|192176|filamin, alpha	AK089311|Flna|192176|filamin, alpha
mm9_v1_chr18_+_67448839_67448957	6.36074	HMX1.p2	AK154489|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK170962|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AF353730|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	NM_053261|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK171626|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	AK154845|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2	BC011093|Impa2|114663|inositol (myo)-1(or 4)-monophosphatase 2
mm9_v1_chr16_-_92605804_92605880	6.26547	HMX1.p2	AK153274|Runx1|12394|runt related transcription factor 1
mm9_v1_chr19_-_41459518_41459628	6.23344	HMX1.p2	BC113141|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AF293806|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	NM_031376|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK087295|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK154326|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK171021|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170130|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK170925|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1	AK089785|Pik3ap1|83490|phosphoinositide-3-kinase adaptor protein 1
mm9_v1_chr7_+_89003886_89004046	6.23006	HMX1.p2	AK083132|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK135100|Tm6sf1|107769|transmembrane 6 superfamily member 1	NM_145375|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK163621|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172109|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK046714|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172145|Tm6sf1|107769|transmembrane 6 superfamily member 1	BC023123|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK162572|Tm6sf1|107769|transmembrane 6 superfamily member 1
mm9_v1_chr9_+_106109125_106109148	6.21999	HMX1.p2	AK002699|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK087422|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)	AK003997|Twf2|23999|twinfilin, actin-binding protein, homolog 2 (Drosophila)
mm9_v1_chrX_-_71491851_71491901	6.21114	HMX1.p2	AK044856|Flna|192176|filamin, alpha	BC151024|Flna|192176|filamin, alpha	NM_010227|Flna|192176|filamin, alpha
mm9_v1_chr12_+_33987379_33987464	6.17924	HMX1.p2	NM_001033436|Atxn7l1|380753|ataxin 7-like 1	AK156016|Atxn7l1|380753|ataxin 7-like 1	BC147479|Atxn7l1|380753|ataxin 7-like 1	BC147483|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr2_+_125073393_125073429	6.06105	HMX1.p2	AF091101|Dut|110074|deoxyuridine triphosphatase
mm9_v1_chr17_+_35576081_35576165	5.95698	HMX1.p2	BC120554|H2-Q9|110558|histocompatibility 2, Q region locus 9	NM_001198560|H2-Q7|15018|histocompatibility 2, Q region locus 7	NM_001198561|H2-Q7|15018|histocompatibility 2, Q region locus 7	NM_010394|H2-Q7|15018|histocompatibility 2, Q region locus 7	BC090638|H2-Q7|15018|histocompatibility 2, Q region locus 7	AY989883|H2-Q9|110558|histocompatibility 2, Q region locus 9	X05389|H2-Q7|15018|histocompatibility 2, Q region locus 7
mm9_v1_chr6_+_83293025_83293050	5.90891	HMX1.p2	BC011285|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr2_+_103810274_103810481	5.89156	HMX1.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chr4_-_133443662_133443718	5.79147	HMX1.p2	BC049076|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	BC094470|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	M28489|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	AK148208|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1	NM_009097|Rps6ka1|20111|ribosomal protein S6 kinase polypeptide 1
mm9_v1_chr9_-_114690887_114691007	5.73424	HMX1.p2	AK151785|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AF188504|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168280|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	NM_133978|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC038633|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK167886|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	BC026773|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK168024|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AY241869|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7	AK040123|Cmtm7|102545|CKLF-like MARVEL transmembrane domain containing 7
mm9_v1_chr10_+_43198945_43198945	5.7317	HMX1.p2	BC060240|Bend3|331623|BEN domain containing 3	NM_199028|Bend3|331623|BEN domain containing 3
mm9_v1_chr7_+_20162604_20162709	5.70169	HMX1.p2	NM_022409|Zfp296|63872|zinc finger protein 296	AK008748|Zfp296|63872|zinc finger protein 296	BC099454|Zfp296|63872|zinc finger protein 296
mm9_v1_chrX_+_155693729_155693868	5.64551	HMX1.p2	AK154778|Rps6ka3|110651|ribosomal protein S6 kinase polypeptide 3
mm9_v1_chr3_-_54539285_54539314	5.64482	HMX1.p2	AK220227|Exosc8|69639|exosome component 8	NM_001163570|Exosc8|69639|exosome component 8	NM_027148|Exosc8|69639|exosome component 8	AK047257|Exosc8|69639|exosome component 8	BC059089|Exosc8|69639|exosome component 8
mm9_v1_chr11_-_72951771_72951795	5.64296	HMX1.p2	BC113148|Gsg2|14841|germ cell-specific gene 2	AK138750|Gsg2|14841|germ cell-specific gene 2	D87326|Gsg2|14841|germ cell-specific gene 2	NM_010353|Gsg2|14841|germ cell-specific gene 2
mm9_v1_chr6_+_70557402_70557430	5.59709	HMX1.p2	
mm9_v1_chr17_+_57418517_57418636	5.53782	HMX1.p2	M59833|Vav1|22324|vav 1 oncogene	AK151214|Vav1|22324|vav 1 oncogene	NM_001163815|Vav1|22324|vav 1 oncogene	NM_001163816|Vav1|22324|vav 1 oncogene	NM_011691|Vav1|22324|vav 1 oncogene	AK151183|Vav1|22324|vav 1 oncogene	AK151367|Vav1|22324|vav 1 oncogene	AK152073|Vav1|22324|vav 1 oncogene	AK152425|Vav1|22324|vav 1 oncogene	AK153265|Vav1|22324|vav 1 oncogene	AK159326|Vav1|22324|vav 1 oncogene	AK169478|Vav1|22324|vav 1 oncogene	AK171873|Vav1|22324|vav 1 oncogene	AK151373|Vav1|22324|vav 1 oncogene	AK150398|Vav1|22324|vav 1 oncogene	AK151831|Vav1|22324|vav 1 oncogene	AK088586|Vav1|22324|vav 1 oncogene	AK152555|Vav1|22324|vav 1 oncogene	AK154183|Vav1|22324|vav 1 oncogene	AK146347|Vav1|22324|vav 1 oncogene	BC020487|Vav1|22324|vav 1 oncogene	AK153052|Vav1|22324|vav 1 oncogene	X64361|Vav1|22324|vav 1 oncogene	CT010321|Vav1|22324|vav 1 oncogene
mm9_v1_chrX_-_71618617_71618655	5.47515	HMX1.p2	BC023050|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	AK041958|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr18_-_36886051_36886289	5.3986	HMX1.p2	CT010355|Cd14|12475|CD14 antigen	X13333|Cd14|12475|CD14 antigen	AK156262|Cd14|12475|CD14 antigen	AK152427|Cd14|12475|CD14 antigen	AK153229|Cd14|12475|CD14 antigen
mm9_v1_chr12_+_82049290_82049329	5.39062	HMX1.p2	AK135336|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr19_-_7315495_7315711	5.36959	HMX1.p2	AK202154|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK035418|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK033510|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK170548|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK033896|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK089209|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK162625|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC020020|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK016504|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	NM_027643|Naa40|70999|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
mm9_v1_chr17_-_34136793_34136951	5.31488	HMX1.p2	M14827|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr6_+_17015159_17015226	5.3107	HMX1.p2	AK083910|Tes|21753|testis derived transcript	AK132249|Tes|21753|testis derived transcript	AK167274|Tes|21753|testis derived transcript	BC010465|Tes|21753|testis derived transcript	AK145609|Tes|21753|testis derived transcript	AK167101|Tes|21753|testis derived transcript	BC051103|Tes|21753|testis derived transcript	BC003808|Tes|21753|testis derived transcript
mm9_v1_chr14_-_56721304_56721410	5.27486	HMX1.p2	BC125511|Ctsg|13035|cathepsin G	BC125513|Ctsg|13035|cathepsin G	NM_007800|Ctsg|13035|cathepsin G	X78544|Ctsg|13035|cathepsin G
mm9_v1_chr10_+_59809598_59809683	5.25197	HMX1.p2	NM_001159572|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	NM_028732|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK079734|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK170059|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK032383|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK159086|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK159864|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK163118|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK170419|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK171045|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK033393|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK030479|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK014600|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	AK131118|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene	BC003967|4632428N05Rik|74048|RIKEN cDNA 4632428N05 gene
mm9_v1_chr9_+_32503600_32503674	5.21694	HMX1.p2	NM_001038642|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	NM_011808|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	BC010588|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain	AK168247|Ets1|23871|E26 avian leukemia oncogene 1, 5' domain
mm9_v1_chr8_+_86479405_86479613	5.21357	HMX1.p2	AK134906|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK005646|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK077005|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	BC003428|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	NM_024184|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK077718|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK150818|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK151951|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	AK165322|Asf1b|66929|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)
mm9_v1_chr17_-_34136726_34136785	5.18663	HMX1.p2	BC011306|H2-K1|14972|histocompatibility 2, K1, K region	J00400|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr16_+_57549340_57549381	5.17935	HMX1.p2	AK019472|Filip1l|78749|filamin A interacting protein 1-like	NM_001177871|Filip1l|78749|filamin A interacting protein 1-like	AK132319|Filip1l|78749|filamin A interacting protein 1-like	BC024523|Filip1l|78749|filamin A interacting protein 1-like	BC062166|Filip1l|78749|filamin A interacting protein 1-like
mm9_v1_chr8_+_77633426_77633531	5.17468	HMX1.p2	BC090645|Mcm5|17218|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)	NM_008566|Mcm5|17218|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)	AK033196|Mcm5|17218|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)	AK133826|Mcm5|17218|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)	AK051795|Mcm5|17218|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)	BC094416|Mcm5|17218|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)	D26090|Mcm5|17218|minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)
mm9_v1_chr17_+_35137995_35138088	5.15542	HMX1.p2	AK157814|Vars|22321|valyl-tRNA synthetase	AK012123|Vars|22321|valyl-tRNA synthetase	AK154823|Vars|22321|valyl-tRNA synthetase	BC053703|Vars|22321|valyl-tRNA synthetase	AF087680|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr1_-_39634096_39634285	5.11927	HMX1.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr2_+_153475189_153475352	5.11253	HMX1.p2	NM_001003960|Dnmt3b|13436|DNA methyltransferase 3B	NM_001003961|Dnmt3b|13436|DNA methyltransferase 3B	NM_001003963|Dnmt3b|13436|DNA methyltransferase 3B	NM_001122997|Dnmt3b|13436|DNA methyltransferase 3B	NM_010068|Dnmt3b|13436|DNA methyltransferase 3B	AF151969|Dnmt3b|13436|DNA methyltransferase 3B	AF151970|Dnmt3b|13436|DNA methyltransferase 3B	AF151971|Dnmt3b|13436|DNA methyltransferase 3B	AF151972|Dnmt3b|13436|DNA methyltransferase 3B	AF151973|Dnmt3b|13436|DNA methyltransferase 3B	AF151974|Dnmt3b|13436|DNA methyltransferase 3B	AF151975|Dnmt3b|13436|DNA methyltransferase 3B	AF151976|Dnmt3b|13436|DNA methyltransferase 3B	AF068626|Dnmt3b|13436|DNA methyltransferase 3B	AF068627|Dnmt3b|13436|DNA methyltransferase 3B	AF068628|Dnmt3b|13436|DNA methyltransferase 3B	AY078427|Dnmt3b|13436|DNA methyltransferase 3B	BC105677|Dnmt3b|13436|DNA methyltransferase 3B	BC105922|Dnmt3b|13436|DNA methyltransferase 3B
mm9_v1_chr7_-_25873560_25873562	5.00676	HMX1.p2	
mm9_v1_chr7_-_148286422_148286499	4.98362	HMX1.p2	BC094069|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	AK133518|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	AK145889|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain	NM_023059|Sigirr|24058|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
mm9_v1_chr15_+_81416643_81416789	4.9648	HMX1.p2	NM_177821|Ep300|328572|E1A binding protein p300	AK042627|Ep300|328572|E1A binding protein p300	BC144976|Ep300|328572|E1A binding protein p300	BC150681|Ep300|328572|E1A binding protein p300
mm9_v1_chr5_+_30339682_30339860	4.95062	HMX1.p2	AK150440|Il6|16193|interleukin 6	AK089780|Il6|16193|interleukin 6	J03783|Il6|16193|interleukin 6	X06203|Il6|16193|interleukin 6	NM_031168|Il6|16193|interleukin 6	X54542|Il6|16193|interleukin 6	BC132458|Il6|16193|interleukin 6	BC138766|Il6|16193|interleukin 6	BC145409|Il6|16193|interleukin 6	DQ788722|Il6|16193|interleukin 6	AK152189|Il6|16193|interleukin 6
mm9_v1_chr11_-_114995194_114995307	4.90652	HMX1.p2	AB292061|Cd300lf|246746|CD300 antigen like family member F	AY457047|Cd300lf|246746|CD300 antigen like family member F	AK154273|Cd300lf|246746|CD300 antigen like family member F	AY214460|Cd300lf|246746|CD300 antigen like family member F	AF251703|Cd300lf|246746|CD300 antigen like family member F	BC057864|Cd300lf|246746|CD300 antigen like family member F	AK089465|Cd300lf|246746|CD300 antigen like family member F	AK155367|Cd300lf|246746|CD300 antigen like family member F	AK089313|Cd300lf|246746|CD300 antigen like family member F	NM_001169153|Cd300lf|246746|CD300 antigen like family member F	NM_145634|Cd300lf|246746|CD300 antigen like family member F
mm9_v1_chr5_+_72594551_72594730	4.88475	HMX1.p2	AK087333|Atp10d|231287|ATPase, class V, type 10D	AJ441079|Atp10d|231287|ATPase, class V, type 10D	NM_153389|Atp10d|231287|ATPase, class V, type 10D	BC099527|Atp10d|231287|ATPase, class V, type 10D	BC141328|Atp10d|231287|ATPase, class V, type 10D
mm9_v1_chr6_+_38868942_38869113	4.87817	HMX1.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chr12_+_8797502_8797628	4.82084	HMX1.p2	
mm9_v1_chr6_-_127100954_127101069	4.81475	HMX1.p2	M86182|Ccnd2|12444|cyclin D2	AK007904|Ccnd2|12444|cyclin D2	AK011412|Ccnd2|12444|cyclin D2	AK077367|Ccnd2|12444|cyclin D2	AK147345|Ccnd2|12444|cyclin D2	AK160751|Ccnd2|12444|cyclin D2	AK168954|Ccnd2|12444|cyclin D2	BC049086|Ccnd2|12444|cyclin D2	M83749|Ccnd2|12444|cyclin D2	NM_009829|Ccnd2|12444|cyclin D2
mm9_v1_chr3_-_97414085_97414151	4.72857	HMX1.p2	BC052385|Chd1l|68058|chromodomain helicase DNA binding protein 1-like	BC019617|Chd1l|68058|chromodomain helicase DNA binding protein 1-like	AK014473|Chd1l|68058|chromodomain helicase DNA binding protein 1-like	NM_026539|Chd1l|68058|chromodomain helicase DNA binding protein 1-like	BC057567|Chd1l|68058|chromodomain helicase DNA binding protein 1-like	BC062966|Chd1l|68058|chromodomain helicase DNA binding protein 1-like	AK011061|Chd1l|68058|chromodomain helicase DNA binding protein 1-like	AK165656|Chd1l|68058|chromodomain helicase DNA binding protein 1-like
mm9_v1_chrX_+_20002809_20002842	4.70663	HMX1.p2	BC065070|Phf16|382207|PHD finger protein 16
mm9_v1_chrX_-_71269083_71269215	4.70606	HMX1.p2	U56773|Irak1|16179|interleukin-1 receptor-associated kinase 1	AB088370|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK045958|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK052933|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK144879|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK143694|Irak1|16179|interleukin-1 receptor-associated kinase 1
mm9_v1_chr1_+_58852303_58852383	4.67165	HMX1.p2	AF067834|Casp8|12370|caspase 8	BC049955|Casp8|12370|caspase 8
mm9_v1_chr4_-_94223435_94223491	4.61054	HMX1.p2	AK046647|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK076487|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK013385|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK032696|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	BC020067|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK150311|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK140382|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK171141|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK160297|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	AK160572|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene	NM_026368|5830433M19Rik|67770|RIKEN cDNA 5830433M19 gene
mm9_v1_chr7_+_86059126_86059232	4.58554	HMX1.p2	CT010213|Isg20|57444|interferon-stimulated protein
mm9_v1_chr19_+_7049639_7049662	4.56444	HMX1.p2	BC125654|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC125650|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr17_+_57244807_57244809	4.54778	HMX1.p2	AK155610|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9	NM_009404|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9
mm9_v1_chr1_+_58852471_58852564	4.51228	HMX1.p2	AK156135|Casp8|12370|caspase 8	AK185575|Casp8|12370|caspase 8	AJ007749|Casp8|12370|caspase 8
mm9_v1_chr1_+_182571464_182571502	4.49776	HMX1.p2	AF190325|Lin9|72568|lin-9 homolog (C. elegans)	NM_001103182|Lin9|72568|lin-9 homolog (C. elegans)	NM_175186|Lin9|72568|lin-9 homolog (C. elegans)	AK052618|Lin9|72568|lin-9 homolog (C. elegans)	BC088992|Lin9|72568|lin-9 homolog (C. elegans)	BC099695|Lin9|72568|lin-9 homolog (C. elegans)	AK042357|Lin9|72568|lin-9 homolog (C. elegans)
mm9_v1_chr1_+_154613763_154613962	4.49543	HMX1.p2	AK166335|Arpc5|67771|actin related protein 2/3 complex, subunit 5	BC060143|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166284|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166725|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK166919|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK008097|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151656|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK152281|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159738|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011348|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK011911|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017669|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK019149|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150443|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK150703|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK153262|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK149756|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151654|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168264|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK087427|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK151490|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK159438|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK167916|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK168986|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK191774|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK181325|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK187022|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK189385|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK208127|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK209531|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr7_-_26004870_26004903	4.49184	HMX1.p2	AK043908|Dedd2|67379|death effector domain-containing DNA binding protein 2	BC092250|Dedd2|67379|death effector domain-containing DNA binding protein 2	NM_207677|Dedd2|67379|death effector domain-containing DNA binding protein 2	AK135320|Dedd2|67379|death effector domain-containing DNA binding protein 2
mm9_v1_chr5_-_123438517_123438541	4.49161	HMX1.p2	NM_001005866|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr6_-_126889539_126889638	4.48813	HMX1.p2	BC003738|Rad51ap1|19362|RAD51 associated protein 1	AK010920|Rad51ap1|19362|RAD51 associated protein 1	U93583|Rad51ap1|19362|RAD51 associated protein 1	AK011379|Rad51ap1|19362|RAD51 associated protein 1	NM_009013|Rad51ap1|19362|RAD51 associated protein 1	AK079525|Rad51ap1|19362|RAD51 associated protein 1	AK077829|Rad51ap1|19362|RAD51 associated protein 1	AK166703|Rad51ap1|19362|RAD51 associated protein 1
mm9_v1_chrX_-_71618556_71618610	4.48048	HMX1.p2	EU599043|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599044|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599045|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	BC027440|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	NM_145406|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr9_+_44789868_44790000	4.47953	HMX1.p2	AK042172|Cd3d|12500|CD3 antigen, delta polypeptide	NM_013487|Cd3d|12500|CD3 antigen, delta polypeptide	AK050629|Cd3d|12500|CD3 antigen, delta polypeptide	AK153843|Cd3d|12500|CD3 antigen, delta polypeptide	AK154064|Cd3d|12500|CD3 antigen, delta polypeptide	BC062807|Cd3d|12500|CD3 antigen, delta polypeptide	EF382667|Cd3d|12500|CD3 antigen, delta polypeptide	HM536173|Cd3d|12500|CD3 antigen, delta polypeptide	X02339|Cd3d|12500|CD3 antigen, delta polypeptide
mm9_v1_chr8_-_97437166_97437286	4.46049	HMX1.p2	BC107374|Ccdc102a|234582|coiled-coil domain containing 102A	BC107375|Ccdc102a|234582|coiled-coil domain containing 102A	BC114992|Ccdc102a|234582|coiled-coil domain containing 102A
mm9_v1_chr3_-_89222140_89222253	4.45714	HMX1.p2	AK011782|Cks1b|54124|CDC28 protein kinase 1b	AK004101|Cks1b|54124|CDC28 protein kinase 1b	AK011314|Cks1b|54124|CDC28 protein kinase 1b	AK010414|Cks1b|54124|CDC28 protein kinase 1b	BC076579|Cks1b|54124|CDC28 protein kinase 1b	AB025409|Cks1b|54124|CDC28 protein kinase 1b	NM_016904|Cks1b|54124|CDC28 protein kinase 1b
mm9_v1_chr1_-_183141500_183141531	4.45534	HMX1.p2	AK075743|Wdr26|226757|WD repeat domain 26
mm9_v1_chr5_-_139936486_139936511	4.45391	HMX1.p2	NM_028469|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chr6_-_116411041_116411195	4.40121	HMX1.p2	L42198|Alox5|11689|arachidonate 5-lipoxygenase	AK170016|Alox5|11689|arachidonate 5-lipoxygenase	BC139102|Alox5|11689|arachidonate 5-lipoxygenase	BC141213|Alox5|11689|arachidonate 5-lipoxygenase	AK171191|Alox5|11689|arachidonate 5-lipoxygenase	AK089344|Alox5|11689|arachidonate 5-lipoxygenase	AK137481|Alox5|11689|arachidonate 5-lipoxygenase	AK169938|Alox5|11689|arachidonate 5-lipoxygenase	AK170434|Alox5|11689|arachidonate 5-lipoxygenase	AK170879|Alox5|11689|arachidonate 5-lipoxygenase	AK171413|Alox5|11689|arachidonate 5-lipoxygenase	AK136868|Alox5|11689|arachidonate 5-lipoxygenase	NM_009662|Alox5|11689|arachidonate 5-lipoxygenase
mm9_v1_chr6_+_113647848_113647876	4.39766	HMX1.p2	AK146408|Tatdn2|381801|TatD DNase domain containing 2
mm9_v1_chr7_-_7074155_7074186	4.39623	HMX1.p2	BC055688|Zfp954|232853|zinc finger protein 954	AK033116|Zfp954|232853|zinc finger protein 954	NM_172738|Zfp954|232853|zinc finger protein 954
mm9_v1_chrX_+_159339561_159339801	4.36879	HMX1.p2	AK084595|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK085381|Ctps2|55936|cytidine 5'-triphosphate synthase 2	BC003257|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK150966|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK151597|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK164206|Ctps2|55936|cytidine 5'-triphosphate synthase 2	AK032018|Ctps2|55936|cytidine 5'-triphosphate synthase 2
mm9_v1_chr1_+_61034757_61034802	4.36631	HMX1.p2	NM_017480|Icos|54167|inducible T-cell co-stimulator	AK030827|Icos|54167|inducible T-cell co-stimulator	AJ250559|Icos|54167|inducible T-cell co-stimulator	BC034852|Icos|54167|inducible T-cell co-stimulator	AB023132|Icos|54167|inducible T-cell co-stimulator	AF257230|Icos|54167|inducible T-cell co-stimulator	AF216748|Icos|54167|inducible T-cell co-stimulator
mm9_v1_chr14_-_47809063_47809127	4.34229	HMX1.p2	L09737|Gch1|14528|GTP cyclohydrolase 1	BC005643|Gch1|14528|GTP cyclohydrolase 1	NM_008102|Gch1|14528|GTP cyclohydrolase 1	BC069921|Gch1|14528|GTP cyclohydrolase 1	AK150657|Gch1|14528|GTP cyclohydrolase 1	AK152571|Gch1|14528|GTP cyclohydrolase 1
mm9_v1_chr1_+_59969845_59969868	4.33115	HMX1.p2	AK154812|Fam117b|72750|family with sequence similarity 117, member B	NM_001037725|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chr16_-_92697567_92697590	4.31571	HMX1.p2	AK155262|Runx1|12394|runt related transcription factor 1	D26532|Runx1|12394|runt related transcription factor 1	NM_001111023|Runx1|12394|runt related transcription factor 1	NM_009821|Runx1|12394|runt related transcription factor 1
mm9_v1_chr1_+_58852217_58852287	4.30914	HMX1.p2	AK146758|Casp8|12370|caspase 8	AK168812|Casp8|12370|caspase 8	NM_009812|Casp8|12370|caspase 8	BC006737|Casp8|12370|caspase 8
mm9_v1_chr4_+_135750500_135750521	4.27218	HMX1.p2	AK033797|E2f2|242705|E2F transcription factor 2
mm9_v1_chr6_-_28211600_28211600	4.27116	HMX1.p2	BC119236|Zfp800|627049|zinc finger protein 800	BC119262|Zfp800|627049|zinc finger protein 800	BC144761|Zfp800|627049|zinc finger protein 800	NM_001081678|Zfp800|627049|zinc finger protein 800
mm9_v1_chr2_+_130100145_130100196	4.2297	HMX1.p2	NM_024193|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK009799|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK030730|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK011481|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK011744|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK013528|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK077795|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK139924|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK146243|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK150258|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	AK154024|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)	BC021355|Nop56|67134|NOP56 ribonucleoprotein homolog (yeast)
mm9_v1_chr19_+_36484237_36484340	4.22025	HMX1.p2	AK146133|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr5_+_28492235_28492251	4.17635	HMX1.p2	AK157766|En2|13799|engrailed 2	NM_010134|En2|13799|engrailed 2
mm9_v1_chr4_-_133684599_133684716	4.16381	HMX1.p2	AK003431|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	BC008110|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3	NM_080559|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3
mm9_v1_chr17_-_23810808_23810848	4.14795	HMX1.p2	AK089746|Thoc6|386612|THO complex 6 homolog (Drosophila)	BC089551|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr2_+_118938549_118938606	4.14677	HMX1.p2	AK045050|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK011242|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK148165|Rad51|19361|RAD51 homolog (S. cerevisiae)	NM_011234|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK160282|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK151157|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK151177|Rad51|19361|RAD51 homolog (S. cerevisiae)	BC027384|Rad51|19361|RAD51 homolog (S. cerevisiae)	D13803|Rad51|19361|RAD51 homolog (S. cerevisiae)	D13473|Rad51|19361|RAD51 homolog (S. cerevisiae)	AK076468|Rad51|19361|RAD51 homolog (S. cerevisiae)
mm9_v1_chr17_+_35516558_35516583	4.14632	HMX1.p2	AK037574|H2-Gs10|436493|MHC class I like protein GS10	AK136497|H2-Gs10|436493|MHC class I like protein GS10	NM_001143689|H2-Gs10|436493|MHC class I like protein GS10	BC010602|H2-Gs10|436493|MHC class I like protein GS10
mm9_v1_chr16_+_17619441_17619473	4.14614	HMX1.p2	AK019466|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164609|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164610|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164611|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_029945|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031685|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031029|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036380|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK035892|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036055|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164234|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK129354|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK138720|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164456|Smpd4|77626|sphingomyelin phosphodiesterase 4	BC026767|Smpd4|77626|sphingomyelin phosphodiesterase 4
mm9_v1_chr7_+_26412621_26412687	4.14287	HMX1.p2	NM_001036740|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	NM_146184|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	BC025206|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	AK154220|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	AK042388|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8	AK154901|B3gnt8|232984|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
mm9_v1_chr1_+_132762248_132762329	4.1377	HMX1.p2	BC116674|Faim3|69169|Fas apoptotic inhibitory molecule 3	BC118505|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr5_-_100465086_100465197	4.12601	HMX1.p2	AK011143|Hnrpdl|50926|heterogeneous nuclear ribonucleoprotein D-like
mm9_v1_chr8_+_108583449_108583790	4.10426	HMX1.p2	NM_010901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK147708|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK155087|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK051602|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK134054|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK039929|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	AK220187|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120900|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	BC120901|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	D85612|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887629|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887630|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	EU887631|Nfatc3|18021|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
mm9_v1_chr10_-_115922360_115922443	4.07213	HMX1.p2	AK019295|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr2_-_169968174_169968177	4.04036	HMX1.p2	AK139547|Zfp217|228913|zinc finger protein 217	NM_001159683|Zfp217|228913|zinc finger protein 217	AK163381|Zfp217|228913|zinc finger protein 217
mm9_v1_chr7_+_87377748_87377824	4.02259	HMX1.p2	AK166345|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK143704|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK085577|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK086166|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	NM_178752|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	AK084531|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene	BC037479|D330012F22Rik|269952|RIKEN cDNA D330012F22 gene
mm9_v1_chr3_-_94946256_94946295	4.01676	HMX1.p2	BC055879|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	BC094616|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	AK007540|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2	NM_027206|Tnfaip8l2|69769|tumor necrosis factor, alpha-induced protein 8-like 2
mm9_v1_chr9_-_57492978_57493044	4.01416	HMX1.p2	BC018394|Csk|12988|c-src tyrosine kinase	NM_007783|Csk|12988|c-src tyrosine kinase	AK156058|Csk|12988|c-src tyrosine kinase	AK170815|Csk|12988|c-src tyrosine kinase	BC052006|Csk|12988|c-src tyrosine kinase
mm9_v1_chrX_+_140752508_140752616	3.98068	HMX1.p2	BC137692|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)	NM_026247|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)	AK012910|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)	AK089102|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)	AK008162|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)	AK014790|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)	BC053004|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)	AK086546|Alg13|67574|asparagine-linked glycosylation 13 homolog (S. cerevisiae)
mm9_v1_chr17_+_57244828_57244840	3.97427	HMX1.p2	BC138767|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9	BC138770|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9	AK169471|Tnfsf9|21950|tumor necrosis factor (ligand) superfamily, member 9
mm9_v1_chr9_-_20781206_20781236	3.95394	HMX1.p2	AK170436|S1pr2|14739|sphingosine-1-phosphate receptor 2	AK085114|S1pr2|14739|sphingosine-1-phosphate receptor 2	NM_010333|S1pr2|14739|sphingosine-1-phosphate receptor 2
mm9_v1_chr13_+_55471165_55471252	3.93141	HMX1.p2	AK154944|Rgs14|51791|regulator of G-protein signaling 14	U85055|Rgs14|51791|regulator of G-protein signaling 14
mm9_v1_chr17_-_23810736_23810750	3.92079	HMX1.p2	BC085131|Thoc6|386612|THO complex 6 homolog (Drosophila)	NM_001008425|Thoc6|386612|THO complex 6 homolog (Drosophila)
mm9_v1_chr5_-_139936448_139936481	3.9173	HMX1.p2	BC044867|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	AK014271|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene	BC058580|3110082I17Rik|73212|RIKEN cDNA 3110082I17 gene
mm9_v1_chr14_+_26661614_26661734	3.90226	HMX1.p2	NM_013469|Anxa11|11744|annexin A11	U65986|Anxa11|11744|annexin A11	AK044203|Anxa11|11744|annexin A11	AK140375|Anxa11|11744|annexin A11	AK170850|Anxa11|11744|annexin A11	AK137158|Anxa11|11744|annexin A11	BC012875|Anxa11|11744|annexin A11
mm9_v1_chr11_+_77796215_77796321	3.89233	HMX1.p2	AK170155|Phf12|268448|PHD finger protein 12	AK089226|Phf12|268448|PHD finger protein 12	AK010807|Phf12|268448|PHD finger protein 12	AK155354|Phf12|268448|PHD finger protein 12	AK053787|Phf12|268448|PHD finger protein 12	NM_174852|Phf12|268448|PHD finger protein 12
mm9_v1_chr19_-_5272972_5273118	3.88979	HMX1.p2	AK164770|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	AK171969|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	AK154563|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	BC062886|Pacs1|107975|phosphofurin acidic cluster sorting protein 1	NM_153129|Pacs1|107975|phosphofurin acidic cluster sorting protein 1
mm9_v1_chr15_-_9459612_9459630	3.88233	HMX1.p2	AK040364|Il7r|16197|interleukin 7 receptor	AK040740|Il7r|16197|interleukin 7 receptor	NM_008372|Il7r|16197|interleukin 7 receptor
mm9_v1_chr12_+_4599810_4599868	3.8739	HMX1.p2	AK034367|Itsn2|20403|intersectin 2	NM_001198968|Itsn2|20403|intersectin 2	NM_001198969|Itsn2|20403|intersectin 2	NM_011365|Itsn2|20403|intersectin 2	BC138262|Itsn2|20403|intersectin 2	BC171950|Itsn2|20403|intersectin 2	AK163807|Itsn2|20403|intersectin 2	AK042449|Itsn2|20403|intersectin 2	AK029325|Itsn2|20403|intersectin 2
mm9_v1_chr2_+_125073450_125073494	3.84581	HMX1.p2	AK152459|Dut|110074|deoxyuridine triphosphatase	AK011407|Dut|110074|deoxyuridine triphosphatase	AK003076|Dut|110074|deoxyuridine triphosphatase	BC053693|Dut|110074|deoxyuridine triphosphatase	AK153285|Dut|110074|deoxyuridine triphosphatase
mm9_v1_chr18_+_56867378_56867570	3.83733	HMX1.p2	AK079511|Lmnb1|16906|lamin B1	AK132252|Lmnb1|16906|lamin B1	NM_010721|Lmnb1|16906|lamin B1	AK089110|Lmnb1|16906|lamin B1	BC052729|Lmnb1|16906|lamin B1	BC058392|Lmnb1|16906|lamin B1	M35153|Lmnb1|16906|lamin B1	X16705|Lmnb1|16906|lamin B1
mm9_v1_chrX_+_97821403_97821491	3.82692	HMX1.p2	NM_008446|Kif4|16571|kinesin family member 4	AK084837|Kif4|16571|kinesin family member 4	AK135179|Kif4|16571|kinesin family member 4	BC050946|Kif4|16571|kinesin family member 4	BC054537|Kif4|16571|kinesin family member 4	AK171938|Kif4|16571|kinesin family member 4
mm9_v1_chr5_-_111082269_111082383	3.82033	HMX1.p2	AK184847|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK172310|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)
mm9_v1_chr9_-_20781133_20781171	3.80234	HMX1.p2	BC096760|S1pr2|14739|sphingosine-1-phosphate receptor 2	AK159605|S1pr2|14739|sphingosine-1-phosphate receptor 2	AK134275|S1pr2|14739|sphingosine-1-phosphate receptor 2	AK151062|S1pr2|14739|sphingosine-1-phosphate receptor 2	AK153398|S1pr2|14739|sphingosine-1-phosphate receptor 2
mm9_v1_chr8_-_116372376_116372514	3.80089	HMX1.p2	BC094674|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK140876|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm9_v1_chr2_-_162486634_162486773	3.80052	HMX1.p2	AY026861|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	AY026862|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	AY026863|Ptprt|19281|protein tyrosine phosphatase, receptor type, T
mm9_v1_chr13_+_20182408_20182502	3.75493	HMX1.p2	AK155704|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)	AK220253|Elmo1|140580|engulfment and cell motility 1, ced-12 homolog (C. elegans)
mm9_v1_chr1_-_145549903_145549945	3.74653	HMX1.p2	BC027756|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK080861|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr8_+_97541591_97541631	3.74218	HMX1.p2	NM_173036|Gpr97|54672|G protein-coupled receptor 97	AK154648|Gpr97|54672|G protein-coupled receptor 97	AK155164|Gpr97|54672|G protein-coupled receptor 97	BC064726|Gpr97|54672|G protein-coupled receptor 97
mm9_v1_chr4_-_11313886_11313929	3.71506	HMX1.p2	AK140848|Esrp1|207920|epithelial splicing regulatory protein 1	NM_194055|Esrp1|207920|epithelial splicing regulatory protein 1
mm9_v1_chr2_-_26997842_26997961	3.71339	HMX1.p2	BC147286|Fam163b|109349|family with sequence similarity 163, member B	BC147287|Fam163b|109349|family with sequence similarity 163, member B
mm9_v1_chr1_-_54983048_54983087	3.70925	HMX1.p2	BC157918|Ankrd44|329154|ankyrin repeat domain 44	BC157951|Ankrd44|329154|ankyrin repeat domain 44	BC172102|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr14_+_57194455_57194523	3.70714	HMX1.p2	AK164513|Parp4|328417|poly (ADP-ribose) polymerase family, member 4	NM_001145978|Parp4|328417|poly (ADP-ribose) polymerase family, member 4	AK054229|Parp4|328417|poly (ADP-ribose) polymerase family, member 4	AK172907|Parp4|328417|poly (ADP-ribose) polymerase family, member 4
mm9_v1_chr4_+_140542775_140542957	3.70234	HMX1.p2	AK171554|Atp13a2|74772|ATPase type 13A2	NM_001164366|Atp13a2|74772|ATPase type 13A2	NM_029097|Atp13a2|74772|ATPase type 13A2	AK156104|Atp13a2|74772|ATPase type 13A2	BC023746|Atp13a2|74772|ATPase type 13A2	AK171305|Atp13a2|74772|ATPase type 13A2	BC042661|Atp13a2|74772|ATPase type 13A2	BC025028|Atp13a2|74772|ATPase type 13A2	AK191875|Atp13a2|74772|ATPase type 13A2	AK197341|Atp13a2|74772|ATPase type 13A2	AK204523|Atp13a2|74772|ATPase type 13A2
mm9_v1_chr17_+_35137851_35137869	3.69986	HMX1.p2	NM_011690|Vars|22321|valyl-tRNA synthetase
mm9_v1_chr19_+_4097894_4098000	3.69109	HMX1.p2	AK183323|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr19_+_39005433_39005482	3.67645	HMX1.p2	BC090671|Hells|15201|helicase, lymphoid specific	AK013266|Hells|15201|helicase, lymphoid specific	U25691|Hells|15201|helicase, lymphoid specific	AK147126|Hells|15201|helicase, lymphoid specific	AF155210|Hells|15201|helicase, lymphoid specific	NM_008234|Hells|15201|helicase, lymphoid specific	AK166636|Hells|15201|helicase, lymphoid specific	BC100394|Hells|15201|helicase, lymphoid specific
mm9_v1_chr1_+_59970358_59970454	3.66713	HMX1.p2	BC080299|Fam117b|72750|family with sequence similarity 117, member B
mm9_v1_chr7_-_85992096_85992145	3.60957	HMX1.p2	BC031930|Det1|76375|de-etiolated homolog 1 (Arabidopsis)	NM_029585|Det1|76375|de-etiolated homolog 1 (Arabidopsis)	AK011666|Det1|76375|de-etiolated homolog 1 (Arabidopsis)
mm9_v1_chrX_+_156411885_156411895	3.60644	HMX1.p2	AK200438|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr1_-_145549758_145549813	3.60603	HMX1.p2	BC031127|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	NM_145991|Cdc73|214498|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr12_+_119082333_119082371	3.59337	HMX1.p2	BC006933|Cdca7l|217946|cell division cycle associated 7 like	NM_146040|Cdca7l|217946|cell division cycle associated 7 like	AK149673|Cdca7l|217946|cell division cycle associated 7 like	BC071198|Cdca7l|217946|cell division cycle associated 7 like
mm9_v1_chr2_+_129024496_129024619	3.5829	HMX1.p2	NM_001159593|Slc20a1|20515|solute carrier family 20, member 1	NM_015747|Slc20a1|20515|solute carrier family 20, member 1	AK084159|Slc20a1|20515|solute carrier family 20, member 1	AK155506|Slc20a1|20515|solute carrier family 20, member 1	AK035898|Slc20a1|20515|solute carrier family 20, member 1	AK089184|Slc20a1|20515|solute carrier family 20, member 1	AK003059|Slc20a1|20515|solute carrier family 20, member 1	BC015085|Slc20a1|20515|solute carrier family 20, member 1
mm9_v1_chr13_-_32430412_32430498	3.57495	HMX1.p2	BC031788|Gmds|218138|GDP-mannose 4, 6-dehydratase	NM_146041|Gmds|218138|GDP-mannose 4, 6-dehydratase	BC093502|Gmds|218138|GDP-mannose 4, 6-dehydratase	AK086076|Gmds|218138|GDP-mannose 4, 6-dehydratase
mm9_v1_chr4_-_19497166_19497254	3.57127	HMX1.p2	BC036983|Cpne3|70568|copine III	AK220348|Cpne3|70568|copine III	AK146324|Cpne3|70568|copine III	AK017357|Cpne3|70568|copine III	AK036664|Cpne3|70568|copine III	NM_027769|Cpne3|70568|copine III	AK017651|Cpne3|70568|copine III
mm9_v1_chr1_-_54983211_54983245	3.57003	HMX1.p2	AK038343|Ankrd44|329154|ankyrin repeat domain 44	NM_001081433|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr19_-_60656627_60656934	3.56355	HMX1.p2	AK036606|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene	AK169791|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene	AK019216|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene	BC026363|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene	AK147382|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene	NM_001172096|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene	NM_001172097|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene	NM_030197|2700078E11Rik|78832|RIKEN cDNA 2700078E11 gene
mm9_v1_chr19_+_8810274_8810348	3.55833	HMX1.p2	AK145704|Wdr74|107071|WD repeat domain 74	AK077521|Wdr74|107071|WD repeat domain 74	BC019968|Wdr74|107071|WD repeat domain 74	NM_134139|Wdr74|107071|WD repeat domain 74
mm9_v1_chr4_-_123427465_123427587	3.55403	HMX1.p2	AK006378|Akirin1|68050|akirin 1	AK078055|Akirin1|68050|akirin 1	AB041594|Akirin1|68050|akirin 1	AK160087|Akirin1|68050|akirin 1	AK168201|Akirin1|68050|akirin 1	AK168214|Akirin1|68050|akirin 1	AK146017|Akirin1|68050|akirin 1	AK168530|Akirin1|68050|akirin 1	AK159632|Akirin1|68050|akirin 1	NM_023423|Akirin1|68050|akirin 1	BC003291|Akirin1|68050|akirin 1
mm9_v1_chr13_-_51889012_51889103	3.53391	HMX1.p2	BC049780|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	NM_013660|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	AK132688|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
mm9_v1_chr4_-_34830178_34830200	3.53271	HMX1.p2	AK017652|Zfp292|30046|zinc finger protein 292	AK018067|Zfp292|30046|zinc finger protein 292	NM_013889|Zfp292|30046|zinc finger protein 292	BC036997|Zfp292|30046|zinc finger protein 292
mm9_v1_chr7_+_56044379_56044458	3.52141	HMX1.p2	AK049640|Zdhhc13|243983|zinc finger, DHHC domain containing 13	AK146196|Zdhhc13|243983|zinc finger, DHHC domain containing 13	BC019493|Zdhhc13|243983|zinc finger, DHHC domain containing 13	BC046599|Zdhhc13|243983|zinc finger, DHHC domain containing 13	AK145855|Zdhhc13|243983|zinc finger, DHHC domain containing 13
mm9_v1_chrX_+_104451216_104451366	3.51942	HMX1.p2	AK171832|Gpr174|213439|G protein-coupled receptor 174	NM_001177781|Gpr174|213439|G protein-coupled receptor 174	AK156069|Gpr174|213439|G protein-coupled receptor 174	AK153611|Gpr174|213439|G protein-coupled receptor 174	NM_001033251|Gpr174|213439|G protein-coupled receptor 174
mm9_v1_chr19_+_46130978_46131205	3.49053	HMX1.p2	NM_001081214|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK147947|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK044522|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK122322|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	BC066048|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1	AK180476|Pprc1|226169|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm9_v1_chr10_+_79451369_79451426	3.47166	HMX1.p2	BC018482|Cnn2|12798|calponin 2	BC009144|Cnn2|12798|calponin 2	AK189304|Cnn2|12798|calponin 2	BC008181|Cnn2|12798|calponin 2
mm9_v1_chr6_+_42214999_42215177	3.45636	HMX1.p2	NM_007610|Casp2|12366|caspase 2	Y13085|Casp2|12366|caspase 2	BC034262|Casp2|12366|caspase 2	AK170649|Casp2|12366|caspase 2	AK052396|Casp2|12366|caspase 2	AK133829|Casp2|12366|caspase 2	AK042072|Casp2|12366|caspase 2	D28492|Casp2|12366|caspase 2	AK199368|Casp2|12366|caspase 2	AK210521|Casp2|12366|caspase 2
mm9_v1_chr2_-_60590923_60591029	3.45417	HMX1.p2	AK201259|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chrX_+_20002875_20002927	3.44611	HMX1.p2	AK077755|Phf16|382207|PHD finger protein 16	AK129091|Phf16|382207|PHD finger protein 16
mm9_v1_chr6_+_83293435_83293444	3.43311	HMX1.p2	AK196174|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr5_+_65194814_65194820	3.43023	HMX1.p2	AK010713|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr2_-_51828671_51828727	3.42983	HMX1.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chrX_+_156065141_156065596	3.40171	HMX1.p2	AK049182|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK172022|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK080930|Sh3kbp1|58194|SH3-domain kinase binding protein 1	NM_001135727|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK038540|Sh3kbp1|58194|SH3-domain kinase binding protein 1	AK208632|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr7_+_147222289_147222346	3.39423	HMX1.p2	NM_027201|Zfp511|69752|zinc finger protein 511	AK010407|Zfp511|69752|zinc finger protein 511
mm9_v1_chr2_-_92210955_92211192	3.39239	HMX1.p2	HM141800|Gyltl1b|228366|glycosyltransferase-like 1B	AK220181|Gyltl1b|228366|glycosyltransferase-like 1B	BC096655|Gyltl1b|228366|glycosyltransferase-like 1B	BC116715|Gyltl1b|228366|glycosyltransferase-like 1B	AK077630|Gyltl1b|228366|glycosyltransferase-like 1B	BC058199|Gyltl1b|228366|glycosyltransferase-like 1B	AK081797|Gyltl1b|228366|glycosyltransferase-like 1B	AY742914|Gyltl1b|228366|glycosyltransferase-like 1B	AY742915|Gyltl1b|228366|glycosyltransferase-like 1B	NM_001166633|Gyltl1b|228366|glycosyltransferase-like 1B	NM_172670|Gyltl1b|228366|glycosyltransferase-like 1B
mm9_v1_chr18_-_36886307_36886353	3.38747	HMX1.p2	BC057889|Cd14|12475|CD14 antigen	NM_009841|Cd14|12475|CD14 antigen
mm9_v1_chr6_-_6167086_6167104	3.38698	HMX1.p2	AK029020|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr7_+_3655919_3655955	3.38515	HMX1.p2	BC012491|Rps9|76846|ribosomal protein S9
mm9_v1_chr19_+_7049425_7049555	3.37381	HMX1.p2	AK141152|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	X97490|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	BC082545|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B	NM_008889|Ppp1r14b|18938|protein phosphatase 1, regulatory (inhibitor) subunit 14B
mm9_v1_chr6_+_6813333_6813333	3.37148	HMX1.p2	EF535989|Dlx6|13396|distal-less homeobox 6	EF535990|Dlx6|13396|distal-less homeobox 6	NM_010057|Dlx6|13396|distal-less homeobox 6
mm9_v1_chr5_-_111082387_111082407	3.36723	HMX1.p2	BC024616|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK146006|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK088355|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK052601|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	NM_153570|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)	AK090024|Noc4l|100608|nucleolar complex associated 4 homolog (S. cerevisiae)
mm9_v1_chr15_+_59205752_59205871	3.35669	HMX1.p2	NM_001164604|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	NM_026746|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK003685|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK051277|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	BC009125|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK188685|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK211545|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)	AK212165|Nsmce2|68501|non-SMC element 2 homolog (MMS21, S. cerevisiae)
mm9_v1_chr9_+_106073523_106073570	3.34626	HMX1.p2	BC031502|Wdr82|77305|WD repeat domain containing 82	EF011615|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr7_+_86058817_86058936	3.3267	HMX1.p2	AK005528|Isg20|57444|interferon-stimulated protein
mm9_v1_chr11_+_82930294_82930379	3.32622	HMX1.p2	AK138710|Slfn1|20555|schlafen 1	AF099972|Slfn1|20555|schlafen 1	NM_011407|Slfn1|20555|schlafen 1	BC052869|Slfn1|20555|schlafen 1
mm9_v1_chr6_-_6167113_6167172	3.32498	HMX1.p2	AK151180|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK152237|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AF164632|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK150496|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_001177572|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_015829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr8_-_124984513_124984632	3.31852	HMX1.p2	AF133714|Snai3|30927|snail homolog 3 (Drosophila)	AF195655|Snai3|30927|snail homolog 3 (Drosophila)	BC100724|Snai3|30927|snail homolog 3 (Drosophila)	BC100726|Snai3|30927|snail homolog 3 (Drosophila)	BC100727|Snai3|30927|snail homolog 3 (Drosophila)	AK089285|Snai3|30927|snail homolog 3 (Drosophila)	AK042234|Snai3|30927|snail homolog 3 (Drosophila)	NM_013914|Snai3|30927|snail homolog 3 (Drosophila)	AK153633|Snai3|30927|snail homolog 3 (Drosophila)
mm9_v1_chr5_+_3344201_3344322	3.31278	HMX1.p2	AK078973|Cdk6|12571|cyclin-dependent kinase 6	AF132483|Cdk6|12571|cyclin-dependent kinase 6	NM_009873|Cdk6|12571|cyclin-dependent kinase 6	BC119360|Cdk6|12571|cyclin-dependent kinase 6	BC120595|Cdk6|12571|cyclin-dependent kinase 6
mm9_v1_chr8_+_34887177_34887229	3.30552	HMX1.p2	AK178391|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr7_+_128084130_128084187	3.28834	HMX1.p2	AK002918|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr3_+_145812796_145812808	3.28043	HMX1.p2	AK159172|Mcoln2|68279|mucolipin 2	NM_026656|Mcoln2|68279|mucolipin 2	AF503575|Mcoln2|68279|mucolipin 2
mm9_v1_chr5_+_65194627_65194653	3.27023	HMX1.p2	AK157576|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr3_+_102862151_102862295	3.25571	HMX1.p2	X13664|Nras|18176|neuroblastoma ras oncogene	NM_010937|Nras|18176|neuroblastoma ras oncogene	AK011704|Nras|18176|neuroblastoma ras oncogene	AK165960|Nras|18176|neuroblastoma ras oncogene	AK150357|Nras|18176|neuroblastoma ras oncogene	BC058755|Nras|18176|neuroblastoma ras oncogene	BC014704|Nras|18176|neuroblastoma ras oncogene	BC051443|Nras|18176|neuroblastoma ras oncogene
mm9_v1_chr5_+_115791215_115791352	3.25078	HMX1.p2	AK007514|Triap1|69076|TP53 regulated inhibitor of apoptosis 1	NM_026933|Triap1|69076|TP53 regulated inhibitor of apoptosis 1	U61156|Triap1|69076|TP53 regulated inhibitor of apoptosis 1	BC030325|Triap1|69076|TP53 regulated inhibitor of apoptosis 1
mm9_v1_chr19_-_3903069_3903081	3.24956	HMX1.p2	AF218254|Tcirg1|27060|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
mm9_v1_chr1_+_133867185_133867185	3.24775	HMX1.p2	BC031381|Slc45a3|212980|solute carrier family 45, member 3	NM_145977|Slc45a3|212980|solute carrier family 45, member 3
mm9_v1_chr3_-_127599117_127599275	3.23669	HMX1.p2	BC116791|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	BC116793|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK017758|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK012470|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK163003|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	AK162420|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene	NM_027482|5730508B09Rik|70617|RIKEN cDNA 5730508B09 gene
mm9_v1_chr18_-_62339609_62339644	3.23604	HMX1.p2	BC032883|Adrb2|11555|adrenergic receptor, beta 2	NM_007420|Adrb2|11555|adrenergic receptor, beta 2	AK080241|Adrb2|11555|adrenergic receptor, beta 2	AK080276|Adrb2|11555|adrenergic receptor, beta 2
mm9_v1_chr9_-_44113704_44113766	3.23148	HMX1.p2	BC029091|Hinfp|102423|histone H4 transcription factor	AK049348|Hinfp|102423|histone H4 transcription factor	AK049633|Hinfp|102423|histone H4 transcription factor	NM_172162|Hinfp|102423|histone H4 transcription factor
mm9_v1_chr1_+_173697246_173697357	3.22604	HMX1.p2	AK020012|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK156445|Slamf1|27218|signaling lymphocytic activation molecule family member 1	NM_013730|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK172138|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK037780|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK036429|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF160990|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149791|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149792|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117095|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117099|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196796|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196797|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196798|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196799|Slamf1|27218|signaling lymphocytic activation molecule family member 1
mm9_v1_chr13_+_55471092_55471131	3.21677	HMX1.p2	NM_016758|Rgs14|51791|regulator of G-protein signaling 14	BC030321|Rgs14|51791|regulator of G-protein signaling 14
mm9_v1_chr2_+_149230984_149231068	3.21379	HMX1.p2	AB036743|Cst10|58214|cystatin 10 (chondrocytes)	NM_021405|Cst10|58214|cystatin 10 (chondrocytes)	BC048364|Cst10|58214|cystatin 10 (chondrocytes)
mm9_v1_chr7_-_147178381_147178450	3.21361	HMX1.p2	AK150411|Adam8|11501|a disintegrin and metallopeptidase domain 8	NM_007403|Adam8|11501|a disintegrin and metallopeptidase domain 8	X13335|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK155772|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK089086|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK171060|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK152769|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK153065|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK160041|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK155912|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK152675|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK171022|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK089169|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK170019|Adam8|11501|a disintegrin and metallopeptidase domain 8	BC025584|Adam8|11501|a disintegrin and metallopeptidase domain 8
mm9_v1_chr4_+_140562312_140562396	3.21194	HMX1.p2	AK182171|Atp13a2|74772|ATPase type 13A2	AK190516|Atp13a2|74772|ATPase type 13A2	AK196910|Atp13a2|74772|ATPase type 13A2
mm9_v1_chr6_-_122560002_122560015	3.21033	HMX1.p2	BC103565|Gdf3|14562|growth differentiation factor 3	BC101963|Gdf3|14562|growth differentiation factor 3	BC101964|Gdf3|14562|growth differentiation factor 3	BC101965|Gdf3|14562|growth differentiation factor 3	AK082877|Gdf3|14562|growth differentiation factor 3	AK146174|Gdf3|14562|growth differentiation factor 3	AK167962|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr10_-_126778634_126778717	3.20847	HMX1.p2	AF026305|Gli1|14632|GLI-Kruppel family member GLI1	NM_010296|Gli1|14632|GLI-Kruppel family member GLI1	AB025922|Gli1|14632|GLI-Kruppel family member GLI1
mm9_v1_chrX_-_20508314_20508407	3.19604	HMX1.p2	X12905|Cfp|18636|complement factor properdin
mm9_v1_chr5_+_148242018_148242155	3.17131	HMX1.p2	NM_028291|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr6_+_113647492_113647666	3.15931	HMX1.p2	AK156197|Tatdn2|381801|TatD DNase domain containing 2	NM_001033463|Tatdn2|381801|TatD DNase domain containing 2	BC141065|Tatdn2|381801|TatD DNase domain containing 2	BC145318|Tatdn2|381801|TatD DNase domain containing 2	AK220217|Tatdn2|381801|TatD DNase domain containing 2
mm9_v1_chr14_+_103469432_103469514	3.15723	HMX1.p2	AK085741|Cln5|211286|ceroid-lipofuscinosis, neuronal 5	NM_001033242|Cln5|211286|ceroid-lipofuscinosis, neuronal 5	AK043247|Cln5|211286|ceroid-lipofuscinosis, neuronal 5
mm9_v1_chr18_-_36886375_36886388	3.15223	HMX1.p2	AK149744|Cd14|12475|CD14 antigen
mm9_v1_chr11_+_77796383_77796501	3.12733	HMX1.p2	AK141796|Phf12|268448|PHD finger protein 12
mm9_v1_chr11_+_77796714_77796777	3.12146	HMX1.p2	BC043080|Phf12|268448|PHD finger protein 12
mm9_v1_chr6_-_6167034_6167063	3.12004	HMX1.p2	AK002829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK012670|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr2_+_32731648_32731777	3.10615	HMX1.p2	NM_146119|Fam129b|227737|family with sequence similarity 129, member B	AK146953|Fam129b|227737|family with sequence similarity 129, member B	AK033735|Fam129b|227737|family with sequence similarity 129, member B	AK152207|Fam129b|227737|family with sequence similarity 129, member B	AK153489|Fam129b|227737|family with sequence similarity 129, member B	AK170512|Fam129b|227737|family with sequence similarity 129, member B	AK051396|Fam129b|227737|family with sequence similarity 129, member B	AK150642|Fam129b|227737|family with sequence similarity 129, member B	AK149818|Fam129b|227737|family with sequence similarity 129, member B	BC027843|Fam129b|227737|family with sequence similarity 129, member B	AK149888|Fam129b|227737|family with sequence similarity 129, member B	AK046583|Fam129b|227737|family with sequence similarity 129, member B
mm9_v1_chr6_-_122560022_122560104	3.09947	HMX1.p2	S52658|Gdf3|14562|growth differentiation factor 3	AK160533|Gdf3|14562|growth differentiation factor 3	AK152457|Gdf3|14562|growth differentiation factor 3	NM_008108|Gdf3|14562|growth differentiation factor 3	L06443|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr4_-_133684552_133684560	3.0845	HMX1.p2	AK179341|Sh3bgrl3|73723|SH3 domain binding glutamic acid-rich protein-like 3
mm9_v1_chr14_-_52857246_52857246	3.06876	HMX1.p2	AY863219|Chd8|67772|chromodomain helicase DNA binding protein 8	DQ190419|Chd8|67772|chromodomain helicase DNA binding protein 8	NM_201637|Chd8|67772|chromodomain helicase DNA binding protein 8
mm9_v1_chr2_+_118639930_118640030	3.0659	HMX1.p2	AK028590|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	AK012148|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	AK036374|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	AK013184|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	BC031709|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed
mm9_v1_chr10_-_94407211_94407349	3.05564	HMX1.p2	AF190578|Plxnc1|54712|plexin C1	NM_018797|Plxnc1|54712|plexin C1
mm9_v1_chr4_-_151851624_151851635	3.05494	HMX1.p2	AK143166|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm9_v1_chr7_+_56044372_56044374	3.04769	HMX1.p2	AK010382|Zdhhc13|243983|zinc finger, DHHC domain containing 13	NM_028031|Zdhhc13|243983|zinc finger, DHHC domain containing 13
mm9_v1_chr14_+_56364564_56364843	3.03657	HMX1.p2	AK146020|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK139689|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK083861|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK015585|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene	AK219900|2610027L16Rik|67842|RIKEN cDNA 2610027L16 gene
mm9_v1_chr11_+_62633937_62634006	3.02964	HMX1.p2	AK053139|Trim16|94092|tripartite motif-containing 16	BC052821|Trim16|94092|tripartite motif-containing 16	AF449496|Trim16|94092|tripartite motif-containing 16
mm9_v1_chr4_-_151851574_151851597	2.98775	HMX1.p2	BC039178|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	NM_010598|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2	U31908|Kcnab2|16498|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm9_v1_chr4_-_144836658_144836801	2.9815	HMX1.p2	X76401|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK170464|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	M60469|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	M59378|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	BC141405|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK155385|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK004752|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK004844|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK085490|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK140332|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK153301|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	NM_011610|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b	AK156996|Tnfrsf1b|21938|tumor necrosis factor receptor superfamily, member 1b
mm9_v1_chr1_-_183074302_183074339	2.97504	HMX1.p2	AK004676|Nvl|67459|nuclear VCP-like	AK140509|Nvl|67459|nuclear VCP-like
mm9_v1_chr17_+_28465549_28465594	2.97291	HMX1.p2	BC006039|Rpl10a|19896|ribosomal protein L10A	BC083346|Rpl10a|19896|ribosomal protein L10A
mm9_v1_chr19_+_25685026_25685032	2.9602	HMX1.p2	AF541936|Dmrt3|240590|doublesex and mab-3 related transcription factor 3	NM_177360|Dmrt3|240590|doublesex and mab-3 related transcription factor 3	BC052041|Dmrt3|240590|doublesex and mab-3 related transcription factor 3
mm9_v1_chr15_+_37163001_37163168	2.95498	HMX1.p2	BC055035|Grhl2|252973|grainyhead-like 2 (Drosophila)	AF411213|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr17_+_28465962_28465972	2.93961	HMX1.p2	AK177057|Rpl10a|19896|ribosomal protein L10A	AK193763|Rpl10a|19896|ribosomal protein L10A	AK200448|Rpl10a|19896|ribosomal protein L10A	AK215262|Rpl10a|19896|ribosomal protein L10A
mm9_v1_chr7_-_26004848_26004855	2.93301	HMX1.p2	AK010701|Dedd2|67379|death effector domain-containing DNA binding protein 2
mm9_v1_chr13_+_93125151_93125213	2.93295	HMX1.p2	L26316|Dhfr|13361|dihydrofolate reductase	BC005796|Dhfr|13361|dihydrofolate reductase	X56066|Dhfr|13361|dihydrofolate reductase	M10722|Dhfr|13361|dihydrofolate reductase
mm9_v1_chr16_-_48772068_48772250	2.93014	HMX1.p2	BC104350|Trat1|77647|T cell receptor associated transmembrane adaptor 1	BC104351|Trat1|77647|T cell receptor associated transmembrane adaptor 1	NM_198297|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AJ297969|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK138735|Trat1|77647|T cell receptor associated transmembrane adaptor 1	AK030807|Trat1|77647|T cell receptor associated transmembrane adaptor 1
mm9_v1_chr1_+_154613692_154613762	2.92507	HMX1.p2	AK159407|Arpc5|67771|actin related protein 2/3 complex, subunit 5	AK017985|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr1_+_132762353_132762436	2.92241	HMX1.p2	AK007714|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK155943|Faim3|69169|Fas apoptotic inhibitory molecule 3	NM_026976|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK156523|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227385|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227386|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227387|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227388|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227389|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227390|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227391|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227392|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227393|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr17_+_33102747_33102840	2.92156	HMX1.p2	NM_153063|Zfp472|224691|zinc finger protein 472	AK142395|Zfp472|224691|zinc finger protein 472	BC027407|Zfp472|224691|zinc finger protein 472	AY195875|Zfp472|224691|zinc finger protein 472	BC023090|Zfp472|224691|zinc finger protein 472
mm9_v1_chr10_+_93103715_93103796	2.92135	HMX1.p2	NM_021320|Ntn4|57764|netrin 4
mm9_v1_chr12_+_101122706_101122828	2.92121	HMX1.p2	NM_028354|Tdp1|104884|tyrosyl-DNA phosphodiesterase 1	AK033868|Tdp1|104884|tyrosyl-DNA phosphodiesterase 1	AK014855|Tdp1|104884|tyrosyl-DNA phosphodiesterase 1	AK088990|Tdp1|104884|tyrosyl-DNA phosphodiesterase 1	AK137004|Tdp1|104884|tyrosyl-DNA phosphodiesterase 1	AK079006|Tdp1|104884|tyrosyl-DNA phosphodiesterase 1
mm9_v1_chr1_-_188573165_188573236	2.91841	HMX1.p2	AK007616|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013217|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	BC006787|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK010658|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK087997|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013204|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK169088|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	NM_026041|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)
mm9_v1_chr11_-_33063024_33063083	2.90109	HMX1.p2	BC085278|Npm1|18148|nucleophosmin 1	BC092378|Npm1|18148|nucleophosmin 1	M33212|Npm1|18148|nucleophosmin 1	NM_008722|Npm1|18148|nucleophosmin 1	BC054755|Npm1|18148|nucleophosmin 1	BC090843|Npm1|18148|nucleophosmin 1	AK088923|Npm1|18148|nucleophosmin 1	AK145124|Npm1|18148|nucleophosmin 1	AK150164|Npm1|18148|nucleophosmin 1	AK153901|Npm1|18148|nucleophosmin 1	AK005498|Npm1|18148|nucleophosmin 1	AK028253|Npm1|18148|nucleophosmin 1	AK135517|Npm1|18148|nucleophosmin 1	AK145813|Npm1|18148|nucleophosmin 1	BC089546|Npm1|18148|nucleophosmin 1	AK005420|Npm1|18148|nucleophosmin 1	AK028370|Npm1|18148|nucleophosmin 1	AK165860|Npm1|18148|nucleophosmin 1	GU214027|Npm1|18148|nucleophosmin 1
mm9_v1_chr7_+_49276094_49276094	2.89966	HMX1.p2	NM_001111282|Hmg1l1|434174|high-mobility group (nonhistone chromosomal) protein 1-like 1
mm9_v1_chr2_+_146838735_146838857	2.88233	HMX1.p2	AK168037|Xrn2|24128|5'-3' exoribonuclease 2	AK031247|Xrn2|24128|5'-3' exoribonuclease 2	AK167019|Xrn2|24128|5'-3' exoribonuclease 2	BC054743|Xrn2|24128|5'-3' exoribonuclease 2	NM_011917|Xrn2|24128|5'-3' exoribonuclease 2	AK011711|Xrn2|24128|5'-3' exoribonuclease 2	AK053643|Xrn2|24128|5'-3' exoribonuclease 2	AK133654|Xrn2|24128|5'-3' exoribonuclease 2	AK163899|Xrn2|24128|5'-3' exoribonuclease 2	BC052395|Xrn2|24128|5'-3' exoribonuclease 2	AK004800|Xrn2|24128|5'-3' exoribonuclease 2	BC052823|Xrn2|24128|5'-3' exoribonuclease 2	D38517|Xrn2|24128|5'-3' exoribonuclease 2
mm9_v1_chr3_+_152059620_152059689	2.87832	HMX1.p2	BC060614|Zzz3|108946|zinc finger, ZZ domain containing 3	NM_198416|Zzz3|108946|zinc finger, ZZ domain containing 3
mm9_v1_chr12_-_57446800_57446880	2.86073	HMX1.p2	AK077125|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK154318|Mbip|217588|MAP3K12 binding inhibitory protein 1	AK171164|Mbip|217588|MAP3K12 binding inhibitory protein 1	BC002277|Mbip|217588|MAP3K12 binding inhibitory protein 1	NM_145442|Mbip|217588|MAP3K12 binding inhibitory protein 1
mm9_v1_chr12_-_71203819_71203840	2.86051	HMX1.p2	AY515727|Nin|18080|ninein	NM_001081453|Nin|18080|ninein
mm9_v1_chr14_+_103469532_103469618	2.84441	HMX1.p2	BC141314|Cln5|211286|ceroid-lipofuscinosis, neuronal 5	BC141315|Cln5|211286|ceroid-lipofuscinosis, neuronal 5	AK144635|Cln5|211286|ceroid-lipofuscinosis, neuronal 5	BC025487|Cln5|211286|ceroid-lipofuscinosis, neuronal 5	AK032293|Cln5|211286|ceroid-lipofuscinosis, neuronal 5
mm9_v1_chr4_+_133074877_133074912	2.82479	HMX1.p2	NM_001083916|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene	NM_133707|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene
mm9_v1_chr15_+_61869529_61869619	2.81645	HMX1.p2	AK043790|Pvt1|19296|plasmacytoma variant translocation 1	AK030859|Pvt1|19296|plasmacytoma variant translocation 1	AK165927|Pvt1|19296|plasmacytoma variant translocation 1	AK043252|Pvt1|19296|plasmacytoma variant translocation 1	AK169445|Pvt1|19296|plasmacytoma variant translocation 1	AK165907|Pvt1|19296|plasmacytoma variant translocation 1	AK090048|Pvt1|19296|plasmacytoma variant translocation 1	AK169927|Pvt1|19296|plasmacytoma variant translocation 1
mm9_v1_chr8_-_116372637_116372742	2.80967	HMX1.p2	AK035797|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK081122|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	NM_172466|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	AK053851|Adamts18|208936|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm9_v1_chr10_+_79727708_79727903	2.79839	HMX1.p2	NM_001122604|Dazap1|70248|DAZ associated protein 1	NM_001122605|Dazap1|70248|DAZ associated protein 1	NM_133188|Dazap1|70248|DAZ associated protein 1	AK152314|Dazap1|70248|DAZ associated protein 1	AK152345|Dazap1|70248|DAZ associated protein 1	BC049355|Dazap1|70248|DAZ associated protein 1	BC058775|Dazap1|70248|DAZ associated protein 1	AF225910|Dazap1|70248|DAZ associated protein 1	AK148023|Dazap1|70248|DAZ associated protein 1
mm9_v1_chr11_-_120486280_120486339	2.79707	HMX1.p2	BC026403|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC040759|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026637|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	BC026650|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AY251540|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK051725|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	AK135484|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)	NM_153056|Sirt7|209011|sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae)
mm9_v1_chr7_-_53176582_53176892	2.79483	HMX1.p2	BC001999|Emp3|13732|epithelial membrane protein 3	AF011750|Emp3|13732|epithelial membrane protein 3	U87948|Emp3|13732|epithelial membrane protein 3	NM_010129|Emp3|13732|epithelial membrane protein 3
mm9_v1_chr1_-_175157322_175157359	2.79289	HMX1.p2	BC125457|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC125455|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC145138|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	J05018|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	NM_010184|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide
mm9_v1_chr16_+_16892913_16892944	2.79261	HMX1.p2	
mm9_v1_chr13_-_31065909_31065982	2.7893	HMX1.p2	BC048154|Exoc2|66482|exocyst complex component 2	BC049102|Exoc2|66482|exocyst complex component 2	NM_025588|Exoc2|66482|exocyst complex component 2	AK050068|Exoc2|66482|exocyst complex component 2	AK032766|Exoc2|66482|exocyst complex component 2	AK042744|Exoc2|66482|exocyst complex component 2
mm9_v1_chr7_-_152125521_152125630	2.78223	HMX1.p2	AK005352|Ccnd1|12443|cyclin D1
mm9_v1_chr7_-_56136965_56137089	2.77669	HMX1.p2	AY957576|E2f8|108961|E2F transcription factor 8
mm9_v1_chr3_-_88173471_88173641	2.75229	HMX1.p2	BC100687|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC101948|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC141238|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC145565|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC069910|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	BC055868|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	NM_031368|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1
mm9_v1_chr19_+_9026020_9026327	2.74082	HMX1.p2	AK199642|Mta2|23942|metastasis-associated gene family, member 2	AK219174|Mta2|23942|metastasis-associated gene family, member 2	AK195366|Mta2|23942|metastasis-associated gene family, member 2	AK209683|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr17_+_35530986_35531054	2.73664	HMX1.p2	AK013097|H2-Q8|15019|histocompatibility 2, Q region locus 8	NM_023124|H2-Q8|15019|histocompatibility 2, Q region locus 8
mm9_v1_chr10_+_39089594_39089612	2.73241	HMX1.p2	AK156584|Fyn|14360|Fyn proto-oncogene	AK171646|Fyn|14360|Fyn proto-oncogene	NM_001122892|Fyn|14360|Fyn proto-oncogene	NM_001122893|Fyn|14360|Fyn proto-oncogene	NM_008054|Fyn|14360|Fyn proto-oncogene	BC092217|Fyn|14360|Fyn proto-oncogene
mm9_v1_chr7_+_116084192_116084237	2.72689	HMX1.p2	
mm9_v1_chr7_+_148264127_148264198	2.71543	HMX1.p2	BC090668|Pkp3|56460|plakophilin 3	NM_001162924|Pkp3|56460|plakophilin 3
mm9_v1_chr2_+_118639738_118639738	2.70591	HMX1.p2	AK006328|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	NM_026412|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed
mm9_v1_chr17_+_34729159_34729288	2.67969	HMX1.p2	AK159623|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC010287|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC062147|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr1_+_133424461_133424479	2.65517	HMX1.p2	BC090647|Fam72a|108900|family with sequence similarity 72, member A
mm9_v1_chr10_+_93103936_93104198	2.65375	HMX1.p2	AF281278|Ntn4|57764|netrin 4	BC119182|Ntn4|57764|netrin 4	BC119184|Ntn4|57764|netrin 4	AF268066|Ntn4|57764|netrin 4
mm9_v1_chr7_+_149135990_149136036	2.64854	HMX1.p2	AY533672|Brsk2|75770|BR serine/threonine kinase 2	AY533673|Brsk2|75770|BR serine/threonine kinase 2	AY533674|Brsk2|75770|BR serine/threonine kinase 2	NM_001009929|Brsk2|75770|BR serine/threonine kinase 2	NM_001009930|Brsk2|75770|BR serine/threonine kinase 2
mm9_v1_chr13_+_93125099_93125109	2.64718	HMX1.p2	V00734|Dhfr|13361|dihydrofolate reductase	AK031241|Dhfr|13361|dihydrofolate reductase
mm9_v1_chr14_-_69903072_69903169	2.63796	HMX1.p2	AF288621|Slc25a37|67712|solute carrier family 25, member 37	AF361699|Slc25a37|67712|solute carrier family 25, member 37	AK050414|Slc25a37|67712|solute carrier family 25, member 37	NM_026331|Slc25a37|67712|solute carrier family 25, member 37	AK006155|Slc25a37|67712|solute carrier family 25, member 37
mm9_v1_chr1_-_130488785_130488878	2.63691	HMX1.p2	Z80112|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	U59760|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	BC098322|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	AB000803|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	BC031665|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	Z80111|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	NM_009911|Cxcr4|12767|chemokine (C-X-C motif) receptor 4	X99582|Cxcr4|12767|chemokine (C-X-C motif) receptor 4
mm9_v1_chr6_-_124838150_124838229	2.63464	HMX1.p2	AK161775|Cd4|12504|CD4 antigen	BC039137|Cd4|12504|CD4 antigen	AK040115|Cd4|12504|CD4 antigen	AK153707|Cd4|12504|CD4 antigen	AK153966|Cd4|12504|CD4 antigen	NM_013488|Cd4|12504|CD4 antigen	X04836|Cd4|12504|CD4 antigen
mm9_v1_chr4_-_73436505_73436616	2.63447	HMX1.p2	NM_001017427|Rasef|242505|RAS and EF hand domain containing	AK132691|Rasef|242505|RAS and EF hand domain containing
