mm9_v1_chr16_+_23146608_23146621	66.7725	HNF4A_NR2F1,2.p2	AK134112|Adipoq|11450|adiponectin, C1Q and collagen domain containing	NM_009605|Adipoq|11450|adiponectin, C1Q and collagen domain containing
mm9_v1_chr16_+_23146631_23146693	65.6614	HNF4A_NR2F1,2.p2	AK041214|Adipoq|11450|adiponectin, C1Q and collagen domain containing	AX767957|Adipoq|11450|adiponectin, C1Q and collagen domain containing	U37222|Adipoq|11450|adiponectin, C1Q and collagen domain containing	AK003138|Adipoq|11450|adiponectin, C1Q and collagen domain containing	BC028770|Adipoq|11450|adiponectin, C1Q and collagen domain containing
mm9_v1_chr16_+_5007426_5007437	62.3764	HNF4A_NR2F1,2.p2	BC047216|Gm5480|432995|predicted gene 5480
mm9_v1_chr2_+_172978566_172978589	58.9441	HNF4A_NR2F1,2.p2	AK028046|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK080261|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK133496|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK149525|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	NM_011044|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	AK030327|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	BC028342|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic	BC037629|Pck1|18534|phosphoenolpyruvate carboxykinase 1, cytosolic
mm9_v1_chr3_+_122598292_122598309	52.638	HNF4A_NR2F1,2.p2	AK007995|Fabp2|14079|fatty acid binding protein 2, intestinal	M65034|Fabp2|14079|fatty acid binding protein 2, intestinal	AY523818|Fabp2|14079|fatty acid binding protein 2, intestinal	AY523819|Fabp2|14079|fatty acid binding protein 2, intestinal	BC013457|Fabp2|14079|fatty acid binding protein 2, intestinal	NM_007980|Fabp2|14079|fatty acid binding protein 2, intestinal
mm9_v1_chr14_-_56377206_56377214	49.8523	HNF4A_NR2F1,2.p2	BC012664|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr14_-_56377231_56377254	49.7959	HNF4A_NR2F1,2.p2	AF041377|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B	BC046340|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr14_-_56377278_56377296	49.4577	HNF4A_NR2F1,2.p2	AK003968|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr14_-_56377260_56377270	49.111	HNF4A_NR2F1,2.p2	NM_009894|Cideb|12684|cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
mm9_v1_chr11_-_73137838_73138062	44.5093	HNF4A_NR2F1,2.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chr17_-_43639675_43639721	43.3559	HNF4A_NR2F1,2.p2	AK143906|Mep1a|17287|meprin 1 alpha	AK164734|Mep1a|17287|meprin 1 alpha	AK093914|Mep1a|17287|meprin 1 alpha	M74897|Mep1a|17287|meprin 1 alpha	BC015258|Mep1a|17287|meprin 1 alpha	NM_008585|Mep1a|17287|meprin 1 alpha
mm9_v1_chr9_+_46036703_46036712	42.9832	HNF4A_NR2F1,2.p2	NM_009692|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr18_+_21230844_21230846	40.793	HNF4A_NR2F1,2.p2	AK098127|Mep1b|17288|meprin 1 beta	L15193|Mep1b|17288|meprin 1 beta	NM_008586|Mep1b|17288|meprin 1 beta	BC145979|Mep1b|17288|meprin 1 beta	BC125627|Mep1b|17288|meprin 1 beta
mm9_v1_chr11_-_77707282_77707373	39.0191	HNF4A_NR2F1,2.p2	U94700|Pipox|19193|pipecolic acid oxidase	BC013525|Pipox|19193|pipecolic acid oxidase	AK135009|Pipox|19193|pipecolic acid oxidase	AK149488|Pipox|19193|pipecolic acid oxidase	AK008555|Pipox|19193|pipecolic acid oxidase	NM_008952|Pipox|19193|pipecolic acid oxidase
mm9_v1_chr12_+_37968225_37968446	38.9677	HNF4A_NR2F1,2.p2	AK040702|Tmem195|319660|transmembrane protein 195	NM_178767|Tmem195|319660|transmembrane protein 195	BC038044|Tmem195|319660|transmembrane protein 195	AK050246|Tmem195|319660|transmembrane protein 195	AK163155|Tmem195|319660|transmembrane protein 195
mm9_v1_chr9_+_46036788_46036792	38.5625	HNF4A_NR2F1,2.p2	AK076187|Apoa1|11806|apolipoprotein A-I	AK131864|Apoa1|11806|apolipoprotein A-I	AK149576|Apoa1|11806|apolipoprotein A-I	AK161536|Apoa1|11806|apolipoprotein A-I	X64262|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr4_-_129851289_129851317	37.4989	HNF4A_NR2F1,2.p2	CT010275|Tinagl1|94242|tubulointerstitial nephritis antigen-like 1
mm9_v1_chr9_+_46036799_46036808	36.5277	HNF4A_NR2F1,2.p2	L04151|Apoa1|11806|apolipoprotein A-I	BC091745|Apoa1|11806|apolipoprotein A-I	BC019837|Apoa1|11806|apolipoprotein A-I	BC012253|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr1_+_74455956_74455992	35.8253	HNF4A_NR2F1,2.p2	NM_009509|Vil1|22349|villin 1	AK027908|Vil1|22349|villin 1	M98454|Vil1|22349|villin 1	BC015267|Vil1|22349|villin 1	BC145671|Vil1|22349|villin 1	BC117875|Vil1|22349|villin 1
mm9_v1_chr7_+_150659707_150659725	34.8714	HNF4A_NR2F1,2.p2	BC003734|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18
mm9_v1_chr7_+_150659625_150659701	33.9584	HNF4A_NR2F1,2.p2	AJ404609|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	NM_008767|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	BC015078|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	AF037065|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	AF028739|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18
mm9_v1_chr15_+_82282806_82282831	33.0879	HNF4A_NR2F1,2.p2	AK143963|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	NM_010006|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	BC094015|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	M23998|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	BC010593|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9	M27168|Cyp2d9|13105|cytochrome P450, family 2, subfamily d, polypeptide 9
mm9_v1_chr6_+_71149869_71149892	32.9488	HNF4A_NR2F1,2.p2	AK131868|Fabp1|14080|fatty acid binding protein 1, liver	NM_017399|Fabp1|14080|fatty acid binding protein 1, liver	Y14660|Fabp1|14080|fatty acid binding protein 1, liver	BC009812|Fabp1|14080|fatty acid binding protein 1, liver
mm9_v1_chr4_-_61179982_61180020	31.6763	HNF4A_NR2F1,2.p2	X04115|Mup1|17840|major urinary protein 1
mm9_v1_chr9_-_15105965_15105999	31.6197	HNF4A_NR2F1,2.p2	BC016078|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	NM_133732|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chrX_+_136343083_136343199	31.1563	HNF4A_NR2F1,2.p2	AK004990|Cldn2|12738|claudin 2	BC015252|Cldn2|12738|claudin 2	AF072128|Cldn2|12738|claudin 2
mm9_v1_chr3_+_94736993_94737043	30.9923	HNF4A_NR2F1,2.p2	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr10_-_88969371_88969402	30.9799	HNF4A_NR2F1,2.p2	U09416|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	BC015261|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK050566|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK002513|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK132255|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_001163700|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_009108|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4
mm9_v1_chr19_+_23239333_23239507	30.7736	HNF4A_NR2F1,2.p2	AK177679|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr1_+_162917586_162917638	30.7527	HNF4A_NR2F1,2.p2	BC033377|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	AK050295|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm9_v1_chr4_-_60235470_60235470	30.5106	HNF4A_NR2F1,2.p2	NM_001134676|Mup8|100041687|major urinary protein 8
mm9_v1_chr17_-_34999458_34999467	30.1509	HNF4A_NR2F1,2.p2	NM_001142706|Cfb|14962|complement factor B	NM_008198|Cfb|14962|complement factor B
mm9_v1_chr1_+_162917640_162917674	30.1005	HNF4A_NR2F1,2.p2	BC011165|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	S47225|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm9_v1_chr3_+_107680147_107680162	30.001	HNF4A_NR2F1,2.p2	NM_133867|Eps8l3|99662|EPS8-like 3	AK136584|Eps8l3|99662|EPS8-like 3	AY074932|Eps8l3|99662|EPS8-like 3	BC014734|Eps8l3|99662|EPS8-like 3	AK167630|Eps8l3|99662|EPS8-like 3
mm9_v1_chr3_+_94736974_94736989	29.6646	HNF4A_NR2F1,2.p2	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr9_-_15105864_15105946	29.5827	HNF4A_NR2F1,2.p2	CT010296|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC011540|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene	BC025213|4931406C07Rik|70984|RIKEN cDNA 4931406C07 gene
mm9_v1_chr10_-_128397928_128398043	28.7945	HNF4A_NR2F1,2.p2	BC024898|Mettl7b|71664|methyltransferase like 7B	AK002239|Mettl7b|71664|methyltransferase like 7B	NM_027853|Mettl7b|71664|methyltransferase like 7B
mm9_v1_chr17_+_24879324_24879377	28.4797	HNF4A_NR2F1,2.p2	AK007404|Sepx1|27361|selenoprotein X 1
mm9_v1_chr11_-_73138102_73138139	28.4331	HNF4A_NR2F1,2.p2	BC024934|Aspa|11484|aspartoacylase	AK002859|Aspa|11484|aspartoacylase	AK008354|Aspa|11484|aspartoacylase	NM_023113|Aspa|11484|aspartoacylase
mm9_v1_chr8_+_107450138_107450197	27.8013	HNF4A_NR2F1,2.p2	NM_001163756|Ces2e|234673|carboxylesterase 2E	NM_172759|Ces2e|234673|carboxylesterase 2E	AK077248|Ces2e|234673|carboxylesterase 2E	BC055062|Ces2e|234673|carboxylesterase 2E	AK033563|Ces2e|234673|carboxylesterase 2E
mm9_v1_chr7_-_106844083_106844095	27.722	HNF4A_NR2F1,2.p2	BC037089|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1	BC049251|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1	BC019209|Slco2b1|101488|solute carrier organic anion transporter family, member 2b1
mm9_v1_chr17_-_34999068_34999191	27.6245	HNF4A_NR2F1,2.p2	AK149531|Cfb|14962|complement factor B	BC005451|Cfb|14962|complement factor B	AK098094|Cfb|14962|complement factor B	AK149573|Cfb|14962|complement factor B	M57890|Cfb|14962|complement factor B	AK151246|Cfb|14962|complement factor B
mm9_v1_chr7_-_31840647_31840711	27.5685	HNF4A_NR2F1,2.p2	AK002585|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_019503|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_052992|Fxyd1|56188|FXYD domain-containing ion transport regulator 1
mm9_v1_chr11_+_32183671_32183700	27.4111	HNF4A_NR2F1,2.p2	AK002222|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010937|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011025|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011055|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_008218|Hba-a1|15122|hemoglobin alpha, adult chain 1	L75940|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK003077|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK005434|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010422|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010923|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010927|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010933|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010938|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010987|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011018|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011023|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011028|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011030|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011073|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011076|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011121|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012329|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK012348|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012755|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK019138|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK028173|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK076068|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK171893|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_001083955|Hba-a2|110257|hemoglobin alpha, adult chain 2	M10466|Hba-a2|110257|hemoglobin alpha, adult chain 2	BC043020|Hba-a1|15122|hemoglobin alpha, adult chain 1	M26895|Hba-a2|110257|hemoglobin alpha, adult chain 2
mm9_v1_chr15_+_3220766_3220979	27.2321	HNF4A_NR2F1,2.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr11_+_32196488_32196517	27.1413	HNF4A_NR2F1,2.p2	AK002222|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010937|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011025|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011055|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_008218|Hba-a1|15122|hemoglobin alpha, adult chain 1	L75940|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK003077|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK005434|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010422|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010923|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010927|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010933|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010938|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010987|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011018|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011023|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011028|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011030|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011073|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011076|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011121|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012329|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK012348|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012755|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK019138|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK028173|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK076068|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK171893|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_001083955|Hba-a2|110257|hemoglobin alpha, adult chain 2	M10466|Hba-a2|110257|hemoglobin alpha, adult chain 2	BC043020|Hba-a1|15122|hemoglobin alpha, adult chain 1	M26895|Hba-a2|110257|hemoglobin alpha, adult chain 2
mm9_v1_chr15_+_3220999_3221005	27.0018	HNF4A_NR2F1,2.p2	AK168463|Sepp1|20363|selenoprotein P, plasma, 1	BC001991|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr11_+_58192533_58192558	26.9683	HNF4A_NR2F1,2.p2	NM_001083884|2210415F13Rik|70163|RIKEN cDNA 2210415F13 gene	NM_027339|2210415F13Rik|70163|RIKEN cDNA 2210415F13 gene	AK136583|2210415F13Rik|70163|RIKEN cDNA 2210415F13 gene	AK008940|2210415F13Rik|70163|RIKEN cDNA 2210415F13 gene	BC026828|2210415F13Rik|70163|RIKEN cDNA 2210415F13 gene
mm9_v1_chr15_-_3421486_3421486	26.3404	HNF4A_NR2F1,2.p2	M31680|Ghr|14600|growth hormone receptor	M33324|Ghr|14600|growth hormone receptor	NM_001048147|Ghr|14600|growth hormone receptor
mm9_v1_chr3_+_94497485_94497530	26.2799	HNF4A_NR2F1,2.p2	NM_019414|Selenbp2|20342|selenium binding protein 2	S56599|Selenbp2|20342|selenium binding protein 2	BC024106|Selenbp2|20342|selenium binding protein 2
mm9_v1_chr13_-_41923709_41923740	25.624	HNF4A_NR2F1,2.p2	BC027755|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene
mm9_v1_chr15_+_3220994_3220998	25.5422	HNF4A_NR2F1,2.p2	AK002450|Sepp1|20363|selenoprotein P, plasma, 1	AK077265|Sepp1|20363|selenoprotein P, plasma, 1	AK146774|Sepp1|20363|selenoprotein P, plasma, 1	AK148623|Sepp1|20363|selenoprotein P, plasma, 1	AK159269|Sepp1|20363|selenoprotein P, plasma, 1	AK159524|Sepp1|20363|selenoprotein P, plasma, 1	AK159911|Sepp1|20363|selenoprotein P, plasma, 1	AK159935|Sepp1|20363|selenoprotein P, plasma, 1	AK167611|Sepp1|20363|selenoprotein P, plasma, 1	AK168631|Sepp1|20363|selenoprotein P, plasma, 1	AK168747|Sepp1|20363|selenoprotein P, plasma, 1	AK168926|Sepp1|20363|selenoprotein P, plasma, 1	AK169011|Sepp1|20363|selenoprotein P, plasma, 1	AK169158|Sepp1|20363|selenoprotein P, plasma, 1	AK169362|Sepp1|20363|selenoprotein P, plasma, 1	AK159894|Sepp1|20363|selenoprotein P, plasma, 1	AK168583|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr19_+_4594318_4594387	25.1626	HNF4A_NR2F1,2.p2	NM_008797|Pcx|18563|pyruvate carboxylase	L09192|Pcx|18563|pyruvate carboxylase
mm9_v1_chr17_-_35018943_35019021	24.8074	HNF4A_NR2F1,2.p2	M57891|C2|12263|complement component 2 (within H-2S)	BC011086|C2|12263|complement component 2 (within H-2S)
mm9_v1_chr1_-_45982242_45982463	24.7228	HNF4A_NR2F1,2.p2	AK008700|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF231120|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF215637|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AF226613|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	BC003438|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK159855|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK144780|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK147137|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK159294|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK167608|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	NM_016917|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1	AK033987|Slc40a1|53945|solute carrier family 40 (iron-regulated transporter), member 1
mm9_v1_chr6_+_72306146_72306241	23.8239	HNF4A_NR2F1,2.p2	BC014685|Tmem150a|232086|transmembrane protein 150A
mm9_v1_chr3_-_129035406_129035666	23.7946	HNF4A_NR2F1,2.p2	DQ000292|Enpep|13809|glutamyl aminopeptidase	M29961|Enpep|13809|glutamyl aminopeptidase	BC127060|Enpep|13809|glutamyl aminopeptidase	BC064061|Enpep|13809|glutamyl aminopeptidase	AK128975|Enpep|13809|glutamyl aminopeptidase	AK034613|Enpep|13809|glutamyl aminopeptidase	AK146808|Enpep|13809|glutamyl aminopeptidase	NM_007934|Enpep|13809|glutamyl aminopeptidase
mm9_v1_chr11_-_3831515_3831585	23.7452	HNF4A_NR2F1,2.p2	AK197212|Tcn2|21452|transcobalamin 2	AF090686|Tcn2|21452|transcobalamin 2
mm9_v1_chr8_+_58773321_58773362	23.6578	HNF4A_NR2F1,2.p2	NM_008278|Hpgd|15446|hydroxyprostaglandin dehydrogenase 15 (NAD)
mm9_v1_chr17_-_34960292_34960410	23.46	HNF4A_NR2F1,2.p2	M12384|C4a|625018|complement component 4A (Rodgers blood group)	BC141050|C4a|625018|complement component 4A (Rodgers blood group)	M21576|C4a|625018|complement component 4A (Rodgers blood group)	NM_011413|C4a|625018|complement component 4A (Rodgers blood group)	AK129017|C4a|625018|complement component 4A (Rodgers blood group)
mm9_v1_chr19_-_44482138_44482204	23.4511	HNF4A_NR2F1,2.p2	BC055453|Scd1|20249|stearoyl-Coenzyme A desaturase 1	AK148103|Scd1|20249|stearoyl-Coenzyme A desaturase 1	NM_009127|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr9_-_46043339_46043387	23.1099	HNF4A_NR2F1,2.p2	BC021776|Apoc3|11814|apolipoprotein C-III	AK002908|Apoc3|11814|apolipoprotein C-III	NM_023114|Apoc3|11814|apolipoprotein C-III	L04150|Apoc3|11814|apolipoprotein C-III	AK008260|Apoc3|11814|apolipoprotein C-III
mm9_v1_chr19_-_44482033_44482056	23.0637	HNF4A_NR2F1,2.p2	AF509567|Scd1|20249|stearoyl-Coenzyme A desaturase 1	AF509570|Scd1|20249|stearoyl-Coenzyme A desaturase 1	BC007474|Scd1|20249|stearoyl-Coenzyme A desaturase 1	AK142630|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr7_-_31840594_31840627	22.999	HNF4A_NR2F1,2.p2	AF089734|Fxyd1|56188|FXYD domain-containing ion transport regulator 1
mm9_v1_chr17_-_34880784_34880841	22.83	HNF4A_NR2F1,2.p2	BC158005|C4b|12268|complement component 4B (Childo blood group)	BC150743|C4b|12268|complement component 4B (Childo blood group)	BC039141|C4b|12268|complement component 4B (Childo blood group)	BC067394|C4b|12268|complement component 4B (Childo blood group)	BC067409|C4b|12268|complement component 4B (Childo blood group)	BC055297|C4b|12268|complement component 4B (Childo blood group)	AK172637|C4b|12268|complement component 4B (Childo blood group)	AK157954|C4b|12268|complement component 4B (Childo blood group)	AK158256|C4b|12268|complement component 4B (Childo blood group)	AK158475|C4b|12268|complement component 4B (Childo blood group)	AK171644|C4b|12268|complement component 4B (Childo blood group)	M11729|C4b|12268|complement component 4B (Childo blood group)	NM_009780|C4b|12268|complement component 4B (Childo blood group)
mm9_v1_chr7_+_50699457_50699514	22.7946	HNF4A_NR2F1,2.p2	AK013284|Etfb|110826|electron transferring flavoprotein, beta polypeptide	BC069877|Etfb|110826|electron transferring flavoprotein, beta polypeptide	AK002407|Etfb|110826|electron transferring flavoprotein, beta polypeptide	AK150293|Etfb|110826|electron transferring flavoprotein, beta polypeptide	BC049237|Etfb|110826|electron transferring flavoprotein, beta polypeptide	NM_026695|Etfb|110826|electron transferring flavoprotein, beta polypeptide
mm9_v1_chr1_-_122017495_122017589	22.6563	HNF4A_NR2F1,2.p2	AM000002|Dbi|13167|diazepam binding inhibitor	NM_001037999|Dbi|13167|diazepam binding inhibitor	BC028874|Dbi|13167|diazepam binding inhibitor	EF437365|Dbi|13167|diazepam binding inhibitor
mm9_v1_chr11_-_83406475_83406588	22.4338	HNF4A_NR2F1,2.p2	BC002073|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128188|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128189|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128190|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128191|Ccl6|20305|chemokine (C-C motif) ligand 6	AF128192|Ccl6|20305|chemokine (C-C motif) ligand 6	AK002697|Ccl6|20305|chemokine (C-C motif) ligand 6	AK008547|Ccl6|20305|chemokine (C-C motif) ligand 6	AK150336|Ccl6|20305|chemokine (C-C motif) ligand 6	M58004|Ccl6|20305|chemokine (C-C motif) ligand 6	AK154553|Ccl6|20305|chemokine (C-C motif) ligand 6	NM_009139|Ccl6|20305|chemokine (C-C motif) ligand 6
mm9_v1_chr6_-_124492297_124492394	22.3025	HNF4A_NR2F1,2.p2	BC022123|C1s|50908|complement component 1, s subcomponent	BC018319|C1s|50908|complement component 1, s subcomponent	NM_144938|C1s|50908|complement component 1, s subcomponent	AK087522|C1s|50908|complement component 1, s subcomponent	AF459019|C1s|50908|complement component 1, s subcomponent	AK172453|C1s|50908|complement component 1, s subcomponent	NM_001097617|C1s|50908|complement component 1, s subcomponent
mm9_v1_chr15_+_101933364_101933418	22.278	HNF4A_NR2F1,2.p2	AK147789|Tenc1|209039|tensin like C1 domain-containing phosphatase	AK147941|Tenc1|209039|tensin like C1 domain-containing phosphatase	BC042190|Tenc1|209039|tensin like C1 domain-containing phosphatase	NM_153533|Tenc1|209039|tensin like C1 domain-containing phosphatase
mm9_v1_chr19_+_46206383_46206393	21.9041	HNF4A_NR2F1,2.p2	NM_007703|Elovl3|12686|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3	U97107|Elovl3|12686|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3	BC016468|Elovl3|12686|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
mm9_v1_chr16_+_8513513_8513607	21.7584	HNF4A_NR2F1,2.p2	NM_001170978|Abat|268860|4-aminobutyrate aminotransferase	NM_172961|Abat|268860|4-aminobutyrate aminotransferase	AK132282|Abat|268860|4-aminobutyrate aminotransferase	AK165348|Abat|268860|4-aminobutyrate aminotransferase	AK160802|Abat|268860|4-aminobutyrate aminotransferase	AK083062|Abat|268860|4-aminobutyrate aminotransferase	AK036128|Abat|268860|4-aminobutyrate aminotransferase	BC058079|Abat|268860|4-aminobutyrate aminotransferase	BC058521|Abat|268860|4-aminobutyrate aminotransferase
mm9_v1_chr19_-_44481898_44481917	21.5092	HNF4A_NR2F1,2.p2	CT010171|Scd1|20249|stearoyl-Coenzyme A desaturase 1	CT010332|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr17_-_57354126_57354196	21.4424	HNF4A_NR2F1,2.p2	BC029976|C3|12266|complement component 3
mm9_v1_chr6_-_128476708_128476738	21.0682	HNF4A_NR2F1,2.p2	M93264|Pzp|11287|pregnancy zone protein	NM_007376|Pzp|11287|pregnancy zone protein
mm9_v1_chr6_+_90424727_90424917	20.9776	HNF4A_NR2F1,2.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr6_+_138089041_138089110	20.1902	HNF4A_NR2F1,2.p2	AK005122|Mgst1|56615|microsomal glutathione S-transferase 1	NM_019946|Mgst1|56615|microsomal glutathione S-transferase 1	AK002800|Mgst1|56615|microsomal glutathione S-transferase 1
mm9_v1_chr7_+_148106800_148106851	20.1296	HNF4A_NR2F1,2.p2	NM_001081389|Nlrp6|101613|NLR family, pyrin domain containing 6	FJ222825|Nlrp6|101613|NLR family, pyrin domain containing 6
mm9_v1_chr13_-_94407590_94407712	20.0473	HNF4A_NR2F1,2.p2	NM_016668|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr8_+_11443165_11443220	19.5667	HNF4A_NR2F1,2.p2	BC013560|Col4a2|12827|collagen, type IV, alpha 2
mm9_v1_chr19_-_44471675_44471892	19.4745	HNF4A_NR2F1,2.p2	AK012370|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr2_+_122090555_122090603	19.4741	HNF4A_NR2F1,2.p2	AK216108|Sord|20322|sorbitol dehydrogenase
mm9_v1_chr3_+_98084352_98084426	19.1552	HNF4A_NR2F1,2.p2	NM_008256|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004865|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK004902|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	AK098104|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC014714|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	BC024744|Hmgcs2|15360|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
mm9_v1_chr1_+_159456274_159456300	19.0228	HNF4A_NR2F1,2.p2	AK132144|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	AB063356|Sec16b|89867|SEC16 homolog B (S. cerevisiae)	NM_001159986|Sec16b|89867|SEC16 homolog B (S. cerevisiae)
mm9_v1_chr1_-_157659936_157660032	18.9355	HNF4A_NR2F1,2.p2	AB044284|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK170449|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK171127|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK149465|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK163119|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK004880|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK166839|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK169920|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK083938|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	AK169877|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	BC076590|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	NM_001024945|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1	NM_023268|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1
mm9_v1_chr19_-_39961258_39961288	18.8874	HNF4A_NR2F1,2.p2	NM_001104525|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69	BC145630|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69
mm9_v1_chr3_+_90346956_90347018	18.8672	HNF4A_NR2F1,2.p2	AK002991|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr3_+_59835700_59835727	18.8162	HNF4A_NR2F1,2.p2	NM_023383|Aadac|67758|arylacetamide deacetylase (esterase)	AK008244|Aadac|67758|arylacetamide deacetylase (esterase)	BC054823|Aadac|67758|arylacetamide deacetylase (esterase)	BC019999|Aadac|67758|arylacetamide deacetylase (esterase)
mm9_v1_chr9_-_21940154_21940189	18.749	HNF4A_NR2F1,2.p2	AK010865|Acp5|11433|acid phosphatase 5, tartrate resistant	AK011915|Acp5|11433|acid phosphatase 5, tartrate resistant	NM_001102405|Acp5|11433|acid phosphatase 5, tartrate resistant
mm9_v1_chr19_-_39887217_39887303	18.5877	HNF4A_NR2F1,2.p2	AF047727|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139471|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139472|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	NM_010004|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40
mm9_v1_chr10_-_80555271_80555374	18.5732	HNF4A_NR2F1,2.p2	AK050186|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	AF392874|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	BC028820|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr16_+_33794452_33794574	18.4306	HNF4A_NR2F1,2.p2	BC024321|Muc13|17063|mucin 13, epithelial transmembrane	AK132274|Muc13|17063|mucin 13, epithelial transmembrane
mm9_v1_chr12_-_104976382_104976400	18.4274	HNF4A_NR2F1,2.p2	NM_009244|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr4_-_61335031_61335133	18.3023	HNF4A_NR2F1,2.p2	EU882231|Mup10|100039008|major urinary protein 10	AJ309921|Mup10|100039008|major urinary protein 10	EU882232|Mup19|100189605|major urinary protein 19	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC059097|Mup2|17841|major urinary protein 2	BC099597|Mup1|17840|major urinary protein 1	BC055353|LOC100048884|100048884|novel member of the major urinary protein (Mup) gene family	BC106092|Mup1|17840|major urinary protein 1	BC037152|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M16356|Mup2|17841|major urinary protein 2	M28649|Mup1|17840|major urinary protein 1	BC012259|Mup2|17841|major urinary protein 2	AK013259|Mup19|100189605|major urinary protein 19
mm9_v1_chr11_+_101229029_101229043	18.2961	HNF4A_NR2F1,2.p2	AK050279|G6pc|14377|glucose-6-phosphatase, catalytic	AK052656|G6pc|14377|glucose-6-phosphatase, catalytic	U00445|G6pc|14377|glucose-6-phosphatase, catalytic	BC013448|G6pc|14377|glucose-6-phosphatase, catalytic	NM_008061|G6pc|14377|glucose-6-phosphatase, catalytic
mm9_v1_chr2_-_110145819_110145855	18.2568	HNF4A_NR2F1,2.p2	AY033514|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)
mm9_v1_chr11_-_3831963_3832085	18.1118	HNF4A_NR2F1,2.p2	AK143761|Tcn2|21452|transcobalamin 2	NM_001130459|Tcn2|21452|transcobalamin 2	AK161618|Tcn2|21452|transcobalamin 2	AK147176|Tcn2|21452|transcobalamin 2	AK133707|Tcn2|21452|transcobalamin 2	NM_015749|Tcn2|21452|transcobalamin 2	AK170401|Tcn2|21452|transcobalamin 2	NM_001130458|Tcn2|21452|transcobalamin 2
mm9_v1_chr5_-_136220001_136220150	18.1096	HNF4A_NR2F1,2.p2	BC046757|Tmem120a|215210|transmembrane protein 120A	AK028119|Tmem120a|215210|transmembrane protein 120A	NM_172541|Tmem120a|215210|transmembrane protein 120A
mm9_v1_chr5_-_146821173_146821199	17.9773	HNF4A_NR2F1,2.p2	Y11995|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	AF204959|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	BC028855|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	NM_019792|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	AK149541|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25
mm9_v1_chr7_-_52830518_52830542	17.9299	HNF4A_NR2F1,2.p2	AK002217|0610005C13Rik|71661|RIKEN cDNA 0610005C13 gene	AK085337|0610005C13Rik|71661|RIKEN cDNA 0610005C13 gene
mm9_v1_chr5_+_146890818_146890870	17.8325	HNF4A_NR2F1,2.p2	NM_001105160|Cyp3a59|100041449|cytochrome P450, subfamily 3A, polypeptide 59
mm9_v1_chr11_+_98308147_98308152	17.7761	HNF4A_NR2F1,2.p2	NM_010346|Grb7|14786|growth factor receptor bound protein 7	AK057640|Grb7|14786|growth factor receptor bound protein 7
mm9_v1_chr7_-_26181005_26181005	17.695	HNF4A_NR2F1,2.p2	AK029984|Lipe|16890|lipase, hormone sensitive	NM_010719|Lipe|16890|lipase, hormone sensitive
mm9_v1_chr17_-_35019039_35019055	17.6824	HNF4A_NR2F1,2.p2	AK146812|C2|12263|complement component 2 (within H-2S)	NM_013484|C2|12263|complement component 2 (within H-2S)
mm9_v1_chr19_-_44472087_44472105	17.2268	HNF4A_NR2F1,2.p2	AK078704|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr3_-_89084872_89084872	17.2246	HNF4A_NR2F1,2.p2	AK079266|Efna1|13636|ephrin A1	NM_001162425|Efna1|13636|ephrin A1
mm9_v1_chr10_-_80555389_80555406	17.138	HNF4A_NR2F1,2.p2	BC010786|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr11_+_98308333_98308404	17.1192	HNF4A_NR2F1,2.p2	AK145996|Grb7|14786|growth factor receptor bound protein 7	BC081547|Grb7|14786|growth factor receptor bound protein 7	AK168438|Grb7|14786|growth factor receptor bound protein 7	AK220277|Grb7|14786|growth factor receptor bound protein 7	BC003295|Grb7|14786|growth factor receptor bound protein 7
mm9_v1_chr7_+_27620354_27620362	17.0897	HNF4A_NR2F1,2.p2	AK149439|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	NM_007812|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	AK132617|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC138796|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC138798|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5
mm9_v1_chr5_-_115569276_115569358	17.0885	HNF4A_NR2F1,2.p2	L11163|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	AK169428|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	BC055063|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	BC016259|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	NM_007383|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain	AK155361|Acads|11409|acyl-Coenzyme A dehydrogenase, short chain
mm9_v1_chr19_+_39361574_39361600	17.0773	HNF4A_NR2F1,2.p2	NM_007815|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	BC019908|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	D17674|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29
mm9_v1_chr2_+_121183509_121183535	16.905	HNF4A_NR2F1,2.p2	BC025976|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr15_+_98929891_98929938	16.873	HNF4A_NR2F1,2.p2	AK013323|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22	BC039633|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22	NM_176835|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22	AK050294|Dnajc22|72778|DnaJ (Hsp40) homolog, subfamily C, member 22
mm9_v1_chr3_+_118265066_118265156	16.8042	HNF4A_NR2F1,2.p2	AK149426|Dpyd|99586|dihydropyrimidine dehydrogenase	NM_170778|Dpyd|99586|dihydropyrimidine dehydrogenase	BC039699|Dpyd|99586|dihydropyrimidine dehydrogenase
mm9_v1_chr17_-_46575402_46575425	16.7637	HNF4A_NR2F1,2.p2	BC013474|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK143949|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	AK082865|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	NM_144856|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr19_+_39081508_39081535	16.7512	HNF4A_NR2F1,2.p2	AK008580|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55	NM_028089|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55	BC010824|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55	AY206875|Cyp2c55|72082|cytochrome P450, family 2, subfamily c, polypeptide 55
mm9_v1_chr1_+_173155414_173155449	16.7425	HNF4A_NR2F1,2.p2	X04119|Apoa2|11807|apolipoprotein A-II	S79794|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr6_+_48791616_48791654	16.6972	HNF4A_NR2F1,2.p2	NM_001098271|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr7_+_51480806_51480839	16.6662	HNF4A_NR2F1,2.p2	AK002278|Klk1|16612|kallikrein 1	NM_010639|Klk1|16612|kallikrein 1	D10464|Klk1|16612|kallikrein 1	BC053697|Klk1|16612|kallikrein 1	BC010754|Klk1|16612|kallikrein 1	BC027736|Klk1|16612|kallikrein 1
mm9_v1_chr10_+_127213437_127213522	16.5958	HNF4A_NR2F1,2.p2	BC056642|Rdh9|103142|retinol dehydrogenase 9	AF372838|Rdh9|103142|retinol dehydrogenase 9	NM_153133|Rdh9|103142|retinol dehydrogenase 9	BC141318|Rdh9|103142|retinol dehydrogenase 9	AB081322|Rdh9|103142|retinol dehydrogenase 9
mm9_v1_chr16_+_31422377_31422406	16.5432	HNF4A_NR2F1,2.p2	BC043683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_175177|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr3_+_90345082_90345194	16.5219	HNF4A_NR2F1,2.p2	BC020031|S100a16|67860|S100 calcium binding protein A16	NM_026416|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr15_-_82237600_82237628	16.4323	HNF4A_NR2F1,2.p2	BC051039|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	M27167|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	BC057924|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	BC010989|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	NM_010005|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10	NM_010005|Cyp2d10|13101|cytochrome P450, family 2, subfamily d, polypeptide 10
mm9_v1_chr19_-_8206403_8206471	16.3021	HNF4A_NR2F1,2.p2	BC139174|Gm5631|434674|predicted gene 5631	AK052719|Gm5631|434674|predicted gene 5631	NM_001013820|Gm5631|434674|predicted gene 5631
mm9_v1_chr10_-_6806261_6806284	16.0582	HNF4A_NR2F1,2.p2	AK002363|Iyd|70337|iodotyrosine deiodinase	NM_027391|Iyd|70337|iodotyrosine deiodinase	BC023358|Iyd|70337|iodotyrosine deiodinase
mm9_v1_chr13_-_94407455_94407526	16.0406	HNF4A_NR2F1,2.p2	AF033381|Bhmt|12116|betaine-homocysteine methyltransferase	BC093510|Bhmt|12116|betaine-homocysteine methyltransferase	BC037004|Bhmt|12116|betaine-homocysteine methyltransferase	AK077108|Bhmt|12116|betaine-homocysteine methyltransferase	AK149457|Bhmt|12116|betaine-homocysteine methyltransferase	AK166818|Bhmt|12116|betaine-homocysteine methyltransferase	AK149431|Bhmt|12116|betaine-homocysteine methyltransferase	AK166754|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr7_+_27620380_27620397	15.961	HNF4A_NR2F1,2.p2	BC011233|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4	X89864|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC046605|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC058743|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5
mm9_v1_chr17_-_35268696_35268782	15.949	HNF4A_NR2F1,2.p2	AF207820|Apom|55938|apolipoprotein M	NM_018816|Apom|55938|apolipoprotein M	BC021597|Apom|55938|apolipoprotein M	AK004530|Apom|55938|apolipoprotein M
mm9_v1_chr19_-_8479532_8479600	15.9369	HNF4A_NR2F1,2.p2	BC132146|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	BC132336|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	BC016496|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	BC050265|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	AK052592|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	AK040781|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	AK050438|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	AK080180|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	NM_177002|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene	AK057654|C730048C13Rik|319800|RIKEN cDNA C730048C13 gene
mm9_v1_chr2_+_169459145_169459258	15.8894	HNF4A_NR2F1,2.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr9_-_121825407_121825416	15.7904	HNF4A_NR2F1,2.p2	BC049969|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	AF090317|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010973|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010974|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr2_-_13413502_13413502	15.7039	HNF4A_NR2F1,2.p2	NM_001081084|Cubn|65969|cubilin (intrinsic factor-cobalamin receptor)
mm9_v1_chr19_+_12707680_12707797	15.6308	HNF4A_NR2F1,2.p2	AK039262|Glyat|107146|glycine-N-acyltransferase	NM_145935|Glyat|107146|glycine-N-acyltransferase
mm9_v1_chr10_+_58866370_58866441	15.5651	HNF4A_NR2F1,2.p2	AK008035|Pla2g12b|69836|phospholipase A2, group XIIB	AY358033|Pla2g12b|69836|phospholipase A2, group XIIB	AF339738|Pla2g12b|69836|phospholipase A2, group XIIB	BC021592|Pla2g12b|69836|phospholipase A2, group XIIB	NM_023530|Pla2g12b|69836|phospholipase A2, group XIIB
mm9_v1_chr17_-_31266539_31266557	15.4743	HNF4A_NR2F1,2.p2	BC011042|Tff3|21786|trefoil factor 3, intestinal	AK008538|Tff3|21786|trefoil factor 3, intestinal	D38410|Tff3|21786|trefoil factor 3, intestinal	NM_011575|Tff3|21786|trefoil factor 3, intestinal
mm9_v1_chr7_+_29618812_29619148	15.4706	HNF4A_NR2F1,2.p2	EF017938|Lgals4|16855|lectin, galactose binding, soluble 4	EF017939|Lgals4|16855|lectin, galactose binding, soluble 4	EF017942|Lgals6|16857|lectin, galactose binding, soluble 6	AK145734|Lgals4|16855|lectin, galactose binding, soluble 4	BC030297|Lgals4|16855|lectin, galactose binding, soluble 4	NM_010706|Lgals4|16855|lectin, galactose binding, soluble 4	BC141106|Lgals4|16855|lectin, galactose binding, soluble 4	BC145387|Lgals4|16855|lectin, galactose binding, soluble 4	AY044870|Lgals4|16855|lectin, galactose binding, soluble 4
mm9_v1_chr16_-_21787906_21787931	15.2801	HNF4A_NR2F1,2.p2	NM_023737|Ehhadh|74147|enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
mm9_v1_chr7_+_27904997_27905027	15.2792	HNF4A_NR2F1,2.p2	BC011089|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2	BC024742|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr7_+_127317371_127317410	15.2233	HNF4A_NR2F1,2.p2	NM_028085|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	AK008229|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	BC115784|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B	BC118013|Anks4b|72074|ankyrin repeat and sterile alpha motif domain containing 4B
mm9_v1_chr9_-_121825422_121825428	15.1317	HNF4A_NR2F1,2.p2	NM_010012|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr17_-_46575337_46575389	15.1254	HNF4A_NR2F1,2.p2	AB069965|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026598|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC026597|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7	BC024119|Slc22a7|108114|solute carrier family 22 (organic anion transporter), member 7
mm9_v1_chr2_-_110145870_110145899	15.0137	HNF4A_NR2F1,2.p2	BC019406|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)	NM_130452|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)	AK050010|Bbox1|170442|butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)