mm9_v1_chr2_+_118752232_118752411	2.61591	HMX1.p2	NM_028117|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154555|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK155115|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC043700|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK154636|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK159357|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK011230|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC085479|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	AK171614|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	BC026886|Chst14|72136|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm9_v1_chr1_-_75502814_75502969	2.61392	HMX1.p2	AK029863|Obsl1|98733|obscurin-like 1	AK162473|Obsl1|98733|obscurin-like 1	AK034852|Obsl1|98733|obscurin-like 1
mm9_v1_chr9_+_108239210_108239322	2.60848	HMX1.p2	AK177758|Rhoa|11848|ras homolog gene family, member A
mm9_v1_chr16_+_10545494_10545538	2.60478	HMX1.p2	AK089327|Clec16a|74374|C-type lectin domain family 16, member A	AK156927|Clec16a|74374|C-type lectin domain family 16, member A	AK170754|Clec16a|74374|C-type lectin domain family 16, member A	AK171134|Clec16a|74374|C-type lectin domain family 16, member A	BC138907|Clec16a|74374|C-type lectin domain family 16, member A	BC138909|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr8_-_86222963_86223117	2.59391	HMX1.p2	AK134792|Pkn1|320795|protein kinase N1	BC052923|Pkn1|320795|protein kinase N1	NM_177262|Pkn1|320795|protein kinase N1	AK170556|Pkn1|320795|protein kinase N1	AK050643|Pkn1|320795|protein kinase N1
mm9_v1_chr11_-_81387006_81387040	2.59308	HMX1.p2	BC139179|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	BC139181|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	AK131752|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	NM_001033765|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene
mm9_v1_chr2_-_162486792_162486829	2.59039	HMX1.p2	AF162856|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	AF162857|Ptprt|19281|protein tyrosine phosphatase, receptor type, T	AF152556|Ptprt|19281|protein tyrosine phosphatase, receptor type, T
mm9_v1_chr8_-_124948837_124948876	2.57543	HMX1.p2	
mm9_v1_chr6_+_88034684_88034764	2.5719	HMX1.p2	
mm9_v1_chr12_+_36719492_36719512	2.57152	HMX1.p2	AK007677|Agr2|23795|anterior gradient 2 (Xenopus laevis)	BC013334|Agr2|23795|anterior gradient 2 (Xenopus laevis)	AF044262|Agr2|23795|anterior gradient 2 (Xenopus laevis)	NM_011783|Agr2|23795|anterior gradient 2 (Xenopus laevis)	AB016592|Agr2|23795|anterior gradient 2 (Xenopus laevis)
mm9_v1_chr3_+_90052083_90052183	2.57054	HMX1.p2	NM_013901|Slc39a1|30791|solute carrier family 39 (zinc transporter), member 1	AK146175|Slc39a1|30791|solute carrier family 39 (zinc transporter), member 1	BC005474|Slc39a1|30791|solute carrier family 39 (zinc transporter), member 1
mm9_v1_chr3_+_96361879_96362304	2.56205	HMX1.p2	AK089304|Txnip|56338|thioredoxin interacting protein	AK089403|Txnip|56338|thioredoxin interacting protein	NM_001009935|Txnip|56338|thioredoxin interacting protein	NM_023719|Txnip|56338|thioredoxin interacting protein	AK004653|Txnip|56338|thioredoxin interacting protein	AK082476|Txnip|56338|thioredoxin interacting protein	AK088870|Txnip|56338|thioredoxin interacting protein	AK089351|Txnip|56338|thioredoxin interacting protein	AK155517|Txnip|56338|thioredoxin interacting protein	AK171205|Txnip|56338|thioredoxin interacting protein	AK171312|Txnip|56338|thioredoxin interacting protein	AK171425|Txnip|56338|thioredoxin interacting protein	AK171456|Txnip|56338|thioredoxin interacting protein	AK171464|Txnip|56338|thioredoxin interacting protein	AK171527|Txnip|56338|thioredoxin interacting protein	BC031850|Txnip|56338|thioredoxin interacting protein	BC011212|Txnip|56338|thioredoxin interacting protein	AK187108|Txnip|56338|thioredoxin interacting protein	AF173681|Txnip|56338|thioredoxin interacting protein	AF282826|Txnip|56338|thioredoxin interacting protein	AK192038|Txnip|56338|thioredoxin interacting protein	AK214578|Txnip|56338|thioredoxin interacting protein
mm9_v1_chr19_-_4615460_4615508	2.54405	HMX1.p2	AK081560|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr6_-_67485779_67485792	2.54115	HMX1.p2	BC117719|Tacstd2|56753|tumor-associated calcium signal transducer 2	BC117720|Tacstd2|56753|tumor-associated calcium signal transducer 2	AK077370|Tacstd2|56753|tumor-associated calcium signal transducer 2	AK076410|Tacstd2|56753|tumor-associated calcium signal transducer 2	AK085753|Tacstd2|56753|tumor-associated calcium signal transducer 2
mm9_v1_chr2_+_119444033_119444033	2.53765	HMX1.p2	BC100392|Nusap1|108907|nucleolar and spindle associated protein 1	NM_001042652|Nusap1|108907|nucleolar and spindle associated protein 1	NM_133851|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr1_-_54983132_54983204	2.53533	HMX1.p2	AK157584|Ankrd44|329154|ankyrin repeat domain 44
mm9_v1_chr10_-_79896086_79896137	2.53322	HMX1.p2	AF352579|Tcf3|21423|transcription factor 3
mm9_v1_chr11_+_23978029_23978056	2.53321	HMX1.p2	AK166352|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_001159289|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	NM_016707|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr18_+_68092910_68092910	2.52678	HMX1.p2	AK052338|D18Ertd653e|52662|DNA segment, Chr 18, ERATO Doi 653, expressed	NM_172631|D18Ertd653e|52662|DNA segment, Chr 18, ERATO Doi 653, expressed
mm9_v1_chr10_-_53795556_53795601	2.52497	HMX1.p2	AK031038|Man1a|17155|mannosidase 1, alpha	NM_008548|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr8_+_107694536_107694875	2.52253	HMX1.p2	AK089094|Cbfb|12400|core binding factor beta	NM_001161456|Cbfb|12400|core binding factor beta	NM_001161457|Cbfb|12400|core binding factor beta	NM_001161458|Cbfb|12400|core binding factor beta	NM_022309|Cbfb|12400|core binding factor beta	D14570|Cbfb|12400|core binding factor beta	D14571|Cbfb|12400|core binding factor beta	D14572|Cbfb|12400|core binding factor beta	BC026749|Cbfb|12400|core binding factor beta	BC040752|Cbfb|12400|core binding factor beta	BC006763|Cbfb|12400|core binding factor beta	L03305|Cbfb|12400|core binding factor beta	L03306|Cbfb|12400|core binding factor beta
mm9_v1_chr1_+_154613622_154613679	2.52009	HMX1.p2	NM_026369|Arpc5|67771|actin related protein 2/3 complex, subunit 5
mm9_v1_chr4_+_133074976_133075003	2.51665	HMX1.p2	AK158383|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene
mm9_v1_chr10_-_128142007_128142106	2.49915	HMX1.p2	AJ223732|Cdk2|12566|cyclin-dependent kinase 2	U63337|Cdk2|12566|cyclin-dependent kinase 2	AK148017|Cdk2|12566|cyclin-dependent kinase 2	AK042462|Cdk2|12566|cyclin-dependent kinase 2	AK151979|Cdk2|12566|cyclin-dependent kinase 2	AK153983|Cdk2|12566|cyclin-dependent kinase 2	AK154997|Cdk2|12566|cyclin-dependent kinase 2	AK036589|Cdk2|12566|cyclin-dependent kinase 2	AK152922|Cdk2|12566|cyclin-dependent kinase 2	BC005654|Cdk2|12566|cyclin-dependent kinase 2	BC026145|Cdk2|12566|cyclin-dependent kinase 2	AK146845|Cdk2|12566|cyclin-dependent kinase 2	NM_016756|Cdk2|12566|cyclin-dependent kinase 2	NM_183417|Cdk2|12566|cyclin-dependent kinase 2
mm9_v1_chr16_-_9992625_9992625	2.48079	HMX1.p2	D10217|Grin2a|14811|glutamate receptor, ionotropic, NMDA2A (epsilon 1)	NM_008170|Grin2a|14811|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm9_v1_chr2_-_160738055_160738063	2.48001	HMX1.p2	BC054738|Emilin3|280635|elastin microfibril interfacer 3	BC057619|Emilin3|280635|elastin microfibril interfacer 3	NM_182840|Emilin3|280635|elastin microfibril interfacer 3
mm9_v1_chr10_+_116387609_116387672	2.4716	HMX1.p2	AK084517|4933412E12Rik|71086|RIKEN cDNA 4933412E12 gene	AK016788|4933412E12Rik|71086|RIKEN cDNA 4933412E12 gene
mm9_v1_chr5_+_31500917_31501010	2.46991	HMX1.p2	AK212070|Snx17|266781|sorting nexin 17	AK212764|Snx17|266781|sorting nexin 17	AK219074|Snx17|266781|sorting nexin 17	AK219703|Snx17|266781|sorting nexin 17
mm9_v1_chr13_-_104899571_104899748	2.46719	HMX1.p2	AK146364|Nln|75805|neurolysin (metallopeptidase M3 family)	BC016224|Nln|75805|neurolysin (metallopeptidase M3 family)	AK138399|Nln|75805|neurolysin (metallopeptidase M3 family)	AK170508|Nln|75805|neurolysin (metallopeptidase M3 family)	AK171432|Nln|75805|neurolysin (metallopeptidase M3 family)	AK079090|Nln|75805|neurolysin (metallopeptidase M3 family)	NM_029447|Nln|75805|neurolysin (metallopeptidase M3 family)
mm9_v1_chr5_+_141191142_141191153	2.46527	HMX1.p2	AF226663|AA881470|231841|EST AA881470
mm9_v1_chrX_+_8849858_8849881	2.44407	HMX1.p2	BC027097|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr17_+_73267643_73267665	2.43717	HMX1.p2	AK020110|Lbh|77889|limb-bud and heart	NM_029999|Lbh|77889|limb-bud and heart	AF317517|Lbh|77889|limb-bud and heart	BC026827|Lbh|77889|limb-bud and heart	BC052470|Lbh|77889|limb-bud and heart
mm9_v1_chr1_+_133424544_133424596	2.42509	HMX1.p2	AK076058|Fam72a|108900|family with sequence similarity 72, member A	AK041641|Fam72a|108900|family with sequence similarity 72, member A	NM_175382|Fam72a|108900|family with sequence similarity 72, member A	BC106123|Fam72a|108900|family with sequence similarity 72, member A	BC138225|Fam72a|108900|family with sequence similarity 72, member A	BC145667|Fam72a|108900|family with sequence similarity 72, member A
mm9_v1_chr17_-_35137799_35137902	2.42337	HMX1.p2	AK088284|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr15_-_75812322_75812428	2.4219	HMX1.p2	BC024536|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene	AK171003|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene	AK019123|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene	AK137409|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene
mm9_v1_chr2_-_26997965_26998000	2.42108	HMX1.p2	AK083284|Fam163b|109349|family with sequence similarity 163, member B	AK162827|Fam163b|109349|family with sequence similarity 163, member B	NM_175427|Fam163b|109349|family with sequence similarity 163, member B
mm9_v1_chr15_+_37162790_37162813	2.41668	HMX1.p2	AK002633|Grhl2|252973|grainyhead-like 2 (Drosophila)	NM_026496|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr5_-_124928243_124928390	2.39167	HMX1.p2	BC003324|Rilpl2|80291|Rab interacting lysosomal protein-like 2	NM_030259|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK171419|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK150252|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK150123|Rilpl2|80291|Rab interacting lysosomal protein-like 2	AK133760|Rilpl2|80291|Rab interacting lysosomal protein-like 2
mm9_v1_chr18_+_61886043_61886108	2.38073	HMX1.p2	AK005240|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	AK133612|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC038318|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene	BC047208|1500015A07Rik|68982|RIKEN cDNA 1500015A07 gene
mm9_v1_chr13_+_55313130_55313262	2.37658	HMX1.p2	BC024388|Nsd1|18193|nuclear receptor-binding SET-domain protein 1
mm9_v1_chr2_-_29108499_29108525	2.37099	HMX1.p2	AK079298|6530402F18Rik|76220|RIKEN cDNA 6530402F18 gene	BC066084|6530402F18Rik|76220|RIKEN cDNA 6530402F18 gene	AK018312|6530402F18Rik|76220|RIKEN cDNA 6530402F18 gene
mm9_v1_chr19_-_44144244_44144286	2.36543	HMX1.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr13_-_38750866_38750905	2.36254	HMX1.p2	AK009889|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	AK003335|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	AK160723|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	BC048466|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	NM_025380|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1
mm9_v1_chr6_+_123179860_123179891	2.35634	HMX1.p2	NM_001190320|Clec4n|56620|C-type lectin domain family 4, member n	NM_001190321|Clec4n|56620|C-type lectin domain family 4, member n	NM_020001|Clec4n|56620|C-type lectin domain family 4, member n	AK089166|Clec4n|56620|C-type lectin domain family 4, member n	AK131697|Clec4n|56620|C-type lectin domain family 4, member n	AK154673|Clec4n|56620|C-type lectin domain family 4, member n	AK171046|Clec4n|56620|C-type lectin domain family 4, member n	AF240357|Clec4n|56620|C-type lectin domain family 4, member n	AF240358|Clec4n|56620|C-type lectin domain family 4, member n	AF240359|Clec4n|56620|C-type lectin domain family 4, member n	BC023008|Clec4n|56620|C-type lectin domain family 4, member n
mm9_v1_chr11_+_88835235_88835270	2.35342	HMX1.p2	NM_016706|Coil|12812|coilin	AK146366|Coil|12812|coilin	AF208663|Coil|12812|coilin
mm9_v1_chr10_+_39089853_39089891	2.33803	HMX1.p2	M27266|Fyn|14360|Fyn proto-oncogene	U70324|Fyn|14360|Fyn proto-oncogene
mm9_v1_chr17_+_48439681_48439838	2.33444	HMX1.p2	AK013294|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	AK037593|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	DQ087184|Treml2|328833|triggering receptor expressed on myeloid cells-like 2
mm9_v1_chr3_+_87975676_87975677	2.32159	HMX1.p2	
mm9_v1_chr16_-_91647153_91647201	2.3174	HMX1.p2	AK146478|Gart|14450|phosphoribosylglycinamide formyltransferase	BC070465|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168876|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168445|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168864|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168458|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168501|Gart|14450|phosphoribosylglycinamide formyltransferase	U01023|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168724|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168796|Gart|14450|phosphoribosylglycinamide formyltransferase	AK146355|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr1_-_80755061_80755129	2.31515	HMX1.p2	AK172588|Dock10|210293|dedicator of cytokinesis 10	AK171746|Dock10|210293|dedicator of cytokinesis 10	AK042052|Dock10|210293|dedicator of cytokinesis 10	AK138722|Dock10|210293|dedicator of cytokinesis 10	NM_175291|Dock10|210293|dedicator of cytokinesis 10
mm9_v1_chr10_+_92623587_92623703	2.31404	HMX1.p2	AK078325|Cdk17|237459|cyclin-dependent kinase 17	NM_146239|Cdk17|237459|cyclin-dependent kinase 17	BC064815|Cdk17|237459|cyclin-dependent kinase 17
mm9_v1_chr18_+_89141181_89141199	2.31176	HMX1.p2	AF265232|Rttn|246102|rotatin	NM_175542|Rttn|246102|rotatin	AK083016|Rttn|246102|rotatin	AK141510|Rttn|246102|rotatin
mm9_v1_chr15_+_81575472_81575548	2.30531	HMX1.p2	AK165492|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK147978|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK147484|Zc3h7b|20286|zinc finger CCCH type containing 7B	BC059923|Zc3h7b|20286|zinc finger CCCH type containing 7B	AK171949|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr1_+_177810908_177810944	2.30391	HMX1.p2	NM_012012|Exo1|26909|exonuclease 1	AK028728|Exo1|26909|exonuclease 1	AK166425|Exo1|26909|exonuclease 1	BC006671|Exo1|26909|exonuclease 1
mm9_v1_chr3_+_127494295_127494302	2.29779	HMX1.p2	AK041891|Tifa|211550|TRAF-interacting protein with forkhead-associated domain
mm9_v1_chr4_-_46417054_46417104	2.28707	HMX1.p2	AF269248|Hemgn|93966|hemogen	NM_053149|Hemgn|93966|hemogen	AK171906|Hemgn|93966|hemogen
mm9_v1_chr8_+_90723069_90723153	2.28202	HMX1.p2	AK077553|Papd5|214627|PAP associated domain containing 5	NM_001164497|Papd5|214627|PAP associated domain containing 5	NM_001164498|Papd5|214627|PAP associated domain containing 5	NM_001164499|Papd5|214627|PAP associated domain containing 5	BC059053|Papd5|214627|PAP associated domain containing 5	BC144796|Papd5|214627|PAP associated domain containing 5	BC144797|Papd5|214627|PAP associated domain containing 5	BC145737|Papd5|214627|PAP associated domain containing 5
mm9_v1_chr11_-_51414597_51414704	2.27866	HMX1.p2	AK193201|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK196074|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK186800|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr6_-_67485802_67485823	2.27619	HMX1.p2	NM_020047|Tacstd2|56753|tumor-associated calcium signal transducer 2
mm9_v1_chr1_-_175529396_175529434	2.27294	HMX1.p2	AK143015|Pydc4|623121|pyrin domain containing 4	NM_001177349|Pydc4|623121|pyrin domain containing 4	NM_001177350|Pydc4|623121|pyrin domain containing 4
mm9_v1_chr5_-_135422730_135422775	2.2618	HMX1.p2	BC132376|Cldn4|12740|claudin 4	BC132378|Cldn4|12740|claudin 4	AB000713|Cldn4|12740|claudin 4
mm9_v1_chrX_+_8849905_8850039	2.25586	HMX1.p2	AK007734|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	NM_023500|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	AY534248|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125618|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125620|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr17_+_34729396_34729495	2.24491	HMX1.p2	AF020198|Pbx2|18515|pre B-cell leukemia transcription factor 2	NM_017463|Pbx2|18515|pre B-cell leukemia transcription factor 2	BC087615|Pbx2|18515|pre B-cell leukemia transcription factor 2	AK134357|Pbx2|18515|pre B-cell leukemia transcription factor 2
mm9_v1_chr17_-_23820984_23820992	2.24056	HMX1.p2	BC058186|Cldn9|56863|claudin 9	NM_020293|Cldn9|56863|claudin 9
mm9_v1_chr18_-_80904852_80904931	2.2385	HMX1.p2	EU887569|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887571|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887572|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AF049606|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK004810|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164111|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164112|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_016791|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr17_+_28465415_28465507	2.23697	HMX1.p2	NM_011287|Rpl10a|19896|ribosomal protein L10A
mm9_v1_chr4_-_125998912_125998946	2.23398	HMX1.p2	AK147034|Adprhl2|100206|ADP-ribosylhydrolase like 2	BC023177|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK169070|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK143583|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK171780|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK149904|Adprhl2|100206|ADP-ribosylhydrolase like 2	AK150202|Adprhl2|100206|ADP-ribosylhydrolase like 2	AJ427296|Adprhl2|100206|ADP-ribosylhydrolase like 2	NM_133883|Adprhl2|100206|ADP-ribosylhydrolase like 2
mm9_v1_chr3_-_88188354_88188385	2.23	HMX1.p2	U11542|Bglap|12096|bone gamma carboxyglutamate protein	NM_001037939|Bglap|12096|bone gamma carboxyglutamate protein	NM_007541|Bglap|12096|bone gamma carboxyglutamate protein
mm9_v1_chr10_-_43621518_43621567	2.22741	HMX1.p2	BC070459|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK012351|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	NM_001081054|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK041347|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK038801|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr6_+_97757012_97757093	2.22459	HMX1.p2	AK154189|Mitf|17342|microphthalmia-associated transcription factor	AK155350|Mitf|17342|microphthalmia-associated transcription factor	AK160757|Mitf|17342|microphthalmia-associated transcription factor	NM_001113198|Mitf|17342|microphthalmia-associated transcription factor	AB009397|Mitf|17342|microphthalmia-associated transcription factor
mm9_v1_chr11_+_32105414_32105503	2.22003	HMX1.p2	AK019452|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)	NM_030093|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)	BC028766|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)
mm9_v1_chr5_+_65194784_65194811	2.20751	HMX1.p2	BC116938|Klf3|16599|Kruppel-like factor 3 (basic)	BC119214|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr2_+_172847371_172847458	2.20056	HMX1.p2	AK166609|Rbm38|56190|RNA binding motif protein 38	NM_019547|Rbm38|56190|RNA binding motif protein 38	BC006687|Rbm38|56190|RNA binding motif protein 38	AK162141|Rbm38|56190|RNA binding motif protein 38	AK146026|Rbm38|56190|RNA binding motif protein 38	AK172625|Rbm38|56190|RNA binding motif protein 38	BC085307|Rbm38|56190|RNA binding motif protein 38
mm9_v1_chr8_+_123059756_123059756	2.19943	HMX1.p2	AK033263|Gse1|382034|genetic suppressor element 1	NM_001145897|Gse1|382034|genetic suppressor element 1
mm9_v1_chr19_+_47253626_47253646	2.19614	HMX1.p2	AK010787|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr17_-_56702631_56702768	2.19499	HMX1.p2	AK214865|Safb2|224902|scaffold attachment factor B2
mm9_v1_chr5_-_121902350_121902544	2.18999	HMX1.p2	AB009293|Erp29|67397|endoplasmic reticulum protein 29	AK154539|Erp29|67397|endoplasmic reticulum protein 29	AK165702|Erp29|67397|endoplasmic reticulum protein 29	AK004795|Erp29|67397|endoplasmic reticulum protein 29	AK009881|Erp29|67397|endoplasmic reticulum protein 29	AK168112|Erp29|67397|endoplasmic reticulum protein 29	BC017125|Erp29|67397|endoplasmic reticulum protein 29	NM_026129|Erp29|67397|endoplasmic reticulum protein 29	AK077472|Erp29|67397|endoplasmic reticulum protein 29	AK013303|Erp29|67397|endoplasmic reticulum protein 29
mm9_v1_chr19_+_9091248_9091289	2.18709	HMX1.p2	BC036151|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr7_-_53922712_53922746	2.18343	HMX1.p2	AK157858|Tph1|21990|tryptophan hydroxylase 1	J04758|Tph1|21990|tryptophan hydroxylase 1	NM_001136084|Tph1|21990|tryptophan hydroxylase 1	AF273257|Tph1|21990|tryptophan hydroxylase 1	AK146134|Tph1|21990|tryptophan hydroxylase 1	AK146171|Tph1|21990|tryptophan hydroxylase 1
mm9_v1_chr9_-_119734573_119734593	2.1813	HMX1.p2	AF118044|Scn11a|24046|sodium channel, voltage-gated, type XI, alpha	NM_011887|Scn11a|24046|sodium channel, voltage-gated, type XI, alpha
mm9_v1_chr2_-_25127860_25127956	2.16806	HMX1.p2	AK088418|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AK158412|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC037081|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC023033|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	BC048360|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AB041656|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	AK003356|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1	NM_023464|Ssna1|68475|Sjogren's syndrome nuclear autoantigen 1
mm9_v1_chr5_+_111082466_111082502	2.1648	HMX1.p2	NM_027156|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	AK141361|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	BC060646|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	AK152599|Ddx51|69663|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
mm9_v1_chr18_+_14941735_14941757	2.15344	HMX1.p2	AK012135|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_001100449|Taf4b|72504|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr6_-_87761537_87761854	2.15274	HMX1.p2	AB232640|Rab43|69834|RAB43, member RAS oncogene family	AJ534465|Rab43|69834|RAB43, member RAS oncogene family	AK010874|Rab43|69834|RAB43, member RAS oncogene family	AK158283|Rab43|69834|RAB43, member RAS oncogene family	NM_001039394|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr13_+_37437194_37437308	2.15085	HMX1.p2	AB007599|Ly86|17084|lymphocyte antigen 86	NM_010745|Ly86|17084|lymphocyte antigen 86	AK027929|Ly86|17084|lymphocyte antigen 86	BC096414|Ly86|17084|lymphocyte antigen 86	BC065783|Ly86|17084|lymphocyte antigen 86
mm9_v1_chr17_+_28465521_28465543	2.1431	HMX1.p2	AK151172|Rpl10a|19896|ribosomal protein L10A	AK150743|Rpl10a|19896|ribosomal protein L10A	AK153863|Rpl10a|19896|ribosomal protein L10A	U12403|Rpl10a|19896|ribosomal protein L10A
mm9_v1_chr1_+_140864297_140864301	2.13913	HMX1.p2	AK155727|Dennd1b|329260|DENN/MADD domain containing 1B	NM_181347|Dennd1b|329260|DENN/MADD domain containing 1B	BC141388|Dennd1b|329260|DENN/MADD domain containing 1B	BC141389|Dennd1b|329260|DENN/MADD domain containing 1B
mm9_v1_chr16_-_91647216_91647232	2.13502	HMX1.p2	NM_010256|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr19_+_21727795_21727859	2.12936	HMX1.p2	NM_146096|Fam108b|226016|family with sequence similarity 108, member B	AK017641|Fam108b|226016|family with sequence similarity 108, member B
mm9_v1_chr4_+_151382993_151383061	2.11837	HMX1.p2	AK154493|Klhl21|242785|kelch-like 21 (Drosophila)	NM_001033352|Klhl21|242785|kelch-like 21 (Drosophila)	BC060201|Klhl21|242785|kelch-like 21 (Drosophila)	AK052203|Klhl21|242785|kelch-like 21 (Drosophila)	AK158141|Klhl21|242785|kelch-like 21 (Drosophila)	BC141158|Klhl21|242785|kelch-like 21 (Drosophila)	BC141159|Klhl21|242785|kelch-like 21 (Drosophila)
mm9_v1_chr7_+_134615022_134615162	2.11195	HMX1.p2	BC055033|Prr14|233895|proline rich 14	NM_145589|Prr14|233895|proline rich 14	AK133884|Prr14|233895|proline rich 14
mm9_v1_chr4_-_109339239_109339286	2.09608	HMX1.p2	AK157209|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	AK087461|Cdkn2c|12580|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
mm9_v1_chr9_+_95855159_95855287	2.08557	HMX1.p2	AK162932|Xrn1|24127|5'-3' exoribonuclease 1	NM_011916|Xrn1|24127|5'-3' exoribonuclease 1	X91617|Xrn1|24127|5'-3' exoribonuclease 1	AK142311|Xrn1|24127|5'-3' exoribonuclease 1	AK162848|Xrn1|24127|5'-3' exoribonuclease 1	AK163245|Xrn1|24127|5'-3' exoribonuclease 1	AK143400|Xrn1|24127|5'-3' exoribonuclease 1	BC054108|Xrn1|24127|5'-3' exoribonuclease 1	BC100578|Xrn1|24127|5'-3' exoribonuclease 1	D88026|Xrn1|24127|5'-3' exoribonuclease 1
mm9_v1_chr17_-_35137690_35137738	2.08287	HMX1.p2	L78788|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5	AK088743|D17H6S56E-5|110956|DNA segment, Chr 17, human D6S56E 5
mm9_v1_chr15_-_60654198_60654219	2.08238	HMX1.p2	AK162412|Fam84b|399603|family with sequence similarity 84, member B
mm9_v1_chr5_-_135422780_135422780	2.07849	HMX1.p2	BC032172|Cldn4|12740|claudin 4
mm9_v1_chr11_+_69778907_69778927	2.07833	HMX1.p2	AK145504|Cldn7|53624|claudin 7	NM_016887|Cldn7|53624|claudin 7
mm9_v1_chr18_+_21160434_21160595	2.07469	HMX1.p2	AK136138|Rnf138|56515|ring finger protein 138	AK004238|Rnf138|56515|ring finger protein 138	AK010486|Rnf138|56515|ring finger protein 138	BC003712|Rnf138|56515|ring finger protein 138	AK013419|Rnf138|56515|ring finger protein 138
mm9_v1_chr3_+_86028611_86028623	2.07042	HMX1.p2	AF187731|Lrba|80877|LPS-responsive beige-like anchor	AF188506|Lrba|80877|LPS-responsive beige-like anchor	AF188507|Lrba|80877|LPS-responsive beige-like anchor	NM_001077687|Lrba|80877|LPS-responsive beige-like anchor	NM_001077688|Lrba|80877|LPS-responsive beige-like anchor	NM_030695|Lrba|80877|LPS-responsive beige-like anchor	AK085208|Lrba|80877|LPS-responsive beige-like anchor
mm9_v1_chr13_+_24419272_24419288	2.06739	HMX1.p2	BC028474|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AB061276|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AB061277|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	NM_001111110|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase
mm9_v1_chr1_+_175603760_175603841	2.06402	HMX1.p2	AK041099|Pydc3|100033459|pyrin domain containing 3	NM_001162938|Pydc3|100033459|pyrin domain containing 3
mm9_v1_chrX_+_7455387_7455511	2.04908	HMX1.p2	AK043570|Pim2|18715|proviral integration site 2	L41495|Pim2|18715|proviral integration site 2	NM_138606|Pim2|18715|proviral integration site 2	BC027376|Pim2|18715|proviral integration site 2
mm9_v1_chr3_-_88182614_88182620	2.04778	HMX1.p2	BC145564|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	X04142|Bglap2|12097|bone gamma-carboxyglutamate protein 2	NM_001032298|Bglap2|12097|bone gamma-carboxyglutamate protein 2
mm9_v1_chr5_-_147888037_147888155	2.04179	HMX1.p2	AK140320|Lnx2|140887|ligand of numb-protein X 2	AK170146|Lnx2|140887|ligand of numb-protein X 2	BC117938|Lnx2|140887|ligand of numb-protein X 2	BC117937|Lnx2|140887|ligand of numb-protein X 2	AF401681|Lnx2|140887|ligand of numb-protein X 2	BC090665|Lnx2|140887|ligand of numb-protein X 2	AK047053|Lnx2|140887|ligand of numb-protein X 2	AK036218|Lnx2|140887|ligand of numb-protein X 2	NM_080795|Lnx2|140887|ligand of numb-protein X 2
mm9_v1_chr4_-_118966945_118967127	2.03457	HMX1.p2	X57621|Ybx1|22608|Y box protein 1	M62867|Ybx1|22608|Y box protein 1	U33196|Ybx1|22608|Y box protein 1	BC029747|Ybx1|22608|Y box protein 1	BC013620|Ybx1|22608|Y box protein 1	M60419|Ybx1|22608|Y box protein 1	BC061634|Ybx1|22608|Y box protein 1	BC031472|Ybx1|22608|Y box protein 1	BC049977|Ybx1|22608|Y box protein 1	BC013450|Ybx1|22608|Y box protein 1	AK011890|Ybx1|22608|Y box protein 1	AK150821|Ybx1|22608|Y box protein 1	NM_011732|Ybx1|22608|Y box protein 1
mm9_v1_chr19_-_42055588_42055632	2.03266	HMX1.p2	BC018614|Mms19|72199|MMS19 (MET18 S. cerevisiae)	BC050817|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK036983|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AF319949|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK011754|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK078688|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK028317|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK030619|Mms19|72199|MMS19 (MET18 S. cerevisiae)	NM_028152|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK087633|Mms19|72199|MMS19 (MET18 S. cerevisiae)	AK010326|Mms19|72199|MMS19 (MET18 S. cerevisiae)
mm9_v1_chr3_+_105255444_105255490	2.03162	HMX1.p2	AK033962|Kcnd3|56543|potassium voltage-gated channel, Shal-related family, member 3
mm9_v1_chr7_-_30066910_30067008	2.02955	HMX1.p2	AF099016|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099019|Spint2|20733|serine protease inhibitor, Kunitz type 2	AF099020|Spint2|20733|serine protease inhibitor, Kunitz type 2	BC003431|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_001082548|Spint2|20733|serine protease inhibitor, Kunitz type 2	NM_011464|Spint2|20733|serine protease inhibitor, Kunitz type 2
mm9_v1_chr14_-_78707695_78707851	2.02799	HMX1.p2	AB008426|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	AB032771|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	AB032772|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	AB036798|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	BC125603|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	BC131970|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	AF019048|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	AF013170|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	AK159997|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	AK159498|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11	NM_011613|Tnfsf11|21943|tumor necrosis factor (ligand) superfamily, member 11
mm9_v1_chr4_-_124359695_124359773	2.01954	HMX1.p2	AK008801|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr1_+_74421706_74421882	2.01905	HMX1.p2	AK090303|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	NM_013612|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	AK171393|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	AK144237|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	AK171343|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	L13732|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	X75355|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	BC109137|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	BC109138|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
mm9_v1_chr5_-_40035831_40035890	2.01618	HMX1.p2	BC009133|Hs3st1|15476|heparan sulfate (glucosamine) 3-O-sulfotransferase 1	AK087753|Hs3st1|15476|heparan sulfate (glucosamine) 3-O-sulfotransferase 1	NM_010474|Hs3st1|15476|heparan sulfate (glucosamine) 3-O-sulfotransferase 1
mm9_v1_chr6_+_7795223_7795332	2.01295	HMX1.p2	NM_052993|C1galt1|94192|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	AF157962|C1galt1|94192|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	BC064767|C1galt1|94192|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm9_v1_chr8_-_125005680_125005754	2.01266	HMX1.p2	
mm9_v1_chr10_+_79957650_79957698	2.00994	HMX1.p2	BC058700|Onecut3|246086|one cut domain, family member 3	NM_139226|Onecut3|246086|one cut domain, family member 3	AY080897|Onecut3|246086|one cut domain, family member 3
mm9_v1_chr11_+_118884275_118884425	2.00097	HMX1.p2	X62537|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	BC035199|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	NM_007623|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	AK157869|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)	Y13274|Cbx2|12416|chromobox homolog 2 (Drosophila Pc class)
mm9_v1_chr1_-_183074270_183074295	1.99749	HMX1.p2	BC031847|Nvl|67459|nuclear VCP-like	AK013982|Nvl|67459|nuclear VCP-like	AK018049|Nvl|67459|nuclear VCP-like	NM_026171|Nvl|67459|nuclear VCP-like
mm9_v1_chr13_+_55313417_55313441	1.99339	HMX1.p2	AK135300|Nsd1|18193|nuclear receptor-binding SET-domain protein 1	AK164087|Nsd1|18193|nuclear receptor-binding SET-domain protein 1
mm9_v1_chr14_-_87540920_87540987	1.99269	HMX1.p2	AF094519|Diap3|56419|diaphanous homolog 3 (Drosophila)	NM_019670|Diap3|56419|diaphanous homolog 3 (Drosophila)	AK138694|Diap3|56419|diaphanous homolog 3 (Drosophila)	AK166225|Diap3|56419|diaphanous homolog 3 (Drosophila)	AK161737|Diap3|56419|diaphanous homolog 3 (Drosophila)	AK166882|Diap3|56419|diaphanous homolog 3 (Drosophila)	AK220493|Diap3|56419|diaphanous homolog 3 (Drosophila)	BC003250|Diap3|56419|diaphanous homolog 3 (Drosophila)
mm9_v1_chr5_+_33206352_33206425	1.99191	HMX1.p2	BC072604|Depdc5|277854|DEP domain containing 5	NM_001025426|Depdc5|277854|DEP domain containing 5	NM_001170567|Depdc5|277854|DEP domain containing 5	NM_177786|Depdc5|277854|DEP domain containing 5	AK052458|Depdc5|277854|DEP domain containing 5	AK166366|Depdc5|277854|DEP domain containing 5	AK043137|Depdc5|277854|DEP domain containing 5	AK172587|Depdc5|277854|DEP domain containing 5	AK078771|Depdc5|277854|DEP domain containing 5	AK136321|Depdc5|277854|DEP domain containing 5
mm9_v1_chr11_+_69778998_69779009	1.98709	HMX1.p2	BC110485|Cldn7|53624|claudin 7	AK002924|Cldn7|53624|claudin 7	AK010558|Cldn7|53624|claudin 7	AK167250|Cldn7|53624|claudin 7	AK087296|Cldn7|53624|claudin 7	BC050007|Cldn7|53624|claudin 7
mm9_v1_chr4_-_125879832_125879953	1.97866	HMX1.p2	AK034044|Thrap3|230753|thyroid hormone receptor associated protein 3	AK079601|Thrap3|230753|thyroid hormone receptor associated protein 3	BC026580|Thrap3|230753|thyroid hormone receptor associated protein 3	BC092239|Thrap3|230753|thyroid hormone receptor associated protein 3	AK169008|Thrap3|230753|thyroid hormone receptor associated protein 3	BC048391|Thrap3|230753|thyroid hormone receptor associated protein 3	NM_146153|Thrap3|230753|thyroid hormone receptor associated protein 3
mm9_v1_chr1_+_133807034_133807132	1.97273	HMX1.p2	NM_001145804|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	NM_175294|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049825|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK078816|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1	BC039951|Nucks1|98415|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm9_v1_chr4_-_134409199_134409236	1.97208	HMX1.p2	BC042733|Tmem57|66146|transmembrane protein 57	BC044802|Tmem57|66146|transmembrane protein 57	BC037192|Tmem57|66146|transmembrane protein 57	BC019186|Tmem57|66146|transmembrane protein 57	AK020354|Tmem57|66146|transmembrane protein 57
mm9_v1_chrX_+_50265390_50265552	1.96461	HMX1.p2	AK157045|Phf6|70998|PHD finger protein 6	AK012211|Phf6|70998|PHD finger protein 6	AK077803|Phf6|70998|PHD finger protein 6	AK163345|Phf6|70998|PHD finger protein 6	BC043127|Phf6|70998|PHD finger protein 6	NM_027642|Phf6|70998|PHD finger protein 6	AK141804|Phf6|70998|PHD finger protein 6	BC055330|Phf6|70998|PHD finger protein 6	AK122560|Phf6|70998|PHD finger protein 6	AK028498|Phf6|70998|PHD finger protein 6	AK038320|Phf6|70998|PHD finger protein 6	BC057374|Phf6|70998|PHD finger protein 6	AK192342|Phf6|70998|PHD finger protein 6	AK213676|Phf6|70998|PHD finger protein 6
mm9_v1_chr2_-_119444196_119444240	1.9645	HMX1.p2	BC115883|Oip5|70645|Opa interacting protein 5	BC116660|Oip5|70645|Opa interacting protein 5	AK017825|Oip5|70645|Opa interacting protein 5	AK045323|Oip5|70645|Opa interacting protein 5	NM_001042653|Oip5|70645|Opa interacting protein 5
mm9_v1_chrX_+_104284572_104284678	1.96213	HMX1.p2	AK038124|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK041351|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK088234|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	NM_172435|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	BC053707|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10
mm9_v1_chr1_-_75503026_75503062	1.9601	HMX1.p2	AK031074|Obsl1|98733|obscurin-like 1	NM_178884|Obsl1|98733|obscurin-like 1
mm9_v1_chr12_-_88579550_88579681	1.9567	HMX1.p2	BC125331|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene	BC125333|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene	NM_027744|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene	AK017096|4933437F05Rik|71275|RIKEN cDNA 4933437F05 gene
mm9_v1_chr5_-_128097687_128097794	1.95012	HMX1.p2	BC016233|Slc15a4|100561|solute carrier family 15, member 4	NM_133895|Slc15a4|100561|solute carrier family 15, member 4	AY050630|Slc15a4|100561|solute carrier family 15, member 4	AK048529|Slc15a4|100561|solute carrier family 15, member 4	AK154238|Slc15a4|100561|solute carrier family 15, member 4
mm9_v1_chr3_-_95622554_95622875	1.94056	HMX1.p2	AK129150|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK154692|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	BC067054|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK083674|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK087157|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK012860|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK015972|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	NM_001081293|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2
mm9_v1_chr9_+_106073255_106073259	1.93032	HMX1.p2	AK037620|Wdr82|77305|WD repeat domain containing 82	AK035109|Wdr82|77305|WD repeat domain containing 82	AK149692|Wdr82|77305|WD repeat domain containing 82	AK159240|Wdr82|77305|WD repeat domain containing 82	AK172474|Wdr82|77305|WD repeat domain containing 82	NM_029896|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr10_+_121176978_121177017	1.92721	HMX1.p2	BC065058|BC048403|270802|cDNA sequence BC048403	NM_173022|BC048403|270802|cDNA sequence BC048403	AK166238|BC048403|270802|cDNA sequence BC048403	AK138662|BC048403|270802|cDNA sequence BC048403	AK162911|BC048403|270802|cDNA sequence BC048403	AK087110|BC048403|270802|cDNA sequence BC048403	AK169891|BC048403|270802|cDNA sequence BC048403
mm9_v1_chr7_-_4741145_4741257	1.92584	HMX1.p2	AK008900|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	NM_029384|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	BC132101|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene	BC144965|2210411K11Rik|664968|RIKEN cDNA 2210411K11 gene
mm9_v1_chr10_-_128133261_128133372	1.92104	HMX1.p2	AK144551|Rab5b|19344|RAB5B, member RAS oncogene family	AK083034|Rab5b|19344|RAB5B, member RAS oncogene family	AK081251|Rab5b|19344|RAB5B, member RAS oncogene family	NM_177411|Rab5b|19344|RAB5B, member RAS oncogene family
mm9_v1_chr7_-_152125823_152125829	1.91691	HMX1.p2	EU600170|Ccnd1|12443|cyclin D1	NM_007631|Ccnd1|12443|cyclin D1
mm9_v1_chr19_-_6932673_6932702	1.91253	HMX1.p2	BC151001|Ccdc88b|78317|coiled-coil domain containing 88B	BC151009|Ccdc88b|78317|coiled-coil domain containing 88B	BC157946|Ccdc88b|78317|coiled-coil domain containing 88B	NM_001081291|Ccdc88b|78317|coiled-coil domain containing 88B
mm9_v1_chr15_-_75812714_75812714	1.91117	HMX1.p2	BC047213|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene	NM_001163518|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene	NM_146059|2410075B13Rik|223648|RIKEN cDNA 2410075B13 gene
mm9_v1_chr2_+_29921953_29922366	1.91033	HMX1.p2	AK019960|Set|56086|SET nuclear oncogene	AB015613|Set|56086|SET nuclear oncogene
mm9_v1_chr9_+_106073265_106073336	1.8994	HMX1.p2	BC094419|Wdr82|77305|WD repeat domain containing 82	BC157945|Wdr82|77305|WD repeat domain containing 82	BC158054|Wdr82|77305|WD repeat domain containing 82	BC157943|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr7_+_26449356_26449419	1.89257	HMX1.p2	AK189469|Exosc5|27998|exosome component 5
mm9_v1_chr2_-_44782719_44782794	1.89226	HMX1.p2	AK028468|Gtdc1|227835|glycosyltransferase-like domain containing 1	AK163943|Gtdc1|227835|glycosyltransferase-like domain containing 1
mm9_v1_chr2_+_129949020_129949033	1.89111	HMX1.p2	AK037229|Tgm6|241636|transglutaminase 6	AY159126|Tgm6|241636|transglutaminase 6	AY177606|Tgm6|241636|transglutaminase 6	NM_177726|Tgm6|241636|transglutaminase 6	BC112420|Tgm6|241636|transglutaminase 6	BC113796|Tgm6|241636|transglutaminase 6
mm9_v1_chr8_+_74135114_74135308	1.89074	HMX1.p2	BC018287|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr2_-_155555105_155555210	1.89065	HMX1.p2	AK075650|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	BC008268|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK149892|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK040560|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK079296|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK166998|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK080636|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK029164|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	AK155024|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2	NM_145537|Edem2|108687|ER degradation enhancer, mannosidase alpha-like 2
mm9_v1_chr19_+_47165231_47165268	1.88078	HMX1.p2	AK030496|Pdcd11|18572|programmed cell death 11	AK141450|Pdcd11|18572|programmed cell death 11	NM_011053|Pdcd11|18572|programmed cell death 11	AK129080|Pdcd11|18572|programmed cell death 11	AK161803|Pdcd11|18572|programmed cell death 11	BC070468|Pdcd11|18572|programmed cell death 11
mm9_v1_chr19_-_44144175_44144240	1.87953	HMX1.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr3_-_88351996_88352227	1.87435	HMX1.p2	AB232620|Rab25|53868|RAB25, member RAS oncogene family	AF119675|Rab25|53868|RAB25, member RAS oncogene family	BC006624|Rab25|53868|RAB25, member RAS oncogene family	AK003260|Rab25|53868|RAB25, member RAS oncogene family	NM_016899|Rab25|53868|RAB25, member RAS oncogene family
mm9_v1_chr8_+_74134884_74135109	1.87358	HMX1.p2	BC032165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK036165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	NM_146211|Glt25d1|234407|glycosyltransferase 25 domain containing 1	BC056951|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK035788|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK076103|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK029433|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK154775|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr4_-_6381171_6381368	1.87141	HMX1.p2	AK134518|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC145961|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC145963|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK147709|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr17_-_50329593_50329893	1.87044	HMX1.p2	AK087803|Rftn1|76438|raftlin lipid raft linker 1	AK152130|Rftn1|76438|raftlin lipid raft linker 1	AK153288|Rftn1|76438|raftlin lipid raft linker 1	AK172884|Rftn1|76438|raftlin lipid raft linker 1	AK155870|Rftn1|76438|raftlin lipid raft linker 1	AK170913|Rftn1|76438|raftlin lipid raft linker 1	BC052074|Rftn1|76438|raftlin lipid raft linker 1	NM_181397|Rftn1|76438|raftlin lipid raft linker 1
mm9_v1_chr11_-_118947424_118947559	1.86755	HMX1.p2	BC117801|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC117802|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	U63387|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC045162|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	BC018304|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)	NM_007625|Cbx4|12418|chromobox homolog 4 (Drosophila Pc class)
mm9_v1_chr13_-_12742377_12742693	1.86468	HMX1.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK170650|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	BC093499|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AF154337|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK009736|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK170103|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK087190|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK171335|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene	AK010724|Gpr137b-ps|664862|G protein-coupled receptor 137B, pseudogene
mm9_v1_chr2_+_72314235_72314311	1.86464	HMX1.p2	AK028671|Cdca7|66953|cell division cycle associated 7	BC066169|Cdca7|66953|cell division cycle associated 7	AK011289|Cdca7|66953|cell division cycle associated 7	AK167734|Cdca7|66953|cell division cycle associated 7	NM_025866|Cdca7|66953|cell division cycle associated 7	AK153943|Cdca7|66953|cell division cycle associated 7	AK075882|Cdca7|66953|cell division cycle associated 7
mm9_v1_chr9_-_21116703_21116742	1.86462	HMX1.p2	BC003704|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK160161|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chr8_+_109960256_109960322	1.86144	HMX1.p2	AK004962|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2	AK141281|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2	BC048184|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2	NM_025830|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2	AK146306|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2	AK151548|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2	BC039921|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2	AK088936|Wwp2|66894|WW domain containing E3 ubiquitin protein ligase 2
mm9_v1_chr6_+_17015148_17015148	1.85897	HMX1.p2	NM_207176|Tes|21753|testis derived transcript
mm9_v1_chr10_-_23506981_23507073	1.85492	HMX1.p2	BC090257|Rps12|20042|ribosomal protein S12	BC089339|Rps12|20042|ribosomal protein S12	BC092044|Rps12|20042|ribosomal protein S12	BC002079|Rps12|20042|ribosomal protein S12	BC099377|Rps12|20042|ribosomal protein S12	BC089338|Rps12|20042|ribosomal protein S12	AK132208|Rps12|20042|ribosomal protein S12	AK166923|Rps12|20042|ribosomal protein S12	AK166992|Rps12|20042|ribosomal protein S12	BC096653|Rps12|20042|ribosomal protein S12	AK002848|Rps12|20042|ribosomal protein S12	AK008057|Rps12|20042|ribosomal protein S12	AK032757|Rps12|20042|ribosomal protein S12	AK168324|Rps12|20042|ribosomal protein S12	AK169215|Rps12|20042|ribosomal protein S12	NM_011295|Rps12|20042|ribosomal protein S12
mm9_v1_chr8_+_13405080_13405105	1.85247	HMX1.p2	BC096611|Grk1|24013|G protein-coupled receptor kinase 1	NM_011881|Grk1|24013|G protein-coupled receptor kinase 1	BC075722|Grk1|24013|G protein-coupled receptor kinase 1
mm9_v1_chr1_-_38014596_38014603	1.84973	HMX1.p2	BC119394|Lyg1|69541|lysozyme G-like 1	BC119396|Lyg1|69541|lysozyme G-like 1	AK009014|Lyg1|69541|lysozyme G-like 1	NM_027111|Lyg1|69541|lysozyme G-like 1
mm9_v1_chr11_-_100302241_100302261	1.84536	HMX1.p2	BC015307|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like
mm9_v1_chr10_-_120913138_120913382	1.84323	HMX1.p2	AK167627|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	AF332864|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	BC011511|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	NM_138956|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	BC071204|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	AK155495|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	BC055023|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3
mm9_v1_chr17_+_29497858_29498034	1.83069	HMX1.p2	AK042260|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	NM_001159538|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	NM_013710|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	AK156151|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	AF017368|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2	DQ344523|Fgd2|26382|FYVE, RhoGEF and PH domain containing 2
mm9_v1_chr4_-_134409044_134409108	1.82672	HMX1.p2	AY364165|Tmem57|66146|transmembrane protein 57	BC054355|Tmem57|66146|transmembrane protein 57	BC010714|Tmem57|66146|transmembrane protein 57
mm9_v1_chr10_-_43621485_43621487	1.8239	HMX1.p2	AK170225|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr11_+_104469313_104469402	1.82203	HMX1.p2	BC125518|Itgb3|16416|integrin beta 3	BC125520|Itgb3|16416|integrin beta 3	NM_016780|Itgb3|16416|integrin beta 3	AK157958|Itgb3|16416|integrin beta 3	AF026509|Itgb3|16416|integrin beta 3	AY541673|Itgb3|16416|integrin beta 3	U83167|Itgb3|16416|integrin beta 3
mm9_v1_chr4_+_43970559_43970608	1.81187	HMX1.p2	BC031750|Glipr2|384009|GLI pathogenesis-related 2	NM_027450|Glipr2|384009|GLI pathogenesis-related 2	AK167595|Glipr2|384009|GLI pathogenesis-related 2	AK141459|Glipr2|384009|GLI pathogenesis-related 2	AK154433|Glipr2|384009|GLI pathogenesis-related 2	AK089960|Glipr2|384009|GLI pathogenesis-related 2	AK017557|Glipr2|384009|GLI pathogenesis-related 2
mm9_v1_chr12_+_111976121_111976196	1.81152	HMX1.p2	NM_027149|Wdr20a|69641|WD repeat domain 20A
mm9_v1_chr9_-_119488133_119488133	1.81131	HMX1.p2	AK147254|Scn5a|20271|sodium channel, voltage-gated, type V, alpha	AK147517|Scn5a|20271|sodium channel, voltage-gated, type V, alpha	NM_021544|Scn5a|20271|sodium channel, voltage-gated, type V, alpha
mm9_v1_chr11_+_101286405_101286406	1.80456	HMX1.p2	AK157156|Rundc1|217201|RUN domain containing 1
mm9_v1_chr14_+_76510684_76510739	1.80444	HMX1.p2	AK032324|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	NM_013745|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AK156205|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AK009260|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	BC020364|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	BC056192|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1	AF159549|Nufip1|27275|nuclear fragile X mental retardation protein interacting protein 1
mm9_v1_chr15_+_96117952_96118007	1.80382	HMX1.p2	AK007269|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)	NM_175251|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr9_+_118387306_118387461	1.80301	HMX1.p2	NM_001164789|Eomes|13813|eomesodermin homolog (Xenopus laevis)	NM_010136|Eomes|13813|eomesodermin homolog (Xenopus laevis)	AB031037|Eomes|13813|eomesodermin homolog (Xenopus laevis)	BC094319|Eomes|13813|eomesodermin homolog (Xenopus laevis)
mm9_v1_chr13_+_35751730_35751781	1.79869	HMX1.p2	NM_009881|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081260|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081261|Cdyl|12593|chromodomain protein, Y chromosome-like	BC055103|Cdyl|12593|chromodomain protein, Y chromosome-like
mm9_v1_chr12_+_60114357_60114456	1.79735	HMX1.p2	AK005928|Sip1|66603|survival of motor neuron protein interacting protein 1	AK007515|Sip1|66603|survival of motor neuron protein interacting protein 1	NM_025656|Sip1|66603|survival of motor neuron protein interacting protein 1	AK013414|Sip1|66603|survival of motor neuron protein interacting protein 1	BC053424|Sip1|66603|survival of motor neuron protein interacting protein 1
mm9_v1_chr8_-_82235601_82235638	1.7954	HMX1.p2	AK049299|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	NM_015751|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1
mm9_v1_chr9_-_21116749_21116776	1.79448	HMX1.p2	AF067146|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK010478|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	AK082674|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_001110300|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit	NM_009678|Ap1m2|11768|adaptor protein complex AP-1, mu 2 subunit
mm9_v1_chr10_-_40602888_40602905	1.79318	HMX1.p2	AK040680|Cdc40|71713|cell division cycle 40 homolog (yeast)
mm9_v1_chr17_+_31194623_31194718	1.79229	HMX1.p2	NM_009593|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	AF323659|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	Z48745|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	U34920|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	BC119471|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1	AK037433|Abcg1|11307|ATP-binding cassette, sub-family G (WHITE), member 1
mm9_v1_chr15_+_83393975_83394050	1.78155	HMX1.p2	NM_009775|Tspo|12257|translocator protein	AK151824|Tspo|12257|translocator protein	AK153273|Tspo|12257|translocator protein	AK165822|Tspo|12257|translocator protein	AK166125|Tspo|12257|translocator protein	AK151569|Tspo|12257|translocator protein	AK156489|Tspo|12257|translocator protein	AK172384|Tspo|12257|translocator protein	AK149743|Tspo|12257|translocator protein	AK151421|Tspo|12257|translocator protein	AK152860|Tspo|12257|translocator protein	AK153159|Tspo|12257|translocator protein	AK165450|Tspo|12257|translocator protein	AK150516|Tspo|12257|translocator protein	AK152082|Tspo|12257|translocator protein	AK152827|Tspo|12257|translocator protein	BC002055|Tspo|12257|translocator protein	D21207|Tspo|12257|translocator protein
mm9_v1_chr6_-_51413182_51413233	1.77898	HMX1.p2	AK049735|Hnrnpa2b1|53379|heterogeneous nuclear ribonucleoprotein A2/B1
mm9_v1_chr6_-_126116761_126116761	1.77528	HMX1.p2	NM_001164034|Ntf3|18205|neurotrophin 3	NM_008742|Ntf3|18205|neurotrophin 3
mm9_v1_chr2_+_53051140_53051188	1.7718	HMX1.p2	AK016267|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK032740|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK052010|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK082824|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	BC019550|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK159990|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AK011070|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6	AF133913|Arl6ip6|65103|ADP-ribosylation factor-like 6 interacting protein 6
mm9_v1_chr2_-_127367120_127367202	1.7709	HMX1.p2	BC039212|Prom2|192212|prominin 2	AK137749|Prom2|192212|prominin 2	AK029851|Prom2|192212|prominin 2	NM_138750|Prom2|192212|prominin 2	NM_178047|Prom2|192212|prominin 2	AF269062|Prom2|192212|prominin 2
mm9_v1_chr7_-_30066867_30066892	1.76977	HMX1.p2	BC026419|Spint2|20733|serine protease inhibitor, Kunitz type 2
mm9_v1_chr7_-_126864266_126864324	1.76373	HMX1.p2	BC004776|Thumpd1|233802|THUMP domain containing 1	NM_145585|Thumpd1|233802|THUMP domain containing 1	AK084107|Thumpd1|233802|THUMP domain containing 1	AK152912|Thumpd1|233802|THUMP domain containing 1	AK032078|Thumpd1|233802|THUMP domain containing 1
mm9_v1_chr6_+_120616386_120616438	1.76202	HMX1.p2	AK137536|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)	NM_001128151|Cecr2|330409|cat eye syndrome chromosome region, candidate 2 homolog (human)
mm9_v1_chr7_+_129210954_129210978	1.76158	HMX1.p2	AK011862|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr2_+_129838084_129838109	1.75801	HMX1.p2	L10385|Tgm3|21818|transglutaminase 3, E polypeptide	BC129890|Tgm3|21818|transglutaminase 3, E polypeptide	BC129891|Tgm3|21818|transglutaminase 3, E polypeptide	NM_009374|Tgm3|21818|transglutaminase 3, E polypeptide
mm9_v1_chr17_+_87362612_87362644	1.74927	HMX1.p2	AB060650|Rhoq|104215|ras homolog gene family, member Q	BC048813|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr5_+_123794456_123794498	1.74372	HMX1.p2	NM_029850|Bcl7a|77045|B-cell CLL/lymphoma 7A	AK086803|Bcl7a|77045|B-cell CLL/lymphoma 7A	AK044782|Bcl7a|77045|B-cell CLL/lymphoma 7A
mm9_v1_chr18_-_61195852_61195875	1.74117	HMX1.p2	BC019986|Cdx1|12590|caudal type homeobox 1	NM_009880|Cdx1|12590|caudal type homeobox 1
mm9_v1_chrX_-_163647088_163647149	1.73763	HMX1.p2	AK010659|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK088783|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK162286|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169718|Tmsb4x|19241|thymosin, beta 4, X chromosome	AK169108|Tmsb4x|19241|thymosin, beta 4, X chromosome	NM_021278|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr17_-_56856326_56856399	1.73086	HMX1.p2	BC026472|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	NM_178926|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	AK089265|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein
mm9_v1_chr11_+_83777922_83777974	1.72977	HMX1.p2	NM_001115009|Synrg|217030|synergin, gamma	BC056370|Synrg|217030|synergin, gamma	NM_194341|Synrg|217030|synergin, gamma
mm9_v1_chr7_+_129210847_129210947	1.72676	HMX1.p2	AK017851|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr4_+_155387803_155387982	1.72596	HMX1.p2	NM_011659|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139239|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC139266|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	BC065782|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4	Z21674|Tnfrsf4|22163|tumor necrosis factor receptor superfamily, member 4
mm9_v1_chrX_-_58146562_58146604	1.72336	HMX1.p2	BC096018|Sox3|20675|SRY-box containing gene 3	BC063061|Sox3|20675|SRY-box containing gene 3	BC052024|Sox3|20675|SRY-box containing gene 3	NM_009237|Sox3|20675|SRY-box containing gene 3
mm9_v1_chr19_+_47253657_47253740	1.70824	HMX1.p2	AF400063|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr2_+_173902521_173902654	1.70583	HMX1.p2	AK078110|Stx16|228960|syntaxin 16	NM_001102423|Stx16|228960|syntaxin 16	NM_001102424|Stx16|228960|syntaxin 16	NM_001102425|Stx16|228960|syntaxin 16	NM_172675|Stx16|228960|syntaxin 16	BC094436|Stx16|228960|syntaxin 16	BC095989|Stx16|228960|syntaxin 16	BC138544|Stx16|228960|syntaxin 16
mm9_v1_chr19_-_4615180_4615322	1.70018	HMX1.p2	BC023156|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr8_+_55162885_55163132	1.70002	HMX1.p2	NM_009506|Vegfc|22341|vascular endothelial growth factor C	AK047844|Vegfc|22341|vascular endothelial growth factor C	U73620|Vegfc|22341|vascular endothelial growth factor C	BC096377|Vegfc|22341|vascular endothelial growth factor C	U58112|Vegfc|22341|vascular endothelial growth factor C	EU862554|Vegfc|22341|vascular endothelial growth factor C	EU862555|Vegfc|22341|vascular endothelial growth factor C
mm9_v1_chr7_+_129210948_129210953	1.69652	HMX1.p2	AK135258|Ubfd1|28018|ubiquitin family domain containing 1	AK140891|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr1_-_182175890_182176045	1.69115	HMX1.p2	AF038935|Psen2|19165|presenilin 2	U57324|Psen2|19165|presenilin 2	NM_011183|Psen2|19165|presenilin 2
mm9_v1_chr1_-_37973274_37973337	1.68965	HMX1.p2	BC147562|Lyg2|332427|lysozyme G-like 2	BC147567|Lyg2|332427|lysozyme G-like 2	AK132442|Lyg2|332427|lysozyme G-like 2	NM_001033427|Lyg2|332427|lysozyme G-like 2
mm9_v1_chr6_-_98877291_98877410	1.68843	HMX1.p2	
mm9_v1_chr7_+_3655602_3655652	1.68388	HMX1.p2	AK081889|Rps9|76846|ribosomal protein S9	AK151621|Rps9|76846|ribosomal protein S9	AK050591|Rps9|76846|ribosomal protein S9	AK150988|Rps9|76846|ribosomal protein S9	NM_029767|Rps9|76846|ribosomal protein S9	AK151029|Rps9|76846|ribosomal protein S9	AK150800|Rps9|76846|ribosomal protein S9	BC031746|Rps9|76846|ribosomal protein S9
mm9_v1_chr1_-_52784161_52784228	1.68037	HMX1.p2	AK035995|Mfsd6|98682|major facilitator superfamily domain containing 6	NM_133829|Mfsd6|98682|major facilitator superfamily domain containing 6	NM_178081|Mfsd6|98682|major facilitator superfamily domain containing 6	AK171946|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr7_-_147222263_147222306	1.6794	HMX1.p2	AK158060|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK033157|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK045084|Tubgcp2|74237|tubulin, gamma complex associated protein 2
mm9_v1_chr15_+_78075220_78075493	1.67448	HMX1.p2	NM_008677|Ncf4|17972|neutrophil cytosolic factor 4	AK150510|Ncf4|17972|neutrophil cytosolic factor 4	AB002665|Ncf4|17972|neutrophil cytosolic factor 4	U59488|Ncf4|17972|neutrophil cytosolic factor 4	BC025517|Ncf4|17972|neutrophil cytosolic factor 4	FJ168470|Ncf4|17972|neutrophil cytosolic factor 4	AK171315|Ncf4|17972|neutrophil cytosolic factor 4
mm9_v1_chr4_+_135750199_135750281	1.66275	HMX1.p2	
mm9_v1_chr3_+_90035515_90035692	1.66247	HMX1.p2	AK146337|Jtb|23922|jumping translocation breakpoint	NM_206924|Jtb|23922|jumping translocation breakpoint	BC008139|Jtb|23922|jumping translocation breakpoint	AB016490|Jtb|23922|jumping translocation breakpoint	AK004469|Jtb|23922|jumping translocation breakpoint	AK089048|Jtb|23922|jumping translocation breakpoint
mm9_v1_chr5_-_136606906_136606948	1.66084	HMX1.p2	AK207344|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK210612|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK178976|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK187635|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1
mm9_v1_chr7_-_134169938_134169992	1.65942	HMX1.p2	L04649|Maz|17188|MYC-associated zinc finger protein (purine-binding transcription factor)	NM_010772|Maz|17188|MYC-associated zinc finger protein (purine-binding transcription factor)
mm9_v1_chr12_-_105711324_105711536	1.65938	HMX1.p2	AB221548|Gsc|14836|goosecoid homeobox	Y13150|Gsc|14836|goosecoid homeobox	NM_010351|Gsc|14836|goosecoid homeobox	Y13149|Gsc|14836|goosecoid homeobox	X99239|Gsc|14836|goosecoid homeobox
mm9_v1_chr9_+_45820921_45821106	1.65464	HMX1.p2	BC080688|Sik3|70661|SIK family kinase 3	BC063268|Sik3|70661|SIK family kinase 3
mm9_v1_chr14_-_87540995_87541041	1.65345	HMX1.p2	BC086779|Diap3|56419|diaphanous homolog 3 (Drosophila)	BC085191|Diap3|56419|diaphanous homolog 3 (Drosophila)	AK137073|Diap3|56419|diaphanous homolog 3 (Drosophila)
mm9_v1_chr2_-_164737043_164737249	1.65294	HMX1.p2	AK157577|Zfp335|329559|zinc finger protein 335	BC062921|Zfp335|329559|zinc finger protein 335	NM_199027|Zfp335|329559|zinc finger protein 335
mm9_v1_chr10_-_53795485_53795553	1.65164	HMX1.p2	AK186378|Man1a|17155|mannosidase 1, alpha	BC015265|Man1a|17155|mannosidase 1, alpha	AK028996|Man1a|17155|mannosidase 1, alpha	AK042371|Man1a|17155|mannosidase 1, alpha	AK148407|Man1a|17155|mannosidase 1, alpha	AK154820|Man1a|17155|mannosidase 1, alpha	AK171841|Man1a|17155|mannosidase 1, alpha	AK043932|Man1a|17155|mannosidase 1, alpha	AK172376|Man1a|17155|mannosidase 1, alpha	AK172667|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr12_-_112127299_112127357	1.64691	HMX1.p2	BC021867|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK004355|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK076126|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK160662|Cinp|67236|cyclin-dependent kinase 2 interacting protein	NM_026048|Cinp|67236|cyclin-dependent kinase 2 interacting protein	BC011066|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK007812|Cinp|67236|cyclin-dependent kinase 2 interacting protein	AK032155|Cinp|67236|cyclin-dependent kinase 2 interacting protein
mm9_v1_chr19_+_8894752_8894803	1.64687	HMX1.p2	AK032708|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2	DQ000354|Hnrnpul2|68693|heterogeneous nuclear ribonucleoprotein U-like 2
mm9_v1_chr4_-_6381384_6381409	1.64398	HMX1.p2	BC066075|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC082810|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK049887|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AF013632|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr5_+_65194749_65194773	1.64345	HMX1.p2	AK143838|Klf3|16599|Kruppel-like factor 3 (basic)	AK007959|Klf3|16599|Kruppel-like factor 3 (basic)	NM_008453|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr13_+_3564316_3564379	1.64295	HMX1.p2	AF095728|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr17_-_83913636_83913708	1.63734	HMX1.p2	BC004715|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	X80899|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	BC085296|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK166761|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK152553|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK167062|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK150034|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK009614|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK133520|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK159441|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	AK169619|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	NM_001159529|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like	NM_009187|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like
mm9_v1_chr17_+_36949119_36949121	1.63333	HMX1.p2	AY211083|H2-M10.6|399549|histocompatibility 2, M region locus 10.6	NM_201611|H2-M10.6|399549|histocompatibility 2, M region locus 10.6	AF539602|H2-M10.6|399549|histocompatibility 2, M region locus 10.6
mm9_v1_chr12_-_85394756_85394800	1.63039	HMX1.p2	AK132490|4732463B04Rik|100038552|RIKEN cDNA 4732463B04 gene
mm9_v1_chr18_+_24364442_24364497	1.6219	HMX1.p2	AK083391|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	NM_001160404|Galnt1|14423|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm9_v1_chr6_+_95067873_95067899	1.61684	HMX1.p2	AK142080|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001008785|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8	NM_001102670|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8
mm9_v1_chr12_-_102267095_102267118	1.61505	HMX1.p2	AK137260|Ccdc88c|68339|coiled-coil domain containing 88C	AK002458|Ccdc88c|68339|coiled-coil domain containing 88C
mm9_v1_chr4_-_22415444_22415519	1.61203	HMX1.p2	X66602|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr19_+_10651924_10651980	1.60829	HMX1.p2	AK169729|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK172638|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK040692|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK160179|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK168841|Cybasc3|225912|cytochrome b, ascorbate dependent 3	AK170911|Cybasc3|225912|cytochrome b, ascorbate dependent 3
mm9_v1_chr4_+_133074949_133074970	1.60401	HMX1.p2	BC006890|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene
mm9_v1_chr19_-_43749304_43749360	1.60013	HMX1.p2	AK155044|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr6_-_120866775_120866878	1.59909	HMX1.p2	AK077657|Bid|12122|BH3 interacting domain death agonist	BC002031|Bid|12122|BH3 interacting domain death agonist	NM_007544|Bid|12122|BH3 interacting domain death agonist	AK052356|Bid|12122|BH3 interacting domain death agonist	AK045731|Bid|12122|BH3 interacting domain death agonist	AK051076|Bid|12122|BH3 interacting domain death agonist	AK161235|Bid|12122|BH3 interacting domain death agonist
mm9_v1_chr15_+_101904203_101904238	1.59884	HMX1.p2	NM_145625|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr6_+_28373521_28373688	1.59731	HMX1.p2	BC132452|Arf5|11844|ADP-ribosylation factor 5	BC138756|Arf5|11844|ADP-ribosylation factor 5	D87902|Arf5|11844|ADP-ribosylation factor 5	NM_007480|Arf5|11844|ADP-ribosylation factor 5
mm9_v1_chr2_+_165420527_165420536	1.59435	HMX1.p2	AK141765|Eya2|14049|eyes absent 2 homolog (Drosophila)	AK137718|Eya2|14049|eyes absent 2 homolog (Drosophila)
mm9_v1_chr19_-_29399819_29399845	1.59344	HMX1.p2	BC028752|Insl6|27356|insulin-like 6	AK005622|Insl6|27356|insulin-like 6
mm9_v1_chr9_+_72655019_72655080	1.59254	HMX1.p2	AY630257|Prtg|235472|protogenin homolog (Gallus gallus)	DQ360114|Prtg|235472|protogenin homolog (Gallus gallus)	NM_175485|Prtg|235472|protogenin homolog (Gallus gallus)
mm9_v1_chr5_-_108561512_108561635	1.59133	HMX1.p2	AK033463|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK014065|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK140979|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK159813|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK170036|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	BC020076|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	BC132023|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	BC138226|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK151650|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK078317|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK042931|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK014490|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	NM_028876|Tmed5|73130|transmembrane emp24 protein transport domain containing 5
mm9_v1_chr13_-_13485585_13485897	1.59084	HMX1.p2	AK190995|Gpr137b|83924|G protein-coupled receptor 137B	AK194643|Gpr137b|83924|G protein-coupled receptor 137B	AK198577|Gpr137b|83924|G protein-coupled receptor 137B	AK201617|Gpr137b|83924|G protein-coupled receptor 137B	AK204136|Gpr137b|83924|G protein-coupled receptor 137B	AK204647|Gpr137b|83924|G protein-coupled receptor 137B	AK195847|Gpr137b|83924|G protein-coupled receptor 137B	AK185470|Gpr137b|83924|G protein-coupled receptor 137B	AK050369|Gpr137b|83924|G protein-coupled receptor 137B	AK080884|Gpr137b|83924|G protein-coupled receptor 137B	AK172286|Gpr137b|83924|G protein-coupled receptor 137B	AK147921|Gpr137b|83924|G protein-coupled receptor 137B	BC003212|Gpr137b|83924|G protein-coupled receptor 137B	AK128965|Gpr137b|83924|G protein-coupled receptor 137B	NM_031999|Gpr137b|83924|G protein-coupled receptor 137B
mm9_v1_chr3_-_89074399_89074491	1.58952	HMX1.p2	AK177059|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK170162|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK014305|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK079716|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK045924|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	BC014292|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	X96618|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	AK158862|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1	NM_009057|Slc50a1|19729|solute carrier family 50 (sugar transporter), member 1
mm9_v1_chr10_-_80806010_80806010	1.58461	HMX1.p2	AB074494|Gipc3|209047|GIPC PDZ domain containing family, member 3	NM_148951|Gipc3|209047|GIPC PDZ domain containing family, member 3
mm9_v1_chr19_-_9973901_9974022	1.58392	HMX1.p2	BC021761|Incenp|16319|inner centromere protein	AK034764|Incenp|16319|inner centromere protein	AK081841|Incenp|16319|inner centromere protein	BC052414|Incenp|16319|inner centromere protein	AF117610|Incenp|16319|inner centromere protein	BC037011|Incenp|16319|inner centromere protein	AK088627|Incenp|16319|inner centromere protein	NM_016692|Incenp|16319|inner centromere protein
mm9_v1_chr5_-_28793186_28793356	1.5826	HMX1.p2	EU664592|Shh|20423|sonic hedgehog	X76290|Shh|20423|sonic hedgehog
mm9_v1_chr17_-_71339826_71339901	1.58043	HMX1.p2	BC099425|Myl12b|67938|myosin, light chain 12B, regulatory	BC131925|Myl12b|67938|myosin, light chain 12B, regulatory	BC131927|Myl12b|67938|myosin, light chain 12B, regulatory	BC028878|Myl12b|67938|myosin, light chain 12B, regulatory	AK002885|Myl12b|67938|myosin, light chain 12B, regulatory	AK168316|Myl12b|67938|myosin, light chain 12B, regulatory	NM_023402|Myl12b|67938|myosin, light chain 12B, regulatory	AK146115|Myl12b|67938|myosin, light chain 12B, regulatory	AK005133|Myl12b|67938|myosin, light chain 12B, regulatory	AK160123|Myl12b|67938|myosin, light chain 12B, regulatory
mm9_v1_chr5_+_122660225_122660306	1.57722	HMX1.p2	AK186675|Hvcn1|74096|hydrogen voltage-gated channel 1	AK002854|Hvcn1|74096|hydrogen voltage-gated channel 1	NM_028752|Hvcn1|74096|hydrogen voltage-gated channel 1
mm9_v1_chr12_+_70473519_70473535	1.57429	HMX1.p2	AK006366|Arf6|11845|ADP-ribosylation factor 6
mm9_v1_chr4_-_132313025_132313152	1.57372	HMX1.p2	AK166253|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	BC009087|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	NM_133888|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B	AK154599|Smpdl3b|100340|sphingomyelin phosphodiesterase, acid-like 3B
mm9_v1_chrX_-_163647057_163647080	1.5735	HMX1.p2	BC018286|Tmsb4x|19241|thymosin, beta 4, X chromosome	X16053|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr16_-_50432421_50432504	1.57148	HMX1.p2	AK044855|Bbx|70508|bobby sox homolog (Drosophila)	BC019456|Bbx|70508|bobby sox homolog (Drosophila)	BC066821|Bbx|70508|bobby sox homolog (Drosophila)	AF276951|Bbx|70508|bobby sox homolog (Drosophila)	BC064763|Bbx|70508|bobby sox homolog (Drosophila)	BC057869|Bbx|70508|bobby sox homolog (Drosophila)	AK157813|Bbx|70508|bobby sox homolog (Drosophila)	AK049516|Bbx|70508|bobby sox homolog (Drosophila)	AF454943|Bbx|70508|bobby sox homolog (Drosophila)	AK017487|Bbx|70508|bobby sox homolog (Drosophila)	AK029747|Bbx|70508|bobby sox homolog (Drosophila)	AK167724|Bbx|70508|bobby sox homolog (Drosophila)	NM_027444|Bbx|70508|bobby sox homolog (Drosophila)
mm9_v1_chr12_-_102146390_102146407	1.57122	HMX1.p2	AK087410|Gpr68|238377|G protein-coupled receptor 68	NM_001177673|Gpr68|238377|G protein-coupled receptor 68	NM_175493|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr19_-_29399804_29399814	1.56999	HMX1.p2	AF135823|Insl6|27356|insulin-like 6	AF143807|Insl6|27356|insulin-like 6	NM_013754|Insl6|27356|insulin-like 6
mm9_v1_chr19_-_43749362_43749370	1.56752	HMX1.p2	BC025908|Slc25a28|246696|solute carrier family 25, member 28	NM_145156|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr17_-_57163687_57163784	1.56414	HMX1.p2	BC064454|Khsrp|16549|KH-type splicing regulatory protein
mm9_v1_chr11_-_98010872_98010958	1.56356	HMX1.p2	AK220232|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK161566|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK144786|Fbxl20|72194|F-box and leucine-rich repeat protein 20	NM_028149|Fbxl20|72194|F-box and leucine-rich repeat protein 20	AK012109|Fbxl20|72194|F-box and leucine-rich repeat protein 20
mm9_v1_chr10_-_40602908_40602950	1.56329	HMX1.p2	AK004569|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK135411|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC061220|Cdc40|71713|cell division cycle 40 homolog (yeast)	AK084140|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC147503|Cdc40|71713|cell division cycle 40 homolog (yeast)	BC158078|Cdc40|71713|cell division cycle 40 homolog (yeast)	NM_027879|Cdc40|71713|cell division cycle 40 homolog (yeast)