mm9_v1_chr10_+_81022283_81022301	14.9214	HNF4A_NR2F1,2.p2	X73361|Aes|14797|amino-terminal enhancer of split	BC132217|Aes|14797|amino-terminal enhancer of split	BC132219|Aes|14797|amino-terminal enhancer of split	BC145299|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr6_+_124613114_124613226	14.8839	HNF4A_NR2F1,2.p2	NM_145130|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3	AK154062|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3	AK165319|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3	AK169452|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3	AY028317|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3	AK098090|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3	BC006753|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3	AB294194|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3
mm9_v1_chr1_+_173155184_173155238	14.8621	HNF4A_NR2F1,2.p2	NM_013474|Apoa2|11807|apolipoprotein A-II	M79361|Apoa2|11807|apolipoprotein A-II	M79362|Apoa2|11807|apolipoprotein A-II	AK145823|Apoa2|11807|apolipoprotein A-II	X62772|Apoa2|11807|apolipoprotein A-II	BC031786|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr5_-_87964170_87964216	14.8567	HNF4A_NR2F1,2.p2	BC024361|Sult1b1|56362|sulfotransferase family 1B, member 1
mm9_v1_chr7_+_51720804_51720838	14.7794	HNF4A_NR2F1,2.p2	AK002587|Aspdh|68352|aspartate dehydrogenase domain containing	NM_026690|Aspdh|68352|aspartate dehydrogenase domain containing	BC019451|Aspdh|68352|aspartate dehydrogenase domain containing
mm9_v1_chrX_+_9829439_9829558	14.7727	HNF4A_NR2F1,2.p2	AK050930|Otc|18416|ornithine transcarbamylase	NM_008769|Otc|18416|ornithine transcarbamylase	BC024893|Otc|18416|ornithine transcarbamylase	M17030|Otc|18416|ornithine transcarbamylase
mm9_v1_chrX_+_20126893_20126943	14.7708	HNF4A_NR2F1,2.p2	AK146465|Rgn|19733|regucalcin	BC012710|Rgn|19733|regucalcin	NM_009060|Rgn|19733|regucalcin	U28937|Rgn|19733|regucalcin
mm9_v1_chr11_-_100007218_100007243	14.7275	HNF4A_NR2F1,2.p2	BC034561|Krt19|16669|keratin 19	M28698|Krt19|16669|keratin 19	AB472075|Krt19|16669|keratin 19	BC085304|Krt19|16669|keratin 19	NM_008471|Krt19|16669|keratin 19
mm9_v1_chr9_+_62705890_62705945	14.7141	HNF4A_NR2F1,2.p2	AY061807|Calml4|75600|calmodulin-like 4	NM_001102468|Calml4|75600|calmodulin-like 4	NM_138304|Calml4|75600|calmodulin-like 4	AK008039|Calml4|75600|calmodulin-like 4	BC013541|Calml4|75600|calmodulin-like 4	AK146656|Calml4|75600|calmodulin-like 4	BC023475|Calml4|75600|calmodulin-like 4
mm9_v1_chr15_+_101980990_101981035	14.6262	HNF4A_NR2F1,2.p2	BC025931|Soat2|223920|sterol O-acyltransferase 2	NM_146064|Soat2|223920|sterol O-acyltransferase 2	AF078751|Soat2|223920|sterol O-acyltransferase 2
mm9_v1_chr3_-_137794277_137794364	14.5674	HNF4A_NR2F1,2.p2	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chr5_-_104406333_104406376	14.4093	HNF4A_NR2F1,2.p2	AY101768|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13
mm9_v1_chr7_+_147279293_147279306	14.3262	HNF4A_NR2F1,2.p2	NM_009475|Prap1|22264|proline-rich acidic protein 1	U28486|Prap1|22264|proline-rich acidic protein 1	BC051092|Prap1|22264|proline-rich acidic protein 1
mm9_v1_chr10_-_25255955_25256077	14.3066	HNF4A_NR2F1,2.p2	AK008073|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene	NM_001195596|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene
mm9_v1_chr14_+_32031041_32031060	14.2971	HNF4A_NR2F1,2.p2	AK129018|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	AK137463|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	AB127607|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	NM_001025379|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	BC115440|Sema3g|218877|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
mm9_v1_chr15_-_96850752_96850787	14.2643	HNF4A_NR2F1,2.p2	BC031717|Slc38a4|69354|solute carrier family 38, member 4	AY027919|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr16_+_33794122_33794122	14.2393	HNF4A_NR2F1,2.p2	J04634|Muc13|17063|mucin 13, epithelial transmembrane	NM_010739|Muc13|17063|mucin 13, epithelial transmembrane
mm9_v1_chr19_-_39815529_39815559	14.1388	HNF4A_NR2F1,2.p2	BC019468|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr18_+_85020800_85020860	14.1348	HNF4A_NR2F1,2.p2	BC024341|Cyb5|109672|cytochrome b-5	AK002426|Cyb5|109672|cytochrome b-5	AK013210|Cyb5|109672|cytochrome b-5	NM_025797|Cyb5|109672|cytochrome b-5
mm9_v1_chr16_-_21787868_21787881	14.0891	HNF4A_NR2F1,2.p2	BC016899|Ehhadh|74147|enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase	AK004867|Ehhadh|74147|enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
mm9_v1_chr1_-_88998180_88998187	14.0519	HNF4A_NR2F1,2.p2	NM_001081082|Alpi|76768|alkaline phosphatase, intestinal
mm9_v1_chr15_+_6395353_6395370	14.047	HNF4A_NR2F1,2.p2	X05475|C9|12279|complement component 9
mm9_v1_chr10_+_81022229_81022246	14.0374	HNF4A_NR2F1,2.p2	AK131845|Aes|14797|amino-terminal enhancer of split	AK131994|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr4_+_97444312_97444317	14.0292	HNF4A_NR2F1,2.p2	NM_001122953|Nfia|18027|nuclear factor I/A	NM_010905|Nfia|18027|nuclear factor I/A
mm9_v1_chr12_-_86715324_86715411	13.9796	HNF4A_NR2F1,2.p2	AK186798|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr7_-_142720274_142720338	13.9437	HNF4A_NR2F1,2.p2	AK085267|Clrn3|212070|clarin 3	AK033715|Clrn3|212070|clarin 3	BC036176|Clrn3|212070|clarin 3	AK146608|Clrn3|212070|clarin 3	NM_178669|Clrn3|212070|clarin 3
mm9_v1_chr18_+_85020742_85020795	13.8911	HNF4A_NR2F1,2.p2	AK132102|Cyb5|109672|cytochrome b-5
mm9_v1_chr7_-_26180629_26180730	13.8118	HNF4A_NR2F1,2.p2	BC053502|Lipe|16890|lipase, hormone sensitive
mm9_v1_chr3_-_79432487_79432704	13.7511	HNF4A_NR2F1,2.p2	AK187002|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK181850|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK169686|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK037969|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	BC057670|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK002483|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	BC012522|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK028686|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK075673|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK141684|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK085493|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	AK152624|Etfdh|66841|electron transferring flavoprotein, dehydrogenase	NM_025794|Etfdh|66841|electron transferring flavoprotein, dehydrogenase
mm9_v1_chr3_-_121518046_121518134	13.6962	HNF4A_NR2F1,2.p2	BC054446|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK153298|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK004660|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK081952|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK144060|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	BC009119|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	NM_008991|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3
mm9_v1_chr10_+_81022304_81022369	13.6752	HNF4A_NR2F1,2.p2	AK158714|Aes|14797|amino-terminal enhancer of split	NM_010347|Aes|14797|amino-terminal enhancer of split	L12140|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr9_-_103119803_103119823	13.663	HNF4A_NR2F1,2.p2	M23015|Trf|22041|transferrin	S67218|Trf|22041|transferrin
mm9_v1_chrX_+_93650774_93650774	13.6347	HNF4A_NR2F1,2.p2	NM_001159628|Heph|15203|hephaestin	NM_010417|Heph|15203|hephaestin
mm9_v1_chr9_+_46048812_46048926	13.6165	HNF4A_NR2F1,2.p2	NM_007468|Apoa4|11808|apolipoprotein A-IV
mm9_v1_chr8_-_95753501_95753517	13.5964	HNF4A_NR2F1,2.p2	AK144549|Ces1e|13897|carboxylesterase 1E	NM_133660|Ces1e|13897|carboxylesterase 1E
mm9_v1_chr12_+_7984451_7984482	13.5303	HNF4A_NR2F1,2.p2	BC100607|Apob|238055|apolipoprotein B	BC028880|Apob|238055|apolipoprotein B	BC038263|Apob|238055|apolipoprotein B	NM_009693|Apob|238055|apolipoprotein B
mm9_v1_chr3_+_137949734_137949755	13.4776	HNF4A_NR2F1,2.p2	M22611|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr17_+_57201623_57201743	13.4748	HNF4A_NR2F1,2.p2	AK077528|Crb3|224912|crumbs homolog 3 (Drosophila)	AK167279|Crb3|224912|crumbs homolog 3 (Drosophila)	BC024462|Crb3|224912|crumbs homolog 3 (Drosophila)	NM_177638|Crb3|224912|crumbs homolog 3 (Drosophila)
mm9_v1_chr4_-_137923869_137923874	13.423	HNF4A_NR2F1,2.p2	BC050114|Cda|72269|cytidine deaminase	NM_028176|Cda|72269|cytidine deaminase	AK008793|Cda|72269|cytidine deaminase
mm9_v1_chr17_-_26005645_26005674	13.3613	HNF4A_NR2F1,2.p2	BC024332|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr2_-_25356025_25356025	13.2363	HNF4A_NR2F1,2.p2	BC019967|C8g|69379|complement component 8, gamma polypeptide	NM_027062|C8g|69379|complement component 8, gamma polypeptide
mm9_v1_chr9_+_107479247_107479317	13.2287	HNF4A_NR2F1,2.p2	AK028942|Hyal1|15586|hyaluronoglucosaminidase 1	NM_008317|Hyal1|15586|hyaluronoglucosaminidase 1	BC021636|Hyal1|15586|hyaluronoglucosaminidase 1	AF011567|Hyal1|15586|hyaluronoglucosaminidase 1
mm9_v1_chr18_+_20716598_20716640	13.2147	HNF4A_NR2F1,2.p2	NM_007883|Dsg2|13511|desmoglein 2	BC131653|Dsg2|13511|desmoglein 2	BC131654|Dsg2|13511|desmoglein 2
mm9_v1_chr11_-_4604308_4604350	13.1466	HNF4A_NR2F1,2.p2	AK168491|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X	BC024518|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X	AK002227|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X	BC087874|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X	BC100591|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X	AK012489|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X	AK003881|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X	NM_197979|Uqcr10|66152|ubiquinol-cytochrome c reductase, complex III subunit X
mm9_v1_chr9_+_46048993_46049057	13.056	HNF4A_NR2F1,2.p2	AK169277|Apoa4|11808|apolipoprotein A-IV
mm9_v1_chr16_-_20716708_20716708	13.0402	HNF4A_NR2F1,2.p2	NM_009900|Clcn2|12724|chloride channel 2
mm9_v1_chr8_-_13200534_13200625	13.0079	HNF4A_NR2F1,2.p2	AK017251|Grtp1|66790|GH regulated TBC protein 1	AK017197|Grtp1|66790|GH regulated TBC protein 1	AK044437|Grtp1|66790|GH regulated TBC protein 1	AK082863|Grtp1|66790|GH regulated TBC protein 1	AK149322|Grtp1|66790|GH regulated TBC protein 1	NM_025768|Grtp1|66790|GH regulated TBC protein 1	AK007905|Grtp1|66790|GH regulated TBC protein 1
mm9_v1_chr12_-_85741801_85741813	13.0008	HNF4A_NR2F1,2.p2	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr11_-_53236630_53236639	12.9372	HNF4A_NR2F1,2.p2	BC089593|Leap2|259301|liver-expressed antimicrobial peptide 2	AJ409055|Leap2|259301|liver-expressed antimicrobial peptide 2	NM_153069|Leap2|259301|liver-expressed antimicrobial peptide 2
mm9_v1_chr8_+_46035561_46035561	12.9081	HNF4A_NR2F1,2.p2	AJ250768|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)	NM_001081286|Fat1|14107|FAT tumor suppressor homolog 1 (Drosophila)
mm9_v1_chr18_+_74893369_74893418	12.9079	HNF4A_NR2F1,2.p2	AK033484|Myo5b|17919|myosin VB
mm9_v1_chr7_-_52359079_52359191	12.9052	HNF4A_NR2F1,2.p2	BC003786|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	D37874|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK152879|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK146933|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK008167|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	AK008360|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter	NM_010189|Fcgrt|14132|Fc receptor, IgG, alpha chain transporter
mm9_v1_chr17_-_84246141_84246165	12.8769	HNF4A_NR2F1,2.p2	AK002295|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase
mm9_v1_chr16_-_23029138_23029145	12.855	HNF4A_NR2F1,2.p2	BC108335|Kng2|385643|kininogen 2
mm9_v1_chr9_+_46049140_46049166	12.8126	HNF4A_NR2F1,2.p2	AK168687|Apoa4|11808|apolipoprotein A-IV	AK004856|Apoa4|11808|apolipoprotein A-IV	AK161535|Apoa4|11808|apolipoprotein A-IV	M64248|Apoa4|11808|apolipoprotein A-IV	M64249|Apoa4|11808|apolipoprotein A-IV	M64250|Apoa4|11808|apolipoprotein A-IV	BC010769|Apoa4|11808|apolipoprotein A-IV	BC050149|Apoa4|11808|apolipoprotein A-IV
mm9_v1_chr8_+_11313002_11313023	12.8121	HNF4A_NR2F1,2.p2	J04695|Col4a2|12827|collagen, type IV, alpha 2
mm9_v1_chr10_-_79446784_79446797	12.7908	HNF4A_NR2F1,2.p2	AY096036|ORF61|216157|open reading frame 61	AY096037|ORF61|216157|open reading frame 61
mm9_v1_chr15_-_89011113_89011248	12.7185	HNF4A_NR2F1,2.p2	BC031202|Plxnb2|140570|plexin B2	AK154627|Plxnb2|140570|plexin B2	BC157960|Plxnb2|140570|plexin B2	BC157961|Plxnb2|140570|plexin B2	AK147538|Plxnb2|140570|plexin B2	NM_138749|Plxnb2|140570|plexin B2
mm9_v1_chr18_+_74938827_74938895	12.6963	HNF4A_NR2F1,2.p2	AK146007|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK050101|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK167567|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK169359|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	NM_177470|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK167715|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK002555|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	BC028901|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)
mm9_v1_chr15_-_102019443_102019495	12.6791	HNF4A_NR2F1,2.p2	AK005015|Csad|246277|cysteine sulfinic acid decarboxylase	NM_144942|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr9_-_21936207_21936326	12.674	HNF4A_NR2F1,2.p2	BC012911|Acp5|11433|acid phosphatase 5, tartrate resistant	BC029644|Acp5|11433|acid phosphatase 5, tartrate resistant	BC019160|Acp5|11433|acid phosphatase 5, tartrate resistant	NM_001102404|Acp5|11433|acid phosphatase 5, tartrate resistant
mm9_v1_chr15_-_82160509_82160628	12.6539	HNF4A_NR2F1,2.p2	AK198447|Naga|17939|N-acetyl galactosaminidase, alpha
mm9_v1_chr7_+_28914482_28914484	12.6453	HNF4A_NR2F1,2.p2	AK035473|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	AK035528|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene	NM_001164655|9530053A07Rik|319482|RIKEN cDNA 9530053A07 gene
mm9_v1_chr6_-_5206215_5206292	12.6409	HNF4A_NR2F1,2.p2	L76193|Pon3|269823|paraoxonase 3	AK076090|Pon3|269823|paraoxonase 3	AK088572|Pon3|269823|paraoxonase 3	NM_173006|Pon3|269823|paraoxonase 3	BC099416|Pon3|269823|paraoxonase 3
mm9_v1_chr17_-_26005680_26005704	12.585	HNF4A_NR2F1,2.p2	AK020614|Fam195a|68241|family with sequence similarity 195, member A	AK003564|Fam195a|68241|family with sequence similarity 195, member A	NM_026633|Fam195a|68241|family with sequence similarity 195, member A
mm9_v1_chr6_-_142421466_142421628	12.5402	HNF4A_NR2F1,2.p2	BC021322|Gys2|232493|glycogen synthase 2	BC158081|Gys2|232493|glycogen synthase 2	NM_145572|Gys2|232493|glycogen synthase 2
mm9_v1_chr7_+_53152702_53152727	12.5101	HNF4A_NR2F1,2.p2	AK039173|Tmem143|70209|transmembrane protein 143
mm9_v1_chr15_-_102019373_102019395	12.4997	HNF4A_NR2F1,2.p2	AY033912|Csad|246277|cysteine sulfinic acid decarboxylase	AK186014|Csad|246277|cysteine sulfinic acid decarboxylase
mm9_v1_chr19_-_39815590_39815597	12.4818	HNF4A_NR2F1,2.p2	NM_001039555|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr19_-_44476302_44476309	12.4792	HNF4A_NR2F1,2.p2	AK135642|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr7_-_133819870_133819892	12.4634	HNF4A_NR2F1,2.p2	BC005413|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	NM_133670|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	L02331|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1	AK002700|Sult1a1|20887|sulfotransferase family 1A, phenol-preferring, member 1
mm9_v1_chr11_+_76718046_76718079	12.3929	HNF4A_NR2F1,2.p2	AK009118|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	NM_025655|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC061082|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC022683|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1
mm9_v1_chr17_-_84246073_84246129	12.3721	HNF4A_NR2F1,2.p2	AK002608|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	BC012872|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	BC094021|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase	NM_025325|Haao|107766|3-hydroxyanthranilate 3,4-dioxygenase
mm9_v1_chr7_+_5031809_5032021	12.3554	HNF4A_NR2F1,2.p2	AK155033|Epn1|13854|epsin 1	BC067206|Epn1|13854|epsin 1	BC099682|Epn1|13854|epsin 1	NM_010147|Epn1|13854|epsin 1
mm9_v1_chr6_-_113384474_113384505	12.3548	HNF4A_NR2F1,2.p2	BC099676|Cidec|14311|cell death-inducing DFFA-like effector c
mm9_v1_chr17_-_24112159_24112196	12.3412	HNF4A_NR2F1,2.p2	AJ243866|Prss30|30943|protease, serine, 30	BC010970|Prss30|30943|protease, serine, 30	BC040348|Prss30|30943|protease, serine, 30	NM_013921|Prss30|30943|protease, serine, 30
mm9_v1_chr16_-_13869955_13869977	12.3179	HNF4A_NR2F1,2.p2	AK075829|Pdxdc1|94184|pyridoxal-dependent decarboxylase domain containing 1
mm9_v1_chr6_+_48791481_48791563	12.2712	HNF4A_NR2F1,2.p2	NM_025326|Tmem176a|66058|transmembrane protein 176A	AK002546|Tmem176a|66058|transmembrane protein 176A	AK004315|Tmem176a|66058|transmembrane protein 176A	AK165660|Tmem176a|66058|transmembrane protein 176A	AK150576|Tmem176a|66058|transmembrane protein 176A	AK079378|Tmem176a|66058|transmembrane protein 176A	BC010831|Tmem176a|66058|transmembrane protein 176A	AK162991|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr5_+_35384200_35384209	12.2469	HNF4A_NR2F1,2.p2	AB009294|Hgfac|54426|hepatocyte growth factor activator	NM_019447|Hgfac|54426|hepatocyte growth factor activator	AK007987|Hgfac|54426|hepatocyte growth factor activator	AK169989|Hgfac|54426|hepatocyte growth factor activator
mm9_v1_chr1_+_74438139_74438172	12.2091	HNF4A_NR2F1,2.p2	AY028804|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr7_-_26262552_26262648	12.1841	HNF4A_NR2F1,2.p2	AB236328|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	AB236329|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	AB236330|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	AB236331|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	AB236332|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	X53084|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	X67280|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	X67281|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	X67283|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	M96934|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	M96935|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	BC016891|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	AK085749|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	M77196|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	NM_001039185|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	NM_001039186|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	NM_001039187|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1	NM_011926|Ceacam1|26365|carcinoembryonic antigen-related cell adhesion molecule 1
mm9_v1_chr10_-_22539906_22539933	12.1679	HNF4A_NR2F1,2.p2	AF047418|Tcf21|21412|transcription factor 21	AF029753|Tcf21|21412|transcription factor 21	AB009453|Tcf21|21412|transcription factor 21	AF035717|Tcf21|21412|transcription factor 21	NM_011545|Tcf21|21412|transcription factor 21
mm9_v1_chr7_+_94395160_94395355	12.0366	HNF4A_NR2F1,2.p2	AK169304|Nox4|50490|NADPH oxidase 4	AK087097|Nox4|50490|NADPH oxidase 4	AF261944|Nox4|50490|NADPH oxidase 4	AF276957|Nox4|50490|NADPH oxidase 4	AK050371|Nox4|50490|NADPH oxidase 4	AK085509|Nox4|50490|NADPH oxidase 4	AK149398|Nox4|50490|NADPH oxidase 4	AK149455|Nox4|50490|NADPH oxidase 4	AK149492|Nox4|50490|NADPH oxidase 4	NM_015760|Nox4|50490|NADPH oxidase 4	AK052905|Nox4|50490|NADPH oxidase 4	AB041034|Nox4|50490|NADPH oxidase 4	AB042745|Nox4|50490|NADPH oxidase 4	AF218723|Nox4|50490|NADPH oxidase 4	BC138918|Nox4|50490|NADPH oxidase 4	BC145462|Nox4|50490|NADPH oxidase 4	BC021378|Nox4|50490|NADPH oxidase 4	EU861989|Nox4|50490|NADPH oxidase 4
mm9_v1_chr3_+_96633987_96634064	11.962	HNF4A_NR2F1,2.p2	NM_021517|Pdzk1|59020|PDZ domain containing 1	AK012070|Pdzk1|59020|PDZ domain containing 1	AF220100|Pdzk1|59020|PDZ domain containing 1	AK165415|Pdzk1|59020|PDZ domain containing 1	AF474247|Pdzk1|59020|PDZ domain containing 1	BC013512|Pdzk1|59020|PDZ domain containing 1
mm9_v1_chr10_-_22539936_22539950	11.9194	HNF4A_NR2F1,2.p2	BC053525|Tcf21|21412|transcription factor 21	AK011575|Tcf21|21412|transcription factor 21	AK157289|Tcf21|21412|transcription factor 21
mm9_v1_chr2_-_60122355_60122474	11.885	HNF4A_NR2F1,2.p2	AK004267|Cd302|66205|CD302 antigen	NM_025422|Cd302|66205|CD302 antigen
mm9_v1_chr6_+_117118552_117118673	11.855	HNF4A_NR2F1,2.p2	NM_001012477|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	NM_013655|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	NM_021704|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK157553|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK045092|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	AK075596|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D43804|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D43805|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	L12029|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	L12030|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC046827|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC006640|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC020297|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	BC029335|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	D21072|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	S74318|Cxcl12|20315|chemokine (C-X-C motif) ligand 12	CT010389|Cxcl12|20315|chemokine (C-X-C motif) ligand 12
mm9_v1_chr6_-_142421335_142421382	11.8431	HNF4A_NR2F1,2.p2	AK138992|Gys2|232493|glycogen synthase 2	AK149391|Gys2|232493|glycogen synthase 2
mm9_v1_chr3_+_88940542_88940546	11.8379	HNF4A_NR2F1,2.p2	AK149508|Pklr|18770|pyruvate kinase liver and red blood cell	NM_001099779|Pklr|18770|pyruvate kinase liver and red blood cell	AK149524|Pklr|18770|pyruvate kinase liver and red blood cell
mm9_v1_chr8_+_3655765_3655792	11.7967	HNF4A_NR2F1,2.p2	AK131613|Retn|57264|resistin	AF323080|Retn|57264|resistin	AK131869|Retn|57264|resistin	AF290870|Retn|57264|resistin	NM_022984|Retn|57264|resistin	BC051196|Retn|57264|resistin
mm9_v1_chr5_+_35384213_35384292	11.7915	HNF4A_NR2F1,2.p2	AK165433|Hgfac|54426|hepatocyte growth factor activator	AK144554|Hgfac|54426|hepatocyte growth factor activator	BC019376|Hgfac|54426|hepatocyte growth factor activator	AK149522|Hgfac|54426|hepatocyte growth factor activator	AF099017|Hgfac|54426|hepatocyte growth factor activator	AF224724|Hgfac|54426|hepatocyte growth factor activator	AK075718|Hgfac|54426|hepatocyte growth factor activator
mm9_v1_chr4_+_133953305_133953385	11.6542	HNF4A_NR2F1,2.p2	BC025495|Pafah2|100163|platelet-activating factor acetylhydrolase 2
mm9_v1_chr7_-_148462649_148462686	11.6454	HNF4A_NR2F1,2.p2	BC043336|Cdhr5|72040|cadherin-related family member 5	BC054469|Cdhr5|72040|cadherin-related family member 5	AF462391|Cdhr5|72040|cadherin-related family member 5	AK007988|Cdhr5|72040|cadherin-related family member 5	AK027913|Cdhr5|72040|cadherin-related family member 5	NM_001114322|Cdhr5|72040|cadherin-related family member 5	NM_028069|Cdhr5|72040|cadherin-related family member 5
mm9_v1_chr17_+_26012421_26012476	11.6369	HNF4A_NR2F1,2.p2	AK151352|0610011F06Rik|68347|RIKEN cDNA 0610011F06 gene	NM_026686|0610011F06Rik|68347|RIKEN cDNA 0610011F06 gene	AK170337|0610011F06Rik|68347|RIKEN cDNA 0610011F06 gene	AK002535|0610011F06Rik|68347|RIKEN cDNA 0610011F06 gene	BC069266|0610011F06Rik|68347|RIKEN cDNA 0610011F06 gene
mm9_v1_chr19_+_12708001_12708022	11.6345	HNF4A_NR2F1,2.p2	AK143803|Glyat|107146|glycine-N-acyltransferase	AK143901|Glyat|107146|glycine-N-acyltransferase	BC010799|Glyat|107146|glycine-N-acyltransferase	BC015294|Glyat|107146|glycine-N-acyltransferase
mm9_v1_chr8_-_95753432_95753442	11.63	HNF4A_NR2F1,2.p2	BC019208|Ces1e|13897|carboxylesterase 1E	S80191|Ces1e|13897|carboxylesterase 1E
mm9_v1_chr4_-_58083082_58083145	11.6214	HNF4A_NR2F1,2.p2	AK136952|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr3_+_151100845_151100914	11.567	HNF4A_NR2F1,2.p2	NM_133222|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	AF385682|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1	BC017134|Eltd1|170757|EGF, latrophilin seven transmembrane domain containing 1
mm9_v1_chr2_-_60122146_60122212	11.5646	HNF4A_NR2F1,2.p2	AK002812|Cd302|66205|CD302 antigen
mm9_v1_chr19_-_39723518_39723548	11.5639	HNF4A_NR2F1,2.p2	BC092260|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	BC106142|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	NM_001024719|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	AK149389|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67
mm9_v1_chr10_-_75236129_75236158	11.5567	HNF4A_NR2F1,2.p2	AK144193|Ddt|13202|D-dopachrome tautomerase
mm9_v1_chr11_-_75252976_75253008	11.5509	HNF4A_NR2F1,2.p2	BC026756|Serpinf2|18816|serine (or cysteine) peptidase inhibitor, clade F, member 2	Z36774|Serpinf2|18816|serine (or cysteine) peptidase inhibitor, clade F, member 2	NM_008878|Serpinf2|18816|serine (or cysteine) peptidase inhibitor, clade F, member 2	AK077563|Serpinf2|18816|serine (or cysteine) peptidase inhibitor, clade F, member 2
mm9_v1_chr7_-_20266749_20266811	11.5184	HNF4A_NR2F1,2.p2	BC016889|Apoc4|11425|apolipoprotein C-IV	BC024657|Apoc4|11425|apolipoprotein C-IV	NM_007385|Apoc4|11425|apolipoprotein C-IV	BC100593|Apoc4|11425|apolipoprotein C-IV
mm9_v1_chr1_-_186635045_186635085	11.5074	HNF4A_NR2F1,2.p2	AK011722|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1	AK004989|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr11_-_96168185_96168223	11.4524	HNF4A_NR2F1,2.p2	AK002860|0610040B09Rik|75395|RIKEN cDNA 0610040B09 gene
mm9_v1_chr18_-_32196584_32196632	11.434	HNF4A_NR2F1,2.p2	BC138338|Myo7b|17922|myosin VIIB	BC138341|Myo7b|17922|myosin VIIB	NM_032394|Myo7b|17922|myosin VIIB	AF242411|Myo7b|17922|myosin VIIB
mm9_v1_chr16_+_37580238_37580255	11.3979	HNF4A_NR2F1,2.p2	NM_013547|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr5_+_122550987_122550996	11.3937	HNF4A_NR2F1,2.p2	AK146674|Myl2|17906|myosin, light polypeptide 2, regulatory, cardiac, slow	BC061144|Myl2|17906|myosin, light polypeptide 2, regulatory, cardiac, slow	AK002367|Myl2|17906|myosin, light polypeptide 2, regulatory, cardiac, slow	NM_010861|Myl2|17906|myosin, light polypeptide 2, regulatory, cardiac, slow	M91602|Myl2|17906|myosin, light polypeptide 2, regulatory, cardiac, slow
mm9_v1_chr14_+_122933560_122933681	11.3495	HNF4A_NR2F1,2.p2	AK148002|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	BC006915|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	BC049802|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	AK183916|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide	AK212580|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide
mm9_v1_chr7_-_27724396_27724407	11.278	HNF4A_NR2F1,2.p2	BC151116|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22	BC158034|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22	AK149509|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22	NM_001101467|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22
mm9_v1_chr15_+_6395311_6395349	11.2659	HNF4A_NR2F1,2.p2	BC011137|C9|12279|complement component 9	NM_013485|C9|12279|complement component 9
mm9_v1_chr17_-_46162111_46162111	11.2624	HNF4A_NR2F1,2.p2	NM_001110266|Vegfa|22339|vascular endothelial growth factor A	NM_001110267|Vegfa|22339|vascular endothelial growth factor A	NM_001110268|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr4_-_60152702_60152728	11.2286	HNF4A_NR2F1,2.p2	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2
mm9_v1_chr19_+_43856793_43856893	11.2239	HNF4A_NR2F1,2.p2	NM_013806|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF227274|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282772|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2	AF282773|Abcc2|12780|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm9_v1_chr4_-_128925666_128925738	11.154	HNF4A_NR2F1,2.p2	AK154932|C77080|97130|expressed sequence C77080	NM_001033189|C77080|97130|expressed sequence C77080
mm9_v1_chr14_+_122933538_122933557	11.1473	HNF4A_NR2F1,2.p2	NM_144844|Pcca|110821|propionyl-Coenzyme A carboxylase, alpha polypeptide
mm9_v1_chr7_-_112748624_112748633	11.1025	HNF4A_NR2F1,2.p2	AK145928|Hpx|15458|hemopexin	NM_017371|Hpx|15458|hemopexin
mm9_v1_chr7_+_20550760_20550779	11.0351	HNF4A_NR2F1,2.p2	AK033581|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20	NM_027839|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20	AK018613|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20	BC049361|Ceacam20|71601|carcinoembryonic antigen-related cell adhesion molecule 20
mm9_v1_chr7_-_13583329_13583480	10.9922	HNF4A_NR2F1,2.p2	AF072760|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC115421|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145823|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC145825|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr15_-_82624638_82624663	10.9807	HNF4A_NR2F1,2.p2	BC023241|Cyp2d26|76279|cytochrome P450, family 2, subfamily d, polypeptide 26
mm9_v1_chr3_+_135488454_135488592	10.9757	HNF4A_NR2F1,2.p2	AK028215|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_026228|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	AK016853|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr15_-_89004279_89004426	10.9706	HNF4A_NR2F1,2.p2	BC158086|Plxnb2|140570|plexin B2	BC172162|Plxnb2|140570|plexin B2	NM_001159521|Plxnb2|140570|plexin B2
mm9_v1_chr17_-_46169322_46169332	10.9617	HNF4A_NR2F1,2.p2	NM_001025250|Vegfa|22339|vascular endothelial growth factor A	NM_001025257|Vegfa|22339|vascular endothelial growth factor A	NM_009505|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr4_-_60514761_60514831	10.9452	HNF4A_NR2F1,2.p2	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	BC037152|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	M16355|Mup1|17840|major urinary protein 1	NM_001163010|Mup1|17840|major urinary protein 1	NM_001163011|Mup1|17840|major urinary protein 1	NM_031188|Mup1|17840|major urinary protein 1
mm9_v1_chr2_-_27102239_27102352	10.9428	HNF4A_NR2F1,2.p2	BC003456|Sardh|192166|sarcosine dehydrogenase	NM_138665|Sardh|192166|sarcosine dehydrogenase	AK163515|Sardh|192166|sarcosine dehydrogenase
mm9_v1_chr4_-_117881591_117881662	10.9394	HNF4A_NR2F1,2.p2	AK135889|Ptprf|19268|protein tyrosine phosphatase, receptor type, F
mm9_v1_chr7_-_112748585_112748623	10.9234	HNF4A_NR2F1,2.p2	U89889|Hpx|15458|hemopexin	BC011246|Hpx|15458|hemopexin	BC019901|Hpx|15458|hemopexin
mm9_v1_chrX_+_54043764_54043779	10.9098	HNF4A_NR2F1,2.p2	BC055725|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chrX_+_98572571_98572682	10.883	HNF4A_NR2F1,2.p2	BC026833|Gjb1|14618|gap junction protein, beta 1	NM_008124|Gjb1|14618|gap junction protein, beta 1
mm9_v1_chr17_-_27957398_27957565	10.8826	HNF4A_NR2F1,2.p2	AK143016|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	AK165011|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	AK161603|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	BC132324|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	BC132326|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	BC137573|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	BC137576|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	BC145403|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	NM_001033279|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	NM_001044719|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed
mm9_v1_chr18_+_36508277_36508452	10.8549	HNF4A_NR2F1,2.p2	NM_001081365|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	BC028765|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK167679|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK002512|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK028217|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene	AK089711|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene
mm9_v1_chr11_+_101443690_101443814	10.8316	HNF4A_NR2F1,2.p2	BC022145|Tmem106a|217203|transmembrane protein 106A
mm9_v1_chr9_+_44850426_44850426	10.7837	HNF4A_NR2F1,2.p2	NM_007962|Mpzl2|14012|myelin protein zero-like 2
mm9_v1_chr4_+_139204697_139204813	10.6388	HNF4A_NR2F1,2.p2	AK189375|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr2_+_35139423_35139445	10.6033	HNF4A_NR2F1,2.p2	J04953|Gsn|227753|gelsolin
mm9_v1_chr9_-_44059496_44059546	10.6003	HNF4A_NR2F1,2.p2	AF334612|Pdzd3|170761|PDZ domain containing 3	AK052748|Pdzd3|170761|PDZ domain containing 3	NM_133226|Pdzd3|170761|PDZ domain containing 3
mm9_v1_chr9_-_103118185_103118198	10.5446	HNF4A_NR2F1,2.p2	M23016|Trf|22041|transferrin
mm9_v1_chr14_+_79248971_79249021	10.5409	HNF4A_NR2F1,2.p2	NM_027906|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene	NM_173758|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene	AK089438|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene	AK154108|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene	AK155177|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene
mm9_v1_chr10_-_127325725_127325818	10.522	HNF4A_NR2F1,2.p2	BC024603|Rdh7|54150|retinol dehydrogenase 7	AF056194|Rdh7|54150|retinol dehydrogenase 7	NM_017473|Rdh7|54150|retinol dehydrogenase 7	NM_001150749|Rdh7|54150|retinol dehydrogenase 7
mm9_v1_chr7_-_148086285_148086315	10.4751	HNF4A_NR2F1,2.p2	AK003116|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC027531|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	U15541|Cox8b|12869|cytochrome c oxidase, subunit VIIIb	BC086930|Cox8b|12869|cytochrome c oxidase, subunit VIIIb
mm9_v1_chr10_+_94038001_94038001	10.4612	HNF4A_NR2F1,2.p2	BC026867|Tmcc3|319880|transmembrane and coiled coil domains 3	NM_001168684|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chr8_+_3587791_3587801	10.4482	HNF4A_NR2F1,2.p2	BC043081|2310057J16Rik|69697|RIKEN cDNA 2310057J16 gene	BC048787|2310057J16Rik|69697|RIKEN cDNA 2310057J16 gene
mm9_v1_chr5_-_17341713_17341713	10.392	HNF4A_NR2F1,2.p2	NM_001159555|Cd36|12491|CD36 antigen	NM_007643|Cd36|12491|CD36 antigen
mm9_v1_chr15_+_9265343_9265371	10.3394	HNF4A_NR2F1,2.p2	AK052644|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	AK050128|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	NM_144845|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	BC022134|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	AK041045|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2	BC034837|Ugt3a2|223337|UDP glycosyltransferases 3 family, polypeptide A2
mm9_v1_chr13_+_91881065_91881204	10.3272	HNF4A_NR2F1,2.p2	AK034622|Acot12|74156|acyl-CoA thioesterase 12	AK004905|Acot12|74156|acyl-CoA thioesterase 12	AK033663|Acot12|74156|acyl-CoA thioesterase 12	NM_028790|Acot12|74156|acyl-CoA thioesterase 12	AB078618|Acot12|74156|acyl-CoA thioesterase 12	BC025852|Acot12|74156|acyl-CoA thioesterase 12
mm9_v1_chr17_+_37035062_37035074	10.2563	HNF4A_NR2F1,2.p2	AK033650|Trim31|224762|tripartite motif-containing 31	BC026666|Trim31|224762|tripartite motif-containing 31	NM_146077|Trim31|224762|tripartite motif-containing 31
mm9_v1_chr5_-_138052555_138052672	10.2541	HNF4A_NR2F1,2.p2	AB008548|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK142615|Pcolce|18542|procollagen C-endopeptidase enhancer protein	X57337|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK159430|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK159940|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK144392|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK146829|Pcolce|18542|procollagen C-endopeptidase enhancer protein	NM_008788|Pcolce|18542|procollagen C-endopeptidase enhancer protein	AK162524|Pcolce|18542|procollagen C-endopeptidase enhancer protein
mm9_v1_chr9_-_66891535_66891699	10.2368	HNF4A_NR2F1,2.p2	NM_001164252|Tpm1|22003|tropomyosin 1, alpha	NM_001164253|Tpm1|22003|tropomyosin 1, alpha	NM_001164254|Tpm1|22003|tropomyosin 1, alpha	NM_001164256|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr5_-_138362822_138362852	10.1836	HNF4A_NR2F1,2.p2	X63023|Cyp3a13|13113|cytochrome P450, family 3, subfamily a, polypeptide 13	BC046592|Cyp3a13|13113|cytochrome P450, family 3, subfamily a, polypeptide 13	AK136494|Cyp3a13|13113|cytochrome P450, family 3, subfamily a, polypeptide 13	AK136529|Cyp3a13|13113|cytochrome P450, family 3, subfamily a, polypeptide 13	AK149572|Cyp3a13|13113|cytochrome P450, family 3, subfamily a, polypeptide 13	NM_007819|Cyp3a13|13113|cytochrome P450, family 3, subfamily a, polypeptide 13
mm9_v1_chr1_+_21230683_21230717	10.1835	HNF4A_NR2F1,2.p2	AK014076|Gsta3|14859|glutathione S-transferase, alpha 3	AK149543|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr15_-_82624668_82624681	10.1555	HNF4A_NR2F1,2.p2	AK004915|Cyp2d26|76279|cytochrome P450, family 2, subfamily d, polypeptide 26	NM_029562|Cyp2d26|76279|cytochrome P450, family 2, subfamily d, polypeptide 26
mm9_v1_chr4_-_57156490_57156519	10.1335	HNF4A_NR2F1,2.p2	AB032366|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr3_-_88351996_88352227	10.1282	HNF4A_NR2F1,2.p2	AB232620|Rab25|53868|RAB25, member RAS oncogene family	AF119675|Rab25|53868|RAB25, member RAS oncogene family	BC006624|Rab25|53868|RAB25, member RAS oncogene family	AK003260|Rab25|53868|RAB25, member RAS oncogene family	NM_016899|Rab25|53868|RAB25, member RAS oncogene family
mm9_v1_chr9_+_44850616_44850778	10.1191	HNF4A_NR2F1,2.p2	AF030454|Mpzl2|14012|myelin protein zero-like 2	AK032788|Mpzl2|14012|myelin protein zero-like 2	AK170816|Mpzl2|14012|myelin protein zero-like 2	AK167263|Mpzl2|14012|myelin protein zero-like 2	AK166341|Mpzl2|14012|myelin protein zero-like 2
mm9_v1_chr4_-_94316806_94316834	10.1127	HNF4A_NR2F1,2.p2	BC061228|Lrrc19|100061|leucine rich repeat containing 19	AK033594|Lrrc19|100061|leucine rich repeat containing 19	NM_175305|Lrrc19|100061|leucine rich repeat containing 19
mm9_v1_chr7_-_134195490_134195490	10.0552	HNF4A_NR2F1,2.p2	BC031800|Zg16|69036|zymogen granule protein 16	NM_026918|Zg16|69036|zymogen granule protein 16
mm9_v1_chr9_+_43877511_43877533	10.0272	HNF4A_NR2F1,2.p2	NM_016808|Usp2|53376|ubiquitin specific peptidase 2	BC017517|Usp2|53376|ubiquitin specific peptidase 2	AY255640|Usp2|53376|ubiquitin specific peptidase 2
mm9_v1_chr12_+_88488644_88488668	10.0156	HNF4A_NR2F1,2.p2	BC031777|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	NM_010363|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr11_+_74462965_74463046	10.0006	HNF4A_NR2F1,2.p2	AK145708|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK157310|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154925|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	NM_001081158|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK154146|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK036540|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	AK150045|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene	BC072573|1300001I01Rik|74148|RIKEN cDNA 1300001I01 gene
mm9_v1_chr3_+_116216008_116216058	9.95558	HNF4A_NR2F1,2.p2	AK075831|Dbt|13171|dihydrolipoamide branched chain transacylase E2	BC055890|Dbt|13171|dihydrolipoamide branched chain transacylase E2	L42996|Dbt|13171|dihydrolipoamide branched chain transacylase E2
mm9_v1_chr1_-_164816645_164816658	9.9429	HNF4A_NR2F1,2.p2	AK129026|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr17_+_35051410_35051424	9.93871	HNF4A_NR2F1,2.p2	AK164684|Slc44a4|70129|solute carrier family 44, member 4	NM_023557|Slc44a4|70129|solute carrier family 44, member 4	AK145621|Slc44a4|70129|solute carrier family 44, member 4	BC010808|Slc44a4|70129|solute carrier family 44, member 4	BC052652|Slc44a4|70129|solute carrier family 44, member 4
mm9_v1_chr4_-_11313886_11313929	9.8825	HNF4A_NR2F1,2.p2	AK140848|Esrp1|207920|epithelial splicing regulatory protein 1	NM_194055|Esrp1|207920|epithelial splicing regulatory protein 1
mm9_v1_chr13_+_55501008_55501081	9.87462	HNF4A_NR2F1,2.p2	NM_011392|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	AK018740|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	AB163922|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	U22465|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	BC020529|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1	L33878|Slc34a1|20505|solute carrier family 34 (sodium phosphate), member 1