mm9_v1_chr4_-_120597563_120597650	1.56123	HMX1.p2	BC023360|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	AK014134|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_001160043|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_028457|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_95700522_95700570	1.56025	HMX1.p2	AK028397|Ing5|66262|inhibitor of growth family, member 5	NM_025454|Ing5|66262|inhibitor of growth family, member 5	AK007536|Ing5|66262|inhibitor of growth family, member 5	BC064674|Ing5|66262|inhibitor of growth family, member 5	AK009312|Ing5|66262|inhibitor of growth family, member 5	AK028010|Ing5|66262|inhibitor of growth family, member 5	AK145695|Ing5|66262|inhibitor of growth family, member 5
mm9_v1_chr11_+_70783688_70783714	1.54996	HMX1.p2	BC047996|Rpain|69723|RPA interacting protein	NM_027186|Rpain|69723|RPA interacting protein
mm9_v1_chr12_+_113858217_113858317	1.54806	HMX1.p2	AK146907|Adssl1|11565|adenylosuccinate synthetase like 1	NM_007421|Adssl1|11565|adenylosuccinate synthetase like 1	AK089520|Adssl1|11565|adenylosuccinate synthetase like 1	AK149634|Adssl1|11565|adenylosuccinate synthetase like 1	AK150874|Adssl1|11565|adenylosuccinate synthetase like 1	M74495|Adssl1|11565|adenylosuccinate synthetase like 1	BC039943|Adssl1|11565|adenylosuccinate synthetase like 1
mm9_v1_chr8_-_73316331_73316346	1.54772	HMX1.p2	NM_199308|Mast3|546071|microtubule associated serine/threonine kinase 3	AK140821|Mast3|546071|microtubule associated serine/threonine kinase 3
mm9_v1_chr17_-_17992130_17992168	1.54697	HMX1.p2	BC125424|Has1|15116|hyaluronan synthase1	BC125426|Has1|15116|hyaluronan synthase1	D82964|Has1|15116|hyaluronan synthase1	NM_008215|Has1|15116|hyaluronan synthase1	AK053726|Has1|15116|hyaluronan synthase1
mm9_v1_chr5_+_31252402_31252480	1.54532	HMX1.p2	AF189764|Abhd1|57742|abhydrolase domain containing 1	AK156413|Abhd1|57742|abhydrolase domain containing 1	AK162873|Abhd1|57742|abhydrolase domain containing 1	BC013505|Abhd1|57742|abhydrolase domain containing 1	NM_021304|Abhd1|57742|abhydrolase domain containing 1
mm9_v1_chr19_+_5637459_5637550	1.53465	HMX1.p2	AK155321|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	AK158072|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	BC094053|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)	NM_009045|Rela|19697|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm9_v1_chr9_+_107489981_107490091	1.53461	HMX1.p2	AK166130|Ifrd2|15983|interferon-related developmental regulator 2	AK007687|Ifrd2|15983|interferon-related developmental regulator 2	NM_025903|Ifrd2|15983|interferon-related developmental regulator 2	AK156625|Ifrd2|15983|interferon-related developmental regulator 2	AK165967|Ifrd2|15983|interferon-related developmental regulator 2	AK149496|Ifrd2|15983|interferon-related developmental regulator 2	AK166258|Ifrd2|15983|interferon-related developmental regulator 2
mm9_v1_chr17_-_56856195_56856299	1.5336	HMX1.p2	AK145854|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	AK078549|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	AK170944|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein
mm9_v1_chr2_-_144156799_144156826	1.52864	HMX1.p2	AK007360|Ovol2|107586|ovo-like 2 (Drosophila)
mm9_v1_chr4_+_77857988_77858006	1.5279	HMX1.p2	AK043640|B230208B08Rik|319499|RIKEN cDNA B230208B08 gene
mm9_v1_chr17_+_64950988_64951003	1.5266	HMX1.p2	NM_008549|Man2a1|17158|mannosidase 2, alpha 1	X61172|Man2a1|17158|mannosidase 2, alpha 1	BC138371|Man2a1|17158|mannosidase 2, alpha 1	BC138372|Man2a1|17158|mannosidase 2, alpha 1
mm9_v1_chr8_-_107788478_107788524	1.52513	HMX1.p2	BC132607|Tradd|71609|TNFRSF1A-associated via death domain	BC138642|Tradd|71609|TNFRSF1A-associated via death domain	AK156540|Tradd|71609|TNFRSF1A-associated via death domain	NM_001033161|Tradd|71609|TNFRSF1A-associated via death domain	AK018592|Tradd|71609|TNFRSF1A-associated via death domain
mm9_v1_chr10_-_23506850_23506973	1.52344	HMX1.p2	X15962|Rps12|20042|ribosomal protein S12
mm9_v1_chr1_-_9690289_9690338	1.52089	HMX1.p2	L35261|Mybl1|17864|myeloblastosis oncogene-like 1	NM_008651|Mybl1|17864|myeloblastosis oncogene-like 1
mm9_v1_chr15_-_59205688_59205750	1.51829	HMX1.p2	BC067035|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene	NM_153548|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene	AK128970|E430025E21Rik|223593|RIKEN cDNA E430025E21 gene
mm9_v1_chr3_+_53959956_53960294	1.51826	HMX1.p2	AK084109|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK080670|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK084139|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	NM_016984|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50921|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	U50922|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC120729|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	BC131915|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK044265|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF190646|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF011543|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AF019663|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4	AK049788|Trpc4|22066|transient receptor potential cation channel, subfamily C, member 4
mm9_v1_chr13_-_104968472_104968556	1.51713	HMX1.p2	BC021756|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK084373|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK013956|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK167749|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK012141|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK010346|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK163342|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK149832|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093759|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093760|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_025879|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene
mm9_v1_chr16_+_8830175_8830249	1.51599	HMX1.p2	AK007485|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	NM_001081400|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	BC116778|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene	BC116780|1810013L24Rik|69053|RIKEN cDNA 1810013L24 gene
mm9_v1_chr6_-_29162226_29162288	1.50998	HMX1.p2	BC053416|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1	NM_011829|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr4_+_6292817_6292904	1.50286	HMX1.p2	AK169415|Sdcbp|53378|syndecan binding protein	NM_001098227|Sdcbp|53378|syndecan binding protein	NM_016807|Sdcbp|53378|syndecan binding protein	AK033412|Sdcbp|53378|syndecan binding protein	AF003693|Sdcbp|53378|syndecan binding protein	AK150721|Sdcbp|53378|syndecan binding protein	AK152080|Sdcbp|53378|syndecan binding protein	AK159677|Sdcbp|53378|syndecan binding protein	AK150623|Sdcbp|53378|syndecan binding protein	AK152552|Sdcbp|53378|syndecan binding protein	AK153112|Sdcbp|53378|syndecan binding protein	AK169219|Sdcbp|53378|syndecan binding protein	AK045668|Sdcbp|53378|syndecan binding protein	AK168004|Sdcbp|53378|syndecan binding protein	AK028429|Sdcbp|53378|syndecan binding protein	AK146085|Sdcbp|53378|syndecan binding protein	AK150544|Sdcbp|53378|syndecan binding protein	AK150996|Sdcbp|53378|syndecan binding protein	AK151050|Sdcbp|53378|syndecan binding protein	AK152017|Sdcbp|53378|syndecan binding protein	AK152434|Sdcbp|53378|syndecan binding protein	AK153042|Sdcbp|53378|syndecan binding protein	AK159538|Sdcbp|53378|syndecan binding protein	AK169687|Sdcbp|53378|syndecan binding protein	AK171162|Sdcbp|53378|syndecan binding protein	AK150707|Sdcbp|53378|syndecan binding protein	AK152001|Sdcbp|53378|syndecan binding protein	AK152577|Sdcbp|53378|syndecan binding protein	AK152855|Sdcbp|53378|syndecan binding protein	AK152109|Sdcbp|53378|syndecan binding protein	AK150801|Sdcbp|53378|syndecan binding protein	AK014678|Sdcbp|53378|syndecan binding protein	AK150321|Sdcbp|53378|syndecan binding protein	AK150661|Sdcbp|53378|syndecan binding protein	AK150736|Sdcbp|53378|syndecan binding protein	AK159124|Sdcbp|53378|syndecan binding protein	AK165657|Sdcbp|53378|syndecan binding protein	AK167513|Sdcbp|53378|syndecan binding protein	AK168777|Sdcbp|53378|syndecan binding protein	BC019400|Sdcbp|53378|syndecan binding protein	AK150278|Sdcbp|53378|syndecan binding protein	AF077527|Sdcbp|53378|syndecan binding protein	AK159323|Sdcbp|53378|syndecan binding protein
mm9_v1_chr17_+_35031503_35031575	1.49139	HMX1.p2	BC062159|Zbtb12|193736|zinc finger and BTB domain containing 12	NM_198886|Zbtb12|193736|zinc finger and BTB domain containing 12	BC020447|Zbtb12|193736|zinc finger and BTB domain containing 12
mm9_v1_chr2_-_130455760_130455777	1.49119	HMX1.p2	AK170024|Ubox5|140629|U box domain containing 5	NM_001146084|Fastkd5|380601|FAST kinase domains 5	NM_198176|Fastkd5|380601|FAST kinase domains 5
mm9_v1_chr5_-_137510950_137511054	1.48993	HMX1.p2	AK192071|Ap1s1|11769|adaptor protein complex AP-1, sigma 1
mm9_v1_chr11_-_62462024_62462096	1.48774	HMX1.p2	BC053455|BC046404|192976|cDNA sequence BC046404	NM_198861|BC046404|192976|cDNA sequence BC046404
mm9_v1_chr11_+_70027581_70027626	1.48548	HMX1.p2	AB041591|Slc16a11|216867|solute carrier family 16 (monocarboxylic acid transporters), member 11
mm9_v1_chr8_+_83017933_83017964	1.48446	HMX1.p2	AK145998|Gypa|14934|glycophorin A	AK157851|Gypa|14934|glycophorin A	NM_010369|Gypa|14934|glycophorin A	AK162614|Gypa|14934|glycophorin A
mm9_v1_chr10_-_79565387_79565472	1.48156	HMX1.p2	BC019206|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	AK043861|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	AK155462|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	AK155674|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	BC056369|Sbno2|216161|strawberry notch homolog 2 (Drosophila)	NM_183426|Sbno2|216161|strawberry notch homolog 2 (Drosophila)
mm9_v1_chr1_+_74283144_74283225	1.48047	HMX1.p2	AK151513|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr1_+_74283113_74283139	1.48001	HMX1.p2	AK170061|Arpc2|76709|actin related protein 2/3 complex, subunit 2	NM_029711|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr11_-_97643692_97643709	1.47733	HMX1.p2	AK012694|Rpl23|65019|ribosomal protein L23	AK018730|Rpl23|65019|ribosomal protein L23	AK150671|Rpl23|65019|ribosomal protein L23	AK002579|Rpl23|65019|ribosomal protein L23	AK010680|Rpl23|65019|ribosomal protein L23
mm9_v1_chr13_-_108516475_108516490	1.47686	HMX1.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr9_+_21351307_21351499	1.47646	HMX1.p2	NM_021531|Carm1|59035|coactivator-associated arginine methyltransferase 1	NM_153141|Carm1|59035|coactivator-associated arginine methyltransferase 1	BC036974|Carm1|59035|coactivator-associated arginine methyltransferase 1	AK158242|Carm1|59035|coactivator-associated arginine methyltransferase 1	BC071267|Carm1|59035|coactivator-associated arginine methyltransferase 1	AF117887|Carm1|59035|coactivator-associated arginine methyltransferase 1	AK158757|Carm1|59035|coactivator-associated arginine methyltransferase 1
mm9_v1_chr9_-_99040505_99040647	1.47197	HMX1.p2	AK090116|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	BC039650|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	AK154106|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide	NM_029094|Pik3cb|74769|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm9_v1_chr1_-_162722913_162723068	1.46497	HMX1.p2	BC145811|Rabgap1l|29809|RAB GTPase activating protein 1-like	BC145813|Rabgap1l|29809|RAB GTPase activating protein 1-like	AF118565|Rabgap1l|29809|RAB GTPase activating protein 1-like	AK034019|Rabgap1l|29809|RAB GTPase activating protein 1-like	AK035796|Rabgap1l|29809|RAB GTPase activating protein 1-like	NM_013862|Rabgap1l|29809|RAB GTPase activating protein 1-like
mm9_v1_chr16_+_23224955_23224980	1.4641	HMX1.p2	AK084124|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr5_-_38952934_38952968	1.46207	HMX1.p2	AK004644|Wdr1|22388|WD repeat domain 1
mm9_v1_chr7_-_53971038_53971045	1.4578	HMX1.p2	BC055885|Saa3|20210|serum amyloid A 3	NM_011315|Saa3|20210|serum amyloid A 3
mm9_v1_chr7_-_34151337_34151337	1.45625	HMX1.p2	AF272844|Abpd|494519|androgen binding protein delta	NM_001009952|Abpd|494519|androgen binding protein delta
mm9_v1_chr4_+_128670474_128670574	1.45527	HMX1.p2	AK050133|Ak2|11637|adenylate kinase 2	AK167797|Ak2|11637|adenylate kinase 2	NM_001033966|Ak2|11637|adenylate kinase 2	AK168148|Ak2|11637|adenylate kinase 2	AB020202|Ak2|11637|adenylate kinase 2	AK168056|Ak2|11637|adenylate kinase 2	AK010936|Ak2|11637|adenylate kinase 2	AK010951|Ak2|11637|adenylate kinase 2	AK077519|Ak2|11637|adenylate kinase 2	BC008610|Ak2|11637|adenylate kinase 2	NM_016895|Ak2|11637|adenylate kinase 2	AK166976|Ak2|11637|adenylate kinase 2
mm9_v1_chr8_+_123061308_123061392	1.45463	HMX1.p2	NM_001145896|Gse1|382034|genetic suppressor element 1	AK154829|Gse1|382034|genetic suppressor element 1	AK042915|Gse1|382034|genetic suppressor element 1
mm9_v1_chr2_+_153171730_153171874	1.45213	HMX1.p2	AK122413|Asxl1|228790|additional sex combs like 1 (Drosophila)	NM_001039939|Asxl1|228790|additional sex combs like 1 (Drosophila)
mm9_v1_chr3_+_109143558_109143678	1.45138	HMX1.p2	AK033253|Vav3|57257|vav 3 oncogene	NM_020505|Vav3|57257|vav 3 oncogene	AK041249|Vav3|57257|vav 3 oncogene
mm9_v1_chr17_-_74715422_74715554	1.44448	HMX1.p2	AK214978|Dpy30|66310|dpy-30 homolog (C. elegans)	AK011643|Dpy30|66310|dpy-30 homolog (C. elegans)	AK003688|Dpy30|66310|dpy-30 homolog (C. elegans)	NM_001146224|Dpy30|66310|dpy-30 homolog (C. elegans)
mm9_v1_chr16_-_18248701_18248813	1.44213	HMX1.p2	AK008276|Ranbp1|19385|RAN binding protein 1	AK002989|Ranbp1|19385|RAN binding protein 1	AK151167|Ranbp1|19385|RAN binding protein 1	AK153074|Ranbp1|19385|RAN binding protein 1	AK167053|Ranbp1|19385|RAN binding protein 1	AK088781|Ranbp1|19385|RAN binding protein 1	AK166642|Ranbp1|19385|RAN binding protein 1	NM_011239|Ranbp1|19385|RAN binding protein 1	X56045|Ranbp1|19385|RAN binding protein 1	X56046|Ranbp1|19385|RAN binding protein 1	BC061140|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr4_-_129235583_129235617	1.44177	HMX1.p2	M12056|Lck|16818|lymphocyte protein tyrosine kinase	AK134013|Lck|16818|lymphocyte protein tyrosine kinase	AK088001|Lck|16818|lymphocyte protein tyrosine kinase	NM_001162432|Lck|16818|lymphocyte protein tyrosine kinase	NM_010693|Lck|16818|lymphocyte protein tyrosine kinase
mm9_v1_chr16_-_22121346_22121350	1.43735	HMX1.p2	AK170531|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr17_+_87682206_87682305	1.42621	HMX1.p2	AK040578|Ttc7|225049|tetratricopeptide repeat domain 7	NM_028639|Ttc7|225049|tetratricopeptide repeat domain 7	AK050263|Ttc7|225049|tetratricopeptide repeat domain 7	AK090252|Ttc7|225049|tetratricopeptide repeat domain 7	AK153704|Ttc7|225049|tetratricopeptide repeat domain 7	AK080284|Ttc7|225049|tetratricopeptide repeat domain 7	AK040610|Ttc7|225049|tetratricopeptide repeat domain 7	AK004107|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr11_-_100302306_100302402	1.42336	HMX1.p2	AK162770|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	AK148222|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	AK166393|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	AK082816|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	NM_001102650|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like	NM_026561|Nt5c3l|68106|5'-nucleotidase, cytosolic III-like
mm9_v1_chr1_+_123327625_123327651	1.42038	HMX1.p2	AK142302|Ccdc93|70829|coiled-coil domain containing 93	NM_001025156|Ccdc93|70829|coiled-coil domain containing 93	NM_029955|Ccdc93|70829|coiled-coil domain containing 93	AK082581|Ccdc93|70829|coiled-coil domain containing 93
mm9_v1_chr15_+_82930619_82930668	1.41763	HMX1.p2	NM_023475|Serhl|68607|serine hydrolase-like	AJ245737|Serhl|68607|serine hydrolase-like	AJ251200|Serhl|68607|serine hydrolase-like	BC064069|Serhl|68607|serine hydrolase-like
mm9_v1_chr9_-_62644026_62644272	1.41708	HMX1.p2	AK078303|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK160393|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr4_-_136512727_136512761	1.41599	HMX1.p2	NM_007939|Epha8|13842|Eph receptor A8	U72207|Epha8|13842|Eph receptor A8
mm9_v1_chr15_-_37162895_37162925	1.41423	HMX1.p2	AK005410|Gm16136|100379659|predicted gene 16136
mm9_v1_chr11_+_101286385_101286400	1.41095	HMX1.p2	AK086362|Rundc1|217201|RUN domain containing 1	BC119592|Rundc1|217201|RUN domain containing 1	BC119593|Rundc1|217201|RUN domain containing 1	NM_172566|Rundc1|217201|RUN domain containing 1
mm9_v1_chr5_+_138082700_138082700	1.40977	HMX1.p2	AM275337|Sap25|751865|sin3 associated polypeptide	NM_001081962|Sap25|751865|sin3 associated polypeptide
mm9_v1_chr6_+_114081375_114081412	1.40901	HMX1.p2	AK053261|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	AK021402|Slc6a11|243616|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
mm9_v1_chr8_-_124999921_124999977	1.40406	HMX1.p2	AK079883|Rnf166|68718|ring finger protein 166	BC131924|Rnf166|68718|ring finger protein 166	BC132281|Rnf166|68718|ring finger protein 166	AK151813|Rnf166|68718|ring finger protein 166	NM_001033142|Rnf166|68718|ring finger protein 166
mm9_v1_chr11_-_29447830_29448039	1.40305	HMX1.p2	BC002108|Rps27a|78294|ribosomal protein S27A	AK018706|Rps27a|78294|ribosomal protein S27A	NM_001033865|Rps27a|78294|ribosomal protein S27A	NM_024277|Rps27a|78294|ribosomal protein S27A
mm9_v1_chrX_-_20508584_20508688	1.40199	HMX1.p2	AK152782|Cfp|18636|complement factor properdin	AK159609|Cfp|18636|complement factor properdin	AK159853|Cfp|18636|complement factor properdin	AK150212|Cfp|18636|complement factor properdin	AK171374|Cfp|18636|complement factor properdin	BC132369|Cfp|18636|complement factor properdin	BC138306|Cfp|18636|complement factor properdin	AK154306|Cfp|18636|complement factor properdin	AK159291|Cfp|18636|complement factor properdin	NM_008823|Cfp|18636|complement factor properdin
mm9_v1_chr11_-_105042428_105042746	1.39977	HMX1.p2	BC099431|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene	AK156756|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene	AK148336|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene	AK006771|1700052K11Rik|73431|RIKEN cDNA 1700052K11 gene
mm9_v1_chr1_-_158649020_158649095	1.39301	HMX1.p2	AK132149|Fam20b|215015|family with sequence similarity 20, member B	NM_145413|Fam20b|215015|family with sequence similarity 20, member B	AK034081|Fam20b|215015|family with sequence similarity 20, member B	BC019381|Fam20b|215015|family with sequence similarity 20, member B
mm9_v1_chr17_-_24210437_24210453	1.38988	HMX1.p2	AK052960|Kctd5|69259|potassium channel tetramerisation domain containing 5	NM_027008|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chr5_+_124933122_124933232	1.385	HMX1.p2	AK039064|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC043031|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC058361|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	NM_029532|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	AK018232|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)
mm9_v1_chr4_+_124334876_124334927	1.38178	HMX1.p2	NM_011141|Pou3f1|18991|POU domain, class 3, transcription factor 1	X54628|Pou3f1|18991|POU domain, class 3, transcription factor 1	X56959|Pou3f1|18991|POU domain, class 3, transcription factor 1	X57482|Pou3f1|18991|POU domain, class 3, transcription factor 1
mm9_v1_chr5_-_141476549_141476556	1.37838	HMX1.p2	AK131134|Card11|108723|caspase recruitment domain family, member 11	NM_175362|Card11|108723|caspase recruitment domain family, member 11
mm9_v1_chr19_+_46576779_46576908	1.37186	HMX1.p2	AF281047|Trim8|93679|tripartite motif-containing 8	BC152343|Trim8|93679|tripartite motif-containing 8	BC152344|Trim8|93679|tripartite motif-containing 8	BC037065|Trim8|93679|tripartite motif-containing 8	BC060094|Trim8|93679|tripartite motif-containing 8
mm9_v1_chr4_-_48486214_48486324	1.36936	HMX1.p2	AK011904|Tex10|269536|testis expressed gene 10	BC151176|Tex10|269536|testis expressed gene 10	BC151177|Tex10|269536|testis expressed gene 10	AK132870|Tex10|269536|testis expressed gene 10	NM_172304|Tex10|269536|testis expressed gene 10	AK013375|Tex10|269536|testis expressed gene 10	AK141288|Tex10|269536|testis expressed gene 10
mm9_v1_chr8_+_49184445_49184445	1.3677	HMX1.p2	NM_001161516|Dctd|320685|dCMP deaminase
mm9_v1_chr11_-_116485513_116485568	1.36478	HMX1.p2	BC052182|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK154639|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK042365|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AK171085|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	NM_001167680|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)	AY167043|Rhbdf2|217344|rhomboid 5 homolog 2 (Drosophila)
mm9_v1_chr17_-_26232411_26232456	1.36001	HMX1.p2	AF153451|Nme4|56520|non-metastatic cells 4, protein expressed in	NM_019731|Nme4|56520|non-metastatic cells 4, protein expressed in	AK011573|Nme4|56520|non-metastatic cells 4, protein expressed in	AK017724|Nme4|56520|non-metastatic cells 4, protein expressed in	AF288690|Nme4|56520|non-metastatic cells 4, protein expressed in	BC027277|Nme4|56520|non-metastatic cells 4, protein expressed in	AK012805|Nme4|56520|non-metastatic cells 4, protein expressed in
mm9_v1_chr5_-_144288771_144288810	1.35278	HMX1.p2	X57277|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr19_-_43749067_43749205	1.35098	HMX1.p2	AF377993|Slc25a28|246696|solute carrier family 25, member 28	AF377994|Slc25a28|246696|solute carrier family 25, member 28
mm9_v1_chr2_-_39046224_39046253	1.34939	HMX1.p2	BC132485|Scai|320271|suppressor of cancer cell invasion	BC144986|Scai|320271|suppressor of cancer cell invasion	BC144987|Scai|320271|suppressor of cancer cell invasion	BC144989|Scai|320271|suppressor of cancer cell invasion	AK044772|Scai|320271|suppressor of cancer cell invasion	AK082408|Scai|320271|suppressor of cancer cell invasion	AK083280|Scai|320271|suppressor of cancer cell invasion	NM_178778|Scai|320271|suppressor of cancer cell invasion	AK163712|Scai|320271|suppressor of cancer cell invasion
mm9_v1_chr7_+_4416336_4416462	1.34828	HMX1.p2	AK009930|Eps8l1|67425|EPS8-like 1	AK019490|Eps8l1|67425|EPS8-like 1	NM_026146|Eps8l1|67425|EPS8-like 1	AK014556|Eps8l1|67425|EPS8-like 1	BC100383|Eps8l1|67425|EPS8-like 1
mm9_v1_chr15_-_85412250_85412299	1.34672	HMX1.p2	BC058398|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_009528|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr2_-_125450836_125450859	1.34519	HMX1.p2	AK041913|Cep152|99100|centrosomal protein 152	AK173060|Cep152|99100|centrosomal protein 152	NM_001081091|Cep152|99100|centrosomal protein 152
mm9_v1_chr14_-_40286109_40286196	1.34423	HMX1.p2	BC137838|Nrg3|18183|neuregulin 3	BC144964|Nrg3|18183|neuregulin 3
mm9_v1_chr3_+_95733480_95733504	1.3433	HMX1.p2	AB037685|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr13_+_91600662_91600791	1.34201	HMX1.p2	BC002176|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024186|Ssbp2|66970|single-stranded DNA binding protein 2	NM_024272|Ssbp2|66970|single-stranded DNA binding protein 2	AK133699|Ssbp2|66970|single-stranded DNA binding protein 2	AK051840|Ssbp2|66970|single-stranded DNA binding protein 2	AK010220|Ssbp2|66970|single-stranded DNA binding protein 2	AY037837|Ssbp2|66970|single-stranded DNA binding protein 2	AK005150|Ssbp2|66970|single-stranded DNA binding protein 2	AK013177|Ssbp2|66970|single-stranded DNA binding protein 2	AY167988|Ssbp2|66970|single-stranded DNA binding protein 2
mm9_v1_chr16_-_33961960_33961990	1.33942	HMX1.p2	M29395|Umps|22247|uridine monophosphate synthetase
mm9_v1_chr5_-_68238444_68238587	1.33321	HMX1.p2	BC129872|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	U75321|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK220560|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr5_+_33361571_33361768	1.3315	HMX1.p2	AK077596|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK168520|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK169035|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK166922|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK169189|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	BC008187|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	U57311|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK187348|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	AK187410|Ywhah|22629|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm9_v1_chr6_-_72383243_72383360	1.32428	HMX1.p2	AK191201|Mat2a|232087|methionine adenosyltransferase II, alpha	AK191379|Mat2a|232087|methionine adenosyltransferase II, alpha	AK192240|Mat2a|232087|methionine adenosyltransferase II, alpha	AK195580|Mat2a|232087|methionine adenosyltransferase II, alpha	AK196623|Mat2a|232087|methionine adenosyltransferase II, alpha	AK197103|Mat2a|232087|methionine adenosyltransferase II, alpha	AK200816|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203805|Mat2a|232087|methionine adenosyltransferase II, alpha	AK203913|Mat2a|232087|methionine adenosyltransferase II, alpha	AK201922|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr6_+_54276835_54277005	1.3237	HMX1.p2	AK136438|Prr15|78004|proline rich 15	BC055838|Prr15|78004|proline rich 15	AK021401|Prr15|78004|proline rich 15	AJ132433|Prr15|78004|proline rich 15	NM_030024|Prr15|78004|proline rich 15
mm9_v1_chr11_-_97643718_97643767	1.321	HMX1.p2	NM_022891|Rpl23|65019|ribosomal protein L23
mm9_v1_chr19_-_47538692_47538733	1.31951	HMX1.p2	BC118022|Sh3pxd2a|14218|SH3 and PX domains 2A
mm9_v1_chr3_-_67267727_67267751	1.31817	HMX1.p2	D88769|Lxn|17035|latexin
mm9_v1_chr3_+_16083164_16083288	1.31763	HMX1.p2	NM_001145919|Ythdf3|229096|YTH domain family 3	NM_172677|Ythdf3|229096|YTH domain family 3	BC067040|Ythdf3|229096|YTH domain family 3	AK039176|Ythdf3|229096|YTH domain family 3	AK137245|Ythdf3|229096|YTH domain family 3	BC067042|Ythdf3|229096|YTH domain family 3	AK053736|Ythdf3|229096|YTH domain family 3	BC057158|Ythdf3|229096|YTH domain family 3
mm9_v1_chr6_+_126965559_126965657	1.31532	HMX1.p2	NM_010204|Fgf6|14177|fibroblast growth factor 6	AK086530|Fgf6|14177|fibroblast growth factor 6	M92416|Fgf6|14177|fibroblast growth factor 6
mm9_v1_chr14_+_55502433_55502449	1.31511	HMX1.p2	AK013244|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr2_+_92025639_92025639	1.30832	HMX1.p2	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr9_+_44134859_44135076	1.30773	HMX1.p2	BC010474|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	NM_007875|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008246|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK008317|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	AK164129|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	X65603|Dpagt1|13478|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm9_v1_chr2_-_119096952_119096961	1.30577	HMX1.p2	BC021307|Rhov|228543|ras homolog gene family, member V	AK036775|Rhov|228543|ras homolog gene family, member V	AK037170|Rhov|228543|ras homolog gene family, member V	NM_145530|Rhov|228543|ras homolog gene family, member V
mm9_v1_chr15_+_8059306_8059370	1.30388	HMX1.p2	NM_133227|Nup155|170762|nucleoporin 155	AK044109|Nup155|170762|nucleoporin 155	AF322375|Nup155|170762|nucleoporin 155	AK045334|Nup155|170762|nucleoporin 155	AK145717|Nup155|170762|nucleoporin 155	AK086426|Nup155|170762|nucleoporin 155	AK036575|Nup155|170762|nucleoporin 155	AK129217|Nup155|170762|nucleoporin 155	BC050919|Nup155|170762|nucleoporin 155
mm9_v1_chr5_+_140019846_140019918	1.29984	HMX1.p2	AK082472|Uncx|22255|UNC homeobox	NM_013702|Uncx|22255|UNC homeobox	AF247550|Uncx|22255|UNC homeobox	Z96107|Uncx|22255|UNC homeobox	BC051973|Uncx|22255|UNC homeobox	AJ001116|Uncx|22255|UNC homeobox	S83543|Uncx|22255|UNC homeobox
mm9_v1_chr1_-_14745828_14746072	1.29935	HMX1.p2	AB221639|Msc|17681|musculin	AF108216|Msc|17681|musculin	BC103594|Msc|17681|musculin	BC103592|Msc|17681|musculin	BC103593|Msc|17681|musculin	BC103623|Msc|17681|musculin	AF087035|Msc|17681|musculin	NM_010827|Msc|17681|musculin	AK138917|Msc|17681|musculin
mm9_v1_chr4_-_126114651_126114748	1.29751	HMX1.p2	AK141219|Eif2c1|236511|eukaryotic translation initiation factor 2C, 1
mm9_v1_chr4_-_118966829_118966902	1.29629	HMX1.p2	AK188049|Ybx1|22608|Y box protein 1	AF038994|Ybx1|22608|Y box protein 1
mm9_v1_chr1_-_182627107_182627164	1.29078	HMX1.p2	AF201959|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AF135063|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AB221547|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	AF154573|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	BC099876|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	BC099877|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)	NM_013729|Mixl1|27217|Mix1 homeobox-like 1 (Xenopus laevis)
mm9_v1_chr2_-_167515255_167515321	1.28864	HMX1.p2	AK080983|Tmem189|407243|transmembrane protein 189
mm9_v1_chr7_+_86059105_86059120	1.28804	HMX1.p2	AK008139|Isg20|57444|interferon-stimulated protein	AK008171|Isg20|57444|interferon-stimulated protein	AK008353|Isg20|57444|interferon-stimulated protein	NM_001113527|Isg20|57444|interferon-stimulated protein
mm9_v1_chr2_-_62249934_62250287	1.2864	HMX1.p2	X58384|Dpp4|13482|dipeptidylpeptidase 4	AK040409|Dpp4|13482|dipeptidylpeptidase 4	BC022183|Dpp4|13482|dipeptidylpeptidase 4	AK163085|Dpp4|13482|dipeptidylpeptidase 4	NM_001159543|Dpp4|13482|dipeptidylpeptidase 4	NM_010074|Dpp4|13482|dipeptidylpeptidase 4
mm9_v1_chr7_-_147174332_147174467	1.28391	HMX1.p2	AK134118|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK151535|Adam8|11501|a disintegrin and metallopeptidase domain 8
mm9_v1_chr7_+_133416177_133416391	1.28064	HMX1.p2	BC025837|Sbk1|104175|SH3-binding kinase 1	BC024114|Sbk1|104175|SH3-binding kinase 1
mm9_v1_chr14_+_55502291_55502313	1.28048	HMX1.p2	AK015644|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr17_+_31433694_31433709	1.27769	HMX1.p2	AK033656|Slc37a1|224674|solute carrier family 37 (glycerol-3-phosphate transporter), member 1
mm9_v1_chr17_+_57201623_57201743	1.27747	HMX1.p2	AK077528|Crb3|224912|crumbs homolog 3 (Drosophila)	AK167279|Crb3|224912|crumbs homolog 3 (Drosophila)	BC024462|Crb3|224912|crumbs homolog 3 (Drosophila)	NM_177638|Crb3|224912|crumbs homolog 3 (Drosophila)
mm9_v1_chr13_-_38620307_38620383	1.2749	HMX1.p2	AK224952|Txndc5|105245|thioredoxin domain containing 5	AK224967|Txndc5|105245|thioredoxin domain containing 5	AY243534|Txndc5|105245|thioredoxin domain containing 5	AK169680|Txndc5|105245|thioredoxin domain containing 5	AK224923|Txndc5|105245|thioredoxin domain containing 5	AK225005|Txndc5|105245|thioredoxin domain containing 5	AK225014|Txndc5|105245|thioredoxin domain containing 5	BC016252|Txndc5|105245|thioredoxin domain containing 5	AK224999|Txndc5|105245|thioredoxin domain containing 5	AK224976|Txndc5|105245|thioredoxin domain containing 5	AK224965|Txndc5|105245|thioredoxin domain containing 5	AK224966|Txndc5|105245|thioredoxin domain containing 5	AK224979|Txndc5|105245|thioredoxin domain containing 5	AK224988|Txndc5|105245|thioredoxin domain containing 5	AK224947|Txndc5|105245|thioredoxin domain containing 5	AK224924|Txndc5|105245|thioredoxin domain containing 5	NM_145367|Txndc5|105245|thioredoxin domain containing 5	AK224939|Txndc5|105245|thioredoxin domain containing 5	AK224991|Txndc5|105245|thioredoxin domain containing 5	AK224992|Txndc5|105245|thioredoxin domain containing 5	AK224993|Txndc5|105245|thioredoxin domain containing 5	AK150781|Txndc5|105245|thioredoxin domain containing 5	AK224978|Txndc5|105245|thioredoxin domain containing 5	AK224938|Txndc5|105245|thioredoxin domain containing 5	AK224945|Txndc5|105245|thioredoxin domain containing 5	AK224977|Txndc5|105245|thioredoxin domain containing 5	AK224983|Txndc5|105245|thioredoxin domain containing 5	AK224990|Txndc5|105245|thioredoxin domain containing 5	AK142049|Txndc5|105245|thioredoxin domain containing 5	AK224946|Txndc5|105245|thioredoxin domain containing 5	AK224913|Txndc5|105245|thioredoxin domain containing 5	AK224972|Txndc5|105245|thioredoxin domain containing 5	AK224937|Txndc5|105245|thioredoxin domain containing 5	AK224989|Txndc5|105245|thioredoxin domain containing 5	AK224994|Txndc5|105245|thioredoxin domain containing 5	AK225004|Txndc5|105245|thioredoxin domain containing 5	AK225007|Txndc5|105245|thioredoxin domain containing 5	AK225010|Txndc5|105245|thioredoxin domain containing 5	AK225011|Txndc5|105245|thioredoxin domain containing 5	AK224934|Txndc5|105245|thioredoxin domain containing 5	AK224936|Txndc5|105245|thioredoxin domain containing 5	AK224951|Txndc5|105245|thioredoxin domain containing 5	AK224960|Txndc5|105245|thioredoxin domain containing 5	AK224982|Txndc5|105245|thioredoxin domain containing 5	AK225001|Txndc5|105245|thioredoxin domain containing 5	AK224927|Txndc5|105245|thioredoxin domain containing 5	AK224963|Txndc5|105245|thioredoxin domain containing 5	AK224964|Txndc5|105245|thioredoxin domain containing 5	AK224971|Txndc5|105245|thioredoxin domain containing 5	AK224986|Txndc5|105245|thioredoxin domain containing 5	AK225023|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr17_-_71351465_71351521	1.27411	HMX1.p2	BC089050|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	BC029180|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	AK028020|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene
mm9_v1_chr19_+_5447546_5447754	1.27142	HMX1.p2	AK144785|Fosl1|14283|fos-like antigen 1	NM_010235|Fosl1|14283|fos-like antigen 1	AK144839|Fosl1|14283|fos-like antigen 1	AK145035|Fosl1|14283|fos-like antigen 1	BC052917|Fosl1|14283|fos-like antigen 1	U34245|Fosl1|14283|fos-like antigen 1
mm9_v1_chr8_+_54597026_54597158	1.2713	HMX1.p2	NM_001005847|Aga|11593|aspartylglucosaminidase	BC132227|Aga|11593|aspartylglucosaminidase	BC132229|Aga|11593|aspartylglucosaminidase	BC145297|Aga|11593|aspartylglucosaminidase	S81393|Aga|11593|aspartylglucosaminidase	BC048230|Aga|11593|aspartylglucosaminidase
mm9_v1_chr12_+_32339717_32339751	1.27084	HMX1.p2	AK030656|Cog5|238123|component of oligomeric golgi complex 5	NM_001163126|Cog5|238123|component of oligomeric golgi complex 5
mm9_v1_chr15_-_75839859_75839950	1.26996	HMX1.p2	AK030392|Fam83h|105732|family with sequence similarity 83, member H	NM_001168253|Fam83h|105732|family with sequence similarity 83, member H
mm9_v1_chr1_-_173579057_173579105	1.26983	HMX1.p2	AB196816|Slamf7|75345|SLAM family member 7	AB196817|Slamf7|75345|SLAM family member 7	AB196818|Slamf7|75345|SLAM family member 7	AB196819|Slamf7|75345|SLAM family member 7	AB196837|Slamf7|75345|SLAM family member 7	AF467909|Slamf7|75345|SLAM family member 7	AF467910|Slamf7|75345|SLAM family member 7	AF467911|Slamf7|75345|SLAM family member 7	BC011154|Slamf7|75345|SLAM family member 7	AK172665|Slamf7|75345|SLAM family member 7
mm9_v1_chr17_+_31433159_31433202	1.26824	HMX1.p2	AK143636|Slc37a1|224674|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	AK153706|Slc37a1|224674|solute carrier family 37 (glycerol-3-phosphate transporter), member 1
mm9_v1_chr19_-_11893431_11893451	1.26779	HMX1.p2	AK171135|Stx3|20908|syntaxin 3
mm9_v1_chr15_+_88582086_88582189	1.26756	HMX1.p2	NM_181412|Zbed4|223773|zinc finger, BED domain containing 4	AK005794|Zbed4|223773|zinc finger, BED domain containing 4
mm9_v1_chr12_-_60305853_60305917	1.26588	HMX1.p2	BC006669|Fbxo33|70611|F-box protein 33
mm9_v1_chr10_+_79321979_79322100	1.26514	HMX1.p2	BC008531|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr8_-_82235513_82235596	1.26431	HMX1.p2	U90446|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167704|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	BC005422|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK144711|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK133748|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK134738|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK147151|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167370|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1	AK167130|Abce1|24015|ATP-binding cassette, sub-family E (OABP), member 1
mm9_v1_chr14_-_56853436_56853492	1.26339	HMX1.p2	X12822|Gzmc|14940|granzyme C	BC120755|Gzmc|14940|granzyme C	BC120757|Gzmc|14940|granzyme C	BC145030|Gzmc|14940|granzyme C	M18459|Gzmc|14940|granzyme C	NM_010371|Gzmc|14940|granzyme C
mm9_v1_chr2_-_91803660_91803893	1.26315	HMX1.p2	NM_138306|Dgkz|104418|diacylglycerol kinase zeta	BC049228|Dgkz|104418|diacylglycerol kinase zeta
mm9_v1_chr17_-_74715708_74715816	1.26141	HMX1.p2	NM_001146222|Dpy30|66310|dpy-30 homolog (C. elegans)	BC002240|Dpy30|66310|dpy-30 homolog (C. elegans)	AK013073|Dpy30|66310|dpy-30 homolog (C. elegans)	AK077902|Dpy30|66310|dpy-30 homolog (C. elegans)	NM_001146223|Dpy30|66310|dpy-30 homolog (C. elegans)
mm9_v1_chr5_+_104728299_104728323	1.25922	HMX1.p2	NM_008318|Ibsp|15891|integrin binding sialoprotein	AK132371|Ibsp|15891|integrin binding sialoprotein	L23801|Ibsp|15891|integrin binding sialoprotein	BC045143|Ibsp|15891|integrin binding sialoprotein	AK162640|Ibsp|15891|integrin binding sialoprotein	L20232|Ibsp|15891|integrin binding sialoprotein
mm9_v1_chr13_-_58486515_58486599	1.25904	HMX1.p2	AK052253|2210016F16Rik|70153|RIKEN cDNA 2210016F16 gene	NM_027335|2210016F16Rik|70153|RIKEN cDNA 2210016F16 gene
mm9_v1_chrX_-_71176073_71176206	1.2582	HMX1.p2	BC004830|Renbp|19703|renin binding protein	AK167648|Renbp|19703|renin binding protein	AK014347|Renbp|19703|renin binding protein	BC014821|Renbp|19703|renin binding protein	BC035455|Renbp|19703|renin binding protein	BC034846|Renbp|19703|renin binding protein	AK146652|Renbp|19703|renin binding protein	AY183138|Renbp|19703|renin binding protein	NM_001164704|Renbp|19703|renin binding protein	NM_023132|Renbp|19703|renin binding protein
mm9_v1_chr1_+_168060558_168060597	1.25579	HMX1.p2	AK008784|Gpa33|59290|glycoprotein A33 (transmembrane)	AF247659|Gpa33|59290|glycoprotein A33 (transmembrane)	NM_021610|Gpa33|59290|glycoprotein A33 (transmembrane)	BC008528|Gpa33|59290|glycoprotein A33 (transmembrane)
mm9_v1_chr5_+_118317127_118317127	1.25355	HMX1.p2	D14552|Nos1|18125|nitric oxide synthase 1, neuronal	NM_008712|Nos1|18125|nitric oxide synthase 1, neuronal
mm9_v1_chr9_-_100446444_100446539	1.2529	HMX1.p2	BC002015|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	NM_010878|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK051854|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr17_+_48439264_48439362	1.25287	HMX1.p2	DQ341272|Treml2|328833|triggering receptor expressed on myeloid cells-like 2	NM_001033405|Treml2|328833|triggering receptor expressed on myeloid cells-like 2
mm9_v1_chr6_+_95067923_95067958	1.24966	HMX1.p2	AK167507|Kbtbd8|243574|kelch repeat and BTB (POZ) domain containing 8
mm9_v1_chr5_+_117583596_117583674	1.24926	HMX1.p2	AK155208|Taok3|330177|TAO kinase 3	NM_001081308|Taok3|330177|TAO kinase 3	AK171353|Taok3|330177|TAO kinase 3	AK037817|Taok3|330177|TAO kinase 3	AK042181|Taok3|330177|TAO kinase 3
mm9_v1_chr18_+_67624537_67624590	1.24831	HMX1.p2	AK044163|Slmo1|225655|slowmo homolog 1 (Drosophila)	AK038905|Slmo1|225655|slowmo homolog 1 (Drosophila)	BC019561|Slmo1|225655|slowmo homolog 1 (Drosophila)
mm9_v1_chr12_+_112951212_112951331	1.24779	HMX1.p2	AK006963|2810002N01Rik|68020|RIKEN cDNA 2810002N01 gene
mm9_v1_chrX_+_71528035_71528145	1.24128	HMX1.p2	NM_001173547|Taz|66826|tafazzin	NM_181516|Taz|66826|tafazzin	AK172563|Taz|66826|tafazzin	AK019872|Taz|66826|tafazzin	AK076481|Taz|66826|tafazzin	AK160327|Taz|66826|tafazzin	AK170662|Taz|66826|tafazzin	AK004035|Taz|66826|tafazzin	AK075615|Taz|66826|tafazzin	BC015305|Taz|66826|tafazzin
mm9_v1_chr17_+_28906259_28906317	1.24051	HMX1.p2	NM_011950|Mapk13|26415|mitogen-activated protein kinase 13	AK146993|Mapk13|26415|mitogen-activated protein kinase 13	BC001992|Mapk13|26415|mitogen-activated protein kinase 13	U81823|Mapk13|26415|mitogen-activated protein kinase 13
mm9_v1_chr7_+_13551229_13551290	1.24003	HMX1.p2	AK152696|Zfp324|243834|zinc finger protein 324
mm9_v1_chr5_+_97426665_97426877	1.23934	HMX1.p2	AY050249|Bmp2k|140780|BMP2 inducible kinase	NM_080708|Bmp2k|140780|BMP2 inducible kinase	AK046752|Bmp2k|140780|BMP2 inducible kinase
mm9_v1_chr7_+_149135837_149135911	1.23811	HMX1.p2	AK158574|Brsk2|75770|BR serine/threonine kinase 2
mm9_v1_chr11_-_98950601_98950619	1.23725	HMX1.p2	BC055820|Tns4|217169|tensin 4	AK036834|Tns4|217169|tensin 4	NM_172564|Tns4|217169|tensin 4
mm9_v1_chr3_-_67267776_67267862	1.23605	HMX1.p2	AK149981|Lxn|17035|latexin	BC115521|Lxn|17035|latexin	BC115522|Lxn|17035|latexin	AK032170|Lxn|17035|latexin	NM_016753|Lxn|17035|latexin
mm9_v1_chr15_+_101904294_101904371	1.23341	HMX1.p2	BC147746|Eif4b|75705|eukaryotic translation initiation factor 4B	BC147748|Eif4b|75705|eukaryotic translation initiation factor 4B	AK077423|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170256|Eif4b|75705|eukaryotic translation initiation factor 4B	AK148012|Eif4b|75705|eukaryotic translation initiation factor 4B	AK163266|Eif4b|75705|eukaryotic translation initiation factor 4B	AK166363|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168425|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168350|Eif4b|75705|eukaryotic translation initiation factor 4B	AK045250|Eif4b|75705|eukaryotic translation initiation factor 4B	BC036293|Eif4b|75705|eukaryotic translation initiation factor 4B	AK161693|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170354|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr2_+_164659268_164659347	1.23253	HMX1.p2	AK159150|Ctsa|19025|cathepsin A	AK032197|Ctsa|19025|cathepsin A	AK159766|Ctsa|19025|cathepsin A	BC018534|Ctsa|19025|cathepsin A
mm9_v1_chr7_-_31861665_31861715	1.23187	HMX1.p2	BC002039|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	BC051033|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	BC056223|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	AK145206|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	AK166426|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	X93038|Fxyd3|17178|FXYD domain-containing ion transport regulator 3	NM_008557|Fxyd3|17178|FXYD domain-containing ion transport regulator 3
mm9_v1_chr11_-_78564918_78565234	1.23041	HMX1.p2	AY445047|Fam58b|69109|family with sequence similarity 58, member B	AK007413|Fam58b|69109|family with sequence similarity 58, member B	AK032408|Fam58b|69109|family with sequence similarity 58, member B	BC027022|Fam58b|69109|family with sequence similarity 58, member B	NM_197989|Fam58b|69109|family with sequence similarity 58, member B
mm9_v1_chr19_-_12870612_12870615	1.22363	HMX1.p2	NM_053009|Zfp91|109910|zinc finger protein 91	AK147560|Zfp91|109910|zinc finger protein 91
mm9_v1_chr12_+_111976211_111976241	1.22168	HMX1.p2	AK052481|Wdr20a|69641|WD repeat domain 20A	BC026761|Wdr20a|69641|WD repeat domain 20A	BC027497|Wdr20a|69641|WD repeat domain 20A	AK145389|Wdr20a|69641|WD repeat domain 20A
mm9_v1_chr9_+_107490100_107490219	1.21784	HMX1.p2	BC023486|Ifrd2|15983|interferon-related developmental regulator 2	BC037434|Ifrd2|15983|interferon-related developmental regulator 2	AY298860|Ifrd2|15983|interferon-related developmental regulator 2
mm9_v1_chr17_+_47730384_47730630	1.21765	HMX1.p2	AK165191|Ccnd3|12445|cyclin D3	NM_007632|Ccnd3|12445|cyclin D3	AK159503|Ccnd3|12445|cyclin D3	AK168290|Ccnd3|12445|cyclin D3	M86183|Ccnd3|12445|cyclin D3	BC004076|Ccnd3|12445|cyclin D3	BC005605|Ccnd3|12445|cyclin D3
mm9_v1_chr10_-_79896388_79896431	1.21665	HMX1.p2	AK170674|Tcf3|21423|transcription factor 3	NM_001164147|Tcf3|21423|transcription factor 3	NM_001164148|Tcf3|21423|transcription factor 3	NM_001164149|Tcf3|21423|transcription factor 3	NM_001164150|Tcf3|21423|transcription factor 3	NM_001164151|Tcf3|21423|transcription factor 3	NM_001164152|Tcf3|21423|transcription factor 3	NM_001164153|Tcf3|21423|transcription factor 3	NM_011548|Tcf3|21423|transcription factor 3	AK147735|Tcf3|21423|transcription factor 3
mm9_v1_chr8_+_74012592_74012671	1.21426	HMX1.p2	BC138560|Gtpbp3|70359|GTP binding protein 3	BC145333|Gtpbp3|70359|GTP binding protein 3	BC092042|Gtpbp3|70359|GTP binding protein 3	AK046330|Gtpbp3|70359|GTP binding protein 3	BC075712|Gtpbp3|70359|GTP binding protein 3	BC055716|Gtpbp3|70359|GTP binding protein 3
mm9_v1_chr2_+_90936845_90937066	1.21348	HMX1.p2	AK154945|Sfpi1|20375|SFFV proviral integration 1	AK155085|Sfpi1|20375|SFFV proviral integration 1	AK153524|Sfpi1|20375|SFFV proviral integration 1	AK142246|Sfpi1|20375|SFFV proviral integration 1	M38252|Sfpi1|20375|SFFV proviral integration 1	NM_011355|Sfpi1|20375|SFFV proviral integration 1	M32370|Sfpi1|20375|SFFV proviral integration 1	BC003815|Sfpi1|20375|SFFV proviral integration 1	L03215|Sfpi1|20375|SFFV proviral integration 1
mm9_v1_chr1_-_173987681_173987726	1.20972	HMX1.p2	M82874|Nhlh1|18071|nescient helix loop helix 1	BC051018|Nhlh1|18071|nescient helix loop helix 1	BC054760|Nhlh1|18071|nescient helix loop helix 1	AK149315|Nhlh1|18071|nescient helix loop helix 1	NM_010916|Nhlh1|18071|nescient helix loop helix 1
mm9_v1_chr5_-_68238654_68238670	1.20802	HMX1.p2	DQ503480|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK151709|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503479|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_001038999|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	NM_009727|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503477|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr15_-_79085177_79085186	1.20442	HMX1.p2	BC018216|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8	NM_020516|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8	AF019111|Slc16a8|57274|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm9_v1_chr12_+_8681486_8681486	1.20436	HMX1.p2	AF315590|Pum2|80913|pumilio 2 (Drosophila)	NM_030723|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr15_+_76181718_76181819	1.20362	HMX1.p2	NM_001164607|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_001164608|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_026859|Maf1|68877|MAF1 homolog (S. cerevisiae)	BC016260|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK154047|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK042913|Maf1|68877|MAF1 homolog (S. cerevisiae)
mm9_v1_chr1_-_88284715_88284736	1.20325	HMX1.p2	AF044602|Nmur1|14767|neuromedin U receptor 1	NM_010341|Nmur1|14767|neuromedin U receptor 1	BC120822|Nmur1|14767|neuromedin U receptor 1	BC137775|Nmur1|14767|neuromedin U receptor 1
mm9_v1_chr1_+_38054854_38055019	1.20079	HMX1.p2	AK145732|Eif5b|226982|eukaryotic translation initiation factor 5B	NM_198303|Eif5b|226982|eukaryotic translation initiation factor 5B	AK163527|Eif5b|226982|eukaryotic translation initiation factor 5B	AK145146|Eif5b|226982|eukaryotic translation initiation factor 5B	BC103806|Eif5b|226982|eukaryotic translation initiation factor 5B	AK168377|Eif5b|226982|eukaryotic translation initiation factor 5B	BC040746|Eif5b|226982|eukaryotic translation initiation factor 5B	BC018347|Eif5b|226982|eukaryotic translation initiation factor 5B	BC060288|Eif5b|226982|eukaryotic translation initiation factor 5B
mm9_v1_chr17_+_49754460_49754540	1.20075	HMX1.p2	AK083760|Kif6|319991|kinesin family member 6	NM_177052|Kif6|319991|kinesin family member 6	AK043404|Kif6|319991|kinesin family member 6
mm9_v1_chr7_-_152125661_152125812	1.19666	HMX1.p2	AK170833|Ccnd1|12443|cyclin D1	BC060172|Ccnd1|12443|cyclin D1	BC044841|Ccnd1|12443|cyclin D1	AK149905|Ccnd1|12443|cyclin D1	S78355|Ccnd1|12443|cyclin D1	AK053348|Ccnd1|12443|cyclin D1	AK164997|Ccnd1|12443|cyclin D1	M64403|Ccnd1|12443|cyclin D1	AK017834|Ccnd1|12443|cyclin D1
mm9_v1_chr7_+_31245076_31245076	1.19548	HMX1.p2	AF172256|Nphs1|54631|nephrosis 1 homolog, nephrin (human)	NM_019459|Nphs1|54631|nephrosis 1 homolog, nephrin (human)
mm9_v1_chr11_-_100956699_100956725	1.19519	HMX1.p2	FJ937967|Psmc3ip|19183|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	AB000121|Psmc3ip|19183|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	BC030169|Psmc3ip|19183|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	NM_008949|Psmc3ip|19183|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	AK133462|Psmc3ip|19183|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	FJ937966|Psmc3ip|19183|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
mm9_v1_chr6_-_127075853_127076093	1.19487	HMX1.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr6_-_72383494_72383569	1.19219	HMX1.p2	AK199984|Mat2a|232087|methionine adenosyltransferase II, alpha	AK205713|Mat2a|232087|methionine adenosyltransferase II, alpha	AK209635|Mat2a|232087|methionine adenosyltransferase II, alpha	AK215987|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr17_+_56752805_56752873	1.1905	HMX1.p2	NM_018730|Rpl36|54217|ribosomal protein L36	AK003115|Rpl36|54217|ribosomal protein L36	BC086914|Rpl36|54217|ribosomal protein L36	BC021595|Rpl36|54217|ribosomal protein L36	X75895|Rpl36|54217|ribosomal protein L36
mm9_v1_chrX_+_54307050_54307082	1.18962	HMX1.p2	AK011234|Htatsf1|72459|HIV TAT specific factor 1	AK005527|Htatsf1|72459|HIV TAT specific factor 1	AK139853|Htatsf1|72459|HIV TAT specific factor 1	AK049495|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr2_-_164016293_164016343	1.18728	HMX1.p2	BC030939|Wfdc12|192200|WAP four-disulfide core domain 12	NM_138684|Wfdc12|192200|WAP four-disulfide core domain 12	AF276975|Wfdc12|192200|WAP four-disulfide core domain 12	AK008999|Wfdc12|192200|WAP four-disulfide core domain 12
mm9_v1_chr16_+_23224889_23224926	1.18623	HMX1.p2	BC096026|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	AF153680|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr4_-_129816405_129816405	1.18459	HMX1.p2	AY336083|Hcrtr1|230777|hypocretin (orexin) receptor 1	NM_198959|Hcrtr1|230777|hypocretin (orexin) receptor 1
mm9_v1_chr15_+_79178063_79178107	1.18437	HMX1.p2	BC022952|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)	NM_010755|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr9_-_40792541_40792554	1.18426	HMX1.p2	AK163744|Crtam|54698|cytotoxic and regulatory T cell molecule
mm9_v1_chr2_+_144381976_144382053	1.18314	HMX1.p2	AK158398|Sec23b|27054|SEC23B (S. cerevisiae)	AK153214|Sec23b|27054|SEC23B (S. cerevisiae)	AK146083|Sec23b|27054|SEC23B (S. cerevisiae)	BC011160|Sec23b|27054|SEC23B (S. cerevisiae)	NM_019787|Sec23b|27054|SEC23B (S. cerevisiae)	AK014597|Sec23b|27054|SEC23B (S. cerevisiae)	AK166330|Sec23b|27054|SEC23B (S. cerevisiae)	AK155168|Sec23b|27054|SEC23B (S. cerevisiae)	AK149693|Sec23b|27054|SEC23B (S. cerevisiae)	AK167382|Sec23b|27054|SEC23B (S. cerevisiae)	AK167732|Sec23b|27054|SEC23B (S. cerevisiae)	AK171597|Sec23b|27054|SEC23B (S. cerevisiae)	BC005464|Sec23b|27054|SEC23B (S. cerevisiae)	AK139729|Sec23b|27054|SEC23B (S. cerevisiae)
mm9_v1_chr2_+_128926721_128926816	1.18152	HMX1.p2	NM_009086|Polr1b|20017|polymerase (RNA) I polypeptide B	AK156712|Polr1b|20017|polymerase (RNA) I polypeptide B	AK144616|Polr1b|20017|polymerase (RNA) I polypeptide B	AK083732|Polr1b|20017|polymerase (RNA) I polypeptide B	AK052672|Polr1b|20017|polymerase (RNA) I polypeptide B	U58280|Polr1b|20017|polymerase (RNA) I polypeptide B	AK143501|Polr1b|20017|polymerase (RNA) I polypeptide B	BC060656|Polr1b|20017|polymerase (RNA) I polypeptide B
mm9_v1_chr10_+_81106380_81106406	1.18147	HMX1.p2	AK017778|Ankrd24|70615|ankyrin repeat domain 24
mm9_v1_chr12_-_109417393_109417565	1.18143	HMX1.p2	AK166570|Setd3|52690|SET domain containing 3	BC016123|Setd3|52690|SET domain containing 3	BC019973|Setd3|52690|SET domain containing 3	AY513271|Setd3|52690|SET domain containing 3	BC057968|Setd3|52690|SET domain containing 3	AK031371|Setd3|52690|SET domain containing 3	BC108358|Setd3|52690|SET domain containing 3	AK011993|Setd3|52690|SET domain containing 3	AK029403|Setd3|52690|SET domain containing 3	AK146777|Setd3|52690|SET domain containing 3	NM_028262|Setd3|52690|SET domain containing 3	AK170917|Setd3|52690|SET domain containing 3
mm9_v1_chr3_-_138152336_138152369	1.17801	HMX1.p2	BC096469|Metap1|75624|methionyl aminopeptidase 1	AK077694|Metap1|75624|methionyl aminopeptidase 1	NM_175224|Metap1|75624|methionyl aminopeptidase 1	AK153944|Metap1|75624|methionyl aminopeptidase 1	AK165034|Metap1|75624|methionyl aminopeptidase 1	AK152138|Metap1|75624|methionyl aminopeptidase 1	AK153231|Metap1|75624|methionyl aminopeptidase 1
mm9_v1_chr9_-_90165508_90165664	1.17566	HMX1.p2	AK089175|Tbc1d2b|67016|TBC1 domain family, member 2B	AK129273|Tbc1d2b|67016|TBC1 domain family, member 2B	AK156788|Tbc1d2b|67016|TBC1 domain family, member 2B	NM_194334|Tbc1d2b|67016|TBC1 domain family, member 2B	AK148382|Tbc1d2b|67016|TBC1 domain family, member 2B
mm9_v1_chr12_+_17355232_17355314	1.17476	HMX1.p2	AK160864|Nol10|217431|nucleolar protein 10	AK166160|Nol10|217431|nucleolar protein 10	AK164400|Nol10|217431|nucleolar protein 10	AK148210|Nol10|217431|nucleolar protein 10	BC086676|Nol10|217431|nucleolar protein 10	NM_001008421|Nol10|217431|nucleolar protein 10
mm9_v1_chr1_+_9838330_9838477	1.17286	HMX1.p2	AK030314|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_001037759|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166531|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK146561|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031328|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171959|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr9_-_107996781_107996821	1.17262	HMX1.p2	BC025494|Apeh|235606|acylpeptide hydrolase	BC005716|Apeh|235606|acylpeptide hydrolase	AK041271|Apeh|235606|acylpeptide hydrolase	AK149671|Apeh|235606|acylpeptide hydrolase	AK149713|Apeh|235606|acylpeptide hydrolase	NM_146226|Apeh|235606|acylpeptide hydrolase
mm9_v1_chr17_-_47970167_47970209	1.17036	HMX1.p2	U57822|Mdfi|17240|MyoD family inhibitor	BC006018|Mdfi|17240|MyoD family inhibitor	NM_010783|Mdfi|17240|MyoD family inhibitor	U57821|Mdfi|17240|MyoD family inhibitor
mm9_v1_chr7_+_134376800_134376956	1.16947	HMX1.p2	AK148378|Zfp553|233887|zinc finger protein 553	BC026401|Zfp553|233887|zinc finger protein 553	NM_146201|Zfp553|233887|zinc finger protein 553
mm9_v1_chr16_+_10835151_10835160	1.16823	HMX1.p2	AK143588|A630055G03Rik|223970|RIKEN cDNA A630055G03 gene	NM_001162932|A630055G03Rik|223970|RIKEN cDNA A630055G03 gene	AK080331|A630055G03Rik|223970|RIKEN cDNA A630055G03 gene
mm9_v1_chr15_-_98608556_98608580	1.1664	HMX1.p2	BC114969|Wnt10b|22410|wingless related MMTV integration site 10b	AK029284|Wnt10b|22410|wingless related MMTV integration site 10b	NM_011718|Wnt10b|22410|wingless related MMTV integration site 10b	U30464|Wnt10b|22410|wingless related MMTV integration site 10b
mm9_v1_chr11_+_119464299_119464363	1.16451	HMX1.p2	AK087217|Rptor|74370|regulatory associated protein of MTOR, complex 1	NM_028898|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK029341|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK144082|Rptor|74370|regulatory associated protein of MTOR, complex 1	AK172276|Rptor|74370|regulatory associated protein of MTOR, complex 1
mm9_v1_chr2_+_165818203_165818241	1.16428	HMX1.p2	AK142306|Ncoa3|17979|nuclear receptor coactivator 3
mm9_v1_chr4_+_62280692_62280740	1.16284	HMX1.p2	AF319519|Rgs3|50780|regulator of G-protein signaling 3	NM_001081650|Rgs3|50780|regulator of G-protein signaling 3	NM_134257|Rgs3|50780|regulator of G-protein signaling 3	AK028445|Rgs3|50780|regulator of G-protein signaling 3	AF350047|Rgs3|50780|regulator of G-protein signaling 3
mm9_v1_chr4_-_134409254_134409295	1.16204	HMX1.p2	AY846873|Tmem57|66146|transmembrane protein 57	AY846874|Tmem57|66146|transmembrane protein 57	NM_025382|Tmem57|66146|transmembrane protein 57
mm9_v1_chr18_-_12394830_12394911	1.16176	HMX1.p2	AK044878|Npc1|18145|Niemann Pick type C1	AK170880|Npc1|18145|Niemann Pick type C1	AK171371|Npc1|18145|Niemann Pick type C1	AK087174|Npc1|18145|Niemann Pick type C1	AF003348|Npc1|18145|Niemann Pick type C1	AK040367|Npc1|18145|Niemann Pick type C1	BC052437|Npc1|18145|Niemann Pick type C1	BC054539|Npc1|18145|Niemann Pick type C1	NM_008720|Npc1|18145|Niemann Pick type C1
mm9_v1_chr7_-_30066642_30066696	1.15954	HMX1.p2	AK007792|Spint2|20733|serine protease inhibitor, Kunitz type 2
mm9_v1_chr2_+_49307005_49307084	1.15503	HMX1.p2	NM_172663|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)	AK031025|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)
mm9_v1_chr12_+_111976198_111976210	1.1532	HMX1.p2	AK136417|Wdr20a|69641|WD repeat domain 20A	BC064773|Wdr20a|69641|WD repeat domain 20A
mm9_v1_chr19_-_14672540_14672588	1.15074	HMX1.p2	AK134989|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	BC086631|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr11_+_69393851_69393992	1.14961	HMX1.p2	NM_001127233|Trp53|22059|transformation related protein 53	NM_011640|Trp53|22059|transformation related protein 53	X01237|Trp53|22059|transformation related protein 53	AK086845|Trp53|22059|transformation related protein 53	BC005448|Trp53|22059|transformation related protein 53	AF151353|Trp53|22059|transformation related protein 53	AK083750|Trp53|22059|transformation related protein 53	AK079711|Trp53|22059|transformation related protein 53	AK087834|Trp53|22059|transformation related protein 53	AK138777|Trp53|22059|transformation related protein 53	AK147815|Trp53|22059|transformation related protein 53	M13872|Trp53|22059|transformation related protein 53	AY212017|Trp53|22059|transformation related protein 53	X00741|Trp53|22059|transformation related protein 53	AB021961|Trp53|22059|transformation related protein 53	AB017815|Trp53|22059|transformation related protein 53	AB017816|Trp53|22059|transformation related protein 53	AB020317|Trp53|22059|transformation related protein 53	M13873|Trp53|22059|transformation related protein 53	EU031806|Trp53|22059|transformation related protein 53	M13874|Trp53|22059|transformation related protein 53	AF051368|Trp53|22059|transformation related protein 53
mm9_v1_chr13_-_12612537_12612714	1.14827	HMX1.p2	AK148351|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	AK041545|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	AK042414|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	AF358671|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain	NM_133643|Edaradd|171211|EDAR (ectodysplasin-A receptor)-associated death domain
mm9_v1_chr6_-_40386107_40386145	1.14564	HMX1.p2	AK145280|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene	AK147402|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene	AK054277|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene	NM_175528|E330009J07Rik|243780|RIKEN cDNA E330009J07 gene
mm9_v1_chr1_+_74283079_74283111	1.14551	HMX1.p2	AK152356|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr12_-_105990160_105990320	1.14537	HMX1.p2	BC019805|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)	AF430845|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)	NM_148948|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)
mm9_v1_chr2_-_13192850_13192974	1.14319	HMX1.p2	X63039|Rsu1|20163|Ras suppressor protein 1	BC003827|Rsu1|20163|Ras suppressor protein 1	NM_009105|Rsu1|20163|Ras suppressor protein 1	AK150011|Rsu1|20163|Ras suppressor protein 1	AK149835|Rsu1|20163|Ras suppressor protein 1	AK152655|Rsu1|20163|Ras suppressor protein 1	AK009288|Rsu1|20163|Ras suppressor protein 1	AK011857|Rsu1|20163|Ras suppressor protein 1	AK135491|Rsu1|20163|Ras suppressor protein 1	AK169076|Rsu1|20163|Ras suppressor protein 1
mm9_v1_chr6_+_88053362_88053458	1.1431	HMX1.p2	AK213986|Rpn1|103963|ribophorin I
mm9_v1_chr17_-_34251399_34251468	1.14269	HMX1.p2	AK188169|Brd2|14312|bromodomain containing 2
mm9_v1_chr1_-_173579128_173579145	1.13859	HMX1.p2	AK040678|Slamf7|75345|SLAM family member 7	AK089525|Slamf7|75345|SLAM family member 7
mm9_v1_chr14_+_56197282_56197411	1.13565	HMX1.p2	AK150708|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	AK150975|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	AK019390|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	BC088981|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	BC035549|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	D87909|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	NM_011189|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	AK008514|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	U60328|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha
mm9_v1_chr4_+_155317936_155318031	1.1351	HMX1.p2	AK004626|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	NM_001039157|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	NM_001039158|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	NM_001039159|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	NM_021402|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	AK042784|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	AK076265|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	AK017697|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)	AK010302|Ube2j2|140499|ubiquitin-conjugating enzyme E2, J2 homolog (yeast)
mm9_v1_chr1_+_173300485_173300547	1.13307	HMX1.p2	AK004821|Pvrl4|71740|poliovirus receptor-related 4	AK028479|Pvrl4|71740|poliovirus receptor-related 4	BC024948|Pvrl4|71740|poliovirus receptor-related 4
mm9_v1_chr4_+_154353269_154353401	1.13195	HMX1.p2	BC027074|Pank4|269614|pantothenate kinase 4
mm9_v1_chr2_-_87875293_87875294	1.1301	HMX1.p2	AB061228|Olfr73|117004|olfactory receptor 73	NM_054090|Olfr73|117004|olfactory receptor 73	BC140145|Olfr73|117004|olfactory receptor 73	BC143167|Olfr73|117004|olfactory receptor 73	BC146832|Olfr73|117004|olfactory receptor 73
mm9_v1_chr17_-_71351775_71351878	1.12819	HMX1.p2	NM_026064|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene
mm9_v1_chr1_+_182499015_182499087	1.12753	HMX1.p2	AK135977|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK159433|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK166104|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	X14206|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK028042|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK146677|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK165158|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK169326|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK152360|Parp1|11545|poly (ADP-ribose) polymerase family, member 1
mm9_v1_chr15_+_82930722_82930753	1.12694	HMX1.p2	AK002313|Serhl|68607|serine hydrolase-like	AK003827|Serhl|68607|serine hydrolase-like	AK154770|Serhl|68607|serine hydrolase-like	BC046342|Serhl|68607|serine hydrolase-like	BC024048|Serhl|68607|serine hydrolase-like
mm9_v1_chr13_-_55629845_55629941	1.12464	HMX1.p2	AK137520|Dok3|27261|docking protein 3	AF237580|Dok3|27261|docking protein 3	BC116922|Dok3|27261|docking protein 3	BC120535|Dok3|27261|docking protein 3	AF179242|Dok3|27261|docking protein 3	NM_013739|Dok3|27261|docking protein 3	AK154412|Dok3|27261|docking protein 3	AK154750|Dok3|27261|docking protein 3	AK155180|Dok3|27261|docking protein 3	AK156060|Dok3|27261|docking protein 3	AK172511|Dok3|27261|docking protein 3
mm9_v1_chr8_+_3631116_3631169	1.11944	HMX1.p2	AK088364|Stxbp2|20911|syntaxin binding protein 2	BC008102|Stxbp2|20911|syntaxin binding protein 2	U19520|Stxbp2|20911|syntaxin binding protein 2	AF263345|Stxbp2|20911|syntaxin binding protein 2	AK133419|Stxbp2|20911|syntaxin binding protein 2	NM_011503|Stxbp2|20911|syntaxin binding protein 2	D42068|Stxbp2|20911|syntaxin binding protein 2	BC003477|Stxbp2|20911|syntaxin binding protein 2
mm9_v1_chr2_-_37558794_37558806	1.11803	HMX1.p2	BC014710|Strbp|20744|spermatid perinuclear RNA binding protein
mm9_v1_chr11_+_17111895_17111966	1.11662	HMX1.p2	NM_178909|Wdr92|103784|WD repeat domain 92	AK088218|Wdr92|103784|WD repeat domain 92	AK047691|Wdr92|103784|WD repeat domain 92	AK142228|Wdr92|103784|WD repeat domain 92	AK033294|Wdr92|103784|WD repeat domain 92	BC096540|Wdr92|103784|WD repeat domain 92
mm9_v1_chr11_-_20641455_20641486	1.11182	HMX1.p2	AK029681|Aftph|216549|aftiphilin	AK138793|Aftph|216549|aftiphilin	BC052036|Aftph|216549|aftiphilin	NM_181411|Aftph|216549|aftiphilin
mm9_v1_chr2_+_13496394_13496520	1.11102	HMX1.p2	AK207271|Vim|22352|vimentin	AK012469|Vim|22352|vimentin
mm9_v1_chr9_+_107456969_107456986	1.11042	HMX1.p2	BC002173|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1	NM_019713|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1
mm9_v1_chr2_-_39081799_39081884	1.11039	HMX1.p2	AK002764|Ppp6c|67857|protein phosphatase 6, catalytic subunit	AK009104|Ppp6c|67857|protein phosphatase 6, catalytic subunit	NM_024209|Ppp6c|67857|protein phosphatase 6, catalytic subunit	BC002223|Ppp6c|67857|protein phosphatase 6, catalytic subunit
mm9_v1_chr5_-_135539929_135539990	1.10948	HMX1.p2	BC093484|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AF412035|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK003386|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK011005|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	AK151986|Wbscr22|66138|Williams Beuren syndrome chromosome region 22	NM_025375|Wbscr22|66138|Williams Beuren syndrome chromosome region 22
mm9_v1_chr10_+_80092400_80092421	1.1089	HMX1.p2	AK132871|Csnk1g2|103236|casein kinase 1, gamma 2	NM_001159591|Csnk1g2|103236|casein kinase 1, gamma 2	AK077076|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr5_-_38952777_38952930	1.10831	HMX1.p2	BC119358|Wdr1|22388|WD repeat domain 1	BC125295|Wdr1|22388|WD repeat domain 1	AK165225|Wdr1|22388|WD repeat domain 1	AK165323|Wdr1|22388|WD repeat domain 1	AK167813|Wdr1|22388|WD repeat domain 1	AK151146|Wdr1|22388|WD repeat domain 1	AF020055|Wdr1|22388|WD repeat domain 1	NM_011715|Wdr1|22388|WD repeat domain 1	AK153338|Wdr1|22388|WD repeat domain 1	AK170379|Wdr1|22388|WD repeat domain 1	AK167241|Wdr1|22388|WD repeat domain 1	AK169893|Wdr1|22388|WD repeat domain 1	AK156300|Wdr1|22388|WD repeat domain 1	AK167275|Wdr1|22388|WD repeat domain 1	AK004858|Wdr1|22388|WD repeat domain 1	AK169835|Wdr1|22388|WD repeat domain 1	BC049117|Wdr1|22388|WD repeat domain 1
mm9_v1_chr1_+_182499091_182499136	1.1011	HMX1.p2	AK030889|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK088679|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	BC012041|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	NM_007415|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK167699|Parp1|11545|poly (ADP-ribose) polymerase family, member 1
mm9_v1_chr10_-_79896330_79896385	1.09874	HMX1.p2	BC006860|Tcf3|21423|transcription factor 3	AK017617|Tcf3|21423|transcription factor 3	AK156265|Tcf3|21423|transcription factor 3	AK034777|Tcf3|21423|transcription factor 3	AK161009|Tcf3|21423|transcription factor 3	AK038738|Tcf3|21423|transcription factor 3
mm9_v1_chr11_+_72264668_72264732	1.09697	HMX1.p2	AK196252|Mybbp1a|18432|MYB binding protein (P160) 1a	AK190076|Mybbp1a|18432|MYB binding protein (P160) 1a	AK194300|Mybbp1a|18432|MYB binding protein (P160) 1a
mm9_v1_chr11_-_119971500_119971623	1.09687	HMX1.p2	AK195379|Slc38a10|72055|solute carrier family 38, member 10	AK176940|Slc38a10|72055|solute carrier family 38, member 10	AK182790|Slc38a10|72055|solute carrier family 38, member 10	BC055017|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr1_-_158869401_158869517	1.09621	HMX1.p2	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr3_+_96449506_96449522	1.09468	HMX1.p2	NM_001081053|Itga10|213119|integrin, alpha 10	BC115770|Itga10|213119|integrin, alpha 10
mm9_v1_chr7_+_108257288_108257396	1.09328	HMX1.p2	AK141949|Fchsd2|207278|FCH and double SH3 domains 2	NM_001146010|Fchsd2|207278|FCH and double SH3 domains 2	NM_199012|Fchsd2|207278|FCH and double SH3 domains 2	BC016532|Fchsd2|207278|FCH and double SH3 domains 2	AK140322|Fchsd2|207278|FCH and double SH3 domains 2	AK157054|Fchsd2|207278|FCH and double SH3 domains 2	AK156841|Fchsd2|207278|FCH and double SH3 domains 2	BC060647|Fchsd2|207278|FCH and double SH3 domains 2	AK165341|Fchsd2|207278|FCH and double SH3 domains 2	AK122368|Fchsd2|207278|FCH and double SH3 domains 2
mm9_v1_chr14_+_102053172_102053276	1.09253	HMX1.p2	AK050278|Uchl3|50933|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	NM_016723|Uchl3|50933|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	AB033370|Uchl3|50933|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	BC048481|Uchl3|50933|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	BC029242|Uchl3|50933|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	AF247358|Uchl3|50933|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
mm9_v1_chr17_+_24857007_24857051	1.09156	HMX1.p2	NM_008503|Rps2|16898|ribosomal protein S2
mm9_v1_chr3_+_89234339_89234606	1.09023	HMX1.p2	BC025640|Pygo2|68911|pygopus 2	AK209495|Pygo2|68911|pygopus 2
mm9_v1_chr18_-_47528483_47528523	1.08984	HMX1.p2	BC059238|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK042751|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_018744|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK082711|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm9_v1_chrX_-_7753254_7753306	1.08966	HMX1.p2	BC113777|Tbc1d25|209815|TBC1 domain family, member 25	BC128565|Tbc1d25|209815|TBC1 domain family, member 25	BC128566|Tbc1d25|209815|TBC1 domain family, member 25	AK078145|Tbc1d25|209815|TBC1 domain family, member 25	NM_001166437|Tbc1d25|209815|TBC1 domain family, member 25	NM_172478|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr7_+_104100014_104100062	1.08803	HMX1.p2	AK046799|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK046801|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	NM_153591|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK138260|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr4_+_116230293_116230350	1.08709	HMX1.p2	AK037224|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK133761|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK019942|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	BC066034|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	NM_029868|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr16_-_98183757_98183799	1.08669	HMX1.p2	BC051176|Zfp295|114565|zinc finger protein 295	AK129313|Zfp295|114565|zinc finger protein 295	AK031118|Zfp295|114565|zinc finger protein 295	AK080932|Zfp295|114565|zinc finger protein 295	AK145072|Zfp295|114565|zinc finger protein 295	AK034057|Zfp295|114565|zinc finger protein 295	NM_001081684|Zfp295|114565|zinc finger protein 295	NM_001081685|Zfp295|114565|zinc finger protein 295	NM_175428|Zfp295|114565|zinc finger protein 295	AK170928|Zfp295|114565|zinc finger protein 295
mm9_v1_chr11_-_46125777_46125868	1.08608	HMX1.p2	AK018280|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AF334144|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AK030397|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AK147971|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	BC056974|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	AK147586|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2	NM_133769|Cyfip2|76884|cytoplasmic FMR1 interacting protein 2
mm9_v1_chr10_+_17775737_17775881	1.08576	HMX1.p2	NM_001111065|Reps1|19707|RalBP1 associated Eps domain containing protein	NM_009048|Reps1|19707|RalBP1 associated Eps domain containing protein	BC087547|Reps1|19707|RalBP1 associated Eps domain containing protein	AK150284|Reps1|19707|RalBP1 associated Eps domain containing protein	AK151309|Reps1|19707|RalBP1 associated Eps domain containing protein
mm9_v1_chr8_+_119682034_119682036	1.08553	HMX1.p2	NM_001081151|Gan|209239|giant axonal neuropathy	BC112432|Gan|209239|giant axonal neuropathy	AK039455|Gan|209239|giant axonal neuropathy
mm9_v1_chr5_+_135462204_135462439	1.08505	HMX1.p2	AF095905|Cldn3|12739|claudin 3	BC012650|Cldn3|12739|claudin 3	AF087821|Cldn3|12739|claudin 3	BC023269|Cldn3|12739|claudin 3	AK165808|Cldn3|12739|claudin 3
mm9_v1_chr4_+_139131050_139131050	1.08448	HMX1.p2	NM_183148|Iffo2|212632|intermediate filament family orphan 2
mm9_v1_chr2_-_144157097_144157121	1.08169	HMX1.p2	AY090538|Ovol2|107586|ovo-like 2 (Drosophila)	NM_152947|Ovol2|107586|ovo-like 2 (Drosophila)	AB101295|Ovol2|107586|ovo-like 2 (Drosophila)
mm9_v1_chr11_-_97643677_97643690	1.08103	HMX1.p2	AK168133|Rpl23|65019|ribosomal protein L23	AF287271|Rpl23|65019|ribosomal protein L23	BC025918|Rpl23|65019|ribosomal protein L23	BC081448|Rpl23|65019|ribosomal protein L23
mm9_v1_chr6_+_126889979_126890004	1.08021	HMX1.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr17_-_51972514_51972614	1.0799	HMX1.p2	BC011132|Satb1|20230|special AT-rich sequence binding protein 1	NM_001163632|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr4_-_115612507_115612530	1.07324	HMX1.p2	BC050912|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AB037698|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AF448118|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AK141654|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_001025567|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_130865|Dmbx1|140477|diencephalon/mesencephalon homeobox 1
mm9_v1_chr5_+_91197542_91197576	1.07221	HMX1.p2	AF219112|Ppbp|57349|pro-platelet basic protein	AF278700|Ppbp|57349|pro-platelet basic protein	AK010273|Ppbp|57349|pro-platelet basic protein	AK157141|Ppbp|57349|pro-platelet basic protein	AK171720|Ppbp|57349|pro-platelet basic protein	NM_023785|Ppbp|57349|pro-platelet basic protein	AK157077|Ppbp|57349|pro-platelet basic protein	AB042817|Ppbp|57349|pro-platelet basic protein	AK158061|Ppbp|57349|pro-platelet basic protein	BC127043|Ppbp|57349|pro-platelet basic protein	BC127044|Ppbp|57349|pro-platelet basic protein
mm9_v1_chrX_-_34442878_34442893	1.07148	HMX1.p2	AK042690|Nkrf|77286|NF-kappaB repressing factor	NM_029891|Nkrf|77286|NF-kappaB repressing factor
mm9_v1_chr11_+_70027397_70027411	1.06948	HMX1.p2	NM_153081|Slc16a11|216867|solute carrier family 16 (monocarboxylic acid transporters), member 11
mm9_v1_chr2_-_85504611_85504611	1.06831	HMX1.p2	BC120642|Olfr154|27216|olfactory receptor 154	BC120644|Olfr154|27216|olfactory receptor 154	NM_013728|Olfr154|27216|olfactory receptor 154
mm9_v1_chr19_-_12575943_12576153	1.06564	HMX1.p2	BC058647|Dtx4|207521|deltex 4 homolog (Drosophila)
mm9_v1_chr11_-_97643570_97643598	1.06464	HMX1.p2	AK139855|Rpl23|65019|ribosomal protein L23
mm9_v1_chr19_+_8840883_8840977	1.06311	HMX1.p2	AK052937|Nxf1|53319|nuclear RNA export factor 1 homolog (S. cerevisiae)
mm9_v1_chr7_+_104520120_104520143	1.06285	HMX1.p2	AK166897|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	NM_199035|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	AK141341|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	AK166755|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)	BC061244|Alg8|381903|asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase)
mm9_v1_chr7_+_104100067_104100098	1.05705	HMX1.p2	AK164179|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK047091|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	AK050718|Nars2|244141|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
mm9_v1_chr10_+_80644982_80645055	1.05625	HMX1.p2	
mm9_v1_chr2_-_28771940_28771959	1.05083	HMX1.p2	NM_019446|Barhl1|54422|BarH-like 1 (Drosophila)	AB043980|Barhl1|54422|BarH-like 1 (Drosophila)	BC055731|Barhl1|54422|BarH-like 1 (Drosophila)	NM_001164186|Barhl1|54422|BarH-like 1 (Drosophila)
mm9_v1_chr8_+_73242422_73242441	1.05053	HMX1.p2	NM_001195253|Gm3336|100041434|predicted gene 3336
mm9_v1_chr4_-_148540740_148540815	1.05044	HMX1.p2	BC008646|Pgd|110208|phosphogluconate dehydrogenase	AK166947|Pgd|110208|phosphogluconate dehydrogenase	BC011329|Pgd|110208|phosphogluconate dehydrogenase	AK166733|Pgd|110208|phosphogluconate dehydrogenase	AK167215|Pgd|110208|phosphogluconate dehydrogenase	AK153409|Pgd|110208|phosphogluconate dehydrogenase	AK150490|Pgd|110208|phosphogluconate dehydrogenase	AK151380|Pgd|110208|phosphogluconate dehydrogenase	AK151993|Pgd|110208|phosphogluconate dehydrogenase	AK152758|Pgd|110208|phosphogluconate dehydrogenase	AK152894|Pgd|110208|phosphogluconate dehydrogenase	AK155027|Pgd|110208|phosphogluconate dehydrogenase	AK161869|Pgd|110208|phosphogluconate dehydrogenase	AK168251|Pgd|110208|phosphogluconate dehydrogenase	AK002894|Pgd|110208|phosphogluconate dehydrogenase	AK077110|Pgd|110208|phosphogluconate dehydrogenase	AK150210|Pgd|110208|phosphogluconate dehydrogenase	AK145602|Pgd|110208|phosphogluconate dehydrogenase	BC014793|Pgd|110208|phosphogluconate dehydrogenase	NM_001081274|Pgd|110208|phosphogluconate dehydrogenase
mm9_v1_chr8_+_72315061_72315156	1.04962	HMX1.p2	BC138721|Atp13a1|170759|ATPase type 13A1	BC138722|Atp13a1|170759|ATPase type 13A1	NM_133224|Atp13a1|170759|ATPase type 13A1	AB035381|Atp13a1|170759|ATPase type 13A1	AK052057|Atp13a1|170759|ATPase type 13A1	BC078635|Atp13a1|170759|ATPase type 13A1
mm9_v1_chr7_+_52825672_52825751	1.04932	HMX1.p2	AK037482|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	AF031467|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC048072|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	NM_009737|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	U68526|Bcat2|12036|branched chain aminotransferase 2, mitochondrial	BC017688|Bcat2|12036|branched chain aminotransferase 2, mitochondrial
mm9_v1_chr16_-_97832672_97832690	1.04782	HMX1.p2	AF113596|Tmprss2|50528|transmembrane protease, serine 2	AF243500|Tmprss2|50528|transmembrane protease, serine 2	AF199362|Tmprss2|50528|transmembrane protease, serine 2	AK146047|Tmprss2|50528|transmembrane protease, serine 2
mm9_v1_chr7_-_87377430_87377540	1.04744	HMX1.p2	AF173010|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AB006463|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK165472|Cib1|23991|calcium and integrin binding 1 (calmyrin)	BC003714|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK010345|Cib1|23991|calcium and integrin binding 1 (calmyrin)	BC054385|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK027915|Cib1|23991|calcium and integrin binding 1 (calmyrin)	NM_011870|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK088450|Cib1|23991|calcium and integrin binding 1 (calmyrin)	AK152805|Cib1|23991|calcium and integrin binding 1 (calmyrin)
mm9_v1_chr7_-_133558344_133558387	1.0456	HMX1.p2	AK172008|Cd19|12478|CD19 antigen	AK089835|Cd19|12478|CD19 antigen	AK163608|Cd19|12478|CD19 antigen	NM_009844|Cd19|12478|CD19 antigen	AK156125|Cd19|12478|CD19 antigen
mm9_v1_chr11_-_33413625_33413657	1.03994	HMX1.p2	AJ271458|Ranbp17|66011|RAN binding protein 17	AK046865|Ranbp17|66011|RAN binding protein 17	BC033503|Ranbp17|66011|RAN binding protein 17	AK035897|Ranbp17|66011|RAN binding protein 17	AK016583|Ranbp17|66011|RAN binding protein 17
mm9_v1_chr17_-_26978455_26978553	1.03802	HMX1.p2	NM_008700|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	X75415|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chr17_-_31992708_31992780	1.0372	HMX1.p2	U11494|Sik1|17691|salt inducible kinase 1	AK141817|Sik1|17691|salt inducible kinase 1	NM_010831|Sik1|17691|salt inducible kinase 1	AK172427|Sik1|17691|salt inducible kinase 1
mm9_v1_chr5_+_120881778_120882006	1.03637	HMX1.p2	U61155|Lhx5|16873|LIM homeobox protein 5	AK140208|Lhx5|16873|LIM homeobox protein 5	NM_008499|Lhx5|16873|LIM homeobox protein 5	AK048778|Lhx5|16873|LIM homeobox protein 5	AK033927|Lhx5|16873|LIM homeobox protein 5	BC057585|Lhx5|16873|LIM homeobox protein 5
mm9_v1_chr19_-_4269161_4269181	1.03483	HMX1.p2	AK148293|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK171514|Ssh3|245857|slingshot homolog 3 (Drosophila)	AB099289|Ssh3|245857|slingshot homolog 3 (Drosophila)	BC028922|Ssh3|245857|slingshot homolog 3 (Drosophila)	NM_198113|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK038981|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK149880|Ssh3|245857|slingshot homolog 3 (Drosophila)	AK166342|Ssh3|245857|slingshot homolog 3 (Drosophila)
mm9_v1_chr2_-_126444323_126444348	1.0273	HMX1.p2	AF109137|Hdc|15186|histidine decarboxylase
mm9_v1_chr14_+_119537486_119537562	1.02582	HMX1.p2	NM_015820|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	AB024567|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	BC117529|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3	BC118035|Hs6st3|50787|heparan sulfate 6-O-sulfotransferase 3
mm9_v1_chr15_-_85864206_85864206	1.02432	HMX1.p2	AF031572|Celsr1|12614|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	NM_009886|Celsr1|12614|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)
mm9_v1_chr11_-_77978936_77979062	1.02404	HMX1.p2	AK178796|Traf4|22032|TNF receptor associated factor 4	AF233449|Traf4|22032|TNF receptor associated factor 4	AK035056|Traf4|22032|TNF receptor associated factor 4	AK040877|Traf4|22032|TNF receptor associated factor 4	BC020455|Traf4|22032|TNF receptor associated factor 4	AK053900|Traf4|22032|TNF receptor associated factor 4	NM_009423|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr11_-_118151298_118151557	1.02354	HMX1.p2	AK129363|Usp36|72344|ubiquitin specific peptidase 36	AK079342|Usp36|72344|ubiquitin specific peptidase 36	AK165635|Usp36|72344|ubiquitin specific peptidase 36	AK049205|Usp36|72344|ubiquitin specific peptidase 36	AK028572|Usp36|72344|ubiquitin specific peptidase 36	NM_001033528|Usp36|72344|ubiquitin specific peptidase 36
mm9_v1_chr17_-_47969979_47970125	1.02288	HMX1.p2	U57820|Mdfi|17240|MyoD family inhibitor
mm9_v1_chr19_-_34601874_34601967	1.02268	HMX1.p2	AK154804|Lipa|16889|lysosomal acid lipase A	BC058564|Lipa|16889|lysosomal acid lipase A	AK088659|Lipa|16889|lysosomal acid lipase A	AK149791|Lipa|16889|lysosomal acid lipase A	AK169567|Lipa|16889|lysosomal acid lipase A	AK153624|Lipa|16889|lysosomal acid lipase A	AK083099|Lipa|16889|lysosomal acid lipase A	AK164007|Lipa|16889|lysosomal acid lipase A	NM_001111100|Lipa|16889|lysosomal acid lipase A	NM_021460|Lipa|16889|lysosomal acid lipase A
mm9_v1_chr7_+_25155279_25155362	1.02208	HMX1.p2	AK010943|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_001163510|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	NM_008433|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK155910|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	BC010274|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr4_-_57929087_57929168	1.01819	HMX1.p2	BC030929|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK085537|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	BC095953|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	NM_178727|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene	AK035369|D630039A03Rik|242484|RIKEN cDNA D630039A03 gene
mm9_v1_chr4_-_147662005_147662073	1.01583	HMX1.p2	BC070441|Ptchd2|242748|patched domain containing 2	BC072569|Ptchd2|242748|patched domain containing 2	AK090326|Ptchd2|242748|patched domain containing 2	NM_001083342|Ptchd2|242748|patched domain containing 2
mm9_v1_chr15_+_84550474_84550535	1.0139	HMX1.p2	NM_001164627|Arhgap8|73167|Rho GTPase activating protein 8	NM_001164628|Arhgap8|73167|Rho GTPase activating protein 8	BC010306|Arhgap8|73167|Rho GTPase activating protein 8	AK086816|Arhgap8|73167|Rho GTPase activating protein 8	NM_028455|Arhgap8|73167|Rho GTPase activating protein 8	AK040142|Arhgap8|73167|Rho GTPase activating protein 8	AK088242|Arhgap8|73167|Rho GTPase activating protein 8	AK014171|Arhgap8|73167|Rho GTPase activating protein 8
mm9_v1_chr9_-_99776467_99776588	1.01326	HMX1.p2	BC069948|Sox14|20669|SRY-box containing gene 14	AK138208|Sox14|20669|SRY-box containing gene 14	BC055767|Sox14|20669|SRY-box containing gene 14	BC083360|Sox14|20669|SRY-box containing gene 14	BC100555|Sox14|20669|SRY-box containing gene 14	NM_011440|Sox14|20669|SRY-box containing gene 14
mm9_v1_chr11_+_117623703_117623821	1.01312	HMX1.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr10_+_80217947_80217975	1.01286	HMX1.p2	AK035144|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	AY196089|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	NM_199322|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	AY376663|Dot1l|208266|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm9_v1_chr1_-_66864088_66864173	1.01228	HMX1.p2	AK172645|1110028C15Rik|68691|RIKEN cDNA 1110028C15 gene	AK220534|1110028C15Rik|68691|RIKEN cDNA 1110028C15 gene	AK145440|1110028C15Rik|68691|RIKEN cDNA 1110028C15 gene	NM_001122738|1110028C15Rik|68691|RIKEN cDNA 1110028C15 gene	NM_177645|1110028C15Rik|68691|RIKEN cDNA 1110028C15 gene
mm9_v1_chr1_+_55145132_55145232	1.01132	HMX1.p2	AK088121|Hspe1|15528|heat shock protein 1 (chaperonin 10)	U09659|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC099385|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK151935|Hspe1|15528|heat shock protein 1 (chaperonin 10)	AK133876|Hspe1|15528|heat shock protein 1 (chaperonin 10)	BC024385|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr5_+_36807807_36807839	1.00946	HMX1.p2	AK161688|Grpel1|17713|GrpE-like 1, mitochondrial	AK048732|Grpel1|17713|GrpE-like 1, mitochondrial	NM_024478|Grpel1|17713|GrpE-like 1, mitochondrial	AK089113|Grpel1|17713|GrpE-like 1, mitochondrial	AK050445|Grpel1|17713|GrpE-like 1, mitochondrial
mm9_v1_chr13_-_38620304_38620305	1.00836	HMX1.p2	AK224957|Txndc5|105245|thioredoxin domain containing 5	AK224958|Txndc5|105245|thioredoxin domain containing 5	AK224962|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr5_+_115956682_115956792	1.00785	HMX1.p2	AK171226|Pxn|19303|paxillin	AK148060|Pxn|19303|paxillin	NM_011223|Pxn|19303|paxillin	NM_133915|Pxn|19303|paxillin	AK149933|Pxn|19303|paxillin	AK171436|Pxn|19303|paxillin	BC025493|Pxn|19303|paxillin	AK167299|Pxn|19303|paxillin	AF293882|Pxn|19303|paxillin
mm9_v1_chr9_+_45714587_45714651	1.00674	HMX1.p2	AK050638|Rnf214|235315|ring finger protein 214	BC056456|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	NM_008794|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr11_-_82684653_82684724	1.0037	HMX1.p2	AK159442|Rffl|67338|ring finger and FYVE like domain containing protein	AK150541|Rffl|67338|ring finger and FYVE like domain containing protein	AK169988|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001007465|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164569|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164571|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr11_-_100334035_100334069	1.00321	HMX1.p2	AK169910|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr15_-_85408499_85408499	1.00227	HMX1.p2	BC066003|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_001163634|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr2_-_160191800_160191946	1.00214	HMX1.p2	AK131926|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm9_v1_chr19_+_40905768_40905801	1.00057	HMX1.p2	AK052506|Ccnj|240665|cyclin J	NM_172839|Ccnj|240665|cyclin J	AK157841|Ccnj|240665|cyclin J	BC120921|Ccnj|240665|cyclin J	BC120922|Ccnj|240665|cyclin J	BC117559|Ccnj|240665|cyclin J
mm9_v1_chr5_-_138227400_138227490	0.999711	HMX1.p2	BC026876|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr19_-_12869863_12869990	0.999086	HMX1.p2	AK147502|Zfp91|109910|zinc finger protein 91
mm9_v1_chr11_+_5420920_5421028	0.996294	HMX1.p2	AF027963|Xbp1|22433|X-box binding protein 1	NM_013842|Xbp1|22433|X-box binding protein 1	AK007724|Xbp1|22433|X-box binding protein 1	AK145241|Xbp1|22433|X-box binding protein 1	BC029197|Xbp1|22433|X-box binding protein 1	BC008153|Xbp1|22433|X-box binding protein 1
mm9_v1_chr4_+_134420419_134420535	0.99501	HMX1.p2	BC145805|Rhd|19746|Rh blood group, D antigen	NM_011270|Rhd|19746|Rh blood group, D antigen	AF057524|Rhd|19746|Rh blood group, D antigen	AK089642|Rhd|19746|Rh blood group, D antigen	AF069311|Rhd|19746|Rh blood group, D antigen	AK079335|Rhd|19746|Rh blood group, D antigen	AK171641|Rhd|19746|Rh blood group, D antigen	AB015189|Rhd|19746|Rh blood group, D antigen	AB015190|Rhd|19746|Rh blood group, D antigen	AF047827|Rhd|19746|Rh blood group, D antigen	AK157850|Rhd|19746|Rh blood group, D antigen	AF012430|Rhd|19746|Rh blood group, D antigen
mm9_v1_chr6_-_125444695_125444710	0.994366	HMX1.p2	L08115|Cd9|12527|CD9 antigen
mm9_v1_chr8_-_23170545_23170545	0.993131	HMX1.p2	NM_007511|Atp7b|11979|ATPase, Cu++ transporting, beta polypeptide
mm9_v1_chr4_-_116828657_116828766	0.992773	HMX1.p2	BC051446|Rps8|20116|ribosomal protein S8	AK010306|Rps8|20116|ribosomal protein S8	AK011642|Rps8|20116|ribosomal protein S8	AK009023|Rps8|20116|ribosomal protein S8	AK011058|Rps8|20116|ribosomal protein S8	AK012435|Rps8|20116|ribosomal protein S8	AK012562|Rps8|20116|ribosomal protein S8	AK019223|Rps8|20116|ribosomal protein S8	AK088660|Rps8|20116|ribosomal protein S8	AK145478|Rps8|20116|ribosomal protein S8	AK146303|Rps8|20116|ribosomal protein S8	AK146806|Rps8|20116|ribosomal protein S8	AK151544|Rps8|20116|ribosomal protein S8	AK166848|Rps8|20116|ribosomal protein S8	AK168609|Rps8|20116|ribosomal protein S8	BC086899|Rps8|20116|ribosomal protein S8	BC100594|Rps8|20116|ribosomal protein S8	BC081464|Rps8|20116|ribosomal protein S8	AK011048|Rps8|20116|ribosomal protein S8	AK012665|Rps8|20116|ribosomal protein S8	AK010650|Rps8|20116|ribosomal protein S8	NM_009098|Rps8|20116|ribosomal protein S8
mm9_v1_chrX_-_165111764_165111833	0.992025	HMX1.p2	AK146208|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	BC010226|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	AK148898|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	AF117066|Msl3|17692|male-specific lethal 3 homolog (Drosophila)	NM_010832|Msl3|17692|male-specific lethal 3 homolog (Drosophila)
mm9_v1_chr15_+_81977766_81977845	0.991891	HMX1.p2	AK217643|Srebf2|20788|sterol regulatory element binding factor 2	AF374267|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr19_-_4269096_4269129	0.989723	HMX1.p2	AK164662|Ssh3|245857|slingshot homolog 3 (Drosophila)
mm9_v1_chr2_+_25127985_25128074	0.989334	HMX1.p2	NM_175300|Anapc2|99152|anaphase promoting complex subunit 2	AK033784|Anapc2|99152|anaphase promoting complex subunit 2	BC137583|Anapc2|99152|anaphase promoting complex subunit 2	AK154465|Anapc2|99152|anaphase promoting complex subunit 2	AK170676|Anapc2|99152|anaphase promoting complex subunit 2	BC096381|Anapc2|99152|anaphase promoting complex subunit 2	AK129351|Anapc2|99152|anaphase promoting complex subunit 2	BC027351|Anapc2|99152|anaphase promoting complex subunit 2
mm9_v1_chr19_+_47165272_47165288	0.987991	HMX1.p2	AK147950|Pdcd11|18572|programmed cell death 11	AK160767|Pdcd11|18572|programmed cell death 11	BC010844|Pdcd11|18572|programmed cell death 11
mm9_v1_chr2_+_74517614_74517665	0.986629	HMX1.p2	AK054090|Hoxd11|15431|homeobox D11
mm9_v1_chr15_-_9459496_9459589	0.986558	HMX1.p2	AF078906|Il7r|16197|interleukin 7 receptor	AK041838|Il7r|16197|interleukin 7 receptor	M29697|Il7r|16197|interleukin 7 receptor	AK042264|Il7r|16197|interleukin 7 receptor	AK154215|Il7r|16197|interleukin 7 receptor	BC089571|Il7r|16197|interleukin 7 receptor	AK154516|Il7r|16197|interleukin 7 receptor
mm9_v1_chr3_-_89017811_89017848	0.986442	HMX1.p2	AK163982|Mtx1|17827|metaxin 1	AK165547|Mtx1|17827|metaxin 1	L36962|Mtx1|17827|metaxin 1	BC023071|Mtx1|17827|metaxin 1	AK159316|Mtx1|17827|metaxin 1	AK165923|Mtx1|17827|metaxin 1	L10897|Mtx1|17827|metaxin 1	AK086135|Mtx1|17827|metaxin 1
mm9_v1_chr5_-_23953594_23953663	0.98204	HMX1.p2	AY603379|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AK008109|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	BC019547|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	AB030183|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1	NM_022418|Tmub1|64295|transmembrane and ubiquitin-like domain containing 1
mm9_v1_chr5_-_30848154_30848208	0.979418	HMX1.p2	BC099558|Cib4|73259|calcium and integrin binding family member 4	BC118938|Cib4|73259|calcium and integrin binding family member 4	AK006670|Cib4|73259|calcium and integrin binding family member 4	NM_028483|Cib4|73259|calcium and integrin binding family member 4
mm9_v1_chr15_-_81688686_81688755	0.977092	HMX1.p2	BC094031|Tob2|57259|transducer of ERBB2, 2	BC021869|Tob2|57259|transducer of ERBB2, 2	AK049766|Tob2|57259|transducer of ERBB2, 2	AK080817|Tob2|57259|transducer of ERBB2, 2	AK143542|Tob2|57259|transducer of ERBB2, 2	AK037631|Tob2|57259|transducer of ERBB2, 2	AK044623|Tob2|57259|transducer of ERBB2, 2	NM_020507|Tob2|57259|transducer of ERBB2, 2
mm9_v1_chr9_-_41932371_41932387	0.977007	HMX1.p2	AK147303|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing	NM_011436|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chr2_+_146047656_146047846	0.975366	HMX1.p2	BC051240|Insm1|53626|insulinoma-associated 1	NM_016889|Insm1|53626|insulinoma-associated 1	AF044669|Insm1|53626|insulinoma-associated 1	BC082809|Insm1|53626|insulinoma-associated 1
mm9_v1_chr1_+_192922288_192922292	0.974733	HMX1.p2	AK020278|Batf3|381319|basic leucine zipper transcription factor, ATF-like 3	BC117083|Batf3|381319|basic leucine zipper transcription factor, ATF-like 3	BC117085|Batf3|381319|basic leucine zipper transcription factor, ATF-like 3	NM_030060|Batf3|381319|basic leucine zipper transcription factor, ATF-like 3
mm9_v1_chr14_+_56983847_56983904	0.974356	HMX1.p2	BC109010|Atp12a|192113|ATPase, H+/K+ transporting, nongastric, alpha polypeptide	BC109011|Atp12a|192113|ATPase, H+/K+ transporting, nongastric, alpha polypeptide	NM_138652|Atp12a|192113|ATPase, H+/K+ transporting, nongastric, alpha polypeptide
mm9_v1_chr15_+_79521293_79521438	0.974203	HMX1.p2	AK150068|Gtpbp1|14904|GTP binding protein 1	AK150185|Gtpbp1|14904|GTP binding protein 1	AK158342|Gtpbp1|14904|GTP binding protein 1	AK004612|Gtpbp1|14904|GTP binding protein 1	AK147717|Gtpbp1|14904|GTP binding protein 1	AK170091|Gtpbp1|14904|GTP binding protein 1	BC046228|Gtpbp1|14904|GTP binding protein 1	NM_013818|Gtpbp1|14904|GTP binding protein 1	U87965|Gtpbp1|14904|GTP binding protein 1
mm9_v1_chr11_-_120900678_120900745	0.973811	HMX1.p2	CT010368|Cd7|12516|CD7 antigen	BC024376|Cd7|12516|CD7 antigen	D10329|Cd7|12516|CD7 antigen	NM_009854|Cd7|12516|CD7 antigen	AK136444|Cd7|12516|CD7 antigen	AK154339|Cd7|12516|CD7 antigen
mm9_v1_chr1_+_165925016_165925075	0.967964	HMX1.p2	AK139786|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	BC052693|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	AK013137|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	BC038687|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	BC050143|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene	NM_027279|2810422O20Rik|69962|RIKEN cDNA 2810422O20 gene
mm9_v1_chr7_+_29606244_29606259	0.96764	HMX1.p2	AK006480|Hnrnpl|15388|heterogeneous nuclear ribonucleoprotein L
mm9_v1_chr5_-_135096236_135096321	0.967602	HMX1.p2	AK202900|Eif4h|22384|eukaryotic translation initiation factor 4H	AK197136|Eif4h|22384|eukaryotic translation initiation factor 4H	AK192982|Eif4h|22384|eukaryotic translation initiation factor 4H	AK200162|Eif4h|22384|eukaryotic translation initiation factor 4H	AK195162|Eif4h|22384|eukaryotic translation initiation factor 4H	AK191422|Eif4h|22384|eukaryotic translation initiation factor 4H	AK191093|Eif4h|22384|eukaryotic translation initiation factor 4H	AK192082|Eif4h|22384|eukaryotic translation initiation factor 4H	AK194320|Eif4h|22384|eukaryotic translation initiation factor 4H	AK195976|Eif4h|22384|eukaryotic translation initiation factor 4H	AK197414|Eif4h|22384|eukaryotic translation initiation factor 4H	AK202850|Eif4h|22384|eukaryotic translation initiation factor 4H	AK204156|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr7_+_127986324_127986492	0.967011	HMX1.p2	AK028524|Eef2k|13631|eukaryotic elongation factor-2 kinase	BC003433|Eef2k|13631|eukaryotic elongation factor-2 kinase	NM_007908|Eef2k|13631|eukaryotic elongation factor-2 kinase
mm9_v1_chr1_-_12980994_12981257	0.964194	HMX1.p2	BC117943|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	BC117944|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK048882|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK041736|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	NM_172841|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK028758|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1
mm9_v1_chr7_-_17402066_17402094	0.96411	HMX1.p2	AK156156|Fkrp|243853|fukutin related protein	AK135089|Fkrp|243853|fukutin related protein	AK168308|Fkrp|243853|fukutin related protein	NM_173430|Fkrp|243853|fukutin related protein	AK166068|Fkrp|243853|fukutin related protein
mm9_v1_chr4_+_111087610_111087629	0.962729	HMX1.p2	AK075885|Bend5|67621|BEN domain containing 5	NM_026279|Bend5|67621|BEN domain containing 5	AK014057|Bend5|67621|BEN domain containing 5
mm9_v1_chr5_-_67490295_67490393	0.957273	HMX1.p2	AK052579|Phox2b|18935|paired-like homeobox 2b	BC079610|Phox2b|18935|paired-like homeobox 2b	NM_008888|Phox2b|18935|paired-like homeobox 2b	Y14493|Phox2b|18935|paired-like homeobox 2b
mm9_v1_chr11_+_117687204_117687292	0.954474	HMX1.p2	NM_027827|Afmid|71562|arylformamidase	AF399717|Afmid|71562|arylformamidase	AY099479|Afmid|71562|arylformamidase	BC066780|Afmid|71562|arylformamidase	BC043309|Afmid|71562|arylformamidase
mm9_v1_chr6_-_39675456_39675512	0.954279	HMX1.p2	AK140431|Braf|109880|Braf transforming gene	NM_139294|Braf|109880|Braf transforming gene
mm9_v1_chrX_+_12870471_12870561	0.954127	HMX1.p2	AK002917|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr17_-_35312945_35312945	0.952811	HMX1.p2	AK006184|Aif1|11629|allograft inflammatory factor 1	AK006562|Aif1|11629|allograft inflammatory factor 1	NM_019467|Aif1|11629|allograft inflammatory factor 1
mm9_v1_chr7_-_34798901_34798960	0.948167	HMX1.p2	AY293278|Abpb|233099|androgen binding protein beta	AY293281|Abpg|110187|androgen binding protein gamma	BC127149|Abpb|233099|androgen binding protein beta	BC057695|Abpb|233099|androgen binding protein beta	NM_001100464|Abpb|233099|androgen binding protein beta
mm9_v1_chr17_-_71351523_71351579	0.94647	HMX1.p2	AK045160|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	AK168016|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	AK018348|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	AK159151|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	BC020282|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	AK167553|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	AK151265|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene	AK013776|2900073G15Rik|67268|RIKEN cDNA 2900073G15 gene
mm9_v1_chr2_+_38367184_38367395	0.945567	HMX1.p2	AK029266|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AF218847|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_021606|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK086700|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK011519|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075836|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK018168|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK004925|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK075717|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK089919|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	BC019524|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK170757|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	NM_001159631|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr11_-_99957489_99957554	0.943971	HMX1.p2	BC140965|Krt35|53617|keratin 35	BC100542|Krt35|53617|keratin 35	NM_016880|Krt35|53617|keratin 35	AF020790|Krt35|53617|keratin 35	AK132593|Krt35|53617|keratin 35
mm9_v1_chr9_+_107457062_107457103	0.943732	HMX1.p2	AF132851|Rassf1|56289|Ras association (RalGDS/AF-6) domain family member 1
mm9_v1_chr7_-_17641980_17642027	0.943551	HMX1.p2	BC120587|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	AF060194|Hif3a|53417|hypoxia inducible factor 3, alpha subunit	NM_016868|Hif3a|53417|hypoxia inducible factor 3, alpha subunit
mm9_v1_chr16_-_90144013_90144100	0.94117	HMX1.p2	BC065126|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	AK043966|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr10_-_63552994_63553028	0.939553	HMX1.p2	AK036366|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK163753|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035773|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035858|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035882|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	NM_178678|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK032485|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK036180|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3
mm9_v1_chr12_-_77810949_77811009	0.939503	HMX1.p2	S66283|Spnb1|20741|spectrin beta 1
mm9_v1_chr3_-_51081286_51081359	0.939075	HMX1.p2	AF256218|Elf2|69257|E74-like factor 2	AF256219|Elf2|69257|E74-like factor 2
mm9_v1_chr12_+_53198729_53198769	0.939064	HMX1.p2	NM_029760|Nubpl|76826|nucleotide binding protein-like	AK152377|Nubpl|76826|nucleotide binding protein-like	AK083643|Nubpl|76826|nucleotide binding protein-like	BC062175|Nubpl|76826|nucleotide binding protein-like	AK010827|Nubpl|76826|nucleotide binding protein-like	AK141257|Nubpl|76826|nucleotide binding protein-like
mm9_v1_chr4_-_128483355_128483429	0.935995	HMX1.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr2_-_33286793_33286890	0.935459	HMX1.p2	NM_001085507|Zbtb34|241311|zinc finger and BTB domain containing 34
mm9_v1_chr11_+_4136787_4136837	0.934716	HMX1.p2	NM_001013365|Osm|18413|oncostatin M	BC099866|Osm|18413|oncostatin M	AK155637|Osm|18413|oncostatin M
mm9_v1_chr15_-_36538691_36538736	0.933692	HMX1.p2	AK152064|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC046233|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159703|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK044829|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160883|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160968|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161671|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK168466|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK089747|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK150839|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159733|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK005009|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK133196|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161123|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	NM_008774|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr11_-_97490456_97490494	0.933381	HMX1.p2	BC006054|E130012A19Rik|103551|RIKEN cDNA E130012A19 gene
mm9_v1_chr7_+_148274044_148274095	0.928827	HMX1.p2	AK154376|Pkp3|56460|plakophilin 3
mm9_v1_chr2_+_49643205_49643207	0.927712	HMX1.p2	NM_027990|Lypd6b|71897|LY6/PLAUR domain containing 6B	AK009282|Lypd6b|71897|LY6/PLAUR domain containing 6B
mm9_v1_chr15_+_102109859_102110015	0.920515	HMX1.p2	AK087550|Mfsd5|106073|major facilitator superfamily domain containing 5	AK089268|Mfsd5|106073|major facilitator superfamily domain containing 5	NM_134100|Mfsd5|106073|major facilitator superfamily domain containing 5	AK165774|Mfsd5|106073|major facilitator superfamily domain containing 5
mm9_v1_chr2_+_166888331_166888433	0.918891	HMX1.p2	NM_001081005|1500012F01Rik|68949|RIKEN cDNA 1500012F01 gene
mm9_v1_chr6_+_128313041_128313108	0.918845	HMX1.p2	AK041638|Foxm1|14235|forkhead box M1	AK049177|Foxm1|14235|forkhead box M1	Y11245|Foxm1|14235|forkhead box M1
mm9_v1_chr11_+_48615302_48615310	0.918428	HMX1.p2	AK166889|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr9_-_31720846_31720869	0.916206	HMX1.p2	BC012684|Barx2|12023|BarH-like homeobox 2	NM_013800|Barx2|12023|BarH-like homeobox 2
mm9_v1_chr17_-_34164996_34165023	0.915562	HMX1.p2	BC086927|H2-Ke6|14979|H2-K region expressed gene 6	NM_013543|H2-Ke6|14979|H2-K region expressed gene 6
mm9_v1_chr7_-_133726668_133726903	0.911981	HMX1.p2	U92811|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U47106|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC060306|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U68064|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	AK078976|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	NM_009907|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC080759|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC058753|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr19_-_17431079_17431156	0.911911	HMX1.p2	BC039126|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK199888|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK045216|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	AK167048|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	D87333|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	NM_173442|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr8_-_42459932_42460052	0.909352	HMX1.p2	AK150567|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK151312|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK152811|Asah1|11886|N-acylsphingosine amidohydrolase 1	BC003204|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK153297|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK075666|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK159556|Asah1|11886|N-acylsphingosine amidohydrolase 1	AF157500|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK166757|Asah1|11886|N-acylsphingosine amidohydrolase 1	AF352179|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK090314|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK075919|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK077721|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK152305|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK152920|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK153101|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK151478|Asah1|11886|N-acylsphingosine amidohydrolase 1	AK151208|Asah1|11886|N-acylsphingosine amidohydrolase 1	NM_019734|Asah1|11886|N-acylsphingosine amidohydrolase 1
mm9_v1_chr17_-_35089399_35089425	0.908167	HMX1.p2	BC058123|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK003073|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK004150|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene	AK002372|1110038B12Rik|68763|RIKEN cDNA 1110038B12 gene
mm9_v1_chr17_+_29628249_29628310	0.908152	HMX1.p2	AK154669|Pim1|18712|proviral integration site 1
mm9_v1_chr1_+_39957733_39957796	0.907726	HMX1.p2	NM_008696|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr12_-_27141303_27141316	0.907625	HMX1.p2	NM_021384|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr11_-_69672218_69672235	0.905255	HMX1.p2	BC029623|Tnk1|83813|tyrosine kinase, non-receptor, 1	AF307746|Tnk1|83813|tyrosine kinase, non-receptor, 1	AK076220|Tnk1|83813|tyrosine kinase, non-receptor, 1	AK167292|Tnk1|83813|tyrosine kinase, non-receptor, 1	NM_031880|Tnk1|83813|tyrosine kinase, non-receptor, 1
mm9_v1_chr17_-_25023253_25023304	0.903265	HMX1.p2	AK169896|Nubp2|26426|nucleotide binding protein 2	AF114169|Nubp2|26426|nucleotide binding protein 2	BC012635|Nubp2|26426|nucleotide binding protein 2	AK003816|Nubp2|26426|nucleotide binding protein 2	NM_011956|Nubp2|26426|nucleotide binding protein 2
mm9_v1_chr8_-_82581887_82581932	0.903022	HMX1.p2	AF116865|Hhip|15245|Hedgehog-interacting protein	BC053012|Hhip|15245|Hedgehog-interacting protein	AK031539|Hhip|15245|Hedgehog-interacting protein	NM_020259|Hhip|15245|Hedgehog-interacting protein
mm9_v1_chr9_-_78328343_78328496	0.901402	HMX1.p2	AK200818|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK194234|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC092292|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC004005|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	X03688|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC003969|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC004067|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC005660|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	BC092276|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	X13661|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr2_-_126444378_126444429	0.898564	HMX1.p2	X57437|Hdc|15186|histidine decarboxylase	BC052833|Hdc|15186|histidine decarboxylase	AK076384|Hdc|15186|histidine decarboxylase	AK150168|Hdc|15186|histidine decarboxylase	AK088545|Hdc|15186|histidine decarboxylase	AK153104|Hdc|15186|histidine decarboxylase	NM_008230|Hdc|15186|histidine decarboxylase	AK133455|Hdc|15186|histidine decarboxylase
mm9_v1_chr13_+_105077914_105078054	0.898449	HMX1.p2	AK030315|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	AK044528|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	NM_001081020|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6	BC172116|Adamts6|108154|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6
mm9_v1_chr11_-_67735654_67735654	0.898064	HMX1.p2	AK042217|Usp43|216835|ubiquitin specific peptidase 43	NM_173754|Usp43|216835|ubiquitin specific peptidase 43
mm9_v1_chr15_-_76307654_76307703	0.897763	HMX1.p2	BC012693|Bop1|12181|block of proliferation 1	AK129058|Bop1|12181|block of proliferation 1	AK012448|Bop1|12181|block of proliferation 1	AK167829|Bop1|12181|block of proliferation 1	AK079627|Bop1|12181|block of proliferation 1	AK168127|Bop1|12181|block of proliferation 1	AK167110|Bop1|12181|block of proliferation 1	AK167225|Bop1|12181|block of proliferation 1	AK167878|Bop1|12181|block of proliferation 1	NM_013481|Bop1|12181|block of proliferation 1	U77415|Bop1|12181|block of proliferation 1	AK144095|Bop1|12181|block of proliferation 1
mm9_v1_chr16_-_18248659_18248687	0.897244	HMX1.p2	L25255|Ranbp1|19385|RAN binding protein 1
mm9_v1_chr14_-_73109722_73109912	0.893527	HMX1.p2	AK089380|Fndc3a|319448|fibronectin type III domain containing 3A	AK032733|Fndc3a|319448|fibronectin type III domain containing 3A	AK164398|Fndc3a|319448|fibronectin type III domain containing 3A	AK048586|Fndc3a|319448|fibronectin type III domain containing 3A	DQ192036|Fndc3a|319448|fibronectin type III domain containing 3A	NM_207636|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr9_-_14916551_14916551	0.890735	HMX1.p2	AK132457|Hephl1|244698|hephaestin-like 1	NM_001164797|Hephl1|244698|hephaestin-like 1
mm9_v1_chr3_+_94146019_94146038	0.889844	HMX1.p2	AK004155|Them5|66198|thioesterase superfamily member 5	NM_025416|Them5|66198|thioesterase superfamily member 5	AK009228|Them5|66198|thioesterase superfamily member 5	BC046437|Them5|66198|thioesterase superfamily member 5
mm9_v1_chr2_-_56976258_56976330	0.883611	HMX1.p2	AB014889|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr10_+_43298969_43299042	0.88241	HMX1.p2	AK014279|Cd24a|12484|CD24a antigen	NM_009846|Cd24a|12484|CD24a antigen	AK133869|Cd24a|12484|CD24a antigen	AK168111|Cd24a|12484|CD24a antigen	AK169613|Cd24a|12484|CD24a antigen	BC026702|Cd24a|12484|CD24a antigen	M58661|Cd24a|12484|CD24a antigen	BC075622|Cd24a|12484|CD24a antigen	X53825|Cd24a|12484|CD24a antigen
mm9_v1_chr6_+_128312987_128313011	0.88083	HMX1.p2	BC075723|Foxm1|14235|forkhead box M1	BC065067|Foxm1|14235|forkhead box M1	NM_008021|Foxm1|14235|forkhead box M1
mm9_v1_chr4_-_133574655_133574730	0.879084	HMX1.p2	AB221669|Lin28a|83557|lin-28 homolog A (C. elegans)	BC068304|Lin28a|83557|lin-28 homolog A (C. elegans)	AF521097|Lin28a|83557|lin-28 homolog A (C. elegans)	NM_145833|Lin28a|83557|lin-28 homolog A (C. elegans)
mm9_v1_chr10_-_21868620_21868648	0.878499	HMX1.p2	AK045260|E030030I06Rik|319887|RIKEN cDNA E030030I06 gene	AK053193|E030030I06Rik|319887|RIKEN cDNA E030030I06 gene
mm9_v1_chr18_+_32996878_32997001	0.878254	HMX1.p2	AK156822|Wdr36|225348|WD repeat domain 36	NM_001110015|Wdr36|225348|WD repeat domain 36	NM_001110016|Wdr36|225348|WD repeat domain 36	NM_144863|Wdr36|225348|WD repeat domain 36	AK045396|Wdr36|225348|WD repeat domain 36	BC022132|Wdr36|225348|WD repeat domain 36	BC094453|Wdr36|225348|WD repeat domain 36	AK171683|Wdr36|225348|WD repeat domain 36	AK077545|Wdr36|225348|WD repeat domain 36	AK172377|Wdr36|225348|WD repeat domain 36	AK140019|Wdr36|225348|WD repeat domain 36	AK172054|Wdr36|225348|WD repeat domain 36	AK041763|Wdr36|225348|WD repeat domain 36	BC025809|Wdr36|225348|WD repeat domain 36	AK155965|Wdr36|225348|WD repeat domain 36
mm9_v1_chr7_-_87543749_87543798	0.875155	HMX1.p2	X54056|Furin|18550|furin (paired basic amino acid cleaving enzyme)	BC048234|Furin|18550|furin (paired basic amino acid cleaving enzyme)
mm9_v1_chr7_-_127288785_127288804	0.871845	HMX1.p2	BC071183|Zp2|22787|zona pellucida glycoprotein 2	AK135903|Zp2|22787|zona pellucida glycoprotein 2	M34148|Zp2|22787|zona pellucida glycoprotein 2	NM_011775|Zp2|22787|zona pellucida glycoprotein 2	AK138699|Zp2|22787|zona pellucida glycoprotein 2
mm9_v1_chr10_+_7445867_7445883	0.867492	HMX1.p2	BC009136|Katna1|23924|katanin p60 (ATPase-containing) subunit A1
mm9_v1_chr7_+_29237141_29237256	0.865579	HMX1.p2	AK090175|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1	AK144493|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1	NM_001141921|Lrfn1|80749|leucine rich repeat and fibronectin type III domain containing 1
mm9_v1_chr8_-_129469539_129469702	0.863672	HMX1.p2	AK181461|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)	AK185977|Tomm20|67952|translocase of outer mitochondrial membrane 20 homolog (yeast)
mm9_v1_chr13_+_32894489_32894508	0.86361	HMX1.p2	BC058744|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr11_-_73012493_73012562	0.863584	HMX1.p2	BC005479|Ctns|83429|cystinosis, nephropathic	BC006033|Ctns|83429|cystinosis, nephropathic	AK079295|Ctns|83429|cystinosis, nephropathic	AK137143|Ctns|83429|cystinosis, nephropathic	NM_031251|Ctns|83429|cystinosis, nephropathic	AK078511|Ctns|83429|cystinosis, nephropathic	AK170790|Ctns|83429|cystinosis, nephropathic	AK054467|Ctns|83429|cystinosis, nephropathic	AK085517|Ctns|83429|cystinosis, nephropathic	AK170828|Ctns|83429|cystinosis, nephropathic
mm9_v1_chr15_-_101723333_101723350	0.861463	HMX1.p2	AK009075|Krt76|77055|keratin 76	AK036802|Krt76|77055|keratin 76	AK137676|Krt76|77055|keratin 76	NM_001033177|Krt76|77055|keratin 76
mm9_v1_chr14_+_8930682_8930828	0.859288	HMX1.p2	AK150660|Pxk|218699|PX domain containing serine/threonine kinase	AK147037|Pxk|218699|PX domain containing serine/threonine kinase	AK172463|Pxk|218699|PX domain containing serine/threonine kinase	NM_145458|Pxk|218699|PX domain containing serine/threonine kinase	NM_178279|Pxk|218699|PX domain containing serine/threonine kinase	AK170361|Pxk|218699|PX domain containing serine/threonine kinase	AK157364|Pxk|218699|PX domain containing serine/threonine kinase	AK150337|Pxk|218699|PX domain containing serine/threonine kinase	AK150413|Pxk|218699|PX domain containing serine/threonine kinase	BC016131|Pxk|218699|PX domain containing serine/threonine kinase	AK156146|Pxk|218699|PX domain containing serine/threonine kinase	AK169565|Pxk|218699|PX domain containing serine/threonine kinase	AK048910|Pxk|218699|PX domain containing serine/threonine kinase	AK151098|Pxk|218699|PX domain containing serine/threonine kinase	AK152058|Pxk|218699|PX domain containing serine/threonine kinase	AK152789|Pxk|218699|PX domain containing serine/threonine kinase	AK153067|Pxk|218699|PX domain containing serine/threonine kinase	AK169112|Pxk|218699|PX domain containing serine/threonine kinase	AK028501|Pxk|218699|PX domain containing serine/threonine kinase	AK172347|Pxk|218699|PX domain containing serine/threonine kinase	AK166036|Pxk|218699|PX domain containing serine/threonine kinase	DQ095196|Pxk|218699|PX domain containing serine/threonine kinase	DQ095197|Pxk|218699|PX domain containing serine/threonine kinase
mm9_v1_chr11_+_100939724_100939776	0.858828	HMX1.p2	NM_010475|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	X89627|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	BC125657|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	BC125659|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1	AK143346|Hsd17b1|15485|hydroxysteroid (17-beta) dehydrogenase 1
mm9_v1_chr11_+_97524725_97524725	0.857676	HMX1.p2	NM_139311|Mllt6|246198|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm9_v1_chrX_+_34666757_34666828	0.853269	HMX1.p2	NM_025937|Nkap|67050|NFKB activating protein	BC026774|Nkap|67050|NFKB activating protein	AK011492|Nkap|67050|NFKB activating protein	AY388959|Nkap|67050|NFKB activating protein	AK038344|Nkap|67050|NFKB activating protein	AK076125|Nkap|67050|NFKB activating protein	AK012826|Nkap|67050|NFKB activating protein	AK089943|Nkap|67050|NFKB activating protein
mm9_v1_chr4_+_135412028_135412060	0.851711	HMX1.p2	AK161097|Srsf10|14105|serine/arginine-rich splicing factor 10	AK168524|Srsf10|14105|serine/arginine-rich splicing factor 10	AK168558|Srsf10|14105|serine/arginine-rich splicing factor 10	AK135316|Srsf10|14105|serine/arginine-rich splicing factor 10	AK005295|Srsf10|14105|serine/arginine-rich splicing factor 10	BC006670|Srsf10|14105|serine/arginine-rich splicing factor 10	AK014345|Srsf10|14105|serine/arginine-rich splicing factor 10	AK151567|Srsf10|14105|serine/arginine-rich splicing factor 10	AF060490|Srsf10|14105|serine/arginine-rich splicing factor 10	AK150734|Srsf10|14105|serine/arginine-rich splicing factor 10	AK149716|Srsf10|14105|serine/arginine-rich splicing factor 10	AK150072|Srsf10|14105|serine/arginine-rich splicing factor 10
mm9_v1_chr14_-_57430243_57430300	0.851707	HMX1.p2	AK156501|Zmym5|219105|zinc finger, MYM-type 5
mm9_v1_chr7_-_125999511_125999511	0.851102	HMX1.p2	AK006113|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	NM_001168218|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	NM_001168219|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	NM_023197|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene
mm9_v1_chr4_-_133158082_133158082	0.850891	HMX1.p2	NM_018754|Sfn|55948|stratifin
mm9_v1_chr11_+_9018622_9018639	0.85024	HMX1.p2	AK136474|Upp1|22271|uridine phosphorylase 1
mm9_v1_chr3_+_144955435_144955435	0.846338	HMX1.p2	DQ157748|Col24a1|71355|collagen, type XXIV, alpha 1	NM_027770|Col24a1|71355|collagen, type XXIV, alpha 1
mm9_v1_chr7_+_144629288_144629354	0.846221	HMX1.p2	AK167672|Glrx3|30926|glutaredoxin 3	AK010354|Glrx3|30926|glutaredoxin 3	AK017371|Glrx3|30926|glutaredoxin 3	NM_023140|Glrx3|30926|glutaredoxin 3	AF118650|Glrx3|30926|glutaredoxin 3	AK051468|Glrx3|30926|glutaredoxin 3	BC087885|Glrx3|30926|glutaredoxin 3	AK152446|Glrx3|30926|glutaredoxin 3	AK152634|Glrx3|30926|glutaredoxin 3	AK155190|Glrx3|30926|glutaredoxin 3	BC033506|Glrx3|30926|glutaredoxin 3	AK147158|Glrx3|30926|glutaredoxin 3
mm9_v1_chr4_+_120339167_120339220	0.844429	HMX1.p2	NM_019563|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK012136|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK154030|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC025116|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC080723|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AF143369|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132360|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132362|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4
mm9_v1_chr7_-_125386862_125387193	0.844137	HMX1.p2	AK220328|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK041264|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK047829|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK157798|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	AK049391|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	NM_001031814|Smg1|233789|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
mm9_v1_chr6_+_117867280_117867570	0.84292	HMX1.p2	NM_001166427|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK076478|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC018185|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	BC089313|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK188037|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	AK196656|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr15_-_82742536_82742563	0.84238	HMX1.p2	BC138038|Tcf20|21411|transcription factor 20	BC171946|Tcf20|21411|transcription factor 20	AY007594|Tcf20|21411|transcription factor 20	NM_001114140|Tcf20|21411|transcription factor 20	NM_013836|Tcf20|21411|transcription factor 20
mm9_v1_chr13_+_12658130_12658343	0.841955	HMX1.p2	AK160664|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC058721|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	NM_026184|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AK004981|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AK041951|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC111900|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC112426|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC145888|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	BC145890|Ero1lb|67475|ERO1-like beta (S. cerevisiae)	AF489856|Ero1lb|67475|ERO1-like beta (S. cerevisiae)
mm9_v1_chr11_+_95275392_95275501	0.841245	HMX1.p2	NM_025287|Spop|20747|speckle-type POZ protein	AK168546|Spop|20747|speckle-type POZ protein	AK030746|Spop|20747|speckle-type POZ protein	AK132383|Spop|20747|speckle-type POZ protein	BC045205|Spop|20747|speckle-type POZ protein	AK004669|Spop|20747|speckle-type POZ protein	AK159482|Spop|20747|speckle-type POZ protein	AK028201|Spop|20747|speckle-type POZ protein	BC064809|Spop|20747|speckle-type POZ protein	AK168185|Spop|20747|speckle-type POZ protein	AK166581|Spop|20747|speckle-type POZ protein	AK160858|Spop|20747|speckle-type POZ protein
mm9_v1_chrX_-_71167183_71167282	0.840344	HMX1.p2	BC027219|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK009697|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK014469|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK003806|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AK078700|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AY183136|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	AY183137|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	NM_001177965|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10	NM_019870|Naa10|56292|N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10
mm9_v1_chr1_+_173300229_173300303	0.839386	HMX1.p2	AK154983|Pvrl4|71740|poliovirus receptor-related 4	NM_001122680|Pvrl4|71740|poliovirus receptor-related 4	NM_027893|Pvrl4|71740|poliovirus receptor-related 4
mm9_v1_chr7_+_16335718_16335725	0.838671	HMX1.p2	NM_145709|Obox5|252829|oocyte specific homeobox 5	BC052664|Obox5|252829|oocyte specific homeobox 5
mm9_v1_chr7_+_52436364_52436364	0.837525	HMX1.p2	AY048587|Pth2|114640|parathyroid hormone 2	NM_053256|Pth2|114640|parathyroid hormone 2
mm9_v1_chr17_-_57150708_57150759	0.836494	HMX1.p2	BC003336|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	BC023081|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	NM_133801|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168236|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK168243|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK013002|Gtf2f1|98053|general transcription factor IIF, polypeptide 1	AK078048|Gtf2f1|98053|general transcription factor IIF, polypeptide 1
mm9_v1_chr6_+_142723841_142723893	0.834106	HMX1.p2	AK213220|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase
mm9_v1_chr11_+_3189157_3189283	0.833383	HMX1.p2	AK018372|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC055947|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr4_-_82505534_82505564	0.831332	HMX1.p2	NM_026647|Zdhhc21|68268|zinc finger, DHHC domain containing 21
mm9_v1_chr4_-_77857753_77857864	0.828798	HMX1.p2	AK083789|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AK045658|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AK034145|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	AK080973|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr8_+_15011024_15011024	0.825749	HMX1.p2	AK013531|Kbtbd11|74901|kelch repeat and BTB (POZ) domain containing 11	NM_029116|Kbtbd11|74901|kelch repeat and BTB (POZ) domain containing 11
mm9_v1_chr6_+_83004642_83004658	0.82402	HMX1.p2	AK154707|Aup1|11993|ancient ubiquitous protein 1	NM_007517|Aup1|11993|ancient ubiquitous protein 1
mm9_v1_chr3_-_92289795_92289819	0.822953	HMX1.p2	X91824|Sprr1a|20753|small proline-rich protein 1A	BC027534|Sprr1a|20753|small proline-rich protein 1A	NM_009264|Sprr1a|20753|small proline-rich protein 1A	AK144782|Sprr1a|20753|small proline-rich protein 1A
mm9_v1_chr4_+_135412062_135412110	0.821292	HMX1.p2	AK168571|Srsf10|14105|serine/arginine-rich splicing factor 10	AF042383|Srsf10|14105|serine/arginine-rich splicing factor 10	BC083082|Srsf10|14105|serine/arginine-rich splicing factor 10	AB015894|Srsf10|14105|serine/arginine-rich splicing factor 10	AB015895|Srsf10|14105|serine/arginine-rich splicing factor 10	BC037591|Srsf10|14105|serine/arginine-rich splicing factor 10
mm9_v1_chr14_+_55244146_55244163	0.820879	HMX1.p2	AK162727|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11	NM_175204|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11	AK017902|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11	AK037368|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11	AK041393|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11	BC117732|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11	BC117733|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11	AB299436|Psmb11|73902|proteasome (prosome, macropain) subunit, beta type, 11
mm9_v1_chr3_-_100293092_100293154	0.819148	HMX1.p2	BC037072|Fam46c|74645|family with sequence similarity 46, member C	BC120717|Fam46c|74645|family with sequence similarity 46, member C	BC120719|Fam46c|74645|family with sequence similarity 46, member C	BC046309|Fam46c|74645|family with sequence similarity 46, member C	NM_001142952|Fam46c|74645|family with sequence similarity 46, member C
mm9_v1_chr15_+_79177959_79178004	0.817397	HMX1.p2	AK156896|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr15_-_86044710_86044826	0.815606	HMX1.p2	AK012625|2810001A02Rik|72146|RIKEN cDNA 2810001A02 gene
mm9_v1_chr15_+_79722811_79722966	0.814445	HMX1.p2	AK154035|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	NM_001160415|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	NM_030255|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	BC003314|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK049256|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK044394|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK049998|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AK153719|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461446|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461447|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461448|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	AB461449|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707568|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707570|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	GQ871501|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707569|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3	EU707571|Apobec3|80287|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm9_v1_chr5_-_108416027_108416163	0.81235	HMX1.p2	BC055842|Fam69a|67266|family with sequence similarity 69, member A	BC095935|Fam69a|67266|family with sequence similarity 69, member A	AK008504|Fam69a|67266|family with sequence similarity 69, member A	BC116683|Fam69a|67266|family with sequence similarity 69, member A	AK153488|Fam69a|67266|family with sequence similarity 69, member A	BC061013|Fam69a|67266|family with sequence similarity 69, member A	AK038811|Fam69a|67266|family with sequence similarity 69, member A	AK048979|Fam69a|67266|family with sequence similarity 69, member A	AK050305|Fam69a|67266|family with sequence similarity 69, member A	AK013580|Fam69a|67266|family with sequence similarity 69, member A	NM_026062|Fam69a|67266|family with sequence similarity 69, member A
mm9_v1_chr1_+_74283381_74283464	0.81215	HMX1.p2	AK083263|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr6_-_5248235_5248333	0.810556	HMX1.p2	BC037140|Pon2|330260|paraoxonase 2	L48514|Pon2|330260|paraoxonase 2	AK152351|Pon2|330260|paraoxonase 2	AK171926|Pon2|330260|paraoxonase 2	BC021887|Pon2|330260|paraoxonase 2
mm9_v1_chr9_+_45820886_45820906	0.808383	HMX1.p2	NM_027498|Sik3|70661|SIK family kinase 3
mm9_v1_chr4_-_133157683_133157747	0.808288	HMX1.p2	AF152893|Sfn|55948|stratifin	AK169358|Sfn|55948|stratifin
mm9_v1_chr15_+_81575277_81575277	0.808094	HMX1.p2	NM_001081016|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr17_-_89599951_89600014	0.806228	HMX1.p2	AF095642|Fshr|14309|follicle stimulating hormone receptor	BC137990|Fshr|14309|follicle stimulating hormone receptor	BC137991|Fshr|14309|follicle stimulating hormone receptor	AK016635|Fshr|14309|follicle stimulating hormone receptor	NM_013523|Fshr|14309|follicle stimulating hormone receptor
mm9_v1_chr13_-_104710374_104710739	0.80512	HMX1.p2	BC141178|Erbb2ip|59079|Erbb2 interacting protein	BC141188|Erbb2ip|59079|Erbb2 interacting protein	BC145498|Erbb2ip|59079|Erbb2 interacting protein	BC145509|Erbb2ip|59079|Erbb2 interacting protein	AK169529|Erbb2ip|59079|Erbb2 interacting protein	NM_001005868|Erbb2ip|59079|Erbb2 interacting protein	NM_021563|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr10_+_97155692_97155767	0.803889	HMX1.p2	AK006212|4921510H08Rik|66716|RIKEN cDNA 4921510H08 gene	AK014860|4921510H08Rik|66716|RIKEN cDNA 4921510H08 gene	NM_025724|4921510H08Rik|66716|RIKEN cDNA 4921510H08 gene	BC120881|4921510H08Rik|66716|RIKEN cDNA 4921510H08 gene	BC120882|4921510H08Rik|66716|RIKEN cDNA 4921510H08 gene
mm9_v1_chr4_+_129497951_129498025	0.802784	HMX1.p2	NM_001164745|Ptp4a2|19244|protein tyrosine phosphatase 4a2	AK018045|5830469G19Rik|76093|RIKEN cDNA 5830469G19 gene
mm9_v1_chr19_+_9022763_9022826	0.799225	HMX1.p2	AK003701|Mta2|23942|metastasis-associated gene family, member 2	AK186547|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr11_+_45869473_45869501	0.796465	HMX1.p2	NM_009616|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC093480|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr8_+_108424267_108424373	0.796304	HMX1.p2	AK153861|Pskh1|244631|protein serine kinase H1	AK053397|Pskh1|244631|protein serine kinase H1	AK154570|Pskh1|244631|protein serine kinase H1	AK166338|Pskh1|244631|protein serine kinase H1	BC050128|Pskh1|244631|protein serine kinase H1	NM_173432|Pskh1|244631|protein serine kinase H1
mm9_v1_chr2_-_5635547_5635807	0.796178	HMX1.p2	AK053173|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170123|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK170777|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	NM_177343|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK147616|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr12_+_3426883_3427022	0.794394	HMX1.p2	AK080679|Asxl2|75302|additional sex combs like 2 (Drosophila)	NM_172421|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK036839|Asxl2|75302|additional sex combs like 2 (Drosophila)	AK142135|Asxl2|75302|additional sex combs like 2 (Drosophila)	BC141140|Asxl2|75302|additional sex combs like 2 (Drosophila)
mm9_v1_chr1_-_88567078_88567149	0.791722	HMX1.p2	BC111834|Nppc|18159|natriuretic peptide type C	AK036176|Nppc|18159|natriuretic peptide type C	NM_010933|Nppc|18159|natriuretic peptide type C	AK020093|Nppc|18159|natriuretic peptide type C
mm9_v1_chr2_+_13496013_13496289	0.791079	HMX1.p2	M24849|Vim|22352|vimentin	BC134386|Vim|22352|vimentin	AK217953|Vim|22352|vimentin	AK208041|Vim|22352|vimentin	AK033175|Vim|22352|vimentin	AK150270|Vim|22352|vimentin
mm9_v1_chr4_-_133157755_133157762	0.790129	HMX1.p2	AK146490|Sfn|55948|stratifin
mm9_v1_chr17_+_23797470_23797489	0.788852	HMX1.p2	AK133729|Ccdc64b|212733|coiled-coil domain containing 64B	AK036793|Ccdc64b|212733|coiled-coil domain containing 64B	BC038613|Ccdc64b|212733|coiled-coil domain containing 64B	NM_153784|Ccdc64b|212733|coiled-coil domain containing 64B
mm9_v1_chr11_+_96160484_96160526	0.78746	HMX1.p2	BC016893|Hoxb6|15414|homeobox B6	NM_008269|Hoxb6|15414|homeobox B6
mm9_v1_chr9_+_30838224_30838249	0.7853	HMX1.p2	AK036895|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_001115130|Zbtb44|235132|zinc finger and BTB domain containing 44	NM_172765|Zbtb44|235132|zinc finger and BTB domain containing 44
mm9_v1_chr2_-_131970786_131970867	0.784755	HMX1.p2	AY004874|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK087175|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	AK169991|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2	NM_018824|Slc23a2|54338|solute carrier family 23 (nucleobase transporters), member 2
mm9_v1_chr1_-_88008483_88008544	0.78357	HMX1.p2	BC023690|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	AK033713|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	NM_008311|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B
mm9_v1_chr11_+_70783966_70784013	0.782697	HMX1.p2	AK010289|Rpain|69723|RPA interacting protein	DQ810267|Rpain|69723|RPA interacting protein	DQ810268|Rpain|69723|RPA interacting protein	DQ810269|Rpain|69723|RPA interacting protein	DQ810270|Rpain|69723|RPA interacting protein	DQ810271|Rpain|69723|RPA interacting protein	DQ810272|Rpain|69723|RPA interacting protein
mm9_v1_chr7_+_134628622_134628734	0.781419	HMX1.p2	NM_010183|Fbrs|14123|fibrosin
mm9_v1_chr17_+_34442837_34442976	0.781041	HMX1.p2	AK155968|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52642|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132165|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132163|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	AK160485|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52641|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X07239|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36940|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90032|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28489|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28490|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36939|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90275|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X00958|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M28408|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr6_-_128312829_128312952	0.779903	HMX1.p2	AK156717|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	BC027368|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK146167|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK168313|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene
mm9_v1_chr2_-_154198449_154198468	0.777404	HMX1.p2	AK010081|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK010097|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	NM_025876|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK088517|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK136570|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr7_-_53965879_53966065	0.777187	HMX1.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr14_+_55305607_55305889	0.776082	HMX1.p2	AK007261|1700123O20Rik|58248|RIKEN cDNA 1700123O20 gene	AK170890|1700123O20Rik|58248|RIKEN cDNA 1700123O20 gene	AK167989|1700123O20Rik|58248|RIKEN cDNA 1700123O20 gene	BC011283|1700123O20Rik|58248|RIKEN cDNA 1700123O20 gene
mm9_v1_chr11_-_33047217_33047399	0.775399	HMX1.p2	AK078245|Fgf18|14172|fibroblast growth factor 18	AB004639|Fgf18|14172|fibroblast growth factor 18	AF211187|Fgf18|14172|fibroblast growth factor 18	AF075291|Fgf18|14172|fibroblast growth factor 18	NM_008005|Fgf18|14172|fibroblast growth factor 18
mm9_v1_chr7_-_121261292_121261300	0.770629	HMX1.p2	AK011419|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK078870|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	NM_025846|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2
mm9_v1_chr5_-_66542161_66542216	0.768285	HMX1.p2	AK035620|Rbm47|245945|RNA binding motif protein 47	AK142584|Rbm47|245945|RNA binding motif protein 47	AK085733|Rbm47|245945|RNA binding motif protein 47	NM_178446|Rbm47|245945|RNA binding motif protein 47	BC112902|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr8_-_120325812_120325903	0.765959	HMX1.p2	BC008161|Mphosph6|68533|M phase phosphoprotein 6	AK003245|Mphosph6|68533|M phase phosphoprotein 6	NM_026758|Mphosph6|68533|M phase phosphoprotein 6
mm9_v1_chr19_-_14672472_14672537	0.764758	HMX1.p2	AK017548|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)	NM_011600|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr7_+_19511230_19511244	0.764594	HMX1.p2	NM_001029877|Nova2|384569|neuro-oncological ventral antigen 2
mm9_v1_chr1_+_40738476_40738556	0.762278	HMX1.p2	BC103685|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC104737|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	BC105676|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2	NM_001033289|Slc9a2|226999|solute carrier family 9 (sodium/hydrogen exchanger), member 2
mm9_v1_chr16_-_11203350_11203433	0.762043	HMX1.p2	AK136025|Rsl1d1|66409|ribosomal L1 domain containing 1	BC034355|Rsl1d1|66409|ribosomal L1 domain containing 1	AK162241|Rsl1d1|66409|ribosomal L1 domain containing 1	BC069934|Rsl1d1|66409|ribosomal L1 domain containing 1	AK166479|Rsl1d1|66409|ribosomal L1 domain containing 1	AK171805|Rsl1d1|66409|ribosomal L1 domain containing 1	AK168717|Rsl1d1|66409|ribosomal L1 domain containing 1	AK012937|Rsl1d1|66409|ribosomal L1 domain containing 1	AK166579|Rsl1d1|66409|ribosomal L1 domain containing 1	AK168469|Rsl1d1|66409|ribosomal L1 domain containing 1	AK075933|Rsl1d1|66409|ribosomal L1 domain containing 1	NM_025546|Rsl1d1|66409|ribosomal L1 domain containing 1	AK165572|Rsl1d1|66409|ribosomal L1 domain containing 1	DQ445383|Rsl1d1|66409|ribosomal L1 domain containing 1	AK145699|Rsl1d1|66409|ribosomal L1 domain containing 1
mm9_v1_chr11_+_76220643_76220715	0.760025	HMX1.p2	NM_019818|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	NM_023355|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	BC055279|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK011745|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK012130|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK017389|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK028132|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AK153837|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	AF223950|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)	BC022610|Timm22|56322|translocase of inner mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr5_+_115303672_115303722	0.756652	HMX1.p2	AK015857|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene	AK015843|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene	NM_026263|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene
mm9_v1_chr11_-_116704762_116704824	0.756389	HMX1.p2	BC056629|Jmjd6|107817|jumonji domain containing 6	EF527404|Jmjd6|107817|jumonji domain containing 6	NM_033398|Jmjd6|107817|jumonji domain containing 6
mm9_v1_chr2_+_13501725_13501846	0.756305	HMX1.p2	AK205443|Vim|22352|vimentin
mm9_v1_chr5_-_135096084_135096090	0.755002	HMX1.p2	
mm9_v1_chr5_+_75971011_75971052	0.75282	HMX1.p2	NM_001122733|Kit|16590|kit oncogene	NM_021099|Kit|16590|kit oncogene	AK046795|Kit|16590|kit oncogene	AK047010|Kit|16590|kit oncogene	BC026713|Kit|16590|kit oncogene	BC075716|Kit|16590|kit oncogene	BC052457|Kit|16590|kit oncogene	Y00864|Kit|16590|kit oncogene	AY536430|Kit|16590|kit oncogene	AY536431|Kit|16590|kit oncogene
mm9_v1_chr13_+_36060639_36060716	0.752814	HMX1.p2	AK005570|Ppp1r3g|76487|protein phosphatase 1, regulatory (inhibitor) subunit 3G
mm9_v1_chrX_-_133314259_133314259	0.752652	HMX1.p2	DQ109809|Glra4|14657|glycine receptor, alpha 4 subunit	NM_010297|Glra4|14657|glycine receptor, alpha 4 subunit
mm9_v1_chr2_+_34965011_34965138	0.752608	HMX1.p2	AK041715|Cep110|26920|centrosomal protein 110	NM_012018|Cep110|26920|centrosomal protein 110	AK031338|Cep110|26920|centrosomal protein 110	AK020148|Cep110|26920|centrosomal protein 110	BC038386|Cep110|26920|centrosomal protein 110	BC158010|Cep110|26920|centrosomal protein 110
mm9_v1_chr7_-_3849680_3849726	0.751287	HMX1.p2	U96686|Pira5|18728|paired-Ig-like receptor A5	AF055896|Pira11|18724|paired-Ig-like receptor A11	AF041036|Pira11|18724|paired-Ig-like receptor A11	BC150155|Pira11|18724|paired-Ig-like receptor A11	NM_001166672|Gm14548|100038909|predicted gene 14548	NM_011091|Pira4|18727|paired-Ig-like receptor A4	U96685|Pira4|18727|paired-Ig-like receptor A4	BC103528|Pira11|18724|paired-Ig-like receptor A11	BC103529|Pira11|18724|paired-Ig-like receptor A11	BC139803|Pira11|18724|paired-Ig-like receptor A11	NM_011088|Pira11|18724|paired-Ig-like receptor A11	AK165650|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011094|Pira7|18730|paired-Ig-like receptor A7	U96688|Pira7|18730|paired-Ig-like receptor A7	BC150712|Pira11|18724|paired-Ig-like receptor A11
mm9_v1_chr7_+_26067559_26067828	0.750443	HMX1.p2	AF363690|Cic|71722|capicua homolog (Drosophila)
mm9_v1_chr7_-_72017803_72017939	0.750331	HMX1.p2	AF319979|Ndnl2|66647|necdin-like 2	BC034892|Ndnl2|66647|necdin-like 2	AK131157|Ndnl2|66647|necdin-like 2	AK010294|Ndnl2|66647|necdin-like 2	AK018250|Ndnl2|66647|necdin-like 2	BC092289|Ndnl2|66647|necdin-like 2	AK049759|Ndnl2|66647|necdin-like 2	AK076471|Ndnl2|66647|necdin-like 2	AK017727|Ndnl2|66647|necdin-like 2	NM_023239|Ndnl2|66647|necdin-like 2
mm9_v1_chr3_+_89234758_89234758	0.74899	HMX1.p2	AK132759|Pygo2|68911|pygopus 2	NM_026869|Pygo2|68911|pygopus 2
mm9_v1_chr4_-_149356331_149356331	0.748321	HMX1.p2	AK169086|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm9_v1_chr17_-_24833089_24833122	0.747119	HMX1.p2	BC023941|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	AK146579|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	NM_023040|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)
mm9_v1_chr16_-_5256000_5256054	0.747017	HMX1.p2	AK198006|Fam86|70511|family with sequence similarity 86	BC039631|Fam86|70511|family with sequence similarity 86	BC051078|Fam86|70511|family with sequence similarity 86	AK017533|Fam86|70511|family with sequence similarity 86	AK133590|Fam86|70511|family with sequence similarity 86	NM_027446|Fam86|70511|family with sequence similarity 86	AK163493|Fam86|70511|family with sequence similarity 86
mm9_v1_chr2_-_26062008_26062075	0.746348	HMX1.p2	BC132554|Lhx3|16871|LIM homeobox protein 3	BC132556|Lhx3|16871|LIM homeobox protein 3	L38248|Lhx3|16871|LIM homeobox protein 3	NM_001039653|Lhx3|16871|LIM homeobox protein 3
mm9_v1_chr5_+_35399712_35399732	0.744648	HMX1.p2	AK044445|Dok7|231134|docking protein 7	NM_172708|Dok7|231134|docking protein 7
mm9_v1_chr11_+_44332426_44332513	0.74375	HMX1.p2	AK014408|Rnf145|74315|ring finger protein 145	NM_028862|Rnf145|74315|ring finger protein 145	AK043002|Rnf145|74315|ring finger protein 145
mm9_v1_chr14_+_70167372_70167466	0.74295	HMX1.p2	AF176833|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr18_+_24148132_24148185	0.742854	HMX1.p2	AK132703|Zfp35|22694|zinc finger protein 35	NM_011755|Zfp35|22694|zinc finger protein 35	AK159080|Zfp35|22694|zinc finger protein 35	X17617|Zfp35|22694|zinc finger protein 35
mm9_v1_chr6_-_23198140_23198361	0.742621	HMX1.p2	AK014242|Fezf1|73191|Fez family zinc finger 1	BC119565|Fezf1|73191|Fez family zinc finger 1	BC119566|Fezf1|73191|Fez family zinc finger 1	NM_028462|Fezf1|73191|Fez family zinc finger 1	BC049157|Fezf1|73191|Fez family zinc finger 1
mm9_v1_chr4_+_130500298_130500338	0.741595	HMX1.p2	AK014342|Matn1|17180|matrilin 1, cartilage matrix protein	NM_010769|Matn1|17180|matrilin 1, cartilage matrix protein	BC047140|Matn1|17180|matrilin 1, cartilage matrix protein	U35035|Matn1|17180|matrilin 1, cartilage matrix protein
mm9_v1_chr19_+_16510156_16510251	0.74154	HMX1.p2	NM_008137|Gna14|14675|guanine nucleotide binding protein, alpha 14	AK085444|Gna14|14675|guanine nucleotide binding protein, alpha 14
mm9_v1_chr3_-_51144470_51144612	0.740363	HMX1.p2	AK160118|Elf2|69257|E74-like factor 2	AK139199|Elf2|69257|E74-like factor 2	BC069901|Elf2|69257|E74-like factor 2	AK146819|Elf2|69257|E74-like factor 2
mm9_v1_chr7_+_108496574_108496658	0.739312	HMX1.p2	AK172210|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	NM_001040111|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK137455|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	AK140646|Arap1|69710|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm9_v1_chr11_-_53448203_53448203	0.738655	HMX1.p2	M23504|Il13|16163|interleukin 13	NM_008355|Il13|16163|interleukin 13
mm9_v1_chr5_+_140895245_140895309	0.738589	HMX1.p2	AK033722|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	AK170938|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	NM_133916|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	AK167618|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	AK089978|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	BC031704|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	BC023767|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B	BC051065|Eif3b|27979|eukaryotic translation initiation factor 3, subunit B
mm9_v1_chr7_-_73533163_73533231	0.736416	HMX1.p2	BC072664|Lrrk1|233328|leucine-rich repeat kinase 1	AK171849|Lrrk1|233328|leucine-rich repeat kinase 1	AK086795|Lrrk1|233328|leucine-rich repeat kinase 1	AK147469|Lrrk1|233328|leucine-rich repeat kinase 1	AK051264|Lrrk1|233328|leucine-rich repeat kinase 1	NM_146191|Lrrk1|233328|leucine-rich repeat kinase 1
mm9_v1_chr1_+_4847774_4847928	0.733836	HMX1.p2	NM_001159750|Tcea1|21399|transcription elongation factor A (SII) 1	NM_011541|Tcea1|21399|transcription elongation factor A (SII) 1	AK136035|Tcea1|21399|transcription elongation factor A (SII) 1	BC061490|Tcea1|21399|transcription elongation factor A (SII) 1	BC006022|Tcea1|21399|transcription elongation factor A (SII) 1	BC083127|Tcea1|21399|transcription elongation factor A (SII) 1	AK143593|Tcea1|21399|transcription elongation factor A (SII) 1
mm9_v1_chr11_+_23978110_23978267	0.733299	HMX1.p2	AK140949|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF051525|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169036|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF169037|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK122557|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AF186018|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK004395|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	AK043677|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)	BC051418|Bcl11a|14025|B-cell CLL/lymphoma 11A (zinc finger protein)
mm9_v1_chr14_-_48038081_48038081	0.73299	HMX1.p2	AB076696|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	NM_001145949|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	NM_144553|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr5_-_137041588_137041697	0.731894	HMX1.p2	AB041595|Cux1|13047|cut-like homeobox 1
mm9_v1_chr2_+_91366966_91366992	0.731232	HMX1.p2	AK014169|Ckap5|75786|cytoskeleton associated protein 5
mm9_v1_chr11_+_96160268_96160437	0.730338	HMX1.p2	X56459|Hoxb6|15414|homeobox B6	AK011622|Hoxb6|15414|homeobox B6
mm9_v1_chr4_-_128925666_128925738	0.729162	HMX1.p2	AK154932|C77080|97130|expressed sequence C77080	NM_001033189|C77080|97130|expressed sequence C77080
mm9_v1_chr11_-_29447745_29447783	0.724457	HMX1.p2	BC081446|Rps27a|78294|ribosomal protein S27A	BC096392|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr17_-_33961403_33961506	0.723364	HMX1.p2	U11248|Rps28|54127|ribosomal protein S28	BC010987|Rps28|54127|ribosomal protein S28	AK002919|Rps28|54127|ribosomal protein S28	BC090982|Rps28|54127|ribosomal protein S28	NM_016844|Rps28|54127|ribosomal protein S28	BC125644|Rps28|54127|ribosomal protein S28	BC125646|Rps28|54127|ribosomal protein S28
mm9_v1_chr14_-_71166340_71166465	0.720689	HMX1.p2	AJ297360|Xpo7|65246|exportin 7	AK041768|Xpo7|65246|exportin 7	AK051105|Xpo7|65246|exportin 7	AK035775|Xpo7|65246|exportin 7	BC029702|Xpo7|65246|exportin 7	AK164595|Xpo7|65246|exportin 7	NM_023045|Xpo7|65246|exportin 7