mm9_v1_chr11_+_105829364_105829480	9.87023	HNF4A_NR2F1,2.p2	BC083109|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chrX_-_16394443_16394525	9.86497	HNF4A_NR2F1,2.p2	AK031833|Maob|109731|monoamine oxidase B	BC113182|Maob|109731|monoamine oxidase B	BC113788|Maob|109731|monoamine oxidase B	AK054050|Maob|109731|monoamine oxidase B	NM_172778|Maob|109731|monoamine oxidase B
mm9_v1_chr1_+_120524521_120524530	9.80721	HNF4A_NR2F1,2.p2	AK007654|Tcfcp2l1|81879|transcription factor CP2-like 1	NM_023755|Tcfcp2l1|81879|transcription factor CP2-like 1	AK143960|Tcfcp2l1|81879|transcription factor CP2-like 1	AF311309|Tcfcp2l1|81879|transcription factor CP2-like 1	BC116663|Tcfcp2l1|81879|transcription factor CP2-like 1
mm9_v1_chr7_-_29383180_29383213	9.78681	HNF4A_NR2F1,2.p2	AK129298|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4	NM_027470|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr4_-_61748264_61748345	9.75681	HNF4A_NR2F1,2.p2	EU882235|Mup3|17842|major urinary protein 3	M27608|Mup3|17842|major urinary protein 3	X03525|Mup3|17842|major urinary protein 3	BC019965|Mup3|17842|major urinary protein 3	BC106100|Mup3|17842|major urinary protein 3	BC059102|Mup3|17842|major urinary protein 3	NM_001039544|Mup3|17842|major urinary protein 3
mm9_v1_chr1_-_157626552_157626641	9.75546	HNF4A_NR2F1,2.p2	AK171601|Qsox1|104009|quiescin Q6 sulfhydryl oxidase 1
mm9_v1_chr19_-_10678747_10678824	9.72298	HNF4A_NR2F1,2.p2	BC021917|Dak|225913|dihydroxyacetone kinase 2 homolog (yeast)	NM_145496|Dak|225913|dihydroxyacetone kinase 2 homolog (yeast)
mm9_v1_chr3_+_135488617_135488753	9.71817	HNF4A_NR2F1,2.p2	AK085740|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135149|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8	NM_001135150|Slc39a8|67547|solute carrier family 39 (metal ion transporter), member 8
mm9_v1_chr19_+_40066913_40066929	9.64079	HNF4A_NR2F1,2.p2	AK005017|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	NM_010001|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	BC057912|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	AF047542|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37
mm9_v1_chr10_-_75236102_75236123	9.62625	HNF4A_NR2F1,2.p2	BC010753|Ddt|13202|D-dopachrome tautomerase	NM_010027|Ddt|13202|D-dopachrome tautomerase
mm9_v1_chr11_+_83664370_83664376	9.57149	HNF4A_NR2F1,2.p2	AK004837|Hnf1b|21410|HNF1 homeobox B	NM_009330|Hnf1b|21410|HNF1 homeobox B
mm9_v1_chr4_+_141302589_141302623	9.48407	HNF4A_NR2F1,2.p2	NM_001081408|Agmat|75986|agmatine ureohydrolase (agmatinase)
mm9_v1_chr8_-_74035667_74035683	9.44591	HNF4A_NR2F1,2.p2	NM_032398|Plvap|84094|plasmalemma vesicle associated protein
mm9_v1_chr17_-_33084274_33084351	9.44338	HNF4A_NR2F1,2.p2	AF233643|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	NM_130882|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	BC003954|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	BC058330|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13	AK085008|Cyp4f13|170716|cytochrome P450, family 4, subfamily f, polypeptide 13
mm9_v1_chr4_-_137882142_137882214	9.4263	HNF4A_NR2F1,2.p2	AB053476|Pink1|68943|PTEN induced putative kinase 1	BC069968|Pink1|68943|PTEN induced putative kinase 1	AK220318|Pink1|68943|PTEN induced putative kinase 1	BC018594|Pink1|68943|PTEN induced putative kinase 1	BC067066|Pink1|68943|PTEN induced putative kinase 1	AF316872|Pink1|68943|PTEN induced putative kinase 1	AK050322|Pink1|68943|PTEN induced putative kinase 1	AK165480|Pink1|68943|PTEN induced putative kinase 1	AK155474|Pink1|68943|PTEN induced putative kinase 1	NM_026880|Pink1|68943|PTEN induced putative kinase 1
mm9_v1_chrX_+_10062237_10062294	9.42253	HNF4A_NR2F1,2.p2	NM_019634|Tspan7|21912|tetraspanin 7	AK195558|Tspan7|21912|tetraspanin 7	AK147306|Tspan7|21912|tetraspanin 7	AK147404|Tspan7|21912|tetraspanin 7	AK004776|Tspan7|21912|tetraspanin 7	BC058603|Tspan7|21912|tetraspanin 7	AF052492|Tspan7|21912|tetraspanin 7	BC050153|Tspan7|21912|tetraspanin 7	D26483|Tspan7|21912|tetraspanin 7
mm9_v1_chr1_+_141398282_141398309	9.39016	HNF4A_NR2F1,2.p2	NM_031164|F13b|14060|coagulation factor XIII, beta subunit	AK149397|F13b|14060|coagulation factor XIII, beta subunit	D10071|F13b|14060|coagulation factor XIII, beta subunit	BC030166|F13b|14060|coagulation factor XIII, beta subunit
mm9_v1_chr19_+_7131325_7131532	9.3308	HNF4A_NR2F1,2.p2	BC008653|Macrod1|107227|MACRO domain containing 1
mm9_v1_chr10_-_127325698_127325715	9.32933	HNF4A_NR2F1,2.p2	BC093514|Rdh7|54150|retinol dehydrogenase 7	BC092255|Rdh7|54150|retinol dehydrogenase 7
mm9_v1_chr18_+_60963495_60963509	9.31578	HNF4A_NR2F1,2.p2	AK002232|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	AK020607|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_001042605|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_010545|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC003476|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC096435|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	X07129|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm9_v1_chr13_-_35055651_35055680	9.28369	HNF4A_NR2F1,2.p2	BC014724|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	AK007578|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	AK131590|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene	NM_026947|1810022C23Rik|69123|RIKEN cDNA 1810022C23 gene
mm9_v1_chr7_+_130605807_130605885	9.27755	HNF4A_NR2F1,2.p2	NM_001109045|Aqp8|11833|aquaporin 8	NM_007474|Aqp8|11833|aquaporin 8	AF018952|Aqp8|11833|aquaporin 8	BC010982|Aqp8|11833|aquaporin 8
mm9_v1_chr7_+_148021390_148021397	9.27722	HNF4A_NR2F1,2.p2	AK013117|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene	NM_029821|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr15_-_75950624_75950768	9.27226	HNF4A_NR2F1,2.p2	AY312170|Eppk1|223650|epiplakin 1	NM_144848|Eppk1|223650|epiplakin 1	BC090394|BC024139|271278|cDNA sequence BC024139
mm9_v1_chr17_-_28697643_28697658	9.24629	HNF4A_NR2F1,2.p2	BC042935|Clps|109791|colipase, pancreatic	AF414676|Clps|109791|colipase, pancreatic	AF414677|Clps|109791|colipase, pancreatic	AK028141|Clps|109791|colipase, pancreatic	AK008635|Clps|109791|colipase, pancreatic	AK008834|Clps|109791|colipase, pancreatic	AK008839|Clps|109791|colipase, pancreatic	AK008874|Clps|109791|colipase, pancreatic	AK008879|Clps|109791|colipase, pancreatic	AK019005|Clps|109791|colipase, pancreatic	AK019047|Clps|109791|colipase, pancreatic	AK008815|Clps|109791|colipase, pancreatic	NM_025469|Clps|109791|colipase, pancreatic
mm9_v1_chr5_+_114615526_114615586	9.22441	HNF4A_NR2F1,2.p2	AY451394|Acacb|100705|acetyl-Coenzyme A carboxylase beta	NM_133904|Acacb|100705|acetyl-Coenzyme A carboxylase beta	AF290178|Acacb|100705|acetyl-Coenzyme A carboxylase beta
mm9_v1_chr3_+_116215963_116215996	9.21158	HNF4A_NR2F1,2.p2	AK165959|Dbt|13171|dihydrolipoamide branched chain transacylase E2	NM_010022|Dbt|13171|dihydrolipoamide branched chain transacylase E2
mm9_v1_chr14_-_66627993_66628046	9.18479	HNF4A_NR2F1,2.p2	BC019856|Gulo|268756|gulonolactone (L-) oxidase	BC028822|Gulo|268756|gulonolactone (L-) oxidase	BC028828|Gulo|268756|gulonolactone (L-) oxidase	AK167460|Gulo|268756|gulonolactone (L-) oxidase	AK077740|Gulo|268756|gulonolactone (L-) oxidase	NM_178747|Gulo|268756|gulonolactone (L-) oxidase
mm9_v1_chr7_+_27814096_27814122	9.17311	HNF4A_NR2F1,2.p2	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr8_-_74035629_74035657	9.15647	HNF4A_NR2F1,2.p2	AF348403|Plvap|84094|plasmalemma vesicle associated protein	AF369900|Plvap|84094|plasmalemma vesicle associated protein
mm9_v1_chr1_+_74438416_74438473	9.14656	HNF4A_NR2F1,2.p2	AK167390|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC065158|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC079638|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr16_+_22892112_22892117	9.12385	HNF4A_NR2F1,2.p2	NM_013465|Ahsg|11625|alpha-2-HS-glycoprotein	AK149474|Ahsg|11625|alpha-2-HS-glycoprotein	AK149479|Ahsg|11625|alpha-2-HS-glycoprotein	AK167709|Ahsg|11625|alpha-2-HS-glycoprotein	AK133523|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr4_-_43669315_43669362	9.11384	HNF4A_NR2F1,2.p2	AK004497|Hint2|68917|histidine triad nucleotide binding protein 2	BC086940|Hint2|68917|histidine triad nucleotide binding protein 2	NM_026871|Hint2|68917|histidine triad nucleotide binding protein 2	AK170135|Hint2|68917|histidine triad nucleotide binding protein 2	AF356874|Hint2|68917|histidine triad nucleotide binding protein 2
mm9_v1_chr16_+_22892125_22892139	9.09056	HNF4A_NR2F1,2.p2	BC012678|Ahsg|11625|alpha-2-HS-glycoprotein	S96534|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr2_-_168567422_168567434	9.07983	HNF4A_NR2F1,2.p2	BC075718|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chr11_+_101443529_101443628	9.06102	HNF4A_NR2F1,2.p2	AK146019|Tmem106a|217203|transmembrane protein 106A	NM_144830|Tmem106a|217203|transmembrane protein 106A	AK154217|Tmem106a|217203|transmembrane protein 106A	AK150285|Tmem106a|217203|transmembrane protein 106A	AK152741|Tmem106a|217203|transmembrane protein 106A	AK151842|Tmem106a|217203|transmembrane protein 106A	BC033268|Tmem106a|217203|transmembrane protein 106A	AK170900|Tmem106a|217203|transmembrane protein 106A	AK172282|Tmem106a|217203|transmembrane protein 106A	AK149650|Tmem106a|217203|transmembrane protein 106A	AK168437|Tmem106a|217203|transmembrane protein 106A	AK169081|Tmem106a|217203|transmembrane protein 106A
mm9_v1_chr1_-_169323901_169323998	9.01104	HNF4A_NR2F1,2.p2	AK135742|Mgst3|66447|microsomal glutathione S-transferase 3	AK003309|Mgst3|66447|microsomal glutathione S-transferase 3	AK008533|Mgst3|66447|microsomal glutathione S-transferase 3	AK003476|Mgst3|66447|microsomal glutathione S-transferase 3	AK003492|Mgst3|66447|microsomal glutathione S-transferase 3	AK003246|Mgst3|66447|microsomal glutathione S-transferase 3	NM_025569|Mgst3|66447|microsomal glutathione S-transferase 3
mm9_v1_chr4_+_40867085_40867088	9.00097	HNF4A_NR2F1,2.p2	BC117048|Spink4|20731|serine peptidase inhibitor, Kazal type 4	BC117050|Spink4|20731|serine peptidase inhibitor, Kazal type 4	NM_011463|Spink4|20731|serine peptidase inhibitor, Kazal type 4
mm9_v1_chr3_+_95087190_95087293	8.98067	HNF4A_NR2F1,2.p2	
mm9_v1_chr9_+_107479326_107479334	8.96125	HNF4A_NR2F1,2.p2	AF422176|Hyal1|15586|hyaluronoglucosaminidase 1
mm9_v1_chr7_+_36234110_36234197	8.95031	HNF4A_NR2F1,2.p2	AF192310|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_001199015|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AK142541|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_001199016|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AK164714|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	BC010746|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AJ249198|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_021291|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
mm9_v1_chr4_-_141173938_141173956	8.92888	HNF4A_NR2F1,2.p2	BC025833|Tmem82|213989|transmembrane protein 82
mm9_v1_chr4_-_141173895_141173934	8.87668	HNF4A_NR2F1,2.p2	AK162322|Tmem82|213989|transmembrane protein 82	AK154809|Tmem82|213989|transmembrane protein 82
mm9_v1_chr10_+_57514349_57514589	8.87662	HNF4A_NR2F1,2.p2	NM_020561|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	Y08135|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK002455|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK152282|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139288|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139289|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK151683|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A
mm9_v1_chr1_-_134036041_134036303	8.87257	HNF4A_NR2F1,2.p2	AK171569|Cdk18|18557|cyclin-dependent kinase 18	BC119617|Cdk18|18557|cyclin-dependent kinase 18	BC119618|Cdk18|18557|cyclin-dependent kinase 18	AK004998|Cdk18|18557|cyclin-dependent kinase 18	X69026|Cdk18|18557|cyclin-dependent kinase 18	NM_008795|Cdk18|18557|cyclin-dependent kinase 18
mm9_v1_chr13_-_94407548_94407555	8.8027	HNF4A_NR2F1,2.p2	AK145668|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr2_+_58998885_58998932	8.78948	HNF4A_NR2F1,2.p2	AK146720|Pkp4|227937|plakophilin 4	NM_026361|Pkp4|227937|plakophilin 4	NM_175464|Pkp4|227937|plakophilin 4
mm9_v1_chr15_-_75920355_75920542	8.78069	HNF4A_NR2F1,2.p2	BC011468|Nrbp2|223649|nuclear receptor binding protein 2	BC012437|Nrbp2|223649|nuclear receptor binding protein 2	NM_144847|Nrbp2|223649|nuclear receptor binding protein 2
mm9_v1_chr16_+_62854129_62854197	8.70853	HNF4A_NR2F1,2.p2	AK163032|Pros1|19128|protein S (alpha)	AK145501|Pros1|19128|protein S (alpha)	NM_011173|Pros1|19128|protein S (alpha)	Z25469|Pros1|19128|protein S (alpha)	BC128316|Pros1|19128|protein S (alpha)
mm9_v1_chr11_-_61191548_61191595	8.67344	HNF4A_NR2F1,2.p2	BC031436|Slc47a1|67473|solute carrier family 47, member 1	AK004994|Slc47a1|67473|solute carrier family 47, member 1	NM_026183|Slc47a1|67473|solute carrier family 47, member 1
mm9_v1_chr7_-_13583494_13583549	8.63251	HNF4A_NR2F1,2.p2	BC013272|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	BC013335|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AJ223959|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	AK144301|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5	NM_009512|Slc27a5|26459|solute carrier family 27 (fatty acid transporter), member 5
mm9_v1_chr6_+_17290478_17290486	8.61584	HNF4A_NR2F1,2.p2	AK010839|Cav1|12389|caveolin 1, caveolae protein
mm9_v1_chr4_-_136965705_136965705	8.61355	HNF4A_NR2F1,2.p2	NM_001126318|Gm13011|242711|predicted gene 13011
mm9_v1_chr11_+_98912766_98913266	8.60768	HNF4A_NR2F1,2.p2	AK197851|Igfbp4|16010|insulin-like growth factor binding protein 4	AK198090|Igfbp4|16010|insulin-like growth factor binding protein 4	AK200553|Igfbp4|16010|insulin-like growth factor binding protein 4	AK200478|Igfbp4|16010|insulin-like growth factor binding protein 4	AK003243|Igfbp4|16010|insulin-like growth factor binding protein 4	S80566|Igfbp4|16010|insulin-like growth factor binding protein 4	AK192700|Igfbp4|16010|insulin-like growth factor binding protein 4	AK188474|Igfbp4|16010|insulin-like growth factor binding protein 4
mm9_v1_chr19_-_55177562_55177604	8.60265	HNF4A_NR2F1,2.p2	AK047295|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial	AK173202|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr6_+_124959207_124959358	8.59621	HNF4A_NR2F1,2.p2	AK156026|Zfp384|269800|zinc finger protein 384	AK172476|Zfp384|269800|zinc finger protein 384
mm9_v1_chr9_+_103966032_103966080	8.56766	HNF4A_NR2F1,2.p2	AK077531|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	NM_175324|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	AK145561|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	AK128998|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	AK145834|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11	BC045199|Acad11|102632|acyl-Coenzyme A dehydrogenase family, member 11
mm9_v1_chr8_+_87514471_87514552	8.55757	HNF4A_NR2F1,2.p2	NM_001167991|Hook2|170833|hook homolog 2 (Drosophila)	NM_133255|Hook2|170833|hook homolog 2 (Drosophila)	AK030599|Hook2|170833|hook homolog 2 (Drosophila)	AK136069|Hook2|170833|hook homolog 2 (Drosophila)	AK042048|Hook2|170833|hook homolog 2 (Drosophila)	AK166954|Hook2|170833|hook homolog 2 (Drosophila)	BC080744|Hook2|170833|hook homolog 2 (Drosophila)	BC019486|Hook2|170833|hook homolog 2 (Drosophila)	AK145768|Hook2|170833|hook homolog 2 (Drosophila)	AK169073|Hook2|170833|hook homolog 2 (Drosophila)	AK161612|Hook2|170833|hook homolog 2 (Drosophila)	BC055881|Hook2|170833|hook homolog 2 (Drosophila)	BC029967|Hook2|170833|hook homolog 2 (Drosophila)
mm9_v1_chr1_-_164828842_164828859	8.55603	HNF4A_NR2F1,2.p2	BC031415|Fmo2|55990|flavin containing monooxygenase 2	NM_018881|Fmo2|55990|flavin containing monooxygenase 2
mm9_v1_chr9_-_57531425_57531441	8.54194	HNF4A_NR2F1,2.p2	X04283|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	BC018298|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2
mm9_v1_chr4_-_149377238_149377303	8.5293	HNF4A_NR2F1,2.p2	BC042677|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	AK159373|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	AK172249|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm9_v1_chr11_+_69446453_69446577	8.49908	HNF4A_NR2F1,2.p2	AK172042|Fxr2|23879|fragile X mental retardation, autosomal homolog 2	BC062971|Fxr2|23879|fragile X mental retardation, autosomal homolog 2	NM_011814|Fxr2|23879|fragile X mental retardation, autosomal homolog 2	AK154243|Fxr2|23879|fragile X mental retardation, autosomal homolog 2	BC057007|Fxr2|23879|fragile X mental retardation, autosomal homolog 2
mm9_v1_chr3_-_89083562_89083576	8.46411	HNF4A_NR2F1,2.p2	AK009144|Efna1|13636|ephrin A1	NM_010107|Efna1|13636|ephrin A1
mm9_v1_chr15_-_75839859_75839950	8.45183	HNF4A_NR2F1,2.p2	AK030392|Fam83h|105732|family with sequence similarity 83, member H	NM_001168253|Fam83h|105732|family with sequence similarity 83, member H
mm9_v1_chr2_-_64860728_64860875	8.4465	HNF4A_NR2F1,2.p2	BC138581|Grb14|50915|growth factor receptor bound protein 14	BC145913|Grb14|50915|growth factor receptor bound protein 14	AF155647|Grb14|50915|growth factor receptor bound protein 14	NM_016719|Grb14|50915|growth factor receptor bound protein 14	AK147041|Grb14|50915|growth factor receptor bound protein 14	AK010849|Grb14|50915|growth factor receptor bound protein 14	AK010903|Grb14|50915|growth factor receptor bound protein 14
mm9_v1_chr3_+_138078450_138078473	8.44187	HNF4A_NR2F1,2.p2	AK132994|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	NM_011996|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	AJ245750|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100729|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100736|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide	BC100730|Adh4|26876|alcohol dehydrogenase 4 (class II), pi polypeptide
mm9_v1_chr7_-_31900188_31900326	8.37738	HNF4A_NR2F1,2.p2	BC138809|Hpn|15451|hepsin	BC145413|Hpn|15451|hepsin	AF030065|Hpn|15451|hepsin	AY234104|Hpn|15451|hepsin	AK002694|Hpn|15451|hepsin	NM_001110252|Hpn|15451|hepsin	NM_008281|Hpn|15451|hepsin
mm9_v1_chr19_+_46673553_46673665	8.35885	HNF4A_NR2F1,2.p2	NM_001177812|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	NM_146099|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK087487|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	BC026369|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK154686|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	AK169294|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed	BC058949|D19Wsu162e|226178|DNA segment, Chr 19, Wayne State University 162, expressed
mm9_v1_chr17_-_24787217_24787278	8.35453	HNF4A_NR2F1,2.p2	AB026489|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	BC070458|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK169007|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK170057|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK039491|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK004710|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK075800|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK075813|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK084801|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_023055|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm9_v1_chr11_+_75281563_75281593	8.34517	HNF4A_NR2F1,2.p2	BC021945|Tlcd2|380712|TLC domain containing 2	NM_027249|Tlcd2|380712|TLC domain containing 2	AK008522|Tlcd2|380712|TLC domain containing 2
mm9_v1_chr1_-_135320788_135320788	8.34419	HNF4A_NR2F1,2.p2	NM_011439|Sox13|20668|SRY-box containing gene 13
mm9_v1_chr1_+_21230664_21230669	8.33581	HNF4A_NR2F1,2.p2	NM_001077353|Gsta3|14859|glutathione S-transferase, alpha 3	NM_010356|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr16_+_23058322_23058435	8.3127	HNF4A_NR2F1,2.p2	NM_001102411|Kng1|16644|kininogen 1	NM_001102412|Kng1|16644|kininogen 1	NM_023125|Kng1|16644|kininogen 1	AK005547|Kng1|16644|kininogen 1	BC108936|Kng1|16644|kininogen 1	BC018158|Kng1|16644|kininogen 1
mm9_v1_chr10_+_69388242_69388279	8.29746	HNF4A_NR2F1,2.p2	L40631|Ank3|11735|ankyrin 3, epithelial	NM_009670|Ank3|11735|ankyrin 3, epithelial	NM_170687|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr6_-_85819124_85819161	8.27487	HNF4A_NR2F1,2.p2	NM_053096|Cml2|93673|camello-like 2	BC039773|Cml2|93673|camello-like 2
mm9_v1_chr8_-_95721702_95721738	8.25212	HNF4A_NR2F1,2.p2	NM_053200|Ces1d|104158|carboxylesterase 1D
mm9_v1_chr16_-_45844343_45844346	8.25121	HNF4A_NR2F1,2.p2	AK049595|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	BC050915|Phldb2|208177|pleckstrin homology-like domain, family B, member 2	BC060683|Phldb2|208177|pleckstrin homology-like domain, family B, member 2
mm9_v1_chr9_-_103118228_103118262	8.23516	HNF4A_NR2F1,2.p2	AK203903|Trf|22041|transferrin
mm9_v1_chr7_+_29619155_29619200	8.23404	HNF4A_NR2F1,2.p2	BC094008|Lgals4|16855|lectin, galactose binding, soluble 4	AF510729|Lgals4|16855|lectin, galactose binding, soluble 4	BC021632|Lgals4|16855|lectin, galactose binding, soluble 4	BC011236|Lgals4|16855|lectin, galactose binding, soluble 4	AF026794|Lgals6|16857|lectin, galactose binding, soluble 6	NM_010707|Lgals6|16857|lectin, galactose binding, soluble 6
mm9_v1_chr2_-_119055557_119055600	8.22552	HNF4A_NR2F1,2.p2	AK008348|Ppp1r14d|72112|protein phosphatase 1, regulatory (inhibitor) subunit 14D	AF408400|Ppp1r14d|72112|protein phosphatase 1, regulatory (inhibitor) subunit 14D	AY179331|Ppp1r14d|72112|protein phosphatase 1, regulatory (inhibitor) subunit 14D	BC024547|Ppp1r14d|72112|protein phosphatase 1, regulatory (inhibitor) subunit 14D	NM_028104|Ppp1r14d|72112|protein phosphatase 1, regulatory (inhibitor) subunit 14D
mm9_v1_chr19_+_5088593_5088613	8.21935	HNF4A_NR2F1,2.p2	BC011117|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)
mm9_v1_chr10_-_42198085_42198160	8.21742	HNF4A_NR2F1,2.p2	
mm9_v1_chr10_-_75243786_75243866	8.20939	HNF4A_NR2F1,2.p2	BC003903|Gstt3|103140|glutathione S-transferase, theta 3	AK168226|Gstt3|103140|glutathione S-transferase, theta 3	AK138669|Gstt3|103140|glutathione S-transferase, theta 3	AK154161|Gstt3|103140|glutathione S-transferase, theta 3
mm9_v1_chr8_-_114214909_114214915	8.20487	HNF4A_NR2F1,2.p2	AK003060|Ctrb1|66473|chymotrypsinogen B1	AK003079|Ctrb1|66473|chymotrypsinogen B1	AK007566|Ctrb1|66473|chymotrypsinogen B1	AK007765|Ctrb1|66473|chymotrypsinogen B1	AK007815|Ctrb1|66473|chymotrypsinogen B1	AK008644|Ctrb1|66473|chymotrypsinogen B1	AK008729|Ctrb1|66473|chymotrypsinogen B1	AK008888|Ctrb1|66473|chymotrypsinogen B1	AK008927|Ctrb1|66473|chymotrypsinogen B1	AK018554|Ctrb1|66473|chymotrypsinogen B1	BC061083|Ctrb1|66473|chymotrypsinogen B1	NM_025583|Ctrb1|66473|chymotrypsinogen B1
mm9_v1_chr14_+_30822097_30822350	8.19134	HNF4A_NR2F1,2.p2	NM_001136240|Chdh|218865|choline dehydrogenase	AK052715|Chdh|218865|choline dehydrogenase	AK087570|Chdh|218865|choline dehydrogenase	AK164042|Chdh|218865|choline dehydrogenase
mm9_v1_chr16_+_22892156_22892180	8.18053	HNF4A_NR2F1,2.p2	BC019822|Ahsg|11625|alpha-2-HS-glycoprotein
mm9_v1_chr15_+_100135219_100135286	8.10553	HNF4A_NR2F1,2.p2	AK008925|Mettl7a1|70152|methyltransferase like 7A1	AK076169|Mettl7a1|70152|methyltransferase like 7A1	NM_027334|Mettl7a1|70152|methyltransferase like 7A1	BC171988|Mettl7a1|70152|methyltransferase like 7A1	BC171989|Mettl7a1|70152|methyltransferase like 7A1	BC055034|Mettl7a1|70152|methyltransferase like 7A1	BC047149|Mettl7a1|70152|methyltransferase like 7A1	BC060144|Mettl7a1|70152|methyltransferase like 7A1	BC033446|Mettl7a1|70152|methyltransferase like 7A1	AJ536232|Mettl7a1|70152|methyltransferase like 7A1	AB253943|Mettl7a1|70152|methyltransferase like 7A1
mm9_v1_chr10_-_127325668_127325688	8.09005	HNF4A_NR2F1,2.p2	AB032058|Rdh7|54150|retinol dehydrogenase 7
mm9_v1_chr19_-_29095519_29095616	8.02208	HNF4A_NR2F1,2.p2	
mm9_v1_chr6_+_42195911_42195967	7.98315	HNF4A_NR2F1,2.p2	NM_029555|Gstk1|76263|glutathione S-transferase kappa 1	AK002661|Gstk1|76263|glutathione S-transferase kappa 1
mm9_v1_chr17_-_56249206_56249228	7.98056	HNF4A_NR2F1,2.p2	NM_020568|Plin4|57435|perilipin 4	AF064748|Plin4|57435|perilipin 4
mm9_v1_chr3_+_63099408_63099509	7.96611	HNF4A_NR2F1,2.p2	AK076908|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr2_+_35477498_35477550	7.95447	HNF4A_NR2F1,2.p2	AK147593|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001114124|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr4_-_119331384_119331549	7.95127	HNF4A_NR2F1,2.p2	BC024373|Guca2b|14916|guanylate cyclase activator 2b (retina)	U67800|Guca2b|14916|guanylate cyclase activator 2b (retina)	AK002364|Guca2b|14916|guanylate cyclase activator 2b (retina)	NM_008191|Guca2b|14916|guanylate cyclase activator 2b (retina)	U90727|Guca2b|14916|guanylate cyclase activator 2b (retina)
mm9_v1_chr19_-_3912772_3912783	7.94541	HNF4A_NR2F1,2.p2	AK135069|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8
mm9_v1_chr17_-_74242984_74243003	7.91667	HNF4A_NR2F1,2.p2	BC003997|Xdh|22436|xanthine dehydrogenase
mm9_v1_chr19_+_6241665_6241742	7.9101	HNF4A_NR2F1,2.p2	NM_194348|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	BC063264|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	AK129132|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)
mm9_v1_chr5_-_87997908_87998005	7.88766	HNF4A_NR2F1,2.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr3_-_144695718_144695741	7.83566	HNF4A_NR2F1,2.p2	BC028343|Clca3|23844|chloride channel calcium activated 3	AB017156|Clca3|23844|chloride channel calcium activated 3	BC116318|Clca3|23844|chloride channel calcium activated 3	BC116319|Clca3|23844|chloride channel calcium activated 3	AK007466|Clca3|23844|chloride channel calcium activated 3	AK008659|Clca3|23844|chloride channel calcium activated 3	AK136476|Clca3|23844|chloride channel calcium activated 3	AK033560|Clca3|23844|chloride channel calcium activated 3	NM_017474|Clca3|23844|chloride channel calcium activated 3
mm9_v1_chr19_-_5845001_5845012	7.81133	HNF4A_NR2F1,2.p2	BC025215|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr15_+_10288309_10288333	7.78858	HNF4A_NR2F1,2.p2	BC141248|Agxt2|268782|alanine-glyoxylate aminotransferase 2	BC145576|Agxt2|268782|alanine-glyoxylate aminotransferase 2	AK149538|Agxt2|268782|alanine-glyoxylate aminotransferase 2	NM_001031851|Agxt2|268782|alanine-glyoxylate aminotransferase 2
mm9_v1_chr6_+_43215604_43215702	7.77121	HNF4A_NR2F1,2.p2	NM_133674|Arhgef5|54324|Rho guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr15_-_96829997_96830015	7.74379	HNF4A_NR2F1,2.p2	AK005887|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chr16_+_37580303_37580398	7.73471	HNF4A_NR2F1,2.p2	BC024369|Hgd|15233|homogentisate 1, 2-dioxygenase	BC037628|Hgd|15233|homogentisate 1, 2-dioxygenase	AK050193|Hgd|15233|homogentisate 1, 2-dioxygenase	BC044758|Hgd|15233|homogentisate 1, 2-dioxygenase	AK002584|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr19_+_5088537_5088585	7.71607	HNF4A_NR2F1,2.p2	AK011071|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK077329|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	NM_026553|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)	AK160409|Yif1a|68090|Yip1 interacting factor homolog A (S. cerevisiae)
mm9_v1_chr2_+_92215395_92215518	7.68403	HNF4A_NR2F1,2.p2	AK143073|Pex16|18633|peroxisomal biogenesis factor 16	NM_145122|Pex16|18633|peroxisomal biogenesis factor 16
mm9_v1_chr2_+_173603706_173603746	7.66731	HNF4A_NR2F1,2.p2	BC024562|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK205322|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK182293|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr9_+_120864938_120864992	7.60361	HNF4A_NR2F1,2.p2	AK219273|Ctnnb1|12387|catenin (cadherin associated protein), beta 1
mm9_v1_chr4_-_137882005_137882036	7.58761	HNF4A_NR2F1,2.p2	BC018561|Pink1|68943|PTEN induced putative kinase 1
mm9_v1_chr17_-_26158762_26158804	7.57845	HNF4A_NR2F1,2.p2	AK052775|Rab11fip3|215445|RAB11 family interacting protein 3 (class II)	BC023364|Rab11fip3|215445|RAB11 family interacting protein 3 (class II)	AK085516|Rab11fip3|215445|RAB11 family interacting protein 3 (class II)	AK128985|Rab11fip3|215445|RAB11 family interacting protein 3 (class II)	NM_153140|Rab11fip3|215445|RAB11 family interacting protein 3 (class II)
mm9_v1_chr8_+_62984911_62984927	7.56321	HNF4A_NR2F1,2.p2	AK075578|Aadat|23923|aminoadipate aminotransferase	AF072376|Aadat|23923|aminoadipate aminotransferase	NM_011834|Aadat|23923|aminoadipate aminotransferase	BC012637|Aadat|23923|aminoadipate aminotransferase
mm9_v1_chr7_-_106501642_106501748	7.51696	HNF4A_NR2F1,2.p2	AK077937|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	NM_001111043|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	NM_001111044|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	NM_009825|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm9_v1_chr4_-_136986432_136986438	7.50386	HNF4A_NR2F1,2.p2	AK008858|Cela3b|67868|chymotrypsin-like elastase family, member 3B	AK009129|Cela3b|67868|chymotrypsin-like elastase family, member 3B	AK010149|Cela3b|67868|chymotrypsin-like elastase family, member 3B	BC061066|Cela3b|67868|chymotrypsin-like elastase family, member 3B	NM_026419|Cela3b|67868|chymotrypsin-like elastase family, member 3B
mm9_v1_chr2_+_173935819_173935978	7.4971	HNF4A_NR2F1,2.p2	AK150313|Npepl1|228961|aminopeptidase-like 1	AK170509|Npepl1|228961|aminopeptidase-like 1	NM_213733|Npepl1|228961|aminopeptidase-like 1	AK156136|Npepl1|228961|aminopeptidase-like 1	BC069933|Npepl1|228961|aminopeptidase-like 1	AK144651|Npepl1|228961|aminopeptidase-like 1	BC080707|Npepl1|228961|aminopeptidase-like 1
mm9_v1_chr19_+_38470458_38470592	7.49382	HNF4A_NR2F1,2.p2	BC137663|Tmem20|240660|transmembrane protein 20	BC137664|Tmem20|240660|transmembrane protein 20	AK041618|Tmem20|240660|transmembrane protein 20	NM_175507|Tmem20|240660|transmembrane protein 20	AK030517|Tmem20|240660|transmembrane protein 20	AK171987|Tmem20|240660|transmembrane protein 20	AK052365|Tmem20|240660|transmembrane protein 20
mm9_v1_chr3_+_63100128_63100144	7.44764	HNF4A_NR2F1,2.p2	AK040730|Mme|17380|membrane metallo endopeptidase	AK080202|Mme|17380|membrane metallo endopeptidase	BC034092|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr13_-_101322557_101322594	7.44686	HNF4A_NR2F1,2.p2	AK033532|Ocln|18260|occludin	AK019880|Ocln|18260|occludin	AK145798|Ocln|18260|occludin
mm9_v1_chrX_+_57252630_57252647	7.44132	HNF4A_NR2F1,2.p2	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr11_+_75323840_75323968	7.43987	HNF4A_NR2F1,2.p2	AK160517|Rilp|280408|Rab interacting lysosomal protein
mm9_v1_chr6_-_85819035_85819112	7.43582	HNF4A_NR2F1,2.p2	AK050449|Cml2|93673|camello-like 2	AF163315|Cml2|93673|camello-like 2
mm9_v1_chr6_-_95668770_95668830	7.40535	HNF4A_NR2F1,2.p2	BC080781|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK045176|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK042987|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK156263|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK167136|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK172363|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK172561|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	AK172633|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit	NM_011507|Suclg2|20917|succinate-Coenzyme A ligase, GDP-forming, beta subunit
mm9_v1_chr2_+_24935818_24936028	7.36369	HNF4A_NR2F1,2.p2	BC031143|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	NM_028093|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AY364442|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8	AK008590|Entpd8|72090|ectonucleoside triphosphate diphosphohydrolase 8
mm9_v1_chr4_+_139192872_139192966	7.3456	HNF4A_NR2F1,2.p2	BC026589|Aldh4a1|212647|aldehyde dehydrogenase 4 family, member A1
mm9_v1_chr13_-_101322416_101322452	7.33106	HNF4A_NR2F1,2.p2	BC138679|Ocln|18260|occludin	BC138680|Ocln|18260|occludin	BC145371|Ocln|18260|occludin	AK042576|Ocln|18260|occludin	NM_008756|Ocln|18260|occludin
mm9_v1_chr9_+_66006025_66006053	7.27823	HNF4A_NR2F1,2.p2	NM_010019|Dapk2|13143|death-associated protein kinase 2	AK158082|Dapk2|13143|death-associated protein kinase 2	AB018002|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr19_-_34821529_34821600	7.2766	HNF4A_NR2F1,2.p2	AK028284|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	AK029076|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12	NM_172838|Slc16a12|240638|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm9_v1_chr2_+_92215590_92215711	7.26488	HNF4A_NR2F1,2.p2	BC010822|Pex16|18633|peroxisomal biogenesis factor 16
mm9_v1_chr10_-_42198203_42198370	7.25634	HNF4A_NR2F1,2.p2	AF520417|Lace1|215951|lactation elevated 1	AK170996|Lace1|215951|lactation elevated 1	BC089595|Lace1|215951|lactation elevated 1	AK044595|Lace1|215951|lactation elevated 1	NM_145743|Lace1|215951|lactation elevated 1
mm9_v1_chr19_-_4498559_4498610	7.21167	HNF4A_NR2F1,2.p2	AK008072|2010003K11Rik|69861|RIKEN cDNA 2010003K11 gene	BC021951|2010003K11Rik|69861|RIKEN cDNA 2010003K11 gene	NM_027237|2010003K11Rik|69861|RIKEN cDNA 2010003K11 gene
mm9_v1_chr8_-_74225669_74225702	7.19906	HNF4A_NR2F1,2.p2	AK144180|B3gnt3|72297|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3	AK144117|B3gnt3|72297|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3	BC026418|B3gnt3|72297|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3	NM_028189|B3gnt3|72297|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
mm9_v1_chr6_-_52590192_52590282	7.16461	HNF4A_NR2F1,2.p2	AK078175|Hibadh|58875|3-hydroxyisobutyrate dehydrogenase
mm9_v1_chr1_-_92866005_92866196	7.1553	HNF4A_NR2F1,2.p2	BC013170|Rab17|19329|RAB17, member RAS oncogene family	BC051071|Rab17|19329|RAB17, member RAS oncogene family	AK075591|Rab17|19329|RAB17, member RAS oncogene family	NM_008998|Rab17|19329|RAB17, member RAS oncogene family
mm9_v1_chr3_+_88940063_88940079	7.14895	HNF4A_NR2F1,2.p2	D63764|Pklr|18770|pyruvate kinase liver and red blood cell	NM_013631|Pklr|18770|pyruvate kinase liver and red blood cell	S79731|Pklr|18770|pyruvate kinase liver and red blood cell	BC152327|Pklr|18770|pyruvate kinase liver and red blood cell	BC152542|Pklr|18770|pyruvate kinase liver and red blood cell
mm9_v1_chr19_+_46227039_46227050	7.14473	HNF4A_NR2F1,2.p2	BC076569|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	NM_178930|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr7_+_31337558_31337578	7.13245	HNF4A_NR2F1,2.p2	BC051228|Hspb6|243912|heat shock protein, alpha-crystallin-related, B6
mm9_v1_chr12_-_86715612_86715842	7.08576	HNF4A_NR2F1,2.p2	AK150605|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152656|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC064755|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC085097|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK003676|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK084117|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152643|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	NM_026775|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr1_+_166726827_166726862	7.08507	HNF4A_NR2F1,2.p2	BC046420|Dpt|56429|dermatopontin	AF143374|Dpt|56429|dermatopontin	NM_019759|Dpt|56429|dermatopontin
mm9_v1_chr17_+_26250190_26250324	7.07751	HNF4A_NR2F1,2.p2	AK044384|Tmem8|60455|transmembrane protein 8 (five membrane-spanning domains)	NM_021793|Tmem8|60455|transmembrane protein 8 (five membrane-spanning domains)	AB045293|Tmem8|60455|transmembrane protein 8 (five membrane-spanning domains)
mm9_v1_chr17_-_56429892_56429938	7.07743	HNF4A_NR2F1,2.p2	DQ257436|Plin3|66905|perilipin 3	BC011116|Plin3|66905|perilipin 3	AK050140|Plin3|66905|perilipin 3	AK167214|Plin3|66905|perilipin 3	AK004970|Plin3|66905|perilipin 3	AK012517|Plin3|66905|perilipin 3	AK049537|Plin3|66905|perilipin 3	AK132313|Plin3|66905|perilipin 3	NM_025836|Plin3|66905|perilipin 3
mm9_v1_chr12_+_114378688_114378782	7.05391	HNF4A_NR2F1,2.p2	AF469648|Crip2|68337|cysteine rich protein 2	BC002093|Crip2|68337|cysteine rich protein 2	AK002484|Crip2|68337|cysteine rich protein 2	BC002096|Crip2|68337|cysteine rich protein 2	BC007149|Crip2|68337|cysteine rich protein 2	CT010309|Crip2|68337|cysteine rich protein 2
mm9_v1_chr9_-_108208272_108208302	7.04275	HNF4A_NR2F1,2.p2	BC019397|Tcta|102791|T-cell leukemia translocation altered gene	NM_133986|Tcta|102791|T-cell leukemia translocation altered gene
mm9_v1_chr8_+_71404491_71404740	7.02191	HNF4A_NR2F1,2.p2	M65258|Lpl|16956|lipoprotein lipase	AK002645|Lpl|16956|lipoprotein lipase	AK151369|Lpl|16956|lipoprotein lipase	AK151434|Lpl|16956|lipoprotein lipase	AK151521|Lpl|16956|lipoprotein lipase	AK150672|Lpl|16956|lipoprotein lipase	AK089473|Lpl|16956|lipoprotein lipase	AK151038|Lpl|16956|lipoprotein lipase	AK151195|Lpl|16956|lipoprotein lipase	AK151630|Lpl|16956|lipoprotein lipase	AK152733|Lpl|16956|lipoprotein lipase	AK151774|Lpl|16956|lipoprotein lipase	AK152400|Lpl|16956|lipoprotein lipase	AK150457|Lpl|16956|lipoprotein lipase	AK151893|Lpl|16956|lipoprotein lipase	AK045064|Lpl|16956|lipoprotein lipase	AK079446|Lpl|16956|lipoprotein lipase	AK151540|Lpl|16956|lipoprotein lipase	AK151801|Lpl|16956|lipoprotein lipase	AK151828|Lpl|16956|lipoprotein lipase	AK152053|Lpl|16956|lipoprotein lipase	AK152390|Lpl|16956|lipoprotein lipase	BC158040|Lpl|16956|lipoprotein lipase	AK170106|Lpl|16956|lipoprotein lipase	AK086023|Lpl|16956|lipoprotein lipase	CT010344|Lpl|16956|lipoprotein lipase	J03302|Lpl|16956|lipoprotein lipase
mm9_v1_chr13_-_101322672_101322676	7.00066	HNF4A_NR2F1,2.p2	U49185|Ocln|18260|occludin
mm9_v1_chr10_+_79285371_79285403	6.98303	HNF4A_NR2F1,2.p2	AK147132|9130017N09Rik|78906|RIKEN cDNA 9130017N09 gene	AK146817|9130017N09Rik|78906|RIKEN cDNA 9130017N09 gene	AK168406|9130017N09Rik|78906|RIKEN cDNA 9130017N09 gene
mm9_v1_chr2_+_118598504_118598509	6.97666	HNF4A_NR2F1,2.p2	NM_001145644|Phgr1|53906|proline/histidine/glycine-rich 1	AK008311|Phgr1|53906|proline/histidine/glycine-rich 1	AK019007|Phgr1|53906|proline/histidine/glycine-rich 1
mm9_v1_chr2_-_69180643_69180677	6.97434	HNF4A_NR2F1,2.p2	AF133903|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	AK144553|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11	NM_021022|Abcb11|27413|ATP-binding cassette, sub-family B (MDR/TAP), member 11
mm9_v1_chr1_+_173144098_173144105	6.96023	HNF4A_NR2F1,2.p2	AK133515|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	NM_009803|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chrX_+_57252655_57252676	6.93454	HNF4A_NR2F1,2.p2	M23109|F9|14071|coagulation factor IX
mm9_v1_chr2_+_30122064_30122111	6.93046	HNF4A_NR2F1,2.p2	NM_172267|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC132271|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC132273|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC145356|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	BC171925|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr7_-_53285651_53285671	6.88937	HNF4A_NR2F1,2.p2	AB028737|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	BC040400|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109740|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109741|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	NM_018795|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6
mm9_v1_chr17_-_34987137_34987148	6.85775	HNF4A_NR2F1,2.p2	AK029763|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)	AK087810|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)	AK159854|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)	NM_021337|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr1_+_74331503_74331655	6.85572	HNF4A_NR2F1,2.p2	AF318058|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116236|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC116237|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_001039509|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_025580|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC008274|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	BC058945|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK012976|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK173125|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK009545|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY039041|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AY299972|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK166548|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia
mm9_v1_chr7_-_20334872_20334921	6.84865	HNF4A_NR2F1,2.p2	BC059941|Pvrl2|19294|poliovirus receptor-related 2	NM_001159724|Pvrl2|19294|poliovirus receptor-related 2	NM_008990|Pvrl2|19294|poliovirus receptor-related 2
mm9_v1_chr6_-_48791369_48791407	6.84238	HNF4A_NR2F1,2.p2	AK156042|Tmem176b|65963|transmembrane protein 176B	NM_001164207|Tmem176b|65963|transmembrane protein 176B	NM_001164208|Tmem176b|65963|transmembrane protein 176B
mm9_v1_chr4_+_97444450_97444485	6.83957	HNF4A_NR2F1,2.p2	AK054310|Nfia|18027|nuclear factor I/A	AK137731|Nfia|18027|nuclear factor I/A
mm9_v1_chr7_-_29383163_29383177	6.82944	HNF4A_NR2F1,2.p2	BC048238|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr7_+_88358623_88358753	6.82912	HNF4A_NR2F1,2.p2	AF067806|Pde8a|18584|phosphodiesterase 8A	BC125578|Pde8a|18584|phosphodiesterase 8A	BC132145|Pde8a|18584|phosphodiesterase 8A	NM_008803|Pde8a|18584|phosphodiesterase 8A
mm9_v1_chr4_-_62815137_62815208	6.80793	HNF4A_NR2F1,2.p2	X68680|Ambp|11699|alpha 1 microglobulin/bikunin	AK004907|Ambp|11699|alpha 1 microglobulin/bikunin	D28812|Ambp|11699|alpha 1 microglobulin/bikunin	NM_007443|Ambp|11699|alpha 1 microglobulin/bikunin	BC021660|Ambp|11699|alpha 1 microglobulin/bikunin
mm9_v1_chr6_-_52590285_52590317	6.7835	HNF4A_NR2F1,2.p2	BC003914|Hibadh|58875|3-hydroxyisobutyrate dehydrogenase	NM_145567|Hibadh|58875|3-hydroxyisobutyrate dehydrogenase
mm9_v1_chr9_-_57531452_57531467	6.78341	HNF4A_NR2F1,2.p2	BC054827|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	K02589|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	NM_009993|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	X00479|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2
mm9_v1_chr11_+_3931731_3931881	6.78323	HNF4A_NR2F1,2.p2	BC026948|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	NM_146013|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)	AK028954|Sec14l4|103655|SEC14-like 4 (S. cerevisiae)
mm9_v1_chr15_-_74828317_74828336	6.76464	HNF4A_NR2F1,2.p2	BC002070|Ly6a|110454|lymphocyte antigen 6 complex, locus A	NM_010738|Ly6a|110454|lymphocyte antigen 6 complex, locus A	X04653|Ly6a|110454|lymphocyte antigen 6 complex, locus A	J03636|Ly6a|110454|lymphocyte antigen 6 complex, locus A	AK076200|Ly6a|110454|lymphocyte antigen 6 complex, locus A
mm9_v1_chr18_+_70728508_70728589	6.76382	HNF4A_NR2F1,2.p2	AK082825|Mbd2|17191|methyl-CpG binding domain protein 2
mm9_v1_chr18_+_36526187_36526274	6.74179	HNF4A_NR2F1,2.p2	AK003470|0610010O12Rik|66060|RIKEN cDNA 0610010O12 gene
mm9_v1_chr9_-_110892114_110892227	6.73498	HNF4A_NR2F1,2.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr3_+_63099793_63099793	6.7332	HNF4A_NR2F1,2.p2	AK031446|Mme|17380|membrane metallo endopeptidase	NM_008604|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr2_-_104582953_104582979	6.72001	HNF4A_NR2F1,2.p2	BC013499|Depdc7|211896|DEP domain containing 7	NM_144804|Depdc7|211896|DEP domain containing 7	AK144066|Depdc7|211896|DEP domain containing 7	AK165504|Depdc7|211896|DEP domain containing 7	AK134830|Depdc7|211896|DEP domain containing 7	AK162086|Depdc7|211896|DEP domain containing 7	AK162218|Depdc7|211896|DEP domain containing 7
mm9_v1_chr7_-_123174560_123174560	6.7088	HNF4A_NR2F1,2.p2	AK030713|Sox6|20679|SRY-box containing gene 6	NM_001025560|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr7_-_148086341_148086344	6.70259	HNF4A_NR2F1,2.p2	NM_007751|Cox8b|12869|cytochrome c oxidase, subunit VIIIb
mm9_v1_chr17_-_33053945_33054090	6.69533	HNF4A_NR2F1,2.p2	BC094016|Cyp4f14|64385|cytochrome P450, family 4, subfamily f, polypeptide 14	AF233644|Cyp4f14|64385|cytochrome P450, family 4, subfamily f, polypeptide 14	AB037540|Cyp4f14|64385|cytochrome P450, family 4, subfamily f, polypeptide 14	NM_022434|Cyp4f14|64385|cytochrome P450, family 4, subfamily f, polypeptide 14	BC011228|Cyp4f14|64385|cytochrome P450, family 4, subfamily f, polypeptide 14
mm9_v1_chr7_-_28122615_28122636	6.66547	HNF4A_NR2F1,2.p2	NM_175641|Ltbp4|108075|latent transforming growth factor beta binding protein 4	BC141005|Ltbp4|108075|latent transforming growth factor beta binding protein 4
mm9_v1_chr8_+_71404452_71404464	6.64552	HNF4A_NR2F1,2.p2	AK080872|Lpl|16956|lipoprotein lipase	AK150328|Lpl|16956|lipoprotein lipase	AK150488|Lpl|16956|lipoprotein lipase	AK150505|Lpl|16956|lipoprotein lipase	AK150532|Lpl|16956|lipoprotein lipase	AK150577|Lpl|16956|lipoprotein lipase	AK150585|Lpl|16956|lipoprotein lipase	AK150593|Lpl|16956|lipoprotein lipase	AK150691|Lpl|16956|lipoprotein lipase	AK150984|Lpl|16956|lipoprotein lipase	AK150990|Lpl|16956|lipoprotein lipase	AK151006|Lpl|16956|lipoprotein lipase	AK151049|Lpl|16956|lipoprotein lipase	AK151093|Lpl|16956|lipoprotein lipase	AK151099|Lpl|16956|lipoprotein lipase	AK151105|Lpl|16956|lipoprotein lipase	AK151112|Lpl|16956|lipoprotein lipase	AK151216|Lpl|16956|lipoprotein lipase	AK151563|Lpl|16956|lipoprotein lipase	AK151679|Lpl|16956|lipoprotein lipase	AK151698|Lpl|16956|lipoprotein lipase	AK151727|Lpl|16956|lipoprotein lipase	AK151772|Lpl|16956|lipoprotein lipase	AK151866|Lpl|16956|lipoprotein lipase	AK151870|Lpl|16956|lipoprotein lipase	AK151872|Lpl|16956|lipoprotein lipase	AK152014|Lpl|16956|lipoprotein lipase	AK152035|Lpl|16956|lipoprotein lipase	AK152049|Lpl|16956|lipoprotein lipase	AK152079|Lpl|16956|lipoprotein lipase	AK152238|Lpl|16956|lipoprotein lipase	AK152350|Lpl|16956|lipoprotein lipase	AK152657|Lpl|16956|lipoprotein lipase	AK152706|Lpl|16956|lipoprotein lipase	AK152775|Lpl|16956|lipoprotein lipase	AK152869|Lpl|16956|lipoprotein lipase	AK152956|Lpl|16956|lipoprotein lipase	AK153006|Lpl|16956|lipoprotein lipase	AK153148|Lpl|16956|lipoprotein lipase	AK153242|Lpl|16956|lipoprotein lipase	AK153425|Lpl|16956|lipoprotein lipase	AK153428|Lpl|16956|lipoprotein lipase	AK155917|Lpl|16956|lipoprotein lipase	AK159268|Lpl|16956|lipoprotein lipase	NM_008509|Lpl|16956|lipoprotein lipase	AK150355|Lpl|16956|lipoprotein lipase	AK152481|Lpl|16956|lipoprotein lipase	AK170486|Lpl|16956|lipoprotein lipase	AK017272|Lpl|16956|lipoprotein lipase	AK150375|Lpl|16956|lipoprotein lipase	AK150646|Lpl|16956|lipoprotein lipase	AK152251|Lpl|16956|lipoprotein lipase	AK154419|Lpl|16956|lipoprotein lipase	BC003305|Lpl|16956|lipoprotein lipase
mm9_v1_chr11_+_69867893_69867970	6.64522	HNF4A_NR2F1,2.p2	BC022106|Asgr1|11889|asialoglycoprotein receptor 1	U09362|Asgr1|11889|asialoglycoprotein receptor 1	BC014779|Asgr1|11889|asialoglycoprotein receptor 1
mm9_v1_chr1_+_173144142_173144169	6.64031	HNF4A_NR2F1,2.p2	AK149381|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	BC089541|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3	AF009327|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chrX_-_7595584_7595617	6.63198	HNF4A_NR2F1,2.p2	BC061027|Glod5|69824|glyoxalase domain containing 5	AK008008|Glod5|69824|glyoxalase domain containing 5	NM_027227|Glod5|69824|glyoxalase domain containing 5
mm9_v1_chr11_-_78798332_78798435	6.61247	HNF4A_NR2F1,2.p2	U55061|Lgals9|16859|lectin, galactose binding, soluble 9	U55060|Lgals9|16859|lectin, galactose binding, soluble 9	BC003754|Lgals9|16859|lectin, galactose binding, soluble 9	AK146044|Lgals9|16859|lectin, galactose binding, soluble 9	NM_001159301|Lgals9|16859|lectin, galactose binding, soluble 9	NM_010708|Lgals9|16859|lectin, galactose binding, soluble 9
mm9_v1_chr9_+_66006060_66006077	6.61001	HNF4A_NR2F1,2.p2	AK004350|Dapk2|13143|death-associated protein kinase 2	BC022165|Dapk2|13143|death-associated protein kinase 2
mm9_v1_chr1_+_173144116_173144124	6.60689	HNF4A_NR2F1,2.p2	AK149430|Nr1i3|12355|nuclear receptor subfamily 1, group I, member 3
mm9_v1_chr7_+_135667279_135667363	6.57225	HNF4A_NR2F1,2.p2	AK007414|Bag3|29810|BCL2-associated athanogene 3	AK036675|Bag3|29810|BCL2-associated athanogene 3	AK016510|Bag3|29810|BCL2-associated athanogene 3	AF130471|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr3_-_89083465_89083546	6.53608	HNF4A_NR2F1,2.p2	U90662|Efna1|13636|ephrin A1	U26188|Efna1|13636|ephrin A1	BC002046|Efna1|13636|ephrin A1
mm9_v1_chr7_+_148021503_148021519	6.52749	HNF4A_NR2F1,2.p2	DQ225768|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr10_+_18564876_18564915	6.52094	HNF4A_NR2F1,2.p2	AF249870|Perp|64058|PERP, TP53 apoptosis effector	NM_022032|Perp|64058|PERP, TP53 apoptosis effector
mm9_v1_chr17_-_74299469_74299535	6.51192	HNF4A_NR2F1,2.p2	X62932|Xdh|22436|xanthine dehydrogenase	AK164764|Xdh|22436|xanthine dehydrogenase	AK034256|Xdh|22436|xanthine dehydrogenase	AK143412|Xdh|22436|xanthine dehydrogenase	AK161529|Xdh|22436|xanthine dehydrogenase	AK144700|Xdh|22436|xanthine dehydrogenase	BC141183|Xdh|22436|xanthine dehydrogenase	NM_011723|Xdh|22436|xanthine dehydrogenase	AK160010|Xdh|22436|xanthine dehydrogenase
mm9_v1_chr6_+_42195977_42196020	6.49884	HNF4A_NR2F1,2.p2	BC051507|Gstk1|76263|glutathione S-transferase kappa 1	BC038151|Gstk1|76263|glutathione S-transferase kappa 1	BC058163|Gstk1|76263|glutathione S-transferase kappa 1	AY279096|Gstk1|76263|glutathione S-transferase kappa 1
mm9_v1_chr5_-_17341534_17341556	6.46075	HNF4A_NR2F1,2.p2	L23108|Cd36|12491|CD36 antigen	AK151355|Cd36|12491|CD36 antigen
mm9_v1_chr8_-_5105158_5105231	6.45399	HNF4A_NR2F1,2.p2	D87059|Slc10a2|20494|solute carrier family 10, member 2	BC120703|Slc10a2|20494|solute carrier family 10, member 2	BC125290|Slc10a2|20494|solute carrier family 10, member 2	AB002693|Slc10a2|20494|solute carrier family 10, member 2	AY529655|Slc10a2|20494|solute carrier family 10, member 2	AY529656|Slc10a2|20494|solute carrier family 10, member 2	NM_011388|Slc10a2|20494|solute carrier family 10, member 2
mm9_v1_chr4_+_107845516_107845542	6.45102	HNF4A_NR2F1,2.p2	BC025454|Echdc2|52430|enoyl Coenzyme A hydratase domain containing 2
mm9_v1_chr17_-_37004131_37004154	6.4441	HNF4A_NR2F1,2.p2	BC027186|Trim15|69097|tripartite motif-containing 15	NM_001024134|Trim15|69097|tripartite motif-containing 15	AK007445|Trim15|69097|tripartite motif-containing 15	NM_001177872|Trim15|69097|tripartite motif-containing 15
mm9_v1_chr7_-_28122694_28122710	6.4436	HNF4A_NR2F1,2.p2	AF410798|Ltbp4|108075|latent transforming growth factor beta binding protein 4
mm9_v1_chr6_+_21935907_21936001	6.43099	HNF4A_NR2F1,2.p2	AK087585|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	NM_001081351|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK033229|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene	AK040587|A430107O13Rik|214642|RIKEN cDNA A430107O13 gene
mm9_v1_chr8_-_73183546_73183566	6.42013	HNF4A_NR2F1,2.p2	BC043041|Pgpep1|66522|pyroglutamyl-peptidase I	AK049632|Pgpep1|66522|pyroglutamyl-peptidase I	AJ278829|Pgpep1|66522|pyroglutamyl-peptidase I	BC051938|Pgpep1|66522|pyroglutamyl-peptidase I	AK012658|Pgpep1|66522|pyroglutamyl-peptidase I
mm9_v1_chr12_-_81213930_81214002	6.41727	HNF4A_NR2F1,2.p2	M58566|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC037998|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	BC016621|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK077855|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK021295|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK036950|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	AK051035|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1	NM_007564|Zfp36l1|12192|zinc finger protein 36, C3H type-like 1
mm9_v1_chr4_+_97444326_97444386	6.40936	HNF4A_NR2F1,2.p2	BC075702|Nfia|18027|nuclear factor I/A	D90172|Nfia|18027|nuclear factor I/A
mm9_v1_chr11_+_78312621_78312770	6.38221	HNF4A_NR2F1,2.p2	NM_011707|Vtn|22370|vitronectin	AK011736|Vtn|22370|vitronectin	AK090325|Vtn|22370|vitronectin	AK167494|Vtn|22370|vitronectin
mm9_v1_chr17_-_34987110_34987130	6.37661	HNF4A_NR2F1,2.p2	AK169864|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)	BC065999|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr15_+_82385501_82385543	6.37434	HNF4A_NR2F1,2.p2	BC026417|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	AK165474|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC089596|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	AK078880|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	NM_201360|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC139169|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC139170|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12	BC145567|Cyp2d12|380997|cytochrome P450, family 2, subfamily d, polypeptide 12
mm9_v1_chr14_-_55036515_55036535	6.3584	HNF4A_NR2F1,2.p2	AJ130943|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AK150950|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AK151718|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	NM_011405|Slc7a7|20540|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm9_v1_chr4_-_104782444_104782511	6.34059	HNF4A_NR2F1,2.p2	NM_178143|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	BC138565|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	BC138566|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm9_v1_chr11_+_69867869_69867875	6.33825	HNF4A_NR2F1,2.p2	NM_009714|Asgr1|11889|asialoglycoprotein receptor 1
mm9_v1_chr19_-_3912710_3912721	6.32166	HNF4A_NR2F1,2.p2	AK153182|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	NM_144870|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8
mm9_v1_chr7_+_148654681_148654765	6.31283	HNF4A_NR2F1,2.p2	NM_001111050|Cd151|12476|CD151 antigen	U89772|Cd151|12476|CD151 antigen	BC012236|Cd151|12476|CD151 antigen
mm9_v1_chr5_-_104406406_104406437	6.30857	HNF4A_NR2F1,2.p2	NM_001163486|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13	NM_198030|Hsd17b13|243168|hydroxysteroid (17-beta) dehydrogenase 13
mm9_v1_chr16_-_18089085_18089282	6.3006	HNF4A_NR2F1,2.p2	BC125327|Prodh|19125|proline dehydrogenase	BC008548|Prodh|19125|proline dehydrogenase	U80020|Prodh|19125|proline dehydrogenase	AF120279|Prodh|19125|proline dehydrogenase	AK144068|Prodh|19125|proline dehydrogenase	AK085938|Prodh|19125|proline dehydrogenase	NM_011172|Prodh|19125|proline dehydrogenase
mm9_v1_chr16_-_17928270_17928336	6.29957	HNF4A_NR2F1,2.p2	AK159289|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	AK170191|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	NM_153150|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm9_v1_chr17_-_34987131_34987136	6.27367	HNF4A_NR2F1,2.p2	BC062925|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr7_-_104886756_104886798	6.26451	HNF4A_NR2F1,2.p2	AK075757|Aqp11|66333|aquaporin 11	NM_175105|Aqp11|66333|aquaporin 11	AK006005|Aqp11|66333|aquaporin 11	AK137326|Aqp11|66333|aquaporin 11
mm9_v1_chr7_-_29383178_29383179	6.25659	HNF4A_NR2F1,2.p2	AK088512|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr17_-_34164996_34165023	6.25453	HNF4A_NR2F1,2.p2	BC086927|H2-Ke6|14979|H2-K region expressed gene 6	NM_013543|H2-Ke6|14979|H2-K region expressed gene 6
mm9_v1_chr14_+_122580904_122580944	6.25271	HNF4A_NR2F1,2.p2	NM_029556|Clybl|69634|citrate lyase beta like	BC023398|Clybl|69634|citrate lyase beta like	AK009345|Clybl|69634|citrate lyase beta like	AF428254|Clybl|69634|citrate lyase beta like
mm9_v1_chr10_+_127774845_127774868	6.23782	HNF4A_NR2F1,2.p2	AK166814|Cs|12974|citrate synthase	AK012151|Cs|12974|citrate synthase	AK145643|Cs|12974|citrate synthase	AK167125|Cs|12974|citrate synthase	AK163273|Cs|12974|citrate synthase
mm9_v1_chr7_-_137410321_137410321	6.22841	HNF4A_NR2F1,2.p2	NM_010207|Fgfr2|14183|fibroblast growth factor receptor 2	NM_201601|Fgfr2|14183|fibroblast growth factor receptor 2
mm9_v1_chr2_+_58607580_58607600	6.22415	HNF4A_NR2F1,2.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr12_+_81744869_81744959	6.22391	HNF4A_NR2F1,2.p2	BC058649|Slc39a9|328133|solute carrier family 39 (zinc transporter), member 9
mm9_v1_chr18_+_50355539_50355658	6.21267	HNF4A_NR2F1,2.p2	
mm9_v1_chr16_+_56477956_56478012	6.20765	HNF4A_NR2F1,2.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr11_+_78312784_78312851	6.20605	HNF4A_NR2F1,2.p2	X63003|Vtn|22370|vitronectin	BC012690|Vtn|22370|vitronectin	AF440693|Vtn|22370|vitronectin	M77123|Vtn|22370|vitronectin
mm9_v1_chr11_-_100259048_100259060	6.19191	HNF4A_NR2F1,2.p2	BC040757|Jup|16480|junction plakoglobin	NM_010593|Jup|16480|junction plakoglobin	BC094461|Jup|16480|junction plakoglobin
mm9_v1_chr16_-_32487964_32487964	6.18757	HNF4A_NR2F1,2.p2	AK052725|Osta|106407|organic solute transporter alpha	NM_145932|Osta|106407|organic solute transporter alpha
mm9_v1_chr2_+_156601175_156601221	6.17963	HNF4A_NR2F1,2.p2	AK007972|Myl9|98932|myosin, light polypeptide 9, regulatory	AK020258|Myl9|98932|myosin, light polypeptide 9, regulatory	NM_172118|Myl9|98932|myosin, light polypeptide 9, regulatory
mm9_v1_chr3_+_63100101_63100109	6.16984	HNF4A_NR2F1,2.p2	AK033824|Mme|17380|membrane metallo endopeptidase
mm9_v1_chr16_-_18407565_18407802	6.15877	HNF4A_NR2F1,2.p2	AK084547|Comt|12846|catechol-O-methyltransferase	AK133500|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr4_-_96220030_96220248	6.15019	HNF4A_NR2F1,2.p2	AK180579|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK186838|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK193212|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK210777|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK078893|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK165663|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK038636|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6
mm9_v1_chr4_+_149493452_149493452	6.10444	HNF4A_NR2F1,2.p2	AK029720|Slc2a5|56485|solute carrier family 2 (facilitated glucose transporter), member 5	NM_019741|Slc2a5|56485|solute carrier family 2 (facilitated glucose transporter), member 5
mm9_v1_chr5_+_114454810_114454816	6.10262	HNF4A_NR2F1,2.p2	BC018377|Dao|13142|D-amino acid oxidase
mm9_v1_chr11_-_100259061_100259098	6.09601	HNF4A_NR2F1,2.p2	AK170934|Jup|16480|junction plakoglobin	AK171501|Jup|16480|junction plakoglobin	AK145895|Jup|16480|junction plakoglobin
mm9_v1_chr7_+_29325883_29325903	6.09449	HNF4A_NR2F1,2.p2	AK003083|Sycn|68416|syncollin	BC019567|Sycn|68416|syncollin	NM_026716|Sycn|68416|syncollin
mm9_v1_chr12_+_114378368_114378447	6.0888	HNF4A_NR2F1,2.p2	NM_024223|Crip2|68337|cysteine rich protein 2
mm9_v1_chr10_+_74869758_74869765	6.08528	HNF4A_NR2F1,2.p2	AK149373|Upb1|103149|ureidopropionase, beta	AK149480|Upb1|103149|ureidopropionase, beta
mm9_v1_chr16_-_17928207_17928265	6.08071	HNF4A_NR2F1,2.p2	AK005070|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	BC037087|Slc25a1|13358|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm9_v1_chr6_+_42211957_42211968	6.07585	HNF4A_NR2F1,2.p2	AK053212|Tmem139|109218|transmembrane protein 139	NM_175408|Tmem139|109218|transmembrane protein 139
mm9_v1_chr9_+_108594470_108594519	6.06662	HNF4A_NR2F1,2.p2	AF533977|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	NM_008924|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC080276|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha	BC075623|Prkar2a|19087|protein kinase, cAMP dependent regulatory, type II alpha
mm9_v1_chr7_-_108986297_108986435	6.03627	HNF4A_NR2F1,2.p2	AK133359|Inppl1|16332|inositol polyphosphate phosphatase-like 1	AK149873|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_001122739|Inppl1|16332|inositol polyphosphate phosphatase-like 1	BC063080|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chr1_+_74438182_74438368	6.00254	HNF4A_NR2F1,2.p2	NM_153088|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AK089478|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC049184|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC058085|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr9_-_45747000_45747119	5.99378	HNF4A_NR2F1,2.p2	AK164745|Sidt2|214597|SID1 transmembrane family, member 2
mm9_v1_chr13_+_40982534_40982735	5.97976	HNF4A_NR2F1,2.p2	NM_008105|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK080061|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AK054226|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AB037597|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	AY435149|Gcnt2|14538|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm9_v1_chr3_+_95086814_95087156	5.95412	HNF4A_NR2F1,2.p2	NM_133858|Fam63a|75007|family with sequence similarity 63, member A	NM_199475|Fam63a|75007|family with sequence similarity 63, member A	AK169673|Fam63a|75007|family with sequence similarity 63, member A	AK036838|Fam63a|75007|family with sequence similarity 63, member A	BC094388|Fam63a|75007|family with sequence similarity 63, member A	AK087859|Fam63a|75007|family with sequence similarity 63, member A	AK162551|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr2_+_173936677_173936751	5.94389	HNF4A_NR2F1,2.p2	BC023239|Npepl1|228961|aminopeptidase-like 1	BC055448|Npepl1|228961|aminopeptidase-like 1
mm9_v1_chr1_+_74379182_74379257	5.93754	HNF4A_NR2F1,2.p2	AB041609|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	NM_019999|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK086034|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK158483|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia	AK041238|Pnkd|56695|paroxysmal nonkinesiogenic dyskinesia
mm9_v1_chr15_-_82184631_82184726	5.93436	HNF4A_NR2F1,2.p2	AK002749|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK010988|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	AK012328|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	BC048451|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)	NM_025987|Ndufa6|67130|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14)
mm9_v1_chr9_-_103190558_103190644	5.92692	HNF4A_NR2F1,2.p2	BC021390|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	AK005035|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	AK076237|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	NM_027918|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene
mm9_v1_chr4_-_41450064_41450152	5.92672	HNF4A_NR2F1,2.p2	BC137640|AI464131|329828|expressed sequence AI464131	BC140956|AI464131|329828|expressed sequence AI464131	AK173117|AI464131|329828|expressed sequence AI464131	NM_001085515|AI464131|329828|expressed sequence AI464131
mm9_v1_chr18_+_20716655_20716746	5.90916	HNF4A_NR2F1,2.p2	BC044848|Dsg2|13511|desmoglein 2	BC020144|Dsg2|13511|desmoglein 2
mm9_v1_chr2_+_35477568_35477592	5.89159	HNF4A_NR2F1,2.p2	AK147464|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	AK164475|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr8_+_112515370_112515467	5.87215	HNF4A_NR2F1,2.p2	BC024264|Tat|234724|tyrosine aminotransferase
mm9_v1_chr12_-_105195097_105195135	5.8664	HNF4A_NR2F1,2.p2	M75717|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	BC061176|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	NM_009247|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK004999|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK135650|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E
mm9_v1_chr8_-_73183574_73183581	5.8365	HNF4A_NR2F1,2.p2	AK003373|Pgpep1|66522|pyroglutamyl-peptidase I	AK047835|Pgpep1|66522|pyroglutamyl-peptidase I	NM_023217|Pgpep1|66522|pyroglutamyl-peptidase I
mm9_v1_chr3_+_121948399_121948534	5.83	HNF4A_NR2F1,2.p2	AK028236|Gclm|14630|glutamate-cysteine ligase, modifier subunit	NM_008129|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK172387|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr1_-_138130840_138130840	5.81849	HNF4A_NR2F1,2.p2	BC052416|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	BC053100|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene	NM_028872|5730559C18Rik|67313|RIKEN cDNA 5730559C18 gene
mm9_v1_chr11_+_70318775_70318815	5.80945	HNF4A_NR2F1,2.p2	NM_029360|Tm4sf5|75604|transmembrane 4 superfamily member 5	AK008064|Tm4sf5|75604|transmembrane 4 superfamily member 5	BC010782|Tm4sf5|75604|transmembrane 4 superfamily member 5
mm9_v1_chr8_-_74061134_74061382	5.79658	HNF4A_NR2F1,2.p2	AK009361|Bst2|69550|bone marrow stromal cell antigen 2	AK154399|Bst2|69550|bone marrow stromal cell antigen 2	BC087949|Bst2|69550|bone marrow stromal cell antigen 2	BC056638|Bst2|69550|bone marrow stromal cell antigen 2	NM_198095|Bst2|69550|bone marrow stromal cell antigen 2
mm9_v1_chr7_-_52560744_52560788	5.76836	HNF4A_NR2F1,2.p2	AK003969|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4
mm9_v1_chr7_+_19669194_19669289	5.75746	HNF4A_NR2F1,2.p2	NM_001190490|Dmpk|13400|dystrophia myotonica-protein kinase	NM_001190491|Dmpk|13400|dystrophia myotonica-protein kinase	NM_032418|Dmpk|13400|dystrophia myotonica-protein kinase	BC056615|Dmpk|13400|dystrophia myotonica-protein kinase	BC024150|Dmpk|13400|dystrophia myotonica-protein kinase	BC075715|Dmpk|13400|dystrophia myotonica-protein kinase
mm9_v1_chr1_-_63223190_63223282	5.73224	HNF4A_NR2F1,2.p2	BC015300|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK166604|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK078590|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK167705|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK146814|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK036926|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK142711|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	BC006660|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr12_-_77896534_77896540	5.73006	HNF4A_NR2F1,2.p2	NM_030677|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr11_+_105836521_105836521	5.72549	HNF4A_NR2F1,2.p2	M55333|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	NM_009598|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr7_-_20282950_20283001	5.72168	HNF4A_NR2F1,2.p2	M73490|Apoe|11816|apolipoprotein E
mm9_v1_chr17_-_28623006_28623098	5.71949	HNF4A_NR2F1,2.p2	U36220|Fkbp5|14229|FK506 binding protein 5	BC015260|Fkbp5|14229|FK506 binding protein 5	AK169795|Fkbp5|14229|FK506 binding protein 5	NM_010220|Fkbp5|14229|FK506 binding protein 5	U16959|Fkbp5|14229|FK506 binding protein 5
mm9_v1_chr2_+_35139479_35139560	5.69455	HNF4A_NR2F1,2.p2	AK135632|Gsn|227753|gelsolin
mm9_v1_chr17_-_34987150_34987162	5.6881	HNF4A_NR2F1,2.p2	AK139051|Skiv2l|108077|superkiller viralicidic activity 2-like (S. cerevisiae)
mm9_v1_chr11_+_72249027_72249053	5.68497	HNF4A_NR2F1,2.p2	AK018485|Ggt6|71522|gamma-glutamyltransferase 6	BC058747|Ggt6|71522|gamma-glutamyltransferase 6	NM_027819|Ggt6|71522|gamma-glutamyltransferase 6	BC055837|Ggt6|71522|gamma-glutamyltransferase 6
mm9_v1_chr1_+_127457542_127457669	5.673	HNF4A_NR2F1,2.p2	AK145848|Slc35f5|74150|solute carrier family 35, member F5	NM_028787|Slc35f5|74150|solute carrier family 35, member F5	AK076339|Slc35f5|74150|solute carrier family 35, member F5	AK004892|Slc35f5|74150|solute carrier family 35, member F5	AK171951|Slc35f5|74150|solute carrier family 35, member F5
mm9_v1_chr2_+_145648290_145648325	5.66561	HNF4A_NR2F1,2.p2	AK151332|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chr9_+_108382180_108382248	5.64918	HNF4A_NR2F1,2.p2	NM_008483|Lamb2|16779|laminin, beta 2	AK140351|Lamb2|16779|laminin, beta 2	AK158444|Lamb2|16779|laminin, beta 2
mm9_v1_chr3_+_121670737_121670783	5.63631	HNF4A_NR2F1,2.p2	AK044979|Arhgap29|214137|Rho GTPase activating protein 29	AK043637|Arhgap29|214137|Rho GTPase activating protein 29	BC052858|Arhgap29|214137|Rho GTPase activating protein 29
mm9_v1_chr4_+_97444494_97444517	5.60592	HNF4A_NR2F1,2.p2	AK052204|Nfia|18027|nuclear factor I/A
mm9_v1_chr8_-_86118344_86118395	5.59936	HNF4A_NR2F1,2.p2	AK013558|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK002384|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK010984|Tecr|106529|trans-2,3-enoyl-CoA reductase	BC019984|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK020708|Tecr|106529|trans-2,3-enoyl-CoA reductase	NM_027179|Tecr|106529|trans-2,3-enoyl-CoA reductase	NM_134118|Tecr|106529|trans-2,3-enoyl-CoA reductase
mm9_v1_chr10_+_62524324_62524364	5.59743	HNF4A_NR2F1,2.p2	AK143947|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	AK002802|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	BC019997|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	NM_026701|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1
mm9_v1_chr2_+_155207581_155207616	5.58711	HNF4A_NR2F1,2.p2	AJ297793|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK146589|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	BC043086|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	NM_178111|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK149495|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr12_-_105066203_105066249	5.58124	HNF4A_NR2F1,2.p2	BC037008|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr19_-_29122186_29122463	5.57787	HNF4A_NR2F1,2.p2	AB020203|Ak3|56248|adenylate kinase 3	AK031631|Ak3|56248|adenylate kinase 3	BC024871|Ak3|56248|adenylate kinase 3	NM_021299|Ak3|56248|adenylate kinase 3	BC016432|Ak3|56248|adenylate kinase 3	AK004864|Ak3|56248|adenylate kinase 3	AK008681|Ak3|56248|adenylate kinase 3	BC058191|Ak3|56248|adenylate kinase 3	BC019174|Ak3|56248|adenylate kinase 3	AK007618|Ak3|56248|adenylate kinase 3	AK089027|Ak3|56248|adenylate kinase 3	AK005194|Ak3|56248|adenylate kinase 3	AK149996|Ak3|56248|adenylate kinase 3	AK053644|Ak3|56248|adenylate kinase 3	AK147060|Ak3|56248|adenylate kinase 3
mm9_v1_chr7_+_52882857_52882906	5.56131	HNF4A_NR2F1,2.p2	AK156602|Rasip1|69903|Ras interacting protein 1	BC127059|Rasip1|69903|Ras interacting protein 1	BC028483|Rasip1|69903|Ras interacting protein 1	BC150766|Rasip1|69903|Ras interacting protein 1	NM_028544|Rasip1|69903|Ras interacting protein 1
mm9_v1_chr19_+_39135495_39135572	5.56005	HNF4A_NR2F1,2.p2	NM_028191|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	AY227733|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC051089|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC118514|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	BC117531|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65	AK008688|Cyp2c65|72303|cytochrome P450, family 2, subfamily c, polypeptide 65
mm9_v1_chr1_+_92811676_92811782	5.5511	HNF4A_NR2F1,2.p2	NM_053015|Mlph|171531|melanophilin	AF384098|Mlph|171531|melanophilin	BC006900|Mlph|171531|melanophilin	AK008973|Mlph|171531|melanophilin	AK019883|Mlph|171531|melanophilin	AK148274|Mlph|171531|melanophilin	BC150804|Mlph|171531|melanophilin
mm9_v1_chr2_-_154900132_154900153	5.5503	HNF4A_NR2F1,2.p2	L32836|Ahcy|269378|S-adenosylhomocysteine hydrolase
mm9_v1_chr10_+_61183396_61183396	5.54591	HNF4A_NR2F1,2.p2	BC038129|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2	NM_153779|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2
mm9_v1_chr4_-_58219368_58219467	5.53219	HNF4A_NR2F1,2.p2	AK052699|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AF206329|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_022814|Svep1|64817|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
mm9_v1_chr18_-_60760086_60760117	5.524	HNF4A_NR2F1,2.p2	AK034012|Synpo|104027|synaptopodin
mm9_v1_chr8_-_73919683_73919738	5.50828	HNF4A_NR2F1,2.p2	BC026453|Ushbp1|234395|Usher syndrome 1C binding protein 1	AK043798|Ushbp1|234395|Usher syndrome 1C binding protein 1	NM_181418|Ushbp1|234395|Usher syndrome 1C binding protein 1	AK034939|Ushbp1|234395|Usher syndrome 1C binding protein 1
mm9_v1_chr17_-_56144975_56145021	5.50793	HNF4A_NR2F1,2.p2	BC026642|Stap2|106766|signal transducing adaptor family member 2	NM_145934|Stap2|106766|signal transducing adaptor family member 2	AK050172|Stap2|106766|signal transducing adaptor family member 2	AK050131|Stap2|106766|signal transducing adaptor family member 2
mm9_v1_chr18_+_70085202_70085238	5.5052	HNF4A_NR2F1,2.p2	AK078964|Ccdc68|381175|coiled-coil domain containing 68	NM_201362|Ccdc68|381175|coiled-coil domain containing 68	BC046343|Ccdc68|381175|coiled-coil domain containing 68
mm9_v1_chr4_+_59594461_59594510	5.49331	HNF4A_NR2F1,2.p2	AK085899|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK136773|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK011910|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr16_+_32430986_32431114	5.49026	HNF4A_NR2F1,2.p2	AK044585|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	NM_009981|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	L28956|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	Z12302|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	AK076050|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	NM_001163159|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform
mm9_v1_chr18_+_12492494_12492679	5.4835	HNF4A_NR2F1,2.p2	AJ293592|Lama3|16774|laminin, alpha 3	NM_010680|Lama3|16774|laminin, alpha 3	U88353|Lama3|16774|laminin, alpha 3
mm9_v1_chr11_-_46512331_46512331	5.47606	HNF4A_NR2F1,2.p2	NM_001161355|Timd2|171284|T-cell immunoglobulin and mucin domain containing 2
mm9_v1_chr2_-_27102703_27102843	5.47331	HNF4A_NR2F1,2.p2	AK159236|Sardh|192166|sarcosine dehydrogenase	AK159681|Sardh|192166|sarcosine dehydrogenase	AK159704|Sardh|192166|sarcosine dehydrogenase
mm9_v1_chr5_+_114222723_114222894	5.4254	HNF4A_NR2F1,2.p2	AK039834|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK157864|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK009421|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK083247|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	AK009021|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	NM_025526|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	BC048409|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	BC096049|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)	BC028800|Iscu|66383|IscU iron-sulfur cluster scaffold homolog (E. coli)
mm9_v1_chr4_-_131978279_131978374	5.40801	HNF4A_NR2F1,2.p2	BC096033|Phactr4|100169|phosphatase and actin regulator 4	AK049209|Phactr4|100169|phosphatase and actin regulator 4	BC075672|Phactr4|100169|phosphatase and actin regulator 4	AK220496|Phactr4|100169|phosphatase and actin regulator 4	NM_001161797|Phactr4|100169|phosphatase and actin regulator 4	NM_175306|Phactr4|100169|phosphatase and actin regulator 4
mm9_v1_chr19_-_10175969_10175986	5.40445	HNF4A_NR2F1,2.p2	BC057189|Fads2|56473|fatty acid desaturase 2
mm9_v1_chr15_+_89164891_89164933	5.37942	HNF4A_NR2F1,2.p2	AK165481|Miox|56727|myo-inositol oxygenase	AK002406|Miox|56727|myo-inositol oxygenase	BC013543|Miox|56727|myo-inositol oxygenase	NM_019977|Miox|56727|myo-inositol oxygenase	AF197127|Miox|56727|myo-inositol oxygenase	AY738257|Miox|56727|myo-inositol oxygenase
mm9_v1_chr7_+_31338319_31338323	5.37318	HNF4A_NR2F1,2.p2	BC089621|Hspb6|243912|heat shock protein, alpha-crystallin-related, B6	NM_001012401|Hspb6|243912|heat shock protein, alpha-crystallin-related, B6
mm9_v1_chr19_+_39188387_39188399	5.35114	HNF4A_NR2F1,2.p2	AY227734|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	NM_001011707|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	BC147819|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	BC147824|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66	AK008512|Cyp2c66|69888|cytochrome P450, family 2, subfamily c, polypeptide 66
mm9_v1_chr5_-_100812885_100812885	5.34469	HNF4A_NR2F1,2.p2	BC054358|Sec31a|69162|Sec31 homolog A (S. cerevisiae)
mm9_v1_chr7_-_87080143_87080213	5.34356	HNF4A_NR2F1,2.p2	BC031379|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK051261|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	NM_027420|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK039350|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK011654|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene	AK156013|2610034B18Rik|70420|RIKEN cDNA 2610034B18 gene
mm9_v1_chr14_+_119379988_119380035	5.34092	HNF4A_NR2F1,2.p2	AK200390|Dnajc3|100037258|DnaJ (Hsp40) homolog, subfamily C, member 3
mm9_v1_chrX_-_49518428_49518445	5.33145	HNF4A_NR2F1,2.p2	X83577|Gpc4|14735|glypican 4
mm9_v1_chr6_-_134516930_134517009	5.32465	HNF4A_NR2F1,2.p2	BC060704|Lrp6|16974|low density lipoprotein receptor-related protein 6	NM_008514|Lrp6|16974|low density lipoprotein receptor-related protein 6
mm9_v1_chr6_-_6167034_6167063	5.3156	HNF4A_NR2F1,2.p2	AK002829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK012670|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr1_-_141456740_141456821	5.28523	HNF4A_NR2F1,2.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr8_-_86118291_86118339	5.28118	HNF4A_NR2F1,2.p2	AK179321|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK010513|Tecr|106529|trans-2,3-enoyl-CoA reductase	BC094046|Tecr|106529|trans-2,3-enoyl-CoA reductase
mm9_v1_chr6_+_125299938_125300059	5.26823	HNF4A_NR2F1,2.p2	AK211886|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	M59377|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	AY541589|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	AY541590|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a
mm9_v1_chr19_-_3912727_3912762	5.26492	HNF4A_NR2F1,2.p2	BC086766|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK149674|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	BC021616|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK153900|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK164901|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8	AK167907|Ndufs8|225887|NADH dehydrogenase (ubiquinone) Fe-S protein 8
mm9_v1_chr11_-_61080588_61080704	5.23465	HNF4A_NR2F1,2.p2	BC003797|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	U14390|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK079571|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK079639|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK148462|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK163040|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK169157|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK170251|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	NM_007437|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK086262|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK051219|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK078243|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK170195|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152156|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152735|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152800|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK140932|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK159246|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2
mm9_v1_chr2_-_154900160_154900169	5.22191	HNF4A_NR2F1,2.p2	BC086781|Ahcy|269378|S-adenosylhomocysteine hydrolase	BC015304|Ahcy|269378|S-adenosylhomocysteine hydrolase	BC108367|Ahcy|269378|S-adenosylhomocysteine hydrolase
mm9_v1_chr2_-_66512442_66512445	5.21607	HNF4A_NR2F1,2.p2	AK004093|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr7_-_77505248_77505478	5.19135	HNF4A_NR2F1,2.p2	X76653|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	U07635|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK140125|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	BC042484|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_009697|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr1_-_63223287_63223307	5.19124	HNF4A_NR2F1,2.p2	AK034597|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr7_-_20283542_20283606	5.18468	HNF4A_NR2F1,2.p2	CT010212|Apoe|11816|apolipoprotein E	CT010356|Apoe|11816|apolipoprotein E	M12414|Apoe|11816|apolipoprotein E
mm9_v1_chr9_+_80012837_80012863	5.17767	HNF4A_NR2F1,2.p2	NM_001039546|Myo6|17920|myosin VI	AK053882|Myo6|17920|myosin VI
mm9_v1_chr11_+_97547236_97547285	5.17175	HNF4A_NR2F1,2.p2	NM_001085500|Cisd3|217149|CDGSH iron sulfur domain 3	BC056217|Cisd3|217149|CDGSH iron sulfur domain 3
mm9_v1_chr5_-_31999977_32000001	5.15968	HNF4A_NR2F1,2.p2	BC023339|Rbks|71336|ribokinase	NM_153196|Rbks|71336|ribokinase	AK017229|Rbks|71336|ribokinase	AK138939|Rbks|71336|ribokinase
mm9_v1_chr17_-_24781872_24781901	5.15625	HNF4A_NR2F1,2.p2	BC065778|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	AK002557|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	NM_023449|Slc9a3r2|65962|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm9_v1_chr7_+_107325179_107325188	5.1535	HNF4A_NR2F1,2.p2	NM_001190869|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3	AK132773|Kcne3|57442|potassium voltage-gated channel, Isk-related subfamily, gene 3