mm9_v1_chr2_-_33226980_33226997	0.719932	HMX1.p2	AK129123|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1	AK017939|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1	AK076767|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1	NM_175211|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1
mm9_v1_chr3_-_127201918_127201952	0.719294	HMX1.p2	AK036570|Ank2|109676|ankyrin 2, brain
mm9_v1_chr3_+_95733163_95733182	0.719074	HMX1.p2	AK172146|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	NM_023210|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr4_-_132768403_132768450	0.718283	HMX1.p2	AK140464|Gpr3|14748|G-protein coupled receptor 3	AK158917|Gpr3|14748|G-protein coupled receptor 3	AK140302|Gpr3|14748|G-protein coupled receptor 3	NM_008154|Gpr3|14748|G-protein coupled receptor 3
mm9_v1_chr2_-_25483295_25483445	0.717997	HMX1.p2	AB222271|Fcna|14133|ficolin A	CT010383|Fcna|14133|ficolin A	AB007813|Fcna|14133|ficolin A	BC019180|Fcna|14133|ficolin A	AK138752|Fcna|14133|ficolin A
mm9_v1_chr8_-_114535165_114535257	0.717929	HMX1.p2	BC027356|Kars|85305|lysyl-tRNA synthetase	BC035324|Kars|85305|lysyl-tRNA synthetase	AK153236|Kars|85305|lysyl-tRNA synthetase	AK089053|Kars|85305|lysyl-tRNA synthetase	AK090203|Kars|85305|lysyl-tRNA synthetase	AK167693|Kars|85305|lysyl-tRNA synthetase	NM_001130868|Kars|85305|lysyl-tRNA synthetase	NM_053092|Kars|85305|lysyl-tRNA synthetase	BC036289|Kars|85305|lysyl-tRNA synthetase
mm9_v1_chr19_-_32462926_32462979	0.716471	HMX1.p2	AK151170|Sgms1|208449|sphingomyelin synthase 1	AK153406|Sgms1|208449|sphingomyelin synthase 1	AK146782|Sgms1|208449|sphingomyelin synthase 1	AY509044|Sgms1|208449|sphingomyelin synthase 1	NM_144792|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr4_-_128287236_128287341	0.715276	HMX1.p2	BC076602|Zscan20|269585|zinc finger and SCAN domains 20	AK047820|Zscan20|269585|zinc finger and SCAN domains 20	AK153688|Zscan20|269585|zinc finger and SCAN domains 20	AK153845|Zscan20|269585|zinc finger and SCAN domains 20	AK144249|Zscan20|269585|zinc finger and SCAN domains 20	NM_177758|Zscan20|269585|zinc finger and SCAN domains 20
mm9_v1_chr8_+_75247189_75247206	0.713224	HMX1.p2	AK165592|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC021160|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC129859|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	L38622|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC096367|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	AF038848|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	BC020049|Sin3b|20467|transcriptional regulator, SIN3B (yeast)
mm9_v1_chr1_-_183142055_183142112	0.712873	HMX1.p2	AK082326|Wdr26|226757|WD repeat domain 26	NM_145514|Wdr26|226757|WD repeat domain 26
mm9_v1_chr6_+_51382668_51382761	0.711783	HMX1.p2	AB013852|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	NM_010903|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK133935|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK136980|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK137881|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK017278|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK020550|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	AK153612|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3	BC005416|Nfe2l3|18025|nuclear factor, erythroid derived 2, like 3
mm9_v1_chr2_-_179777080_179777173	0.709456	HMX1.p2	BC014752|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	BC008222|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AF019662|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	NM_011969|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK088615|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK165563|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK146765|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7	AK168234|Psma7|26444|proteasome (prosome, macropain) subunit, alpha type 7
mm9_v1_chr14_-_73109609_73109649	0.708664	HMX1.p2	BC144880|Fndc3a|319448|fibronectin type III domain containing 3A	AK154756|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr11_+_74584328_74584437	0.706523	HMX1.p2	AK013306|Mett10d|67493|methyltransferase 10 domain containing	BC022902|Mett10d|67493|methyltransferase 10 domain containing	AK145022|Mett10d|67493|methyltransferase 10 domain containing	AK011780|Mett10d|67493|methyltransferase 10 domain containing	AK012739|Mett10d|67493|methyltransferase 10 domain containing	NM_026197|Mett10d|67493|methyltransferase 10 domain containing	AK145662|Mett10d|67493|methyltransferase 10 domain containing	AK029045|Mett10d|67493|methyltransferase 10 domain containing	AK161574|Mett10d|67493|methyltransferase 10 domain containing	BC003467|Mett10d|67493|methyltransferase 10 domain containing	AK168798|Mett10d|67493|methyltransferase 10 domain containing	BC037452|Mett10d|67493|methyltransferase 10 domain containing	BC054724|Mett10d|67493|methyltransferase 10 domain containing	BC049897|Mett10d|67493|methyltransferase 10 domain containing
mm9_v1_chr7_-_34798877_34798884	0.70594	HMX1.p2	BC024677|Abpb|233099|androgen binding protein beta	GU269237|Abpb|233099|androgen binding protein beta
mm9_v1_chr9_+_108417075_108417146	0.705132	HMX1.p2	BC018274|Qars|97541|glutaminyl-tRNA synthetase	AK189247|Qars|97541|glutaminyl-tRNA synthetase
mm9_v1_chr19_-_27504303_27504360	0.704791	HMX1.p2	AK088081|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK141893|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC145533|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	NM_177474|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	AK050829|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed	BC016186|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr7_-_3867085_3867115	0.703552	HMX1.p2	BC119598|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011087|Pira1|18722|paired-Ig-like receptor A1	U96682|Pira1|18722|paired-Ig-like receptor A1	BC127613|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	BC128500|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	U96684|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK152898|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011090|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK030846|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK054162|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
mm9_v1_chr8_+_86521498_86521570	0.703258	HMX1.p2	NM_001081415|Samd1|666704|sterile alpha motif domain containing 1
mm9_v1_chr14_-_56209708_56209857	0.701848	HMX1.p2	U60329|Psme2|19188|proteasome (prosome, macropain) 28 subunit, beta	D87910|Psme2b-ps|621823|protease (prosome, macropain) 28 subunit beta B, pseudogene	BC005680|Psme2|19188|proteasome (prosome, macropain) 28 subunit, beta	AK088654|Psme2|19188|proteasome (prosome, macropain) 28 subunit, beta	AK012344|Psme2|19188|proteasome (prosome, macropain) 28 subunit, beta	AK143556|Psme2|19188|proteasome (prosome, macropain) 28 subunit, beta	BC057859|Psme2|19188|proteasome (prosome, macropain) 28 subunit, beta	NM_011190|Psme2|19188|proteasome (prosome, macropain) 28 subunit, beta
mm9_v1_chr5_-_38874602_38874623	0.70027	HMX1.p2	AY776155|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001012363|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9
mm9_v1_chr6_-_115684968_115684968	0.699332	HMX1.p2	AK078864|Tmem40|94346|transmembrane protein 40	NM_001168259|Tmem40|94346|transmembrane protein 40
mm9_v1_chr10_-_116813919_116814033	0.697024	HMX1.p2	AK048615|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK046856|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK168764|Cpsf6|432508|cleavage and polyadenylation specific factor 6	BC068133|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK049749|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK077684|Cpsf6|432508|cleavage and polyadenylation specific factor 6	NM_001013391|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr1_+_4848408_4848408	0.69606	HMX1.p2	NM_001159751|Tcea1|21399|transcription elongation factor A (SII) 1
mm9_v1_chr7_-_54263783_54263783	0.694896	HMX1.p2	NM_175318|Spty2d1|101685|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm9_v1_chr16_-_57606866_57606989	0.691749	HMX1.p2	BC038891|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	BC038682|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019808|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK080386|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK003195|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK019979|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK012168|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	AK136657|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene	NM_025599|2610528E23Rik|66497|RIKEN cDNA 2610528E23 gene
mm9_v1_chr12_+_86311859_86311909	0.690798	HMX1.p2	NM_028632|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC094619|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC033045|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)
mm9_v1_chr12_-_27141277_27141301	0.690453	HMX1.p2	AF442152|Rsad2|58185|radical S-adenosyl methionine domain containing 2	CT010378|Rsad2|58185|radical S-adenosyl methionine domain containing 2	BC057868|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AF236064|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152600|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK010906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK036373|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150406|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150616|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150835|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151185|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151286|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151331|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151339|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151412|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151538|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151770|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151825|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151833|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151846|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151909|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151940|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152050|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152075|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152235|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152310|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152354|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152631|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152796|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152861|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152880|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152962|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153077|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153078|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153306|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153350|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK159147|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150812|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152493|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152601|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK149900|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150069|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150347|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150425|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150525|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150536|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150684|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150731|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150783|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150788|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151140|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151191|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151206|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151308|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151389|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151410|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151414|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151476|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151502|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151954|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151971|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152065|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152239|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152241|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152644|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152664|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152701|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152895|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152934|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153003|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153024|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153232|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153234|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153318|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153324|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153453|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153556|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153062|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr8_-_122625167_122625371	0.689695	HMX1.p2	AK170923|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK172462|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK089681|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK090333|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK170639|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK157968|Zdhhc7|102193|zinc finger, DHHC domain containing 7	AK041905|Zdhhc7|102193|zinc finger, DHHC domain containing 7	BC075666|Zdhhc7|102193|zinc finger, DHHC domain containing 7	NM_133967|Zdhhc7|102193|zinc finger, DHHC domain containing 7
mm9_v1_chr11_-_88921858_88922026	0.688772	HMX1.p2	AK049335|Dgke|56077|diacylglycerol kinase, epsilon	BC055867|Dgke|56077|diacylglycerol kinase, epsilon
mm9_v1_chr5_-_123350242_123350397	0.688752	HMX1.p2	AK031626|Kdm2b|30841|lysine (K)-specific demethylase 2B	BC057622|Kdm2b|30841|lysine (K)-specific demethylase 2B	NM_013910|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr15_-_78893275_78893359	0.687609	HMX1.p2	BC014743|Ankrd54|223690|ankyrin repeat domain 54	NM_144849|Ankrd54|223690|ankyrin repeat domain 54	DQ884878|Ankrd54|223690|ankyrin repeat domain 54	AK133785|Ankrd54|223690|ankyrin repeat domain 54	AK050440|Ankrd54|223690|ankyrin repeat domain 54	AK143625|Ankrd54|223690|ankyrin repeat domain 54	AK084500|Ankrd54|223690|ankyrin repeat domain 54
mm9_v1_chr7_+_138009310_138009466	0.687519	HMX1.p2	AK053879|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	AK083340|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	AK044224|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	BC020017|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	NM_133942|Plekha1|101476|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm9_v1_chr8_+_109034784_109034845	0.68618	HMX1.p2	AK045041|Cdh3|12560|cadherin 3	AK164577|Cdh3|12560|cadherin 3	NM_007665|Cdh3|12560|cadherin 3	AK031265|Cdh3|12560|cadherin 3	NM_001037809|Cdh3|12560|cadherin 3	X06340|Cdh3|12560|cadherin 3	BC098459|Cdh3|12560|cadherin 3
mm9_v1_chr5_-_135096100_135096123	0.683448	HMX1.p2	BC023227|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr4_+_135411923_135412023	0.683065	HMX1.p2	NM_001080387|Srsf10|14105|serine/arginine-rich splicing factor 10	NM_010178|Srsf10|14105|serine/arginine-rich splicing factor 10	AK134076|Srsf10|14105|serine/arginine-rich splicing factor 10	AK134289|Srsf10|14105|serine/arginine-rich splicing factor 10
mm9_v1_chrX_+_10294490_10294637	0.681843	HMX1.p2	NM_001166635|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	NM_026524|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK160062|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK090003|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK159166|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK172143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC004014|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC052899|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK151153|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr10_-_30338265_30338290	0.6817	HMX1.p2	AK002482|Hint3|66847|histidine triad nucleotide binding protein 3
mm9_v1_chr6_+_108778633_108778716	0.676798	HMX1.p2	AK030943|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	NM_138677|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AB042828|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK151668|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK152724|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK129090|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK152979|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	AK082920|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1	BC023237|Edem1|192193|ER degradation enhancer, mannosidase alpha-like 1
mm9_v1_chr3_+_134970663_134970722	0.675278	HMX1.p2	AK029417|Nhedc2|97086|Na+/H+ exchanger domain containing 2	NM_178877|Nhedc2|97086|Na+/H+ exchanger domain containing 2	AK076505|Nhedc2|97086|Na+/H+ exchanger domain containing 2	BC090977|Nhedc2|97086|Na+/H+ exchanger domain containing 2
mm9_v1_chr5_-_138125817_138125859	0.674829	HMX1.p2	BC046788|Agfg2|231801|ArfGAP with FG repeats 2	NM_178162|Agfg2|231801|ArfGAP with FG repeats 2
mm9_v1_chr3_-_37318482_37318523	0.673734	HMX1.p2	AF453428|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK145299|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC027267|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC146000|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_153561|Nudt6|229228|nudix (nucleoside diphosphate linked moiety X)-type motif 6
mm9_v1_chr3_+_138189154_138189154	0.673661	HMX1.p2	NM_007917|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr5_+_66254807_66254997	0.67301	HMX1.p2	NM_001081105|Rhoh|74734|ras homolog gene family, member H	AK017885|Rhoh|74734|ras homolog gene family, member H	AK169618|Rhoh|74734|ras homolog gene family, member H
mm9_v1_chr16_+_23224804_23224864	0.670495	HMX1.p2	BC092222|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	NM_145933|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr8_-_73386905_73387156	0.670332	HMX1.p2	AF303461|Kcnn1|84036|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	AF303462|Kcnn1|84036|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	BC090622|Kcnn1|84036|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1
mm9_v1_chr9_+_118387748_118387788	0.669551	HMX1.p2	AK089817|Eomes|13813|eomesodermin homolog (Xenopus laevis)
mm9_v1_chr15_+_73578455_73578455	0.668268	HMX1.p2	AK147489|Ptp4a3|19245|protein tyrosine phosphatase 4a3	NM_008975|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr11_-_69499014_69499062	0.666689	HMX1.p2	BC069900|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	AK009514|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	NM_001159505|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	NM_023517|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13	AK170351|Tnfsf13|69583|tumor necrosis factor (ligand) superfamily, member 13
mm9_v1_chr6_-_125444722_125444810	0.664937	HMX1.p2	AK151619|Cd9|12527|CD9 antigen	AK170310|Cd9|12527|CD9 antigen	AK151443|Cd9|12527|CD9 antigen	BC070474|Cd9|12527|CD9 antigen	NM_007657|Cd9|12527|CD9 antigen	AK002251|Cd9|12527|CD9 antigen	AK012793|Cd9|12527|CD9 antigen
mm9_v1_chr11_+_62692976_62693095	0.664624	HMX1.p2	AK077277|Fam18b|67510|family with sequence similarity 18, member B	NM_026210|Fam18b|67510|family with sequence similarity 18, member B	AK150936|Fam18b|67510|family with sequence similarity 18, member B	BC115504|Fam18b|67510|family with sequence similarity 18, member B	BC115505|Fam18b|67510|family with sequence similarity 18, member B	AK007707|Fam18b|67510|family with sequence similarity 18, member B	AK017572|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr11_-_101285951_101285970	0.663796	HMX1.p2	BC057970|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	AK004415|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr17_-_24832880_24833058	0.663489	HMX1.p2	AF148688|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)	AB041561|Gfer|11692|growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration)
mm9_v1_chr7_+_15974199_15974319	0.663071	HMX1.p2	NM_145708|Obox2|246792|oocyte specific homeobox 2	BC094912|Obox2|246792|oocyte specific homeobox 2
mm9_v1_chr8_-_4105727_4105834	0.662957	HMX1.p2	BC038121|Cd209f|69142|CD209f antigen	BC052782|Cd209f|69142|CD209f antigen	BC099497|Cd209f|69142|CD209f antigen	AK007638|Cd209f|69142|CD209f antigen	NM_026956|Cd209f|69142|CD209f antigen	BC021323|Cd209f|69142|CD209f antigen
mm9_v1_chr8_-_72498210_72498309	0.662761	HMX1.p2	NM_001113346|Gatad2a|234366|GATA zinc finger domain containing 2A
mm9_v1_chr12_-_88784769_88784966	0.662252	HMX1.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr2_+_120435110_120435179	0.662187	HMX1.p2	AK012086|Haus2|66296|HAUS augmin-like complex, subunit 2	AK012779|Haus2|66296|HAUS augmin-like complex, subunit 2	AK132300|Haus2|66296|HAUS augmin-like complex, subunit 2	AK010445|Haus2|66296|HAUS augmin-like complex, subunit 2	AK012960|Haus2|66296|HAUS augmin-like complex, subunit 2	NM_025475|Haus2|66296|HAUS augmin-like complex, subunit 2	BC086677|Haus2|66296|HAUS augmin-like complex, subunit 2
mm9_v1_chr2_+_26775279_26775409	0.661219	HMX1.p2	AK215042|Surf2|20931|surfeit gene 2
mm9_v1_chr11_+_101303558_101303776	0.65975	HMX1.p2	NM_011289|Rpl27|19942|ribosomal protein L27	AF214527|Rpl27|19942|ribosomal protein L27	AK132027|Rpl27|19942|ribosomal protein L27	AK146291|Rpl27|19942|ribosomal protein L27	AK008120|Rpl27|19942|ribosomal protein L27	AK012566|Rpl27|19942|ribosomal protein L27	AK010627|Rpl27|19942|ribosomal protein L27	AK002945|Rpl27|19942|ribosomal protein L27	BC024366|Rpl27|19942|ribosomal protein L27	BC082284|Rpl27|19942|ribosomal protein L27	AK088211|Rpl27|19942|ribosomal protein L27	BC090395|Rpl27|19942|ribosomal protein L27
mm9_v1_chr19_-_5295389_5295474	0.657686	HMX1.p2	BC029745|Sf3b2|319322|splicing factor 3b, subunit 2	AK151354|Sf3b2|319322|splicing factor 3b, subunit 2	AK019282|Sf3b2|319322|splicing factor 3b, subunit 2	AK152965|Sf3b2|319322|splicing factor 3b, subunit 2	AK012009|Sf3b2|319322|splicing factor 3b, subunit 2	AK150961|Sf3b2|319322|splicing factor 3b, subunit 2	AK159893|Sf3b2|319322|splicing factor 3b, subunit 2	AK011613|Sf3b2|319322|splicing factor 3b, subunit 2	BC045207|Sf3b2|319322|splicing factor 3b, subunit 2	AK146540|Sf3b2|319322|splicing factor 3b, subunit 2	AK152327|Sf3b2|319322|splicing factor 3b, subunit 2	AK146864|Sf3b2|319322|splicing factor 3b, subunit 2	AK147687|Sf3b2|319322|splicing factor 3b, subunit 2	AK149776|Sf3b2|319322|splicing factor 3b, subunit 2	AK012643|Sf3b2|319322|splicing factor 3b, subunit 2	AK142136|Sf3b2|319322|splicing factor 3b, subunit 2	AK146063|Sf3b2|319322|splicing factor 3b, subunit 2	BC049118|Sf3b2|319322|splicing factor 3b, subunit 2	NM_030109|Sf3b2|319322|splicing factor 3b, subunit 2
mm9_v1_chr5_-_144288812_144288864	0.655458	HMX1.p2	BC051053|Rac1|19353|RAS-related C3 botulinum substrate 1	BC003828|Rac1|19353|RAS-related C3 botulinum substrate 1	AK008435|Rac1|19353|RAS-related C3 botulinum substrate 1	AK009017|Rac1|19353|RAS-related C3 botulinum substrate 1	AK011072|Rac1|19353|RAS-related C3 botulinum substrate 1	AK034601|Rac1|19353|RAS-related C3 botulinum substrate 1	AK166383|Rac1|19353|RAS-related C3 botulinum substrate 1	NM_009007|Rac1|19353|RAS-related C3 botulinum substrate 1	AK047969|Rac1|19353|RAS-related C3 botulinum substrate 1
mm9_v1_chr2_+_90780626_90780644	0.655088	HMX1.p2	AK014492|Celf1|13046|CUGBP, Elav-like family member 1	AK156725|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr7_+_15245056_15245056	0.655019	HMX1.p2	BC099488|Gm4745|194588|predicted gene 4745	NM_001038676|Gm4745|194588|predicted gene 4745
mm9_v1_chr14_-_103381744_103381856	0.654678	HMX1.p2	BC116647|Kctd12|239217|potassium channel tetramerisation domain containing 12	BC116648|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK035535|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK172581|Kctd12|239217|potassium channel tetramerisation domain containing 12	NM_177715|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK087895|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr17_+_24857052_24857220	0.653614	HMX1.p2	AK012360|Rps2|16898|ribosomal protein S2	AK146259|Rps2|16898|ribosomal protein S2	AK166664|Rps2|16898|ribosomal protein S2	BC087956|Rps2|16898|ribosomal protein S2	AK004568|Rps2|16898|ribosomal protein S2	AK019265|Rps2|16898|ribosomal protein S2	AK151119|Rps2|16898|ribosomal protein S2	AK151985|Rps2|16898|ribosomal protein S2	AK152299|Rps2|16898|ribosomal protein S2	AK159121|Rps2|16898|ribosomal protein S2	AK159138|Rps2|16898|ribosomal protein S2	AK163821|Rps2|16898|ribosomal protein S2	AK166549|Rps2|16898|ribosomal protein S2	AK166726|Rps2|16898|ribosomal protein S2	AK167799|Rps2|16898|ribosomal protein S2	AK167974|Rps2|16898|ribosomal protein S2	AK168307|Rps2|16898|ribosomal protein S2	AK168528|Rps2|16898|ribosomal protein S2	AK169119|Rps2|16898|ribosomal protein S2	AK167033|Rps2|16898|ribosomal protein S2	AK168630|Rps2|16898|ribosomal protein S2	BC002186|Rps2|16898|ribosomal protein S2	BC091730|Rps2|16898|ribosomal protein S2	BC091755|Rps2|16898|ribosomal protein S2	BC092286|Rps2|16898|ribosomal protein S2	BC094058|Rps2|16898|ribosomal protein S2	BC094273|Rps2|16898|ribosomal protein S2	BC106136|Rps2|16898|ribosomal protein S2	BC110678|Rps2|16898|ribosomal protein S2	BC116446|Rps2|16898|ribosomal protein S2	BC093493|Rps2|16898|ribosomal protein S2	BC117558|Rps2|16898|ribosomal protein S2	AF283559|Rps2|16898|ribosomal protein S2
mm9_v1_chr8_+_13757654_13757836	0.653077	HMX1.p2	AK147938|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK167965|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK158014|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	BC026606|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	NM_027276|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)	AK168978|Cdc16|69957|CDC16 cell division cycle 16 homolog (S. cerevisiae)
mm9_v1_chr17_+_29169665_29169685	0.651342	HMX1.p2	X53824|Srsf3|20383|serine/arginine-rich splicing factor 3
mm9_v1_chr11_-_115971327_115971329	0.649176	HMX1.p2	BC145059|Trim47|217333|tripartite motif-containing 47	BC132148|Trim47|217333|tripartite motif-containing 47	BC137953|Trim47|217333|tripartite motif-containing 47	NM_172570|Trim47|217333|tripartite motif-containing 47
mm9_v1_chr12_-_32339626_32339690	0.647918	HMX1.p2	BC109351|Dus4l|71916|dihydrouridine synthase 4-like (S. cerevisiae)	AK148466|Dus4l|71916|dihydrouridine synthase 4-like (S. cerevisiae)	AK019227|Dus4l|71916|dihydrouridine synthase 4-like (S. cerevisiae)	AK010138|Dus4l|71916|dihydrouridine synthase 4-like (S. cerevisiae)	NM_028002|Dus4l|71916|dihydrouridine synthase 4-like (S. cerevisiae)
mm9_v1_chr2_+_172219293_172219452	0.647346	HMX1.p2	AK089450|Cass4|320664|Cas scaffolding protein family member 4	AK170726|Cass4|320664|Cas scaffolding protein family member 4	NM_001033538|Cass4|320664|Cas scaffolding protein family member 4	AK036419|Cass4|320664|Cas scaffolding protein family member 4	AK080960|Cass4|320664|Cas scaffolding protein family member 4	BC117858|Cass4|320664|Cas scaffolding protein family member 4	BC117859|Cass4|320664|Cas scaffolding protein family member 4	BC129976|Cass4|320664|Cas scaffolding protein family member 4	BC129975|Cass4|320664|Cas scaffolding protein family member 4	NM_001080820|Cass4|320664|Cas scaffolding protein family member 4
mm9_v1_chr6_-_95668770_95668830	0.64574	HMX1.p2	BC080781|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK045176|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK042987|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK156263|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK167136|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK172363|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK172561|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK172633|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	NM_011507|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit
mm9_v1_chr16_+_10545479_10545491	0.644069	HMX1.p2	AK122255|Clec16a|74374|C-type lectin domain family 16, member A	NM_177562|Clec16a|74374|C-type lectin domain family 16, member A	AK155314|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr7_+_152082435_152082493	0.642921	HMX1.p2	AK017829|Fgf15|14170|fibroblast growth factor 15	AF007268|Fgf15|14170|fibroblast growth factor 15	NM_008003|Fgf15|14170|fibroblast growth factor 15	BC021328|Fgf15|14170|fibroblast growth factor 15
mm9_v1_chr5_-_68238603_68238652	0.640938	HMX1.p2	AK141559|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	DQ503478|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK076388|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	AK045367|Atp8a1|11980|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm9_v1_chr4_+_133036317_133036339	0.639885	HMX1.p2	AK162145|Fam46b|100342|family with sequence similarity 46, member B
mm9_v1_chrX_-_48559008_48559019	0.638907	HMX1.p2	AK040522|Mbnl3|171170|muscleblind-like 3 (Drosophila)	NM_134163|Mbnl3|171170|muscleblind-like 3 (Drosophila)	AK088971|Mbnl3|171170|muscleblind-like 3 (Drosophila)
mm9_v1_chr17_-_26978355_26978414	0.638317	HMX1.p2	BC139299|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	BC139303|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)	AK142146|Nkx2-5|18091|NK2 transcription factor related, locus 5 (Drosophila)
mm9_v1_chr9_+_65308712_65308803	0.638306	HMX1.p2	AK150215|Spg21|27965|spastic paraplegia 21 homolog (human)	NM_138584|Spg21|27965|spastic paraplegia 21 homolog (human)	AK009332|Spg21|27965|spastic paraplegia 21 homolog (human)	AK170666|Spg21|27965|spastic paraplegia 21 homolog (human)	AK090017|Spg21|27965|spastic paraplegia 21 homolog (human)	AK150581|Spg21|27965|spastic paraplegia 21 homolog (human)	BC132377|Spg21|27965|spastic paraplegia 21 homolog (human)	BC132403|Spg21|27965|spastic paraplegia 21 homolog (human)	AK149930|Spg21|27965|spastic paraplegia 21 homolog (human)	AK011985|Spg21|27965|spastic paraplegia 21 homolog (human)	AK153284|Spg21|27965|spastic paraplegia 21 homolog (human)
mm9_v1_chr17_-_24664759_24664833	0.637663	HMX1.p2	BC008598|Traf7|224619|TNF receptor-associated factor 7	AK088431|Traf7|224619|TNF receptor-associated factor 7	AK131617|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr1_+_137221385_137221392	0.637057	HMX1.p2	AK079173|Lmod1|93689|leiomodin 1 (smooth muscle)	AK133276|Lmod1|93689|leiomodin 1 (smooth muscle)	NM_053106|Lmod1|93689|leiomodin 1 (smooth muscle)
mm9_v1_chr7_-_147222126_147222249	0.635691	HMX1.p2	BC025582|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK167924|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC025564|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC012519|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK153511|Tubgcp2|74237|tubulin, gamma complex associated protein 2	BC027034|Tubgcp2|74237|tubulin, gamma complex associated protein 2	AK146771|Tubgcp2|74237|tubulin, gamma complex associated protein 2	NM_133755|Tubgcp2|74237|tubulin, gamma complex associated protein 2
mm9_v1_chr11_+_116704983_116705004	0.634693	HMX1.p2	AK003450|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK160133|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene
mm9_v1_chr14_+_55087412_55087483	0.633403	HMX1.p2	BC011058|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr7_-_141568510_141568510	0.632646	HMX1.p2	AK145411|D7Ertd443e|71007|DNA segment, Chr 7, ERATO Doi 443, expressed	NM_001081331|D7Ertd443e|71007|DNA segment, Chr 7, ERATO Doi 443, expressed
mm9_v1_chr18_-_61885933_61886002	0.631791	HMX1.p2	AF041060|Grpel2|17714|GrpE-like 2, mitochondrial	BC094583|Grpel2|17714|GrpE-like 2, mitochondrial	BC068232|Grpel2|17714|GrpE-like 2, mitochondrial	AK012634|Grpel2|17714|GrpE-like 2, mitochondrial	AK134455|Grpel2|17714|GrpE-like 2, mitochondrial	AK003011|Grpel2|17714|GrpE-like 2, mitochondrial	AK082983|Grpel2|17714|GrpE-like 2, mitochondrial	BC120747|Grpel2|17714|GrpE-like 2, mitochondrial	AK145493|Grpel2|17714|GrpE-like 2, mitochondrial	NM_021296|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr2_-_163996824_163996848	0.63053	HMX1.p2	AF008573|Kcns1|16538|K+ voltage-gated channel, subfamily S, 1	NM_008435|Kcns1|16538|K+ voltage-gated channel, subfamily S, 1
mm9_v1_chr1_+_43502790_43502813	0.627759	HMX1.p2	AK014772|Nck2|17974|non-catalytic region of tyrosine kinase adaptor protein 2
mm9_v1_chr7_+_148265667_148265676	0.627026	HMX1.p2	NM_019762|Pkp3|56460|plakophilin 3	AF136719|Pkp3|56460|plakophilin 3
mm9_v1_chr7_+_17401610_17401709	0.625265	HMX1.p2	AK161673|Strn4|97387|striatin, calmodulin binding protein 4	BC080283|Strn4|97387|striatin, calmodulin binding protein 4	AK154615|Strn4|97387|striatin, calmodulin binding protein 4
mm9_v1_chr17_+_47863790_47863799	0.6245	HMX1.p2	AK008886|Pgc|109820|progastricsin (pepsinogen C)	AK008959|Pgc|109820|progastricsin (pepsinogen C)	AK160474|Pgc|109820|progastricsin (pepsinogen C)	NM_025973|Pgc|109820|progastricsin (pepsinogen C)	BC099409|Pgc|109820|progastricsin (pepsinogen C)
mm9_v1_chr7_-_121419535_121419643	0.624349	HMX1.p2	AF060088|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	BC005762|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK135326|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK167689|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK137054|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK161611|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AJ272021|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK162277|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK162439|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AJ272019|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK144784|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	AK088673|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1	NM_011965|Psma1|26440|proteasome (prosome, macropain) subunit, alpha type 1
mm9_v1_chr7_+_139158135_139158148	0.623344	HMX1.p2	AK036100|Gpr26|233919|G protein-coupled receptor 26	NM_173410|Gpr26|233919|G protein-coupled receptor 26
mm9_v1_chr19_+_43686803_43686990	0.622889	HMX1.p2	BC072614|Nkx2-3|18089|NK2 transcription factor related, locus 3 (Drosophila)	NM_008699|Nkx2-3|18089|NK2 transcription factor related, locus 3 (Drosophila)	AK044871|Nkx2-3|18089|NK2 transcription factor related, locus 3 (Drosophila)	AF202036|Nkx2-3|18089|NK2 transcription factor related, locus 3 (Drosophila)	Y11117|Nkx2-3|18089|NK2 transcription factor related, locus 3 (Drosophila)
mm9_v1_chr5_+_140267449_140267530	0.622509	HMX1.p2	AK143654|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	AK143717|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	NM_010757|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	D42124|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	AK153856|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	BC014295|Mafk|17135|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)
mm9_v1_chrX_-_71598873_71598966	0.621883	HMX1.p2	AK134624|Lage3|66192|L antigen family, member 3	BC027305|Lage3|66192|L antigen family, member 3	AK004210|Lage3|66192|L antigen family, member 3	AK002539|Lage3|66192|L antigen family, member 3	NM_025410|Lage3|66192|L antigen family, member 3
mm9_v1_chr1_-_136229504_136229504	0.621741	HMX1.p2	EU568872|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	NM_001144855|Ppfia4|68507|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
mm9_v1_chr11_+_120582777_120582942	0.620487	HMX1.p2	AK150203|Rac3|170758|RAS-related C3 botulinum substrate 3	NM_133223|Rac3|170758|RAS-related C3 botulinum substrate 3	AK089930|Rac3|170758|RAS-related C3 botulinum substrate 3	BC117028|Rac3|170758|RAS-related C3 botulinum substrate 3	BC119041|Rac3|170758|RAS-related C3 botulinum substrate 3	AB040819|Rac3|170758|RAS-related C3 botulinum substrate 3	AY974601|Rac3|170758|RAS-related C3 botulinum substrate 3
mm9_v1_chr4_+_33219530_33219530	0.619212	HMX1.p2	AF024620|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1	NM_008075|Gabrr1|14408|gamma-aminobutyric acid (GABA) C receptor, subunit rho 1
mm9_v1_chr16_-_8738377_8738512	0.617956	HMX1.p2	AF548565|Usp7|252870|ubiquitin specific peptidase 7	NM_001003918|Usp7|252870|ubiquitin specific peptidase 7	BC046963|Usp7|252870|ubiquitin specific peptidase 7
mm9_v1_chr6_-_124765218_124765272	0.616906	HMX1.p2	
mm9_v1_chr1_-_17087821_17087878	0.616655	HMX1.p2	AB024445|Jph1|57339|junctophilin 1	NM_020604|Jph1|57339|junctophilin 1
mm9_v1_chr8_+_86176531_86176611	0.616216	HMX1.p2	AK086506|Gipc1|67903|GIPC PDZ domain containing family, member 1	BC003490|Gipc1|67903|GIPC PDZ domain containing family, member 1	NM_018771|Gipc1|67903|GIPC PDZ domain containing family, member 1	AK002492|Gipc1|67903|GIPC PDZ domain containing family, member 1	AF104358|Gipc1|67903|GIPC PDZ domain containing family, member 1
mm9_v1_chr5_-_138227888_138227970	0.61433	HMX1.p2	AK154415|Mepce|231803|methylphosphate capping enzyme	NM_144913|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr9_-_62996767_62996767	0.611398	HMX1.p2	AK029916|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163758|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr2_+_180191031_180191048	0.610868	HMX1.p2	AK033598|Slco4a1|108115|solute carrier organic anion transporter family, member 4a1	AK172688|Slco4a1|108115|solute carrier organic anion transporter family, member 4a1
mm9_v1_chr13_-_23643511_23643511	0.61061	HMX1.p2	NM_175655|Hist1h4f|319157|histone cluster 1, H4f
mm9_v1_chr11_-_100334076_100334121	0.609017	HMX1.p2	BC111873|Klhl11|217194|kelch-like 11 (Drosophila)	AK029101|Klhl11|217194|kelch-like 11 (Drosophila)	NM_172565|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr2_+_112333086_112333189	0.608224	HMX1.p2	AK006808|Aven|74268|apoptosis, caspase activation inhibitor	NM_028844|Aven|74268|apoptosis, caspase activation inhibitor	BC100725|Aven|74268|apoptosis, caspase activation inhibitor	BC100735|Aven|74268|apoptosis, caspase activation inhibitor
mm9_v1_chr5_-_31490075_31490203	0.607595	HMX1.p2	
mm9_v1_chr4_-_133189327_133189466	0.607209	HMX1.p2	NM_001017968|Zdhhc18|503610|zinc finger, DHHC domain containing 18
mm9_v1_chr11_+_74462965_74463046	0.605731	HMX1.p2	AK145708|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK157310|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154925|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	NM_001081158|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154146|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK036540|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK150045|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	BC072573|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene
mm9_v1_chr2_-_94252368_94252477	0.6032	HMX1.p2	AK212083|Api5|11800|apoptosis inhibitor 5
mm9_v1_chr17_-_24664876_24664899	0.60284	HMX1.p2	NM_001172113|Traf7|224619|TNF receptor-associated factor 7	NM_001172114|Traf7|224619|TNF receptor-associated factor 7	NM_153792|Traf7|224619|TNF receptor-associated factor 7
mm9_v1_chr12_+_8681155_8681226	0.602035	HMX1.p2	AK122225|Pum2|80913|pumilio 2 (Drosophila)	AK141682|Pum2|80913|pumilio 2 (Drosophila)	AY027917|Pum2|80913|pumilio 2 (Drosophila)
mm9_v1_chr11_-_116000144_116000205	0.601433	HMX1.p2	AK013126|Mrpl38|60441|mitochondrial ribosomal protein L38	AK014632|Mrpl38|60441|mitochondrial ribosomal protein L38	AK159033|Mrpl38|60441|mitochondrial ribosomal protein L38	NM_024177|Mrpl38|60441|mitochondrial ribosomal protein L38
mm9_v1_chr13_-_38620603_38620707	0.600379	HMX1.p2	AK136046|Txndc5|105245|thioredoxin domain containing 5	AK224956|Txndc5|105245|thioredoxin domain containing 5	AK225019|Txndc5|105245|thioredoxin domain containing 5
mm9_v1_chr5_+_144165615_144165640	0.600008	HMX1.p2	CT010232|Kdelr2|66913|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
mm9_v1_chr3_+_95733186_95733221	0.599736	HMX1.p2	AK088401|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK012759|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK049647|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK159446|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK147888|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr3_+_130813214_130813388	0.5995	HMX1.p2	BC057543|Lef1|16842|lymphoid enhancer binding factor 1	AK131979|Lef1|16842|lymphoid enhancer binding factor 1	AK158769|Lef1|16842|lymphoid enhancer binding factor 1	NM_010703|Lef1|16842|lymphoid enhancer binding factor 1	X58636|Lef1|16842|lymphoid enhancer binding factor 1
mm9_v1_chr17_-_24210402_24210430	0.599072	HMX1.p2	BC021777|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK129077|Kctd5|69259|potassium channel tetramerisation domain containing 5	AK143644|Kctd5|69259|potassium channel tetramerisation domain containing 5
mm9_v1_chr6_-_30908981_30908989	0.59738	HMX1.p2	DQ534758|Klf14|619665|Kruppel-like factor 14	AK030435|Klf14|619665|Kruppel-like factor 14	NM_001135093|Klf14|619665|Kruppel-like factor 14
mm9_v1_chr6_-_78328836_78328858	0.594719	HMX1.p2	AK019033|Reg3d|30053|regenerating islet-derived 3 delta	AB035204|Reg3d|30053|regenerating islet-derived 3 delta	BC113760|Reg3d|30053|regenerating islet-derived 3 delta	AB028625|Reg3d|30053|regenerating islet-derived 3 delta	NM_001161741|Reg3d|30053|regenerating islet-derived 3 delta	NM_013893|Reg3d|30053|regenerating islet-derived 3 delta
mm9_v1_chr15_+_99803786_99803821	0.594385	HMX1.p2	
mm9_v1_chr8_+_87356149_87356307	0.591994	HMX1.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr11_-_100068823_100068834	0.590695	HMX1.p2	BC011074|Krt14|16664|keratin 14	NM_016958|Krt14|16664|keratin 14
mm9_v1_chr7_+_104845148_104845302	0.589574	HMX1.p2	AK133981|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK151356|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK151944|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK011789|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK031877|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK011691|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	BC005575|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	NM_023671|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK169259|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK078050|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	U53455|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A	AK180965|Clns1a|12729|chloride channel, nucleotide-sensitive, 1A
mm9_v1_chr14_+_104049453_104049469	0.588758	HMX1.p2	BC079866|Slain1|105439|SLAIN motif family, member 1	NM_198014|Slain1|105439|SLAIN motif family, member 1
mm9_v1_chr2_-_85488475_85488475	0.588366	HMX1.p2	NM_146573|Olfr1002|258566|olfactory receptor 1002
mm9_v1_chr7_-_121261237_121261289	0.587413	HMX1.p2	BC003871|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172113|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172037|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2
mm9_v1_chr14_+_31292797_31292864	0.586484	HMX1.p2	BC066173|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK047460|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK171707|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr11_+_96227071_96227074	0.585962	HMX1.p2	AK017686|Hoxb1|15407|homeobox B1	NM_008266|Hoxb1|15407|homeobox B1	BC103597|Hoxb1|15407|homeobox B1	BC103598|Hoxb1|15407|homeobox B1	BC103605|Hoxb1|15407|homeobox B1	BC103606|Hoxb1|15407|homeobox B1
mm9_v1_chr13_+_118009486_118009529	0.584579	HMX1.p2	AK167997|Emb|13723|embigin
mm9_v1_chr5_-_145891052_145891100	0.584404	HMX1.p2	AK177019|Pdap1|231887|PDGFA associated protein 1
mm9_v1_chr19_+_4097344_4097450	0.582706	HMX1.p2	AK012121|Cdk2ap2|52004|CDK2-associated protein 2	AK018035|Cdk2ap2|52004|CDK2-associated protein 2	NM_026373|Cdk2ap2|52004|CDK2-associated protein 2	AK003686|Cdk2ap2|52004|CDK2-associated protein 2
mm9_v1_chr11_+_19824835_19824933	0.581812	HMX1.p2	AB063496|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr1_-_74998017_74998079	0.58074	HMX1.p2	AK090147|Ihh|16147|Indian hedgehog	U85610|Ihh|16147|Indian hedgehog
mm9_v1_chr13_-_119175893_119176078	0.580117	HMX1.p2	AK013360|Mrps30|59054|mitochondrial ribosomal protein S30	BC029784|Mrps30|59054|mitochondrial ribosomal protein S30	AK011476|Mrps30|59054|mitochondrial ribosomal protein S30	AK151642|Mrps30|59054|mitochondrial ribosomal protein S30	NM_021556|Mrps30|59054|mitochondrial ribosomal protein S30
mm9_v1_chr14_+_28149221_28149270	0.579477	HMX1.p2	BC005517|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	BC012262|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr19_+_21727662_21727704	0.579362	HMX1.p2	AK050879|Fam108b|226016|family with sequence similarity 108, member B
mm9_v1_chr17_+_26275630_26275910	0.57788	HMX1.p2	NM_001159598|Axin1|12005|axin 1	NM_009733|Axin1|12005|axin 1	AF009011|Axin1|12005|axin 1	BC113171|Axin1|12005|axin 1	BC011544|Axin1|12005|axin 1
mm9_v1_chr6_-_52176102_52176188	0.576847	HMX1.p2	AB221551|Hoxa9|15405|homeobox A9	BC055059|Hoxa9|15405|homeobox A9
mm9_v1_chr1_-_155179844_155179930	0.576709	HMX1.p2	J02930|Lamc1|226519|laminin, gamma 1	AK144233|Lamc1|226519|laminin, gamma 1	J03484|Lamc1|226519|laminin, gamma 1	NM_010683|Lamc1|226519|laminin, gamma 1
mm9_v1_chr17_+_24889931_24889960	0.575178	HMX1.p2	AK146974|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	AY574375|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	NM_001012402|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC132520|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC138814|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	BC145424|Hs3st6|328779|heparan sulfate (glucosamine) 3-O-sulfotransferase 6
mm9_v1_chr1_-_52557130_52557348	0.575125	HMX1.p2	U47008|Nab1|17936|Ngfi-A binding protein 1	BC016886|Nab1|17936|Ngfi-A binding protein 1	BC005627|Nab1|17936|Ngfi-A binding protein 1	NM_008667|Nab1|17936|Ngfi-A binding protein 1
mm9_v1_chr7_+_19797886_19797886	0.574797	HMX1.p2	AK085829|Gpr4|319197|G protein-coupled receptor 4	NM_175668|Gpr4|319197|G protein-coupled receptor 4
mm9_v1_chr2_-_26092876_26092939	0.574324	HMX1.p2	AK157992|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK140324|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK165642|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	BC030934|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	NM_153559|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2
mm9_v1_chr1_-_58561631_58561830	0.570216	HMX1.p2	BC015257|Orc2|18393|origin recognition complex, subunit 2	NM_008765|Orc2|18393|origin recognition complex, subunit 2	U27457|Orc2|18393|origin recognition complex, subunit 2	AK048408|Orc2|18393|origin recognition complex, subunit 2	AK133604|Orc2|18393|origin recognition complex, subunit 2	AK146281|Orc2|18393|origin recognition complex, subunit 2	AK146859|Orc2|18393|origin recognition complex, subunit 2	AK051747|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr9_+_62189138_62189256	0.569079	HMX1.p2	NM_009672|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AK020753|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	BC062899|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AF022957|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr2_-_77118632_77118710	0.569017	HMX1.p2	BC013245|Sestd1|228071|SEC14 and spectrin domains 1	AK047939|Sestd1|228071|SEC14 and spectrin domains 1	BC044853|Sestd1|228071|SEC14 and spectrin domains 1	NM_175465|Sestd1|228071|SEC14 and spectrin domains 1
mm9_v1_chr17_+_47641999_47642189	0.568964	HMX1.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr19_-_46119635_46119713	0.568722	HMX1.p2	NM_001113408|Ldb1|16825|LIM domain binding 1
mm9_v1_chr7_+_52071438_52071457	0.568047	HMX1.p2	AK171455|Nup62|18226|nucleoporin 62	AK171611|Nup62|18226|nucleoporin 62
mm9_v1_chr11_+_48639639_48639641	0.566641	HMX1.p2	NM_053166|Trim7|94089|tripartite motif-containing 7	AF396656|Trim7|94089|tripartite motif-containing 7
mm9_v1_chr18_+_24148190_24148219	0.565347	HMX1.p2	BC138830|Zfp35|22694|zinc finger protein 35	BC138832|Zfp35|22694|zinc finger protein 35
mm9_v1_chr19_+_34141847_34141847	0.564325	HMX1.p2	AK154333|Lipn|70166|lipase, family member N	NM_027340|Lipn|70166|lipase, family member N
mm9_v1_chr2_-_155652217_155652350	0.563875	HMX1.p2	AK165946|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr19_-_47212695_47212783	0.563604	HMX1.p2	BC019197|Calhm2|72691|calcium homeostasis modulator 2	AK012923|Calhm2|72691|calcium homeostasis modulator 2	AK170068|Calhm2|72691|calcium homeostasis modulator 2	AK036961|Calhm2|72691|calcium homeostasis modulator 2	BC096564|Calhm2|72691|calcium homeostasis modulator 2	AK040739|Calhm2|72691|calcium homeostasis modulator 2	AK089278|Calhm2|72691|calcium homeostasis modulator 2	NM_133746|Calhm2|72691|calcium homeostasis modulator 2
mm9_v1_chr4_-_129815794_129815794	0.563531	HMX1.p2	AK140137|Hcrtr1|230777|hypocretin (orexin) receptor 1	NM_001163027|Hcrtr1|230777|hypocretin (orexin) receptor 1
mm9_v1_chr8_+_72426082_72426113	0.561313	HMX1.p2	BC049542|Tssk6|83984|testis-specific serine kinase 6	AF329484|Tssk6|83984|testis-specific serine kinase 6	NM_032004|Tssk6|83984|testis-specific serine kinase 6
mm9_v1_chr10_+_24589791_24589858	0.560905	HMX1.p2	NM_001166416|Med23|70208|mediator complex subunit 23	NM_027347|Med23|70208|mediator complex subunit 23	AK028545|Med23|70208|mediator complex subunit 23	AK042346|Med23|70208|mediator complex subunit 23	AF507918|Med23|70208|mediator complex subunit 23	BC050916|Med23|70208|mediator complex subunit 23	BC040398|Med23|70208|mediator complex subunit 23	AK129312|Med23|70208|mediator complex subunit 23
mm9_v1_chr4_+_133036046_133036100	0.560397	HMX1.p2	AK137659|Fam46b|100342|family with sequence similarity 46, member B	NM_175307|Fam46b|100342|family with sequence similarity 46, member B	AK163215|Fam46b|100342|family with sequence similarity 46, member B	AK028944|Fam46b|100342|family with sequence similarity 46, member B	AK135706|Fam46b|100342|family with sequence similarity 46, member B	BC038001|Fam46b|100342|family with sequence similarity 46, member B
mm9_v1_chr15_-_68090408_68090465	0.560176	HMX1.p2	BC053930|Zfat|380993|zinc finger and AT hook domain containing	NM_001145888|Zfat|380993|zinc finger and AT hook domain containing	NM_198644|Zfat|380993|zinc finger and AT hook domain containing
mm9_v1_chr2_+_69877182_69877182	0.55971	HMX1.p2	NM_177376|Myo3b|329421|myosin IIIB
mm9_v1_chr15_+_76541044_76541460	0.55842	HMX1.p2	AK036278|Lrrc14|223664|leucine rich repeat containing 14	AK149655|Lrrc14|223664|leucine rich repeat containing 14	AK047414|Lrrc14|223664|leucine rich repeat containing 14	AK132158|Lrrc14|223664|leucine rich repeat containing 14	AY344668|Lrrc14|223664|leucine rich repeat containing 14	AK159836|Lrrc14|223664|leucine rich repeat containing 14	AY239225|Lrrc14|223664|leucine rich repeat containing 14	AK053747|Lrrc14|223664|leucine rich repeat containing 14	NM_145471|Lrrc14|223664|leucine rich repeat containing 14	AY239226|Lrrc14|223664|leucine rich repeat containing 14	BC033482|Lrrc14|223664|leucine rich repeat containing 14	AK188512|Lrrc14|223664|leucine rich repeat containing 14	BC138217|Lrrc14|223664|leucine rich repeat containing 14	BC145203|Lrrc14|223664|leucine rich repeat containing 14
mm9_v1_chr4_-_22415277_22415277	0.558398	HMX1.p2	NM_008899|Pou3f2|18992|POU domain, class 3, transcription factor 2
mm9_v1_chr5_+_137960107_137960139	0.556816	HMX1.p2	AY176042|Gigyf1|57330|GRB10 interacting GYF protein 1	NM_031408|Gigyf1|57330|GRB10 interacting GYF protein 1	BC052875|Gigyf1|57330|GRB10 interacting GYF protein 1
mm9_v1_chr18_+_42554250_42554250	0.556507	HMX1.p2	BC145941|Pou4f3|18998|POU domain, class 4, transcription factor 3	NM_138945|Pou4f3|18998|POU domain, class 4, transcription factor 3
mm9_v1_chr3_-_78949796_78949796	0.555992	HMX1.p2	BC067056|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2	NM_001099624|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr18_+_36823713_36823835	0.555802	HMX1.p2	BC061242|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	NM_201256|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	BC111107|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	BC038258|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	AY226182|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3
mm9_v1_chr5_-_66542128_66542136	0.554151	HMX1.p2	AK089362|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr12_-_88729144_88729282	0.554087	HMX1.p2	U27455|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	X95642|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK089019|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK008871|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK044917|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK159346|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	NM_011479|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	BC003227|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2	AK057644|Sptlc2|20773|serine palmitoyltransferase, long chain base subunit 2
mm9_v1_chr11_+_94981430_94981448	0.554083	HMX1.p2	NM_010055|Dlx3|13393|distal-less homeobox 3	BC058852|Dlx3|13393|distal-less homeobox 3
mm9_v1_chr11_+_60526123_60526177	0.553307	HMX1.p2	BC029987|Llgl1|16897|lethal giant larvae homolog 1 (Drosophila)
mm9_v1_chr10_+_111409750_111409849	0.552823	HMX1.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr4_-_46416895_46416973	0.552544	HMX1.p2	AK077692|Hemgn|93966|hemogen	AY699986|Hemgn|93966|hemogen	AK156536|Hemgn|93966|hemogen	AK171890|Hemgn|93966|hemogen	AK172421|Hemgn|93966|hemogen
mm9_v1_chr11_-_114657186_114657223	0.551652	HMX1.p2	BC060053|Btbd17|72014|BTB (POZ) domain containing 17	BC122876|Btbd17|72014|BTB (POZ) domain containing 17	AK032100|Btbd17|72014|BTB (POZ) domain containing 17	NM_028055|Btbd17|72014|BTB (POZ) domain containing 17	AK046050|Btbd17|72014|BTB (POZ) domain containing 17	AK005160|Btbd17|72014|BTB (POZ) domain containing 17	BC057599|Btbd17|72014|BTB (POZ) domain containing 17
mm9_v1_chr14_+_55082960_55083081	0.551642	HMX1.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr5_-_115569276_115569358	0.551295	HMX1.p2	L11163|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	AK169428|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	BC055063|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	BC016259|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	NM_007383|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	AK155361|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain
mm9_v1_chr5_+_106129819_106129884	0.551095	HMX1.p2	AK158262|Lrrc8d|231549|leucine rich repeat containing 8D	NM_178701|Lrrc8d|231549|leucine rich repeat containing 8D	BC037717|Lrrc8d|231549|leucine rich repeat containing 8D	AK050400|Lrrc8d|231549|leucine rich repeat containing 8D	AK170452|Lrrc8d|231549|leucine rich repeat containing 8D
mm9_v1_chr6_-_28211910_28211939	0.546125	HMX1.p2	BC066073|Zfp800|627049|zinc finger protein 800
mm9_v1_chr1_+_123327668_123327740	0.544562	HMX1.p2	AK014621|Ccdc93|70829|coiled-coil domain containing 93	AK159415|Ccdc93|70829|coiled-coil domain containing 93	AK052300|Ccdc93|70829|coiled-coil domain containing 93	AK020306|Ccdc93|70829|coiled-coil domain containing 93	AK085701|Ccdc93|70829|coiled-coil domain containing 93	BC054083|Ccdc93|70829|coiled-coil domain containing 93
mm9_v1_chr19_+_9092973_9093058	0.541307	HMX1.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr9_-_44150387_44150463	0.541131	HMX1.p2	AK028234|Hmbs|15288|hydroxymethylbilane synthase	AK143558|Hmbs|15288|hydroxymethylbilane synthase	AK158160|Hmbs|15288|hydroxymethylbilane synthase	NM_001110251|Hmbs|15288|hydroxymethylbilane synthase
mm9_v1_chr8_+_122136646_122136659	0.540702	HMX1.p2	AK015063|Adad2|75773|adenosine deaminase domain containing 2	NM_029428|Adad2|75773|adenosine deaminase domain containing 2	BC137980|Adad2|75773|adenosine deaminase domain containing 2
mm9_v1_chr16_-_36408420_36408542	0.539411	HMX1.p2	M92418|Stfa2|20862|stefin A2	NM_001082545|Stfa2|20862|stefin A2	BC138004|Stfa2|20862|stefin A2
mm9_v1_chr17_-_10512094_10512209	0.539267	HMX1.p2	BC053426|Qk|19317|quaking
mm9_v1_chrX_+_54306724_54306791	0.539115	HMX1.p2	AK012522|Htatsf1|72459|HIV TAT specific factor 1	BC037711|Htatsf1|72459|HIV TAT specific factor 1	NM_028242|Htatsf1|72459|HIV TAT specific factor 1
mm9_v1_chr3_+_96962693_96962789	0.538888	HMX1.p2	AK165356|Acp6|66659|acid phosphatase 6, lysophosphatidic	NM_019800|Acp6|66659|acid phosphatase 6, lysophosphatidic	AB030038|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK077729|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK160271|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK002783|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK171757|Acp6|66659|acid phosphatase 6, lysophosphatidic
mm9_v1_chr9_-_71011053_71011095	0.538731	HMX1.p2	BC024105|Aqp9|64008|aquaporin 9	AK050042|Aqp9|64008|aquaporin 9	NM_022026|Aqp9|64008|aquaporin 9
mm9_v1_chr7_-_145589409_145589421	0.536599	HMX1.p2	AK017700|Tcerg1l|70571|transcription elongation regulator 1-like	NM_183289|Tcerg1l|70571|transcription elongation regulator 1-like
mm9_v1_chr6_-_148893155_148893361	0.534896	HMX1.p2	AK046519|Fam60a|56306|family with sequence similarity 60, member A
mm9_v1_chr10_+_69559860_69560052	0.534706	HMX1.p2	NM_001111121|Ccdc6|76551|coiled-coil domain containing 6
mm9_v1_chr14_-_13178341_13178378	0.532779	HMX1.p2	AK019996|Fezf2|54713|Fez family zinc finger 2	BC055718|Fezf2|54713|Fez family zinc finger 2	NM_080433|Fezf2|54713|Fez family zinc finger 2
mm9_v1_chr11_+_62692956_62692968	0.529935	HMX1.p2	AK050027|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr10_+_10869224_10869321	0.529007	HMX1.p2	AK082160|Shprh|268281|SNF2 histone linker PHD RING helicase	AK053448|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_001077707|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_172937|Shprh|268281|SNF2 histone linker PHD RING helicase	BC055003|Shprh|268281|SNF2 histone linker PHD RING helicase	AK048265|Shprh|268281|SNF2 histone linker PHD RING helicase	AK085285|Shprh|268281|SNF2 histone linker PHD RING helicase	AK011809|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162264|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162266|Shprh|268281|SNF2 histone linker PHD RING helicase
mm9_v1_chr3_-_89197124_89197146	0.528598	HMX1.p2	BC091651|Zbtb7b|22724|zinc finger and BTB domain containing 7B	NM_009565|Zbtb7b|22724|zinc finger and BTB domain containing 7B
mm9_v1_chr19_-_14671832_14671910	0.526643	HMX1.p2	AF229633|Tle4|21888|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm9_v1_chr11_+_100931369_100931476	0.526462	HMX1.p2	AK143546|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	NM_013792|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK170758|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK158045|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK164125|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	BC055733|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	U85247|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr11_+_58020859_58020933	0.525989	HMX1.p2	AF071427|Igtp|16145|interferon gamma induced GTPase
mm9_v1_chr14_-_76510534_76510637	0.525554	HMX1.p2	AK173238|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	BC029731|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK004707|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK082912|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	NM_026177|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene	AK016681|1200011I18Rik|67467|RIKEN cDNA 1200011I18 gene
mm9_v1_chr11_-_20612281_20612323	0.524738	HMX1.p2	AK150458|Aftph|216549|aftiphilin	AK152308|Aftph|216549|aftiphilin	AK152487|Aftph|216549|aftiphilin	AK161532|Aftph|216549|aftiphilin
mm9_v1_chr7_+_52071622_52071810	0.523766	HMX1.p2	AK166621|Nup62|18226|nucleoporin 62	BC089317|Nup62|18226|nucleoporin 62	AK149637|Nup62|18226|nucleoporin 62	NM_001171024|Nup62-il4i1|100328588|Nup62-Il4i1 protein	AK169178|Nup62|18226|nucleoporin 62	AK168486|Nup62|18226|nucleoporin 62	AK147894|Nup62|18226|nucleoporin 62	AK133082|Nup62-il4i1|100328588|Nup62-Il4i1 protein	AK155059|Nup62|18226|nucleoporin 62	AK168166|Nup62|18226|nucleoporin 62	AK150087|Nup62|18226|nucleoporin 62	BC005784|Nup62|18226|nucleoporin 62	NM_053074|Nup62|18226|nucleoporin 62	S59342|Nup62|18226|nucleoporin 62
mm9_v1_chr15_+_74552040_74552053	0.523015	HMX1.p2	AK019809|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr17_+_80706746_80706746	0.521985	HMX1.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr5_+_122734363_122734418	0.520477	HMX1.p2	AK135118|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK083481|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	AK078914|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	BC068149|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)	NM_177242|Pptc7|320717|PTC7 protein phosphatase homolog (S. cerevisiae)
mm9_v1_chr16_+_18836666_18836685	0.519632	HMX1.p2	AK160192|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene	NM_001033164|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene	AK010889|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene	AK153794|2510002D24Rik|72307|RIKEN cDNA 2510002D24 gene
mm9_v1_chr4_+_130037378_130037455	0.518885	HMX1.p2	NM_025645|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	AK002371|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	AK152287|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	AK152352|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	AK169605|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	AK148443|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	BC058365|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	AK004277|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)	AK136135|Snrnp40|66585|small nuclear ribonucleoprotein 40 (U5)
mm9_v1_chr15_-_76205367_76205367	0.517542	HMX1.p2	AK007032|Tssk5|73542|testis-specific serine kinase 5	NM_183099|Tssk5|73542|testis-specific serine kinase 5
mm9_v1_chr4_+_33149973_33150101	0.51682	HMX1.p2	AF024621|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	NM_008076|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2	BC057957|Gabrr2|14409|gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
mm9_v1_chr13_-_96145269_96145292	0.515879	HMX1.p2	AK017248|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008168|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008174|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008399|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AY500995|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	BC052410|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	NM_025630|Aggf1|66549|angiogenic factor with G patch and FHA domains 1
mm9_v1_chr17_-_66235094_66235137	0.514384	HMX1.p2	NM_009067|Ralbp1|19765|ralA binding protein 1	AK138197|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr17_+_29169612_29169642	0.513318	HMX1.p2	AK152704|Srsf3|20383|serine/arginine-rich splicing factor 3	AK009895|Srsf3|20383|serine/arginine-rich splicing factor 3	AK011657|Srsf3|20383|serine/arginine-rich splicing factor 3	AK078891|Srsf3|20383|serine/arginine-rich splicing factor 3	AK134177|Srsf3|20383|serine/arginine-rich splicing factor 3	AK135298|Srsf3|20383|serine/arginine-rich splicing factor 3	AK141440|Srsf3|20383|serine/arginine-rich splicing factor 3	AK145089|Srsf3|20383|serine/arginine-rich splicing factor 3	AK145600|Srsf3|20383|serine/arginine-rich splicing factor 3	AK145715|Srsf3|20383|serine/arginine-rich splicing factor 3	AK152411|Srsf3|20383|serine/arginine-rich splicing factor 3	AK152779|Srsf3|20383|serine/arginine-rich splicing factor 3	AK153073|Srsf3|20383|serine/arginine-rich splicing factor 3	AK153209|Srsf3|20383|serine/arginine-rich splicing factor 3	AK154046|Srsf3|20383|serine/arginine-rich splicing factor 3	AK150912|Srsf3|20383|serine/arginine-rich splicing factor 3	AK088122|Srsf3|20383|serine/arginine-rich splicing factor 3	AK146010|Srsf3|20383|serine/arginine-rich splicing factor 3	AK085863|Srsf3|20383|serine/arginine-rich splicing factor 3	AK146610|Srsf3|20383|serine/arginine-rich splicing factor 3	AK146253|Srsf3|20383|serine/arginine-rich splicing factor 3	BC068111|Srsf3|20383|serine/arginine-rich splicing factor 3	BC083316|Srsf3|20383|serine/arginine-rich splicing factor 3	BC071196|Srsf3|20383|serine/arginine-rich splicing factor 3
mm9_v1_chr12_-_58647074_58647107	0.511593	HMX1.p2	BC096524|Foxa1|15375|forkhead box A1	NM_008259|Foxa1|15375|forkhead box A1
mm9_v1_chr4_+_136166351_136166390	0.510621	HMX1.p2	AK016074|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	NM_026300|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	BC048442|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	AK015053|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene
mm9_v1_chr2_+_90780646_90780662	0.51057	HMX1.p2	AK143698|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr11_+_97177029_97177191	0.507984	HMX1.p2	NM_025927|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011163|Mrpl45|67036|mitochondrial ribosomal protein L45	AK011605|Mrpl45|67036|mitochondrial ribosomal protein L45	AK081922|Mrpl45|67036|mitochondrial ribosomal protein L45	AK157771|Mrpl45|67036|mitochondrial ribosomal protein L45	BC020130|Mrpl45|67036|mitochondrial ribosomal protein L45	AK198473|Mrpl45|67036|mitochondrial ribosomal protein L45
mm9_v1_chr11_-_97490978_97491083	0.507347	HMX1.p2	AK087411|E130012A19Rik|103551|RIKEN cDNA E130012A19 gene	BC055770|E130012A19Rik|103551|RIKEN cDNA E130012A19 gene	NM_175332|E130012A19Rik|103551|RIKEN cDNA E130012A19 gene
mm9_v1_chr8_-_124956759_124956863	0.506922	HMX1.p2	M31775|Cyba|13057|cytochrome b-245, alpha polypeptide	EU791539|Cyba|13057|cytochrome b-245, alpha polypeptide	BC026791|Cyba|13057|cytochrome b-245, alpha polypeptide	AK018713|Cyba|13057|cytochrome b-245, alpha polypeptide	AK131580|Cyba|13057|cytochrome b-245, alpha polypeptide	AK171748|Cyba|13057|cytochrome b-245, alpha polypeptide	AK078854|Cyba|13057|cytochrome b-245, alpha polypeptide	AK021200|Cyba|13057|cytochrome b-245, alpha polypeptide	AK152414|Cyba|13057|cytochrome b-245, alpha polypeptide	NM_007806|Cyba|13057|cytochrome b-245, alpha polypeptide
mm9_v1_chr4_+_135476603_135476713	0.506891	HMX1.p2	NM_024243|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK150890|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK151361|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK151879|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK170503|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK020610|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK002230|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK089958|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK151258|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK165604|Fuca1|71665|fucosidase, alpha-L- 1, tissue	BC003235|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK053323|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK151908|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK152070|Fuca1|71665|fucosidase, alpha-L- 1, tissue	AK150526|Fuca1|71665|fucosidase, alpha-L- 1, tissue
mm9_v1_chr2_+_157250020_157250043	0.505733	HMX1.p2	NM_001025395|Src|20779|Rous sarcoma oncogene	NM_009271|Src|20779|Rous sarcoma oncogene	BC039953|Src|20779|Rous sarcoma oncogene
mm9_v1_chr18_+_33098914_33099011	0.505135	HMX1.p2	AK043114|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	X58995|Camk4|12326|calcium/calmodulin-dependent protein kinase IV
mm9_v1_chr13_+_32893989_32894122	0.504679	HMX1.p2	AB056151|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr5_-_124804365_124804457	0.504201	HMX1.p2	AF011644|Cdk2ap1|13445|CDK2 (cyclin-dependent kinase 2)-associated protein 1
mm9_v1_chr14_-_56279210_56279348	0.503717	HMX1.p2	AF230273|Mdp1|67881|magnesium-dependent phosphatase 1	BC046613|Mdp1|67881|magnesium-dependent phosphatase 1	AK008881|Mdp1|67881|magnesium-dependent phosphatase 1	AK160438|Mdp1|67881|magnesium-dependent phosphatase 1	AK007694|Mdp1|67881|magnesium-dependent phosphatase 1	AK007319|Mdp1|67881|magnesium-dependent phosphatase 1	NM_023397|Mdp1|67881|magnesium-dependent phosphatase 1
mm9_v1_chr1_+_55294077_55294090	0.502893	HMX1.p2	AK042888|Mars2|212679|methionine-tRNA synthetase 2 (mitochondrial)	AK144628|Mars2|212679|methionine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr13_-_70980619_70980688	0.502694	HMX1.p2	AK173338|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	AK031314|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	AK134523|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	NM_172053|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16	BC034739|Adamts16|271127|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
mm9_v1_chr11_+_53246787_53246879	0.502034	HMX1.p2	NM_008110|Gdf9|14566|growth differentiation factor 9	AK136145|Gdf9|14566|growth differentiation factor 9	BC052667|Gdf9|14566|growth differentiation factor 9	L06444|Gdf9|14566|growth differentiation factor 9
mm9_v1_chr2_-_160192500_160192580	0.500409	HMX1.p2	BC016434|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	L36435|Mafb|16658|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm9_v1_chr14_+_104049411_104049445	0.499612	HMX1.p2	AK036190|Slain1|105439|SLAIN motif family, member 1
mm9_v1_chr9_+_108410335_108410519	0.497877	HMX1.p2	NM_133794|Qars|97541|glutaminyl-tRNA synthetase	AK145632|Qars|97541|glutaminyl-tRNA synthetase	AK155759|Qars|97541|glutaminyl-tRNA synthetase	AK161817|Qars|97541|glutaminyl-tRNA synthetase	AK163863|Qars|97541|glutaminyl-tRNA synthetase	AK170826|Qars|97541|glutaminyl-tRNA synthetase	AK171293|Qars|97541|glutaminyl-tRNA synthetase	AK030554|Qars|97541|glutaminyl-tRNA synthetase	AK088049|Qars|97541|glutaminyl-tRNA synthetase	AK165454|Qars|97541|glutaminyl-tRNA synthetase	AK167782|Qars|97541|glutaminyl-tRNA synthetase	AK004814|Qars|97541|glutaminyl-tRNA synthetase	BC079854|Qars|97541|glutaminyl-tRNA synthetase	AK180680|Qars|97541|glutaminyl-tRNA synthetase
mm9_v1_chr3_-_107888282_107888327	0.49715	HMX1.p2	AK034844|Ampd2|109674|adenosine monophosphate deaminase 2
mm9_v1_chr7_-_13007839_13007937	0.496392	HMX1.p2	AK137311|Zfp551|619331|zinc fingr protein 551	NM_001033820|Zfp551|619331|zinc fingr protein 551	BC141160|Zfp551|619331|zinc fingr protein 551	BC145466|Zfp551|619331|zinc fingr protein 551
mm9_v1_chr15_-_64143929_64144240	0.496241	HMX1.p2	AK122477|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	AK132979|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	BC048818|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1	AK147689|Asap1|13196|ArfGAP with SH# domain, ankyrin repeat and PH domain1
mm9_v1_chr4_-_45333366_45333502	0.495863	HMX1.p2	AK006281|Exosc3|66362|exosome component 3	BC023669|Exosc3|66362|exosome component 3	BC054085|Exosc3|66362|exosome component 3	NM_025513|Exosc3|66362|exosome component 3	AK012689|Exosc3|66362|exosome component 3
mm9_v1_chr7_+_25155455_25155523	0.495176	HMX1.p2	AB128930|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AF072884|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	AK085752|Kcnn4|16534|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm9_v1_chr11_-_57645498_57645648	0.494644	HMX1.p2	BC050182|Hand1|15110|heart and neural crest derivatives expressed transcript 1	U43714|Hand1|15110|heart and neural crest derivatives expressed transcript 1	S79216|Hand1|15110|heart and neural crest derivatives expressed transcript 1	NM_008213|Hand1|15110|heart and neural crest derivatives expressed transcript 1	U21226|Hand1|15110|heart and neural crest derivatives expressed transcript 1
mm9_v1_chr10_+_67442317_67442462	0.494601	HMX1.p2	AK052662|Rtkn2|170799|rhotekin 2	NM_001081346|Rtkn2|170799|rhotekin 2	BC158093|Rtkn2|170799|rhotekin 2	BC116341|Rtkn2|170799|rhotekin 2	BC116342|Rtkn2|170799|rhotekin 2	AK045134|Rtkn2|170799|rhotekin 2	AK030986|Rtkn2|170799|rhotekin 2
mm9_v1_chr19_-_4333914_4333961	0.493187	HMX1.p2	
mm9_v1_chr7_-_26506741_26506878	0.492922	HMX1.p2	
mm9_v1_chr3_+_95733228_95733353	0.492914	HMX1.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr6_+_85137924_85137936	0.49241	HMX1.p2	NM_010131|Emx1|13796|empty spiracles homolog 1 (Drosophila)	AB221645|Emx1|13796|empty spiracles homolog 1 (Drosophila)
mm9_v1_chr17_-_84586604_84586665	0.489873	HMX1.p2	AK142565|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2	BC006189|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2
mm9_v1_chr15_+_80502276_80502298	0.488388	HMX1.p2	AK145865|Fam83f|213956|family with sequence similarity 83, member F	NM_145986|Fam83f|213956|family with sequence similarity 83, member F	AK030342|Fam83f|213956|family with sequence similarity 83, member F	BC016600|Fam83f|213956|family with sequence similarity 83, member F
mm9_v1_chr4_+_135412061_135412061	0.488113	HMX1.p2	AK169071|Srsf10|14105|serine/arginine-rich splicing factor 10
mm9_v1_chr6_-_142912908_142912971	0.487396	HMX1.p2	AK046188|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	BC024821|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	NM_011374|St8sia1|20449|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm9_v1_chr1_-_129574597_129574597	0.486089	HMX1.p2	BC046234|Tmem163|72160|transmembrane protein 163	BC059048|Tmem163|72160|transmembrane protein 163	NM_028135|Tmem163|72160|transmembrane protein 163
mm9_v1_chr17_-_34764290_34764395	0.483906	HMX1.p2	BC052330|Ppt2|54397|palmitoyl-protein thioesterase 2
mm9_v1_chr12_-_100139666_100139693	0.483874	HMX1.p2	AK081694|Eml5|319670|echinoderm microtubule associated protein like 5	NM_001081191|Eml5|319670|echinoderm microtubule associated protein like 5
mm9_v1_chr17_+_88036128_88036130	0.482049	HMX1.p2	AK145752|Epcam|17075|epithelial cell adhesion molecule
mm9_v1_chr10_-_75855134_75855275	0.481878	HMX1.p2	AY179559|Pcnt|18541|pericentrin (kendrin)
mm9_v1_chr11_+_20346399_20346399	0.481729	HMX1.p2	NM_001195717|Gm12034|382492|predicted gene 12034
mm9_v1_chr9_+_62189285_62189297	0.481708	HMX1.p2	U73478|Anp32a|11737|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm9_v1_chr2_-_25349423_25349430	0.479204	HMX1.p2	BC111100|Lcn12|77701|lipocalin 12	AY299493|Lcn12|77701|lipocalin 12	NM_029958|Lcn12|77701|lipocalin 12
mm9_v1_chrY_+_234230_234474	0.478784	HMX1.p2	AK047790|Kdm5d|20592|lysine (K)-specific demethylase 5D	NM_011419|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK141096|Kdm5d|20592|lysine (K)-specific demethylase 5D	AK140971|Kdm5d|20592|lysine (K)-specific demethylase 5D	BC060077|Kdm5d|20592|lysine (K)-specific demethylase 5D	AF127244|Kdm5d|20592|lysine (K)-specific demethylase 5D	AB221607|Kdm5d|20592|lysine (K)-specific demethylase 5D	Z29652|Kdm5d|20592|lysine (K)-specific demethylase 5D
mm9_v1_chr10_+_101621491_101621538	0.478409	HMX1.p2	NM_001162368|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	AK015051|4930402I19Rik|73798|RIKEN cDNA 4930402I19 gene
mm9_v1_chr17_+_6270474_6270474	0.477492	HMX1.p2	AK154554|Tmem181a|77106|transmembrane protein 181A	NM_001033178|Tmem181a|77106|transmembrane protein 181A
mm9_v1_chr18_+_60934249_60934326	0.476748	HMX1.p2	NM_020600|Rps14|20044|ribosomal protein S14	AK028106|Rps14|20044|ribosomal protein S14	AK003148|Rps14|20044|ribosomal protein S14	AK011213|Rps14|20044|ribosomal protein S14	AK012425|Rps14|20044|ribosomal protein S14	AK012584|Rps14|20044|ribosomal protein S14	AK019233|Rps14|20044|ribosomal protein S14	AK146976|Rps14|20044|ribosomal protein S14	AK168237|Rps14|20044|ribosomal protein S14	AK146325|Rps14|20044|ribosomal protein S14	BC042940|Rps14|20044|ribosomal protein S14	BC062874|Rps14|20044|ribosomal protein S14
mm9_v1_chr6_+_57354359_57354457	0.475966	HMX1.p2	BC125351|Vmn1r19|171200|vomeronasal 1 receptor 19	BC132235|Vmn1r19|171200|vomeronasal 1 receptor 19	NM_134182|Vmn1r19|171200|vomeronasal 1 receptor 19
mm9_v1_chr7_+_16132605_16132645	0.472384	HMX1.p2	NM_027802|Obox1|71468|oocyte specific homeobox 1	AK018362|Obox1|71468|oocyte specific homeobox 1	AK136061|Obox1|71468|oocyte specific homeobox 1	BC141323|Obox1|71468|oocyte specific homeobox 1	BC141324|Obox1|71468|oocyte specific homeobox 1
mm9_v1_chr5_-_46030523_46030852	0.471546	HMX1.p2	AK081567|Fam184b|58227|family with sequence similarity 184, member B	BC056379|Fam184b|58227|family with sequence similarity 184, member B	NM_021416|Fam184b|58227|family with sequence similarity 184, member B	AB257856|Fam184b|58227|family with sequence similarity 184, member B
mm9_v1_chr17_+_29627950_29627989	0.47103	HMX1.p2	BC053019|Pim1|18712|proviral integration site 1	BC055316|Pim1|18712|proviral integration site 1	NM_008842|Pim1|18712|proviral integration site 1
mm9_v1_chr2_-_65962685_65962849	0.470259	HMX1.p2	U70538|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	BC043331|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	BC003765|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	AK007135|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	AK135489|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	AK019995|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	NM_015736|Galnt3|14425|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
mm9_v1_chr16_-_97832640_97832650	0.468734	HMX1.p2	BC038393|Tmprss2|50528|transmembrane protease, serine 2
mm9_v1_chr7_-_140793797_140793840	0.467653	HMX1.p2	BC100509|4930404H21Rik|73808|RIKEN cDNA 4930404H21 gene	NM_028654|4930404H21Rik|73808|RIKEN cDNA 4930404H21 gene	AK015080|4930404H21Rik|73808|RIKEN cDNA 4930404H21 gene
mm9_v1_chr1_-_75176926_75176956	0.46702	HMX1.p2	AK004605|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK150853|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK152584|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK168642|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr2_-_103143314_103143332	0.46638	HMX1.p2	BC005520|Ehf|13661|ets homologous factor	AK028651|Ehf|13661|ets homologous factor	BC006789|Ehf|13661|ets homologous factor
mm9_v1_chr3_+_87650676_87650676	0.465554	HMX1.p2	AF203343|Sh2d2a|27371|SH2 domain protein 2A	NM_001025571|Sh2d2a|27371|SH2 domain protein 2A	NM_021309|Sh2d2a|27371|SH2 domain protein 2A
mm9_v1_chr5_-_135391315_135391362	0.465135	HMX1.p2	BC115481|Cldn13|57255|claudin 13	BC115482|Cldn13|57255|claudin 13
mm9_v1_chr2_-_148597157_148597232	0.464974	HMX1.p2	BC100526|Cst11|78240|cystatin 11	AF454373|Cst11|78240|cystatin 11	AK020300|Cst11|78240|cystatin 11	NM_030059|Cst11|78240|cystatin 11
mm9_v1_chr7_+_13512764_13512769	0.463846	HMX1.p2	AK028523|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene	NM_029809|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene	AK009344|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene	BC141220|2310014L17Rik|381845|RIKEN cDNA 2310014L17 gene
mm9_v1_chr5_-_135095885_135095904	0.462845	HMX1.p2	
mm9_v1_chr6_-_128312524_128312777	0.46144	HMX1.p2	AK029454|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK011109|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK011167|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene	AK020031|5930416I19Rik|72440|RIKEN cDNA 5930416I19 gene
mm9_v1_chr16_+_22951183_22951214	0.461112	HMX1.p2	AY135662|Hrg|94175|histidine-rich glycoprotein	AB055897|Hrg|94175|histidine-rich glycoprotein	BC011168|Hrg|94175|histidine-rich glycoprotein	AF194028|Hrg|94175|histidine-rich glycoprotein
mm9_v1_chr2_-_142727172_142727216	0.460198	HMX1.p2	NM_001081133|Kif16b|16558|kinesin family member 16B
mm9_v1_chr3_+_94968227_94968295	0.459952	HMX1.p2	AF363972|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF363973|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB013729|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_011351|Sema6c|20360|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
mm9_v1_chr7_-_52391756_52391816	0.459611	HMX1.p2	BC019801|Flt3l|14256|FMS-like tyrosine kinase 3 ligand	AK020105|Flt3l|14256|FMS-like tyrosine kinase 3 ligand	NM_013520|Flt3l|14256|FMS-like tyrosine kinase 3 ligand
mm9_v1_chr19_+_60832080_60832311	0.458763	HMX1.p2	AK139148|Nanos1|332397|nanos homolog 1 (Drosophila)	BC056473|Nanos1|332397|nanos homolog 1 (Drosophila)	AK046189|Nanos1|332397|nanos homolog 1 (Drosophila)	AB095029|Nanos1|332397|nanos homolog 1 (Drosophila)
mm9_v1_chr2_+_24817941_24817990	0.458265	HMX1.p2	AK152000|Wdr85|67228|WD repeat domain 85	AK153537|Wdr85|67228|WD repeat domain 85	NM_026044|Wdr85|67228|WD repeat domain 85	BC086486|Wdr85|67228|WD repeat domain 85	AK013297|Wdr85|67228|WD repeat domain 85	AK078448|Wdr85|67228|WD repeat domain 85	AK087998|Wdr85|67228|WD repeat domain 85	BC056962|Wdr85|67228|WD repeat domain 85
mm9_v1_chr2_-_130912024_130912099	0.45757	HMX1.p2	BC141336|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	BC141335|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin
mm9_v1_chr13_-_49063188_49063196	0.456227	HMX1.p2	BC158134|Fam120a|218236|family with sequence similarity 120, member A	NM_001033268|Fam120a|218236|family with sequence similarity 120, member A
mm9_v1_chrX_+_159213665_159213700	0.454632	HMX1.p2	AK214866|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr4_+_48058102_48058256	0.452518	HMX1.p2	BC038520|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3	BC068150|Nr4a3|18124|nuclear receptor subfamily 4, group A, member 3
mm9_v1_chr6_+_124946723_124946772	0.452364	HMX1.p2	AK082984|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene	NM_175696|C530028O21Rik|319352|RIKEN cDNA C530028O21 gene
mm9_v1_chr6_+_116214215_116214252	0.451394	HMX1.p2	AK089032|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)	NM_001081317|Anubl1|67492|AN1, ubiquitin-like, homolog (Xenopus laevis)
mm9_v1_chr12_-_31596396_31596507	0.448272	HMX1.p2	Y17343|Acp1|11431|acid phosphatase 1, soluble	Y17345|Acp1|11431|acid phosphatase 1, soluble	BC093527|Acp1|11431|acid phosphatase 1, soluble	BC111893|Acp1|11431|acid phosphatase 1, soluble	BC112413|Acp1|11431|acid phosphatase 1, soluble	BC132258|Acp1|11431|acid phosphatase 1, soluble	BC145199|Acp1|11431|acid phosphatase 1, soluble	AK082955|Acp1|11431|acid phosphatase 1, soluble	BC096368|Acp1|11431|acid phosphatase 1, soluble	AK019186|Acp1|11431|acid phosphatase 1, soluble	AK170284|Acp1|11431|acid phosphatase 1, soluble	AK167887|Acp1|11431|acid phosphatase 1, soluble	AK014603|Acp1|11431|acid phosphatase 1, soluble	AK136144|Acp1|11431|acid phosphatase 1, soluble	AK018329|Acp1|11431|acid phosphatase 1, soluble	AK152429|Acp1|11431|acid phosphatase 1, soluble	NM_001110239|Acp1|11431|acid phosphatase 1, soluble	NM_021330|Acp1|11431|acid phosphatase 1, soluble
mm9_v1_chr11_+_82594636_82594745	0.447965	HMX1.p2	NM_010716|Lig3|16882|ligase III, DNA, ATP-dependent	BC026143|Lig3|16882|ligase III, DNA, ATP-dependent	AK031540|Lig3|16882|ligase III, DNA, ATP-dependent	AK156018|Lig3|16882|ligase III, DNA, ATP-dependent	AK010719|Lig3|16882|ligase III, DNA, ATP-dependent	AK150644|Lig3|16882|ligase III, DNA, ATP-dependent	AK167363|Lig3|16882|ligase III, DNA, ATP-dependent	BC049240|Lig3|16882|ligase III, DNA, ATP-dependent	BC083500|Lig3|16882|ligase III, DNA, ATP-dependent	AK143531|Lig3|16882|ligase III, DNA, ATP-dependent
mm9_v1_chr11_-_99427891_99427943	0.447888	HMX1.p2	D86424|Krtap3-1|69473|keratin associated protein 3-1	BC060278|Krtap3-1|69473|keratin associated protein 3-1	NM_023511|Krtap3-1|69473|keratin associated protein 3-1
mm9_v1_chr11_-_77979070_77979090	0.444949	HMX1.p2	AK046015|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr10_-_126725826_126725958	0.443932	HMX1.p2	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr5_-_65826956_65826968	0.443549	HMX1.p2	AK167462|Ugdh|22235|UDP-glucose dehydrogenase	AF061017|Ugdh|22235|UDP-glucose dehydrogenase	AK146693|Ugdh|22235|UDP-glucose dehydrogenase	AK168563|Ugdh|22235|UDP-glucose dehydrogenase	AK162298|Ugdh|22235|UDP-glucose dehydrogenase	AK168508|Ugdh|22235|UDP-glucose dehydrogenase
mm9_v1_chr3_-_89206571_89206714	0.441917	HMX1.p2	NM_020517|Lenep|57275|lens epithelial protein	AK053703|Lenep|57275|lens epithelial protein	BC006806|Lenep|57275|lens epithelial protein
mm9_v1_chr11_+_62875160_62875262	0.44129	HMX1.p2	AK016718|Tekt3|71062|tektin 3	AY252101|Tekt3|71062|tektin 3	NM_027660|Tekt3|71062|tektin 3	BC139074|Tekt3|71062|tektin 3	BC139075|Tekt3|71062|tektin 3	BC127605|Tekt3|71062|tektin 3	BC128270|Tekt3|71062|tektin 3
mm9_v1_chr7_+_139158204_139158284	0.439709	HMX1.p2	BC119380|Gpr26|233919|G protein-coupled receptor 26	BC120647|Gpr26|233919|G protein-coupled receptor 26
mm9_v1_chr2_+_90780665_90780699	0.43957	HMX1.p2	BC021393|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr10_+_7445797_7445835	0.43917	HMX1.p2	AK012319|Katna1|23924|katanin p60 (ATPase-containing) subunit A1	NM_011835|Katna1|23924|katanin p60 (ATPase-containing) subunit A1	AK041900|Katna1|23924|katanin p60 (ATPase-containing) subunit A1	AF153197|Katna1|23924|katanin p60 (ATPase-containing) subunit A1
mm9_v1_chr6_-_29166311_29166349	0.437546	HMX1.p2	AK089383|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1	AK171139|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1	AK047537|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr13_+_118009379_118009441	0.437319	HMX1.p2	NM_010330|Emb|13723|embigin	AK138271|Emb|13723|embigin	AK079570|Emb|13723|embigin
mm9_v1_chr4_-_63283448_63283462	0.436789	HMX1.p2	BC048618|1700018C11Rik|75524|RIKEN cDNA 1700018C11 gene	AK006081|1700018C11Rik|75524|RIKEN cDNA 1700018C11 gene	NM_029324|1700018C11Rik|75524|RIKEN cDNA 1700018C11 gene
mm9_v1_chr19_+_29175864_29175994	0.435291	HMX1.p2	AK009709|Rcl1|59028|RNA terminal phosphate cyclase-like 1	NM_021525|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK168153|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK012585|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK077751|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC053404|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC004574|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK153377|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AJ276895|Rcl1|59028|RNA terminal phosphate cyclase-like 1
mm9_v1_chr2_+_21289168_21289199	0.435097	HMX1.p2	AK083234|Gpr158|241263|G protein-coupled receptor 158	AK086256|Gpr158|241263|G protein-coupled receptor 158	NM_001004761|Gpr158|241263|G protein-coupled receptor 158	AK030530|Gpr158|241263|G protein-coupled receptor 158
mm9_v1_chr19_-_7070522_7070538	0.43298	HMX1.p2	AK002252|Nudt22|68323|nudix (nucleoside diphosphate linked moiety X)-type motif 22	NM_026675|Nudt22|68323|nudix (nucleoside diphosphate linked moiety X)-type motif 22
mm9_v1_chr11_+_6289339_6289394	0.432415	HMX1.p2	NM_028601|Zmiz2|52915|zinc finger, MIZ-type containing 2
mm9_v1_chr11_+_62413710_62413732	0.43238	HMX1.p2	
mm9_v1_chr10_+_77069322_77069457	0.427831	HMX1.p2	AK170896|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK171169|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)
mm9_v1_chr3_-_89856250_89856452	0.427681	HMX1.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr9_-_77391865_77391878	0.427138	HMX1.p2	AK082721|Lrrc1|214345|leucine rich repeat containing 1	NM_172528|Lrrc1|214345|leucine rich repeat containing 1	AK053293|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr2_-_91802081_91802083	0.426597	HMX1.p2	
mm9_v1_chr4_+_49072138_49072207	0.426077	HMX1.p2	AK031416|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK034251|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK087439|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene	AK160897|E130309F12Rik|272031|RIKEN cDNA E130309F12 gene
mm9_v1_chr2_+_119063194_119063277	0.42397	HMX1.p2	
mm9_v1_chr4_-_138313413_138313517	0.423494	HMX1.p2	BC125567|Pla2g2f|26971|phospholipase A2, group IIF	AK029254|Pla2g2f|26971|phospholipase A2, group IIF	AF166099|Pla2g2f|26971|phospholipase A2, group IIF	NM_012045|Pla2g2f|26971|phospholipase A2, group IIF
mm9_v1_chr4_-_82505410_82505478	0.423149	HMX1.p2	BC043110|Zdhhc21|68268|zinc finger, DHHC domain containing 21	AK020293|Zdhhc21|68268|zinc finger, DHHC domain containing 21	AK148344|Zdhhc21|68268|zinc finger, DHHC domain containing 21	AK144108|Zdhhc21|68268|zinc finger, DHHC domain containing 21
mm9_v1_chr18_+_57514370_57514505	0.419754	HMX1.p2	NM_028447|Prrc1|73137|proline-rich coiled-coil 1	AK004443|Prrc1|73137|proline-rich coiled-coil 1	AK143537|Prrc1|73137|proline-rich coiled-coil 1	AK014139|Prrc1|73137|proline-rich coiled-coil 1	BC014817|Prrc1|73137|proline-rich coiled-coil 1
mm9_v1_chr14_-_27489331_27489368	0.419409	HMX1.p2	BC064450|Pde12|211948|phosphodiesterase 12	NM_178668|Pde12|211948|phosphodiesterase 12	AK161083|Pde12|211948|phosphodiesterase 12
mm9_v1_chr11_+_48615164_48615222	0.418445	HMX1.p2	AK012242|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr13_-_101545800_101545853	0.418305	HMX1.p2	AK012907|Cenph|26886|centromere protein H	BC025084|Cenph|26886|centromere protein H	AK011264|Cenph|26886|centromere protein H	AK011739|Cenph|26886|centromere protein H	AK006208|Cenph|26886|centromere protein H	AK011738|Cenph|26886|centromere protein H	AK010533|Cenph|26886|centromere protein H	AB017634|Cenph|26886|centromere protein H	NM_021886|Cenph|26886|centromere protein H
mm9_v1_chr5_+_28643698_28643741	0.417933	HMX1.p2	NM_028234|Rbm33|381626|RNA binding motif protein 33	AK014289|Rbm33|381626|RNA binding motif protein 33
mm9_v1_chr5_-_135391395_135391399	0.416672	HMX1.p2	AF516681|Cldn13|57255|claudin 13	AK010869|Cldn13|57255|claudin 13	NM_020504|Cldn13|57255|claudin 13
mm9_v1_chr15_-_101648565_101648599	0.416509	HMX1.p2	BC120485|Krt2|16681|keratin 2	BC139485|Krt2|16681|keratin 2	X74784|Krt2|16681|keratin 2	AK161078|Krt2|16681|keratin 2	AK132476|Krt2|16681|keratin 2	AK161098|Krt2|16681|keratin 2	NM_010668|Krt2|16681|keratin 2
mm9_v1_chr19_-_12576485_12576634	0.41608	HMX1.p2	NM_172442|Dtx4|207521|deltex 4 homolog (Drosophila)
mm9_v1_chr11_+_95275577_95275627	0.412861	HMX1.p2	BC043131|Spop|20747|speckle-type POZ protein
mm9_v1_chr3_+_96962930_96963018	0.412709	HMX1.p2	BC047276|Acp6|66659|acid phosphatase 6, lysophosphatidic	AK089736|Acp6|66659|acid phosphatase 6, lysophosphatidic
mm9_v1_chr8_+_128434349_128434353	0.411008	HMX1.p2	AK220424|BC021891|234878|cDNA sequence BC021891	NM_145608|BC021891|234878|cDNA sequence BC021891	BC021891|BC021891|234878|cDNA sequence BC021891
mm9_v1_chr7_-_80520624_80520679	0.410831	HMX1.p2	AK053954|A730056A06Rik|319783|RIKEN cDNA A730056A06 gene	AK043101|A730056A06Rik|319783|RIKEN cDNA A730056A06 gene
mm9_v1_chr7_-_118089700_118089700	0.409349	HMX1.p2	NM_010826|Mrvi1|17540|MRV integration site 1	U63408|Mrvi1|17540|MRV integration site 1
mm9_v1_chr4_+_135979438_135979444	0.407763	HMX1.p2	AK082016|Htr1d|15552|5-hydroxytryptamine (serotonin) receptor 1D	NM_008309|Htr1d|15552|5-hydroxytryptamine (serotonin) receptor 1D	BC103532|Htr1d|15552|5-hydroxytryptamine (serotonin) receptor 1D	BC103536|Htr1d|15552|5-hydroxytryptamine (serotonin) receptor 1D	BC103535|Htr1d|15552|5-hydroxytryptamine (serotonin) receptor 1D
mm9_v1_chr14_-_66832383_66832388	0.406118	HMX1.p2	BC137704|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	BC144849|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta	NM_001162366|Ptk2b|19229|PTK2 protein tyrosine kinase 2 beta
mm9_v1_chr2_-_25066706_25067008	0.404641	HMX1.p2	AK087524|Cobra1|58202|cofactor of BRCA1	AK080419|Cobra1|58202|cofactor of BRCA1	AK214490|Cobra1|58202|cofactor of BRCA1	BC004762|Cobra1|58202|cofactor of BRCA1	AB041607|Cobra1|58202|cofactor of BRCA1	AK046129|Cobra1|58202|cofactor of BRCA1	NM_021393|Cobra1|58202|cofactor of BRCA1
mm9_v1_chr4_+_151307819_151307875	0.404616	HMX1.p2	NM_172704|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK089983|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK053156|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK156793|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK171781|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK172542|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC075619|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC085257|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC079852|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11
mm9_v1_chr7_+_148401781_148401819	0.40354	HMX1.p2	AK002243|Rassf7|66985|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
mm9_v1_chr1_-_167090729_167090903	0.40141	HMX1.p2	AF345520|Tbx19|83993|T-box 19	BC120635|Tbx19|83993|T-box 19	BC137731|Tbx19|83993|T-box 19	AF348321|Tbx19|83993|T-box 19	AK038666|Tbx19|83993|T-box 19	NM_032005|Tbx19|83993|T-box 19
mm9_v1_chr5_-_135096716_135096886	0.400099	HMX1.p2	BC023337|Eif4h|22384|eukaryotic translation initiation factor 4H
mm9_v1_chr8_+_18595130_18595172	0.400054	HMX1.p2	AK083572|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK138858|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK042026|Mcph1|244329|microcephaly, primary autosomal recessive 1	BC056924|Mcph1|244329|microcephaly, primary autosomal recessive 1	NM_173189|Mcph1|244329|microcephaly, primary autosomal recessive 1
mm9_v1_chr7_+_127317371_127317410	0.400011	HMX1.p2	NM_028085|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	AK008229|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	BC115784|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	BC118013|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B
mm9_v1_chrX_+_137909951_137910122	0.399518	HMX1.p2	AK133179|Col4a5|12830|collagen, type IV, alpha 5	NM_001163155|Col4a5|12830|collagen, type IV, alpha 5	NM_007736|Col4a5|12830|collagen, type IV, alpha 5	AB041350|Col4a5|12830|collagen, type IV, alpha 5	BC082788|Col4a5|12830|collagen, type IV, alpha 5
mm9_v1_chr1_-_184447549_184447745	0.399501	HMX1.p2	AF015038|Capn2|12334|calpain 2	AK150695|Capn2|12334|calpain 2	AK152094|Capn2|12334|calpain 2	AK152790|Capn2|12334|calpain 2	AK152994|Capn2|12334|calpain 2	AK052141|Capn2|12334|calpain 2	BC054726|Capn2|12334|calpain 2	NM_009794|Capn2|12334|calpain 2	AK154855|Capn2|12334|calpain 2	D38117|Capn2|12334|calpain 2	AK053832|Capn2|12334|calpain 2
mm9_v1_chr16_-_29544883_29544949	0.399418	HMX1.p2	AK029367|Atp13a4|224079|ATPase type 13A4	AK014520|Atp13a4|224079|ATPase type 13A4	AK029303|Atp13a4|224079|ATPase type 13A4	AK028776|Atp13a4|224079|ATPase type 13A4	NM_001164613|Atp13a4|224079|ATPase type 13A4
mm9_v1_chr12_+_75008853_75009062	0.39878	HMX1.p2	NM_010431|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK034087|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK150367|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK138944|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AK017853|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	BC026139|Hif1a|15251|hypoxia inducible factor 1, alpha subunit	AF003695|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr5_-_137943329_137943368	0.398058	HMX1.p2	AK158620|Pop7|74097|processing of precursor 7, ribonuclease P family, (S. cerevisiae)
mm9_v1_chr1_+_55293967_55294068	0.3974	HMX1.p2	BC132343|Mars2|212679|methionine-tRNA synthetase 2 (mitochondrial)	BC137739|Mars2|212679|methionine-tRNA synthetase 2 (mitochondrial)	NM_175439|Mars2|212679|methionine-tRNA synthetase 2 (mitochondrial)	BC099669|Mars2|212679|methionine-tRNA synthetase 2 (mitochondrial)	AK050196|Mars2|212679|methionine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr10_+_119645800_119645892	0.396457	HMX1.p2	BC027637|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK039270|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK153442|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK162942|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	AK006207|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4	NM_026617|Tmbim4|68212|transmembrane BAX inhibitor motif containing 4
mm9_v1_chr12_-_102137614_102137733	0.396087	HMX1.p2	AK154292|Gm10431|100038679|predicted gene 10431	NM_001177674|Gpr68|238377|G protein-coupled receptor 68
mm9_v1_chr5_-_65726802_65726885	0.394499	HMX1.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr8_+_122434697_122434814	0.394356	HMX1.p2	AK077453|Usp10|22224|ubiquitin specific peptidase 10	AK157970|Usp10|22224|ubiquitin specific peptidase 10	AK165156|Usp10|22224|ubiquitin specific peptidase 10	AK172443|Usp10|22224|ubiquitin specific peptidase 10	AK137015|Usp10|22224|ubiquitin specific peptidase 10	AK166243|Usp10|22224|ubiquitin specific peptidase 10	AK129083|Usp10|22224|ubiquitin specific peptidase 10	BC007134|Usp10|22224|ubiquitin specific peptidase 10	D84096|Usp10|22224|ubiquitin specific peptidase 10	NM_009462|Usp10|22224|ubiquitin specific peptidase 10	AK179830|Usp10|22224|ubiquitin specific peptidase 10
mm9_v1_chr12_+_83270349_83270493	0.393107	HMX1.p2	AK147591|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	BC095958|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1	AK078420|Sipa1l1|217692|signal-induced proliferation-associated 1 like 1
mm9_v1_chr1_-_21951497_21951661	0.392842	HMX1.p2	AF263836|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5	AY679158|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5
mm9_v1_chr13_+_73741384_73741748	0.392394	HMX1.p2	AK032295|Clptm1l|218335|CLPTM1-like	AK048357|Clptm1l|218335|CLPTM1-like	AK156203|Clptm1l|218335|CLPTM1-like	AK165939|Clptm1l|218335|CLPTM1-like	BC026562|Clptm1l|218335|CLPTM1-like	NM_146047|Clptm1l|218335|CLPTM1-like
mm9_v1_chr2_-_103143352_103143356	0.391337	HMX1.p2	NM_007914|Ehf|13661|ets homologous factor
mm9_v1_chr15_+_99803210_99803320	0.390095	HMX1.p2	NM_001024526|Larp4|207214|La ribonucleoprotein domain family, member 4	AK165392|Larp4|207214|La ribonucleoprotein domain family, member 4	AK172198|Larp4|207214|La ribonucleoprotein domain family, member 4	AK049756|Larp4|207214|La ribonucleoprotein domain family, member 4	BC075726|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr7_-_125999115_125999232	0.389649	HMX1.p2	BC055941|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	AK082978|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	NM_001168220|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	AK009230|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	AK083845|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene	AK166956|2310008H09Rik|66356|RIKEN cDNA 2310008H09 gene
mm9_v1_chr10_-_82085802_82085872	0.387144	HMX1.p2	BC038652|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	BC065417|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	AK004515|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	AK045413|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene
mm9_v1_chr1_-_53813191_53813277	0.386265	HMX1.p2	
mm9_v1_chr15_+_102111950_102112098	0.385938	HMX1.p2	AK178367|Mfsd5|106073|major facilitator superfamily domain containing 5
mm9_v1_chr11_-_70796432_70796469	0.385885	HMX1.p2	AK010601|C1qbp|12261|complement component 1, q subcomponent binding protein	AF300619|C1qbp|12261|complement component 1, q subcomponent binding protein	AJ001101|C1qbp|12261|complement component 1, q subcomponent binding protein
mm9_v1_chr8_+_34763918_34764151	0.382915	HMX1.p2	AK040136|Gsr|14782|glutathione reductase	X76341|Gsr|14782|glutathione reductase	AK159678|Gsr|14782|glutathione reductase	AK019177|Gsr|14782|glutathione reductase	AK159218|Gsr|14782|glutathione reductase	AK151063|Gsr|14782|glutathione reductase	AK151247|Gsr|14782|glutathione reductase	AK152873|Gsr|14782|glutathione reductase	AK084328|Gsr|14782|glutathione reductase	AK167393|Gsr|14782|glutathione reductase	AK151674|Gsr|14782|glutathione reductase
mm9_v1_chr11_-_120522148_120522225	0.379746	HMX1.p2	AK019987|Notum|77583|notum pectinacetylesterase homolog (Drosophila)	NM_175263|Notum|77583|notum pectinacetylesterase homolog (Drosophila)
mm9_v1_chr2_-_26300698_26300744	0.377626	HMX1.p2	AK157671|Sec16a|227648|SEC16 homolog A (S. cerevisiae)	AK162931|Sec16a|227648|SEC16 homolog A (S. cerevisiae)	NM_153125|Sec16a|227648|SEC16 homolog A (S. cerevisiae)
mm9_v1_chr11_-_82684643_82684651	0.377593	HMX1.p2	AK150213|Rffl|67338|ring finger and FYVE like domain containing protein	AK169393|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr11_+_45869506_45869586	0.375798	HMX1.p2	D50410|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	AK147217|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	AF019887|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC115767|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chrX_-_75098838_75098843	0.375576	HMX1.p2	AF005204|Pbsn|54192|probasin	NM_017471|Pbsn|54192|probasin
mm9_v1_chr10_+_61715185_61715185	0.374851	HMX1.p2	NM_009314|Tacr2|21337|tachykinin receptor 2	X62933|Tacr2|21337|tachykinin receptor 2
mm9_v1_chr11_-_100831819_100831899	0.373683	HMX1.p2	AK154132|Ptrf|19285|polymerase I and transcript release factor	BC116701|Ptrf|19285|polymerase I and transcript release factor	BC117527|Ptrf|19285|polymerase I and transcript release factor	AF036249|Ptrf|19285|polymerase I and transcript release factor
mm9_v1_chr10_+_12728252_12728328	0.373113	HMX1.p2	NM_175102|Sf3b5|66125|splicing factor 3b, subunit 5	BC006603|Sf3b5|66125|splicing factor 3b, subunit 5	AK010348|Sf3b5|66125|splicing factor 3b, subunit 5	AK003475|Sf3b5|66125|splicing factor 3b, subunit 5	AK009874|Sf3b5|66125|splicing factor 3b, subunit 5
mm9_v1_chr5_-_21371421_21371421	0.370898	HMX1.p2	AF529192|Slc26a5|80979|solute carrier family 26, member 5	NM_030727|Slc26a5|80979|solute carrier family 26, member 5
mm9_v1_chrX_-_152057864_152057869	0.37042	HMX1.p2	BC116313|Ptchd1|211612|patched domain containing 1	BC116312|Ptchd1|211612|patched domain containing 1	NM_001093750|Ptchd1|211612|patched domain containing 1
mm9_v1_chr1_-_135557461_135557461	0.369704	HMX1.p2	AK144981|Zbed6|667118|zinc finger, BED domain containing 6	NM_001166552|Zbed6|667118|zinc finger, BED domain containing 6
mm9_v1_chrX_+_30823249_30823249	0.368887	HMX1.p2	BC117726|4930408F14Rik|74851|RIKEN cDNA 4930408F14 gene	NM_029106|4930408F14Rik|74851|RIKEN cDNA 4930408F14 gene
mm9_v1_chr19_-_5894106_5894127	0.368528	HMX1.p2	BC055784|Tigd3|332359|tigger transposable element derived 3	NM_198634|Tigd3|332359|tigger transposable element derived 3	BC053500|Tigd3|332359|tigger transposable element derived 3
mm9_v1_chr9_+_51855254_51855279	0.367064	HMX1.p2	NM_001104616|Rdx|19684|radixin	AK162204|Rdx|19684|radixin
mm9_v1_chr10_+_53316720_53316974	0.367027	HMX1.p2	AK010210|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	NM_025541|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK012376|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK031513|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK088618|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK007804|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC027628|Asf1a|66403|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm9_v1_chr14_+_121310342_121310481	0.366634	HMX1.p2	AK161668|Ipo5|70572|importin 5	NM_023579|Ipo5|70572|importin 5	AK079134|Ipo5|70572|importin 5	AK049422|Ipo5|70572|importin 5	AK169664|Ipo5|70572|importin 5	AK053681|Ipo5|70572|importin 5	AK017701|Ipo5|70572|importin 5	AK167303|Ipo5|70572|importin 5	AF294327|Ipo5|70572|importin 5	BC052392|Ipo5|70572|importin 5
mm9_v1_chr3_-_29911982_29912077	0.366406	HMX1.p2	AK051098|Mecom|14013|MDS1 and EVI1 complex locus	BC076620|Mecom|14013|MDS1 and EVI1 complex locus
mm9_v1_chr2_-_164104007_164104044	0.365802	HMX1.p2	M35732|Svs4|20941|seminal vesicle secretory protein 4	AK020349|Svs4|20941|seminal vesicle secretory protein 4	BC115604|Svs4|20941|seminal vesicle secretory protein 4	BC115605|Svs4|20941|seminal vesicle secretory protein 4	NM_009300|Svs4|20941|seminal vesicle secretory protein 4
mm9_v1_chr17_-_46339543_46339578	0.364582	HMX1.p2	BC049159|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	BC128366|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	AK036296|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	NM_030715|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)	AB027128|Polh|80905|polymerase (DNA directed), eta (RAD 30 related)
mm9_v1_chr11_-_115971521_115971577	0.364496	HMX1.p2	AK031572|Trim47|217333|tripartite motif-containing 47	BC100317|Trim47|217333|tripartite motif-containing 47
mm9_v1_chr18_-_85120825_85120843	0.3643	HMX1.p2	AK168105|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK013281|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr6_-_72382995_72383001	0.363338	HMX1.p2	
mm9_v1_chr7_+_148646992_148647040	0.361287	HMX1.p2	BC048916|Efcab4a|213573|EF-hand calcium binding domain 4A	NM_001025103|Efcab4a|213573|EF-hand calcium binding domain 4A	BC098333|Efcab4a|213573|EF-hand calcium binding domain 4A
mm9_v1_chr3_+_107081775_107081924	0.360878	HMX1.p2	NM_026774|Hbxip|68576|hepatitis B virus x interacting protein	AK146289|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr17_-_80689815_80689815	0.359574	HMX1.p2	BC062952|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_001163759|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_198942|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr2_+_180317427_180317498	0.357878	HMX1.p2	AK052575|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC085320|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	AK038431|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	AK005551|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC042508|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC110993|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene	BC054431|1600027N09Rik|73247|RIKEN cDNA 1600027N09 gene
mm9_v1_chr14_-_68333897_68333897	0.356344	HMX1.p2	BC075682|Cdca2|108912|cell division cycle associated 2	NM_175384|Cdca2|108912|cell division cycle associated 2
mm9_v1_chr7_+_148401731_148401771	0.355741	HMX1.p2	AK010305|Rassf7|66985|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7	NM_025886|Rassf7|66985|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
mm9_v1_chr14_-_40286236_40286375	0.355608	HMX1.p2	AF010130|Nrg3|18183|neuregulin 3	NM_001190187|Nrg3|18183|neuregulin 3	NM_001190188|Nrg3|18183|neuregulin 3	NM_008734|Nrg3|18183|neuregulin 3
mm9_v1_chr16_+_33684551_33684609	0.354708	HMX1.p2	AK028518|Heg1|77446|HEG homolog 1 (zebrafish)	AK163128|Heg1|77446|HEG homolog 1 (zebrafish)	NM_175256|Heg1|77446|HEG homolog 1 (zebrafish)
mm9_v1_chr9_-_20871536_20871536	0.354662	HMX1.p2	DQ286956|Zglp1|100009600|zinc finger, GATA-like protein 1	NM_001103168|Zglp1|100009600|zinc finger, GATA-like protein 1
mm9_v1_chr6_-_115685120_115685120	0.35406	HMX1.p2	NM_001168258|Tmem40|94346|transmembrane protein 40
mm9_v1_chr4_-_77857594_77857662	0.353759	HMX1.p2	AK086248|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr15_-_10488393_10488422	0.353136	HMX1.p2	AK015027|Ttc23l|75777|tetratricopeptide repeat domain 23-like	BC132384|Ttc23l|75777|tetratricopeptide repeat domain 23-like	BC145852|Ttc23l|75777|tetratricopeptide repeat domain 23-like	NM_029430|Ttc23l|75777|tetratricopeptide repeat domain 23-like
mm9_v1_chr17_+_23816331_23816354	0.352789	HMX1.p2	AK010560|Cldn6|54419|claudin 6	NM_018777|Cldn6|54419|claudin 6	AK010682|Cldn6|54419|claudin 6	BC050138|Cldn6|54419|claudin 6	BC005718|Cldn6|54419|claudin 6
mm9_v1_chr2_-_155652383_155652474	0.351818	HMX1.p2	BC024442|Eif6|16418|eukaryotic translation initiation factor 6	AK018313|Eif6|16418|eukaryotic translation initiation factor 6	AF047046|Eif6|16418|eukaryotic translation initiation factor 6	AK151559|Eif6|16418|eukaryotic translation initiation factor 6	AK167422|Eif6|16418|eukaryotic translation initiation factor 6	AK003447|Eif6|16418|eukaryotic translation initiation factor 6	AK151102|Eif6|16418|eukaryotic translation initiation factor 6	AK152093|Eif6|16418|eukaryotic translation initiation factor 6	AK152215|Eif6|16418|eukaryotic translation initiation factor 6	AK152832|Eif6|16418|eukaryotic translation initiation factor 6	AK159157|Eif6|16418|eukaryotic translation initiation factor 6	AK012218|Eif6|16418|eukaryotic translation initiation factor 6	AK088707|Eif6|16418|eukaryotic translation initiation factor 6	AK005384|Eif6|16418|eukaryotic translation initiation factor 6	AK007594|Eif6|16418|eukaryotic translation initiation factor 6	AK134364|Eif6|16418|eukaryotic translation initiation factor 6	AK150720|Eif6|16418|eukaryotic translation initiation factor 6	AK150400|Eif6|16418|eukaryotic translation initiation factor 6	AK150931|Eif6|16418|eukaryotic translation initiation factor 6	AK151089|Eif6|16418|eukaryotic translation initiation factor 6	AK151644|Eif6|16418|eukaryotic translation initiation factor 6	AK168257|Eif6|16418|eukaryotic translation initiation factor 6	AK152416|Eif6|16418|eukaryotic translation initiation factor 6	AF108462|Eif6|16418|eukaryotic translation initiation factor 6
mm9_v1_chr2_-_33226946_33226968	0.350419	HMX1.p2	BC072656|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1	AK170248|Ralgps1|241308|Ral GEF with PH domain and SH3 binding motif 1
mm9_v1_chr19_+_25580195_25580343	0.3495	HMX1.p2	AL133300|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	AY169785|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	AY169786|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	AY169787|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	AY943925|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	NM_015826|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	DQ530630|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	AF202778|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	BC125474|Dmrt1|50796|doublesex and mab-3 related transcription factor 1	AB221653|Dmrt1|50796|doublesex and mab-3 related transcription factor 1
mm9_v1_chr15_+_89041957_89042070	0.349135	HMX1.p2	AK084684|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_026813|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_027805|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK083335|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	BC024879|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK018403|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2
mm9_v1_chr19_-_15999377_15999548	0.348835	HMX1.p2	AK035361|Psat1|107272|phosphoserine aminotransferase 1	AK162609|Psat1|107272|phosphoserine aminotransferase 1	AK167029|Psat1|107272|phosphoserine aminotransferase 1	AF259674|Psat1|107272|phosphoserine aminotransferase 1	AK145216|Psat1|107272|phosphoserine aminotransferase 1	AK168098|Psat1|107272|phosphoserine aminotransferase 1	AK169370|Psat1|107272|phosphoserine aminotransferase 1	AK145672|Psat1|107272|phosphoserine aminotransferase 1	AK166880|Psat1|107272|phosphoserine aminotransferase 1	AK090108|Psat1|107272|phosphoserine aminotransferase 1	AK049855|Psat1|107272|phosphoserine aminotransferase 1	AK168216|Psat1|107272|phosphoserine aminotransferase 1	AK167044|Psat1|107272|phosphoserine aminotransferase 1	BC004827|Psat1|107272|phosphoserine aminotransferase 1	NM_177420|Psat1|107272|phosphoserine aminotransferase 1	AK032487|Psat1|107272|phosphoserine aminotransferase 1
mm9_v1_chr16_+_17898729_17898806	0.343318	HMX1.p2	NM_009436|Tssk2|22115|testis-specific serine kinase 2	BC061175|Tssk2|22115|testis-specific serine kinase 2	BC049618|Tssk2|22115|testis-specific serine kinase 2	AF019926|Tssk2|22115|testis-specific serine kinase 2
mm9_v1_chr1_-_186556046_186556064	0.342998	HMX1.p2	AK154090|Hlx|15284|H2.0-like homeobox
mm9_v1_chr18_+_32399979_32400013	0.342925	HMX1.p2	AK151188|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK152347|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK152988|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	AK154745|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	NM_133658|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	S71186|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC026575|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC022956|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3	BC016595|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm9_v1_chr11_+_115836022_115836269	0.342631	HMX1.p2	L04678|Itgb4|192897|integrin beta 4	AK147424|Itgb4|192897|integrin beta 4	NM_001005608|Itgb4|192897|integrin beta 4	NM_133663|Itgb4|192897|integrin beta 4	AK048888|Itgb4|192897|integrin beta 4
mm9_v1_chr4_+_61947463_61947577	0.342144	HMX1.p2	NM_025286|Slc31a2|20530|solute carrier family 31, member 2	AK008473|Slc31a2|20530|solute carrier family 31, member 2	BC099447|Slc31a2|20530|solute carrier family 31, member 2	AK007579|Slc31a2|20530|solute carrier family 31, member 2	AK152812|Slc31a2|20530|solute carrier family 31, member 2	AK003269|Slc31a2|20530|solute carrier family 31, member 2	AK151612|Slc31a2|20530|solute carrier family 31, member 2	BC029183|Slc31a2|20530|solute carrier family 31, member 2
mm9_v1_chrX_+_126284271_126284381	0.341499	HMX1.p2	AK153986|Diap2|54004|diaphanous homolog 2 (Drosophila)	NM_172493|Diap2|54004|diaphanous homolog 2 (Drosophila)	AK088648|Diap2|54004|diaphanous homolog 2 (Drosophila)	AY312280|Diap2|54004|diaphanous homolog 2 (Drosophila)	BC100759|Diap2|54004|diaphanous homolog 2 (Drosophila)
mm9_v1_chr9_-_121668905_121669060	0.340937	HMX1.p2	AK089135|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK080675|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK158237|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK162861|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene	AK149318|E530011L22Rik|320301|RIKEN cDNA E530011L22 gene
mm9_v1_chr12_-_80190607_80190656	0.340405	HMX1.p2	BC086806|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK030744|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK020902|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	AK167892|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H	NM_029988|Pigh|110417|phosphatidylinositol glycan anchor biosynthesis, class H
mm9_v1_chr7_+_108966826_108966826	0.34024	HMX1.p2	NM_008887|Phox2a|11859|paired-like homeobox 2a
mm9_v1_chr1_-_95949098_95949129	0.339148	HMX1.p2	BC119179|Pdcd1|18566|programmed cell death 1	BC120602|Pdcd1|18566|programmed cell death 1	AK039828|Pdcd1|18566|programmed cell death 1	NM_008798|Pdcd1|18566|programmed cell death 1	X67914|Pdcd1|18566|programmed cell death 1
mm9_v1_chr15_-_98558560_98558628	0.337778	HMX1.p2	BC021345|Fkbp11|66120|FK506 binding protein 11	BC037596|Fkbp11|66120|FK506 binding protein 11	AK019132|Fkbp11|66120|FK506 binding protein 11	BC002311|Fkbp11|66120|FK506 binding protein 11	BC022900|Fkbp11|66120|FK506 binding protein 11	AK007813|Fkbp11|66120|FK506 binding protein 11	AK003331|Fkbp11|66120|FK506 binding protein 11	NM_024169|Fkbp11|66120|FK506 binding protein 11
mm9_v1_chr17_+_8627287_8627315	0.337602	HMX1.p2	NM_009309|T|20997|brachyury	X51683|T|20997|brachyury	BC120807|T|20997|brachyury
mm9_v1_chr8_-_41372306_41372306	0.336573	HMX1.p2	AK052233|Fgf20|80857|fibroblast growth factor 20	NM_030610|Fgf20|80857|fibroblast growth factor 20
mm9_v1_chr3_+_41408529_41408643	0.336509	HMX1.p2	BC038026|Phf17|269424|PHD finger protein 17
mm9_v1_chr10_-_30338152_30338232	0.335812	HMX1.p2	AK027974|Hint3|66847|histidine triad nucleotide binding protein 3	BC025065|Hint3|66847|histidine triad nucleotide binding protein 3	NM_025798|Hint3|66847|histidine triad nucleotide binding protein 3	AY040768|Hint3|66847|histidine triad nucleotide binding protein 3	AK007758|Hint3|66847|histidine triad nucleotide binding protein 3
mm9_v1_chr2_-_179960563_179960563	0.332884	HMX1.p2	AJ293593|Lama5|16776|laminin, alpha 5	NM_001081171|Lama5|16776|laminin, alpha 5
mm9_v1_chr19_-_36131650_36131849	0.332882	HMX1.p2	AK138150|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	FM178515|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	FM178516|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	BC116986|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	Z23107|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	AK139197|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7	NM_008315|Htr7|15566|5-hydroxytryptamine (serotonin) receptor 7
mm9_v1_chr1_+_173489323_173489455	0.331808	HMX1.p2	AK089530|Cd244|18106|CD244 natural killer cell receptor 2B4	AK171544|Cd244|18106|CD244 natural killer cell receptor 2B4	NM_018729|Cd244|18106|CD244 natural killer cell receptor 2B4	AK170167|Cd244|18106|CD244 natural killer cell receptor 2B4	AF082803|Cd244|18106|CD244 natural killer cell receptor 2B4	L19057|Cd244|18106|CD244 natural killer cell receptor 2B4	AF184208|Cd244|18106|CD244 natural killer cell receptor 2B4	AF234830|Cd244|18106|CD244 natural killer cell receptor 2B4	AK137505|Cd244|18106|CD244 natural killer cell receptor 2B4	AK155548|Cd244|18106|CD244 natural killer cell receptor 2B4	AF234831|Cd244|18106|CD244 natural killer cell receptor 2B4	BC145067|Cd244|18106|CD244 natural killer cell receptor 2B4	BC150692|LOC677008|677008|natural killer cell receptor 2B4-like	AB196800|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196801|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196802|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196803|Cd244|18106|CD244 natural killer cell receptor 2B4
mm9_v1_chr6_+_87728129_87728134	0.331658	HMX1.p2	AB007464|Gp9|54368|glycoprotein 9 (platelet)	NM_018762|Gp9|54368|glycoprotein 9 (platelet)	BC111106|Gp9|54368|glycoprotein 9 (platelet)
mm9_v1_chr11_-_88922061_88922089	0.331187	HMX1.p2	AK147841|Dgke|56077|diacylglycerol kinase, epsilon	NM_019505|Dgke|56077|diacylglycerol kinase, epsilon
mm9_v1_chrX_-_3547090_3547090	0.331088	HMX1.p2	BC117726|4930408F14Rik|74851|RIKEN cDNA 4930408F14 gene	NM_029106|4930408F14Rik|74851|RIKEN cDNA 4930408F14 gene
mm9_v1_chr3_-_90269648_90269831	0.329795	HMX1.p2	BC139767|Npr1|18160|natriuretic peptide receptor 1	BC110659|Npr1|18160|natriuretic peptide receptor 1	NM_008727|Npr1|18160|natriuretic peptide receptor 1
mm9_v1_chr14_+_56210544_56210720	0.329656	HMX1.p2	AK156320|Rnf31|268749|ring finger protein 31	AK157962|Rnf31|268749|ring finger protein 31	BC057595|Rnf31|268749|ring finger protein 31	NM_194346|Rnf31|268749|ring finger protein 31	BC031509|Rnf31|268749|ring finger protein 31	AY283085|Rnf31|268749|ring finger protein 31
mm9_v1_chr15_+_74551611_74551685	0.32879	HMX1.p2	BC047266|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene	NM_198607|4930572J05Rik|223626|RIKEN cDNA 4930572J05 gene
mm9_v1_chr11_-_107331865_107332065	0.327493	HMX1.p2	BC082333|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	BC108351|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AB077281|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK153625|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171918|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK172137|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	NM_145823|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1	AK171340|Pitpnc1|71795|phosphatidylinositol transfer protein, cytoplasmic 1
mm9_v1_chr17_+_49071906_49072030	0.326978	HMX1.p2	BC139418|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	NM_027452|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK122476|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2	AK044375|Lrfn2|70530|leucine rich repeat and fibronectin type III domain containing 2
mm9_v1_chr5_-_135422795_135422804	0.326969	HMX1.p2	AK162721|Cldn4|12740|claudin 4	AK145152|Cldn4|12740|claudin 4	NM_009903|Cldn4|12740|claudin 4
mm9_v1_chr3_+_107081927_107081986	0.326198	HMX1.p2	AK003358|Hbxip|68576|hepatitis B virus x interacting protein	BC028547|Hbxip|68576|hepatitis B virus x interacting protein
mm9_v1_chr15_+_88650115_88650124	0.325269	HMX1.p2	BC047370|Creld2|76737|cysteine-rich with EGF-like domains 2
mm9_v1_chr2_+_139503913_139503986	0.325091	HMX1.p2	AK077398|Ism1|319909|isthmin 1 homolog (zebrafish)	NM_001126490|Ism1|319909|isthmin 1 homolog (zebrafish)
mm9_v1_chr11_+_120494714_120494741	0.324783	HMX1.p2	
mm9_v1_chr9_+_45127182_45127182	0.323435	HMX1.p2	BC085323|Tmprss13|214531|transmembrane protease, serine 13	NM_001013373|Tmprss13|214531|transmembrane protease, serine 13
mm9_v1_chr11_-_116704485_116704688	0.323174	HMX1.p2	EF527405|Jmjd6|107817|jumonji domain containing 6	BC006067|Jmjd6|107817|jumonji domain containing 6	BC011503|Jmjd6|107817|jumonji domain containing 6	AK122317|Jmjd6|107817|jumonji domain containing 6	AF304118|Jmjd6|107817|jumonji domain containing 6
mm9_v1_chr11_+_67466129_67466154	0.321637	HMX1.p2	AK172943|Gas7|14457|growth arrest specific 7
mm9_v1_chr4_+_86394436_86394546	0.321411	HMX1.p2	AK155220|Dennd4c|329877|DENN/MADD domain containing 4C	NM_001081014|Dennd4c|329877|DENN/MADD domain containing 4C	NM_184088|Dennd4c|329877|DENN/MADD domain containing 4C	AK154950|Dennd4c|329877|DENN/MADD domain containing 4C
mm9_v1_chr2_-_119584234_119584260	0.320908	HMX1.p2	X07984|Ltk|17005|leukocyte tyrosine kinase	X52621|Ltk|17005|leukocyte tyrosine kinase	BC055898|Ltk|17005|leukocyte tyrosine kinase	AK157478|Ltk|17005|leukocyte tyrosine kinase	BC047138|Ltk|17005|leukocyte tyrosine kinase	NM_008523|Ltk|17005|leukocyte tyrosine kinase	NM_206941|Ltk|17005|leukocyte tyrosine kinase
mm9_v1_chr7_-_80703275_80703327	0.318446	HMX1.p2	AK140938|1810026B05Rik|69170|RIKEN cDNA 1810026B05 gene
mm9_v1_chr7_+_13483153_13483228	0.318006	HMX1.p2	AK052559|Zscan22|232878|zinc finger and SCAN domain containing 22	AK085207|Zscan22|232878|zinc finger and SCAN domain containing 22	NM_001001447|Zscan22|232878|zinc finger and SCAN domain containing 22	AK163694|Zscan22|232878|zinc finger and SCAN domain containing 22	AK078591|Zscan22|232878|zinc finger and SCAN domain containing 22	BC026676|Zscan22|232878|zinc finger and SCAN domain containing 22
mm9_v1_chr8_+_107788547_107788600	0.317888	HMX1.p2	NM_015821|Fbxl8|50788|F-box and leucine-rich repeat protein 8	AK053206|Fbxl8|50788|F-box and leucine-rich repeat protein 8	AK155194|Fbxl8|50788|F-box and leucine-rich repeat protein 8	AK170367|Fbxl8|50788|F-box and leucine-rich repeat protein 8
mm9_v1_chr8_-_4217275_4217311	0.31684	HMX1.p2	BC068157|BC068157|73072|cDNA sequence BC068157	NM_207203|BC068157|73072|cDNA sequence BC068157
mm9_v1_chr5_-_136646451_136646559	0.316243	HMX1.p2	BC115648|Orai2|269717|ORAI calcium release-activated calcium modulator 2	BC115649|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK195764|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK215306|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK079619|Orai2|269717|ORAI calcium release-activated calcium modulator 2	BC066070|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK087038|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK036013|Orai2|269717|ORAI calcium release-activated calcium modulator 2	AK042940|Orai2|269717|ORAI calcium release-activated calcium modulator 2	NM_178751|Orai2|269717|ORAI calcium release-activated calcium modulator 2
mm9_v1_chr5_-_77738960_77739110	0.316108	HMX1.p2	AK139955|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK172681|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AB041537|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK017793|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK128920|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	BC017154|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK163935|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK019975|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK011533|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	AK157246|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene	NM_019836|2610024G14Rik|56412|RIKEN cDNA 2610024G14 gene
mm9_v1_chr3_-_96097855_96097923	0.315767	HMX1.p2	BC025535|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143154|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143155|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143156|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143157|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143158|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143159|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143160|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143161|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143162|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143163|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143164|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143165|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143166|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143167|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143168|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143169|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143170|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143171|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143172|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143173|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143174|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143175|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143176|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143177|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143178|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143179|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143180|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143181|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143186|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143187|Fcgr1|14129|Fc receptor, IgG, high affinity I	AF143188|Fcgr1|14129|Fc receptor, IgG, high affinity I	X70980|Fcgr1|14129|Fc receptor, IgG, high affinity I	M31314|Fcgr1|14129|Fc receptor, IgG, high affinity I	AK033874|Fcgr1|14129|Fc receptor, IgG, high affinity I	NM_010186|Fcgr1|14129|Fc receptor, IgG, high affinity I
mm9_v1_chr11_+_59120429_59120467	0.314975	HMX1.p2	AK087490|Wnt9a|216795|wingless-type MMTV integration site 9A	NM_139298|Wnt9a|216795|wingless-type MMTV integration site 9A	BC066165|Wnt9a|216795|wingless-type MMTV integration site 9A	AB072311|Wnt9a|216795|wingless-type MMTV integration site 9A
mm9_v1_chr5_-_111209468_111209636	0.314748	HMX1.p2	BC021446|Pus1|56361|pseudouridine synthase 1	BC034359|Pus1|56361|pseudouridine synthase 1	AB041563|Pus1|56361|pseudouridine synthase 1	AK089258|Pus1|56361|pseudouridine synthase 1	NM_001025561|Pus1|56361|pseudouridine synthase 1	NM_019700|Pus1|56361|pseudouridine synthase 1	NM_001025562|Pus1|56361|pseudouridine synthase 1	AK161521|Pus1|56361|pseudouridine synthase 1
mm9_v1_chr7_-_20535921_20536091	0.314019	HMX1.p2	AK088927|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	BC139455|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	BC139458|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	AK008696|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	AK033677|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene	NM_027308|2210010C17Rik|70080|RIKEN cDNA 2210010C17 gene
mm9_v1_chr15_+_102348622_102348920	0.312595	HMX1.p2	AK143188|Tarbp2|21357|TAR (HIV) RNA binding protein 2	NM_009319|Tarbp2|21357|TAR (HIV) RNA binding protein 2	AK144205|Tarbp2|21357|TAR (HIV) RNA binding protein 2	BC053432|Tarbp2|21357|TAR (HIV) RNA binding protein 2	U79962|Tarbp2|21357|TAR (HIV) RNA binding protein 2	BC002028|Tarbp2|21357|TAR (HIV) RNA binding protein 2
mm9_v1_chr15_+_44450689_44451235	0.312257	HMX1.p2	BC026717|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AK160149|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AK159499|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AY009091|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC108397|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	NM_019480|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC119118|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC119120|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	BC144740|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9
mm9_v1_chr3_+_51028796_51028896	0.312116	HMX1.p2	AK084516|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AK041713|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)	AF199491|Ccrn4l|12457|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
mm9_v1_chr11_-_70796471_70796535	0.31149	HMX1.p2	AK010746|C1qbp|12261|complement component 1, q subcomponent binding protein	BC038075|C1qbp|12261|complement component 1, q subcomponent binding protein	AK169764|C1qbp|12261|complement component 1, q subcomponent binding protein	AK011868|C1qbp|12261|complement component 1, q subcomponent binding protein	NM_007573|C1qbp|12261|complement component 1, q subcomponent binding protein
mm9_v1_chr15_+_73578771_73578842	0.309885	HMX1.p2	AK143702|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK172192|Ptp4a3|19245|protein tyrosine phosphatase 4a3	AK014601|Ptp4a3|19245|protein tyrosine phosphatase 4a3
mm9_v1_chr3_+_135148555_135148633	0.308731	HMX1.p2	AF306557|Manba|110173|mannosidase, beta A, lysosomal	NM_027288|Manba|110173|mannosidase, beta A, lysosomal	AK036505|Manba|110173|mannosidase, beta A, lysosomal	AK037629|Manba|110173|mannosidase, beta A, lysosomal	AK166340|Manba|110173|mannosidase, beta A, lysosomal	AK170290|Manba|110173|mannosidase, beta A, lysosomal	AK047057|Manba|110173|mannosidase, beta A, lysosomal	AK171416|Manba|110173|mannosidase, beta A, lysosomal	AK166022|Manba|110173|mannosidase, beta A, lysosomal	AK154172|Manba|110173|mannosidase, beta A, lysosomal	AK142165|Manba|110173|mannosidase, beta A, lysosomal	BC031409|Manba|110173|mannosidase, beta A, lysosomal
mm9_v1_chr11_-_99442304_99442329	0.308604	HMX1.p2	BC147095|Krtap1-5|69664|keratin associated protein 1-5	BC147096|Krtap1-5|69664|keratin associated protein 1-5	AK009782|Krtap1-5|69664|keratin associated protein 1-5	NM_027157|Krtap1-5|69664|keratin associated protein 1-5
mm9_v1_chr3_+_27081918_27081998	0.308445	HMX1.p2	AK128968|Nceh1|320024|arylacetamide deacetylase-like 1	AK038691|Nceh1|320024|arylacetamide deacetylase-like 1	AK045363|Nceh1|320024|arylacetamide deacetylase-like 1	AK085767|Nceh1|320024|arylacetamide deacetylase-like 1	NM_178772|Nceh1|320024|arylacetamide deacetylase-like 1	AK135837|Nceh1|320024|arylacetamide deacetylase-like 1	BC082569|Nceh1|320024|arylacetamide deacetylase-like 1	AK173158|Nceh1|320024|arylacetamide deacetylase-like 1	AK034339|Nceh1|320024|arylacetamide deacetylase-like 1
mm9_v1_chr6_-_49164469_49164732	0.307315	HMX1.p2	AB046173|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	BC045138|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	BC049082|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK011797|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK088465|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3	AK011689|Igf2bp3|140488|insulin-like growth factor 2 mRNA binding protein 3
mm9_v1_chr8_-_108457731_108457761	0.305355	HMX1.p2	AK220246|Ctrl|109660|chymotrypsin-like	AK007333|Ctrl|109660|chymotrypsin-like	AK009019|Ctrl|109660|chymotrypsin-like	BC087918|Ctrl|109660|chymotrypsin-like	AB016228|Ctrl|109660|chymotrypsin-like	NM_023182|Ctrl|109660|chymotrypsin-like
mm9_v1_chr11_-_77421308_77421363	0.305264	HMX1.p2	AK143530|Taok1|216965|TAO kinase 1	NM_144825|Taok1|216965|TAO kinase 1
mm9_v1_chr13_+_118009546_118009573	0.305237	HMX1.p2	AK010733|Emb|13723|embigin	AK088480|Emb|13723|embigin	AK148449|Emb|13723|embigin	AK148540|Emb|13723|embigin	AK161679|Emb|13723|embigin	AK166602|Emb|13723|embigin	J03535|Emb|13723|embigin	AK150625|Emb|13723|embigin	BC014858|Emb|13723|embigin
mm9_v1_chr18_+_67247937_67247965	0.304739	HMX1.p2	AK043665|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	AK035952|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm9_v1_chr10_-_82085891_82085972	0.304149	HMX1.p2	NM_001135567|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	NM_001135568|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	NM_001135569|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene
mm9_v1_chr4_+_134024234_134024333	0.303957	HMX1.p2	NM_019641|Stmn1|16765|stathmin 1	AB064953|Stmn1|16765|stathmin 1	AK002606|Stmn1|16765|stathmin 1	AK012231|Stmn1|16765|stathmin 1	AK012347|Stmn1|16765|stathmin 1	AK014108|Stmn1|16765|stathmin 1	AK088628|Stmn1|16765|stathmin 1	AK013302|Stmn1|16765|stathmin 1	BC010581|Stmn1|16765|stathmin 1	BC031831|Stmn1|16765|stathmin 1	BC054396|Stmn1|16765|stathmin 1
mm9_v1_chr4_+_11631592_11631656	0.302636	HMX1.p2	AK157655|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK158393|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK168401|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	NM_010276|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK153999|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK169699|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	U13053|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	BC029668|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)	AK171336|Gem|14579|GTP binding protein (gene overexpressed in skeletal muscle)
mm9_v1_chr2_+_153567020_153567113	0.301869	HMX1.p2	NM_007896|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC043333|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK154245|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK013626|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	U51196|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	AK146206|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC052728|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1	BC064444|Mapre1|13589|microtubule-associated protein, RP/EB family, member 1
mm9_v1_chr5_+_135663096_135663289	0.300797	HMX1.p2	AK017894|Baz1b|22385|bromodomain adjacent to zinc finger domain, 1B	NM_011714|Baz1b|22385|bromodomain adjacent to zinc finger domain, 1B	AF084480|Baz1b|22385|bromodomain adjacent to zinc finger domain, 1B	BC141399|Baz1b|22385|bromodomain adjacent to zinc finger domain, 1B	BC171975|Baz1b|22385|bromodomain adjacent to zinc finger domain, 1B
mm9_v1_chr19_-_7351647_7351726	0.300579	HMX1.p2	AK194221|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK218760|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr8_+_107788611_107788637	0.298566	HMX1.p2	AF176523|Fbxl8|50788|F-box and leucine-rich repeat protein 8
mm9_v1_chr3_+_90472990_90473006	0.298361	HMX1.p2	AK157837|S100a8|20201|S100 calcium binding protein A8 (calgranulin A)	NM_013650|S100a8|20201|S100 calcium binding protein A8 (calgranulin A)	BC078629|S100a8|20201|S100 calcium binding protein A8 (calgranulin A)	S57123|S100a8|20201|S100 calcium binding protein A8 (calgranulin A)
mm9_v1_chr2_-_128513089_128513155	0.297427	HMX1.p2	BC057201|Anapc1|17222|anaphase promoting complex subunit 1	AK149762|Anapc1|17222|anaphase promoting complex subunit 1	AK052404|Anapc1|17222|anaphase promoting complex subunit 1	AK053383|Anapc1|17222|anaphase promoting complex subunit 1	AK090134|Anapc1|17222|anaphase promoting complex subunit 1	AK054305|Anapc1|17222|anaphase promoting complex subunit 1	BC139002|Anapc1|17222|anaphase promoting complex subunit 1	BC145492|Anapc1|17222|anaphase promoting complex subunit 1	AK164804|Anapc1|17222|anaphase promoting complex subunit 1	X80169|Anapc1|17222|anaphase promoting complex subunit 1	AK077847|Anapc1|17222|anaphase promoting complex subunit 1	NM_008569|Anapc1|17222|anaphase promoting complex subunit 1
mm9_v1_chr19_+_4003320_4003386	0.297387	HMX1.p2	AK084565|Doc2g|60425|double C2, gamma	BC061104|Doc2g|60425|double C2, gamma	NM_021791|Doc2g|60425|double C2, gamma	AB046665|Doc2g|60425|double C2, gamma
mm9_v1_chr2_+_91762334_91762347	0.296491	HMX1.p2	NM_007699|Chrm4|12672|cholinergic receptor, muscarinic 4
mm9_v1_chr5_+_115956809_115956836	0.296113	HMX1.p2	AK206113|Pxn|19303|paxillin	AK214527|Pxn|19303|paxillin
mm9_v1_chr5_-_110771973_110772012	0.295738	HMX1.p2	AB094663|P2rx2|231602|purinergic receptor P2X, ligand-gated ion channel, 2	AB094664|P2rx2|231602|purinergic receptor P2X, ligand-gated ion channel, 2	AK158334|P2rx2|231602|purinergic receptor P2X, ligand-gated ion channel, 2	AK141196|P2rx2|231602|purinergic receptor P2X, ligand-gated ion channel, 2
mm9_v1_chr8_-_108223598_108223720	0.295601	HMX1.p2	BC004682|Acd|497652|adrenocortical dysplasia
mm9_v1_chr15_+_79178408_79178527	0.295553	HMX1.p2	AK145835|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr8_-_72877137_72877227	0.295538	HMX1.p2	AK148196|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	BC056442|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	NM_001122829|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	NM_030680|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)	AF182947|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)
mm9_v1_chr7_+_29573987_29573995	0.294982	HMX1.p2	BC044761|Rinl|320435|Ras and Rab interactor-like	BC046530|Rinl|320435|Ras and Rab interactor-like	NM_177158|Rinl|320435|Ras and Rab interactor-like	AK020687|Rinl|320435|Ras and Rab interactor-like	AK030993|Rinl|320435|Ras and Rab interactor-like
mm9_v1_chr10_-_22539951_22539979	0.294919	HMX1.p2	AK161795|Tcf21|21412|transcription factor 21	AK135423|Tcf21|21412|transcription factor 21
mm9_v1_chr13_+_32894609_32894767	0.294735	HMX1.p2	AF208046|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr8_+_61390551_61390637	0.293026	HMX1.p2	BC030500|BC030500|234290|cDNA sequence BC030500	NM_173411|BC030500|234290|cDNA sequence BC030500
mm9_v1_chr5_-_115594042_115594212	0.292743	HMX1.p2	BC005740|Mlec|109154|malectin	BC025208|Mlec|109154|malectin
mm9_v1_chr2_-_37286367_37286438	0.292545	HMX1.p2	BC032933|Zbtb6|241322|zinc finger and BTB domain containing 6	AK044125|Zbtb6|241322|zinc finger and BTB domain containing 6	AK050827|Zbtb6|241322|zinc finger and BTB domain containing 6	NM_146253|Zbtb6|241322|zinc finger and BTB domain containing 6
mm9_v1_chr12_-_58646914_58647013	0.292169	HMX1.p2	X74936|Foxa1|15375|forkhead box A1	U44752|Foxa1|15375|forkhead box A1
mm9_v1_chrX_+_63906333_63906333	0.292126	HMX1.p2	BC111888|Slitrk2|245450|SLIT and NTRK-like family, member 2	BC112406|Slitrk2|245450|SLIT and NTRK-like family, member 2	NM_198863|Slitrk2|245450|SLIT and NTRK-like family, member 2
mm9_v1_chr13_-_53024983_53025057	0.291802	HMX1.p2	BC026525|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK134886|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK019978|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003219|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK003929|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK169661|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	BC049597|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	NM_016709|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase	AK147855|Auh|11992|AU RNA binding protein/enoyl-coenzyme A hydratase
mm9_v1_chr15_+_99803329_99803358	0.290831	HMX1.p2	AK139909|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr16_-_38525341_38525620	0.290152	HMX1.p2	AK076379|Poglut1|224143|protein O-glucosyltransferase 1
mm9_v1_chr4_-_126645129_126645179	0.289029	HMX1.p2	AK148366|Zmym4|67785|zinc finger, MYM-type 4	NM_001114399|Zmym4|67785|zinc finger, MYM-type 4
mm9_v1_chrX_+_20194628_20194628	0.288474	HMX1.p2	AK153736|Rbm10|236732|RNA binding motif protein 10	NM_001167775|Rbm10|236732|RNA binding motif protein 10
mm9_v1_chr13_-_4149873_4149891	0.287878	HMX1.p2	BC034259|Akr1c18|105349|aldo-keto reductase family 1, member C18	AB059565|Akr1c18|105349|aldo-keto reductase family 1, member C18	NM_134066|Akr1c18|105349|aldo-keto reductase family 1, member C18	AK153898|Akr1c18|105349|aldo-keto reductase family 1, member C18
mm9_v1_chr5_-_99681835_99681949	0.287852	HMX1.p2	AK028756|Rasgef1b|320292|RasGEF domain family, member 1B	BC052726|Rasgef1b|320292|RasGEF domain family, member 1B	AK090085|Rasgef1b|320292|RasGEF domain family, member 1B	AK149812|Rasgef1b|320292|RasGEF domain family, member 1B	AY129963|Rasgef1b|320292|RasGEF domain family, member 1B	BC050858|Rasgef1b|320292|RasGEF domain family, member 1B	NM_145839|Rasgef1b|320292|RasGEF domain family, member 1B	NM_181318|Rasgef1b|320292|RasGEF domain family, member 1B
mm9_v1_chr14_+_70167278_70167338	0.287331	HMX1.p2	AK050753|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	NM_020275|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK080069|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK145730|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AK154993|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	BC065141|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b	AB031081|Tnfrsf10b|21933|tumor necrosis factor receptor superfamily, member 10b
mm9_v1_chr5_-_33994944_33995017	0.287316	HMX1.p2	BC029631|Slbp|20492|stem-loop binding protein	NM_009193|Slbp|20492|stem-loop binding protein	U75680|Slbp|20492|stem-loop binding protein	BC025113|Slbp|20492|stem-loop binding protein	AK162121|Slbp|20492|stem-loop binding protein	AK154053|Slbp|20492|stem-loop binding protein	AK131729|Slbp|20492|stem-loop binding protein	AK016826|Slbp|20492|stem-loop binding protein
mm9_v1_chr10_-_106922986_106923189	0.286474	HMX1.p2	X56182|Myf5|17877|myogenic factor 5	BC132144|Myf5|17877|myogenic factor 5	AK044894|Myf5|17877|myogenic factor 5	AK083402|Myf5|17877|myogenic factor 5	NM_008656|Myf5|17877|myogenic factor 5
mm9_v1_chr9_-_4309446_4309517	0.284378	HMX1.p2	AK013111|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076099|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK010557|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK028700|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC038013|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC049851|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK008554|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	BC030043|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK144671|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK076866|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK014188|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK029523|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK081818|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK031766|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK088977|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	AK007737|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	NM_026276|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
mm9_v1_chr2_-_69723602_69723604	0.284243	HMX1.p2	BC027547|Mettl5|75422|methyltransferase like 5
mm9_v1_chr4_-_143752454_143752553	0.283425	HMX1.p2	AY573563|Oog3|100012|oogenesin 3	BC053700|Oog3|100012|oogenesin 3	AK136030|Oog3|100012|oogenesin 3	NM_201258|Oog3|100012|oogenesin 3
mm9_v1_chr16_-_85550617_85550674	0.283421	HMX1.p2	BC099957|Cyyr1|224405|cysteine and tyrosine-rich protein 1	NM_144853|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK031840|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AY061854|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK171936|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK163137|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK158088|Cyyr1|224405|cysteine and tyrosine-rich protein 1
mm9_v1_chr2_+_167363769_167363826	0.283196	HMX1.p2	X67253|Snai1|20613|snail homolog 1 (Drosophila)	M95604|Snai1|20613|snail homolog 1 (Drosophila)	CT010204|Snai1|20613|snail homolog 1 (Drosophila)	CT010370|Snai1|20613|snail homolog 1 (Drosophila)
mm9_v1_chr5_-_33617631_33617689	0.282751	HMX1.p2	AK160658|Ctbp1|13016|C-terminal binding protein 1	AK171650|Ctbp1|13016|C-terminal binding protein 1	NM_001198859|Ctbp1|13016|C-terminal binding protein 1	NM_001198860|Ctbp1|13016|C-terminal binding protein 1	NM_001198861|Ctbp1|13016|C-terminal binding protein 1	NM_013502|Ctbp1|13016|C-terminal binding protein 1
mm9_v1_chr4_-_102699296_102699446	0.282547	HMX1.p2	AF054843|Insl5|23919|insulin-like 5	BC010968|Insl5|23919|insulin-like 5	AF076971|Insl5|23919|insulin-like 5	AF133817|Insl5|23919|insulin-like 5	NM_011831|Insl5|23919|insulin-like 5	AF054842|Insl5|23919|insulin-like 5
mm9_v1_chr17_+_25273575_25273594	0.2815	HMX1.p2	AK150395|Clcn7|26373|chloride channel 7
mm9_v1_chr17_-_28759356_28759496	0.281494	HMX1.p2	AB012290|Srpk1|20815|serine/arginine-rich protein specific kinase 1	BC005707|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK161346|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK161388|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AJ224115|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK017187|Srpk1|20815|serine/arginine-rich protein specific kinase 1	BC050761|Srpk1|20815|serine/arginine-rich protein specific kinase 1	NM_016795|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK151152|Srpk1|20815|serine/arginine-rich protein specific kinase 1	AK141271|Srpk1|20815|serine/arginine-rich protein specific kinase 1
mm9_v1_chr11_+_95574279_95574370	0.2812	HMX1.p2	
mm9_v1_chr6_+_83007837_83007837	0.280404	HMX1.p2	BC075680|Dqx1|93838|DEAQ RNA-dependent ATPase	NM_033606|Dqx1|93838|DEAQ RNA-dependent ATPase
mm9_v1_chr10_+_126478969_126479041	0.279711	HMX1.p2	AB023619|Mettl1|17299|methyltransferase like 1	NM_010792|Mettl1|17299|methyltransferase like 1	BC012649|Mettl1|17299|methyltransferase like 1	AK160562|Mettl1|17299|methyltransferase like 1	AK160914|Mettl1|17299|methyltransferase like 1	AK164284|Mettl1|17299|methyltransferase like 1	AK140605|Mettl1|17299|methyltransferase like 1	Y18644|Mettl1|17299|methyltransferase like 1
mm9_v1_chr2_+_80479420_80479420	0.279232	HMX1.p2	NM_001190179|Nup35|69482|nucleoporin 35
mm9_v1_chr11_+_100721765_100721860	0.278163	HMX1.p2	NM_001164062|Stat5a|20850|signal transducer and activator of transcription 5A	AK090254|Stat5a|20850|signal transducer and activator of transcription 5A	BC056647|Stat5a|20850|signal transducer and activator of transcription 5A	Z48538|Stat5a|20850|signal transducer and activator of transcription 5A	AY299491|Stat5a|20850|signal transducer and activator of transcription 5A	AY299492|Stat5a|20850|signal transducer and activator of transcription 5A	EU249543|Stat5a|20850|signal transducer and activator of transcription 5A	AK154070|Stat5a|20850|signal transducer and activator of transcription 5A	BC008998|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr16_+_24393435_24393655	0.277733	HMX1.p2	NM_178665|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK168431|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK085626|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051345|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045288|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK045341|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK051937|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK086307|Lpp|210126|LIM domain containing preferred translocation partner in lipoma	AK169780|Lpp|210126|LIM domain containing preferred translocation partner in lipoma
mm9_v1_chr17_-_45710161_45710212	0.277382	HMX1.p2	AK184233|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK191250|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK194406|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195161|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK195294|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196279|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK196368|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK197826|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK198614|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK216006|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK146809|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M36829|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC002167|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	BC088985|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	M18186|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AF465639|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	NM_008302|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr1_+_84836413_84836453	0.277291	HMX1.p2	NM_025386|Fbxo36|66153|F-box protein 36	AK008324|Fbxo36|66153|F-box protein 36	AK003856|Fbxo36|66153|F-box protein 36	BC049581|Fbxo36|66153|F-box protein 36	AK036072|Fbxo36|66153|F-box protein 36