mm9_v1_chr2_-_143814199_143814217	5.14368	HNF4A_NR2F1,2.p2	AK019964|Rrbp1|81910|ribosome binding protein 1
mm9_v1_chr4_+_59594569_59594621	5.12691	HNF4A_NR2F1,2.p2	AK145230|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AY725196|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr12_-_105101768_105101807	5.12311	HNF4A_NR2F1,2.p2	BC057984|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr17_-_57387033_57387124	5.10285	HNF4A_NR2F1,2.p2	AK047364|Gpr108|78308|G protein-coupled receptor 108	AF376726|Gpr108|78308|G protein-coupled receptor 108	AX775897|Gpr108|78308|G protein-coupled receptor 108	AK082797|Gpr108|78308|G protein-coupled receptor 108	BC016104|Gpr108|78308|G protein-coupled receptor 108	NM_030084|Gpr108|78308|G protein-coupled receptor 108	AK159313|Gpr108|78308|G protein-coupled receptor 108	AK170948|Gpr108|78308|G protein-coupled receptor 108	AK171030|Gpr108|78308|G protein-coupled receptor 108	AX775895|Gpr108|78308|G protein-coupled receptor 108
mm9_v1_chr4_+_41707341_41707397	5.07989	HNF4A_NR2F1,2.p2	AK146742|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	AK155407|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	AK159559|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	U14412|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	BC004619|Il11ra1|16157|interleukin 11 receptor, alpha chain 1
mm9_v1_chr4_+_97444563_97444661	5.06711	HNF4A_NR2F1,2.p2	D90176|Nfia|18027|nuclear factor I/A	Y07690|Nfia|18027|nuclear factor I/A	Y07691|Nfia|18027|nuclear factor I/A	BC122878|Nfia|18027|nuclear factor I/A	BC122880|Nfia|18027|nuclear factor I/A	AF326553|Nfia|18027|nuclear factor I/A	AF326554|Nfia|18027|nuclear factor I/A	U57633|Nfia|18027|nuclear factor I/A
mm9_v1_chr6_+_91928871_91928905	5.06354	HNF4A_NR2F1,2.p2	AK220153|Fgd5|232237|FYVE, RhoGEF and PH domain containing 5
mm9_v1_chr11_+_61298978_61299017	5.05863	HNF4A_NR2F1,2.p2	AK075659|Mfap4|76293|microfibrillar-associated protein 4
mm9_v1_chr7_+_52003841_52004004	5.02486	HNF4A_NR2F1,2.p2	AK150435|Vrk3|101568|vaccinia related kinase 3	AK171673|Vrk3|101568|vaccinia related kinase 3	BC024839|Vrk3|101568|vaccinia related kinase 3	NM_133945|Vrk3|101568|vaccinia related kinase 3	BC027129|Vrk3|101568|vaccinia related kinase 3
mm9_v1_chr7_-_106501620_106501629	5.02362	HNF4A_NR2F1,2.p2	BC085143|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	J05609|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK029080|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK031457|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK076474|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK077660|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK077992|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK079460|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK086519|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK086523|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK089993|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK090103|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK159697|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK159998|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK166000|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK167403|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK169422|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK168442|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm9_v1_chr2_-_154900188_154900232	5.01692	HNF4A_NR2F1,2.p2	AK151097|Ahcy|269378|S-adenosylhomocysteine hydrolase	AK153421|Ahcy|269378|S-adenosylhomocysteine hydrolase	AK154302|Ahcy|269378|S-adenosylhomocysteine hydrolase	AK169331|Ahcy|269378|S-adenosylhomocysteine hydrolase	NM_016661|Ahcy|269378|S-adenosylhomocysteine hydrolase
mm9_v1_chr15_-_89260070_89260126	5.00287	HNF4A_NR2F1,2.p2	
mm9_v1_chr8_+_13026014_13026055	5.00005	HNF4A_NR2F1,2.p2	AK154742|F7|14068|coagulation factor VII	NM_010172|F7|14068|coagulation factor VII	AK171362|F7|14068|coagulation factor VII	AK089402|F7|14068|coagulation factor VII	U44795|F7|14068|coagulation factor VII	AK155323|F7|14068|coagulation factor VII	BC061149|F7|14068|coagulation factor VII
mm9_v1_chr1_+_166081951_166082088	4.99172	HNF4A_NR2F1,2.p2	AK137521|F5|14067|coagulation factor V	AK139240|F5|14067|coagulation factor V	AK137537|F5|14067|coagulation factor V	NM_007976|F5|14067|coagulation factor V	U52925|F5|14067|coagulation factor V
mm9_v1_chr12_-_105101743_105101767	4.98673	HNF4A_NR2F1,2.p2	BC011040|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC037007|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC047128|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC049970|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	M75721|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	AK146619|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC057982|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC012874|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr11_+_67051530_67051557	4.98103	HNF4A_NR2F1,2.p2	NM_010855|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066419|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ233297|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle
mm9_v1_chr7_-_91733736_91733768	4.95526	HNF4A_NR2F1,2.p2	AK215090|Fah|14085|fumarylacetoacetate hydrolase
mm9_v1_chr9_+_50560862_50561082	4.95223	HNF4A_NR2F1,2.p2	NM_009964|Cryab|12955|crystallin, alpha B
mm9_v1_chr6_-_6167086_6167104	4.94719	HNF4A_NR2F1,2.p2	AK029020|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr10_+_87322774_87322795	4.94659	HNF4A_NR2F1,2.p2	AK038119|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr4_+_59594516_59594564	4.93565	HNF4A_NR2F1,2.p2	AJ293845|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK144948|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	BC002211|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr6_+_134364445_134364503	4.92657	HNF4A_NR2F1,2.p2	AK018579|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	AK035707|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	AK008682|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)	BC025541|Bcl2l14|66813|BCL2-like 14 (apoptosis facilitator)
mm9_v1_chr12_+_30687597_30687686	4.90494	HNF4A_NR2F1,2.p2	BC037709|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr1_+_137732910_137732930	4.896	HNF4A_NR2F1,2.p2	BC063753|Tnnt2|21956|troponin T2, cardiac
mm9_v1_chrX_-_137135022_137135060	4.88396	HNF4A_NR2F1,2.p2	AF201289|Tsc22d3|14605|TSC22 domain family, member 3	EU818782|Tsc22d3|14605|TSC22 domain family, member 3	NM_001077364|Tsc22d3|14605|TSC22 domain family, member 3
mm9_v1_chr4_-_57155985_57156016	4.87631	HNF4A_NR2F1,2.p2	AK165783|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr2_-_168567436_168567596	4.87205	HNF4A_NR2F1,2.p2	AF152243|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chr15_+_81641832_81641859	4.86671	HNF4A_NR2F1,2.p2	NM_017376|Tef|21685|thyrotroph embryonic factor	AY540631|Tef|21685|thyrotroph embryonic factor
mm9_v1_chr17_-_34875879_34875932	4.84064	HNF4A_NR2F1,2.p2	X05314|C4b|12268|complement component 4B (Childo blood group)
mm9_v1_chr4_+_19935558_19935623	4.80489	HNF4A_NR2F1,2.p2	AK050374|Ttpa|50500|tocopherol (alpha) transfer protein	BC099869|Ttpa|50500|tocopherol (alpha) transfer protein	BC099870|Ttpa|50500|tocopherol (alpha) transfer protein	BC099871|Ttpa|50500|tocopherol (alpha) transfer protein	NM_015767|Ttpa|50500|tocopherol (alpha) transfer protein	BC099868|Ttpa|50500|tocopherol (alpha) transfer protein	AF218416|Ttpa|50500|tocopherol (alpha) transfer protein	AK004882|Ttpa|50500|tocopherol (alpha) transfer protein
mm9_v1_chr7_-_129329688_129329765	4.79959	HNF4A_NR2F1,2.p2	AF071777|Ern2|26918|endoplasmic reticulum (ER) to nucleus signalling 2	BC108999|Ern2|26918|endoplasmic reticulum (ER) to nucleus signalling 2	BC109000|Ern2|26918|endoplasmic reticulum (ER) to nucleus signalling 2	AK153659|Ern2|26918|endoplasmic reticulum (ER) to nucleus signalling 2	AK139291|Ern2|26918|endoplasmic reticulum (ER) to nucleus signalling 2	NM_012016|Ern2|26918|endoplasmic reticulum (ER) to nucleus signalling 2
mm9_v1_chr2_+_92218979_92219090	4.79527	HNF4A_NR2F1,2.p2	
mm9_v1_chr9_-_103132606_103132682	4.79417	HNF4A_NR2F1,2.p2	BC012313|Trf|22041|transferrin	NM_133977|Trf|22041|transferrin	AK150782|Trf|22041|transferrin
mm9_v1_chr11_+_98902556_98902703	4.78737	HNF4A_NR2F1,2.p2	AK031212|Igfbp4|16010|insulin-like growth factor binding protein 4	AK150229|Igfbp4|16010|insulin-like growth factor binding protein 4	AK165688|Igfbp4|16010|insulin-like growth factor binding protein 4	NM_010517|Igfbp4|16010|insulin-like growth factor binding protein 4	BC019836|Igfbp4|16010|insulin-like growth factor binding protein 4	X81582|Igfbp4|16010|insulin-like growth factor binding protein 4
mm9_v1_chr5_-_108863376_108863419	4.77748	HNF4A_NR2F1,2.p2	S52977|Atp5k|11958|ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e	BC089550|Atp5k|11958|ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e	BC028438|Atp5k|11958|ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e	NM_007507|Atp5k|11958|ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e	AK011342|Atp5k|11958|ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e
mm9_v1_chr10_-_39744964_39745039	4.76978	HNF4A_NR2F1,2.p2	BC018406|AI317395|215929|expressed sequence AI317395	AK085521|AI317395|215929|expressed sequence AI317395
mm9_v1_chr1_+_195128163_195128239	4.76393	HNF4A_NR2F1,2.p2	NM_008484|Lamb3|16780|laminin, beta 3	U43298|Lamb3|16780|laminin, beta 3
mm9_v1_chr1_-_82232392_82232507	4.751	HNF4A_NR2F1,2.p2	AK141842|Irs1|16367|insulin receptor substrate 1
mm9_v1_chr11_-_5798780_5798788	4.75021	HNF4A_NR2F1,2.p2	BC061100|Myl7|17898|myosin, light polypeptide 7, regulatory	AK146716|Myl7|17898|myosin, light polypeptide 7, regulatory	NM_022879|Myl7|17898|myosin, light polypeptide 7, regulatory
mm9_v1_chr1_-_74331210_74331311	4.74212	HNF4A_NR2F1,2.p2	AK151820|Aamp|227290|angio-associated migratory protein	AK167621|Aamp|227290|angio-associated migratory protein	AK162750|Aamp|227290|angio-associated migratory protein	AK146470|Aamp|227290|angio-associated migratory protein	NM_001190444|Aamp|227290|angio-associated migratory protein	NM_146110|Aamp|227290|angio-associated migratory protein
mm9_v1_chr14_-_55196138_55196410	4.73478	HNF4A_NR2F1,2.p2	BC011035|Jub|16475|ajuba	NM_010590|Jub|16475|ajuba	U79776|Jub|16475|ajuba
mm9_v1_chr5_-_108304062_108304125	4.72641	HNF4A_NR2F1,2.p2	AK165332|Evi5|14020|ecotropic viral integration site 5	BC030056|Evi5|14020|ecotropic viral integration site 5	NM_007964|Evi5|14020|ecotropic viral integration site 5	U53586|Evi5|14020|ecotropic viral integration site 5
mm9_v1_chr9_+_46050492_46050601	4.72378	HNF4A_NR2F1,2.p2	
mm9_v1_chr7_+_53152425_53152567	4.71029	HNF4A_NR2F1,2.p2	NM_144801|Tmem143|70209|transmembrane protein 143	BC017618|Tmem143|70209|transmembrane protein 143	AK035836|Tmem143|70209|transmembrane protein 143	AK010209|Tmem143|70209|transmembrane protein 143	AK171908|Tmem143|70209|transmembrane protein 143	AK087636|Tmem143|70209|transmembrane protein 143
mm9_v1_chr4_-_104782337_104782438	4.70867	HNF4A_NR2F1,2.p2	AK044030|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	AK134573|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm9_v1_chr4_+_128670474_128670574	4.70485	HNF4A_NR2F1,2.p2	AK050133|Ak2|11637|adenylate kinase 2	AK167797|Ak2|11637|adenylate kinase 2	NM_001033966|Ak2|11637|adenylate kinase 2	AK168148|Ak2|11637|adenylate kinase 2	AB020202|Ak2|11637|adenylate kinase 2	AK168056|Ak2|11637|adenylate kinase 2	AK010936|Ak2|11637|adenylate kinase 2	AK010951|Ak2|11637|adenylate kinase 2	AK077519|Ak2|11637|adenylate kinase 2	BC008610|Ak2|11637|adenylate kinase 2	NM_016895|Ak2|11637|adenylate kinase 2	AK166976|Ak2|11637|adenylate kinase 2
mm9_v1_chr6_-_85087735_85087775	4.69786	HNF4A_NR2F1,2.p2	BC054423|Spr|20751|sepiapterin reductase	BC010400|Spr|20751|sepiapterin reductase	AK004941|Spr|20751|sepiapterin reductase	NM_011467|Spr|20751|sepiapterin reductase	AK154720|Spr|20751|sepiapterin reductase	S77493|Spr|20751|sepiapterin reductase
mm9_v1_chr7_+_125777249_125777358	4.67876	HNF4A_NR2F1,2.p2	AY263159|Tmc5|74424|transmembrane channel-like gene family 5	NM_028930|Tmc5|74424|transmembrane channel-like gene family 5	AK016573|Tmc5|74424|transmembrane channel-like gene family 5	AY236495|Tmc5|74424|transmembrane channel-like gene family 5
mm9_v1_chr11_-_98448496_98448592	4.67046	HNF4A_NR2F1,2.p2	BC046594|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK087497|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK012718|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK154085|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	AK009621|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)	NM_025661|Ormdl3|66612|ORM1-like 3 (S. cerevisiae)
mm9_v1_chr15_+_81641869_81641976	4.66148	HNF4A_NR2F1,2.p2	AK145125|Tef|21685|thyrotroph embryonic factor	AK154472|Tef|21685|thyrotroph embryonic factor	BC036982|Tef|21685|thyrotroph embryonic factor	AF194420|Tef|21685|thyrotroph embryonic factor	AK147965|Tef|21685|thyrotroph embryonic factor
mm9_v1_chr11_+_87391881_87392001	4.64223	HNF4A_NR2F1,2.p2	AK133933|Sept4|18952|septin 4	AK137299|Sept4|18952|septin 4	AK039859|Sept4|18952|septin 4
mm9_v1_chr6_-_48791052_48791158	4.62257	HNF4A_NR2F1,2.p2	NM_001164209|Tmem176b|65963|transmembrane protein 176B
mm9_v1_chr11_-_119966955_119966991	4.61369	HNF4A_NR2F1,2.p2	AK194453|Slc38a10|72055|solute carrier family 38, member 10	BC023375|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr19_+_4000579_4000658	4.58429	HNF4A_NR2F1,2.p2	AK045197|Nudt8|66387|nudix (nucleoside diphosphate linked moiety X)-type motif 8	NM_025529|Nudt8|66387|nudix (nucleoside diphosphate linked moiety X)-type motif 8	BC056443|Nudt8|66387|nudix (nucleoside diphosphate linked moiety X)-type motif 8	AK170076|Nudt8|66387|nudix (nucleoside diphosphate linked moiety X)-type motif 8	AK002605|Nudt8|66387|nudix (nucleoside diphosphate linked moiety X)-type motif 8	AK009700|Nudt8|66387|nudix (nucleoside diphosphate linked moiety X)-type motif 8
mm9_v1_chr10_-_127058163_127058193	4.57338	HNF4A_NR2F1,2.p2	AF367720|Lrp1|16971|low density lipoprotein receptor-related protein 1	X67469|Lrp1|16971|low density lipoprotein receptor-related protein 1
mm9_v1_chr16_+_90738690_90738714	4.57015	HNF4A_NR2F1,2.p2	AK158113|Mrap|77037|melanocortin 2 receptor accessory protein	BC027543|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chr17_-_34137152_34137212	4.56725	HNF4A_NR2F1,2.p2	BC054430|H2-K1|14972|histocompatibility 2, K1, K region	M11975|H2-K1|14972|histocompatibility 2, K1, K region	AY989882|H2-K1|14972|histocompatibility 2, K1, K region	M60168|H2-K1|14972|histocompatibility 2, K1, K region	M60169|H2-K1|14972|histocompatibility 2, K1, K region	M69071|H2-K1|14972|histocompatibility 2, K1, K region	M69072|H2-K1|14972|histocompatibility 2, K1, K region	M69073|H2-K1|14972|histocompatibility 2, K1, K region	U47328|H2-K1|14972|histocompatibility 2, K1, K region	U47330|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr4_+_41709182_41709267	4.5398	HNF4A_NR2F1,2.p2	NM_010549|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	X74953|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	BC057664|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	AK143811|Il11ra1|16157|interleukin 11 receptor, alpha chain 1
mm9_v1_chr7_-_30033397_30033450	4.53976	HNF4A_NR2F1,2.p2	AK033738|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	BC086934|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene	AK008617|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene
mm9_v1_chr8_+_3641684_3641749	4.5291	HNF4A_NR2F1,2.p2	AK196224|Stxbp2|20911|syntaxin binding protein 2
mm9_v1_chr6_-_87740264_87740322	4.52099	HNF4A_NR2F1,2.p2	AK050098|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr9_+_118415358_118415568	4.49622	HNF4A_NR2F1,2.p2	AK161568|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AK172292|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC037641|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	AF051357|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC003268|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC096467|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	NM_018748|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC023102|Golga4|54214|golgi autoantigen, golgin subfamily a, 4	BC057561|Golga4|54214|golgi autoantigen, golgin subfamily a, 4
mm9_v1_chr11_+_96205082_96205082	4.48683	HNF4A_NR2F1,2.p2	NM_010458|Hoxb3|15410|homeobox B3	S35628|Hoxb3|15410|homeobox B3	X66177|Hoxb3|15410|homeobox B3
mm9_v1_chr19_+_10708722_10708782	4.48407	HNF4A_NR2F1,2.p2	AK005010|Vwce|71768|von Willebrand factor C and EGF domains	NM_027913|Vwce|71768|von Willebrand factor C and EGF domains	BC030181|Vwce|71768|von Willebrand factor C and EGF domains	BC043473|Vwce|71768|von Willebrand factor C and EGF domains
mm9_v1_chr17_-_34136793_34136951	4.4797	HNF4A_NR2F1,2.p2	M14827|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr12_-_105143089_105143106	4.46646	HNF4A_NR2F1,2.p2	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC009818|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC010984|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC011041|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	M75720|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC021780|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC024108|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr5_-_121038602_121038704	4.46114	HNF4A_NR2F1,2.p2	AK037856|Tpcn1|252972|two pore channel 1	AK077411|Tpcn1|252972|two pore channel 1	BC058951|Tpcn1|252972|two pore channel 1	NM_145853|Tpcn1|252972|two pore channel 1	AF217002|Tpcn1|252972|two pore channel 1	AK148129|Tpcn1|252972|two pore channel 1
mm9_v1_chr9_-_108208304_108208348	4.43964	HNF4A_NR2F1,2.p2	AK133663|Tcta|102791|T-cell leukemia translocation altered gene
mm9_v1_chr2_+_122591075_122591156	4.43446	HNF4A_NR2F1,2.p2	AK075598|Sqrdl|59010|sulfide quinone reductase-like (yeast)	NM_001162503|Sqrdl|59010|sulfide quinone reductase-like (yeast)	AK149948|Sqrdl|59010|sulfide quinone reductase-like (yeast)	AK008290|Sqrdl|59010|sulfide quinone reductase-like (yeast)	BC028247|Sqrdl|59010|sulfide quinone reductase-like (yeast)	BC011153|Sqrdl|59010|sulfide quinone reductase-like (yeast)
mm9_v1_chr2_+_31804066_31804106	4.43262	HNF4A_NR2F1,2.p2	AK004365|1110064A23Rik|68893|RIKEN cDNA 1110064A23 gene
mm9_v1_chr3_+_121948541_121948621	4.43009	HNF4A_NR2F1,2.p2	BC132404|Gclm|14630|glutamate-cysteine ligase, modifier subunit	BC138783|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr6_+_34659440_34659540	4.42041	HNF4A_NR2F1,2.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chr13_-_73465894_73465936	4.40697	HNF4A_NR2F1,2.p2	AK147147|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC076501|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC059730|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	BC086933|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6	NM_010888|Ndufs6|407785|NADH dehydrogenase (ubiquinone) Fe-S protein 6
mm9_v1_chr6_+_34304098_34304193	4.38994	HNF4A_NR2F1,2.p2	NM_008012|Akr1b8|14187|aldo-keto reductase family 1, member B8	U04204|Akr1b8|14187|aldo-keto reductase family 1, member B8	BC005789|Akr1b8|14187|aldo-keto reductase family 1, member B8
mm9_v1_chr6_-_6167113_6167172	4.36194	HNF4A_NR2F1,2.p2	AK151180|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK152237|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AF164632|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	AK150496|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_001177572|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	NM_015829|Slc25a13|50799|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm9_v1_chr12_+_78339999_78340029	4.36145	HNF4A_NR2F1,2.p2	AK048520|Fut8|53618|fucosyltransferase 8	NM_016893|Fut8|53618|fucosyltransferase 8	AK163494|Fut8|53618|fucosyltransferase 8
mm9_v1_chr7_+_148021164_148021184	4.33726	HNF4A_NR2F1,2.p2	AK004470|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr12_+_60232417_60232447	4.3264	HNF4A_NR2F1,2.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr18_-_35786880_35786902	4.32595	HNF4A_NR2F1,2.p2	AK143959|Slc23a1|20522|solute carrier family 23 (nucleobase transporters), member 1	NM_011397|Slc23a1|20522|solute carrier family 23 (nucleobase transporters), member 1
mm9_v1_chr14_+_34736772_34736788	4.3204	HNF4A_NR2F1,2.p2	BC058358|Gdf10|14560|growth differentiation factor 10	NM_145741|Gdf10|14560|growth differentiation factor 10	AK042684|Gdf10|14560|growth differentiation factor 10
mm9_v1_chr9_+_95459990_95460369	4.30905	HNF4A_NR2F1,2.p2	AY424298|Paqr9|75552|progestin and adipoQ receptor family member IX	NM_198414|Paqr9|75552|progestin and adipoQ receptor family member IX	AK133021|Paqr9|75552|progestin and adipoQ receptor family member IX
mm9_v1_chr7_+_31497227_31497370	4.30872	HNF4A_NR2F1,2.p2	AK143905|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	BC015262|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	NM_018731|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	U17282|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide
mm9_v1_chr6_+_83087016_83087103	4.3041	HNF4A_NR2F1,2.p2	NM_009106|Rtkn|20166|rhotekin	NM_133641|Rtkn|20166|rhotekin	U54638|Rtkn|20166|rhotekin	BC013820|Rtkn|20166|rhotekin
mm9_v1_chr2_+_35122282_35122330	4.29736	HNF4A_NR2F1,2.p2	AK166831|Gsn|227753|gelsolin
mm9_v1_chr2_+_155207542_155207579	4.29429	HNF4A_NR2F1,2.p2	AK170132|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr14_+_55059393_55059736	4.29167	HNF4A_NR2F1,2.p2	AK212295|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK186724|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK183589|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK218925|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK212401|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)
mm9_v1_chr2_+_34627729_34627749	4.29066	HNF4A_NR2F1,2.p2	AK151244|Hspa5|14828|heat shock protein 5	D78645|Hspa5|14828|heat shock protein 5
mm9_v1_chr16_+_32431315_32431315	4.27762	HNF4A_NR2F1,2.p2	AK076830|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform	NM_001163160|Pcyt1a|13026|phosphate cytidylyltransferase 1, choline, alpha isoform
mm9_v1_chr6_+_83004687_83004775	4.27249	HNF4A_NR2F1,2.p2	AK171202|Aup1|11993|ancient ubiquitous protein 1	AK171011|Aup1|11993|ancient ubiquitous protein 1	AK171184|Aup1|11993|ancient ubiquitous protein 1	BC016485|Aup1|11993|ancient ubiquitous protein 1	AK144497|Aup1|11993|ancient ubiquitous protein 1	AK158035|Aup1|11993|ancient ubiquitous protein 1	AK167335|Aup1|11993|ancient ubiquitous protein 1	AK171249|Aup1|11993|ancient ubiquitous protein 1	AK171541|Aup1|11993|ancient ubiquitous protein 1	U41736|Aup1|11993|ancient ubiquitous protein 1	AK171621|Aup1|11993|ancient ubiquitous protein 1	BC012699|Aup1|11993|ancient ubiquitous protein 1
mm9_v1_chr9_-_76893529_76893587	4.26441	HNF4A_NR2F1,2.p2	AF153366|Tinag|26944|tubulointerstitial nephritis antigen	BC010745|Tinag|26944|tubulointerstitial nephritis antigen	AK008374|Tinag|26944|tubulointerstitial nephritis antigen	NM_012033|Tinag|26944|tubulointerstitial nephritis antigen
mm9_v1_chr6_+_129483206_129483210	4.25838	HNF4A_NR2F1,2.p2	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr8_-_37676995_37677010	4.24583	HNF4A_NR2F1,2.p2	AK162413|Dlc1|50768|deleted in liver cancer 1	NM_015802|Dlc1|50768|deleted in liver cancer 1
mm9_v1_chr3_-_129458190_129458239	4.24563	HNF4A_NR2F1,2.p2	V00741|Egf|13645|epidermal growth factor	BC060741|Egf|13645|epidermal growth factor	BC092277|Egf|13645|epidermal growth factor	BC017681|Egf|13645|epidermal growth factor	AK084927|Egf|13645|epidermal growth factor	J00380|Egf|13645|epidermal growth factor	NM_010113|Egf|13645|epidermal growth factor
mm9_v1_chr12_-_77896481_77896489	4.24122	HNF4A_NR2F1,2.p2	BC066825|Gpx2|14776|glutathione peroxidase 2	BC039658|Gpx2|14776|glutathione peroxidase 2
mm9_v1_chr3_+_37538808_37538883	4.23886	HNF4A_NR2F1,2.p2	BC053428|Spry1|24063|sprouty homolog 1 (Drosophila)	NM_011896|Spry1|24063|sprouty homolog 1 (Drosophila)	AK014578|Spry1|24063|sprouty homolog 1 (Drosophila)	AK140405|Spry1|24063|sprouty homolog 1 (Drosophila)	BC039139|Spry1|24063|sprouty homolog 1 (Drosophila)
mm9_v1_chr10_+_127525538_127525558	4.23642	HNF4A_NR2F1,2.p2	AK193315|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK201737|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212560|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK213511|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216817|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217965|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217971|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK220050|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr10_+_79792864_79792975	4.21819	HNF4A_NR2F1,2.p2	AK002562|Reep6|70335|receptor accessory protein 6	BC029741|Reep6|70335|receptor accessory protein 6	AB039933|Reep6|70335|receptor accessory protein 6	NM_139292|Reep6|70335|receptor accessory protein 6	AY562234|Reep6|70335|receptor accessory protein 6
mm9_v1_chr14_+_102237708_102237728	4.20796	HNF4A_NR2F1,2.p2	BC082553|Lmo7|380928|LIM domain only 7
mm9_v1_chrX_+_70918446_70918580	4.19517	HNF4A_NR2F1,2.p2	NM_001142809|Slc6a8|102857|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_001142810|Slc6a8|102857|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	NM_133987|Slc6a8|102857|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	AF459435|Slc6a8|102857|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	BC141067|Slc6a8|102857|solute carrier family 6 (neurotransmitter transporter, creatine), member 8	BC145319|Slc6a8|102857|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
mm9_v1_chr15_-_90880241_90880381	4.19372	HNF4A_NR2F1,2.p2	AF202892|Kif21a|16564|kinesin family member 21A	BC060698|Kif21a|16564|kinesin family member 21A	BC062896|Kif21a|16564|kinesin family member 21A	AK163536|Kif21a|16564|kinesin family member 21A	AK047880|Kif21a|16564|kinesin family member 21A	AK147436|Kif21a|16564|kinesin family member 21A	AK008213|Kif21a|16564|kinesin family member 21A	AK047350|Kif21a|16564|kinesin family member 21A	NM_001109040|Kif21a|16564|kinesin family member 21A	NM_001109041|Kif21a|16564|kinesin family member 21A	NM_001109042|Kif21a|16564|kinesin family member 21A	NM_016705|Kif21a|16564|kinesin family member 21A	AK019525|Kif21a|16564|kinesin family member 21A
mm9_v1_chr19_+_6384413_6384432	4.19297	HNF4A_NR2F1,2.p2	AF124787|Pygm|19309|muscle glycogen phosphorylase	NM_011224|Pygm|19309|muscle glycogen phosphorylase	BC012961|Pygm|19309|muscle glycogen phosphorylase
mm9_v1_chr17_-_26335980_26336160	4.18798	HNF4A_NR2F1,2.p2	AK007743|Pdia2|69191|protein disulfide isomerase associated 2	BC116671|Pdia2|69191|protein disulfide isomerase associated 2	NM_001081070|Pdia2|69191|protein disulfide isomerase associated 2
mm9_v1_chr4_+_19935389_19935537	4.18369	HNF4A_NR2F1,2.p2	BC026882|Ttpa|50500|tocopherol (alpha) transfer protein
mm9_v1_chr3_-_122241909_122241984	4.16855	HNF4A_NR2F1,2.p2	AK019185|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr9_-_103132523_103132605	4.16634	HNF4A_NR2F1,2.p2	AF440692|Trf|22041|transferrin	BC092046|Trf|22041|transferrin	BC058216|Trf|22041|transferrin	BC020295|Trf|22041|transferrin	BC022986|Trf|22041|transferrin	BC058218|Trf|22041|transferrin	AK085754|Trf|22041|transferrin	AK142599|Trf|22041|transferrin	AK146549|Trf|22041|transferrin	AK149559|Trf|22041|transferrin	AK149595|Trf|22041|transferrin	AK168368|Trf|22041|transferrin	AK168405|Trf|22041|transferrin	AK168419|Trf|22041|transferrin	AK168938|Trf|22041|transferrin	AK169187|Trf|22041|transferrin
mm9_v1_chr4_-_151502979_151503033	4.1556	HNF4A_NR2F1,2.p2	BC057888|Espn|56226|espin	AK002284|Espn|56226|espin	BC044723|Espn|56226|espin	NM_019585|Espn|56226|espin
mm9_v1_chrX_+_45461901_45462257	4.15288	HNF4A_NR2F1,2.p2	AK172086|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	NM_133213|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AF428102|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK164538|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK078835|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK087627|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AK085520|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	AF367247|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	BC140977|Xpnpep2|170745|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
mm9_v1_chr11_+_69794546_69794727	4.14802	HNF4A_NR2F1,2.p2	AK076150|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	BC018265|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	NM_026017|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	AK012063|Ctdnep1|67181|CTD nuclear envelope phosphatase 1	AK164602|Ctdnep1|67181|CTD nuclear envelope phosphatase 1
mm9_v1_chr3_+_19857053_19857266	4.14255	HNF4A_NR2F1,2.p2	BC062957|Cp|12870|ceruloplasmin	NM_001042611|Cp|12870|ceruloplasmin	NM_007752|Cp|12870|ceruloplasmin	DQ336396|Cp|12870|ceruloplasmin	AK014835|Cp|12870|ceruloplasmin	AK043248|Cp|12870|ceruloplasmin	U49430|Cp|12870|ceruloplasmin	AK149523|Cp|12870|ceruloplasmin
mm9_v1_chr17_-_27075896_27076239	4.14153	HNF4A_NR2F1,2.p2	AK181681|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK187338|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC037500|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC021463|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr4_-_138648762_138648917	4.13969	HNF4A_NR2F1,2.p2	BC099856|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	BC099857|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	BC099858|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	D50263|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK167311|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK133787|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK146535|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	NM_008675|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1	AK158008|Nbl1|17965|neuroblastoma, suppression of tumorigenicity 1
mm9_v1_chr16_-_92466335_92466428	4.12544	HNF4A_NR2F1,2.p2	AY325904|Rcan1|54720|regulator of calcineurin 1	AK146764|Rcan1|54720|regulator of calcineurin 1	NM_001081549|Rcan1|54720|regulator of calcineurin 1
mm9_v1_chr6_+_129483215_129483234	4.08796	HNF4A_NR2F1,2.p2	AK011975|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK159015|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK167500|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr15_+_58765328_58765389	4.07711	HNF4A_NR2F1,2.p2	AK002254|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	AK003540|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	AK004522|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	NM_023172|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	BC031539|Ndufb9|66218|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm9_v1_chr12_-_105101825_105101829	4.07585	HNF4A_NR2F1,2.p2	NM_009243|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr7_+_148021207_148021235	4.07498	HNF4A_NR2F1,2.p2	BC051545|1190003J15Rik|76974|RIKEN cDNA 1190003J15 gene
mm9_v1_chr11_+_94811409_94811411	4.06635	HNF4A_NR2F1,2.p2	U03419|Col1a1|12842|collagen, type I, alpha 1
mm9_v1_chr7_+_26682646_26682679	4.06498	HNF4A_NR2F1,2.p2	AK028103|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10
mm9_v1_chr4_+_59594434_59594435	4.04935	HNF4A_NR2F1,2.p2	NM_024255|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr4_+_44994235_44994334	4.04654	HNF4A_NR2F1,2.p2	AK004307|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AK018293|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	BC010194|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	NM_080289|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AK168351|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AY113690|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AK172201|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase
mm9_v1_chr6_-_119338677_119338775	4.03741	HNF4A_NR2F1,2.p2	AK148295|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr11_+_61298923_61298953	4.02651	HNF4A_NR2F1,2.p2	NM_029568|Mfap4|76293|microfibrillar-associated protein 4	AK003537|Mfap4|76293|microfibrillar-associated protein 4	BC022666|Mfap4|76293|microfibrillar-associated protein 4
mm9_v1_chr10_-_80363422_80363432	3.98251	HNF4A_NR2F1,2.p2	AK176965|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr6_+_129483238_129483284	3.97766	HNF4A_NR2F1,2.p2	BC004602|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr15_-_10643273_10643318	3.97385	HNF4A_NR2F1,2.p2	AF274866|Rai14|75646|retinoic acid induced 14	BC052458|Rai14|75646|retinoic acid induced 14	NM_030690|Rai14|75646|retinoic acid induced 14	AK006172|Rai14|75646|retinoic acid induced 14
mm9_v1_chr13_-_60278859_60278952	3.96709	HNF4A_NR2F1,2.p2	NM_008086|Gas1|14451|growth arrest specific 1
mm9_v1_chr18_-_60760126_60760150	3.96466	HNF4A_NR2F1,2.p2	AK049810|Synpo|104027|synaptopodin
mm9_v1_chr1_-_63223345_63223399	3.96105	HNF4A_NR2F1,2.p2	NM_001160038|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160039|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160040|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_145518|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr10_+_127774872_127774973	3.94189	HNF4A_NR2F1,2.p2	BC013554|Cs|12974|citrate synthase	BC029754|Cs|12974|citrate synthase	NM_026444|Cs|12974|citrate synthase	AB056479|Cs|12974|citrate synthase
mm9_v1_chr2_+_155833791_155833870	3.92659	HNF4A_NR2F1,2.p2	BC057130|Ergic3|66366|ERGIC and golgi 3	AK050285|Ergic3|66366|ERGIC and golgi 3	BC043720|Ergic3|66366|ERGIC and golgi 3	AK009350|Ergic3|66366|ERGIC and golgi 3	AK013942|Ergic3|66366|ERGIC and golgi 3	NM_025516|Ergic3|66366|ERGIC and golgi 3
mm9_v1_chr4_+_137280366_137280389	3.92552	HNF4A_NR2F1,2.p2	AK005063|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chr2_+_35547418_35547513	3.92468	HNF4A_NR2F1,2.p2	AY305657|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001001602|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr15_-_97976073_97976140	3.92447	HNF4A_NR2F1,2.p2	AK030168|Asb8|78541|ankyrin repeat and SOCS box-containing 8	AK087299|Asb8|78541|ankyrin repeat and SOCS box-containing 8	NM_001170710|Asb8|78541|ankyrin repeat and SOCS box-containing 8	NM_030121|Asb8|78541|ankyrin repeat and SOCS box-containing 8
mm9_v1_chr15_-_58913543_58913652	3.91915	HNF4A_NR2F1,2.p2	BC024131|Mtss1|211401|metastasis suppressor 1	AK083756|Mtss1|211401|metastasis suppressor 1	AK046628|Mtss1|211401|metastasis suppressor 1	AK129139|Mtss1|211401|metastasis suppressor 1	NM_001146180|Mtss1|211401|metastasis suppressor 1	NM_144800|Mtss1|211401|metastasis suppressor 1
mm9_v1_chr7_+_26682681_26682715	3.91172	HNF4A_NR2F1,2.p2	BC060973|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	NM_009999|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	AF128849|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	M21856|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10	X99715|Cyp2b10|13088|cytochrome P450, family 2, subfamily b, polypeptide 10
mm9_v1_chr17_-_34134101_34134261	3.89459	HNF4A_NR2F1,2.p2	M23894|H2-K1|14972|histocompatibility 2, K1, K region	M23895|H2-K1|14972|histocompatibility 2, K1, K region	M23896|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr2_+_25356281_25356297	3.89033	HNF4A_NR2F1,2.p2	AK019715|Fbxw5|30839|F-box and WD-40 domain protein 5	NM_013908|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr5_+_23870625_23870649	3.88992	HNF4A_NR2F1,2.p2	AK158106|Nos3|18127|nitric oxide synthase 3, endothelial cell	AK077896|Nos3|18127|nitric oxide synthase 3, endothelial cell	NM_008713|Nos3|18127|nitric oxide synthase 3, endothelial cell	U53142|Nos3|18127|nitric oxide synthase 3, endothelial cell	BC052636|Nos3|18127|nitric oxide synthase 3, endothelial cell
mm9_v1_chr12_-_105143108_105143185	3.88132	HNF4A_NR2F1,2.p2	BC021325|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	NM_009245|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr15_+_9209583_9209621	3.88024	HNF4A_NR2F1,2.p2	NM_207216|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1	AK143745|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1	AK128903|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1	BC025940|Ugt3a1|105887|UDP glycosyltransferases 3 family, polypeptide A1
mm9_v1_chr4_-_44079664_44079905	3.85799	HNF4A_NR2F1,2.p2	AK199019|Gne|50798|glucosamine	AJ132236|Gne|50798|glucosamine
mm9_v1_chr8_+_12915892_12915957	3.82912	HNF4A_NR2F1,2.p2	NM_178076|Mcf2l|17207|mcf.2 transforming sequence-like	AK082849|Mcf2l|17207|mcf.2 transforming sequence-like	AK048898|Mcf2l|17207|mcf.2 transforming sequence-like	BC058622|Mcf2l|17207|mcf.2 transforming sequence-like
mm9_v1_chr7_-_123182257_123182257	3.82831	HNF4A_NR2F1,2.p2	AK048143|Sox6|20679|SRY-box containing gene 6	NM_001025559|Sox6|20679|SRY-box containing gene 6
mm9_v1_chr19_+_10116079_10116095	3.81717	HNF4A_NR2F1,2.p2	AB041560|Fads3|60527|fatty acid desaturase 3
mm9_v1_chr3_+_37538897_37539001	3.81488	HNF4A_NR2F1,2.p2	AF176903|Spry1|24063|sprouty homolog 1 (Drosophila)	BC051977|Spry1|24063|sprouty homolog 1 (Drosophila)
mm9_v1_chr19_+_25107619_25107625	3.79225	HNF4A_NR2F1,2.p2	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr5_-_75073816_75073896	3.78096	HNF4A_NR2F1,2.p2	AF034746|Lnx1|16924|ligand of numb-protein X 1	BC139771|Lnx1|16924|ligand of numb-protein X 1	AK044127|Lnx1|16924|ligand of numb-protein X 1	BC040367|Lnx1|16924|ligand of numb-protein X 1	AK161194|Lnx1|16924|ligand of numb-protein X 1	AK138326|Lnx1|16924|ligand of numb-protein X 1	NM_001159578|Lnx1|16924|ligand of numb-protein X 1	NM_001159579|Lnx1|16924|ligand of numb-protein X 1	NM_001159580|Lnx1|16924|ligand of numb-protein X 1	NM_010727|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr8_-_87370795_87370829	3.77562	HNF4A_NR2F1,2.p2	NM_007591|Calr|12317|calreticulin
mm9_v1_chr11_-_89864036_89864209	3.75958	HNF4A_NR2F1,2.p2	Z50024|Pctp|18559|phosphatidylcholine transfer protein	BC053478|Pctp|18559|phosphatidylcholine transfer protein	BC071234|Pctp|18559|phosphatidylcholine transfer protein	AF151639|Pctp|18559|phosphatidylcholine transfer protein	NM_008796|Pctp|18559|phosphatidylcholine transfer protein
mm9_v1_chr14_+_80400057_80400108	3.75594	HNF4A_NR2F1,2.p2	BC141127|Olfm4|380924|olfactomedin 4	BC145436|Olfm4|380924|olfactomedin 4	AK133536|Olfm4|380924|olfactomedin 4	NM_001030294|Olfm4|380924|olfactomedin 4
mm9_v1_chr2_-_91476551_91476600	3.75257	HNF4A_NR2F1,2.p2	AK050056|F2|14061|coagulation factor II	AK167532|F2|14061|coagulation factor II	AK149367|F2|14061|coagulation factor II	BC013662|F2|14061|coagulation factor II	NM_010168|F2|14061|coagulation factor II	X52308|F2|14061|coagulation factor II
mm9_v1_chr1_-_92864172_92864243	3.74372	HNF4A_NR2F1,2.p2	AK009707|Rab17|19329|RAB17, member RAS oncogene family	NM_001159725|Rab17|19329|RAB17, member RAS oncogene family
mm9_v1_chr4_-_61496155_61496213	3.73865	HNF4A_NR2F1,2.p2	EU882233|Mup5|17844|major urinary protein 5	BC132310|Mup5|17844|major urinary protein 5	BC132312|Mup5|17844|major urinary protein 5	M16360|Mup5|17844|major urinary protein 5	NM_008649|Mup5|17844|major urinary protein 5
mm9_v1_chr16_+_18777032_18777088	3.73362	HNF4A_NR2F1,2.p2	U82758|Cldn5|12741|claudin 5	AF087823|Cldn5|12741|claudin 5
mm9_v1_chr19_+_8845478_8845506	3.72489	HNF4A_NR2F1,2.p2	AK002249|Tmem223|66836|transmembrane protein 223	NM_025791|Tmem223|66836|transmembrane protein 223	AK008282|Tmem223|66836|transmembrane protein 223	AK008327|Tmem223|66836|transmembrane protein 223	BC066781|Tmem223|66836|transmembrane protein 223	AK003417|Tmem223|66836|transmembrane protein 223	AK160470|Tmem223|66836|transmembrane protein 223	AK013392|Tmem223|66836|transmembrane protein 223
mm9_v1_chr5_+_64203602_64203733	3.72068	HNF4A_NR2F1,2.p2	AK050792|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	AK002869|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	NM_029554|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene
mm9_v1_chr19_-_5844533_5844701	3.72024	HNF4A_NR2F1,2.p2	AK191927|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	AK197973|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	BC095948|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)	BC064019|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr6_+_83004642_83004658	3.71616	HNF4A_NR2F1,2.p2	AK154707|Aup1|11993|ancient ubiquitous protein 1	NM_007517|Aup1|11993|ancient ubiquitous protein 1
mm9_v1_chr2_+_132673469_132673469	3.69709	HNF4A_NR2F1,2.p2	AK016165|Crls1|66586|cardiolipin synthase 1	NM_025646|Crls1|66586|cardiolipin synthase 1
mm9_v1_chr12_-_105011767_105011793	3.69468	HNF4A_NR2F1,2.p2	M75718|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr2_-_26788845_26789009	3.6922	HNF4A_NR2F1,2.p2	AK216354|Surf4|20932|surfeit gene 4	AK150568|Surf4|20932|surfeit gene 4	AK151319|Surf4|20932|surfeit gene 4	BC027352|Surf4|20932|surfeit gene 4	AK151161|Surf4|20932|surfeit gene 4	BC003280|Surf4|20932|surfeit gene 4	AK152692|Surf4|20932|surfeit gene 4	AK004691|Surf4|20932|surfeit gene 4	AK128902|Surf4|20932|surfeit gene 4	AK145670|Surf4|20932|surfeit gene 4
mm9_v1_chr5_-_17341512_17341522	3.67865	HNF4A_NR2F1,2.p2	AK052825|Cd36|12491|CD36 antigen
mm9_v1_chr17_-_27889845_27889920	3.66036	HNF4A_NR2F1,2.p2	AK081219|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed	AK082788|D17Wsu92e|224647|DNA segment, Chr 17, Wayne State University 92, expressed
mm9_v1_chr3_-_88258754_88258795	3.65811	HNF4A_NR2F1,2.p2	AK035918|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr2_+_30122256_30122418	3.65511	HNF4A_NR2F1,2.p2	BC039982|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1	AK046118|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr12_+_21322219_21322285	3.63709	HNF4A_NR2F1,2.p2	BC060949|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK005287|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	NM_026347|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK011299|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	AK014743|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)	BC087901|Iah1|67732|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_193730645_193730708	3.63303	HNF4A_NR2F1,2.p2	AK145100|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	NM_009579|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1	BC052166|Slc30a1|22782|solute carrier family 30 (zinc transporter), member 1
mm9_v1_chr17_-_15963372_15963555	3.61483	HNF4A_NR2F1,2.p2	BC138890|Rgmb|68799|RGM domain family, member B	AK035713|Rgmb|68799|RGM domain family, member B	AK046637|Rgmb|68799|RGM domain family, member B	AK080819|Rgmb|68799|RGM domain family, member B	BC096024|Rgmb|68799|RGM domain family, member B	AK030386|Rgmb|68799|RGM domain family, member B	AK047390|Rgmb|68799|RGM domain family, member B	BC030405|Rgmb|68799|RGM domain family, member B	AJ557514|Rgmb|68799|RGM domain family, member B	NM_178615|Rgmb|68799|RGM domain family, member B
mm9_v1_chr6_-_5446277_5446311	3.60798	HNF4A_NR2F1,2.p2	AJ001418|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	NM_013743|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	BC026134|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK004543|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4	AK036818|Pdk4|27273|pyruvate dehydrogenase kinase, isoenzyme 4
mm9_v1_chr6_-_85854877_85854931	3.60622	HNF4A_NR2F1,2.p2	BC029200|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene	NM_029331|1700019G17Rik|75541|RIKEN cDNA 1700019G17 gene
mm9_v1_chr6_+_129483154_129483185	3.6029	HNF4A_NR2F1,2.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr11_+_72990584_72990782	3.60124	HNF4A_NR2F1,2.p2	AK004963|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_029564|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK168533|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK170485|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK085679|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK150816|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC008166|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC094314|Tax1bp3|76281|Tax1 (human T-cell leukemia virus type I) binding protein 3
mm9_v1_chr2_-_147872704_147872704	3.58011	HNF4A_NR2F1,2.p2	NM_010446|Foxa2|15376|forkhead box A2	X74937|Foxa2|15376|forkhead box A2
mm9_v1_chr3_-_107820766_107820890	3.57255	HNF4A_NR2F1,2.p2	J04632|Gstm1|14862|glutathione S-transferase, mu 1	NM_010358|Gstm1|14862|glutathione S-transferase, mu 1
mm9_v1_chr7_-_29941186_29941253	3.56351	HNF4A_NR2F1,2.p2	BC058765|Fam98c|73833|family with sequence similarity 98, member C	AK166139|Fam98c|73833|family with sequence similarity 98, member C	AK003496|Fam98c|73833|family with sequence similarity 98, member C	AK138395|Fam98c|73833|family with sequence similarity 98, member C	AK171108|Fam98c|73833|family with sequence similarity 98, member C	AK080790|Fam98c|73833|family with sequence similarity 98, member C	NM_001146023|Fam98c|73833|family with sequence similarity 98, member C
mm9_v1_chr11_-_116060358_116060358	3.56058	HNF4A_NR2F1,2.p2	BC056448|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl	NM_015729|Acox1|11430|acyl-Coenzyme A oxidase 1, palmitoyl
mm9_v1_chr6_-_129401762_129402017	3.55213	HNF4A_NR2F1,2.p2	AK049608|Clec1a|243653|C-type lectin domain family 1, member a	AK031121|Clec1a|243653|C-type lectin domain family 1, member a	BC052840|Clec1a|243653|C-type lectin domain family 1, member a	AK036846|Clec1a|243653|C-type lectin domain family 1, member a	AK165920|Clec1a|243653|C-type lectin domain family 1, member a	NM_175526|Clec1a|243653|C-type lectin domain family 1, member a
mm9_v1_chr11_-_106257752_106257921	3.5516	HNF4A_NR2F1,2.p2	AK162104|Ern1|78943|endoplasmic reticulum (ER) to nucleus signalling 1
mm9_v1_chr15_+_82176434_82176522	3.55088	HNF4A_NR2F1,2.p2	AK151325|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK152795|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	BC028457|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	NM_026914|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK005345|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	AK170899|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene	BC092006|1500032L24Rik|69029|RIKEN cDNA 1500032L24 gene
mm9_v1_chr11_+_82724754_82724832	3.53863	HNF4A_NR2F1,2.p2	NM_178680|Unc45b|217012|unc-45 homolog B (C. elegans)	AK084418|Unc45b|217012|unc-45 homolog B (C. elegans)	AK168968|Unc45b|217012|unc-45 homolog B (C. elegans)	AK081821|Unc45b|217012|unc-45 homolog B (C. elegans)	AK169274|Unc45b|217012|unc-45 homolog B (C. elegans)	AK052294|Unc45b|217012|unc-45 homolog B (C. elegans)	BC084585|Unc45b|217012|unc-45 homolog B (C. elegans)
mm9_v1_chr5_-_4104331_4104507	3.53509	HNF4A_NR2F1,2.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr12_+_85379311_85379384	3.53501	HNF4A_NR2F1,2.p2	AK046630|Acot4|171282|acyl-CoA thioesterase 4	NM_134247|Acot4|171282|acyl-CoA thioesterase 4	AK080883|Acot4|171282|acyl-CoA thioesterase 4	AK050420|Acot4|171282|acyl-CoA thioesterase 4	BC113185|Acot4|171282|acyl-CoA thioesterase 4
mm9_v1_chr4_+_57858096_57858154	3.52922	HNF4A_NR2F1,2.p2	NM_001035532|Akap2|11641|A kinase (PRKA) anchor protein 2	NM_009649|Akap2|11641|A kinase (PRKA) anchor protein 2	AK041873|Akap2|11641|A kinase (PRKA) anchor protein 2	AK147420|Akap2|11641|A kinase (PRKA) anchor protein 2	BC003735|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr19_-_4877874_4877883	3.52717	HNF4A_NR2F1,2.p2	BC111890|Actn3|11474|actinin alpha 3	AF093775|Actn3|11474|actinin alpha 3	NM_013456|Actn3|11474|actinin alpha 3
mm9_v1_chr5_-_36022428_36022430	3.52542	HNF4A_NR2F1,2.p2	AK035194|Htra3|78558|HtrA serine peptidase 3	NM_001042615|Htra3|78558|HtrA serine peptidase 3	NM_030127|Htra3|78558|HtrA serine peptidase 3
mm9_v1_chr6_+_86145477_86145494	3.49088	HNF4A_NR2F1,2.p2	AK162680|Tgfa|21802|transforming growth factor alpha	M92420|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr7_+_73224518_73224593	3.4888	HNF4A_NR2F1,2.p2	NM_024439|H47|109815|histocompatibility 47	BC011091|H47|109815|histocompatibility 47	AK005204|H47|109815|histocompatibility 47	BC096566|H47|109815|histocompatibility 47	AF335543|H47|109815|histocompatibility 47
mm9_v1_chr12_-_104594210_104594210	3.48279	HNF4A_NR2F1,2.p2	BC031161|Asb2|65256|ankyrin repeat and SOCS box-containing 2	NM_023049|Asb2|65256|ankyrin repeat and SOCS box-containing 2
mm9_v1_chr6_-_133803670_133803684	3.48238	HNF4A_NR2F1,2.p2	BC013453|Kap|16483|kidney androgen regulated protein	M22810|Kap|16483|kidney androgen regulated protein	AK142506|Kap|16483|kidney androgen regulated protein	NM_010594|Kap|16483|kidney androgen regulated protein
mm9_v1_chr2_+_25356320_25356408	3.47428	HNF4A_NR2F1,2.p2	AF176520|Fbxw5|30839|F-box and WD-40 domain protein 5	BC010776|Fbxw5|30839|F-box and WD-40 domain protein 5	AK154911|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr6_-_72566691_72566744	3.47242	HNF4A_NR2F1,2.p2	CT010269|Tgoln1|22134|trans-golgi network protein	AK161242|Tgoln1|22134|trans-golgi network protein	AK145212|Tgoln2|22135|trans-golgi network protein 2	BC009143|Tgoln1|22134|trans-golgi network protein	BC141218|Tgoln1|22134|trans-golgi network protein	BC145542|Tgoln1|22134|trans-golgi network protein	AK133559|Tgoln1|22134|trans-golgi network protein	D50031|Tgoln1|22134|trans-golgi network protein	D50032|Tgoln2|22135|trans-golgi network protein 2	NM_009444|Tgoln2|22135|trans-golgi network protein 2	AK041302|Tgoln1|22134|trans-golgi network protein	AK162574|Tgoln1|22134|trans-golgi network protein
mm9_v1_chr14_+_41964744_41964800	3.45358	HNF4A_NR2F1,2.p2	NM_010775|Mbl1|17194|mannose-binding lectin (protein A) 1	S42292|Mbl1|17194|mannose-binding lectin (protein A) 1	AK034788|Mbl1|17194|mannose-binding lectin (protein A) 1	BC012245|Mbl1|17194|mannose-binding lectin (protein A) 1	BC021762|Mbl1|17194|mannose-binding lectin (protein A) 1	D11441|Mbl1|17194|mannose-binding lectin (protein A) 1
mm9_v1_chr5_-_17866110_17866320	3.45328	HNF4A_NR2F1,2.p2	BC138862|Gnai1|14677|guanine nucleotide binding protein (G protein), alpha inhibiting 1	BC138865|Gnai1|14677|guanine nucleotide binding protein (G protein), alpha inhibiting 1	BC032995|Gnai1|14677|guanine nucleotide binding protein (G protein), alpha inhibiting 1	NM_010305|Gnai1|14677|guanine nucleotide binding protein (G protein), alpha inhibiting 1
mm9_v1_chr1_+_134212642_134212774	3.45114	HNF4A_NR2F1,2.p2	NM_001195025|Nuak2|74137|NUAK family, SNF1-like kinase, 2	NM_028778|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK034082|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK004737|Nuak2|74137|NUAK family, SNF1-like kinase, 2	AK033672|Nuak2|74137|NUAK family, SNF1-like kinase, 2	BC046833|Nuak2|74137|NUAK family, SNF1-like kinase, 2	BC033302|Nuak2|74137|NUAK family, SNF1-like kinase, 2
mm9_v1_chr7_-_107806887_107806989	3.44044	HNF4A_NR2F1,2.p2	AK005102|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AK164683|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	AK158172|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163183|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163184|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1	NM_001163185|Plekhb1|27276|pleckstrin homology domain containing, family B (evectins) member 1
mm9_v1_chr15_+_82176533_82176625	3.42147	HNF4A_NR2F1,2.p2	
mm9_v1_chr7_+_135047561_135047646	3.41259	HNF4A_NR2F1,2.p2	NM_009739|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150607|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK150723|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK167519|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	AK145479|Bckdk|12041|branched chain ketoacid dehydrogenase kinase	BC046595|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr2_+_4638844_4638934	3.40758	HNF4A_NR2F1,2.p2	AK053896|Bend7|209645|BEN domain containing 7	NM_001190400|Bend7|209645|BEN domain containing 7	NM_178663|Bend7|209645|BEN domain containing 7	AK042822|Bend7|209645|BEN domain containing 7
mm9_v1_chr18_+_38611212_38611226	3.40067	HNF4A_NR2F1,2.p2	
mm9_v1_chr6_-_85781824_85781883	3.39236	HNF4A_NR2F1,2.p2	AK002784|Nat8|68396|N-acetyltransferase 8 (GCN5-related, putative)	AF163317|Nat8|68396|N-acetyltransferase 8 (GCN5-related, putative)	NM_023455|Nat8|68396|N-acetyltransferase 8 (GCN5-related, putative)
mm9_v1_chr8_+_93594015_93594067	3.38532	HNF4A_NR2F1,2.p2	U47333|Rbl2|19651|retinoblastoma-like 2	U36799|Rbl2|19651|retinoblastoma-like 2	U50850|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr17_-_27076365_27076517	3.38369	HNF4A_NR2F1,2.p2	AK007580|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK007912|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK145185|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC024422|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	BC028531|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	NM_026307|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK003381|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	NM_026948|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK003647|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK004197|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK159336|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK002828|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)	AK012608|Cuta|67675|cutA divalent cation tolerance homolog (E. coli)
mm9_v1_chr2_+_174153230_174153414	3.37683	HNF4A_NR2F1,2.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr19_+_46227031_46227037	3.37425	HNF4A_NR2F1,2.p2	AK143358|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr4_-_96220294_96220351	3.3725	HNF4A_NR2F1,2.p2	AK045421|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	BC050832|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK033614|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	NM_010008|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6	AK084025|Cyp2j6|13110|cytochrome P450, family 2, subfamily j, polypeptide 6
mm9_v1_chr7_+_53128141_53128380	3.35142	HNF4A_NR2F1,2.p2	AK078785|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AK013118|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AJ278132|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	NM_133950|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	BC011370|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	AY027435|Kdelr1|68137|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm9_v1_chr13_-_55528131_55528182	3.34718	HNF4A_NR2F1,2.p2	BC037085|F12|58992|coagulation factor XII (Hageman factor)	X99571|F12|58992|coagulation factor XII (Hageman factor)	BC049867|F12|58992|coagulation factor XII (Hageman factor)	BC057921|F12|58992|coagulation factor XII (Hageman factor)	NM_021489|F12|58992|coagulation factor XII (Hageman factor)
mm9_v1_chr11_+_115836022_115836269	3.34429	HNF4A_NR2F1,2.p2	L04678|Itgb4|192897|integrin beta 4	AK147424|Itgb4|192897|integrin beta 4	NM_001005608|Itgb4|192897|integrin beta 4	NM_133663|Itgb4|192897|integrin beta 4	AK048888|Itgb4|192897|integrin beta 4
mm9_v1_chr5_-_87998014_87998030	3.33833	HNF4A_NR2F1,2.p2	AK160466|Sult1d1|53315|sulfotransferase family 1D, member 1	NM_016771|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr7_-_28013283_28013416	3.33707	HNF4A_NR2F1,2.p2	AK033605|Itpkc|233011|inositol 1,4,5-trisphosphate 3-kinase C
mm9_v1_chr7_-_26175113_26175168	3.33553	HNF4A_NR2F1,2.p2	BC021642|Lipe|16890|lipase, hormone sensitive	AK169858|Lipe|16890|lipase, hormone sensitive	NM_001039507|Lipe|16890|lipase, hormone sensitive
mm9_v1_chr7_+_71537652_71537662	3.32977	HNF4A_NR2F1,2.p2	BC038157|Mcee|73724|methylmalonyl CoA epimerase	NM_028626|Mcee|73724|methylmalonyl CoA epimerase	AK003511|Mcee|73724|methylmalonyl CoA epimerase
mm9_v1_chr9_+_50561121_50561170	3.32923	HNF4A_NR2F1,2.p2	BC010768|Cryab|12955|crystallin, alpha B
mm9_v1_chr19_-_6015125_6015246	3.32733	HNF4A_NR2F1,2.p2	AF021847|Capn1|12333|calpain 1	BC026138|Capn1|12333|calpain 1	BC050276|Capn1|12333|calpain 1	AK088547|Capn1|12333|calpain 1	AK149706|Capn1|12333|calpain 1	AK150084|Capn1|12333|calpain 1	AK168063|Capn1|12333|calpain 1	AK160940|Capn1|12333|calpain 1	AK165258|Capn1|12333|calpain 1	NM_007600|Capn1|12333|calpain 1
mm9_v1_chr19_+_6047024_6047144	3.32482	HNF4A_NR2F1,2.p2	BC080722|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin	AK143720|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin	AK172097|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin	BC042199|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin	AK004688|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin	BC046829|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin	NM_001164709|Syvn1|74126|synovial apoptosis inhibitor 1, synoviolin
mm9_v1_chr14_-_73768214_73768311	3.32476	HNF4A_NR2F1,2.p2	AK198503|Itm2b|16432|integral membrane protein 2B	AK197360|Itm2b|16432|integral membrane protein 2B	AB030204|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr10_+_127759512_127759609	3.31987	HNF4A_NR2F1,2.p2	AF186115|Cnpy2|56530|canopy 2 homolog (zebrafish)	NM_019953|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK150953|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr14_-_56519012_56519108	3.30404	HNF4A_NR2F1,2.p2	AK009339|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	BC087941|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	AK049709|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1	NM_001082975|Sdr39u1|654795|short chain dehydrogenase/reductase family 39U, member 1
mm9_v1_chr12_-_105011795_105011804	3.30258	HNF4A_NR2F1,2.p2	AK002537|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr2_-_154429368_154429412	3.29909	HNF4A_NR2F1,2.p2	BC025796|Pxmp4|59038|peroxisomal membrane protein 4	AJ271476|Pxmp4|59038|peroxisomal membrane protein 4	AK143785|Pxmp4|59038|peroxisomal membrane protein 4	AK156743|Pxmp4|59038|peroxisomal membrane protein 4	AK050647|Pxmp4|59038|peroxisomal membrane protein 4	NM_021534|Pxmp4|59038|peroxisomal membrane protein 4
mm9_v1_chr18_-_61885933_61886002	3.29852	HNF4A_NR2F1,2.p2	AF041060|Grpel2|17714|GrpE-like 2, mitochondrial	BC094583|Grpel2|17714|GrpE-like 2, mitochondrial	BC068232|Grpel2|17714|GrpE-like 2, mitochondrial	AK012634|Grpel2|17714|GrpE-like 2, mitochondrial	AK134455|Grpel2|17714|GrpE-like 2, mitochondrial	AK003011|Grpel2|17714|GrpE-like 2, mitochondrial	AK082983|Grpel2|17714|GrpE-like 2, mitochondrial	BC120747|Grpel2|17714|GrpE-like 2, mitochondrial	AK145493|Grpel2|17714|GrpE-like 2, mitochondrial	NM_021296|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr1_-_173165051_173165079	3.28206	HNF4A_NR2F1,2.p2	
mm9_v1_chr8_+_93594007_93594009	3.28186	HNF4A_NR2F1,2.p2	BC020528|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr11_-_120421805_120421818	3.27622	HNF4A_NR2F1,2.p2	AK196256|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide	AK201336|P4hb|18453|prolyl 4-hydroxylase, beta polypeptide
mm9_v1_chr9_-_34924338_34924474	3.27226	HNF4A_NR2F1,2.p2	AB061305|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	BC011121|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	D28941|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	BC050773|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	NM_009178|St3gal4|20443|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
mm9_v1_chr15_-_77363703_77363744	3.27085	HNF4A_NR2F1,2.p2	BC139148|Apol7c|108956|apolipoprotein L 7c	BC139149|Apol7c|108956|apolipoprotein L 7c	AK075855|Apol7c|108956|apolipoprotein L 7c	NM_175391|Apol7c|108956|apolipoprotein L 7c
mm9_v1_chr2_-_28418881_28418904	3.26759	HNF4A_NR2F1,2.p2	NM_009885|Cel|12613|carboxyl ester lipase	U33169|Cel|12613|carboxyl ester lipase	U37386|Cel|12613|carboxyl ester lipase	BC006872|Cel|12613|carboxyl ester lipase	AK131818|Cel|12613|carboxyl ester lipase	AK131824|Cel|12613|carboxyl ester lipase	AK019028|Cel|12613|carboxyl ester lipase
mm9_v1_chr16_+_18248964_18249010	3.25934	HNF4A_NR2F1,2.p2	AK017819|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK134368|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001080999|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001081000|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_001195205|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
mm9_v1_chr11_-_83392129_83392139	3.24906	HNF4A_NR2F1,2.p2	NM_011338|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr19_+_46227052_46227083	3.24659	HNF4A_NR2F1,2.p2	BC082336|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	AK019933|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	BC011335|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr14_-_31736727_31736772	3.24569	HNF4A_NR2F1,2.p2	X70393|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	BC015276|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	AK146700|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3	NM_008407|Itih3|16426|inter-alpha trypsin inhibitor, heavy chain 3
mm9_v1_chr1_-_182175890_182176045	3.24038	HNF4A_NR2F1,2.p2	AF038935|Psen2|19165|presenilin 2	U57324|Psen2|19165|presenilin 2	NM_011183|Psen2|19165|presenilin 2
mm9_v1_chr17_-_26227187_26227280	3.23772	HNF4A_NR2F1,2.p2	AK149270|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal	AK162961|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
mm9_v1_chr12_+_110782654_110782752	3.23743	HNF4A_NR2F1,2.p2	BC024818|Meg3|17263|maternally expressed 3
mm9_v1_chr12_+_53604952_53605039	3.23278	HNF4A_NR2F1,2.p2	AK131622|Arhgap5|11855|Rho GTPase activating protein 5	AK041016|Arhgap5|11855|Rho GTPase activating protein 5
mm9_v1_chr14_-_35315715_35315752	3.23265	HNF4A_NR2F1,2.p2	NM_009758|Bmpr1a|12166|bone morphogenetic protein receptor, type 1A	AK132051|Bmpr1a|12166|bone morphogenetic protein receptor, type 1A
mm9_v1_chr9_-_63247025_63247103	3.23069	HNF4A_NR2F1,2.p2	BC100363|2300009A05Rik|69478|RIKEN cDNA 2300009A05 gene	BC116242|2300009A05Rik|69478|RIKEN cDNA 2300009A05 gene	BC116243|2300009A05Rik|69478|RIKEN cDNA 2300009A05 gene	AK054471|2300009A05Rik|69478|RIKEN cDNA 2300009A05 gene	AK009046|2300009A05Rik|69478|RIKEN cDNA 2300009A05 gene	AK158428|2300009A05Rik|69478|RIKEN cDNA 2300009A05 gene	NM_027090|2300009A05Rik|69478|RIKEN cDNA 2300009A05 gene
mm9_v1_chr2_+_91097485_91097485	3.22247	HNF4A_NR2F1,2.p2	AK049166|Pacsin3|80708|protein kinase C and casein kinase substrate in neurons 3	NM_028733|Pacsin3|80708|protein kinase C and casein kinase substrate in neurons 3
mm9_v1_chr2_-_154233754_154233847	3.21682	HNF4A_NR2F1,2.p2	BC018546|Snta1|20648|syntrophin, acidic 1	U00677|Snta1|20648|syntrophin, acidic 1	AK137379|Snta1|20648|syntrophin, acidic 1	NM_009228|Snta1|20648|syntrophin, acidic 1
mm9_v1_chr8_-_96536437_96536583	3.21241	HNF4A_NR2F1,2.p2	BC040338|Amfr|23802|autocrine motility factor receptor	BC034538|Amfr|23802|autocrine motility factor receptor	AK038442|Amfr|23802|autocrine motility factor receptor	AK170716|Amfr|23802|autocrine motility factor receptor	AK157327|Amfr|23802|autocrine motility factor receptor	NM_011787|Amfr|23802|autocrine motility factor receptor
mm9_v1_chr17_-_87657365_87657420	3.20276	HNF4A_NR2F1,2.p2	GQ896355|Mcfd2|193813|multiple coagulation factor deficiency 2	GQ896356|Mcfd2|193813|multiple coagulation factor deficiency 2	AK206943|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr9_-_106060406_106060468	3.20207	HNF4A_NR2F1,2.p2	AK052709|Glyctk|235582|glycerate kinase	BC036136|Glyctk|235582|glycerate kinase	BC025935|Glyctk|235582|glycerate kinase	AF455785|Glyctk|235582|glycerate kinase	BC025834|Glyctk|235582|glycerate kinase	BC033063|Glyctk|235582|glycerate kinase	AK049425|Glyctk|235582|glycerate kinase	AK050182|Glyctk|235582|glycerate kinase	NM_001039586|Glyctk|235582|glycerate kinase	NM_174846|Glyctk|235582|glycerate kinase
mm9_v1_chr5_+_53440591_53440620	3.18893	HNF4A_NR2F1,2.p2	AK164786|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	NM_011402|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK004832|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK145599|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AF081499|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	BC096369|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2
mm9_v1_chr18_-_60872888_60873042	3.18375	HNF4A_NR2F1,2.p2	AF049894|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AF074926|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC066098|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	BC079561|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	NM_008306|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr15_-_97976050_97976072	3.16738	HNF4A_NR2F1,2.p2	BC025106|Asb8|78541|ankyrin repeat and SOCS box-containing 8	AF398969|Asb8|78541|ankyrin repeat and SOCS box-containing 8	AK021239|Asb8|78541|ankyrin repeat and SOCS box-containing 8
mm9_v1_chr19_-_6996189_6996331	3.16269	HNF4A_NR2F1,2.p2	BC034165|Esrra|26379|estrogen related receptor, alpha	BC138586|Esrra|26379|estrogen related receptor, alpha	BC171958|Esrra|26379|estrogen related receptor, alpha	U85259|Esrra|26379|estrogen related receptor, alpha	AK019222|Esrra|26379|estrogen related receptor, alpha	AK046588|Esrra|26379|estrogen related receptor, alpha	AK156371|Esrra|26379|estrogen related receptor, alpha	NM_007953|Esrra|26379|estrogen related receptor, alpha	BC039774|Esrra|26379|estrogen related receptor, alpha
mm9_v1_chr5_+_93000562_93000564	3.16234	HNF4A_NR2F1,2.p2	AK050399|Fam47e|384198|family with sequence similarity 47, member E	AK144479|Fam47e|384198|family with sequence similarity 47, member E	NM_001033478|Fam47e|384198|family with sequence similarity 47, member E	NM_001170571|Fam47e|384198|family with sequence similarity 47, member E
mm9_v1_chr2_-_73749317_73749415	3.15832	HNF4A_NR2F1,2.p2	AK077930|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	NM_175015|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	AK087955|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)
mm9_v1_chr7_+_135047661_135047661	3.15332	HNF4A_NR2F1,2.p2	AK075602|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr19_+_46227029_46227030	3.15049	HNF4A_NR2F1,2.p2	AK039570|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr15_-_82991286_82991340	3.14721	HNF4A_NR2F1,2.p2	AK178355|Cyb5r3|109754|cytochrome b5 reductase 3	AK181262|Cyb5r3|109754|cytochrome b5 reductase 3	AK183532|Cyb5r3|109754|cytochrome b5 reductase 3	AK187743|Cyb5r3|109754|cytochrome b5 reductase 3	AK190014|Cyb5r3|109754|cytochrome b5 reductase 3	AK211940|Cyb5r3|109754|cytochrome b5 reductase 3	AK211950|Cyb5r3|109754|cytochrome b5 reductase 3	AK213922|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr1_-_157264398_157264577	3.14239	HNF4A_NR2F1,2.p2	AK147403|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC153872|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AF114753|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	BC075721|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	AK141660|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1	NM_011273|Xpr1|19775|xenotropic and polytropic retrovirus receptor 1
mm9_v1_chr8_+_93594010_93594012	3.13966	HNF4A_NR2F1,2.p2	AK160027|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr6_+_38059352_38059360	3.13632	HNF4A_NR2F1,2.p2	AK021320|Tmem213|77522|transmembrane protein 213	NM_029921|Tmem213|77522|transmembrane protein 213	BC104374|Tmem213|77522|transmembrane protein 213	BC104375|Tmem213|77522|transmembrane protein 213	BC119477|Tmem213|77522|transmembrane protein 213
mm9_v1_chr19_-_37338378_37338600	3.13575	HNF4A_NR2F1,2.p2	AK016444|4931408D14Rik|77059|RIKEN cDNA 4931408D14 gene	AK040817|4931408D14Rik|77059|RIKEN cDNA 4931408D14 gene	AK168860|4931408D14Rik|77059|RIKEN cDNA 4931408D14 gene
mm9_v1_chr15_-_58010344_58010436	3.13485	HNF4A_NR2F1,2.p2	
mm9_v1_chr1_+_7079042_7079277	3.12687	HNF4A_NR2F1,2.p2	AK079468|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK166166|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK168705|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	BC110360|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK134223|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK168606|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	BC019193|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK187882|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK040848|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK145008|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	AK166593|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr19_-_44181897_44181978	3.10968	HNF4A_NR2F1,2.p2	AK035326|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	U12473|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK150039|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK165275|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK018671|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155328|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	BC018243|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155393|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK164236|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_001162410|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_007700|Chuk|12675|conserved helix-loop-helix ubiquitous kinase
mm9_v1_chr6_+_41471774_41471798	3.10791	HNF4A_NR2F1,2.p2	NM_009430|Prss2|22072|protease, serine, 2	AK003082|Prss2|22072|protease, serine, 2	X04574|Prss2|22072|protease, serine, 2	BC064796|Prss2|22072|protease, serine, 2
mm9_v1_chr5_+_114453834_114453892	3.10335	HNF4A_NR2F1,2.p2	NM_010018|Dao|13142|D-amino acid oxidase	AK134813|Dao|13142|D-amino acid oxidase	M32299|Dao|13142|D-amino acid oxidase	BC015269|Dao|13142|D-amino acid oxidase
mm9_v1_chr6_-_124586102_124586102	3.10319	HNF4A_NR2F1,2.p2	AF459020|Gm5077|317677|predicted gene 5077	NM_173864|Gm5077|317677|predicted gene 5077
mm9_v1_chr6_-_4697009_4697210	3.10018	HNF4A_NR2F1,2.p2	AF103877|Sgce|20392|sarcoglycan, epsilon	AB200281|Sgce|20392|sarcoglycan, epsilon	AB200282|Sgce|20392|sarcoglycan, epsilon	AK076102|Sgce|20392|sarcoglycan, epsilon	AB117975|Sgce|20392|sarcoglycan, epsilon	AF031919|Sgce|20392|sarcoglycan, epsilon	AK132210|Sgce|20392|sarcoglycan, epsilon	BC012665|Sgce|20392|sarcoglycan, epsilon	NM_001130188|Sgce|20392|sarcoglycan, epsilon	NM_001130189|Sgce|20392|sarcoglycan, epsilon	NM_001130190|Sgce|20392|sarcoglycan, epsilon	NM_001130191|Sgce|20392|sarcoglycan, epsilon	NM_011360|Sgce|20392|sarcoglycan, epsilon
mm9_v1_chr14_+_76888242_76888347	3.09678	HNF4A_NR2F1,2.p2	NM_001177751|Tsc22d1|21807|TSC22 domain family, member 1	AK136211|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr17_+_23810567_23810574	3.09602	HNF4A_NR2F1,2.p2	AK013438|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)	NM_181821|Hcfc1r1|353502|host cell factor C1 regulator 1 (XPO1-dependent)
mm9_v1_chr7_+_148401781_148401819	3.08429	HNF4A_NR2F1,2.p2	AK002243|Rassf7|66985|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
mm9_v1_chr3_-_88307253_88307261	3.08204	HNF4A_NR2F1,2.p2	NM_001002011|Lmna|16905|lamin A	NM_001111102|Lmna|16905|lamin A
mm9_v1_chr8_-_87366624_87366670	3.07714	HNF4A_NR2F1,2.p2	X56603|Calr|12317|calreticulin
mm9_v1_chr14_+_63752151_63752250	3.07268	HNF4A_NR2F1,2.p2	M14222|Ctsb|13030|cathepsin B	AK190209|Ctsb|13030|cathepsin B	AK190539|Ctsb|13030|cathepsin B	AK191055|Ctsb|13030|cathepsin B	AK191391|Ctsb|13030|cathepsin B	AK196955|Ctsb|13030|cathepsin B	AK198213|Ctsb|13030|cathepsin B	AK199268|Ctsb|13030|cathepsin B	AK201893|Ctsb|13030|cathepsin B	AK202291|Ctsb|13030|cathepsin B	AK203639|Ctsb|13030|cathepsin B
mm9_v1_chr7_-_13623543_13623681	3.06886	HNF4A_NR2F1,2.p2	NM_001168469|Ube2m|22192|ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast)
mm9_v1_chr3_+_27215949_27216031	3.06592	HNF4A_NR2F1,2.p2	AK153581|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK144931|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK142960|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK157633|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	NM_009425|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	U37522|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC138807|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC138808|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC011469|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10
mm9_v1_chr8_-_3720642_3720662	3.04383	HNF4A_NR2F1,2.p2	BC025069|Clec4g|75863|C-type lectin domain family 4, member g	AK079992|Clec4g|75863|C-type lectin domain family 4, member g	BC087963|Clec4g|75863|C-type lectin domain family 4, member g	NM_029465|Clec4g|75863|C-type lectin domain family 4, member g
mm9_v1_chr4_+_140798798_140798798	3.03976	HNF4A_NR2F1,2.p2	AK031443|Arhgef19|213649|Rho guanine nucleotide exchange factor (GEF) 19	AK053075|Arhgef19|213649|Rho guanine nucleotide exchange factor (GEF) 19	NM_172520|Arhgef19|213649|Rho guanine nucleotide exchange factor (GEF) 19
mm9_v1_chr2_-_90758185_90758286	3.03807	HNF4A_NR2F1,2.p2	BC026750|Ptpmt1|66461|protein tyrosine phosphatase, mitochondrial 1	AK012674|Ptpmt1|66461|protein tyrosine phosphatase, mitochondrial 1	AK014691|Ptpmt1|66461|protein tyrosine phosphatase, mitochondrial 1	AK151972|Ptpmt1|66461|protein tyrosine phosphatase, mitochondrial 1	NM_025576|Ptpmt1|66461|protein tyrosine phosphatase, mitochondrial 1
mm9_v1_chr16_+_48872720_48872733	3.02559	HNF4A_NR2F1,2.p2	NM_181596|Retnlg|245195|resistin like gamma
mm9_v1_chr18_-_35428760_35428768	3.02077	HNF4A_NR2F1,2.p2	AK208966|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	AK206841|Sil1|81500|endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
mm9_v1_chr17_-_87665228_87665308	3.0183	HNF4A_NR2F1,2.p2	AK077139|Mcfd2|193813|multiple coagulation factor deficiency 2	AK141599|Mcfd2|193813|multiple coagulation factor deficiency 2	AF475283|Mcfd2|193813|multiple coagulation factor deficiency 2	AK151803|Mcfd2|193813|multiple coagulation factor deficiency 2	NM_139295|Mcfd2|193813|multiple coagulation factor deficiency 2	NM_176808|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr8_+_13060907_13061026	3.00907	HNF4A_NR2F1,2.p2	AK008819|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	NM_025834|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC024104|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	BC038045|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein	AK005011|Proz|66901|protein Z, vitamin K-dependent plasma glycoprotein
mm9_v1_chr11_-_118263125_118263276	2.99712	HNF4A_NR2F1,2.p2	AK152182|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK155031|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK137836|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	L16894|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	BC090658|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	NM_011150|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	X67809|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK153313|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK153396|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK079915|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK150021|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein
mm9_v1_chr19_-_21547035_21547063	2.98679	HNF4A_NR2F1,2.p2	AF369880|Gda|14544|guanine deaminase	AF369881|Gda|14544|guanine deaminase	AF369882|Gda|14544|guanine deaminase	AF369883|Gda|14544|guanine deaminase	AF369884|Gda|14544|guanine deaminase	BC076583|Gda|14544|guanine deaminase
mm9_v1_chr2_+_30122046_30122048	2.98593	HNF4A_NR2F1,2.p2	AK138607|Phyhd1|227696|phytanoyl-CoA dioxygenase domain containing 1
mm9_v1_chr12_-_105011807_105011857	2.98337	HNF4A_NR2F1,2.p2	NM_009246|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr14_-_9091528_9091534	2.9704	HNF4A_NR2F1,2.p2	NM_053115|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr2_-_38640034_38640034	2.96112	HNF4A_NR2F1,2.p2	NM_001159548|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_001159549|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr3_-_58329780_58329826	2.95444	HNF4A_NR2F1,2.p2	NM_030685|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr2_-_32286633_32286688	2.95263	HNF4A_NR2F1,2.p2	BC066998|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_001164358|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr9_+_96096690_96096766	2.94884	HNF4A_NR2F1,2.p2	AK044784|Tfdp2|211586|transcription factor Dp 2	NM_001184706|Tfdp2|211586|transcription factor Dp 2	NM_001184708|Tfdp2|211586|transcription factor Dp 2	NM_178667|Tfdp2|211586|transcription factor Dp 2	AK029055|Tfdp2|211586|transcription factor Dp 2	AK053881|Tfdp2|211586|transcription factor Dp 2	AK162972|Tfdp2|211586|transcription factor Dp 2	AK079624|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr9_-_106588220_106588290	2.94381	HNF4A_NR2F1,2.p2	BC006608|Tex264|21767|testis expressed gene 264	AK003113|Tex264|21767|testis expressed gene 264	AK159046|Tex264|21767|testis expressed gene 264	NM_001081654|Tex264|21767|testis expressed gene 264
mm9_v1_chr2_-_26789021_26789030	2.93716	HNF4A_NR2F1,2.p2	NM_011512|Surf4|20932|surfeit gene 4
mm9_v1_chr5_-_140290195_140290236	2.9344	HNF4A_NR2F1,2.p2	BC026659|Tmem184a|231832|transmembrane protein 184a	AK050489|Tmem184a|231832|transmembrane protein 184a	NM_001161548|Tmem184a|231832|transmembrane protein 184a
mm9_v1_chr18_-_35786790_35786820	2.92435	HNF4A_NR2F1,2.p2	AF058318|Slc23a1|20522|solute carrier family 23 (nucleobase transporters), member 1	AK085499|Slc23a1|20522|solute carrier family 23 (nucleobase transporters), member 1	BC013528|Slc23a1|20522|solute carrier family 23 (nucleobase transporters), member 1	AK165439|Slc23a1|20522|solute carrier family 23 (nucleobase transporters), member 1
mm9_v1_chr19_-_6986037_6986245	2.91741	HNF4A_NR2F1,2.p2	AK008536|Esrra|26379|estrogen related receptor, alpha	BC052930|Esrra|26379|estrogen related receptor, alpha
mm9_v1_chrX_+_91612471_91612621	2.91622	HNF4A_NR2F1,2.p2	AK002320|Apoo|68316|apolipoprotein O	AK003831|Apoo|68316|apolipoprotein O	BC016557|Apoo|68316|apolipoprotein O	BC107208|Apoo|68316|apolipoprotein O	BC107209|Apoo|68316|apolipoprotein O
mm9_v1_chr12_-_106103285_106103341	2.91595	HNF4A_NR2F1,2.p2	AB047978|Clmn|94040|calmin	AB059643|Clmn|94040|calmin	AB059644|Clmn|94040|calmin	AB059645|Clmn|94040|calmin	AB059646|Clmn|94040|calmin	AB059647|Clmn|94040|calmin	AB059648|Clmn|94040|calmin	NM_001040682|Clmn|94040|calmin	NM_053155|Clmn|94040|calmin
mm9_v1_chr4_-_40883509_40883654	2.90164	HNF4A_NR2F1,2.p2	AK184952|Bag1|12017|BCL2-associated athanogene 1	AK213721|Bag1|12017|BCL2-associated athanogene 1	AK216811|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr6_-_24118065_24118091	2.89872	HNF4A_NR2F1,2.p2	BC040789|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	BC049981|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK019876|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199365|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AF199366|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	AK128899|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_019481|Slc13a1|55961|solute carrier family 13 (sodium/sulfate symporters), member 1
mm9_v1_chr17_-_34740422_34740567	2.89845	HNF4A_NR2F1,2.p2	BC012031|Rnf5|54197|ring finger protein 5	AK012729|Rnf5|54197|ring finger protein 5	AK020514|Rnf5|54197|ring finger protein 5	BC016449|Rnf5|54197|ring finger protein 5	NM_019403|Rnf5|54197|ring finger protein 5	AK019289|Rnf5|54197|ring finger protein 5	AK020515|Rnf5|54197|ring finger protein 5	AK010792|Rnf5|54197|ring finger protein 5
mm9_v1_chr6_+_83299439_83299497	2.89636	HNF4A_NR2F1,2.p2	BC116947|Bola3|78653|bolA-like 3 (E. coli)	BC116949|Bola3|78653|bolA-like 3 (E. coli)	AK131950|Bola3|78653|bolA-like 3 (E. coli)	AK160488|Bola3|78653|bolA-like 3 (E. coli)	AK028102|Bola3|78653|bolA-like 3 (E. coli)	NM_175277|Bola3|78653|bolA-like 3 (E. coli)
mm9_v1_chr3_-_8923789_8923856	2.8953	HNF4A_NR2F1,2.p2	AK088314|Mrps28|66230|mitochondrial ribosomal protein S28	AK011036|Mrps28|66230|mitochondrial ribosomal protein S28	BC028530|Mrps28|66230|mitochondrial ribosomal protein S28	AK005229|Mrps28|66230|mitochondrial ribosomal protein S28	NM_025434|Mrps28|66230|mitochondrial ribosomal protein S28
mm9_v1_chr4_+_21806813_21806887	2.89028	HNF4A_NR2F1,2.p2	BC060960|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK028680|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	NM_172687|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK035318|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK170488|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK166475|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)	AK142287|Coq3|230027|coenzyme Q3 homolog, methyltransferase (yeast)