mm9_v1_chr13_-_105653835_105654053	0.277211	HMX1.p2	AK020882|Fam159b|77803|family with sequence similarity 159, member B	AK042897|Fam159b|77803|family with sequence similarity 159, member B	NM_029984|Fam159b|77803|family with sequence similarity 159, member B
mm9_v1_chr6_-_99676346_99676385	0.277075	HMX1.p2	AK015462|Prok2|50501|prokineticin 2	BC116911|Prok2|50501|prokineticin 2	BC144863|Prok2|50501|prokineticin 2	AF487280|Prok2|50501|prokineticin 2	AF182064|Prok2|50501|prokineticin 2	AF182065|Prok2|50501|prokineticin 2	AF182066|Prok2|50501|prokineticin 2	NM_001037539|Prok2|50501|prokineticin 2	NM_001170419|Prok2|50501|prokineticin 2	NM_015768|Prok2|50501|prokineticin 2
mm9_v1_chr10_+_79390058_79390085	0.276717	HMX1.p2	AK141283|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)
mm9_v1_chr17_+_29797537_29797684	0.274336	HMX1.p2	AK080379|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	NM_028791|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK049190|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK154773|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK042060|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK043733|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK088624|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK150392|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK151194|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152276|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152799|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153021|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK153066|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	BC024691|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK005044|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK152452|Ftsjd2|74157|FtsJ methyltransferase domain containing 2	AK198101|Ftsjd2|74157|FtsJ methyltransferase domain containing 2
mm9_v1_chr17_-_45710213_45710219	0.274229	HMX1.p2	AK030768|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK084097|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK135366|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1	AK146205|Hsp90ab1|15516|heat shock protein 90 alpha (cytosolic), class B member 1
mm9_v1_chr16_-_18235102_18235235	0.274217	HMX1.p2	AY668947|Zdhhc8|27801|zinc finger, DHHC domain containing 8	AY894892|Zdhhc8|27801|zinc finger, DHHC domain containing 8	NM_172151|Zdhhc8|27801|zinc finger, DHHC domain containing 8
mm9_v1_chrX_+_100516736_100516748	0.271912	HMX1.p2	L08061|Cdx4|12592|caudal type homeobox 4	NM_007674|Cdx4|12592|caudal type homeobox 4	BC119158|Cdx4|12592|caudal type homeobox 4
mm9_v1_chr7_-_134169581_134169633	0.271274	HMX1.p2	DQ150586|Maz|17188|MYC-associated zinc finger protein (purine-binding transcription factor)
mm9_v1_chr3_+_95462640_95462703	0.270653	HMX1.p2	NM_008562|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr1_+_133049757_133049907	0.270537	HMX1.p2	AK170252|Eif2d|16865|eukaryotic translation initiation factor 2D	AK082748|Eif2d|16865|eukaryotic translation initiation factor 2D	AK030312|Eif2d|16865|eukaryotic translation initiation factor 2D	AK046539|Eif2d|16865|eukaryotic translation initiation factor 2D	AK166085|Eif2d|16865|eukaryotic translation initiation factor 2D	AK170448|Eif2d|16865|eukaryotic translation initiation factor 2D	AK139052|Eif2d|16865|eukaryotic translation initiation factor 2D	NM_001136070|Eif2d|16865|eukaryotic translation initiation factor 2D	NM_010709|Eif2d|16865|eukaryotic translation initiation factor 2D	AK078472|Eif2d|16865|eukaryotic translation initiation factor 2D	BC023709|Eif2d|16865|eukaryotic translation initiation factor 2D	AK036154|Eif2d|16865|eukaryotic translation initiation factor 2D	AK047005|Eif2d|16865|eukaryotic translation initiation factor 2D	AK167980|Eif2d|16865|eukaryotic translation initiation factor 2D	AK161269|Eif2d|16865|eukaryotic translation initiation factor 2D	AK171115|Eif2d|16865|eukaryotic translation initiation factor 2D	AK034115|Eif2d|16865|eukaryotic translation initiation factor 2D	AK168120|Eif2d|16865|eukaryotic translation initiation factor 2D	AK083638|Eif2d|16865|eukaryotic translation initiation factor 2D	BC025036|Eif2d|16865|eukaryotic translation initiation factor 2D	AK193013|Eif2d|16865|eukaryotic translation initiation factor 2D	U58337|Eif2d|16865|eukaryotic translation initiation factor 2D
mm9_v1_chr4_+_151424681_151424743	0.270452	HMX1.p2	AK179132|Nol9|74035|nucleolar protein 9
mm9_v1_chr8_+_19293359_19293363	0.270246	HMX1.p2	BC116176|Defb3|27358|defensin beta 3	BC134358|Defb3|27358|defensin beta 3	BC116177|Defb3|27358|defensin beta 3	NM_013756|Defb3|27358|defensin beta 3	AF092929|Defb3|27358|defensin beta 3	BC114344|Defb3|27358|defensin beta 3
mm9_v1_chr7_+_148381017_148381054	0.269348	HMX1.p2	NM_153777|Lrrc56|70552|leucine rich repeat containing 56	BC027807|Lrrc56|70552|leucine rich repeat containing 56
mm9_v1_chr1_+_129999868_129999934	0.268527	HMX1.p2	AK144098|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	NM_181750|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK141150|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	BC049181|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)	AK051765|R3hdm1|226412|R3H domain 1 (binds single-stranded nucleic acids)
mm9_v1_chr2_+_112079943_112080042	0.268031	HMX1.p2	BC068131|Lpcat4|99010|lysophosphatidylcholine acyltransferase 4	NM_207206|Lpcat4|99010|lysophosphatidylcholine acyltransferase 4	BC080829|Lpcat4|99010|lysophosphatidylcholine acyltransferase 4
mm9_v1_chr4_+_146506201_146506201	0.267852	HMX1.p2	BC024323|Gm13139|666532|predicted gene 13139	NM_001083918|Gm13139|666532|predicted gene 13139
mm9_v1_chr2_+_173485260_173485380	0.267837	HMX1.p2	AK147619|Rab22a|19334|RAB22A, member RAS oncogene family	AK150617|Rab22a|19334|RAB22A, member RAS oncogene family	AK146594|Rab22a|19334|RAB22A, member RAS oncogene family	NM_024436|Rab22a|19334|RAB22A, member RAS oncogene family	AK021398|Rab22a|19334|RAB22A, member RAS oncogene family	AK149200|Rab22a|19334|RAB22A, member RAS oncogene family	BC006596|Rab22a|19334|RAB22A, member RAS oncogene family	AK014407|Rab22a|19334|RAB22A, member RAS oncogene family	AK031667|Rab22a|19334|RAB22A, member RAS oncogene family
mm9_v1_chr17_-_6476249_6476283	0.267065	HMX1.p2	AK166076|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene	BC147312|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene	BC147313|Tmem181b-ps|547127|transmembrane protein 181B, pseudogene
mm9_v1_chr3_+_27270272_27270272	0.266448	HMX1.p2	AK049671|Ghsr|208188|growth hormone secretagogue receptor	NM_177330|Ghsr|208188|growth hormone secretagogue receptor
mm9_v1_chr8_+_89996742_89996746	0.26598	HMX1.p2	AK144513|Gm2694|100040294|predicted gene 2694
mm9_v1_chr6_+_64679118_64679139	0.265457	HMX1.p2	AK082354|Atoh1|11921|atonal homolog 1 (Drosophila)	BC010820|Atoh1|11921|atonal homolog 1 (Drosophila)	NM_007500|Atoh1|11921|atonal homolog 1 (Drosophila)
mm9_v1_chr3_+_96963195_96963222	0.264717	HMX1.p2	AF216223|Acp6|66659|acid phosphatase 6, lysophosphatidic
mm9_v1_chr15_+_80064503_80064578	0.264716	HMX1.p2	AK163389|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	NM_178719|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK041184|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK038466|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK044773|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK050546|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	AK080375|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)	BC094597|Smcr7l|239555|Smith-Magenis syndrome chromosome region, candidate 7-like (human)
mm9_v1_chr16_-_97832775_97832801	0.264269	HMX1.p2	AK141350|Tmprss2|50528|transmembrane protease, serine 2	AK161173|Tmprss2|50528|transmembrane protease, serine 2	BC054348|Tmprss2|50528|transmembrane protease, serine 2	NM_015775|Tmprss2|50528|transmembrane protease, serine 2
mm9_v1_chr5_+_33715497_33715611	0.26407	HMX1.p2	
mm9_v1_chr3_+_102800607_102800650	0.263705	HMX1.p2	
mm9_v1_chr6_+_147039596_147039596	0.263647	HMX1.p2	NM_001081237|Klhdc5|232539|kelch domain containing 5
mm9_v1_chr5_-_145908992_145909289	0.263533	HMX1.p2	AK216509|Ptcd1|71799|pentatricopeptide repeat domain 1	AK213622|Ptcd1|71799|pentatricopeptide repeat domain 1	AK004421|Ptcd1|71799|pentatricopeptide repeat domain 1	AK218479|Ptcd1|71799|pentatricopeptide repeat domain 1	AK166306|Ptcd1|71799|pentatricopeptide repeat domain 1
mm9_v1_chr17_+_29230715_29230763	0.263153	HMX1.p2	AK139306|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK149910|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK170467|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	NM_007669|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK007630|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	AK089093|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	U24173|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)	BC002043|Cdkn1a|12575|cyclin-dependent kinase inhibitor 1A (P21)
mm9_v1_chr9_-_4309324_4309443	0.262961	HMX1.p2	AK188246|Aasdhppt|67618|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
mm9_v1_chr9_+_117161650_117161701	0.262788	HMX1.p2	
mm9_v1_chr17_+_34442808_34442831	0.262772	HMX1.p2	NM_010382|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr2_-_63022140_63022343	0.262668	HMX1.p2	AJ291608|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK052366|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK043768|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	AK034003|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_133207|Kcnh7|170738|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm9_v1_chr10_+_79764564_79764564	0.262537	HMX1.p2	NM_011789|Apc2|23805|adenomatosis polyposis coli 2
mm9_v1_chr2_-_9970235_9970261	0.262491	HMX1.p2	NM_027748|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK154372|Taf3|209361|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr15_+_41620484_41620584	0.260702	HMX1.p2	NM_001130165|Oxr1|170719|oxidation resistance 1	BC089183|Oxr1|170719|oxidation resistance 1
mm9_v1_chr11_-_74982551_74982653	0.259609	HMX1.p2	AF036334|Hic1|15248|hypermethylated in cancer 1
mm9_v1_chr8_+_94190341_94190551	0.258779	HMX1.p2	
mm9_v1_chr8_-_109620089_109620171	0.257545	HMX1.p2	AK160421|Terf2|21750|telomeric repeat binding factor 2
mm9_v1_chr12_-_71087988_71088118	0.256549	HMX1.p2	AJ292968|Sav1|64010|salvador homolog 1 (Drosophila)	NM_022028|Sav1|64010|salvador homolog 1 (Drosophila)
mm9_v1_chr19_+_6298046_6298161	0.255949	HMX1.p2	AK213323|Ehd1|13660|EH-domain containing 1	BC018268|Ehd1|13660|EH-domain containing 1	AK186064|Ehd1|13660|EH-domain containing 1
mm9_v1_chr18_-_36356813_36356813	0.254045	HMX1.p2	NM_001167891|Nrg2|100042150|neuregulin 2
mm9_v1_chr8_-_98099096_98099096	0.253575	HMX1.p2	NM_027640|Prss54|70993|protease, serine, 54
mm9_v1_chr16_-_90810621_90810657	0.25337	HMX1.p2	AK017495|Urb1|207932|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	AK050735|Urb1|207932|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	NM_029497|Urb1|207932|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm9_v1_chr2_-_25095376_25095416	0.252964	HMX1.p2	AK003658|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	AK009095|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	BC117777|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	BC117778|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene	NM_026415|2310002J15Rik|67859|RIKEN cDNA 2310002J15 gene
mm9_v1_chr7_-_105805050_105805106	0.252928	HMX1.p2	BC066050|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC039956|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	BC089304|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	NM_172280|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene	AK032985|2210018M11Rik|233545|RIKEN cDNA 2210018M11 gene
mm9_v1_chr11_+_76812098_76812116	0.251008	HMX1.p2	NM_010484|Slc6a4|15567|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4	BC108978|Slc6a4|15567|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4	BC108979|Slc6a4|15567|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4
mm9_v1_chr14_-_45479028_45479049	0.250975	HMX1.p2	BC132297|Ptgdr|19214|prostaglandin D receptor	AK032488|Ptgdr|19214|prostaglandin D receptor	NM_008962|Ptgdr|19214|prostaglandin D receptor
mm9_v1_chr17_-_66234633_66234667	0.250725	HMX1.p2	AK145387|Ralbp1|19765|ralA binding protein 1	BC028516|Ralbp1|19765|ralA binding protein 1	AK133613|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr13_+_32893882_32893918	0.250115	HMX1.p2	AK050368|Wrnip1|78903|Werner helicase interacting protein 1	AK167570|Wrnip1|78903|Werner helicase interacting protein 1	NM_030215|Wrnip1|78903|Werner helicase interacting protein 1	AK170542|Wrnip1|78903|Werner helicase interacting protein 1	BC010482|Wrnip1|78903|Werner helicase interacting protein 1	AK170846|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chrX_-_75098856_75098869	0.249215	HMX1.p2	AK137501|Pbsn|54192|probasin
mm9_v1_chr9_+_69855789_69855998	0.24668	HMX1.p2	AF071429|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2	AK161900|Bnip2|12175|BCL2/adenovirus E1B interacting protein 2
mm9_v1_chr9_-_20699140_20699152	0.246453	HMX1.p2	AK214405|Eif3g|53356|eukaryotic translation initiation factor 3, subunit G
mm9_v1_chr17_-_10512217_10512250	0.246358	HMX1.p2	AK132303|Qk|19317|quaking	NM_001159516|Qk|19317|quaking	NM_001159517|Qk|19317|quaking	NM_021881|Qk|19317|quaking	U44940|Qk|19317|quaking
mm9_v1_chr11_+_87032504_87032509	0.245483	HMX1.p2	AK004018|Trim37|68729|tripartite motif-containing 37
mm9_v1_chrX_-_7753020_7753088	0.244178	HMX1.p2	AK166256|Tbc1d25|209815|TBC1 domain family, member 25	AK040932|Tbc1d25|209815|TBC1 domain family, member 25	BC060178|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr10_+_80643547_80643880	0.244118	HMX1.p2	BC002233|Eef2|13629|eukaryotic translation elongation factor 2	M76131|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr8_-_97855675_97855849	0.243013	HMX1.p2	BC033441|Zfp319|79233|zinc finger protein 319	AK052274|Zfp319|79233|zinc finger protein 319	AK089263|Zfp319|79233|zinc finger protein 319	AK048624|Zfp319|79233|zinc finger protein 319	BC059823|Zfp319|79233|zinc finger protein 319	NM_024467|Zfp319|79233|zinc finger protein 319
mm9_v1_chr17_+_29169579_29169604	0.242522	HMX1.p2	NM_013663|Srsf3|20383|serine/arginine-rich splicing factor 3
mm9_v1_chr5_+_144861227_144861325	0.240397	HMX1.p2	AK158724|Lmtk2|231876|lemur tyrosine kinase 2	NM_001081109|Lmtk2|231876|lemur tyrosine kinase 2
mm9_v1_chr15_+_76098518_76098558	0.239271	HMX1.p2	AB032199|Spatc1|74281|spermatogenesis and centriole associated 1	AK006994|Spatc1|74281|spermatogenesis and centriole associated 1	NM_028852|Spatc1|74281|spermatogenesis and centriole associated 1	BC116725|Spatc1|74281|spermatogenesis and centriole associated 1	BC118509|Spatc1|74281|spermatogenesis and centriole associated 1
mm9_v1_chr4_-_26273772_26273798	0.239148	HMX1.p2	AK030141|Manea|242362|mannosidase, endo-alpha	BC067076|Manea|242362|mannosidase, endo-alpha	NM_172865|Manea|242362|mannosidase, endo-alpha
mm9_v1_chr13_+_16106279_16106315	0.238712	HMX1.p2	NM_008380|Inhba|16323|inhibin beta-A	X69619|Inhba|16323|inhibin beta-A	BC053527|Inhba|16323|inhibin beta-A
mm9_v1_chr18_-_85120875_85120936	0.238253	HMX1.p2	AK017477|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	BC034297|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK029037|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK012203|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK032468|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	NM_025969|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr10_-_79017835_79017849	0.237791	HMX1.p2	BC067013|Mier2|70427|mesoderm induction early response 1, family member 2	NM_027422|Mier2|70427|mesoderm induction early response 1, family member 2	AK154672|Mier2|70427|mesoderm induction early response 1, family member 2
mm9_v1_chr4_+_146237770_146237770	0.237525	HMX1.p2	NM_027285|1700029I01Rik|70005|RIKEN cDNA 1700029I01 gene
mm9_v1_chr19_-_5560556_5560645	0.236547	HMX1.p2	AF134805|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK028577|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK132478|Ovol1|18426|OVO homolog-like 1 (Drosophila)	NM_019935|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AF134804|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK003801|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK132505|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK132506|Ovol1|18426|OVO homolog-like 1 (Drosophila)	AK144952|Ovol1|18426|OVO homolog-like 1 (Drosophila)	BC021411|Ovol1|18426|OVO homolog-like 1 (Drosophila)
mm9_v1_chr2_-_56976530_56976555	0.235686	HMX1.p2	AK087495|Nr4a2|18227|nuclear receptor subfamily 4, group A, member 2
mm9_v1_chr14_+_61791811_61791874	0.235256	HMX1.p2	AK053626|Sacs|50720|sacsin	AK052467|Sacs|50720|sacsin
mm9_v1_chr5_+_30559138_30559249	0.23476	HMX1.p2	NM_027652|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040494|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK079325|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK083973|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK140416|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC106097|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK048011|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK014530|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC115783|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	BC117551|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK122544|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)	AK040745|Ept1|28042|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm9_v1_chr17_-_24580867_24580878	0.23273	HMX1.p2	AK178081|E4f1|13560|E4F transcription factor 1
mm9_v1_chr11_+_57822347_57822565	0.232301	HMX1.p2	NM_028451|Larp1|73158|La ribonucleoprotein domain family, member 1
mm9_v1_chr17_-_84586361_84586476	0.232115	HMX1.p2	M58564|Zfp36l2|12193|zinc finger protein 36, C3H type-like 2
mm9_v1_chr1_-_174259356_174259436	0.231723	HMX1.p2	AF130860|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	AK033970|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	NM_008429|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	U11860|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	AK046084|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9	AK015907|Kcnj9|16524|potassium inwardly-rectifying channel, subfamily J, member 9
mm9_v1_chr15_-_81524457_81524636	0.231125	HMX1.p2	AK086273|Chadl|214685|chondroadherin-like	AK139481|Chadl|214685|chondroadherin-like
mm9_v1_chr3_-_115955629_115955694	0.23105	HMX1.p2	BC157981|Gpr88|64378|G-protein coupled receptor 88	BC051941|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr11_+_58731409_58731558	0.229445	HMX1.p2	AK143638|Butr1|192194|butyrophilin related 1	AK029784|Butr1|192194|butyrophilin related 1	AF269232|Butr1|192194|butyrophilin related 1	NM_138678|Butr1|192194|butyrophilin related 1
mm9_v1_chr17_+_25377114_25377187	0.229352	HMX1.p2	AK158743|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_001163718|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	NM_026676|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK002309|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK003675|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK170074|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	BC089019|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene	AK169072|0610007P22Rik|68327|RIKEN cDNA 0610007P22 gene
mm9_v1_chr10_+_41196119_41196320	0.227771	HMX1.p2	AK171411|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	NM_001164433|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	NM_138315|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK170874|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK154930|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK171429|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK171779|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK171479|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK172562|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK170827|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK170881|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK171234|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK159369|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK157196|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK154665|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK170382|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	BC021477|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	AK172716|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1	BC034682|Mical1|171580|microtubule associated monoxygenase, calponin and LIM domain containing 1
mm9_v1_chr10_+_79239973_79240019	0.227191	HMX1.p2	AK082898|Fstl3|83554|follistatin-like 3	BC061052|Fstl3|83554|follistatin-like 3	NM_031380|Fstl3|83554|follistatin-like 3
mm9_v1_chr8_+_75247184_75247186	0.227181	HMX1.p2	AK146847|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	AK159076|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	AK169433|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	NM_001113248|Sin3b|20467|transcriptional regulator, SIN3B (yeast)	NM_009188|Sin3b|20467|transcriptional regulator, SIN3B (yeast)
mm9_v1_chr17_+_26698421_26698560	0.227062	HMX1.p2	BC005516|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	NM_026170|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK173123|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK003239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK088157|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK004629|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK151239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK084385|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	BC083144|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AB093571|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	CT010230|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr11_+_116704828_116704913	0.225667	HMX1.p2	NM_028865|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK135294|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	AK168267|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene	BC026936|1110005A03Rik|74319|RIKEN cDNA 1110005A03 gene
mm9_v1_chr9_-_21092394_21092412	0.224554	HMX1.p2	BC021438|Kri1|215194|KRI1 homolog (S. cerevisiae)	AK051997|Kri1|215194|KRI1 homolog (S. cerevisiae)	NM_145416|Kri1|215194|KRI1 homolog (S. cerevisiae)
mm9_v1_chr14_-_67627598_67627723	0.224271	HMX1.p2	AK220143|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC049081|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK139950|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK004667|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC085237|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK018668|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK155040|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AY057069|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK013467|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK007920|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AF067395|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK168482|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK169391|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	NM_009761|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like
mm9_v1_chr10_+_79127318_79127351	0.223948	HMX1.p2	AK137028|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1	NM_013591|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1	BC115910|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1	BC118056|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1	L21203|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1	BC024372|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1	AK156096|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1	S80258|Madcam1|17123|mucosal vascular addressin cell adhesion molecule 1
mm9_v1_chr7_+_138686380_138686476	0.223446	HMX1.p2	BC139482|Hmx3|15373|H6 homeobox 3	BC139483|Hmx3|15373|H6 homeobox 3	NM_008257|Hmx3|15373|H6 homeobox 3
mm9_v1_chr19_+_46431369_46431437	0.223084	HMX1.p2	NM_029186|Tmem180|75146|transmembrane protein 180	AK151797|Tmem180|75146|transmembrane protein 180	AK161305|Tmem180|75146|transmembrane protein 180	BC058746|Tmem180|75146|transmembrane protein 180	AK031554|Tmem180|75146|transmembrane protein 180	BC031169|Tmem180|75146|transmembrane protein 180
mm9_v1_chr5_-_121010389_121010403	0.221604	HMX1.p2	AK137626|Tpcn1|252972|two pore channel 1
mm9_v1_chr3_-_90294832_90294961	0.220526	HMX1.p2	AF086838|Snapin|20615|SNAP-associated protein	AK152057|Snapin|20615|SNAP-associated protein	BC048691|Snapin|20615|SNAP-associated protein	AK007458|Snapin|20615|SNAP-associated protein	AK044085|Snapin|20615|SNAP-associated protein	AK048007|Snapin|20615|SNAP-associated protein	AK135006|Snapin|20615|SNAP-associated protein	AK077840|Snapin|20615|SNAP-associated protein	AK080718|Snapin|20615|SNAP-associated protein	AK035147|Snapin|20615|SNAP-associated protein	AK050151|Snapin|20615|SNAP-associated protein	NM_133854|Snapin|20615|SNAP-associated protein
mm9_v1_chr14_+_15178886_15179105	0.219116	HMX1.p2	NM_008369|Il3ra|16188|interleukin 3 receptor, alpha chain	X64534|Il3ra|16188|interleukin 3 receptor, alpha chain	BC049889|Il3ra|16188|interleukin 3 receptor, alpha chain
mm9_v1_chr18_+_75979831_75979868	0.218484	HMX1.p2	BC070424|Zbtb7c|207259|zinc finger and BTB domain containing 7C	NM_145356|Zbtb7c|207259|zinc finger and BTB domain containing 7C	AK045522|Zbtb7c|207259|zinc finger and BTB domain containing 7C
mm9_v1_chr19_-_46119403_46119446	0.217423	HMX1.p2	AF030333|Ldb1|16825|LIM domain binding 1
mm9_v1_chr3_-_88307024_88307186	0.216703	HMX1.p2	DQ832702|Lmna|16905|lamin A	DQ832703|Lmna|16905|lamin A	AK161221|Lmna|16905|lamin A	BC094020|Lmna|16905|lamin A	BC015302|Lmna|16905|lamin A	AK153295|Lmna|16905|lamin A
mm9_v1_chr15_+_84847570_84847657	0.215956	HMX1.p2	BC125336|Upk3a|22270|uroplakin 3A	BC125338|Upk3a|22270|uroplakin 3A	NM_023478|Upk3a|22270|uroplakin 3A	DQ387454|Upk3a|22270|uroplakin 3A	AF222750|Upk3a|22270|uroplakin 3A
mm9_v1_chr6_+_83004687_83004775	0.215909	HMX1.p2	AK171202|Aup1|11993|ancient ubiquitous protein 1	AK171011|Aup1|11993|ancient ubiquitous protein 1	AK171184|Aup1|11993|ancient ubiquitous protein 1	BC016485|Aup1|11993|ancient ubiquitous protein 1	AK144497|Aup1|11993|ancient ubiquitous protein 1	AK158035|Aup1|11993|ancient ubiquitous protein 1	AK167335|Aup1|11993|ancient ubiquitous protein 1	AK171249|Aup1|11993|ancient ubiquitous protein 1	AK171541|Aup1|11993|ancient ubiquitous protein 1	U41736|Aup1|11993|ancient ubiquitous protein 1	AK171621|Aup1|11993|ancient ubiquitous protein 1	BC012699|Aup1|11993|ancient ubiquitous protein 1
mm9_v1_chr4_+_128964854_128964874	0.215857	HMX1.p2	AK081983|Sync|68828|syncoilin	NM_023485|Sync|68828|syncoilin	AK160756|Sync|68828|syncoilin
mm9_v1_chrX_+_97170927_97171053	0.213022	HMX1.p2	AK028502|Eda|13607|ectodysplasin-A	AF016627|Eda|13607|ectodysplasin-A	AF016628|Eda|13607|ectodysplasin-A	AF016629|Eda|13607|ectodysplasin-A	AF016630|Eda|13607|ectodysplasin-A	DQ168876|Eda|13607|ectodysplasin-A	DQ168877|Eda|13607|ectodysplasin-A	DQ168878|Eda|13607|ectodysplasin-A	DQ168879|Eda|13607|ectodysplasin-A	DQ168880|Eda|13607|ectodysplasin-A	DQ168881|Eda|13607|ectodysplasin-A	NM_001177937|Eda|13607|ectodysplasin-A	NM_001177938|Eda|13607|ectodysplasin-A	NM_001177939|Eda|13607|ectodysplasin-A	NM_001177940|Eda|13607|ectodysplasin-A	NM_001177941|Eda|13607|ectodysplasin-A	NM_001177942|Eda|13607|ectodysplasin-A	NM_001177943|Eda|13607|ectodysplasin-A	NM_001177944|Eda|13607|ectodysplasin-A	NM_010099|Eda|13607|ectodysplasin-A	AF016631|Eda|13607|ectodysplasin-A	AJ243657|Eda|13607|ectodysplasin-A	AK040754|Eda|13607|ectodysplasin-A	AF004435|Eda|13607|ectodysplasin-A	AJ243658|Eda|13607|ectodysplasin-A	AK137551|Eda|13607|ectodysplasin-A	BC125387|Eda|13607|ectodysplasin-A	BC144790|Eda|13607|ectodysplasin-A	BC144791|Eda|13607|ectodysplasin-A
mm9_v1_chr2_+_164388211_164388224	0.212583	HMX1.p2	AK005519|Wfdc2|67701|WAP four-disulfide core domain 2	NM_026323|Wfdc2|67701|WAP four-disulfide core domain 2	AF334269|Wfdc2|67701|WAP four-disulfide core domain 2	BC099427|Wfdc2|67701|WAP four-disulfide core domain 2
mm9_v1_chr12_+_3806955_3807159	0.211919	HMX1.p2	NM_007872|Dnmt3a|13435|DNA methyltransferase 3A	AF503867|Dnmt3a|13435|DNA methyltransferase 3A	AK090132|Dnmt3a|13435|DNA methyltransferase 3A	AK147676|Dnmt3a|13435|DNA methyltransferase 3A	BC007466|Dnmt3a|13435|DNA methyltransferase 3A	AF068625|Dnmt3a|13435|DNA methyltransferase 3A	AK147263|Dnmt3a|13435|DNA methyltransferase 3A	AK147627|Dnmt3a|13435|DNA methyltransferase 3A	AK147642|Dnmt3a|13435|DNA methyltransferase 3A
mm9_v1_chr15_-_68090194_68090247	0.210969	HMX1.p2	EU221277|Zfat|380993|zinc finger and AT hook domain containing
mm9_v1_chr5_+_135663405_135663452	0.210007	HMX1.p2	AK140172|Baz1b|22385|bromodomain adjacent to zinc finger domain, 1B	AK141305|Baz1b|22385|bromodomain adjacent to zinc finger domain, 1B
mm9_v1_chr13_+_8952108_8952122	0.209992	HMX1.p2	AK029364|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	AK081319|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	AY263178|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	NM_177197|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	BC099586|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	BC125310|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	BC138100|Idi2|320581|isopentenyl-diphosphate delta isomerase 2
mm9_v1_chr6_+_125271356_125271401	0.209466	HMX1.p2	AK140389|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha	NM_011324|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha	BC022748|Scnn1a|20276|sodium channel, nonvoltage-gated 1 alpha
mm9_v1_chr16_-_44016471_44016548	0.208801	HMX1.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr4_+_106233632_106233688	0.208329	HMX1.p2	AK129036|Dhcr24|74754|24-dehydrocholesterol reductase	NM_053272|Dhcr24|74754|24-dehydrocholesterol reductase	AK083737|Dhcr24|74754|24-dehydrocholesterol reductase
mm9_v1_chr7_-_31608793_31608793	0.207773	HMX1.p2	AK078861|Ffar2|233079|free fatty acid receptor 2	NM_146187|Ffar2|233079|free fatty acid receptor 2
mm9_v1_chr19_-_4175478_4175577	0.207334	HMX1.p2	NM_134148|Carns1|107239|carnosine synthase 1
mm9_v1_chr3_+_92796138_92796147	0.20673	HMX1.p2	BC060281|Lce3f|69520|late cornified envelope 3F	NM_001018079|Lce3f|69520|late cornified envelope 3F
mm9_v1_chr10_+_111602731_111602731	0.206704	HMX1.p2	BC116659|Caps2|353025|calcyphosphine 2	NM_178278|Caps2|353025|calcyphosphine 2
mm9_v1_chr11_-_69714395_69714488	0.206702	HMX1.p2	AK160144|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	AK171674|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	AK015537|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	BC051546|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	AK051029|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	BC055710|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	BC069874|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	NM_027419|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene	AK013042|2810408A11Rik|70419|RIKEN cDNA 2810408A11 gene
mm9_v1_chr17_+_24769624_24769711	0.206682	HMX1.p2	AK033701|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	NM_008743|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	Y09688|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	BC138852|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	BC138855|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	BC145443|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)	AB006812|Nthl1|18207|nth (endonuclease III)-like 1 (E.coli)
mm9_v1_chr5_-_86947601_86947624	0.206599	HMX1.p2	BC118660|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	BC118611|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	AK036981|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	NM_177162|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene
mm9_v1_chr5_+_75471625_75471626	0.206314	HMX1.p2	NM_133256|Gsx2|14843|GS homeobox 2	S79041|Gsx2|14843|GS homeobox 2	BC119464|Gsx2|14843|GS homeobox 2	BC119465|Gsx2|14843|GS homeobox 2
mm9_v1_chr12_+_74224693_74224793	0.2062	HMX1.p2	AK048499|Mnat1|17420|menage a trois 1	AK155859|Mnat1|17420|menage a trois 1	NM_008612|Mnat1|17420|menage a trois 1	AK008249|Mnat1|17420|menage a trois 1	BC089023|Mnat1|17420|menage a trois 1	BC115630|Mnat1|17420|menage a trois 1	BC115631|Mnat1|17420|menage a trois 1	AK157721|Mnat1|17420|menage a trois 1	AK008134|Mnat1|17420|menage a trois 1	AK053621|Mnat1|17420|menage a trois 1	AK011833|Mnat1|17420|menage a trois 1	AK029174|Mnat1|17420|menage a trois 1
mm9_v1_chr17_-_36116411_36116411	0.205454	HMX1.p2	NM_001165892|Prr3|75210|proline-rich polypeptide 3	NM_145487|Prr3|75210|proline-rich polypeptide 3
mm9_v1_chr4_-_119211373_119211373	0.2038	HMX1.p2	BC076608|AA415398|433752|expressed sequence AA415398	NM_001004178|AA415398|433752|expressed sequence AA415398
mm9_v1_chr17_+_28046196_28046431	0.203226	HMX1.p2	BC050847|Anks1|224650|ankyrin repeat and SAM domain containing 1	NM_181413|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK129094|Anks1|224650|ankyrin repeat and SAM domain containing 1	AK147273|Anks1|224650|ankyrin repeat and SAM domain containing 1
mm9_v1_chr15_-_37162666_37162676	0.203195	HMX1.p2	AK017454|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr16_+_18876817_18876842	0.202168	HMX1.p2	NM_010435|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr6_-_81915918_81915957	0.201892	HMX1.p2	BC020315|Mrpl19|56284|mitochondrial ribosomal protein L19	BC043921|Mrpl19|56284|mitochondrial ribosomal protein L19	BC061064|Mrpl19|56284|mitochondrial ribosomal protein L19	AK030793|Mrpl19|56284|mitochondrial ribosomal protein L19	AK021180|Mrpl19|56284|mitochondrial ribosomal protein L19	AK050637|Mrpl19|56284|mitochondrial ribosomal protein L19	NM_026490|Mrpl19|56284|mitochondrial ribosomal protein L19	AK141554|Mrpl19|56284|mitochondrial ribosomal protein L19
mm9_v1_chr6_-_148779856_148779997	0.200759	HMX1.p2	BC151036|Ipo8|320727|importin 8	BC151052|Ipo8|320727|importin 8	BC044819|Ipo8|320727|importin 8	BC054373|Ipo8|320727|importin 8	NM_001081113|Ipo8|320727|importin 8
mm9_v1_chr2_+_84680479_84680580	0.200517	HMX1.p2	NM_024497|Slc43a1|72401|solute carrier family 43, member 1	BC053747|Slc43a1|72401|solute carrier family 43, member 1
mm9_v1_chr18_+_36440748_36440822	0.200151	HMX1.p2	NM_008989|Pura|19290|purine rich element binding protein A	U02098|Pura|19290|purine rich element binding protein A
mm9_v1_chr5_+_125002866_125002933	0.198736	HMX1.p2	AK154422|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_001190795|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	NM_026409|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK167149|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK012782|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK077525|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK129402|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK033741|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117786|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC117787|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	BC043052|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	AK017554|Ddx55|67848|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
mm9_v1_chr9_+_32201569_32201569	0.197919	HMX1.p2	BC020525|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1	NM_001168354|Kcnj1|56379|potassium inwardly-rectifying channel, subfamily J, member 1
mm9_v1_chr3_-_51081421_51081435	0.197829	HMX1.p2	AK088422|Elf2|69257|E74-like factor 2
mm9_v1_chr3_+_96836314_96836366	0.196337	HMX1.p2	AY390401|Gja5|14613|gap junction protein, alpha 5	BC053054|Gja5|14613|gap junction protein, alpha 5	NM_008121|Gja5|14613|gap junction protein, alpha 5	AK137069|Gja5|14613|gap junction protein, alpha 5
mm9_v1_chr9_-_70782366_70782427	0.196158	HMX1.p2	AY228765|Lipc|15450|lipase, hepatic	X58426|Lipc|15450|lipase, hepatic	BC094050|Lipc|15450|lipase, hepatic
mm9_v1_chr19_-_4615523_4615557	0.195737	HMX1.p2	AK163603|Lrfn4|225875|leucine rich repeat and fibronectin type III domain containing 4
mm9_v1_chr15_+_88650015_88650107	0.195596	HMX1.p2	AK017880|Creld2|76737|cysteine-rich with EGF-like domains 2	NM_029720|Creld2|76737|cysteine-rich with EGF-like domains 2	AK165884|Creld2|76737|cysteine-rich with EGF-like domains 2
mm9_v1_chr18_+_70085202_70085238	0.195143	HMX1.p2	AK078964|Ccdc68|381175|coiled-coil domain containing 68	NM_201362|Ccdc68|381175|coiled-coil domain containing 68	BC046343|Ccdc68|381175|coiled-coil domain containing 68
mm9_v1_chr13_-_74199688_74199784	0.194965	HMX1.p2	BC080681|Cep72|74470|centrosomal protein 72	BC060686|Cep72|74470|centrosomal protein 72	AK017134|Cep72|74470|centrosomal protein 72	AK034892|Cep72|74470|centrosomal protein 72	NM_028959|Cep72|74470|centrosomal protein 72
mm9_v1_chr7_+_53183767_53183771	0.194704	HMX1.p2	AK135860|Ccdc114|211535|coiled-coil domain containing 114	NM_001033243|Ccdc114|211535|coiled-coil domain containing 114	BC172013|Ccdc114|211535|coiled-coil domain containing 114
mm9_v1_chr5_+_106128934_106129078	0.194277	HMX1.p2	AK137459|Lrrc8d|231549|leucine rich repeat containing 8D	NM_001122768|Lrrc8d|231549|leucine rich repeat containing 8D	AK046249|Lrrc8d|231549|leucine rich repeat containing 8D	AK080722|Lrrc8d|231549|leucine rich repeat containing 8D
mm9_v1_chr16_-_89974943_89974943	0.19228	HMX1.p2	AK147392|Tiam1|21844|T-cell lymphoma invasion and metastasis 1	NM_001145886|Tiam1|21844|T-cell lymphoma invasion and metastasis 1
mm9_v1_chr17_-_80689434_80689517	0.190256	HMX1.p2	BC079618|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC066091|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC065169|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	AK042947|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr2_+_94246863_94246944	0.190079	HMX1.p2	AK012638|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK016411|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK148028|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene	AK141492|2810002D19Rik|66457|RIKEN cDNA 2810002D19 gene
mm9_v1_chr19_-_21028691_21028691	0.190002	HMX1.p2	AF417579|Tmc1|13409|transmembrane channel-like gene family 1	NM_028953|Tmc1|13409|transmembrane channel-like gene family 1
mm9_v1_chr3_-_103546233_103546253	0.189765	HMX1.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr4_-_143998305_143998366	0.188932	HMX1.p2	AK167683|Pramef12|77632|PRAME family member 12	BC066168|Pramef12|77632|PRAME family member 12	AK019795|Pramef12|77632|PRAME family member 12	NM_029948|Pramef12|77632|PRAME family member 12
mm9_v1_chr2_-_130912481_130912549	0.188834	HMX1.p2	NM_011426|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	Z36233|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	Z36234|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin	Z36293|Siglec1|20612|sialic acid binding Ig-like lectin 1, sialoadhesin
mm9_v1_chr7_+_148265691_148265711	0.18871	HMX1.p2	BC020472|Pkp3|56460|plakophilin 3	BC106141|Pkp3|56460|plakophilin 3	BC032045|Pkp3|56460|plakophilin 3	BC139775|Pkp3|56460|plakophilin 3
mm9_v1_chr9_+_108250153_108250277	0.188463	HMX1.p2	NM_011678|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK169372|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK169933|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK171271|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	L00681|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK149964|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK220512|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK171633|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK138838|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	AK143582|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC011341|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC066180|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)	BC066865|Usp4|22258|ubiquitin specific peptidase 4 (proto-oncogene)
mm9_v1_chr9_-_42208011_42208011	0.188334	HMX1.p2	NM_009347|Tecta|21683|tectorin alpha	X99805|Tecta|21683|tectorin alpha
mm9_v1_chr3_+_95462705_95462778	0.18582	HMX1.p2	BC003839|Mcl1|17210|myeloid cell leukemia sequence 1	BC021638|Mcl1|17210|myeloid cell leukemia sequence 1	BC005427|Mcl1|17210|myeloid cell leukemia sequence 1	AK159504|Mcl1|17210|myeloid cell leukemia sequence 1	U35623|Mcl1|17210|myeloid cell leukemia sequence 1	GU182318|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr2_-_25483461_25483497	0.18577	HMX1.p2	AK159651|Fcna|14133|ficolin A	AK133539|Fcna|14133|ficolin A	NM_007995|Fcna|14133|ficolin A
mm9_v1_chr4_+_126354857_126354998	0.185635	HMX1.p2	NM_011970|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK078487|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK164463|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	BC008265|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AF060090|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2
mm9_v1_chr2_-_144157430_144157498	0.185467	HMX1.p2	AB101296|Ovol2|107586|ovo-like 2 (Drosophila)
mm9_v1_chr4_+_89354888_89354955	0.185291	HMX1.p2	AF542047|Dmrta1|242523|doublesex and mab-3 related transcription factor like family A1	NM_175647|Dmrta1|242523|doublesex and mab-3 related transcription factor like family A1	BC137613|Dmrta1|242523|doublesex and mab-3 related transcription factor like family A1
mm9_v1_chr11_+_67466072_67466088	0.184835	HMX1.p2	AF133184|Gas7|14457|growth arrest specific 7
mm9_v1_chr2_-_146911080_146911080	0.184117	HMX1.p2	NM_023504|Nkx2-4|228731|NK2 transcription factor related, locus 4 (Drosophila)
mm9_v1_chr1_-_74998224_74998295	0.1827	HMX1.p2	BC046984|Ihh|16147|Indian hedgehog	NM_010544|Ihh|16147|Indian hedgehog	AK144322|Ihh|16147|Indian hedgehog
mm9_v1_chr7_-_31011907_31012028	0.182695	HMX1.p2	AK214432|Tbcb|66411|tubulin folding cofactor B
mm9_v1_chr7_-_31420850_31420870	0.182687	HMX1.p2	AB221612|Etv2|14008|ets variant gene 2	L10427|Etv2|14008|ets variant gene 2	NM_007959|Etv2|14008|ets variant gene 2
mm9_v1_chr6_+_113408650_113408888	0.1824	HMX1.p2	AK169498|Il17re|57890|interleukin 17 receptor E	AK044815|Il17re|57890|interleukin 17 receptor E	BC069861|Il17re|57890|interleukin 17 receptor E	AK046713|Il17re|57890|interleukin 17 receptor E	AF458068|Il17re|57890|interleukin 17 receptor E	DQ092339|Il17re|57890|interleukin 17 receptor E	DQ092340|Il17re|57890|interleukin 17 receptor E	DQ092341|Il17re|57890|interleukin 17 receptor E	NM_001034029|Il17re|57890|interleukin 17 receptor E	NM_001034031|Il17re|57890|interleukin 17 receptor E
mm9_v1_chrX_+_71542444_71542520	0.182356	HMX1.p2	AK220247|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK158956|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK093961|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	BC048241|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159449|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK168080|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK161631|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK150333|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK166793|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AK159612|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1	AB031290|Atp6ap1|54411|ATPase, H+ transporting, lysosomal accessory protein 1
mm9_v1_chr1_+_39592594_39592679	0.181885	HMX1.p2	AK144692|D1Bwg0212e|52846|DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed	AK010503|D1Bwg0212e|52846|DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed	BC049091|D1Bwg0212e|52846|DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed	NM_028043|D1Bwg0212e|52846|DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed	AK167440|D1Bwg0212e|52846|DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed	BC050812|D1Bwg0212e|52846|DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed
mm9_v1_chr2_-_164630371_164630416	0.178577	HMX1.p2	AF441166|Acot8|170789|acyl-CoA thioesterase 8	NM_133240|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr3_+_33919000_33919031	0.178414	HMX1.p2	NM_001113188|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_001113189|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	NM_008053|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	X90875|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog	BC019139|Fxr1|14359|fragile X mental retardation gene 1, autosomal homolog
mm9_v1_chr14_-_27489119_27489164	0.177876	HMX1.p2	AK167708|Pde12|211948|phosphodiesterase 12	AK088843|Pde12|211948|phosphodiesterase 12	AK143567|Pde12|211948|phosphodiesterase 12	AK082947|Pde12|211948|phosphodiesterase 12	AK155088|Pde12|211948|phosphodiesterase 12
mm9_v1_chr2_+_127680363_127680363	0.177781	HMX1.p2	AK004775|Acoxl|74121|acyl-Coenzyme A oxidase-like	NM_028765|Acoxl|74121|acyl-Coenzyme A oxidase-like
mm9_v1_chr2_+_74601036_74601155	0.17769	HMX1.p2	NM_010467|Hoxd1|15429|homeobox D1	X60034|Hoxd1|15429|homeobox D1	BC120537|Hoxd1|15429|homeobox D1	BC120539|Hoxd1|15429|homeobox D1	AB221561|Hoxd1|15429|homeobox D1
mm9_v1_chr3_-_89195913_89195990	0.177447	HMX1.p2	AK149976|Zbtb7b|22724|zinc finger and BTB domain containing 7B
mm9_v1_chr14_-_58353136_58353256	0.175879	HMX1.p2	AY015061|Lats2|50523|large tumor suppressor 2	AY015062|Lats2|50523|large tumor suppressor 2	AB023958|Lats2|50523|large tumor suppressor 2	BC040025|Lats2|50523|large tumor suppressor 2	NM_153382|Lats2|50523|large tumor suppressor 2
mm9_v1_chr15_+_89153402_89153406	0.175061	HMX1.p2	BC096428|Adm2|223780|adrenomedullin 2	NM_182928|Adm2|223780|adrenomedullin 2	AB121035|Adm2|223780|adrenomedullin 2
mm9_v1_chr6_-_118512232_118512294	0.173977	HMX1.p2	AK017783|Ankrd26|232339|ankyrin repeat domain 26	BC047067|Ankrd26|232339|ankyrin repeat domain 26	AK084890|Ankrd26|232339|ankyrin repeat domain 26	AK087771|Ankrd26|232339|ankyrin repeat domain 26	NM_001081112|Ankrd26|232339|ankyrin repeat domain 26
mm9_v1_chr6_-_30643681_30643723	0.1729	HMX1.p2	BC031892|Tsga14|83922|testis specific gene A14	NM_031998|Tsga14|83922|testis specific gene A14	AK161461|Tsga14|83922|testis specific gene A14	AK166974|Tsga14|83922|testis specific gene A14	AK019270|Tsga14|83922|testis specific gene A14	AK132495|Tsga14|83922|testis specific gene A14	AJ278891|Tsga14|83922|testis specific gene A14	AK006059|Tsga14|83922|testis specific gene A14	AK170213|Tsga14|83922|testis specific gene A14
mm9_v1_chr19_+_6363686_6363698	0.172411	HMX1.p2	NM_001110791|Sf1|22668|splicing factor 1	NM_011750|Sf1|22668|splicing factor 1
mm9_v1_chr11_-_62545374_62545408	0.171415	HMX1.p2	AK133603|Zfp287|170740|zinc finger protein 287	AK046006|Zfp287|170740|zinc finger protein 287
mm9_v1_chr11_+_83664370_83664376	0.170693	HMX1.p2	AK004837|Hnf1b|21410|HNF1 homeobox B	NM_009330|Hnf1b|21410|HNF1 homeobox B
mm9_v1_chr15_-_74686747_74686747	0.170324	HMX1.p2	BC116908|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	BC119321|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2	NM_009991|Cyp11b2|13072|cytochrome P450, family 11, subfamily b, polypeptide 2
mm9_v1_chr8_-_72877109_72877124	0.169998	HMX1.p2	BC052149|Upf1|19704|UPF1 regulator of nonsense transcripts homolog (yeast)
mm9_v1_chr3_+_95085263_95085296	0.16958	HMX1.p2	
mm9_v1_chr15_+_7760845_7761031	0.169335	HMX1.p2	D88264|Gdnf|14573|glial cell line derived neurotrophic factor	U75532|Gdnf|14573|glial cell line derived neurotrophic factor	NM_010275|Gdnf|14573|glial cell line derived neurotrophic factor	U37459|Gdnf|14573|glial cell line derived neurotrophic factor	BC119031|Gdnf|14573|glial cell line derived neurotrophic factor
mm9_v1_chr2_-_164630347_164630363	0.168165	HMX1.p2	AK033724|Acot8|170789|acyl-CoA thioesterase 8	BC005792|Acot8|170789|acyl-CoA thioesterase 8	AK151924|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr15_-_76500300_76500377	0.167518	HMX1.p2	AF079514|Foxh1|14106|forkhead box H1	AF110506|Foxh1|14106|forkhead box H1	AF177770|Foxh1|14106|forkhead box H1	AB221574|Foxh1|14106|forkhead box H1	AF069303|Foxh1|14106|forkhead box H1	NM_007989|Foxh1|14106|forkhead box H1	BC119156|Foxh1|14106|forkhead box H1	BC137781|Foxh1|14106|forkhead box H1
mm9_v1_chr11_-_78510874_78510941	0.167027	HMX1.p2	BC058652|Nlk|18099|nemo like kinase	NM_008702|Nlk|18099|nemo like kinase
mm9_v1_chr10_+_128242598_128242635	0.165044	HMX1.p2	AK168935|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK045445|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	BC011146|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr1_-_95698465_95698512	0.164917	HMX1.p2	AK088416|Dtymk|21915|deoxythymidylate kinase	AK019445|Dtymk|21915|deoxythymidylate kinase	AK160747|Dtymk|21915|deoxythymidylate kinase	BC069902|Dtymk|21915|deoxythymidylate kinase	AK009220|Dtymk|21915|deoxythymidylate kinase	AK019288|Dtymk|21915|deoxythymidylate kinase	NM_001105667|Dtymk|21915|deoxythymidylate kinase	NM_023136|Dtymk|21915|deoxythymidylate kinase
mm9_v1_chr18_+_33098694_33098843	0.164632	HMX1.p2	NM_009793|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	AK030219|Camk4|12326|calcium/calmodulin-dependent protein kinase IV	BC070420|Camk4|12326|calcium/calmodulin-dependent protein kinase IV
mm9_v1_chr2_+_69708777_69708824	0.164104	HMX1.p2	AK200405|Ssb|20823|Sjogren syndrome antigen B
mm9_v1_chr15_-_13103346_13103429	0.163843	HMX1.p2	NM_007666|Cdh6|12563|cadherin 6	AK134611|Cdh6|12563|cadherin 6
mm9_v1_chr2_+_130401908_130401945	0.163802	HMX1.p2	AK003042|Oxt|18429|oxytocin	NM_011025|Oxt|18429|oxytocin	BC117030|Oxt|18429|oxytocin	BC117032|Oxt|18429|oxytocin	AF483508|Oxt|18429|oxytocin	AF483509|Oxt|18429|oxytocin
mm9_v1_chr1_+_55144949_55145013	0.16343	HMX1.p2	NM_008303|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr11_+_96790581_96790782	0.163327	HMX1.p2	AK090284|Prr15l|217138|proline rich 15-like	BC034213|Prr15l|217138|proline rich 15-like	AK077279|Prr15l|217138|proline rich 15-like	BC022765|Prr15l|217138|proline rich 15-like	NM_146026|Prr15l|217138|proline rich 15-like	BC036171|Prr15l|217138|proline rich 15-like	BC034192|Prr15l|217138|proline rich 15-like	BC024510|Prr15l|217138|proline rich 15-like	AK087566|Prr15l|217138|proline rich 15-like
mm9_v1_chr13_-_47025086_47025155	0.16295	HMX1.p2	AB037923|Kif13a|16553|kinesin family member 13A	NM_010617|Kif13a|16553|kinesin family member 13A
mm9_v1_chrX_+_7419025_7419257	0.162929	HMX1.p2	AK010750|Otud5|54644|OTU domain containing 5	AK149777|Otud5|54644|OTU domain containing 5	AK171874|Otud5|54644|OTU domain containing 5	BC051111|Otud5|54644|OTU domain containing 5	AK169921|Otud5|54644|OTU domain containing 5
mm9_v1_chr1_-_169396910_169396910	0.162787	HMX1.p2	BC087947|Lrrc52|240899|leucine rich repeat containing 52	NM_001013382|Lrrc52|240899|leucine rich repeat containing 52
mm9_v1_chr7_+_109850836_109850868	0.161639	HMX1.p2	AK141545|Olfr558|259097|olfactory receptor 558	NM_147093|Olfr558|259097|olfactory receptor 558
mm9_v1_chr4_-_117354829_117354891	0.15989	HMX1.p2	AF438610|Dmap1|66233|DNA methyltransferase 1-associated protein 1	NM_023178|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK012055|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK005270|Dmap1|66233|DNA methyltransferase 1-associated protein 1
mm9_v1_chrX_+_8610611_8610618	0.159407	HMX1.p2	NM_031261|Fthl17|83457|ferritin, heavy polypeptide-like 17	AF285569|Fthl17|83457|ferritin, heavy polypeptide-like 17
mm9_v1_chr2_-_69723644_69723671	0.158402	HMX1.p2	AK013063|Mettl5|75422|methyltransferase like 5	AK133594|Mettl5|75422|methyltransferase like 5	NM_029280|Mettl5|75422|methyltransferase like 5
mm9_v1_chr7_-_111161213_111161263	0.157894	HMX1.p2	NM_147084|Olfr639|259088|olfactory receptor 639	BC145837|Olfr639|259088|olfactory receptor 639
mm9_v1_chr1_-_95698320_95698458	0.157445	HMX1.p2	AK210481|Dtymk|21915|deoxythymidylate kinase	AK019284|Dtymk|21915|deoxythymidylate kinase	BC030178|Dtymk|21915|deoxythymidylate kinase	S82852|Dtymk|21915|deoxythymidylate kinase	S82853|Dtymk|21915|deoxythymidylate kinase	AK011955|Dtymk|21915|deoxythymidylate kinase
mm9_v1_chr13_+_78337168_78337277	0.156568	HMX1.p2	AK082108|A830082K12Rik|320174|RIKEN cDNA A830082K12 gene
mm9_v1_chr2_+_180954720_180954720	0.155061	HMX1.p2	BC051628|BC051628|332713|cDNA sequence BC051628	NM_199312|BC051628|332713|cDNA sequence BC051628
mm9_v1_chr11_-_94103862_94104034	0.154358	HMX1.p2	AY308804|Wfikkn2|278507|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2	BC113144|Wfikkn2|278507|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2	NM_181819|Wfikkn2|278507|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2	AY100450|Wfikkn2|278507|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
mm9_v1_chr3_-_58495986_58496041	0.153729	HMX1.p2	Z19581|Siah2|20439|seven in absentia 2
mm9_v1_chr17_-_36305466_36305481	0.153482	HMX1.p2	NM_001081032|Gm8909|667977|predicted gene 8909	AB359231|Gm8909|667977|predicted gene 8909
mm9_v1_chr15_+_59480204_59480213	0.153078	HMX1.p2	AK033358|Trib1|211770|tribbles homolog 1 (Drosophila)	AK028626|Trib1|211770|tribbles homolog 1 (Drosophila)	AK040738|Trib1|211770|tribbles homolog 1 (Drosophila)	AK041212|Trib1|211770|tribbles homolog 1 (Drosophila)	AK162876|Trib1|211770|tribbles homolog 1 (Drosophila)	NM_144549|Trib1|211770|tribbles homolog 1 (Drosophila)
mm9_v1_chr8_+_97269489_97269622	0.152915	HMX1.p2	AF052505|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155083|Ccl22|20299|chemokine (C-C motif) ligand 22	AK156627|Ccl22|20299|chemokine (C-C motif) ligand 22	AK170080|Ccl22|20299|chemokine (C-C motif) ligand 22	NM_009137|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155764|Ccl22|20299|chemokine (C-C motif) ligand 22	BC012658|Ccl22|20299|chemokine (C-C motif) ligand 22	AF076596|Ccl22|20299|chemokine (C-C motif) ligand 22	AJ238238|Ccl22|20299|chemokine (C-C motif) ligand 22	AF163476|Ccl22|20299|chemokine (C-C motif) ligand 22
mm9_v1_chr8_+_107937521_107937521	0.152732	HMX1.p2	NM_001170788|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr11_-_82684245_82684245	0.151983	HMX1.p2	AK128983|Rffl|67338|ring finger and FYVE like domain containing protein	NM_001164570|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr15_-_75950624_75950768	0.151625	HMX1.p2	AY312170|Eppk1|223650|epiplakin 1	NM_144848|Eppk1|223650|epiplakin 1	BC090394|BC024139|271278|cDNA sequence BC024139
mm9_v1_chrX_+_21292025_21292267	0.150949	HMX1.p2	NM_020049|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AF161714|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AF320226|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AK018553|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	BC129908|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	BC129909|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AB033285|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14
mm9_v1_chr13_+_83643032_83643032	0.150263	HMX1.p2	NM_001170537|Mef2c|17260|myocyte enhancer factor 2C	NM_025282|Mef2c|17260|myocyte enhancer factor 2C
mm9_v1_chr7_+_148021503_148021519	0.148993	HMX1.p2	DQ225768|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr3_-_108003697_108003757	0.148372	HMX1.p2	AK087683|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC060107|Cyb561d1|72023|cytochrome b-561 domain containing 1	BC137590|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_001081320|Cyb561d1|72023|cytochrome b-561 domain containing 1	NM_028061|Cyb561d1|72023|cytochrome b-561 domain containing 1	AK164441|Cyb561d1|72023|cytochrome b-561 domain containing 1
mm9_v1_chr11_+_29447949_29448025	0.148314	HMX1.p2	AK006591|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	NM_001163521|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	NM_028504|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	BC137683|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene	BC144828|1700034F02Rik|73324|RIKEN cDNA 1700034F02 gene
mm9_v1_chr13_+_112476313_112476385	0.148175	HMX1.p2	AK147427|Mier3|218613|mesoderm induction early response 1, family member 3	NM_172593|Mier3|218613|mesoderm induction early response 1, family member 3
mm9_v1_chr12_+_10397567_10397637	0.148155	HMX1.p2	NM_023697|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	AF303831|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	BC092299|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	BC020094|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)	AK014097|Rdh14|105014|retinol dehydrogenase 14 (all-trans and 9-cis)
mm9_v1_chr7_+_129776837_129777102	0.147904	HMX1.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr9_-_58388489_58388746	0.147822	HMX1.p2	AK031354|Cd276|102657|CD276 antigen	AY190318|Cd276|102657|CD276 antigen	BC019436|Cd276|102657|CD276 antigen	BC056608|Cd276|102657|CD276 antigen	NM_133983|Cd276|102657|CD276 antigen
mm9_v1_chrX_-_104035877_104035981	0.147568	HMX1.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr9_+_118972535_118972604	0.146499	HMX1.p2	BC022664|Vill|22351|villin-like	AK166652|Vill|22351|villin-like
mm9_v1_chr10_+_128242649_128242744	0.146463	HMX1.p2	AK159388|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK083878|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK032681|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK017830|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK082579|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	NM_028873|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr17_+_24665193_24665201	0.145617	HMX1.p2	AK011460|2610019E17Rik|75614|RIKEN cDNA 2610019E17 gene
mm9_v1_chr7_-_142129892_142130112	0.1453	HMX1.p2	BC158077|Fam196a|627214|family with sequence similarity 196, member A	BC158080|Fam196a|627214|family with sequence similarity 196, member A	AK046823|Fam196a|627214|family with sequence similarity 196, member A	AK046846|Fam196a|627214|family with sequence similarity 196, member A	AK140373|Fam196a|627214|family with sequence similarity 196, member A	NM_001143802|Fam196a|627214|family with sequence similarity 196, member A
mm9_v1_chr9_+_50302624_50302649	0.145274	HMX1.p2	AK005558|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AY364436|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	NM_029639|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	AK002767|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC017624|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene	BC022950|1600029D21Rik|76509|RIKEN cDNA 1600029D21 gene
mm9_v1_chr13_-_43399540_43399575	0.144904	HMX1.p2	AK147458|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1	NM_001033399|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1
mm9_v1_chr12_-_77470450_77470546	0.144293	HMX1.p2	NM_001172104|Zbtb25|109929|zinc finger and BTB domain containing 25	AK137486|Zbtb25|109929|zinc finger and BTB domain containing 25	NM_028356|Zbtb25|109929|zinc finger and BTB domain containing 25
mm9_v1_chr9_+_107809219_107809237	0.143696	HMX1.p2	NM_009074|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	X74736|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	AK053655|Mst1r|19882|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
mm9_v1_chr7_-_52391649_52391688	0.143673	HMX1.p2	U04807|Flt3l|14256|FMS-like tyrosine kinase 3 ligand
mm9_v1_chrX_+_10294707_10294726	0.143538	HMX1.p2	AK131619|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK014143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr16_+_13256573_13256634	0.143536	HMX1.p2	NM_001122667|Mkl2|239719|MKL/myocardin-like 2	X66901|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr14_+_68334154_68334168	0.143422	HMX1.p2	AK158922|Kctd9|105440|potassium channel tetramerisation domain containing 9	NM_001111028|Kctd9|105440|potassium channel tetramerisation domain containing 9	NM_134073|Kctd9|105440|potassium channel tetramerisation domain containing 9
mm9_v1_chr10_-_122633922_122634056	0.142642	HMX1.p2	L10903|Usp15|14479|ubiquitin specific peptidase 15	AF468037|Usp15|14479|ubiquitin specific peptidase 15	AK145749|Usp15|14479|ubiquitin specific peptidase 15	NM_027604|Usp15|14479|ubiquitin specific peptidase 15	AK046332|Usp15|14479|ubiquitin specific peptidase 15	AK083303|Usp15|14479|ubiquitin specific peptidase 15	AK133852|Usp15|14479|ubiquitin specific peptidase 15	AK122301|Usp15|14479|ubiquitin specific peptidase 15	BC050042|Usp15|14479|ubiquitin specific peptidase 15	AK164382|Usp15|14479|ubiquitin specific peptidase 15	AK163315|Usp15|14479|ubiquitin specific peptidase 15	AK168755|Usp15|14479|ubiquitin specific peptidase 15	AK161469|Usp15|14479|ubiquitin specific peptidase 15	AK161957|Usp15|14479|ubiquitin specific peptidase 15	AK163284|Usp15|14479|ubiquitin specific peptidase 15
mm9_v1_chr2_-_181022670_181022690	0.142484	HMX1.p2	BC059066|Gmeb2|229004|glucocorticoid modulatory element binding protein 2	NM_198169|Gmeb2|229004|glucocorticoid modulatory element binding protein 2
mm9_v1_chr14_+_55551531_55551607	0.142384	HMX1.p2	BC120568|Il25|140806|interleukin 25	BC125524|Il25|140806|interleukin 25	BC144962|Il25|140806|interleukin 25	NM_080729|Il25|140806|interleukin 25	AF458060|Il25|140806|interleukin 25
mm9_v1_chr2_+_3201446_3201559	0.141581	HMX1.p2	AK161490|Nmt2|18108|N-myristoyltransferase 2	AK168171|Nmt2|18108|N-myristoyltransferase 2	AK168190|Nmt2|18108|N-myristoyltransferase 2	AK134521|Nmt2|18108|N-myristoyltransferase 2	AK044213|Nmt2|18108|N-myristoyltransferase 2	AF043327|Nmt2|18108|N-myristoyltransferase 2	BC037647|Nmt2|18108|N-myristoyltransferase 2	NM_008708|Nmt2|18108|N-myristoyltransferase 2
mm9_v1_chr5_+_15124916_15124916	0.139343	HMX1.p2	AK017002|Speer4d|360220|spermatogenesis associated glutamate (E)-rich protein 4d	NM_025759|Speer4d|360220|spermatogenesis associated glutamate (E)-rich protein 4d
mm9_v1_chr5_-_89104575_89104676	0.137808	HMX1.p2	AK168385|Grsf1|231413|G-rich RNA sequence binding factor 1	AK168459|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_001098476|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr3_+_32716447_32716547	0.137206	HMX1.p2	AK135141|Usp13|72607|ubiquitin specific peptidase 13 (isopeptidase T-3)	BC090999|Usp13|72607|ubiquitin specific peptidase 13 (isopeptidase T-3)	NM_001013024|Usp13|72607|ubiquitin specific peptidase 13 (isopeptidase T-3)
mm9_v1_chr4_-_115840142_115840210	0.137178	HMX1.p2	BC003448|Tspan1|66805|tetraspanin 1	AK007428|Tspan1|66805|tetraspanin 1	AK078869|Tspan1|66805|tetraspanin 1	AK162521|Tspan1|66805|tetraspanin 1	NM_133681|Tspan1|66805|tetraspanin 1
mm9_v1_chr7_+_3293008_3293247	0.137064	HMX1.p2	NM_001093766|Myadm|50918|myeloid-associated differentiation marker	BC119364|Myadm|50918|myeloid-associated differentiation marker	BC119368|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr1_-_173152634_173152646	0.136923	HMX1.p2	AK028388|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)	NM_001037170|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr14_-_54902599_54902599	0.136523	HMX1.p2	BC145891|Olfr49|18348|olfactory receptor 49	BC145893|Olfr49|18348|olfactory receptor 49	NM_010991|Olfr49|18348|olfactory receptor 49
mm9_v1_chr16_+_48283847_48283930	0.132787	HMX1.p2	AK033197|Dppa4|73693|developmental pluripotency associated 4	NM_001018002|Dppa4|73693|developmental pluripotency associated 4	NM_028610|Dppa4|73693|developmental pluripotency associated 4	AK010753|Dppa4|73693|developmental pluripotency associated 4	BC064754|Dppa4|73693|developmental pluripotency associated 4	AF490348|Dppa4|73693|developmental pluripotency associated 4
mm9_v1_chr4_-_132383213_132383408	0.1313	HMX1.p2	AK198369|Ppp1r8|100336|protein phosphatase 1, regulatory (inhibitor) subunit 8
mm9_v1_chr10_+_101621712_101621712	0.131211	HMX1.p2	AK032009|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_001162369|Mgat4c|67569|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm9_v1_chr6_+_100654716_100654748	0.130345	HMX1.p2	BC049816|Gxylt2|232313|glucoside xylosyltransferase 2	NM_198612|Gxylt2|232313|glucoside xylosyltransferase 2	AK144790|Gxylt2|232313|glucoside xylosyltransferase 2
mm9_v1_chr15_+_102038697_102038697	0.130179	HMX1.p2	BC030410|Zfp740|68744|zinc finger protein 740	NM_153194|Zfp740|68744|zinc finger protein 740
mm9_v1_chr6_-_142271469_142271500	0.129505	HMX1.p2	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr2_+_152891690_152891738	0.129296	HMX1.p2	BC020535|BC020535|228788|cDNA sequence BC020535	NM_145536|BC020535|228788|cDNA sequence BC020535
mm9_v1_chr8_+_82235708_82235749	0.128829	HMX1.p2	BC031460|Anapc10|68999|anaphase promoting complex subunit 10	NM_026904|Anapc10|68999|anaphase promoting complex subunit 10	AK219569|Anapc10|68999|anaphase promoting complex subunit 10	AK041373|Anapc10|68999|anaphase promoting complex subunit 10
mm9_v1_chr2_+_32127324_32127335	0.128185	HMX1.p2	NM_001195765|Gm13611|622534|predicted gene 13611
mm9_v1_chr4_+_128561383_128561383	0.127066	HMX1.p2	BC049095|Trim62|67525|tripartite motif-containing 62	NM_178110|Trim62|67525|tripartite motif-containing 62
mm9_v1_chr7_+_62090614_62090614	0.126957	HMX1.p2	AY164459|Luzp2|233271|leucine zipper protein 2	NM_178705|Luzp2|233271|leucine zipper protein 2
mm9_v1_chr14_-_34965604_34965674	0.126146	HMX1.p2	BC132395|Ppyr1|19065|pancreatic polypeptide receptor 1	BC145981|Ppyr1|19065|pancreatic polypeptide receptor 1	NM_008919|Ppyr1|19065|pancreatic polypeptide receptor 1	AK144461|Ppyr1|19065|pancreatic polypeptide receptor 1	AK035505|Ppyr1|19065|pancreatic polypeptide receptor 1
mm9_v1_chr9_-_35419452_35419469	0.125834	HMX1.p2	AK020540|Pate4|56872|prostate and testis expressed 4	BC120764|Pate4|56872|prostate and testis expressed 4	BC120766|Pate4|56872|prostate and testis expressed 4	NM_020264|Pate4|56872|prostate and testis expressed 4
mm9_v1_chr17_-_26056379_26056705	0.125679	HMX1.p2	AB232639|Rab40c|224624|Rab40c, member RAS oncogene family	AF422144|Rab40c|224624|Rab40c, member RAS oncogene family	BC037461|Rab40c|224624|Rab40c, member RAS oncogene family	BC027008|Rab40c|224624|Rab40c, member RAS oncogene family	NM_139154|Rab40c|224624|Rab40c, member RAS oncogene family
mm9_v1_chr19_+_42164922_42164992	0.124344	HMX1.p2	NM_145501|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	AK030725|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC110363|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha	BC089309|Pi4k2a|84095|phosphatidylinositol 4-kinase type 2 alpha
mm9_v1_chr11_-_5344795_5344912	0.123899	HMX1.p2	AK163639|Znrf3|407821|zinc and ring finger 3	NM_001080924|Znrf3|407821|zinc and ring finger 3
mm9_v1_chr15_+_102275797_102275866	0.123366	HMX1.p2	NM_144547|Amhr2|110542|anti-Mullerian hormone type 2 receptor	AF503863|Amhr2|110542|anti-Mullerian hormone type 2 receptor	BC119571|Amhr2|110542|anti-Mullerian hormone type 2 receptor
mm9_v1_chr2_-_29949088_29949167	0.123343	HMX1.p2	AK004475|Zdhhc12|66220|zinc finger, DHHC domain containing 12	BC021432|Zdhhc12|66220|zinc finger, DHHC domain containing 12	AK013074|Zdhhc12|66220|zinc finger, DHHC domain containing 12	NM_001037762|Zdhhc12|66220|zinc finger, DHHC domain containing 12	NM_025428|Zdhhc12|66220|zinc finger, DHHC domain containing 12	AK087676|Zdhhc12|66220|zinc finger, DHHC domain containing 12
mm9_v1_chr19_+_45005608_45005655	0.122768	HMX1.p2	NM_001081225|Fam178a|226151|family with sequence similarity 178, member A	AK031688|Fam178a|226151|family with sequence similarity 178, member A	AK147588|Fam178a|226151|family with sequence similarity 178, member A	AK020064|Fam178a|226151|family with sequence similarity 178, member A	AK045983|Fam178a|226151|family with sequence similarity 178, member A
mm9_v1_chr3_-_58689068_58689133	0.121423	HMX1.p2	AK041623|Clrn1|229320|clarin 1	AK042523|Clrn1|229320|clarin 1	BC132254|Clrn1|229320|clarin 1	BC132256|Clrn1|229320|clarin 1	BC145202|Clrn1|229320|clarin 1	AF495718|Clrn1|229320|clarin 1	AF495719|Clrn1|229320|clarin 1	AF495720|Clrn1|229320|clarin 1	NM_153384|Clrn1|229320|clarin 1	NM_153385|Clrn1|229320|clarin 1	NM_153386|Clrn1|229320|clarin 1
mm9_v1_chr11_+_101037415_101037470	0.121418	HMX1.p2	AF039833|Cntnap1|53321|contactin associated protein-like 1	NM_016782|Cntnap1|53321|contactin associated protein-like 1
mm9_v1_chr10_-_117147757_117147818	0.12047	HMX1.p2	AK168690|Mdm2|17246|transformed mouse 3T3 cell double minute 2	BC092270|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK004719|Mdm2|17246|transformed mouse 3T3 cell double minute 2	NM_010786|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chr11_+_95343299_95343327	0.120401	HMX1.p2	
mm9_v1_chr9_-_78327792_78327880	0.120162	HMX1.p2	BC040689|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK187140|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK206299|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK209036|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK213893|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1	AK210348|Eef1a1|13627|eukaryotic translation elongation factor 1 alpha 1
mm9_v1_chr8_+_15011221_15011301	0.118958	HMX1.p2	AK019339|Kbtbd11|74901|kelch repeat and BTB (POZ) domain containing 11
mm9_v1_chr10_-_92185071_92185164	0.118814	HMX1.p2	BC066870|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	D10712|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK090040|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK048393|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK085355|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	BC052430|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK010591|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	NM_008682|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1	AK153746|Nedd1|17997|neural precursor cell expressed, developmentally down-regulated gene 1
mm9_v1_chr11_+_78085325_78085440	0.118661	HMX1.p2	BC040464|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr11_-_103611082_103611134	0.118271	HMX1.p2	AF469004|Wnt9b|22412|wingless-type MMTV integration site 9B	AB073819|Wnt9b|22412|wingless-type MMTV integration site 9B	BC110482|Wnt9b|22412|wingless-type MMTV integration site 9B	AK052708|Wnt9b|22412|wingless-type MMTV integration site 9B	NM_011719|Wnt9b|22412|wingless-type MMTV integration site 9B
mm9_v1_chr1_-_154749751_154749796	0.117493	HMX1.p2	BC082789|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	BC086651|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001005507|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	NM_001160256|Smg7|226517|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr4_+_148859321_148859391	0.117245	HMX1.p2	AK146824|Lzic|69151|leucine zipper and CTNNBIP1 domain containing
mm9_v1_chr1_+_167390705_167390767	0.116543	HMX1.p2	AK147721|Brp44|70456|brain protein 44	AK147792|Brp44|70456|brain protein 44
mm9_v1_chr2_+_158157639_158157652	0.116431	HMX1.p2	AJ010499|Lbp|16803|lipopolysaccharide binding protein
mm9_v1_chr12_+_77634546_77634606	0.116015	HMX1.p2	AK080928|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	NM_153804|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	BC096443|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3	AK162025|Plekhg3|263406|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
mm9_v1_chr4_+_135495085_135495162	0.115499	HMX1.p2	AK177120|Fuca1|71665|fucosidase, alpha-L- 1, tissue
mm9_v1_chr6_-_50332835_50332835	0.115406	HMX1.p2	AK004768|Osbpl3|71720|oxysterol binding protein-like 3	AK037114|Osbpl3|71720|oxysterol binding protein-like 3	NM_027881|Osbpl3|71720|oxysterol binding protein-like 3
mm9_v1_chr3_+_36762025_36762077	0.115258	HMX1.p2	AK172264|4932438A13Rik|229227|RIKEN cDNA 4932438A13 gene	NM_172679|4932438A13Rik|229227|RIKEN cDNA 4932438A13 gene	AK030086|4932438A13Rik|229227|RIKEN cDNA 4932438A13 gene	AK041411|4932438A13Rik|229227|RIKEN cDNA 4932438A13 gene	AK220265|4932438A13Rik|229227|RIKEN cDNA 4932438A13 gene
mm9_v1_chr19_+_60831889_60831889	0.114365	HMX1.p2	BC085512|Nanos1|332397|nanos homolog 1 (Drosophila)	NM_178421|Nanos1|332397|nanos homolog 1 (Drosophila)
mm9_v1_chr16_-_37539763_37539874	0.114174	HMX1.p2	AK080478|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK154283|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK031528|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK011543|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	NM_028812|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	AK084978|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)	BC056966|Gtf2e1|74197|general transcription factor II E, polypeptide 1 (alpha subunit)
mm9_v1_chr9_-_77392505_77392711	0.113774	HMX1.p2	BC087542|Lrrc1|214345|leucine rich repeat containing 1	AK079854|Lrrc1|214345|leucine rich repeat containing 1	BC046591|Lrrc1|214345|leucine rich repeat containing 1	AK051043|Lrrc1|214345|leucine rich repeat containing 1	AK147075|Lrrc1|214345|leucine rich repeat containing 1	NM_001146048|Lrrc1|214345|leucine rich repeat containing 1	AK220166|Lrrc1|214345|leucine rich repeat containing 1
mm9_v1_chr3_+_102975621_102975695	0.11345	HMX1.p2	NM_026602|Bcas2|68183|breast carcinoma amplified sequence 2	BC013627|Bcas2|68183|breast carcinoma amplified sequence 2	BC037062|Bcas2|68183|breast carcinoma amplified sequence 2	AK018786|Bcas2|68183|breast carcinoma amplified sequence 2	AK005825|Bcas2|68183|breast carcinoma amplified sequence 2	AK020098|Bcas2|68183|breast carcinoma amplified sequence 2	AK153513|Bcas2|68183|breast carcinoma amplified sequence 2	AK166967|Bcas2|68183|breast carcinoma amplified sequence 2	AY043239|Bcas2|68183|breast carcinoma amplified sequence 2	BC023382|Bcas2|68183|breast carcinoma amplified sequence 2