mm9_v1_chr7_-_31839825_31839873	2.88886	HNF4A_NR2F1,2.p2	BC024671|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_052991|Fxyd1|56188|FXYD domain-containing ion transport regulator 1	NM_194321|Fxyd1|56188|FXYD domain-containing ion transport regulator 1
mm9_v1_chr11_+_67051128_67051361	2.88398	HNF4A_NR2F1,2.p2	DQ066415|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066416|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066417|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AK138608|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	AY963801|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle	DQ066418|Myh4|17884|myosin, heavy polypeptide 4, skeletal muscle
mm9_v1_chr2_-_152422160_152422220	2.86392	HNF4A_NR2F1,2.p2	BC132226|Defb45|433490|defensin beta 45	BC132228|Defb45|433490|defensin beta 45	AY591384|Defb45|433490|defensin beta 45	DQ012038|Defb45|433490|defensin beta 45	AK005919|Defb45|433490|defensin beta 45	NM_001037752|Defb45|433490|defensin beta 45
mm9_v1_chr2_+_76244578_76244594	2.86092	HNF4A_NR2F1,2.p2	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr11_+_69906223_69906270	2.8603	HNF4A_NR2F1,2.p2	X53042|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr4_+_154460679_154460722	2.86012	HNF4A_NR2F1,2.p2	NM_001081100|Morn1|76866|MORN repeat containing 1	BC132619|Morn1|76866|MORN repeat containing 1	BC145744|Morn1|76866|MORN repeat containing 1	AK013714|Morn1|76866|MORN repeat containing 1	AK015161|Morn1|76866|MORN repeat containing 1	AK045316|Morn1|76866|MORN repeat containing 1	AK148312|Morn1|76866|MORN repeat containing 1
mm9_v1_chr10_-_127058199_127058205	2.85598	HNF4A_NR2F1,2.p2	AK078273|Lrp1|16971|low density lipoprotein receptor-related protein 1	NM_008512|Lrp1|16971|low density lipoprotein receptor-related protein 1
mm9_v1_chr1_+_159397295_159397309	2.84341	HNF4A_NR2F1,2.p2	BC057972|BC026585|226527|cDNA sequence BC026585
mm9_v1_chrX_+_97972559_97972657	2.84283	HNF4A_NR2F1,2.p2	NM_001177780|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK159655|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK167365|Dlg3|53310|discs, large homolog 3 (Drosophila)	AK148464|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr3_-_58329639_58329732	2.83501	HNF4A_NR2F1,2.p2	AK167482|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK050508|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150809|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151323|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153056|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153118|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153286|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166052|Serp1|28146|stress-associated endoplasmic reticulum protein 1	BC002114|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151384|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK166004|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150659|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152373|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152882|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153138|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK075776|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK144732|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151669|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152583|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK153415|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169049|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK167952|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150005|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150025|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150368|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150770|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151853|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152383|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168569|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168754|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168947|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AB041655|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK032680|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK148485|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150428|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK150714|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK151456|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152636|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152806|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK152996|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK159271|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK161595|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK168046|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK169175|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK170734|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK002653|Serp1|28146|stress-associated endoplasmic reticulum protein 1	AK149786|Serp1|28146|stress-associated endoplasmic reticulum protein 1
mm9_v1_chr2_+_34627607_34627658	2.82884	HNF4A_NR2F1,2.p2	NM_001163434|Hspa5|14828|heat shock protein 5	NM_022310|Hspa5|14828|heat shock protein 5	AK077463|Hspa5|14828|heat shock protein 5	AK146647|Hspa5|14828|heat shock protein 5	AK148539|Hspa5|14828|heat shock protein 5	AK149447|Hspa5|14828|heat shock protein 5	AK151647|Hspa5|14828|heat shock protein 5	AK151806|Hspa5|14828|heat shock protein 5	AK152958|Hspa5|14828|heat shock protein 5	AK160821|Hspa5|14828|heat shock protein 5	AK168012|Hspa5|14828|heat shock protein 5	AK169034|Hspa5|14828|heat shock protein 5	AK004578|Hspa5|14828|heat shock protein 5	AK076079|Hspa5|14828|heat shock protein 5	AK144650|Hspa5|14828|heat shock protein 5	AK144742|Hspa5|14828|heat shock protein 5	AK152020|Hspa5|14828|heat shock protein 5	AK159719|Hspa5|14828|heat shock protein 5	AK166207|Hspa5|14828|heat shock protein 5	AK166739|Hspa5|14828|heat shock protein 5	AK167011|Hspa5|14828|heat shock protein 5	AK152521|Hspa5|14828|heat shock protein 5	AK168230|Hspa5|14828|heat shock protein 5	BC050927|Hspa5|14828|heat shock protein 5
mm9_v1_chr18_+_6765174_6765262	2.82649	HNF4A_NR2F1,2.p2	AK154920|Rab18|19330|RAB18, member RAS oncogene family	AK143673|Rab18|19330|RAB18, member RAS oncogene family	AK140901|Rab18|19330|RAB18, member RAS oncogene family	AK045514|Rab18|19330|RAB18, member RAS oncogene family	NM_181070|Rab18|19330|RAB18, member RAS oncogene family	BC056351|Rab18|19330|RAB18, member RAS oncogene family	AK146177|Rab18|19330|RAB18, member RAS oncogene family	AK146397|Rab18|19330|RAB18, member RAS oncogene family	L04966|Rab18|19330|RAB18, member RAS oncogene family	AB232612|Rab18|19330|RAB18, member RAS oncogene family	M79308|Rab18|19330|RAB18, member RAS oncogene family	X80333|Rab18|19330|RAB18, member RAS oncogene family
mm9_v1_chr11_+_105846442_105846551	2.82562	HNF4A_NR2F1,2.p2	BC052531|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr8_-_95603838_95603915	2.8247	HNF4A_NR2F1,2.p2	NM_001081372|Ces1b|382044|carboxylesterase 1B
mm9_v1_chr6_-_115542515_115542614	2.81837	HNF4A_NR2F1,2.p2	AK028760|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene	AK011120|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene	NM_001101431|2510049J12Rik|70291|RIKEN cDNA 2510049J12 gene
mm9_v1_chr9_-_55360042_55360055	2.81825	HNF4A_NR2F1,2.p2	AK028118|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	NM_145615|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chr7_-_109069245_109069287	2.81547	HNF4A_NR2F1,2.p2	EU627089|Lrrc51|69358|leucine rich repeat containing 51	EU627090|Lrrc51|69358|leucine rich repeat containing 51	NM_001162974|Lrrc51|69358|leucine rich repeat containing 51
mm9_v1_chr8_+_108424267_108424373	2.81464	HNF4A_NR2F1,2.p2	AK153861|Pskh1|244631|protein serine kinase H1	AK053397|Pskh1|244631|protein serine kinase H1	AK154570|Pskh1|244631|protein serine kinase H1	AK166338|Pskh1|244631|protein serine kinase H1	BC050128|Pskh1|244631|protein serine kinase H1	NM_173432|Pskh1|244631|protein serine kinase H1
mm9_v1_chr7_-_30033483_30033500	2.81229	HNF4A_NR2F1,2.p2	NM_028179|2200002D01Rik|72275|RIKEN cDNA 2200002D01 gene
mm9_v1_chr5_-_122907269_122907331	2.80345	HNF4A_NR2F1,2.p2	AK195483|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK198267|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK202908|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	AK209825|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	BC022584|Atp2a2|11938|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm9_v1_chr16_+_20674298_20674336	2.80116	HNF4A_NR2F1,2.p2	BC021441|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chr9_-_106587984_106588005	2.78997	HNF4A_NR2F1,2.p2	AK009326|Tex264|21767|testis expressed gene 264	NM_011573|Tex264|21767|testis expressed gene 264	X80428|Tex264|21767|testis expressed gene 264
mm9_v1_chr14_+_56097682_56097776	2.78867	HNF4A_NR2F1,2.p2	AB045132|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK018788|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK146988|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	BC003484|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4
mm9_v1_chr2_-_73224394_73224535	2.7863	HNF4A_NR2F1,2.p2	AK090081|Gpr155|68526|G protein-coupled receptor 155	BC115698|Gpr155|68526|G protein-coupled receptor 155	AK089436|Gpr155|68526|G protein-coupled receptor 155	HM161763|Gpr155|68526|G protein-coupled receptor 155	HM161764|Gpr155|68526|G protein-coupled receptor 155	HM161765|Gpr155|68526|G protein-coupled receptor 155	HM161766|Gpr155|68526|G protein-coupled receptor 155	NM_001080707|Gpr155|68526|G protein-coupled receptor 155	NM_001190297|Gpr155|68526|G protein-coupled receptor 155
mm9_v1_chr11_+_68781623_68781690	2.78478	HNF4A_NR2F1,2.p2	AK171131|Slc25a35|71998|solute carrier family 25, member 35	AK007453|Slc25a35|71998|solute carrier family 25, member 35	NM_028048|Slc25a35|71998|solute carrier family 25, member 35	AK157873|Slc25a35|71998|solute carrier family 25, member 35	AK035739|Slc25a35|71998|solute carrier family 25, member 35	BC019996|Slc25a35|71998|solute carrier family 25, member 35
mm9_v1_chr11_+_75492764_75492890	2.78377	HNF4A_NR2F1,2.p2	AK154987|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK028179|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK163291|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK152549|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK088519|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK052795|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK139089|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK036905|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK028488|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	NM_133656|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK161356|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AK161761|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	BC012216|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	BC031149|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	S72408|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)	AF239673|Crk|12928|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm9_v1_chr10_-_116333934_116333934	2.78036	HNF4A_NR2F1,2.p2	AK144383|Gm239|237558|predicted gene 239	AK144411|Gm239|237558|predicted gene 239	NM_001033333|Gm239|237558|predicted gene 239
mm9_v1_chr17_+_44325664_44325680	2.77534	HNF4A_NR2F1,2.p2	AK156849|Clic5|224796|chloride intracellular channel 5
mm9_v1_chr2_+_90780614_90780617	2.76541	HNF4A_NR2F1,2.p2	NM_017368|Celf1|13046|CUGBP, Elav-like family member 1	NM_198683|Celf1|13046|CUGBP, Elav-like family member 1
mm9_v1_chr1_-_174221511_174221528	2.74375	HNF4A_NR2F1,2.p2	BC041774|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm9_v1_chr8_-_95721654_95721683	2.74365	HNF4A_NR2F1,2.p2	AB023631|Ces1d|104158|carboxylesterase 1D	AF378751|Ces1d|104158|carboxylesterase 1D	AK078879|Ces1d|104158|carboxylesterase 1D
mm9_v1_chr1_-_174228105_174228194	2.74047	HNF4A_NR2F1,2.p2	BC036127|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK129212|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK147331|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK148775|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK161840|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK168703|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK052863|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK137602|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK164509|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	NM_178405|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm9_v1_chr8_+_116657473_116657573	2.74	HNF4A_NR2F1,2.p2	AK088191|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	NM_024437|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	NM_024446|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AF338424|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK004924|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	BC069843|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK011172|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	BC033046|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7	AK008824|Nudt7|67528|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm9_v1_chr6_-_87739476_87739534	2.73774	HNF4A_NR2F1,2.p2	BC059103|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr6_+_90283246_90283309	2.73742	HNF4A_NR2F1,2.p2	AK149464|Uroc1|243537|urocanase domain containing 1	NM_144940|Uroc1|243537|urocanase domain containing 1	BC022133|Uroc1|243537|urocanase domain containing 1
mm9_v1_chr7_-_20218888_20218906	2.73474	HNF4A_NR2F1,2.p2	
mm9_v1_chr2_-_164630347_164630363	2.72633	HNF4A_NR2F1,2.p2	AK033724|Acot8|170789|acyl-CoA thioesterase 8	BC005792|Acot8|170789|acyl-CoA thioesterase 8	AK151924|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr4_+_43644806_43644806	2.7224	HNF4A_NR2F1,2.p2	BC042470|Npr2|230103|natriuretic peptide receptor 2	NM_173788|Npr2|230103|natriuretic peptide receptor 2
mm9_v1_chr19_+_10116104_10116185	2.71576	HNF4A_NR2F1,2.p2	BC071266|Fads3|60527|fatty acid desaturase 3	AK154534|Fads3|60527|fatty acid desaturase 3	AK029318|Fads3|60527|fatty acid desaturase 3	AK080414|Fads3|60527|fatty acid desaturase 3
mm9_v1_chr2_+_131387349_131387488	2.70348	HNF4A_NR2F1,2.p2	
mm9_v1_chr12_+_113052357_113052382	2.69831	HNF4A_NR2F1,2.p2	AK155300|Zfyve21|68520|zinc finger, FYVE domain containing 21
mm9_v1_chr1_+_168060558_168060597	2.69154	HNF4A_NR2F1,2.p2	AK008784|Gpa33|59290|glycoprotein A33 (transmembrane)	AF247659|Gpa33|59290|glycoprotein A33 (transmembrane)	NM_021610|Gpa33|59290|glycoprotein A33 (transmembrane)	BC008528|Gpa33|59290|glycoprotein A33 (transmembrane)
mm9_v1_chr9_+_80012873_80012911	2.68351	HNF4A_NR2F1,2.p2	AK135310|Myo6|17920|myosin VI	U49739|Myo6|17920|myosin VI
mm9_v1_chr11_-_88816679_88816773	2.65684	HNF4A_NR2F1,2.p2	AK050181|Scpep1|74617|serine carboxypeptidase 1	AK153485|Scpep1|74617|serine carboxypeptidase 1	BC021399|Scpep1|74617|serine carboxypeptidase 1	AF330052|Scpep1|74617|serine carboxypeptidase 1	AK153225|Scpep1|74617|serine carboxypeptidase 1	BC004847|Scpep1|74617|serine carboxypeptidase 1	AK014680|Scpep1|74617|serine carboxypeptidase 1	NM_029023|Scpep1|74617|serine carboxypeptidase 1
mm9_v1_chr6_+_113433408_113433466	2.65512	HNF4A_NR2F1,2.p2	AK042344|Creld1|171508|cysteine-rich with EGF-like domains 1	AK077726|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr8_+_46744023_46744252	2.64311	HNF4A_NR2F1,2.p2	AK079130|Sorbs2|234214|sorbin and SH3 domain containing 2	AK140498|Sorbs2|234214|sorbin and SH3 domain containing 2	AK050951|Sorbs2|234214|sorbin and SH3 domain containing 2	BC039163|Sorbs2|234214|sorbin and SH3 domain containing 2
mm9_v1_chr9_+_98390955_98390986	2.63664	HNF4A_NR2F1,2.p2	NM_009034|Rbp2|19660|retinol binding protein 2, cellular	AK003312|Rbp2|19660|retinol binding protein 2, cellular	X74154|Rbp2|19660|retinol binding protein 2, cellular	BC125551|Rbp2|19660|retinol binding protein 2, cellular	BC125553|Rbp2|19660|retinol binding protein 2, cellular
mm9_v1_chr8_+_74066795_74066869	2.62785	HNF4A_NR2F1,2.p2	BC020119|Fam125a|73711|family with sequence similarity 125, member A	NM_028617|Fam125a|73711|family with sequence similarity 125, member A	BC087734|Fam125a|73711|family with sequence similarity 125, member A	AK003644|Fam125a|73711|family with sequence similarity 125, member A	BC027419|Fam125a|73711|family with sequence similarity 125, member A
mm9_v1_chr3_+_95697820_95698061	2.62609	HNF4A_NR2F1,2.p2	AK148400|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC057865|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	AK152334|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC012406|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146104|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC024111|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146134|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)
mm9_v1_chr8_+_93593971_93593997	2.62492	HNF4A_NR2F1,2.p2	AK155256|Rbl2|19651|retinoblastoma-like 2	NM_011250|Rbl2|19651|retinoblastoma-like 2	AK142172|Rbl2|19651|retinoblastoma-like 2
mm9_v1_chr10_-_80363493_80363567	2.61604	HNF4A_NR2F1,2.p2	AK009041|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK013230|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK003054|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK009152|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	AK088984|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	BC011436|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr1_-_12980994_12981257	2.61123	HNF4A_NR2F1,2.p2	BC117943|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	BC117944|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK048882|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK041736|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	NM_172841|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1	AK028758|Slco5a1|240726|solute carrier organic anion transporter family, member 5A1
mm9_v1_chr7_+_19661548_19661579	2.60644	HNF4A_NR2F1,2.p2	NM_010058|Dmwd|13401|dystrophia myotonica-containing WD repeat motif
mm9_v1_chr13_+_49282844_49282955	2.60432	HNF4A_NR2F1,2.p2	AK159111|Ninj1|18081|ninjurin 1	AK077602|Ninj1|18081|ninjurin 1	AK171973|Ninj1|18081|ninjurin 1	AK160045|Ninj1|18081|ninjurin 1	AK155741|Ninj1|18081|ninjurin 1	BC118937|Ninj1|18081|ninjurin 1	NM_013610|Ninj1|18081|ninjurin 1	U91513|Ninj1|18081|ninjurin 1	BC049600|Ninj1|18081|ninjurin 1
mm9_v1_chr14_+_55059217_55059253	2.59976	HNF4A_NR2F1,2.p2	AY622974|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)
mm9_v1_chr4_+_155079379_155079488	2.59954	HNF4A_NR2F1,2.p2	AK019168|Ssu72|68991|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm9_v1_chr19_+_55816320_55816547	2.59408	HNF4A_NR2F1,2.p2	AK132465|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AK035059|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AF107298|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr16_+_18070202_18070305	2.592	HNF4A_NR2F1,2.p2	
mm9_v1_chr16_+_18249036_18249160	2.5917	HNF4A_NR2F1,2.p2	AK146391|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC046976|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC027431|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK034102|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK080170|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK133844|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151422|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK153190|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK169240|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK150482|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151311|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151725|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK151778|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152055|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152201|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152363|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152548|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK152903|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK153043|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC038486|Trmt2a|15547|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
mm9_v1_chr1_+_59543450_59543567	2.59138	HNF4A_NR2F1,2.p2	
mm9_v1_chr2_+_158328317_158328347	2.58704	HNF4A_NR2F1,2.p2	AY092026|Adig|246747|adipogenin	NM_145635|Adig|246747|adipogenin
mm9_v1_chr6_+_83007837_83007837	2.58207	HNF4A_NR2F1,2.p2	BC075680|Dqx1|93838|DEAQ RNA-dependent ATPase	NM_033606|Dqx1|93838|DEAQ RNA-dependent ATPase
mm9_v1_chr7_+_134856200_134856275	2.57923	HNF4A_NR2F1,2.p2	NM_007795|Ctf1|13019|cardiotrophin 1	U18366|Ctf1|13019|cardiotrophin 1	BC024381|Ctf1|13019|cardiotrophin 1
mm9_v1_chr2_-_155949753_155949765	2.57226	HNF4A_NR2F1,2.p2	AK211463|Nfs1|18041|nitrogen fixation gene 1 (S. cerevisiae)
mm9_v1_chr9_+_50561092_50561116	2.57126	HNF4A_NR2F1,2.p2	AK146556|Cryab|12955|crystallin, alpha B
mm9_v1_chr8_+_107355500_107355543	2.57074	HNF4A_NR2F1,2.p2	BC015286|Ces2b|234669|carboxyesterase 2B	BC044835|Ces2b|234669|carboxyesterase 2B	BC058815|Ces2b|234669|carboxyesterase 2B	NM_198171|Ces2b|234669|carboxyesterase 2B
mm9_v1_chr3_+_104667931_104668032	2.57019	HNF4A_NR2F1,2.p2	BC145950|St7l|229681|suppression of tumorigenicity 7-like	AK144075|St7l|229681|suppression of tumorigenicity 7-like	AK148099|St7l|229681|suppression of tumorigenicity 7-like	AK033865|St7l|229681|suppression of tumorigenicity 7-like	BC058781|St7l|229681|suppression of tumorigenicity 7-like	BC107394|St7l|229681|suppression of tumorigenicity 7-like	NM_153091|St7l|229681|suppression of tumorigenicity 7-like	AB084518|St7l|229681|suppression of tumorigenicity 7-like	BC024473|St7l|229681|suppression of tumorigenicity 7-like
mm9_v1_chr7_-_106501584_106501610	2.56564	HNF4A_NR2F1,2.p2	AK168870|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	X60676|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm9_v1_chr12_+_85626260_85626364	2.5567	HNF4A_NR2F1,2.p2	NM_029880|Ptgr2|77219|prostaglandin reductase 2	BC021466|Ptgr2|77219|prostaglandin reductase 2	AK040396|Ptgr2|77219|prostaglandin reductase 2	AK020666|Ptgr2|77219|prostaglandin reductase 2	AK036168|Ptgr2|77219|prostaglandin reductase 2	AK041027|Ptgr2|77219|prostaglandin reductase 2	AK033693|Ptgr2|77219|prostaglandin reductase 2	AK159187|Ptgr2|77219|prostaglandin reductase 2	AK159932|Ptgr2|77219|prostaglandin reductase 2	AK021033|Ptgr2|77219|prostaglandin reductase 2	AK145232|Ptgr2|77219|prostaglandin reductase 2	AK168895|Ptgr2|77219|prostaglandin reductase 2	AK007522|Ptgr2|77219|prostaglandin reductase 2
mm9_v1_chr3_-_116671573_116671671	2.55624	HNF4A_NR2F1,2.p2	AF263246|Palmd|114301|palmdelphin	AL391037|Palmd|114301|palmdelphin	AJ312215|Palmd|114301|palmdelphin	AK171869|Palmd|114301|palmdelphin	BC010193|Palmd|114301|palmdelphin	AK043695|Palmd|114301|palmdelphin	AK014531|Palmd|114301|palmdelphin
mm9_v1_chr2_-_91035226_91035272	2.55186	HNF4A_NR2F1,2.p2	AJ132601|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3	AY195870|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3	AY195871|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3	NM_001177730|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3
mm9_v1_chr14_+_34736806_34736957	2.55061	HNF4A_NR2F1,2.p2	L42114|Gdf10|14560|growth differentiation factor 10	S82648|Gdf10|14560|growth differentiation factor 10
mm9_v1_chr11_-_83391984_83392037	2.54196	HNF4A_NR2F1,2.p2	AF128195|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128196|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128197|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128198|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128199|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128200|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128201|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128202|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128203|Ccl9|20308|chemokine (C-C motif) ligand 9	AF128204|Ccl9|20308|chemokine (C-C motif) ligand 9	BC139318|Ccl9|20308|chemokine (C-C motif) ligand 9	BC145962|Ccl9|20308|chemokine (C-C motif) ligand 9	U49513|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151131|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155036|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154511|Ccl9|20308|chemokine (C-C motif) ligand 9	AK154657|Ccl9|20308|chemokine (C-C motif) ligand 9	AK155032|Ccl9|20308|chemokine (C-C motif) ligand 9	AK151649|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr7_+_29610281_29610375	2.53707	HNF4A_NR2F1,2.p2	BC087924|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	AF030343|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	BC068112|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	NM_016772|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal	AK088495|Ech1|51798|enoyl coenzyme A hydratase 1, peroxisomal
mm9_v1_chr1_+_174065263_174065366	2.52649	HNF4A_NR2F1,2.p2	AK218140|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr16_+_90738550_90738642	2.52333	HNF4A_NR2F1,2.p2	AK003912|Mrap|77037|melanocortin 2 receptor accessory protein	NM_029844|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chr15_-_89256252_89256259	2.51844	HNF4A_NR2F1,2.p2	BC018270|Cpt1b|12895|carnitine palmitoyltransferase 1b, muscle
mm9_v1_chr5_+_53658344_53658360	2.51827	HNF4A_NR2F1,2.p2	NM_001145433|1810013D10Rik|66278|RIKEN cDNA 1810013D10 gene
mm9_v1_chr11_-_109919796_109919831	2.51697	HNF4A_NR2F1,2.p2	AK148846|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a	BC026496|Abca8a|217258|ATP-binding cassette, sub-family A (ABC1), member 8a
mm9_v1_chr3_-_107499129_107499327	2.51508	HNF4A_NR2F1,2.p2	AB092504|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1	BC018218|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1
mm9_v1_chr6_+_113433507_113433615	2.51108	HNF4A_NR2F1,2.p2	BC029065|Creld1|171508|cysteine-rich with EGF-like domains 1	AK155777|Creld1|171508|cysteine-rich with EGF-like domains 1	AB009020|Creld1|171508|cysteine-rich with EGF-like domains 1	BC010804|Creld1|171508|cysteine-rich with EGF-like domains 1	BC023893|Creld1|171508|cysteine-rich with EGF-like domains 1	NM_133930|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr16_+_4684069_4684136	2.50962	HNF4A_NR2F1,2.p2	NM_001135112|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	NM_023646|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK167511|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK031250|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK004910|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	BC027240|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK004575|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	AK007852|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3	BC003920|Dnaja3|83945|DnaJ (Hsp40) homolog, subfamily A, member 3
mm9_v1_chr2_+_154483045_154483087	2.50958	HNF4A_NR2F1,2.p2	BC006905|Chmp4b|75608|chromatin modifying protein 4B
mm9_v1_chr8_-_73905790_73905902	2.50393	HNF4A_NR2F1,2.p2	AK131941|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6	NM_010150|Nr2f6|13864|nuclear receptor subfamily 2, group F, member 6
mm9_v1_chr1_-_24107142_24107222	2.49803	HNF4A_NR2F1,2.p2	AK149303|Fam135a|68187|family with sequence similarity 135, member A	AK165306|Fam135a|68187|family with sequence similarity 135, member A	NM_026604|Fam135a|68187|family with sequence similarity 135, member A
mm9_v1_chr7_-_135073617_135073632	2.4921	HNF4A_NR2F1,2.p2	AF378085|Prss8|76560|protease, serine, 8 (prostasin)	AY335911|Prss8|76560|protease, serine, 8 (prostasin)	NM_133351|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr17_+_26698421_26698560	2.4809	HNF4A_NR2F1,2.p2	BC005516|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	NM_026170|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK173123|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK003239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK088157|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK004629|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK151239|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK084385|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	BC083144|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AB093571|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	CT010230|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr16_+_92301516_92301565	2.4751	HNF4A_NR2F1,2.p2	AK004538|Fam165b|68936|family with sequence similarity 165, member B	NM_138743|Fam165b|68936|family with sequence similarity 165, member B	AY033901|Fam165b|68936|family with sequence similarity 165, member B	BC005668|Fam165b|68936|family with sequence similarity 165, member B
mm9_v1_chr4_+_129138915_129138922	2.47169	HNF4A_NR2F1,2.p2	BC049111|Bsdc1|100383|BSD domain containing 1	NM_133889|Bsdc1|100383|BSD domain containing 1
mm9_v1_chr7_-_108160480_108160487	2.46667	HNF4A_NR2F1,2.p2	L14751|P2ry2|18442|purinergic receptor P2Y, G-protein coupled 2
mm9_v1_chr11_+_117670970_117671053	2.4624	HNF4A_NR2F1,2.p2	NM_009304|Syngr2|20973|synaptogyrin 2	AK150234|Syngr2|20973|synaptogyrin 2	AK170681|Syngr2|20973|synaptogyrin 2	AF151985|Syngr2|20973|synaptogyrin 2	BC004829|Syngr2|20973|synaptogyrin 2	AF364049|Syngr2|20973|synaptogyrin 2	AK157343|Syngr2|20973|synaptogyrin 2	AJ002307|Syngr2|20973|synaptogyrin 2
mm9_v1_chr7_-_138465593_138465805	2.46224	HNF4A_NR2F1,2.p2	BC140992|Cuzd1|16433|CUB and zona pellucida-like domains 1	NM_008411|Cuzd1|16433|CUB and zona pellucida-like domains 1	U69699|Cuzd1|16433|CUB and zona pellucida-like domains 1
mm9_v1_chr19_+_46781921_46781932	2.4508	HNF4A_NR2F1,2.p2	NM_020577|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr2_-_164630371_164630416	2.4492	HNF4A_NR2F1,2.p2	AF441166|Acot8|170789|acyl-CoA thioesterase 8	NM_133240|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr11_-_5815126_5815140	2.4485	HNF4A_NR2F1,2.p2	BC011139|Gck|103988|glucokinase	AK142698|Gck|103988|glucokinase
mm9_v1_chr7_-_134265516_134265584	2.44736	HNF4A_NR2F1,2.p2	BC011191|Qprt|67375|quinolinate phosphoribosyltransferase	NM_133686|Qprt|67375|quinolinate phosphoribosyltransferase	AK010602|Qprt|67375|quinolinate phosphoribosyltransferase	AK019119|Qprt|67375|quinolinate phosphoribosyltransferase
mm9_v1_chr10_+_127896244_127896376	2.44063	HNF4A_NR2F1,2.p2	NM_001114096|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_001114097|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	NM_198160|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC058720|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK089461|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK170530|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	AK146971|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	BC040363|Smarcc2|68094|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm9_v1_chr4_+_128688217_128688363	2.44029	HNF4A_NR2F1,2.p2	
mm9_v1_chr9_-_21602942_21603000	2.43926	HNF4A_NR2F1,2.p2	BC010245|Kank2|235041|KN motif and ankyrin repeat domains 2	AK045492|Kank2|235041|KN motif and ankyrin repeat domains 2	BC006647|Kank2|235041|KN motif and ankyrin repeat domains 2	AK031324|Kank2|235041|KN motif and ankyrin repeat domains 2	AK049288|Kank2|235041|KN motif and ankyrin repeat domains 2	NM_145611|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr19_-_32177613_32177629	2.43342	HNF4A_NR2F1,2.p2	BC137898|Asah2|54447|N-acylsphingosine amidohydrolase 2	BC145016|Asah2|54447|N-acylsphingosine amidohydrolase 2	AB037181|Asah2|54447|N-acylsphingosine amidohydrolase 2	NM_018830|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr19_-_21547072_21547150	2.42893	HNF4A_NR2F1,2.p2	AF174583|Gda|14544|guanine deaminase	AK044078|Gda|14544|guanine deaminase	AK173138|Gda|14544|guanine deaminase	AK041056|Gda|14544|guanine deaminase	AK079459|Gda|14544|guanine deaminase	AK157014|Gda|14544|guanine deaminase	NM_010266|Gda|14544|guanine deaminase
mm9_v1_chr12_+_113052385_113052495	2.42273	HNF4A_NR2F1,2.p2	AK171099|Zfyve21|68520|zinc finger, FYVE domain containing 21	AK139356|Zfyve21|68520|zinc finger, FYVE domain containing 21	BC019521|Zfyve21|68520|zinc finger, FYVE domain containing 21	BC132248|Zfyve21|68520|zinc finger, FYVE domain containing 21	BC132250|Zfyve21|68520|zinc finger, FYVE domain containing 21	NM_026752|Zfyve21|68520|zinc finger, FYVE domain containing 21	AK003661|Zfyve21|68520|zinc finger, FYVE domain containing 21
mm9_v1_chr10_+_77044467_77044539	2.41218	HNF4A_NR2F1,2.p2	BC023961|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK088813|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK035696|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK098093|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK170971|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK167972|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK168164|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	BC032184|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	BC025533|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	NM_145925|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	BC029144|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK151639|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK152366|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK159987|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK170802|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK089887|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK170972|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK171140|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein	AK075773|Pttg1ip|108705|pituitary tumor-transforming 1 interacting protein
mm9_v1_chr7_-_151008681_151008745	2.3995	HNF4A_NR2F1,2.p2	BC038016|Nadsyn1|78914|NAD synthetase 1	BC018248|Nadsyn1|78914|NAD synthetase 1	AK042389|Nadsyn1|78914|NAD synthetase 1	AK041101|Nadsyn1|78914|NAD synthetase 1	AK045774|Nadsyn1|78914|NAD synthetase 1	AK046491|Nadsyn1|78914|NAD synthetase 1	AJ305343|Nadsyn1|78914|NAD synthetase 1	AK020264|Nadsyn1|78914|NAD synthetase 1	NM_030221|Nadsyn1|78914|NAD synthetase 1
mm9_v1_chr2_-_127555628_127555667	2.39589	HNF4A_NR2F1,2.p2	AK078971|Mall|228576|mal, T-cell differentiation protein-like	AK163867|Mall|228576|mal, T-cell differentiation protein-like	NM_145532|Mall|228576|mal, T-cell differentiation protein-like	BC012256|Mall|228576|mal, T-cell differentiation protein-like
mm9_v1_chr18_+_36823713_36823835	2.38599	HNF4A_NR2F1,2.p2	BC061242|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	NM_201256|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	BC111107|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	BC038258|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	AY226182|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3
mm9_v1_chr17_+_43153490_43153503	2.38377	HNF4A_NR2F1,2.p2	AK043823|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21	NM_178589|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21
mm9_v1_chr17_+_32758263_32758278	2.37857	HNF4A_NR2F1,2.p2	AK132492|Gm9705|677156|predicted gene 9705	NM_001100187|Gm9705|677156|predicted gene 9705	BC151030|Gm9705|677156|predicted gene 9705
mm9_v1_chrX_+_160578411_160578593	2.37583	HNF4A_NR2F1,2.p2	AB053181|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AB053182|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	NM_027286|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	BC026801|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	AK141604|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	GQ262785|Ace2|70008|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm9_v1_chrX_+_96331496_96331657	2.37315	HNF4A_NR2F1,2.p2	BC021656|Efnb1|13641|ephrin B1	BC006797|Efnb1|13641|ephrin B1	Z48781|Efnb1|13641|ephrin B1	BC018572|Efnb1|13641|ephrin B1
mm9_v1_chr15_-_10643806_10643852	2.37168	HNF4A_NR2F1,2.p2	AK160119|Rai14|75646|retinoic acid induced 14
mm9_v1_chr1_-_45460310_45460349	2.37073	HNF4A_NR2F1,2.p2	BC043696|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chrX_+_34138197_34138219	2.35239	HNF4A_NR2F1,2.p2	AK162315|Pgrmc1|53328|progesterone receptor membrane component 1	AK169063|Pgrmc1|53328|progesterone receptor membrane component 1	AK153272|Pgrmc1|53328|progesterone receptor membrane component 1	AK159101|Pgrmc1|53328|progesterone receptor membrane component 1	AK166240|Pgrmc1|53328|progesterone receptor membrane component 1	AK167655|Pgrmc1|53328|progesterone receptor membrane component 1	AK168882|Pgrmc1|53328|progesterone receptor membrane component 1	AK168387|Pgrmc1|53328|progesterone receptor membrane component 1	AK159345|Pgrmc1|53328|progesterone receptor membrane component 1	AK159599|Pgrmc1|53328|progesterone receptor membrane component 1	BC006016|Pgrmc1|53328|progesterone receptor membrane component 1	NM_016783|Pgrmc1|53328|progesterone receptor membrane component 1
mm9_v1_chr17_+_44325518_44325614	2.35199	HNF4A_NR2F1,2.p2	NM_172621|Clic5|224796|chloride intracellular channel 5	AK046522|Clic5|224796|chloride intracellular channel 5	BC064037|Clic5|224796|chloride intracellular channel 5	AK017800|Clic5|224796|chloride intracellular channel 5
mm9_v1_chr15_-_78299035_78299081	2.34927	HNF4A_NR2F1,2.p2	BC057674|Tmprss6|71753|transmembrane serine protease 6	AY240929|Tmprss6|71753|transmembrane serine protease 6	BC029645|Tmprss6|71753|transmembrane serine protease 6	NM_027902|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr9_+_123429291_123429490	2.34867	HNF4A_NR2F1,2.p2	AK180316|Limd1|29806|LIM domains containing 1	AK212225|Limd1|29806|LIM domains containing 1	AK215267|Limd1|29806|LIM domains containing 1	AK215631|Limd1|29806|LIM domains containing 1	AK216846|Limd1|29806|LIM domains containing 1	AK220081|Limd1|29806|LIM domains containing 1	AK210611|Limd1|29806|LIM domains containing 1
mm9_v1_chr9_-_44575861_44575929	2.34539	HNF4A_NR2F1,2.p2	BC034754|Arcn1|213827|archain 1	BC083152|Arcn1|213827|archain 1	BC017124|Arcn1|213827|archain 1	AK031385|Arcn1|213827|archain 1	BC033387|Arcn1|213827|archain 1	NM_145985|Arcn1|213827|archain 1	AK154066|Arcn1|213827|archain 1	AK028556|Arcn1|213827|archain 1	AK128973|Arcn1|213827|archain 1	BC023728|Arcn1|213827|archain 1	AK147747|Arcn1|213827|archain 1	AK047995|Arcn1|213827|archain 1
mm9_v1_chr16_-_85901362_85901374	2.33792	HNF4A_NR2F1,2.p2	NM_011782|Adamts5|23794|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm9_v1_chr14_+_119379780_119379927	2.33243	HNF4A_NR2F1,2.p2	
mm9_v1_chr1_+_82335623_82335683	2.32274	HNF4A_NR2F1,2.p2	AK076751|Rhbdd1|76867|rhomboid domain containing 1	NM_001122685|Rhbdd1|76867|rhomboid domain containing 1	AK015167|Rhbdd1|76867|rhomboid domain containing 1
mm9_v1_chr10_+_127774778_127774839	2.31983	HNF4A_NR2F1,2.p2	AK149990|Cs|12974|citrate synthase	AK010298|Cs|12974|citrate synthase
mm9_v1_chr11_+_98902810_98903140	2.31697	HNF4A_NR2F1,2.p2	
mm9_v1_chr3_+_120994646_120994734	2.31211	HNF4A_NR2F1,2.p2	AK011733|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	BC002278|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	NM_024178|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)
mm9_v1_chr15_-_78298904_78298909	2.30447	HNF4A_NR2F1,2.p2	AK004939|Tmprss6|71753|transmembrane serine protease 6
mm9_v1_chr12_-_103056971_103057106	2.29975	HNF4A_NR2F1,2.p2	AK208765|Fbln5|23876|fibulin 5	AK178699|Fbln5|23876|fibulin 5	BC006636|Fbln5|23876|fibulin 5	AK159189|Fbln5|23876|fibulin 5
mm9_v1_chr7_-_135073577_135073594	2.29835	HNF4A_NR2F1,2.p2	AK078696|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr10_+_18564932_18564972	2.29747	HNF4A_NR2F1,2.p2	AK003734|Perp|64058|PERP, TP53 apoptosis effector	AK009190|Perp|64058|PERP, TP53 apoptosis effector	AK009184|Perp|64058|PERP, TP53 apoptosis effector	BC021772|Perp|64058|PERP, TP53 apoptosis effector