mm9_v1_chr18_+_58819093_58819192	0.112414	HMX1.p2	AK165542|Isoc1|66307|isochorismatase domain containing 1	BC016576|Isoc1|66307|isochorismatase domain containing 1	AY035213|Isoc1|66307|isochorismatase domain containing 1	NM_025478|Isoc1|66307|isochorismatase domain containing 1	AK134794|Isoc1|66307|isochorismatase domain containing 1	AK152763|Isoc1|66307|isochorismatase domain containing 1	AK153257|Isoc1|66307|isochorismatase domain containing 1
mm9_v1_chr17_-_28046158_28046190	0.112222	HMX1.p2	AK133851|Taf11|68776|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr11_+_4118227_4118272	0.112045	HMX1.p2	AK170245|Gatsl3|71962|GATS protein-like 3	BC039988|Gatsl3|71962|GATS protein-like 3	NM_028022|Gatsl3|71962|GATS protein-like 3	AK010455|Gatsl3|71962|GATS protein-like 3
mm9_v1_chr3_+_51288108_51288406	0.111771	HMX1.p2	AK087967|Rab33b|19338|RAB33B, member of RAS oncogene family	AK144706|Rab33b|19338|RAB33B, member of RAS oncogene family	AK004974|Rab33b|19338|RAB33B, member of RAS oncogene family	AK159674|Rab33b|19338|RAB33B, member of RAS oncogene family	AB232629|Rab33b|19338|RAB33B, member of RAS oncogene family	AK170483|Rab33b|19338|RAB33B, member of RAS oncogene family	AK203331|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr7_-_31514527_31514579	0.11072	HMX1.p2	AK010168|Tmem147|69804|transmembrane protein 147	AK160267|Tmem147|69804|transmembrane protein 147	NM_027215|Tmem147|69804|transmembrane protein 147
mm9_v1_chr1_-_121545158_121545240	0.110565	HMX1.p2	BC003937|Epb4.1l5|226352|erythrocyte protein band 4.1-like 5
mm9_v1_chr5_-_147606370_147606581	0.110247	HMX1.p2	AK035629|Usp12|22217|ubiquitin specific peptidase 12	AK167153|Usp12|22217|ubiquitin specific peptidase 12	BC068136|Usp12|22217|ubiquitin specific peptidase 12	NM_011669|Usp12|22217|ubiquitin specific peptidase 12	AK006739|Usp12|22217|ubiquitin specific peptidase 12
mm9_v1_chr7_+_106614513_106614536	0.109878	HMX1.p2	NM_028145|Klhl35|72184|kelch-like 35 (Drosophila)	AK013012|Klhl35|72184|kelch-like 35 (Drosophila)
mm9_v1_chr9_-_58052107_58052125	0.109842	HMX1.p2	NM_001161541|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr5_-_144984420_144984479	0.109629	HMX1.p2	AK032858|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK034020|Tecpr1|70381|tectonin beta-propeller repeat containing 1	BC046968|Tecpr1|70381|tectonin beta-propeller repeat containing 1	NM_027410|Tecpr1|70381|tectonin beta-propeller repeat containing 1	AK163522|Tecpr1|70381|tectonin beta-propeller repeat containing 1
mm9_v1_chr14_+_37868015_37868020	0.109388	HMX1.p2	AK044631|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	NM_146245|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1	BC032270|Lrit1|239037|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
mm9_v1_chr8_-_49075838_49075874	0.109099	HMX1.p2	AK147944|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr10_-_117147722_117147744	0.108148	HMX1.p2	X58876|Mdm2|17246|transformed mouse 3T3 cell double minute 2	BC050902|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK004881|Mdm2|17246|transformed mouse 3T3 cell double minute 2	AK088638|Mdm2|17246|transformed mouse 3T3 cell double minute 2
mm9_v1_chr11_-_106640755_106640876	0.107879	HMX1.p2	AF177202|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC119131|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	BC144810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK042777|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK041591|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK164730|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	AK169977|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit	NM_015810|Polg2|50776|polymerase (DNA directed), gamma 2, accessory subunit
mm9_v1_chr17_-_34764041_34764054	0.107236	HMX1.p2	BC013462|Ppt2|54397|palmitoyl-protein thioesterase 2	NM_019441|Ppt2|54397|palmitoyl-protein thioesterase 2
mm9_v1_chr3_+_92748407_92748407	0.107185	HMX1.p2	AF176515|Lce3c|94060|late cornified envelope 3C	AK009036|Lce3c|94060|late cornified envelope 3C	NM_033175|Lce3c|94060|late cornified envelope 3C
mm9_v1_chr4_+_132796732_132796805	0.106902	HMX1.p2	AB021861|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6	NM_016693|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6	BC120565|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6	BC125577|Map3k6|53608|mitogen-activated protein kinase kinase kinase 6
mm9_v1_chr9_-_116084547_116084563	0.106688	HMX1.p2	AK043619|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr10_+_82448214_82448242	0.10593	HMX1.p2	NM_021439|Chst11|58250|carbohydrate sulfotransferase 11	AJ289133|Chst11|58250|carbohydrate sulfotransferase 11
mm9_v1_chr2_+_24805264_24805356	0.105882	HMX1.p2	AK088063|Zmynd19|67187|zinc finger, MYND domain containing 19	AK012484|Zmynd19|67187|zinc finger, MYND domain containing 19	NM_026021|Zmynd19|67187|zinc finger, MYND domain containing 19	AK005908|Zmynd19|67187|zinc finger, MYND domain containing 19	BC027321|Zmynd19|67187|zinc finger, MYND domain containing 19	AJ409150|Zmynd19|67187|zinc finger, MYND domain containing 19
mm9_v1_chr15_-_93349866_93349962	0.105648	HMX1.p2	BC117892|Prickle1|106042|prickle homolog 1 (Drosophila)	BC117893|Prickle1|106042|prickle homolog 1 (Drosophila)	AK147883|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr3_+_88981372_88981433	0.105025	HMX1.p2	AK146204|Scamp3|24045|secretory carrier membrane protein 3	NM_011886|Scamp3|24045|secretory carrier membrane protein 3	BC002021|Scamp3|24045|secretory carrier membrane protein 3	AK160549|Scamp3|24045|secretory carrier membrane protein 3	AK135335|Scamp3|24045|secretory carrier membrane protein 3
mm9_v1_chr7_+_125999265_125999288	0.104912	HMX1.p2	AK132322|Iqck|434232|IQ motif containing K	AK143223|Iqck|434232|IQ motif containing K	AK138400|Iqck|434232|IQ motif containing K	NM_001081446|Iqck|434232|IQ motif containing K
mm9_v1_chr4_+_128964928_128964982	0.10448	HMX1.p2	AJ251641|Sync|68828|syncoilin	BC106855|Sync|68828|syncoilin	FJ752162|Sync|68828|syncoilin	FJ752163|Sync|68828|syncoilin	FJ752164|Sync|68828|syncoilin
mm9_v1_chr5_-_33617477_33617628	0.104313	HMX1.p2	AK182443|Ctbp1|13016|C-terminal binding protein 1	AK189146|Ctbp1|13016|C-terminal binding protein 1	AJ010483|Ctbp1|13016|C-terminal binding protein 1	BC015071|Ctbp1|13016|C-terminal binding protein 1	AK165276|Ctbp1|13016|C-terminal binding protein 1	AB033122|Ctbp1|13016|C-terminal binding protein 1	AK133816|Ctbp1|13016|C-terminal binding protein 1	BC042425|Ctbp1|13016|C-terminal binding protein 1
mm9_v1_chr15_-_103045710_103045798	0.104069	HMX1.p2	X99641|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK018349|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030442|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK032975|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	AK030366|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_001110216|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)	NM_007626|Cbx5|12419|chromobox homolog 5 (Drosophila HP1a)
mm9_v1_chr10_-_102491392_102491410	0.10404	HMX1.p2	BC052200|Alx1|216285|ALX homeobox 1	AK047846|Alx1|216285|ALX homeobox 1	NM_172553|Alx1|216285|ALX homeobox 1
mm9_v1_chr8_+_86525604_86525604	0.103611	HMX1.p2	BC147276|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC147277|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172025|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	BC172026|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene	NM_183097|1700067K01Rik|73453|RIKEN cDNA 1700067K01 gene
mm9_v1_chr9_-_100446544_100446556	0.10347	HMX1.p2	AF043259|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr6_-_91361356_91361402	0.102024	HMX1.p2	BC049093|Wnt7a|22421|wingless-related MMTV integration site 7A	BC057586|Wnt7a|22421|wingless-related MMTV integration site 7A	AK004683|Wnt7a|22421|wingless-related MMTV integration site 7A	NM_009527|Wnt7a|22421|wingless-related MMTV integration site 7A
mm9_v1_chr12_+_56499761_56499884	0.101656	HMX1.p2	NM_011968|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK152915|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK088143|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	AK161662|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	U60288|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6	BC086685|Psma6|26443|proteasome (prosome, macropain) subunit, alpha type 6
mm9_v1_chr2_+_153117135_153117203	0.101598	HMX1.p2	NM_008444|Kif3b|16569|kinesin family member 3B	AK147467|Kif3b|16569|kinesin family member 3B	AK083700|Kif3b|16569|kinesin family member 3B	AK148200|Kif3b|16569|kinesin family member 3B	BC065132|Kif3b|16569|kinesin family member 3B	AK122258|Kif3b|16569|kinesin family member 3B	AK081541|Kif3b|16569|kinesin family member 3B
mm9_v1_chr9_+_99512920_99512920	0.101525	HMX1.p2	AK136425|A4gnt|333424|alpha-1,4-N-acetylglucosaminyltransferase	NM_001077424|A4gnt|333424|alpha-1,4-N-acetylglucosaminyltransferase
mm9_v1_chr12_-_114099102_114099167	0.101438	HMX1.p2	AK089866|Gpr132|56696|G protein-coupled receptor 132	AK153765|Gpr132|56696|G protein-coupled receptor 132	NM_019925|Gpr132|56696|G protein-coupled receptor 132	AK154509|Gpr132|56696|G protein-coupled receptor 132	AK157600|Gpr132|56696|G protein-coupled receptor 132	AF083442|Gpr132|56696|G protein-coupled receptor 132
mm9_v1_chr17_+_25910720_25910771	0.101141	HMX1.p2	AK145408|Narfl|67563|nuclear prelamin A recognition factor-like	NM_026238|Narfl|67563|nuclear prelamin A recognition factor-like	AK014038|Narfl|67563|nuclear prelamin A recognition factor-like	AK043694|Narfl|67563|nuclear prelamin A recognition factor-like	AK018548|Narfl|67563|nuclear prelamin A recognition factor-like	BC052830|Narfl|67563|nuclear prelamin A recognition factor-like	BC020468|Narfl|67563|nuclear prelamin A recognition factor-like	BC025108|Narfl|67563|nuclear prelamin A recognition factor-like
mm9_v1_chr2_+_131317581_131317728	0.100971	HMX1.p2	NM_001177833|Smox|228608|spermine oxidase	NM_001177834|Smox|228608|spermine oxidase	NM_001177835|Smox|228608|spermine oxidase	NM_001177836|Smox|228608|spermine oxidase	NM_001177837|Smox|228608|spermine oxidase	NM_001177838|Smox|228608|spermine oxidase	NM_001177839|Smox|228608|spermine oxidase	NM_001177840|Smox|228608|spermine oxidase	NM_145533|Smox|228608|spermine oxidase	AK143129|Smox|228608|spermine oxidase	AK159275|Smox|228608|spermine oxidase	AK159372|Smox|228608|spermine oxidase	AJ567473|Smox|228608|spermine oxidase	AJ567474|Smox|228608|spermine oxidase	AJ567475|Smox|228608|spermine oxidase	AJ567476|Smox|228608|spermine oxidase	AJ567477|Smox|228608|spermine oxidase	AJ567478|Smox|228608|spermine oxidase	AJ567479|Smox|228608|spermine oxidase	AJ567480|Smox|228608|spermine oxidase	BC004831|Smox|228608|spermine oxidase	AK166350|Smox|228608|spermine oxidase	AF495851|Smox|228608|spermine oxidase	AF495852|Smox|228608|spermine oxidase	AF495853|Smox|228608|spermine oxidase
mm9_v1_chr8_-_74998992_74999131	0.100441	HMX1.p2	BC032191|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK144328|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AF536541|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK049765|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK017525|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	BC020488|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	NM_138585|Cherp|27967|calcium homeostasis endoplasmic reticulum protein
mm9_v1_chr13_-_49404519_49404608	0.100301	HMX1.p2	AK157835|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3	NM_015759|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3	AF017369|Fgd3|30938|FYVE, RhoGEF and PH domain containing 3
mm9_v1_chr16_+_11313901_11314030	0.0999461	HMX1.p2	AF061505|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	NM_011608|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	AK020247|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17	BC027519|Tnfrsf17|21935|tumor necrosis factor receptor superfamily, member 17
mm9_v1_chr1_+_75518349_75518365	0.0990608	HMX1.p2	AK171989|Stk11ip|71728|serine/threonine kinase 11 interacting protein	BC042403|Stk11ip|71728|serine/threonine kinase 11 interacting protein
mm9_v1_chr12_-_57637894_57637894	0.0988715	HMX1.p2	BC057607|Nkx2-1|21869|NK2 homeobox 1	NM_009385|Nkx2-1|21869|NK2 homeobox 1
mm9_v1_chrX_-_102265380_102265463	0.0988497	HMX1.p2	AK153718|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC019699|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK017459|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085485|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085098|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084980|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC055463|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK080296|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK043766|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK047017|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084653|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK144934|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK157237|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK164650|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene
mm9_v1_chr19_+_6306456_6306644	0.0974487	HMX1.p2	NM_001033342|Cdc42bpg|240505|CDC42 binding protein kinase gamma (DMPK-like)
mm9_v1_chr9_+_100543993_100544033	0.097416	HMX1.p2	Z75332|Stag1|20842|stromal antigen 1	AK134316|Stag1|20842|stromal antigen 1
mm9_v1_chr7_-_117987922_117987942	0.0955927	HMX1.p2	AK006791|Rnf141|67150|ring finger protein 141
mm9_v1_chr5_-_123183537_123183571	0.0955206	HMX1.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr4_+_126699209_126699282	0.0954735	HMX1.p2	AF272847|Sfpq|71514|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm9_v1_chr19_+_18787654_18787754	0.0948198	HMX1.p2	AK145019|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK155389|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	AK083631|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	NM_177640|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene	BC020125|D030056L22Rik|225995|RIKEN cDNA D030056L22 gene
mm9_v1_chr8_-_73132125_73132308	0.0947089	HMX1.p2	BC002150|Ssbp4|76900|single stranded DNA binding protein 4	AK157387|Ssbp4|76900|single stranded DNA binding protein 4	AK154336|Ssbp4|76900|single stranded DNA binding protein 4	NM_133772|Ssbp4|76900|single stranded DNA binding protein 4
mm9_v1_chr11_+_100831192_100831209	0.0945395	HMX1.p2	AK009381|Ptrf|19285|polymerase I and transcript release factor
mm9_v1_chr1_-_138850206_138850206	0.0940132	HMX1.p2	DQ133942|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_001159769|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr9_-_20896404_20896431	0.0935499	HMX1.p2	BC108392|Raver1|71766|ribonucleoprotein, PTB-binding 1	BC058271|Raver1|71766|ribonucleoprotein, PTB-binding 1	NM_027911|Raver1|71766|ribonucleoprotein, PTB-binding 1
mm9_v1_chr17_+_36909854_36909854	0.0928083	HMX1.p2	AF539601|H2-M10.5|224761|histocompatibility 2, M region locus 10.5	AY211082|H2-M10.5|224761|histocompatibility 2, M region locus 10.5	NM_177637|H2-M10.5|224761|histocompatibility 2, M region locus 10.5
mm9_v1_chr8_-_49075724_49075738	0.0926267	HMX1.p2	AK086956|Wwc2|52357|WW, C2 and coiled-coil domain containing 2	AK079375|Wwc2|52357|WW, C2 and coiled-coil domain containing 2
mm9_v1_chr2_+_136716953_136716953	0.0920054	HMX1.p2	AK010392|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_028201|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr12_-_32635399_32635399	0.0914751	HMX1.p2	AK133127|Hbp1|73389|high mobility group box transcription factor 1	NM_153198|Hbp1|73389|high mobility group box transcription factor 1	NM_177993|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr7_+_31278675_31278685	0.0912198	HMX1.p2	AK011039|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK050141|Prodh2|56189|proline dehydrogenase (oxidase) 2	NM_019546|Prodh2|56189|proline dehydrogenase (oxidase) 2	U80019|Prodh2|56189|proline dehydrogenase (oxidase) 2	AK011020|Prodh2|56189|proline dehydrogenase (oxidase) 2
mm9_v1_chr9_+_72806591_72806665	0.0910167	HMX1.p2	AY428507|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	AY464142|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	NM_001163725|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	NM_026314|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	AK076862|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	AK161368|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)	BC026462|Dyx1c1|67685|dyslexia susceptibility 1 candidate 1 homolog (human)
mm9_v1_chr2_-_31701432_31701524	0.0906757	HMX1.p2	AK046338|Fibcd1|98970|fibrinogen C domain containing 1	AK084379|Fibcd1|98970|fibrinogen C domain containing 1	BC060634|Fibcd1|98970|fibrinogen C domain containing 1	NM_178887|Fibcd1|98970|fibrinogen C domain containing 1
mm9_v1_chr2_+_180234680_180234753	0.0896317	HMX1.p2	AB017027|Ntsr1|18216|neurotensin receptor 1	NM_018766|Ntsr1|18216|neurotensin receptor 1	BC087730|Ntsr1|18216|neurotensin receptor 1
mm9_v1_chr19_+_56948738_56948999	0.0876066	HMX1.p2	AK145058|Vwa2|240675|von Willebrand factor A domain containing 2	AK166339|Vwa2|240675|von Willebrand factor A domain containing 2	AK160971|Vwa2|240675|von Willebrand factor A domain containing 2	AJ536329|Vwa2|240675|von Willebrand factor A domain containing 2	NM_172840|Vwa2|240675|von Willebrand factor A domain containing 2	BC116636|Vwa2|240675|von Willebrand factor A domain containing 2	BC115868|Vwa2|240675|von Willebrand factor A domain containing 2	AK029297|Vwa2|240675|von Willebrand factor A domain containing 2	AK133486|Vwa2|240675|von Willebrand factor A domain containing 2
mm9_v1_chr9_-_20877907_20878057	0.08743	HMX1.p2	AK010211|Fdx1l|68165|ferredoxin 1-like	AK008401|Fdx1l|68165|ferredoxin 1-like	AK020979|Fdx1l|68165|ferredoxin 1-like	NM_001039824|Fdx1l|68165|ferredoxin 1-like	BC061189|Fdx1l|68165|ferredoxin 1-like	BC172154|Fdx1l|68165|ferredoxin 1-like
mm9_v1_chr17_+_72022808_72022818	0.0871932	HMX1.p2	AK158647|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr1_+_23768764_23768872	0.086508	HMX1.p2	AK052640|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	NM_172124|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AB055902|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AK048146|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	AK220433|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	BC056368|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)	BC058082|B3gat2|280645|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm9_v1_chr6_+_4697305_4697405	0.0864162	HMX1.p2	NM_001040611|Peg10|170676|paternally expressed 10	NM_130877|Peg10|170676|paternally expressed 10	AB091827|Peg10|170676|paternally expressed 10	AJ006464|Peg10|170676|paternally expressed 10
mm9_v1_chr6_-_83456775_83456962	0.0859244	HMX1.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr4_-_129296301_129296370	0.0844791	HMX1.p2	BC031493|Iqcc|230767|IQ motif containing C	NM_198026|Iqcc|230767|IQ motif containing C	AK083217|Iqcc|230767|IQ motif containing C
mm9_v1_chr10_+_93610663_93610767	0.084456	HMX1.p2	AK146891|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	NM_011629|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK053907|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC090662|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	BC094580|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1	AK149374|Nr2c1|22025|nuclear receptor subfamily 2, group C, member 1
mm9_v1_chr1_-_93309713_93309830	0.0844462	HMX1.p2	AF247040|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK146192|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AB035178|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AF260236|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	BC012897|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK013443|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK005022|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK155340|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK012582|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK076135|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	NM_019479|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK007480|Hes6|55927|hairy and enhancer of split 6 (Drosophila)
mm9_v1_chr5_-_123979739_123979846	0.083711	HMX1.p2	AK080345|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr11_+_46337752_46337752	0.0835156	HMX1.p2	NM_001163357|Gm12169|210535|predicted gene 12169
mm9_v1_chr5_+_91456489_91456542	0.0833872	HMX1.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr8_+_109417539_109417610	0.0830545	HMX1.p2	NM_011574|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	BC068113|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK144455|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK146263|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK150862|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK168470|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK173318|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)
mm9_v1_chr19_+_45005658_45005755	0.0825007	HMX1.p2	BC150999|Fam178a|226151|family with sequence similarity 178, member A	BC157937|Fam178a|226151|family with sequence similarity 178, member A	BC172097|Fam178a|226151|family with sequence similarity 178, member A
mm9_v1_chr15_-_73537796_73537934	0.082493	HMX1.p2	BC117783|Gpr20|239530|G protein-coupled receptor 20	AK040547|Gpr20|239530|G protein-coupled receptor 20	NM_173365|Gpr20|239530|G protein-coupled receptor 20
mm9_v1_chr4_-_135050358_135050475	0.0818049	HMX1.p2	BC057168|Nipal3|74552|NIPA-like domain containing 3	AK018640|Nipal3|74552|NIPA-like domain containing 3	AK138843|Nipal3|74552|NIPA-like domain containing 3	NM_028995|Nipal3|74552|NIPA-like domain containing 3	AK053937|Nipal3|74552|NIPA-like domain containing 3	AK082376|Nipal3|74552|NIPA-like domain containing 3	AK087811|Nipal3|74552|NIPA-like domain containing 3	AK148206|Nipal3|74552|NIPA-like domain containing 3	AK049696|Nipal3|74552|NIPA-like domain containing 3
mm9_v1_chr4_+_148859397_148859441	0.0812522	HMX1.p2	BC023174|Lzic|69151|leucine zipper and CTNNBIP1 domain containing	NM_026963|Lzic|69151|leucine zipper and CTNNBIP1 domain containing
mm9_v1_chr7_-_149558139_149558173	0.080964	HMX1.p2	BC049666|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK045822|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK163573|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	NM_177265|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene	AK031961|6330512M04Rik|320802|RIKEN cDNA 6330512M04 gene
mm9_v1_chr6_-_29129579_29129583	0.0803436	HMX1.p2	BC140954|Prrt4|101359|proline-rich transmembrane protein 4	AK052319|Prrt4|101359|proline-rich transmembrane protein 4	NM_001101443|Prrt4|101359|proline-rich transmembrane protein 4
mm9_v1_chr14_+_99499149_99499178	0.0799409	HMX1.p2	AK045133|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK030385|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC113804|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC129811|Pibf1|52023|progesterone immunomodulatory binding factor 1	BC129812|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK050974|Pibf1|52023|progesterone immunomodulatory binding factor 1	AK015781|Pibf1|52023|progesterone immunomodulatory binding factor 1
mm9_v1_chr18_-_38094995_38095137	0.0798067	HMX1.p2	AK140734|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK220466|Diap1|13367|diaphanous homolog 1 (Drosophila)	NM_007858|Diap1|13367|diaphanous homolog 1 (Drosophila)	U96963|Diap1|13367|diaphanous homolog 1 (Drosophila)	BC070412|Diap1|13367|diaphanous homolog 1 (Drosophila)	AK012707|Diap1|13367|diaphanous homolog 1 (Drosophila)
mm9_v1_chr11_+_85710266_85710349	0.0796108	HMX1.p2	NM_172798|Tbx4|21387|T-box 4	AK139949|Tbx4|21387|T-box 4	AK028407|Tbx4|21387|T-box 4	AK147984|Tbx4|21387|T-box 4
mm9_v1_chr12_+_34000269_34000282	0.0791675	HMX1.p2	AK036472|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr5_-_76792766_76792812	0.0790336	HMX1.p2	BC125545|Nmu|56183|neuromedin U	BC138071|Nmu|56183|neuromedin U	BC145135|Nmu|56183|neuromedin U	AF203444|Nmu|56183|neuromedin U	NM_019515|Nmu|56183|neuromedin U	AK077478|Nmu|56183|neuromedin U
mm9_v1_chr2_-_180511453_180511604	0.077933	HMX1.p2	AF454760|Bhlhe23|140489|basic helix-loop-helix family, member e23	BC119210|Bhlhe23|140489|basic helix-loop-helix family, member e23	BC119208|Bhlhe23|140489|basic helix-loop-helix family, member e23	AK044215|Bhlhe23|140489|basic helix-loop-helix family, member e23	AK051155|Bhlhe23|140489|basic helix-loop-helix family, member e23	NM_080641|Bhlhe23|140489|basic helix-loop-helix family, member e23
mm9_v1_chr17_-_13060997_13061008	0.077348	HMX1.p2	AK030261|Mas1|17171|MAS1 oncogene	AK015036|Mas1|17171|MAS1 oncogene	AK030265|Mas1|17171|MAS1 oncogene	NM_008552|Mas1|17171|MAS1 oncogene
mm9_v1_chr1_+_122237151_122237184	0.0771271	HMX1.p2	AK144471|C1ql2|226359|complement component 1, q subcomponent-like 2	BC040774|C1ql2|226359|complement component 1, q subcomponent-like 2	NM_207233|C1ql2|226359|complement component 1, q subcomponent-like 2
mm9_v1_chr12_-_86682028_86682042	0.0771264	HMX1.p2	
mm9_v1_chr11_+_120645606_120645625	0.0770788	HMX1.p2	BC103782|Gps1|209318|G protein pathway suppressor 1
mm9_v1_chr18_+_3383216_3383321	0.076213	HMX1.p2	AK004875|Cul2|71745|cullin 2	NM_029402|Cul2|71745|cullin 2	AK160597|Cul2|71745|cullin 2	AK220287|Cul2|71745|cullin 2	AK144693|Cul2|71745|cullin 2	AK028589|Cul2|71745|cullin 2	BC027428|Cul2|71745|cullin 2	BC026779|Cul2|71745|cullin 2
mm9_v1_chr11_+_69727693_69727762	0.0748789	HMX1.p2	BC011317|Gps2|56310|G protein pathway suppressor 2	NM_019726|Gps2|56310|G protein pathway suppressor 2	BC138880|Gps2|56310|G protein pathway suppressor 2	BC138879|Gps2|56310|G protein pathway suppressor 2
mm9_v1_chr7_+_128877968_128878020	0.0744207	HMX1.p2	BC021338|Scnn1g|20278|sodium channel, nonvoltage-gated 1 gamma	AF112187|Scnn1g|20278|sodium channel, nonvoltage-gated 1 gamma	NM_011326|Scnn1g|20278|sodium channel, nonvoltage-gated 1 gamma
mm9_v1_chr17_-_25933867_25933930	0.0742869	HMX1.p2	BC008695|Metrn|70083|meteorin, glial cell differentiation regulator	BC037181|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133462|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133463|Metrn|70083|meteorin, glial cell differentiation regulator	DQ133464|Metrn|70083|meteorin, glial cell differentiation regulator	AK007688|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr18_+_67365012_67365154	0.0741438	HMX1.p2	NM_024190|Chmp1b|67064|chromatin modifying protein 1B	AK151071|Chmp1b|67064|chromatin modifying protein 1B	AK014091|Chmp1b|67064|chromatin modifying protein 1B	AK012996|Chmp1b|67064|chromatin modifying protein 1B	AK167614|Chmp1b|67064|chromatin modifying protein 1B	BC002229|Chmp1b|67064|chromatin modifying protein 1B	BC034442|Chmp1b|67064|chromatin modifying protein 1B	CT010307|Chmp1b|67064|chromatin modifying protein 1B
mm9_v1_chr11_+_75300278_75300323	0.074066	HMX1.p2	NM_138659|Prpf8|192159|pre-mRNA processing factor 8	AK041017|Prpf8|192159|pre-mRNA processing factor 8
mm9_v1_chr5_-_147396814_147396814	0.0730319	HMX1.p2	AK140298|Gpr12|14738|G-protein coupled receptor 12	NM_001010941|Gpr12|14738|G-protein coupled receptor 12
mm9_v1_chr2_-_114001033_114001080	0.0729936	HMX1.p2	AK151716|Aqr|11834|aquarius	BC042479|Aqr|11834|aquarius	AK145547|Aqr|11834|aquarius	AK077886|Aqr|11834|aquarius	AK122310|Aqr|11834|aquarius	AK016322|Aqr|11834|aquarius	AK020468|Aqr|11834|aquarius	NM_009702|Aqr|11834|aquarius
mm9_v1_chr1_+_165978346_165978413	0.0720989	HMX1.p2	AK153623|Sele|20339|selectin, endothelial cell	M87862|Sele|20339|selectin, endothelial cell	NM_011345|Sele|20339|selectin, endothelial cell	BC119083|Sele|20339|selectin, endothelial cell	BC120795|Sele|20339|selectin, endothelial cell
mm9_v1_chr10_+_18127443_18127504	0.0719036	HMX1.p2	AK041760|Nhsl1|215819|NHS-like 1	AK017530|Nhsl1|215819|NHS-like 1	NM_173390|Nhsl1|215819|NHS-like 1	AK038892|Nhsl1|215819|NHS-like 1
mm9_v1_chr16_+_36071694_36071777	0.071889	HMX1.p2	AK144564|Ccdc58|381045|coiled-coil domain containing 58	NM_001159421|Ccdc58|381045|coiled-coil domain containing 58	NM_198645|Ccdc58|381045|coiled-coil domain containing 58	BC024862|Ccdc58|381045|coiled-coil domain containing 58
mm9_v1_chr7_+_4866810_4866885	0.0710619	HMX1.p2	AK155214|Zfp628|232816|zinc finger protein 628	NM_170759|Zfp628|232816|zinc finger protein 628	AK048291|Zfp628|232816|zinc finger protein 628	BC056945|Zfp628|232816|zinc finger protein 628	BC062973|Zfp628|232816|zinc finger protein 628
mm9_v1_chr9_+_75195564_75195697	0.0710441	HMX1.p2	AK136172|Bcl2l10|12049|Bcl2-like 10	NM_013479|Bcl2l10|12049|Bcl2-like 10	BC052690|Bcl2l10|12049|Bcl2-like 10	AF067660|Bcl2l10|12049|Bcl2-like 10	AF102501|Bcl2l10|12049|Bcl2-like 10	AK145385|Bcl2l10|12049|Bcl2-like 10	AK162127|Bcl2l10|12049|Bcl2-like 10
mm9_v1_chr1_-_30861874_30861889	0.0704726	HMX1.p2	AK086788|Phf3|213109|PHD finger protein 3
mm9_v1_chr6_-_85401198_85401297	0.0704671	HMX1.p2	BC115452|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	AK006658|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_001163427|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_028505|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene
mm9_v1_chrX_-_7151185_7151245	0.0704479	HMX1.p2	BC138137|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F	BC138138|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F	AF229644|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F	NM_138605|Ppp1r3f|54646|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm9_v1_chr16_-_35363927_35364003	0.0701055	HMX1.p2	AK037540|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK044615|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK007341|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK082516|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	NM_133704|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)
mm9_v1_chr7_+_13551155_13551193	0.069304	HMX1.p2	AK152107|Zfp324|243834|zinc finger protein 324	AK051488|Zfp324|243834|zinc finger protein 324	AK052251|Zfp324|243834|zinc finger protein 324	AK085053|Zfp324|243834|zinc finger protein 324
mm9_v1_chr13_-_3610328_3610353	0.0691007	HMX1.p2	AK171865|BC016423|105203|cDNA sequence BC016423	AK220437|BC016423|105203|cDNA sequence BC016423	AK138119|BC016423|105203|cDNA sequence BC016423	NM_134063|BC016423|105203|cDNA sequence BC016423
mm9_v1_chr14_+_65977510_65977519	0.0689203	HMX1.p2	AK155538|Zfp395|380912|zinc finger protein 395	NM_199029|Zfp395|380912|zinc finger protein 395
mm9_v1_chr7_-_138289796_138289827	0.0687323	HMX1.p2	BC115646|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	BC115647|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	NM_173409|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK016625|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK016371|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK029607|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene	AK161407|4933402N03Rik|233918|RIKEN cDNA 4933402N03 gene
mm9_v1_chr13_-_40829082_40829191	0.0681093	HMX1.p2	AB221578|Tcfap2a|21418|transcription factor AP-2, alpha	U17286|Tcfap2a|21418|transcription factor AP-2, alpha	AK145772|Tcfap2a|21418|transcription factor AP-2, alpha	X74216|Tcfap2a|21418|transcription factor AP-2, alpha	BC007471|Tcfap2a|21418|transcription factor AP-2, alpha	U17285|Tcfap2a|21418|transcription factor AP-2, alpha	NM_011547|Tcfap2a|21418|transcription factor AP-2, alpha
mm9_v1_chr14_-_34260308_34260313	0.0679242	HMX1.p2	BC053027|Mapk8|26419|mitogen-activated protein kinase 8
mm9_v1_chr4_+_116265582_116265626	0.0674657	HMX1.p2	BC002292|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr10_+_87429415_87429534	0.0672633	HMX1.p2	M30774|Tyms-ps|22172|thymidylate synthase, pseudogene
mm9_v1_chr11_+_59918557_59918675	0.0670965	HMX1.p2	AK154252|Rai1|19377|retinoic acid induced 1
mm9_v1_chr5_+_121311429_121311430	0.0670625	HMX1.p2	AK135899|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	AB067530|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	NM_001159934|Oas1h|246729|2'-5' oligoadenylate synthetase 1H	NM_145228|Oas1h|246729|2'-5' oligoadenylate synthetase 1H
mm9_v1_chr6_+_124959685_124959822	0.0666362	HMX1.p2	AK086185|Zfp384|269800|zinc finger protein 384	BC064013|Zfp384|269800|zinc finger protein 384	NM_175557|Zfp384|269800|zinc finger protein 384
mm9_v1_chr14_-_56830194_56830253	0.0664751	HMX1.p2	X12823|Gzmf|14943|granzyme F	BC145435|Gzmf|14943|granzyme F	BC100311|Gzmf|14943|granzyme F	NM_010374|Gzmf|14943|granzyme F	J03257|Gzmf|14943|granzyme F
mm9_v1_chr12_-_32635061_32635121	0.0659699	HMX1.p2	AK028949|Hbp1|73389|high mobility group box transcription factor 1	AK132503|Hbp1|73389|high mobility group box transcription factor 1	AK139211|Hbp1|73389|high mobility group box transcription factor 1	AK142187|Hbp1|73389|high mobility group box transcription factor 1	AK053005|Hbp1|73389|high mobility group box transcription factor 1	AK028674|Hbp1|73389|high mobility group box transcription factor 1	BC026853|Hbp1|73389|high mobility group box transcription factor 1
mm9_v1_chr7_+_98239427_98239516	0.0658478	HMX1.p2	AF388675|Dlg2|23859|discs, large homolog 2 (Drosophila)
mm9_v1_chr10_+_128242637_128242644	0.0658266	HMX1.p2	AK053314|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14	AK045345|Dnajc14|74330|DnaJ (Hsp40) homolog, subfamily C, member 14
mm9_v1_chr6_-_54942877_54942943	0.0649379	HMX1.p2	AK141474|Ggct|110175|gamma-glutamyl cyclotransferase	AK050049|Ggct|110175|gamma-glutamyl cyclotransferase
mm9_v1_chr7_+_13551210_13551218	0.0645584	HMX1.p2	BC053093|Zfp324|243834|zinc finger protein 324	NM_178732|Zfp324|243834|zinc finger protein 324	AK054407|Zfp324|243834|zinc finger protein 324	AK044240|Zfp324|243834|zinc finger protein 324	AK165922|Zfp324|243834|zinc finger protein 324
mm9_v1_chr9_-_20896441_20896453	0.0643157	HMX1.p2	AK039928|Raver1|71766|ribonucleoprotein, PTB-binding 1	AK051444|Raver1|71766|ribonucleoprotein, PTB-binding 1	AK084478|Raver1|71766|ribonucleoprotein, PTB-binding 1	AK138596|Raver1|71766|ribonucleoprotein, PTB-binding 1	AK168436|Raver1|71766|ribonucleoprotein, PTB-binding 1
mm9_v1_chr15_-_78299035_78299081	0.0642505	HMX1.p2	BC057674|Tmprss6|71753|transmembrane serine protease 6	AY240929|Tmprss6|71753|transmembrane serine protease 6	BC029645|Tmprss6|71753|transmembrane serine protease 6	NM_027902|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr6_-_38204008_38204008	0.0640645	HMX1.p2	NM_194061|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr2_+_130389461_130389507	0.0638619	HMX1.p2	AK169837|Mrps26|99045|mitochondrial ribosomal protein S26	AK131626|Mrps26|99045|mitochondrial ribosomal protein S26	BC048517|Mrps26|99045|mitochondrial ribosomal protein S26	NM_207207|Mrps26|99045|mitochondrial ribosomal protein S26
mm9_v1_chr6_-_125330478_125330540	0.0631327	HMX1.p2	BC026778|Plekhg6|213522|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	NM_198604|Plekhg6|213522|pleckstrin homology domain containing, family G (with RhoGef domain) member 6
mm9_v1_chr14_+_49065971_49066097	0.0628349	HMX1.p2	AK141246|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	NM_172600|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK032809|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK054494|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK040456|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK153648|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene	AK038175|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene
mm9_v1_chr16_-_32487964_32487964	0.0627297	HMX1.p2	AK052725|Osta|106407|organic solute transporter alpha	NM_145932|Osta|106407|organic solute transporter alpha
mm9_v1_chr2_-_5635228_5635384	0.0624163	HMX1.p2	AK052401|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141413|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141414|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr7_-_87468979_87469040	0.0622688	HMX1.p2	AK088662|Rccd1|269955|RCC1 domain containing 1	AK084219|Rccd1|269955|RCC1 domain containing 1
mm9_v1_chr18_-_20160536_20160597	0.0615495	HMX1.p2	BC144845|Dsc3|13507|desmocollin 3	NM_007882|Dsc3|13507|desmocollin 3	Y11169|Dsc3|13507|desmocollin 3
mm9_v1_chr14_-_17082321_17082321	0.0611504	HMX1.p2	AK083617|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	NM_027695|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial
mm9_v1_chr1_-_36615034_36615131	0.0609598	HMX1.p2	AK148298|Sema4c|20353|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm9_v1_chr9_-_61918412_61918412	0.0608318	HMX1.p2	BC094587|Glce|93683|glucuronyl C5-epimerase	NM_033320|Glce|93683|glucuronyl C5-epimerase
mm9_v1_chr5_+_130007103_130007146	0.0599268	HMX1.p2	NM_172276|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK140369|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK031872|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK088182|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK170748|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC057314|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC034336|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC034665|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC013466|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC036315|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)
mm9_v1_chr11_+_60745534_60745749	0.0598081	HMX1.p2	AK008141|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166255|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167442|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK011002|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK053378|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK150067|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK166507|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK167209|Map2k3|26397|mitogen-activated protein kinase kinase 3	NM_008928|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK159379|Map2k3|26397|mitogen-activated protein kinase kinase 3	BC007467|Map2k3|26397|mitogen-activated protein kinase kinase 3	D87115|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK168710|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK179609|Map2k3|26397|mitogen-activated protein kinase kinase 3	AK181928|Map2k3|26397|mitogen-activated protein kinase kinase 3
mm9_v1_chr1_-_75130450_75130463	0.0596311	HMX1.p2	BC117790|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	BC117791|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	BC094893|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	NM_194333|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3	U25739|Slc23a3|22626|solute carrier family 23 (nucleobase transporters), member 3
mm9_v1_chr3_-_53667683_53667736	0.0594998	HMX1.p2	BC051554|Ufm1|67890|ubiquitin-fold modifier 1	AK008280|Ufm1|67890|ubiquitin-fold modifier 1	AK007788|Ufm1|67890|ubiquitin-fold modifier 1	AK167321|Ufm1|67890|ubiquitin-fold modifier 1	AK148146|Ufm1|67890|ubiquitin-fold modifier 1	AK089948|Ufm1|67890|ubiquitin-fold modifier 1	AK167301|Ufm1|67890|ubiquitin-fold modifier 1	AK011737|Ufm1|67890|ubiquitin-fold modifier 1	AK166332|Ufm1|67890|ubiquitin-fold modifier 1	BC061065|Ufm1|67890|ubiquitin-fold modifier 1	NM_026435|Ufm1|67890|ubiquitin-fold modifier 1
mm9_v1_chr14_-_28321630_28321694	0.0583997	HMX1.p2	AK158666|Ccdc66|320234|coiled-coil domain containing 66	BC070471|Ccdc66|320234|coiled-coil domain containing 66	NM_177111|Ccdc66|320234|coiled-coil domain containing 66	AK145297|Ccdc66|320234|coiled-coil domain containing 66	AK170006|Ccdc66|320234|coiled-coil domain containing 66
mm9_v1_chr9_+_7628229_7628230	0.0582367	HMX1.p2	BC152335|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	BC152336|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	AF155933|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)	NM_013903|Mmp20|30800|matrix metallopeptidase 20 (enamelysin)
mm9_v1_chr7_-_64642165_64642240	0.058079	HMX1.p2	X59300|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	BC138962|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	BC138963|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	AK046263|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	NM_008074|Gabrg3|14407|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm9_v1_chr13_-_93124876_93124966	0.0576466	HMX1.p2	BC150759|Msh3|17686|mutS homolog 3 (E. coli)	AK078467|Msh3|17686|mutS homolog 3 (E. coli)	AK011426|Msh3|17686|mutS homolog 3 (E. coli)	AK133907|Msh3|17686|mutS homolog 3 (E. coli)	AK161089|Msh3|17686|mutS homolog 3 (E. coli)	AK040616|Msh3|17686|mutS homolog 3 (E. coli)	AK083388|Msh3|17686|mutS homolog 3 (E. coli)	M80360|Msh3|17686|mutS homolog 3 (E. coli)	NM_010829|Msh3|17686|mutS homolog 3 (E. coli)
mm9_v1_chr7_-_116637251_116637251	0.057066	HMX1.p2	AK147559|Trim66|330627|tripartite motif-containing 66	NM_001170913|Trim66|330627|tripartite motif-containing 66
mm9_v1_chr7_-_52560744_52560788	0.0570514	HMX1.p2	AK003969|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4
mm9_v1_chr6_+_47903388_47903510	0.0568087	HMX1.p2	AK133549|Zfp956|101197|zinc finger protein 956	NM_178898|Zfp956|101197|zinc finger protein 956	AK045736|Zfp956|101197|zinc finger protein 956	BC090657|Zfp956|101197|zinc finger protein 956	AK040541|Zfp956|101197|zinc finger protein 956	AK162106|Zfp956|101197|zinc finger protein 956	BC120581|Zfp956|101197|zinc finger protein 956	BC144752|Zfp956|101197|zinc finger protein 956	BC119280|Zfp956|101197|zinc finger protein 956
mm9_v1_chr3_-_37024751_37024880	0.0561359	HMX1.p2	U41504|Il2|16183|interleukin 2	DQ836354|Il2|16183|interleukin 2	U41494|Il2|16183|interleukin 2	U41505|Il2|16183|interleukin 2	U41506|Il2|16183|interleukin 2	AY147902|Il2|16183|interleukin 2	X66058|Il2|16183|interleukin 2	AF065914|Il2|16183|interleukin 2	AF065915|Il2|16183|interleukin 2	AF065916|Il2|16183|interleukin 2	BC116845|Il2|16183|interleukin 2	BC116873|Il2|16183|interleukin 2	X01772|Il2|16183|interleukin 2	X73040|Il2|16183|interleukin 2	K02292|Il2|16183|interleukin 2	NM_008366|Il2|16183|interleukin 2	AF538059|Il2|16183|interleukin 2	AF542383|Il2|16183|interleukin 2	AF542384|Il2|16183|interleukin 2	AF542385|Il2|16183|interleukin 2
mm9_v1_chr7_+_148021207_148021235	0.055806	HMX1.p2	BC051545|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr17_-_25934035_25934080	0.0550613	HMX1.p2	BC132177|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr10_-_78180902_78181043	0.0543955	HMX1.p2	AJ007750|Casp14|12365|caspase 14	BC101959|Casp14|12365|caspase 14	BC101960|Casp14|12365|caspase 14	BC103555|Casp14|12365|caspase 14	BC103556|Casp14|12365|caspase 14	AK081645|Casp14|12365|caspase 14	NM_009809|Casp14|12365|caspase 14
mm9_v1_chr6_-_43259527_43259552	0.0534926	HMX1.p2	AB221582|Nobox|18291|NOBOX oogenesis homeobox	BC125280|Nobox|18291|NOBOX oogenesis homeobox	BC125282|Nobox|18291|NOBOX oogenesis homeobox	AY061761|Nobox|18291|NOBOX oogenesis homeobox	NM_130869|Nobox|18291|NOBOX oogenesis homeobox
mm9_v1_chr19_+_6363898_6363960	0.0528716	HMX1.p2	AK133895|Sf1|22668|splicing factor 1	AK147081|Sf1|22668|splicing factor 1	AK154705|Sf1|22668|splicing factor 1	AK157845|Sf1|22668|splicing factor 1	AK152914|Sf1|22668|splicing factor 1	AK146151|Sf1|22668|splicing factor 1	X85802|Sf1|22668|splicing factor 1	BC055370|Sf1|22668|splicing factor 1	BC009091|Sf1|22668|splicing factor 1
mm9_v1_chr7_+_148021164_148021184	0.0525735	HMX1.p2	AK004470|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr16_+_43762333_43762354	0.0518125	HMX1.p2	BC119286|Drd3|13490|dopamine receptor D3	BC137819|Drd3|13490|dopamine receptor D3	NM_007877|Drd3|13490|dopamine receptor D3	X67274|Drd3|13490|dopamine receptor D3
mm9_v1_chr7_-_87469309_87469339	0.0510881	HMX1.p2	AK030872|Rccd1|269955|RCC1 domain containing 1	BC069844|Rccd1|269955|RCC1 domain containing 1	AK088482|Rccd1|269955|RCC1 domain containing 1	NM_173445|Rccd1|269955|RCC1 domain containing 1
mm9_v1_chr1_-_173957407_173957430	0.0509934	HMX1.p2	AK049613|Vangl2|93840|vang-like 2 (van gogh, Drosophila)	AK046036|Vangl2|93840|vang-like 2 (van gogh, Drosophila)
mm9_v1_chr12_+_33639071_33639140	0.0507434	HMX1.p2	AK049545|Sypl|19027|synaptophysin-like protein	AK049556|Sypl|19027|synaptophysin-like protein	AK030703|Sypl|19027|synaptophysin-like protein	AK159382|Sypl|19027|synaptophysin-like protein	AK159929|Sypl|19027|synaptophysin-like protein	AK033303|Sypl|19027|synaptophysin-like protein	AK167617|Sypl|19027|synaptophysin-like protein	AK052556|Sypl|19027|synaptophysin-like protein	AK154051|Sypl|19027|synaptophysin-like protein
mm9_v1_chr7_+_150293158_150293455	0.0504135	HMX1.p2	BC045142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	NM_008434|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AK154244|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	BC055304|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AY331142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	U70068|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AB079603|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1
mm9_v1_chr4_-_130037145_130037207	0.0495354	HMX1.p2	AJ272345|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK050342|Zcchc17|619605|zinc finger, CCHC domain containing 17	BC049231|Zcchc17|619605|zinc finger, CCHC domain containing 17	AY253297|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK161588|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK152289|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK168912|Zcchc17|619605|zinc finger, CCHC domain containing 17	NM_153160|Zcchc17|619605|zinc finger, CCHC domain containing 17	AK012953|Zcchc17|619605|zinc finger, CCHC domain containing 17
mm9_v1_chrX_+_149932693_149932774	0.0493705	HMX1.p2	AK076159|Ubqln2|54609|ubiquilin 2	AF177346|Ubqln2|54609|ubiquilin 2	BC053022|Ubqln2|54609|ubiquilin 2	NM_018798|Ubqln2|54609|ubiquilin 2
mm9_v1_chr1_-_64125352_64125397	0.0489021	HMX1.p2	AK086122|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK036514|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr4_+_153385839_153386102	0.0488413	HMX1.p2	BC138462|Lrrc47|72946|leucine rich repeat containing 47	BC138463|Lrrc47|72946|leucine rich repeat containing 47	AK154897|Lrrc47|72946|leucine rich repeat containing 47	NM_201226|Lrrc47|72946|leucine rich repeat containing 47	BC094573|Lrrc47|72946|leucine rich repeat containing 47	AK129306|Lrrc47|72946|leucine rich repeat containing 47
mm9_v1_chr11_-_99459418_99459419	0.0487469	HMX1.p2	AK009730|Krtap9-3|75586|keratin associated protein 9-3	AK131927|Krtap9-3|75586|keratin associated protein 9-3	NM_029351|Krtap9-3|75586|keratin associated protein 9-3
mm9_v1_chr11_-_17111582_17111598	0.048532	HMX1.p2	AK146152|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK168177|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	NM_025443|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)
mm9_v1_chr15_-_101543318_101543337	0.0485278	HMX1.p2	BC108361|Krt5|110308|keratin 5	BC006780|Krt5|110308|keratin 5	NM_027011|Krt5|110308|keratin 5
mm9_v1_chr5_+_66358362_66358362	0.0476456	HMX1.p2	AK010496|Chrna9|231252|cholinergic receptor, nicotinic, alpha polypeptide 9	NM_001081104|Chrna9|231252|cholinergic receptor, nicotinic, alpha polypeptide 9
mm9_v1_chr8_+_85872246_85872370	0.0466147	HMX1.p2	HM067443|4933434I20Rik|67555|RIKEN cDNA 4933434I20 gene	AK016272|4933434I20Rik|67555|RIKEN cDNA 4933434I20 gene	NM_026233|4933434I20Rik|67555|RIKEN cDNA 4933434I20 gene
mm9_v1_chr10_-_29255606_29255672	0.0462365	HMX1.p2	BC103794|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK076308|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK013366|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AB055811|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	AK133916|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)	NM_028351|Rspo3|72780|R-spondin 3 homolog (Xenopus laevis)
mm9_v1_chr2_+_74707394_74707441	0.0455495	HMX1.p2	AK207939|Mtx2|53375|metaxin 2	AK212612|Mtx2|53375|metaxin 2	AK216047|Mtx2|53375|metaxin 2
mm9_v1_chr5_+_35399461_35399583	0.0453499	HMX1.p2	AK170454|Dok7|231134|docking protein 7	BC089590|Dok7|231134|docking protein 7	AB220919|Dok7|231134|docking protein 7
mm9_v1_chr2_+_74536666_74536675	0.0453405	HMX1.p2	AK144746|Hoxd9|15438|homeobox D9
mm9_v1_chr5_-_54098762_54098942	0.0452694	HMX1.p2	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr1_+_122499031_122499257	0.0448335	HMX1.p2	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chr10_-_67011689_67011747	0.0439997	HMX1.p2	BC057106|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	BC058407|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	AK155334|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase	NM_001005419|Ado|211488|2-aminoethanethiol (cysteamine) dioxygenase
mm9_v1_chr7_-_31514445_31514522	0.0433406	HMX1.p2	AK008089|Tmem147|69804|transmembrane protein 147	AK007753|Tmem147|69804|transmembrane protein 147	BC147300|Tmem147|69804|transmembrane protein 147	BC147301|Tmem147|69804|transmembrane protein 147
mm9_v1_chr13_-_41174986_41175074	0.0423218	HMX1.p2	BC050009|Mak|17152|male germ cell-associated kinase	NM_001145802|Mak|17152|male germ cell-associated kinase	NM_001145803|Mak|17152|male germ cell-associated kinase
mm9_v1_chr9_-_70782614_70782614	0.0412069	HMX1.p2	BC021841|Lipc|15450|lipase, hepatic	NM_008280|Lipc|15450|lipase, hepatic
mm9_v1_chr19_-_5388655_5388722	0.040474	HMX1.p2	AB014721|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	AK088341|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	BC028823|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	BC051394|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	AF129931|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1	NM_016882|Sart1|20227|squamous cell carcinoma antigen recognized by T-cells 1
mm9_v1_chr7_-_134160864_134160869	0.0402639	HMX1.p2	BC003932|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene	NM_030240|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr5_-_110698874_110698881	0.0401442	HMX1.p2	AK049246|Pgam5|72542|phosphoglycerate mutase family member 5	AK169643|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr5_-_110698882_110698900	0.0393705	HMX1.p2	AK012159|Pgam5|72542|phosphoglycerate mutase family member 5	AK034588|Pgam5|72542|phosphoglycerate mutase family member 5	BC138924|Pgam5|72542|phosphoglycerate mutase family member 5	BC138925|Pgam5|72542|phosphoglycerate mutase family member 5	BC145467|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr7_+_13914668_13914694	0.0389687	HMX1.p2	AK136143|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AK162196|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AK136098|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	NM_001004762|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AK145339|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	AY694793|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	BC138548|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)	BC145767|Pla2g4c|232889|phospholipase A2, group IVC (cytosolic, calcium-independent)
mm9_v1_chr5_-_100158034_100158083	0.0383127	HMX1.p2	AK048739|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK086859|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK044414|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene	AK050558|A930011G23Rik|319818|RIKEN cDNA A930011G23 gene
mm9_v1_chr11_+_101115016_101115073	0.0379823	HMX1.p2	AK150822|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK082933|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK166008|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK145811|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK162230|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK003715|Vps25|28084|vacuolar protein sorting 25 (yeast)	BC029181|Vps25|28084|vacuolar protein sorting 25 (yeast)	NM_026776|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK002500|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK003877|Vps25|28084|vacuolar protein sorting 25 (yeast)	AK005149|Vps25|28084|vacuolar protein sorting 25 (yeast)
mm9_v1_chr7_-_112145415_112145415	0.0378643	HMX1.p2	NM_146760|Olfr672|258755|olfactory receptor 672
mm9_v1_chr4_+_151460980_151461016	0.0376555	HMX1.p2	AK154912|Plekhg5|269608|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm9_v1_chr9_-_30729990_30730036	0.0375112	HMX1.p2	BC094677|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15	NM_001024139|Adamts15|235130|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm9_v1_chr8_+_108214805_108214805	0.0369023	HMX1.p2	AK031012|Rltpr|234695|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing	NM_001033320|Rltpr|234695|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
mm9_v1_chr1_+_174242554_174242688	0.0367513	HMX1.p2	AF439263|Igsf8|140559|immunoglobulin superfamily, member 8	AF411055|Igsf8|140559|immunoglobulin superfamily, member 8	AK213338|Igsf8|140559|immunoglobulin superfamily, member 8
mm9_v1_chr9_+_44295329_44295421	0.0367174	HMX1.p2	AK155681|Bcl9l|80288|B-cell CLL/lymphoma 9-like
mm9_v1_chr7_-_117987867_117987920	0.0367001	HMX1.p2	BC096563|Rnf141|67150|ring finger protein 141	AK011839|Rnf141|67150|ring finger protein 141	BC018553|Rnf141|67150|ring finger protein 141	AK015505|Rnf141|67150|ring finger protein 141	NM_025999|Rnf141|67150|ring finger protein 141	AF353167|Rnf141|67150|ring finger protein 141	AK154417|Rnf141|67150|ring finger protein 141
mm9_v1_chr1_-_122161827_122161860	0.0360713	HMX1.p2	AK003108|Steap3|68428|STEAP family member 3	AK028961|Steap3|68428|STEAP family member 3	AY029586|Steap3|68428|STEAP family member 3	BC027251|Steap3|68428|STEAP family member 3	BC037435|Steap3|68428|STEAP family member 3	NM_133186|Steap3|68428|STEAP family member 3	AK171237|Steap3|68428|STEAP family member 3
mm9_v1_chr11_+_115773273_115773330	0.0360571	HMX1.p2	AK156823|1110017F19Rik|68528|RIKEN cDNA 1110017F19 gene	AK003745|1110017F19Rik|68528|RIKEN cDNA 1110017F19 gene	NM_001162998|1110017F19Rik|68528|RIKEN cDNA 1110017F19 gene
mm9_v1_chr8_+_86618736_86618846	0.0357815	HMX1.p2	
mm9_v1_chr4_-_123020045_123020155	0.0356473	HMX1.p2	M97017|Bmp8a|12163|bone morphogenetic protein 8a	NM_007558|Bmp8a|12163|bone morphogenetic protein 8a	AK157978|Bmp8a|12163|bone morphogenetic protein 8a
mm9_v1_chr17_-_32303796_32303836	0.0354201	HMX1.p2	NM_008716|Notch3|18131|Notch gene homolog 3 (Drosophila)	X74760|Notch3|18131|Notch gene homolog 3 (Drosophila)
mm9_v1_chr8_-_37676914_37676951	0.0343083	HMX1.p2	AK160715|Dlc1|50768|deleted in liver cancer 1	AF178078|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr11_+_68369687_68369687	0.0335323	HMX1.p2	BC024997|Mfsd6l|215723|major facilitator superfamily domain containing 6-like	NM_146004|Mfsd6l|215723|major facilitator superfamily domain containing 6-like
mm9_v1_chr9_-_119603442_119603477	0.0333742	HMX1.p2	AY538273|Scn10a|20264|sodium channel, voltage-gated, type X, alpha	NM_009134|Scn10a|20264|sodium channel, voltage-gated, type X, alpha	Y09108|Scn10a|20264|sodium channel, voltage-gated, type X, alpha
mm9_v1_chr8_-_74736717_74736735	0.0323843	HMX1.p2	BC120812|Cib3|234421|calcium and integrin binding family member 3	BC120814|Cib3|234421|calcium and integrin binding family member 3	AK050094|Cib3|234421|calcium and integrin binding family member 3	NM_001080812|Cib3|234421|calcium and integrin binding family member 3
mm9_v1_chr18_-_34166572_34166697	0.032346	HMX1.p2	BC007166|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	BC013557|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a	AK161182|Epb4.1l4a|13824|erythrocyte protein band 4.1-like 4a
mm9_v1_chr7_-_134027930_134028177	0.0317221	HMX1.p2	BC077714|Taok2|381921|TAO kinase 2	BC075676|Taok2|381921|TAO kinase 2
mm9_v1_chr7_-_134160552_134160577	0.0316289	HMX1.p2	AK082775|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr13_-_102453449_102453477	0.0309503	HMX1.p2	AK138868|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	AK049798|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr1_-_24594228_24594275	0.0304407	HMX1.p2	BC118970|Col19a1|12823|collagen, type XIX, alpha 1	AB000636|Col19a1|12823|collagen, type XIX, alpha 1	AK149136|Col19a1|12823|collagen, type XIX, alpha 1	NM_007733|Col19a1|12823|collagen, type XIX, alpha 1
mm9_v1_chr13_-_115880163_115880420	0.0299126	HMX1.p2	BC057160|Pelo|105083|pelota homolog (Drosophila)	BC050209|Pelo|105083|pelota homolog (Drosophila)	AK170635|Pelo|105083|pelota homolog (Drosophila)	NM_134058|Pelo|105083|pelota homolog (Drosophila)	AK146382|Pelo|105083|pelota homolog (Drosophila)	AK168228|Pelo|105083|pelota homolog (Drosophila)
mm9_v1_chr7_+_148021390_148021397	0.0297053	HMX1.p2	AK013117|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene	NM_029821|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr7_-_20188580_20188591	0.0295494	HMX1.p2	AB080582|Clasrp|53609|CLK4-associating serine/arginine rich protein	AB080583|Clasrp|53609|CLK4-associating serine/arginine rich protein
mm9_v1_chr10_+_19432392_19432408	0.0294222	HMX1.p2	AK054215|Il20ra|237313|interleukin 20 receptor, alpha	NM_172786|Il20ra|237313|interleukin 20 receptor, alpha	BC056628|Il20ra|237313|interleukin 20 receptor, alpha
mm9_v1_chr9_-_41932195_41932209	0.0290492	HMX1.p2	AB015790|Sorl1|20660|sortilin-related receptor, LDLR class A repeats-containing
mm9_v1_chr11_-_40568710_40568789	0.029006	HMX1.p2	AK167486|Ccng1|12450|cyclin G1	AK159429|Ccng1|12450|cyclin G1	AK153392|Ccng1|12450|cyclin G1	AK167052|Ccng1|12450|cyclin G1	AK159831|Ccng1|12450|cyclin G1	L49507|Ccng1|12450|cyclin G1	Z37110|Ccng1|12450|cyclin G1	AK160411|Ccng1|12450|cyclin G1	AK128957|Ccng1|12450|cyclin G1	AK147026|Ccng1|12450|cyclin G1	AK170397|Ccng1|12450|cyclin G1	AK143114|Ccng1|12450|cyclin G1	NM_009831|Ccng1|12450|cyclin G1
mm9_v1_chr19_-_60950373_60950471	0.028764	HMX1.p2	AK002448|Prdx3|11757|peroxiredoxin 3	BC005626|Prdx3|11757|peroxiredoxin 3	M28723|Prdx3|11757|peroxiredoxin 3	NM_007452|Prdx3|11757|peroxiredoxin 3
mm9_v1_chr4_-_88280078_88280089	0.0284768	HMX1.p2	BC053719|C87499|381590|expressed sequence C87499	AK135883|C87499|381590|expressed sequence C87499	AK163216|C87499|381590|expressed sequence C87499	NM_198663|C87499|381590|expressed sequence C87499
mm9_v1_chr18_-_44334726_44334726	0.0278374	HMX1.p2	AK020535|Spinkl|77424|serine protease inhibitor, Kazal type-like	NM_183123|Spinkl|77424|serine protease inhibitor, Kazal type-like
mm9_v1_chr8_+_90087751_90087812	0.0276563	HMX1.p2	AK132946|4933402J07Rik|330820|RIKEN cDNA 4933402J07 gene	AK077084|4933402J07Rik|330820|RIKEN cDNA 4933402J07 gene	NM_177901|4933402J07Rik|330820|RIKEN cDNA 4933402J07 gene	BC117078|4933402J07Rik|330820|RIKEN cDNA 4933402J07 gene	BC120779|4933402J07Rik|330820|RIKEN cDNA 4933402J07 gene
mm9_v1_chr11_+_116395281_116395465	0.0276268	HMX1.p2	AK136289|Sphk1|20698|sphingosine kinase 1	AK197304|Sphk1|20698|sphingosine kinase 1
mm9_v1_chr10_+_127335573_127335617	0.0272913	HMX1.p2	AK037184|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	BC064820|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	NM_027301|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7	AY044433|Sdr9c7|70061|4short chain dehydrogenase/reductase family 9C, member 7
mm9_v1_chr3_-_113332817_113333068	0.0271456	HMX1.p2	AK173272|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK179549|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK187884|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK084372|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK013288|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161974|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK163729|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK134241|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	BC043695|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161063|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_001038696|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_026043|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3
mm9_v1_chr5_+_44260035_44260114	0.026878	HMX1.p2	AK150412|Cd38|12494|CD38 antigen	AK153215|Cd38|12494|CD38 antigen	AK151016|Cd38|12494|CD38 antigen	NM_007646|Cd38|12494|CD38 antigen	AK040498|Cd38|12494|CD38 antigen	AK038439|Cd38|12494|CD38 antigen	BC046312|Cd38|12494|CD38 antigen	AK042970|Cd38|12494|CD38 antigen	AK043442|Cd38|12494|CD38 antigen	AK151918|Cd38|12494|CD38 antigen	AK153334|Cd38|12494|CD38 antigen	L11332|Cd38|12494|CD38 antigen	CT010386|Cd38|12494|CD38 antigen
mm9_v1_chr5_-_124778459_124778459	0.0263107	HMX1.p2	NM_001081323|Mphosph9|269702|M-phase phosphoprotein 9
mm9_v1_chr1_+_74283325_74283370	0.0257687	HMX1.p2	BC115750|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr4_-_118890772_118890821	0.0254548	HMX1.p2	BC048569|4930538K18Rik|75180|RIKEN cDNA 4930538K18 gene	AK015991|4930538K18Rik|75180|RIKEN cDNA 4930538K18 gene	AK053970|4930538K18Rik|75180|RIKEN cDNA 4930538K18 gene	NM_029198|4930538K18Rik|75180|RIKEN cDNA 4930538K18 gene
mm9_v1_chr12_-_103213890_103213953	0.0238319	HMX1.p2	AK156663|Gm2701|100040305|predicted gene 2701
mm9_v1_chr1_+_172163001_172163001	0.0236132	HMX1.p2	DQ131181|Sh2d1b2|545378|SH2 domain protein 1B2	DQ140178|Sh2d1b2|545378|SH2 domain protein 1B2	NM_001033499|Sh2d1b2|545378|SH2 domain protein 1B2
mm9_v1_chr2_+_32307683_32307754	0.023299	HMX1.p2	BC057613|Naif1|71254|nuclear apoptosis inducing factor 1
mm9_v1_chr12_+_114782118_114782165	0.0228492	HMX1.p2	AY158689|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	NM_174885|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC139059|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC108387|Adam6a|238406|a disintegrin and metallopeptidase domain 6A
mm9_v1_chr12_+_36652206_36652279	0.0222937	HMX1.p2	BC023499|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)	NM_207531|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)	AK053177|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)
mm9_v1_chr12_+_78339999_78340029	0.0222091	HMX1.p2	AK048520|Fut8|53618|fucosyltransferase 8	NM_016893|Fut8|53618|fucosyltransferase 8	AK163494|Fut8|53618|fucosyltransferase 8
mm9_v1_chr4_-_147874557_147874570	0.0219838	HMX1.p2	BC023373|Angptl7|654812|angiopoietin-like 7	AK031675|Angptl7|654812|angiopoietin-like 7	NM_001039554|Angptl7|654812|angiopoietin-like 7
mm9_v1_chr1_-_74552346_74552441	0.0216757	HMX1.p2	BC114208|Usp37|319651|ubiquitin specific peptidase 37	AK035640|Usp37|319651|ubiquitin specific peptidase 37
mm9_v1_chr17_+_35689072_35689090	0.0212421	HMX1.p2	NM_001008424|Cdsn|386463|corneodesmosin	BC055373|Cdsn|386463|corneodesmosin
mm9_v1_chr7_+_148068262_148068416	0.0206717	HMX1.p2	AK075936|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	NM_011875|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK081160|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK163017|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK051078|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK167169|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK171504|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139184|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC139187|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK145654|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AF107838|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	BC029989|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	AK206994|Psmd13|23997|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm9_v1_chr12_+_34613289_34613297	0.0182529	HMX1.p2	AF517121|Ferd3l|114712|Fer3-like (Drosophila)	NM_033522|Ferd3l|114712|Fer3-like (Drosophila)	BC111576|Ferd3l|114712|Fer3-like (Drosophila)
mm9_v1_chr4_-_136438225_136438228	0.0180236	HMX1.p2	X16874|C1qb|12260|complement component 1, q subcomponent, beta polypeptide
mm9_v1_chr1_+_138362933_138362977	0.0178498	HMX1.p2	AK087451|Kif14|381293|kinesin family member 14
mm9_v1_chr11_-_6538639_6538651	0.017296	HMX1.p2	V00856|Wap|22373|whey acidic protein	BC132280|Wap|22373|whey acidic protein	BC132282|Wap|22373|whey acidic protein	AK142655|Wap|22373|whey acidic protein	AK164735|Wap|22373|whey acidic protein	NM_011709|Wap|22373|whey acidic protein
mm9_v1_chr16_-_36874886_36874911	0.0169637	HMX1.p2	BC056626|Eaf2|106389|ELL associated factor 2	NM_134111|Eaf2|106389|ELL associated factor 2
mm9_v1_chr13_+_56711111_56711127	0.0168991	HMX1.p2	AK171557|Tgfbi|21810|transforming growth factor, beta induced
mm9_v1_chr6_+_85401450_85401503	0.0158632	HMX1.p2	NM_007638|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)
mm9_v1_chr12_+_77425836_77425924	0.0157943	HMX1.p2	AK139319|Akap5|238276|A kinase (PRKA) anchor protein 5	NM_001101471|Akap5|238276|A kinase (PRKA) anchor protein 5
mm9_v1_chr17_-_57199014_57199114	0.0155578	HMX1.p2	AK206310|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23	AK158821|Slc25a23|66972|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
mm9_v1_chr7_+_117265568_117265624	0.0151351	HMX1.p2	NM_009516|Wee1|22390|WEE 1 homolog 1 (S. pombe)	BC006852|Wee1|22390|WEE 1 homolog 1 (S. pombe)	D30743|Wee1|22390|WEE 1 homolog 1 (S. pombe)
mm9_v1_chr2_-_32639934_32639947	0.0151082	HMX1.p2	AK006127|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene
mm9_v1_chr4_+_145260599_145260599	0.014742	HMX1.p2	BC096593|Gm13242|100041379|predicted gene 13242	NM_001103158|Gm13242|100041379|predicted gene 13242
mm9_v1_chr1_-_173152548_173152594	0.0138548	HMX1.p2	AK012264|Tomm40l|641376|translocase of outer mitochondrial membrane 40 homolog-like (yeast)
mm9_v1_chr4_-_40883509_40883654	0.0136756	HMX1.p2	AK184952|Bag1|12017|BCL2-associated athanogene 1	AK213721|Bag1|12017|BCL2-associated athanogene 1	AK216811|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr10_-_120851345_120851478	0.0133398	HMX1.p2	AK196922|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3
mm9_v1_chr11_+_102466556_102466714	0.0129716	HMX1.p2	AF139183|Fzd2|57265|frizzled homolog 2 (Drosophila)	AF206322|Fzd2|57265|frizzled homolog 2 (Drosophila)
mm9_v1_chr3_-_33042147_33042183	0.0129173	HMX1.p2	AK044552|Pex5l|58869|peroxisomal biogenesis factor 5-like
mm9_v1_chr14_+_21748646_21748736	0.0125736	HMX1.p2	BC008520|Vcl|22330|vinculin	NM_009502|Vcl|22330|vinculin	L18880|Vcl|22330|vinculin
mm9_v1_chr5_-_121641282_121641449	0.0124368	HMX1.p2	D84372|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC057398|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC028513|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK011468|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK147354|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	BC059278|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159501|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	AK159587|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_001109992|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11	NM_011202|Ptpn11|19247|protein tyrosine phosphatase, non-receptor type 11
mm9_v1_chr15_-_97835044_97835154	0.0124274	HMX1.p2	BC052326|Col2a1|12824|collagen, type II, alpha 1	BC051383|Col2a1|12824|collagen, type II, alpha 1	AK132311|Col2a1|12824|collagen, type II, alpha 1	BC082331|Col2a1|12824|collagen, type II, alpha 1	AK053784|Col2a1|12824|collagen, type II, alpha 1	NM_001113515|Col2a1|12824|collagen, type II, alpha 1	NM_031163|Col2a1|12824|collagen, type II, alpha 1
mm9_v1_chr9_-_96264765_96264786	0.0121674	HMX1.p2	AK148495|Atp1b3|11933|ATPase, Na+/K+ transporting, beta 3 polypeptide
mm9_v1_chr14_-_65671577_65671651	0.0118617	HMX1.p2	BC038525|Extl3|54616|exostoses (multiple)-like 3
mm9_v1_chr11_-_115228986_115229036	0.0116617	HMX1.p2	AK044395|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	AB087506|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	AK049861|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	BC024617|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene	NM_175454|C630004H02Rik|217310|RIKEN cDNA C630004H02 gene
mm9_v1_chr2_+_140221165_140221195	0.0116521	HMX1.p2	AK134694|Macrod2|72899|MACRO domain containing 2	NM_001013802|Macrod2|72899|MACRO domain containing 2	AK013491|Macrod2|72899|MACRO domain containing 2	NM_028387|Macrod2|72899|MACRO domain containing 2	AK011824|Macrod2|72899|MACRO domain containing 2	AK165589|Macrod2|72899|MACRO domain containing 2	AK029184|Macrod2|72899|MACRO domain containing 2	AK160433|Macrod2|72899|MACRO domain containing 2	AK004072|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr16_+_78931369_78931521	0.0116381	HMX1.p2	AF311699|Chodl|246048|chondrolectin	AK014255|Chodl|246048|chondrolectin	BC117071|Chodl|246048|chondrolectin	BC117073|Chodl|246048|chondrolectin	BC144738|Chodl|246048|chondrolectin
mm9_v1_chr11_+_116455000_116455029	0.0114042	HMX1.p2	AF004108|Aanat|11298|arylalkylamine N-acetyltransferase	AF004110|Aanat|11298|arylalkylamine N-acetyltransferase	NM_009591|Aanat|11298|arylalkylamine N-acetyltransferase	BC116967|Aanat|11298|arylalkylamine N-acetyltransferase	BC119139|Aanat|11298|arylalkylamine N-acetyltransferase
mm9_v1_chr15_+_33012913_33012952	0.00970898	HMX1.p2	AF107835|Pgcp|54381|plasma glutamate carboxypeptidase	AK011656|Pgcp|54381|plasma glutamate carboxypeptidase	AK075686|Pgcp|54381|plasma glutamate carboxypeptidase
mm9_v1_chr5_-_26431853_26431853	0.00782091	HMX1.p2	AK077239|5031410I06Rik|381622|RIKEN cDNA 5031410I06 gene	NM_207657|5031410I06Rik|381622|RIKEN cDNA 5031410I06 gene
mm9_v1_chr9_+_106402297_106402322	0.00773784	HMX1.p2	NM_001146701|Iqcf1|74267|IQ motif containing F1	NM_028843|Iqcf1|74267|IQ motif containing F1	BC049769|Iqcf1|74267|IQ motif containing F1	AK006797|Iqcf1|74267|IQ motif containing F1
mm9_v1_chr9_+_74899844_74899963	0.00705061	HMX1.p2	AK078740|Arpp19|59046|cAMP-regulated phosphoprotein 19
mm9_v1_chr2_-_130867226_130867250	0.00693868	HMX1.p2	AB041809|Gfra4|14588|glial cell line derived neurotrophic factor family receptor alpha 4
mm9_v1_chr3_+_88981440_88981554	0.0064988	HMX1.p2	AK170115|Scamp3|24045|secretory carrier membrane protein 3	AF005036|Scamp3|24045|secretory carrier membrane protein 3	AF295403|Scamp3|24045|secretory carrier membrane protein 3
mm9_v1_chr6_-_120443824_120443824	0.00647943	HMX1.p2	AF277399|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)	BC137862|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)	NM_033567|Cecr6|94047|cat eye syndrome chromosome region, candidate 6 homolog (human)
mm9_v1_chr9_-_20896432_20896440	0.00636244	HMX1.p2	AK079191|Raver1|71766|ribonucleoprotein, PTB-binding 1
mm9_v1_chr5_+_3803163_3803177	0.006246	HMX1.p2	NM_001170552|Krit1|79264|KRIT1, ankyrin repeat containing	NM_030675|Krit1|79264|KRIT1, ankyrin repeat containing
mm9_v1_chr12_+_3426820_3426856	0.00480604	HMX1.p2	AK148015|Asxl2|75302|additional sex combs like 2 (Drosophila)
mm9_v1_chrX_+_19636666_19636695	0.00470551	HMX1.p2	AK011202|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7	AB040710|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7	AB046929|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7	NM_021715|Chst7|60322|carbohydrate (N-acetylglucosamino) sulfotransferase 7
mm9_v1_chr5_+_92566909_92567009	0.00465785	HMX1.p2	AK166587|Uso1|56041|USO1 homolog, vesicle docking protein (yeast)	BC016069|Uso1|56041|USO1 homolog, vesicle docking protein (yeast)	NM_019490|Uso1|56041|USO1 homolog, vesicle docking protein (yeast)	AK156070|Uso1|56041|USO1 homolog, vesicle docking protein (yeast)	AK144638|Uso1|56041|USO1 homolog, vesicle docking protein (yeast)	AK172425|Uso1|56041|USO1 homolog, vesicle docking protein (yeast)	AK168433|Uso1|56041|USO1 homolog, vesicle docking protein (yeast)
mm9_v1_chr6_+_113408477_113408477	0.00445764	HMX1.p2	AK046302|Il17re|57890|interleukin 17 receptor E	NM_145826|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr16_-_10788722_10788752	0.00432685	HMX1.p2	J03494|Tnp2|21959|transition protein 2	BC092529|Tnp2|21959|transition protein 2	NM_013694|Tnp2|21959|transition protein 2	AK005689|Tnp2|21959|transition protein 2
mm9_v1_chr9_+_121669121_121669172	0.00380006	HMX1.p2	NM_001166644|Zfp651|270210|zinc finger protein 651
mm9_v1_chr1_-_155033576_155033576	0.00185215	HMX1.p2	AK147105|Lamc2|16782|laminin, gamma 2	NM_008485|Lamc2|16782|laminin, gamma 2
mm9_v1_chr8_-_44712538_44712623	0.00111698	HMX1.p2	NM_001025240|Gm5346|384813|predicted gene 5346	BC151154|Gm5346|384813|predicted gene 5346	BC157897|Gm5346|384813|predicted gene 5346
mm9_v1_chr6_+_85401961_85402121	0.00106458	HMX1.p2	AK168087|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK150160|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK169426|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK012201|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167367|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK166888|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK146902|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167938|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK167827|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK168272|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK077781|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	BC008255|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK184902|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK198665|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)	AK203942|Cct7|12468|chaperonin containing Tcp1, subunit 7 (eta)
mm9_v1_chr2_-_130867149_130867194	0.000583547	HMX1.p2	AK090192|Gfra4|14588|glial cell line derived neurotrophic factor family receptor alpha 4
mm9_v1_chrX_+_45976982_45977308	0.000182974	HMX1.p2	NM_001166450|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	BC048692|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155812|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF155813|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr8_-_114516147_114516201	0.000153754	HMX1.p2	BC019976|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK039699|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK161044|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK035614|Adat1|30947|adenosine deaminase, tRNA-specific 1	AK082399|Adat1|30947|adenosine deaminase, tRNA-specific 1	NM_013925|Adat1|30947|adenosine deaminase, tRNA-specific 1