mm9_v1_chr9_-_119835967_119836242	2.29566	HNF4A_NR2F1,2.p2	AK198424|Gorasp1|74498|golgi reassembly stacking protein 1	AK209806|Gorasp1|74498|golgi reassembly stacking protein 1	AK213744|Gorasp1|74498|golgi reassembly stacking protein 1	AK204247|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr15_+_76369247_76369393	2.29502	HNF4A_NR2F1,2.p2	AK161447|Gpr172b|52710|G protein-coupled receptor 172B	AK142597|Gpr172b|52710|G protein-coupled receptor 172B	AK080449|Gpr172b|52710|G protein-coupled receptor 172B	BC016264|Gpr172b|52710|G protein-coupled receptor 172B	AK152335|Gpr172b|52710|G protein-coupled receptor 172B	AK029579|Gpr172b|52710|G protein-coupled receptor 172B	NM_029643|Gpr172b|52710|G protein-coupled receptor 172B	AK008081|Gpr172b|52710|G protein-coupled receptor 172B	AK032015|Gpr172b|52710|G protein-coupled receptor 172B
mm9_v1_chr4_+_129138924_129138934	2.2942	HNF4A_NR2F1,2.p2	AK037201|Bsdc1|100383|BSD domain containing 1	AK084857|Bsdc1|100383|BSD domain containing 1	AK144053|Bsdc1|100383|BSD domain containing 1
mm9_v1_chr16_+_48842663_48842722	2.29384	HNF4A_NR2F1,2.p2	AF323082|Retnla|57262|resistin like alpha	NM_020509|Retnla|57262|resistin like alpha	AK007553|Retnla|57262|resistin like alpha	AF316397|Retnla|57262|resistin like alpha
mm9_v1_chr12_-_103057112_103057240	2.29076	HNF4A_NR2F1,2.p2	AK165018|Fbln5|23876|fibulin 5	AK085170|Fbln5|23876|fibulin 5	AK084895|Fbln5|23876|fibulin 5
mm9_v1_chr15_+_81702875_81703029	2.28247	HNF4A_NR2F1,2.p2	NM_080633|Aco2|11429|aconitase 2, mitochondrial	AK143917|Aco2|11429|aconitase 2, mitochondrial	AK145511|Aco2|11429|aconitase 2, mitochondrial	AK150027|Aco2|11429|aconitase 2, mitochondrial	AK150954|Aco2|11429|aconitase 2, mitochondrial	AK165411|Aco2|11429|aconitase 2, mitochondrial	BC094462|Aco2|11429|aconitase 2, mitochondrial	AK029122|LOC100504340|100504340|hypothetical protein LOC100504340
mm9_v1_chr11_+_77614798_77614851	2.27709	HNF4A_NR2F1,2.p2	AK171342|Myo18a|360013|myosin XVIIIA	AK137574|Myo18a|360013|myosin XVIIIA	AK147584|Myo18a|360013|myosin XVIIIA
mm9_v1_chr2_+_154482753_154482916	2.2685	HNF4A_NR2F1,2.p2	NM_029362|Chmp4b|75608|chromatin modifying protein 4B	BC011429|Chmp4b|75608|chromatin modifying protein 4B	AK008205|Chmp4b|75608|chromatin modifying protein 4B	AK156473|Chmp4b|75608|chromatin modifying protein 4B	AK159193|Chmp4b|75608|chromatin modifying protein 4B	BC059279|Chmp4b|75608|chromatin modifying protein 4B
mm9_v1_chr11_-_119971500_119971623	2.2598	HNF4A_NR2F1,2.p2	AK195379|Slc38a10|72055|solute carrier family 38, member 10	AK176940|Slc38a10|72055|solute carrier family 38, member 10	AK182790|Slc38a10|72055|solute carrier family 38, member 10	BC055017|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr18_-_10706693_10706710	2.25876	HNF4A_NR2F1,2.p2	AF429302|Abhd3|106861|abhydrolase domain containing 3	BC026770|Abhd3|106861|abhydrolase domain containing 3	NM_134130|Abhd3|106861|abhydrolase domain containing 3	AK134676|Abhd3|106861|abhydrolase domain containing 3	AK144238|Abhd3|106861|abhydrolase domain containing 3
mm9_v1_chr16_-_45654180_45654230	2.25676	HNF4A_NR2F1,2.p2	AK078878|BC016579|212998|cDNA sequence, BC016579	BC016579|BC016579|212998|cDNA sequence, BC016579	NM_145389|BC016579|212998|cDNA sequence, BC016579
mm9_v1_chr16_-_85056592_85056771	2.25598	HNF4A_NR2F1,2.p2	M24397|App|11820|amyloid beta (A4) precursor protein	AK161854|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr7_+_133903186_133903314	2.24662	HNF4A_NR2F1,2.p2	S58470|Mapk3|26417|mitogen-activated protein kinase 3	BC013754|Mapk3|26417|mitogen-activated protein kinase 3
mm9_v1_chr15_+_7079540_7079643	2.24509	HNF4A_NR2F1,2.p2	AK155524|Lifr|16880|leukemia inhibitory factor receptor	AK145864|Lifr|16880|leukemia inhibitory factor receptor	NM_001113386|Lifr|16880|leukemia inhibitory factor receptor
mm9_v1_chr17_-_12888210_12888210	2.24429	HNF4A_NR2F1,2.p2	AK053045|Igf2r|16004|insulin-like growth factor 2 receptor
mm9_v1_chr9_-_86465373_86465470	2.24311	HNF4A_NR2F1,2.p2	BC138700|Pgm3|109785|phosphoglucomutase 3	AK051706|Pgm3|109785|phosphoglucomutase 3	AK032776|Pgm3|109785|phosphoglucomutase 3	AK049337|Pgm3|109785|phosphoglucomutase 3	AK169141|Pgm3|109785|phosphoglucomutase 3	AK169082|Pgm3|109785|phosphoglucomutase 3	AK169787|Pgm3|109785|phosphoglucomutase 3	AK165513|Pgm3|109785|phosphoglucomutase 3	AK013402|Pgm3|109785|phosphoglucomutase 3	AK036561|Pgm3|109785|phosphoglucomutase 3	AK049758|Pgm3|109785|phosphoglucomutase 3	AK028066|Pgm3|109785|phosphoglucomutase 3	AK160913|Pgm3|109785|phosphoglucomutase 3	AK043547|Pgm3|109785|phosphoglucomutase 3	NM_001163746|Pgm3|109785|phosphoglucomutase 3	NM_028352|Pgm3|109785|phosphoglucomutase 3
mm9_v1_chr8_+_131238027_131238047	2.24079	HNF4A_NR2F1,2.p2	AK141253|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr11_-_72990492_72990557	2.24003	HNF4A_NR2F1,2.p2	NM_001168470|Tmem93|66048|transmembrane protein 93	BC022104|Tmem93|66048|transmembrane protein 93	AK002385|Tmem93|66048|transmembrane protein 93	AK012769|Tmem93|66048|transmembrane protein 93	AK003198|Tmem93|66048|transmembrane protein 93	AK004149|Tmem93|66048|transmembrane protein 93	NM_025318|Tmem93|66048|transmembrane protein 93
mm9_v1_chr18_-_84819337_84819486	2.23631	HNF4A_NR2F1,2.p2	AK165500|Cndp1|338403|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC043305|Cndp1|338403|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK165706|Cndp1|338403|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK085308|Cndp1|338403|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_177450|Cndp1|338403|carnosine dipeptidase 1 (metallopeptidase M20 family)
mm9_v1_chr14_-_35401845_35401867	2.23476	HNF4A_NR2F1,2.p2	AK084461|Ldb3|24131|LIM domain binding 3	AK137181|Ldb3|24131|LIM domain binding 3	AJ005621|Ldb3|24131|LIM domain binding 3	NM_001039071|Ldb3|24131|LIM domain binding 3	NM_001039072|Ldb3|24131|LIM domain binding 3	NM_001039073|Ldb3|24131|LIM domain binding 3	NM_001039075|Ldb3|24131|LIM domain binding 3	NM_001039076|Ldb3|24131|LIM domain binding 3	NM_011918|Ldb3|24131|LIM domain binding 3	AK004020|Ldb3|24131|LIM domain binding 3
mm9_v1_chr17_-_87665211_87665225	2.23462	HNF4A_NR2F1,2.p2	AK187823|Mcfd2|193813|multiple coagulation factor deficiency 2	AK075781|Mcfd2|193813|multiple coagulation factor deficiency 2	AK033139|Mcfd2|193813|multiple coagulation factor deficiency 2	AK077631|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr11_-_11832366_11832461	2.2303	HNF4A_NR2F1,2.p2	BC033917|Grb10|14783|growth factor receptor bound protein 10	BC036389|Grb10|14783|growth factor receptor bound protein 10
mm9_v1_chr10_-_128356215_128356352	2.22965	HNF4A_NR2F1,2.p2	AF013288|Rdh5|19682|retinol dehydrogenase 5	BC021372|Rdh5|19682|retinol dehydrogenase 5	AF033196|Rdh5|19682|retinol dehydrogenase 5	AK033063|Rdh5|19682|retinol dehydrogenase 5	AK135139|Rdh5|19682|retinol dehydrogenase 5	NM_134006|Rdh5|19682|retinol dehydrogenase 5
mm9_v1_chr9_+_56785271_56785306	2.22808	HNF4A_NR2F1,2.p2	AK004456|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC009145|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)	NM_133976|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr10_-_79209301_79209350	2.21639	HNF4A_NR2F1,2.p2	BC110697|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK154729|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK053356|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK154181|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK047545|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK085666|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK128956|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	BC117939|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	BC117940|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK030039|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	NM_172551|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)
mm9_v1_chr16_+_44173356_44173509	2.2161	HNF4A_NR2F1,2.p2	NM_001029889|Gm608|207806|predicted gene 608
mm9_v1_chr3_+_121948693_121948990	2.21538	HNF4A_NR2F1,2.p2	U95053|Gclm|14630|glutamate-cysteine ligase, modifier subunit	CT010256|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK176933|Gclm|14630|glutamate-cysteine ligase, modifier subunit	AK184377|Gclm|14630|glutamate-cysteine ligase, modifier subunit
mm9_v1_chr17_+_43153516_43153557	2.21271	HNF4A_NR2F1,2.p2	AK143175|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21	AK033529|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21	AK134704|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21	BC016420|Tnfrsf21|94185|tumor necrosis factor receptor superfamily, member 21
mm9_v1_chr2_+_158328394_158328478	2.21258	HNF4A_NR2F1,2.p2	AK131610|Adig|246747|adipogenin	BC054059|Adig|246747|adipogenin	DQ223719|Adig|246747|adipogenin
mm9_v1_chr12_+_113960424_113960466	2.20602	HNF4A_NR2F1,2.p2	AK147410|AW555464|217882|expressed sequence AW555464
mm9_v1_chr7_+_149684731_149684776	2.20507	HNF4A_NR2F1,2.p2	L49466|Tnnt3|21957|troponin T3, skeletal, fast	L49467|Tnnt3|21957|troponin T3, skeletal, fast	L49468|Tnnt3|21957|troponin T3, skeletal, fast	L49469|Tnnt3|21957|troponin T3, skeletal, fast	L49470|Tnnt3|21957|troponin T3, skeletal, fast	L49471|Tnnt3|21957|troponin T3, skeletal, fast	L49472|Tnnt3|21957|troponin T3, skeletal, fast	NM_001163664|Tnnt3|21957|troponin T3, skeletal, fast	NM_001163665|Tnnt3|21957|troponin T3, skeletal, fast	NM_001163666|Tnnt3|21957|troponin T3, skeletal, fast	NM_001163667|Tnnt3|21957|troponin T3, skeletal, fast	NM_001163668|Tnnt3|21957|troponin T3, skeletal, fast	NM_001163669|Tnnt3|21957|troponin T3, skeletal, fast	NM_001163670|Tnnt3|21957|troponin T3, skeletal, fast	NM_011620|Tnnt3|21957|troponin T3, skeletal, fast	U77779|Tnnt3|21957|troponin T3, skeletal, fast	BC003747|Tnnt3|21957|troponin T3, skeletal, fast	AK003147|Tnnt3|21957|troponin T3, skeletal, fast
mm9_v1_chr8_+_74092759_74092780	2.20468	HNF4A_NR2F1,2.p2	AK040923|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr4_-_40800983_40800984	2.19631	HNF4A_NR2F1,2.p2	D00314|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr7_-_108160498_108160526	2.19238	HNF4A_NR2F1,2.p2	BC006613|P2ry2|18442|purinergic receptor P2Y, G-protein coupled 2	AK005013|P2ry2|18442|purinergic receptor P2Y, G-protein coupled 2	NM_008773|P2ry2|18442|purinergic receptor P2Y, G-protein coupled 2	AK017378|P2ry2|18442|purinergic receptor P2Y, G-protein coupled 2	AK156185|P2ry2|18442|purinergic receptor P2Y, G-protein coupled 2
mm9_v1_chr7_-_52973262_52973371	2.19073	HNF4A_NR2F1,2.p2	AK146414|Sphk2|56632|sphingosine kinase 2	AK151990|Sphk2|56632|sphingosine kinase 2	BC053737|Sphk2|56632|sphingosine kinase 2	AF245448|Sphk2|56632|sphingosine kinase 2	NM_001172561|Sphk2|56632|sphingosine kinase 2	NM_203280|Sphk2|56632|sphingosine kinase 2
mm9_v1_chr10_-_126532862_126532974	2.18634	HNF4A_NR2F1,2.p2	
mm9_v1_chr17_-_34256254_34256283	2.18462	HNF4A_NR2F1,2.p2	AF045462|Brd2|14312|bromodomain containing 2	AK220444|Brd2|14312|bromodomain containing 2	AF318183|Brd2|14312|bromodomain containing 2	AK168423|Brd2|14312|bromodomain containing 2
mm9_v1_chr6_-_30254273_30254567	2.18283	HNF4A_NR2F1,2.p2	U19854|Ube2h|22214|ubiquitin-conjugating enzyme E2H	BC008517|Ube2h|22214|ubiquitin-conjugating enzyme E2H	AK131688|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001170345|Gm2058|100039133|predicted gene 2058	AK161414|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_001169576|Ube2h|22214|ubiquitin-conjugating enzyme E2H	NM_009459|Ube2h|22214|ubiquitin-conjugating enzyme E2H
mm9_v1_chr19_+_60965651_60965651	2.18162	HNF4A_NR2F1,2.p2	AK135076|Grk5|14773|G protein-coupled receptor kinase 5	NM_018869|Grk5|14773|G protein-coupled receptor kinase 5
mm9_v1_chr7_-_148358709_148358768	2.18097	HNF4A_NR2F1,2.p2	AK145173|Rnh1|107702|ribonuclease/angiogenin inhibitor 1	NM_001172100|Rnh1|107702|ribonuclease/angiogenin inhibitor 1
mm9_v1_chr16_+_48872756_48872760	2.18043	HNF4A_NR2F1,2.p2	AJ536019|Retnlg|245195|resistin like gamma	AK158401|Retnlg|245195|resistin like gamma
mm9_v1_chr1_-_166371638_166371729	2.17799	HNF4A_NR2F1,2.p2	AK162938|Atp1b1|11931|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm9_v1_chr14_-_35401654_35401841	2.17385	HNF4A_NR2F1,2.p2	AF228057|Ldb3|24131|LIM domain binding 3	AF228058|Ldb3|24131|LIM domain binding 3	AY206011|Ldb3|24131|LIM domain binding 3	AY206015|Ldb3|24131|LIM domain binding 3	AK172980|Ldb3|24131|LIM domain binding 3	NM_001039074|Ldb3|24131|LIM domain binding 3	BC138793|Ldb3|24131|LIM domain binding 3	BC145420|Ldb3|24131|LIM domain binding 3	AK142292|Ldb3|24131|LIM domain binding 3	AF114378|Ldb3|24131|LIM domain binding 3	AY206012|Ldb3|24131|LIM domain binding 3	AF114379|Ldb3|24131|LIM domain binding 3	AY206013|Ldb3|24131|LIM domain binding 3	BC099596|Ldb3|24131|LIM domain binding 3
mm9_v1_chr7_+_116847191_116847288	2.17239	HNF4A_NR2F1,2.p2	AK163012|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK155010|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK086219|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	AK159903|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene	NM_020616|D930014E17Rik|57373|RIKEN cDNA D930014E17 gene
mm9_v1_chr1_-_55144637_55144685	2.16406	HNF4A_NR2F1,2.p2	X55023|Hspd1|15510|heat shock protein 1 (chaperonin)	BC016400|Hspd1|15510|heat shock protein 1 (chaperonin)	AK143882|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr2_-_174120889_174120936	2.16098	HNF4A_NR2F1,2.p2	AF319945|Nespas|56802|neuroendocrine secretory protein antisense	AK153813|Nespas|56802|neuroendocrine secretory protein antisense
mm9_v1_chr11_+_9018007_9018014	2.15957	HNF4A_NR2F1,2.p2	NM_001159401|Upp1|22271|uridine phosphorylase 1
mm9_v1_chr15_-_82983986_82984219	2.15746	HNF4A_NR2F1,2.p2	AK201219|Cyb5r3|109754|cytochrome b5 reductase 3	AK202020|Cyb5r3|109754|cytochrome b5 reductase 3	AK210504|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr9_-_107996781_107996821	2.15632	HNF4A_NR2F1,2.p2	BC025494|Apeh|235606|acylpeptide hydrolase	BC005716|Apeh|235606|acylpeptide hydrolase	AK041271|Apeh|235606|acylpeptide hydrolase	AK149671|Apeh|235606|acylpeptide hydrolase	AK149713|Apeh|235606|acylpeptide hydrolase	NM_146226|Apeh|235606|acylpeptide hydrolase
mm9_v1_chr19_-_6067723_6067866	2.15302	HNF4A_NR2F1,2.p2	AF480070|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK039028|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK155475|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK014166|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK134512|Tm7sf2|73166|transmembrane 7 superfamily member 2	BC014769|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK037325|Tm7sf2|73166|transmembrane 7 superfamily member 2	NM_028454|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK040016|Tm7sf2|73166|transmembrane 7 superfamily member 2	AK043687|Tm7sf2|73166|transmembrane 7 superfamily member 2
mm9_v1_chr3_+_19869841_19869871	2.14692	HNF4A_NR2F1,2.p2	AK160035|Cp|12870|ceruloplasmin
mm9_v1_chr5_-_33560819_33560886	2.14208	HNF4A_NR2F1,2.p2	BC017616|Spon2|100689|spondin 2, extracellular matrix protein	AK028987|Spon2|100689|spondin 2, extracellular matrix protein	AK042840|Spon2|100689|spondin 2, extracellular matrix protein	NM_133903|Spon2|100689|spondin 2, extracellular matrix protein
mm9_v1_chr2_-_35892046_35892111	2.14027	HNF4A_NR2F1,2.p2	
mm9_v1_chr14_-_56364390_56364415	2.13916	HNF4A_NR2F1,2.p2	AK003958|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1
mm9_v1_chr6_+_124662387_124662454	2.13341	HNF4A_NR2F1,2.p2	AK135729|Phb2|12034|prohibitin 2	AY319418|Phb2|12034|prohibitin 2
mm9_v1_chr4_+_132925622_132925655	2.13285	HNF4A_NR2F1,2.p2	AK154857|Slc9a1|20544|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm9_v1_chr6_+_17231172_17231204	2.13007	HNF4A_NR2F1,2.p2	AK151397|Cav2|12390|caveolin 2
mm9_v1_chr14_-_73785068_73785151	2.12747	HNF4A_NR2F1,2.p2	NM_008410|Itm2b|16432|integral membrane protein 2B	U76253|Itm2b|16432|integral membrane protein 2B	AK077482|Itm2b|16432|integral membrane protein 2B	BC010320|Itm2b|16432|integral membrane protein 2B	AK076139|Itm2b|16432|integral membrane protein 2B	AK152068|Itm2b|16432|integral membrane protein 2B	BC021786|Itm2b|16432|integral membrane protein 2B	AK152983|Itm2b|16432|integral membrane protein 2B	AK159619|Itm2b|16432|integral membrane protein 2B	AB030203|Itm2b|16432|integral membrane protein 2B	AK150378|Itm2b|16432|integral membrane protein 2B	AK150396|Itm2b|16432|integral membrane protein 2B	AK151714|Itm2b|16432|integral membrane protein 2B	AK151889|Itm2b|16432|integral membrane protein 2B	AK152516|Itm2b|16432|integral membrane protein 2B	AK152650|Itm2b|16432|integral membrane protein 2B	AK159378|Itm2b|16432|integral membrane protein 2B	AK160725|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr6_+_113442698_113442948	2.12703	HNF4A_NR2F1,2.p2	
mm9_v1_chr11_-_35793590_35793590	2.12356	HNF4A_NR2F1,2.p2	AB271907|Wwc1|211652|WW, C2 and coiled-coil domain containing 1	DQ256090|Wwc1|211652|WW, C2 and coiled-coil domain containing 1	NM_170779|Wwc1|211652|WW, C2 and coiled-coil domain containing 1
mm9_v1_chr11_+_102007677_102007679	2.11743	HNF4A_NR2F1,2.p2	AK075765|Nags|217214|N-acetylglutamate synthase	NM_178053|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr7_-_133768983_133769012	2.11646	HNF4A_NR2F1,2.p2	AF131196|Nupr1|56312|nuclear protein 1	NM_019738|Nupr1|56312|nuclear protein 1	BC002109|Nupr1|56312|nuclear protein 1	AK009572|Nupr1|56312|nuclear protein 1
mm9_v1_chr16_-_44016471_44016548	2.11535	HNF4A_NR2F1,2.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr11_-_61534300_61534300	2.10988	HNF4A_NR2F1,2.p2	AK144033|Slc5a10|109342|solute carrier family 5 (sodium/glucose cotransporter), member 10	NM_001033227|Slc5a10|109342|solute carrier family 5 (sodium/glucose cotransporter), member 10
mm9_v1_chr16_-_38294877_38294920	2.10975	HNF4A_NR2F1,2.p2	AK011108|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2	AK018630|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2	NM_001098404|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2	NM_010936|Nr1i2|18171|nuclear receptor subfamily 1, group I, member 2
mm9_v1_chr1_-_31006599_31006606	2.10806	HNF4A_NR2F1,2.p2	AK148288|Ptp4a1|19243|protein tyrosine phosphatase 4a1	NM_011200|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr5_+_7960430_7960493	2.09792	HNF4A_NR2F1,2.p2	AK040760|Steap4|117167|STEAP family member 4	AJ319746|Steap4|117167|STEAP family member 4	BC006651|Steap4|117167|STEAP family member 4	NM_054098|Steap4|117167|STEAP family member 4	AY029778|Steap4|117167|STEAP family member 4
mm9_v1_chr1_-_193220140_193220197	2.09669	HNF4A_NR2F1,2.p2	
mm9_v1_chr1_-_186635140_186635191	2.09268	HNF4A_NR2F1,2.p2	NM_001081361|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr19_+_46781939_46782006	2.08917	HNF4A_NR2F1,2.p2	AK006571|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AF166383|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AK011320|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	BC145663|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	AK002801|As3mt|57344|arsenic (+3 oxidation state) methyltransferase	BC013468|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr2_+_76244603_76244617	2.08719	HNF4A_NR2F1,2.p2	AK037703|Osbpl6|99031|oxysterol binding protein-like 6	AK157944|Osbpl6|99031|oxysterol binding protein-like 6	AK220498|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr3_+_137004089_137004128	2.0855	HNF4A_NR2F1,2.p2	AB034693|Emcn|59308|endomucin	AF060883|Emcn|59308|endomucin	AK164422|Emcn|59308|endomucin
mm9_v1_chr10_+_127759711_127759783	2.08266	HNF4A_NR2F1,2.p2	AK213625|Cnpy2|56530|canopy 2 homolog (zebrafish)	BC008261|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK007914|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK013568|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK180663|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr9_-_44076207_44076269	2.07468	HNF4A_NR2F1,2.p2	AK170088|Nlrx1|270151|NLR family member X1	AK089260|Nlrx1|270151|NLR family member X1	AK145780|Nlrx1|270151|NLR family member X1	NM_001163743|Nlrx1|270151|NLR family member X1
mm9_v1_chr10_-_79723633_79723732	2.07366	HNF4A_NR2F1,2.p2	AF015887|Gamt|14431|guanidinoacetate methyltransferase	AK158087|Gamt|14431|guanidinoacetate methyltransferase	BC049233|Gamt|14431|guanidinoacetate methyltransferase	AK140688|Gamt|14431|guanidinoacetate methyltransferase	NM_010255|Gamt|14431|guanidinoacetate methyltransferase
mm9_v1_chr9_+_108564418_108564538	2.07256	HNF4A_NR2F1,2.p2	AK161086|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	AK075624|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	NM_020520|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	BC029733|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	AK152436|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	BC052871|Slc25a20|57279|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm9_v1_chr7_+_3568955_3568990	2.06737	HNF4A_NR2F1,2.p2	AK019099|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	NM_025348|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120712|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC120714|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK006243|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	BC061002|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3	AK003133|Ndufa3|66091|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
mm9_v1_chr14_-_37781943_37781973	2.06634	HNF4A_NR2F1,2.p2	AK147383|Gcap14|72972|granule cell antiserum positive 14	NM_027045|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr2_-_147871630_147871640	2.05408	HNF4A_NR2F1,2.p2	AB231453|Foxa2|15376|forkhead box A2	L10409|Foxa2|15376|forkhead box A2
mm9_v1_chr9_+_107436357_107436419	2.05164	HNF4A_NR2F1,2.p2	AK170824|Tmem115|56395|transmembrane protein 115	AK170756|Tmem115|56395|transmembrane protein 115	BC019473|Tmem115|56395|transmembrane protein 115
mm9_v1_chr4_-_115690068_115690125	2.04849	HNF4A_NR2F1,2.p2	AK138481|Faah|14073|fatty acid amide hydrolase
mm9_v1_chr17_-_87665173_87665209	2.04643	HNF4A_NR2F1,2.p2	BC003996|Mcfd2|193813|multiple coagulation factor deficiency 2
mm9_v1_chr11_+_102977638_102977680	2.0423	HNF4A_NR2F1,2.p2	AK134535|Hexim1|192231|hexamethylene bis-acetamide inducible 1	AY090614|Hexim1|192231|hexamethylene bis-acetamide inducible 1	NM_138753|Hexim1|192231|hexamethylene bis-acetamide inducible 1
mm9_v1_chr10_-_74979949_74979990	2.04027	HNF4A_NR2F1,2.p2	AK034509|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene
mm9_v1_chr3_+_52845429_52845504	2.03409	HNF4A_NR2F1,2.p2	BC052079|Lhfp|108927|lipoma HMGIC fusion partner	NM_175386|Lhfp|108927|lipoma HMGIC fusion partner	AK159549|Lhfp|108927|lipoma HMGIC fusion partner	AK159126|Lhfp|108927|lipoma HMGIC fusion partner	AK171791|Lhfp|108927|lipoma HMGIC fusion partner	AK172390|Lhfp|108927|lipoma HMGIC fusion partner	AK172532|Lhfp|108927|lipoma HMGIC fusion partner	BC095934|Lhfp|108927|lipoma HMGIC fusion partner
mm9_v1_chr17_+_56857171_56857246	2.02684	HNF4A_NR2F1,2.p2	NM_027244|Ndufa11|69875|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11	AK008201|Ndufa11|69875|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11	BC053075|Ndufa11|69875|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11	BC059729|Ndufa11|69875|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11	BC027690|Ndufa11|69875|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm9_v1_chr6_-_33010151_33010266	2.02146	HNF4A_NR2F1,2.p2	AK003519|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	NM_025336|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC032987|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK145337|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK006643|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC021941|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK050063|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002263|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002889|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3
mm9_v1_chr14_-_56364421_56364522	2.02105	HNF4A_NR2F1,2.p2	BC003930|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	BC023825|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK159964|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK146317|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168147|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	AK168115|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1	NM_026819|Dhrs1|52585|dehydrogenase/reductase (SDR family) member 1
mm9_v1_chr9_+_20807180_20807224	2.01724	HNF4A_NR2F1,2.p2	NM_023167|Mrpl4|66163|mitochondrial ribosomal protein L4	AB049634|Mrpl4|66163|mitochondrial ribosomal protein L4	AK003746|Mrpl4|66163|mitochondrial ribosomal protein L4	BC039983|Mrpl4|66163|mitochondrial ribosomal protein L4
mm9_v1_chr7_+_72838302_72838367	2.0127	HNF4A_NR2F1,2.p2	NM_026795|Tm2d3|68634|TM2 domain containing 3	NM_178056|Tm2d3|68634|TM2 domain containing 3	AK003917|Tm2d3|68634|TM2 domain containing 3	BC024620|Tm2d3|68634|TM2 domain containing 3
mm9_v1_chr4_+_19502296_19502357	2.00529	HNF4A_NR2F1,2.p2	AK002442|Fam82b|66302|family with sequence similarity 82, member B	AK010421|Fam82b|66302|family with sequence similarity 82, member B	AK160266|Fam82b|66302|family with sequence similarity 82, member B	AK019968|Fam82b|66302|family with sequence similarity 82, member B	BC025158|Fam82b|66302|family with sequence similarity 82, member B	AK029446|Fam82b|66302|family with sequence similarity 82, member B	AK009059|Fam82b|66302|family with sequence similarity 82, member B
mm9_v1_chr12_+_113960379_113960418	2.00479	HNF4A_NR2F1,2.p2	NM_001024602|AW555464|217882|expressed sequence AW555464	AK122236|AW555464|217882|expressed sequence AW555464
mm9_v1_chr10_+_127759794_127759814	2.00338	HNF4A_NR2F1,2.p2	AK179967|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr9_+_20807312_20807429	1.9975	HNF4A_NR2F1,2.p2	AK002464|Mrpl4|66163|mitochondrial ribosomal protein L4	BC037064|Mrpl4|66163|mitochondrial ribosomal protein L4	BC061095|Mrpl4|66163|mitochondrial ribosomal protein L4	BC051685|Mrpl4|66163|mitochondrial ribosomal protein L4	BC023078|Mrpl4|66163|mitochondrial ribosomal protein L4	AB041599|Mrpl4|66163|mitochondrial ribosomal protein L4
mm9_v1_chr17_-_26227018_26227038	1.99644	HNF4A_NR2F1,2.p2	AK137212|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
mm9_v1_chr11_-_77978936_77979062	1.99618	HNF4A_NR2F1,2.p2	AK178796|Traf4|22032|TNF receptor associated factor 4	AF233449|Traf4|22032|TNF receptor associated factor 4	AK035056|Traf4|22032|TNF receptor associated factor 4	AK040877|Traf4|22032|TNF receptor associated factor 4	BC020455|Traf4|22032|TNF receptor associated factor 4	AK053900|Traf4|22032|TNF receptor associated factor 4	NM_009423|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chrX_+_34138224_34138276	1.99617	HNF4A_NR2F1,2.p2	AF042491|Pgrmc1|53328|progesterone receptor membrane component 1
mm9_v1_chr3_-_88307198_88307245	1.99231	HNF4A_NR2F1,2.p2	X14170|Lmna|16905|lamin A	AK167858|Lmna|16905|lamin A	AK004619|Lmna|16905|lamin A	AK147150|Lmna|16905|lamin A	AK149998|Lmna|16905|lamin A	AK150391|Lmna|16905|lamin A	AK150501|Lmna|16905|lamin A	AK150624|Lmna|16905|lamin A	AK152539|Lmna|16905|lamin A	AK152646|Lmna|16905|lamin A	AK152846|Lmna|16905|lamin A
mm9_v1_chr9_+_21807437_21807509	1.98664	HNF4A_NR2F1,2.p2	AK153931|Prkcsh|19089|protein kinase C substrate 80K-H	AK159705|Prkcsh|19089|protein kinase C substrate 80K-H	AK137661|Prkcsh|19089|protein kinase C substrate 80K-H	NM_008925|Prkcsh|19089|protein kinase C substrate 80K-H	U92794|Prkcsh|19089|protein kinase C substrate 80K-H	BC009816|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chr2_-_28771940_28771959	1.98362	HNF4A_NR2F1,2.p2	NM_019446|Barhl1|54422|BarH-like 1 (Drosophila)	AB043980|Barhl1|54422|BarH-like 1 (Drosophila)	BC055731|Barhl1|54422|BarH-like 1 (Drosophila)	NM_001164186|Barhl1|54422|BarH-like 1 (Drosophila)
mm9_v1_chr7_+_134615022_134615162	1.98293	HNF4A_NR2F1,2.p2	BC055033|Prr14|233895|proline rich 14	NM_145589|Prr14|233895|proline rich 14	AK133884|Prr14|233895|proline rich 14
mm9_v1_chr4_-_154273134_154273221	1.97956	HNF4A_NR2F1,2.p2	BC030453|2810405K02Rik|66469|RIKEN cDNA 2810405K02 gene	AK005188|2810405K02Rik|66469|RIKEN cDNA 2810405K02 gene	AK012999|2810405K02Rik|66469|RIKEN cDNA 2810405K02 gene	NM_025582|2810405K02Rik|66469|RIKEN cDNA 2810405K02 gene
mm9_v1_chr1_+_42753970_42753990	1.97771	HNF4A_NR2F1,2.p2	NM_008900|Pou3f3|18993|POU domain, class 3, transcription factor 3
mm9_v1_chr11_-_69828831_69828933	1.97627	HNF4A_NR2F1,2.p2	Z71189|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	AK076037|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	BC026559|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain	NM_017366|Acadvl|11370|acyl-Coenzyme A dehydrogenase, very long chain
mm9_v1_chr5_+_115916274_115916295	1.9727	HNF4A_NR2F1,2.p2	AF162712|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145546|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145908|Pla2g1b|18778|phospholipase A2, group IB, pancreas	BC145910|Pla2g1b|18778|phospholipase A2, group IB, pancreas	NM_011107|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008934|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK028134|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008331|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK028104|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK007797|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008664|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008668|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK007730|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK019009|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF094610|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008841|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK008936|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AK009314|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF097637|Pla2g1b|18778|phospholipase A2, group IB, pancreas	AF187852|Pla2g1b|18778|phospholipase A2, group IB, pancreas
mm9_v1_chr3_-_104621135_104621250	1.97213	HNF4A_NR2F1,2.p2	AK173224|Mov10|17454|Moloney leukemia virus 10	BC053743|Mov10|17454|Moloney leukemia virus 10	X52574|Mov10|17454|Moloney leukemia virus 10	AK004542|Mov10|17454|Moloney leukemia virus 10	AK150204|Mov10|17454|Moloney leukemia virus 10	NM_001163441|Mov10|17454|Moloney leukemia virus 10	NM_008619|Mov10|17454|Moloney leukemia virus 10
mm9_v1_chr6_+_113433656_113433876	1.96517	HNF4A_NR2F1,2.p2	BC025932|Creld1|171508|cysteine-rich with EGF-like domains 1	AK186017|Creld1|171508|cysteine-rich with EGF-like domains 1	AK195695|Creld1|171508|cysteine-rich with EGF-like domains 1	AK208544|Creld1|171508|cysteine-rich with EGF-like domains 1
mm9_v1_chr11_-_101286641_101286646	1.963	HNF4A_NR2F1,2.p2	AK007198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	NM_026865|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr19_-_60950373_60950471	1.95588	HNF4A_NR2F1,2.p2	AK002448|Prdx3|11757|peroxiredoxin 3	BC005626|Prdx3|11757|peroxiredoxin 3	M28723|Prdx3|11757|peroxiredoxin 3	NM_007452|Prdx3|11757|peroxiredoxin 3
mm9_v1_chr7_+_109386818_109386954	1.95466	HNF4A_NR2F1,2.p2	AK019004|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr11_+_75323552_75323644	1.95448	HNF4A_NR2F1,2.p2	NM_001029938|Rilp|280408|Rab interacting lysosomal protein	AK139016|Rilp|280408|Rab interacting lysosomal protein	BC116750|Rilp|280408|Rab interacting lysosomal protein	BC119166|Rilp|280408|Rab interacting lysosomal protein
mm9_v1_chr9_+_54547344_54547366	1.94846	HNF4A_NR2F1,2.p2	AK046476|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4	AK076175|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4	AK141909|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4	NM_021422|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4
mm9_v1_chr5_-_130500116_130500235	1.94332	HNF4A_NR2F1,2.p2	AK148764|Asl|109900|argininosuccinate lyase	AK168739|Asl|109900|argininosuccinate lyase	AK138423|Asl|109900|argininosuccinate lyase	BC016670|Asl|109900|argininosuccinate lyase	NM_133768|Asl|109900|argininosuccinate lyase	AK010922|Asl|109900|argininosuccinate lyase	AK076453|Asl|109900|argininosuccinate lyase	AK140160|Asl|109900|argininosuccinate lyase
mm9_v1_chr4_-_141094387_141094511	1.94001	HNF4A_NR2F1,2.p2	AK137647|Spen|56381|SPEN homolog, transcriptional regulator (Drosophila)	NM_019763|Spen|56381|SPEN homolog, transcriptional regulator (Drosophila)
mm9_v1_chr15_-_82451336_82451336	1.93899	HNF4A_NR2F1,2.p2	BC018285|Cyp2d34|223706|cytochrome P450, family 2, subfamily d, polypeptide 34	NM_145474|Cyp2d34|223706|cytochrome P450, family 2, subfamily d, polypeptide 34
mm9_v1_chr8_+_77397072_77397072	1.92963	HNF4A_NR2F1,2.p2	AK018615|Isx|71597|intestine specific homeobox	NM_027837|Isx|71597|intestine specific homeobox
mm9_v1_chrX_-_156576261_156576298	1.91373	HNF4A_NR2F1,2.p2	BC007142|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	NM_008810|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK148459|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK167987|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1
mm9_v1_chr11_-_83392109_83392117	1.91265	HNF4A_NR2F1,2.p2	U15209|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr11_+_77992183_77992219	1.91238	HNF4A_NR2F1,2.p2	BC039182|Tlcd1|68385|TLC domain containing 1	AK165432|Tlcd1|68385|TLC domain containing 1
mm9_v1_chr17_-_27865833_27865918	1.90971	HNF4A_NR2F1,2.p2	AB019436|Spdef|30051|SAM pointed domain containing ets transcription factor	AK078863|Spdef|30051|SAM pointed domain containing ets transcription factor	NM_013891|Spdef|30051|SAM pointed domain containing ets transcription factor
mm9_v1_chr6_+_17231334_17231388	1.90634	HNF4A_NR2F1,2.p2	BC023095|Cav2|12390|caveolin 2	NM_016900|Cav2|12390|caveolin 2	AK009913|Cav2|12390|caveolin 2
mm9_v1_chr5_+_65194749_65194773	1.90039	HNF4A_NR2F1,2.p2	AK143838|Klf3|16599|Kruppel-like factor 3 (basic)	AK007959|Klf3|16599|Kruppel-like factor 3 (basic)	NM_008453|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr10_-_80363606_80363713	1.89685	HNF4A_NR2F1,2.p2	AF144702|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)	NM_013895|Timm13|30055|translocase of inner mitochondrial membrane 13 homolog (yeast)
mm9_v1_chr8_+_73242422_73242441	1.89084	HNF4A_NR2F1,2.p2	NM_001195253|Gm3336|100041434|predicted gene 3336
mm9_v1_chr1_-_95532242_95532249	1.89052	HNF4A_NR2F1,2.p2	AK152917|Stk25|59041|serine/threonine kinase 25 (yeast)
mm9_v1_chr11_+_120353150_120353163	1.89048	HNF4A_NR2F1,2.p2	AK151645|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	NM_013770|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10
mm9_v1_chr13_-_24026024_24026024	1.88571	HNF4A_NR2F1,2.p2	BC126923|Hist1h2ba|319177|histone cluster 1, H2ba	NM_175663|Hist1h2ba|319177|histone cluster 1, H2ba
mm9_v1_chr4_-_133810011_133810020	1.88549	HNF4A_NR2F1,2.p2	AK012898|Grrp1|72690|glycine/arginine rich protein 1	BC048704|Grrp1|72690|glycine/arginine rich protein 1	NM_001099296|Grrp1|72690|glycine/arginine rich protein 1
mm9_v1_chr19_-_43986881_43986881	1.8846	HNF4A_NR2F1,2.p2	AY383729|Dnmbp|71972|dynamin binding protein	NM_028029|Dnmbp|71972|dynamin binding protein
mm9_v1_chr9_+_89949104_89949104	1.88266	HNF4A_NR2F1,2.p2	NM_007801|Ctsh|13036|cathepsin H
mm9_v1_chr6_+_83692983_83693062	1.87477	HNF4A_NR2F1,2.p2	AK078810|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK168980|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AF435091|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085549|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	NM_134157|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC017127|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC080796|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052604|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC062202|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK052707|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	AK085469|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC058584|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1	BC013168|Atp6v1b1|110935|ATPase, H+ transporting, lysosomal V1 subunit B1
mm9_v1_chr10_-_53638995_53639134	1.87268	HNF4A_NR2F1,2.p2	AK204950|Man1a|17155|mannosidase 1, alpha	AK192972|Man1a|17155|mannosidase 1, alpha	AK191835|Man1a|17155|mannosidase 1, alpha	AK196316|Man1a|17155|mannosidase 1, alpha	AK196883|Man1a|17155|mannosidase 1, alpha	AK201818|Man1a|17155|mannosidase 1, alpha	AK211829|Man1a|17155|mannosidase 1, alpha
mm9_v1_chr13_-_35085948_35086012	1.86736	HNF4A_NR2F1,2.p2	AF153613|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK170778|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK009478|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_011868|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_001110331|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	NM_001110332|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
mm9_v1_chr2_+_110437454_110437527	1.86604	HNF4A_NR2F1,2.p2	AF529222|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	NM_001003915|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	NM_001177624|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK085356|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK128951|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK143967|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK165419|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK085335|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	AK144004|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12	BC141255|Slc5a12|241612|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm9_v1_chr9_-_26613989_26614018	1.86598	HNF4A_NR2F1,2.p2	AK143057|Glb1l2|244757|galactosidase, beta 1-like 2	BC038479|Glb1l2|244757|galactosidase, beta 1-like 2	NM_153803|Glb1l2|244757|galactosidase, beta 1-like 2	AK033400|Glb1l2|244757|galactosidase, beta 1-like 2
mm9_v1_chr2_+_74560034_74560034	1.86581	HNF4A_NR2F1,2.p2	NM_010469|Hoxd4|15436|homeobox D4
mm9_v1_chr19_+_45092581_45092707	1.86174	HNF4A_NR2F1,2.p2	NM_001130526|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK081367|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK129446|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr7_-_7252221_7252267	1.85973	HNF4A_NR2F1,2.p2	BC110668|Clcn4-2|12727|chloride channel 4-2	NM_011334|Clcn4-2|12727|chloride channel 4-2	BC089497|Clcn4-2|12727|chloride channel 4-2
mm9_v1_chr6_-_42323208_42323279	1.85801	HNF4A_NR2F1,2.p2	AF131197|Epha1|13835|Eph receptor A1	BC071215|Epha1|13835|Eph receptor A1	AK017662|Epha1|13835|Eph receptor A1	AK028478|Epha1|13835|Eph receptor A1	NM_023580|Epha1|13835|Eph receptor A1
mm9_v1_chr10_-_127930880_127930955	1.84475	HNF4A_NR2F1,2.p2	BC026760|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	NM_010860|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	BC092214|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	BC081470|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	BC089485|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK143885|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK167106|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK167859|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK168869|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK167191|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	AK168450|Myl6|17904|myosin, light polypeptide 6, alkali, smooth muscle and non-muscle
mm9_v1_chr11_+_69715343_69715451	1.84075	HNF4A_NR2F1,2.p2	NM_001013414|Neurl4|216860|neuralized homolog 4 (Drosophila)	AK157107|Neurl4|216860|neuralized homolog 4 (Drosophila)
mm9_v1_chr2_+_174155506_174155512	1.83302	HNF4A_NR2F1,2.p2	BC034446|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr3_-_107499460_107499466	1.82905	HNF4A_NR2F1,2.p2	NM_145542|Ahcyl1|229709|S-adenosylhomocysteine hydrolase-like 1
mm9_v1_chr10_+_69707847_69707906	1.82684	HNF4A_NR2F1,2.p2	AK004599|Slc16a9|66859|solute carrier family 16 (monocarboxylic acid transporters), member 9
mm9_v1_chr19_-_11893892_11893892	1.82664	HNF4A_NR2F1,2.p2	BC056949|Stx3|20908|syntaxin 3	NM_001025307|Stx3|20908|syntaxin 3	NM_152220|Stx3|20908|syntaxin 3
mm9_v1_chr4_+_147976641_147976774	1.82432	HNF4A_NR2F1,2.p2	NM_001003893|Masp2|17175|mannan-binding lectin serine peptidase 2	NM_010767|Masp2|17175|mannan-binding lectin serine peptidase 2	AJ250369|Masp2|17175|mannan-binding lectin serine peptidase 2	AK050052|Masp2|17175|mannan-binding lectin serine peptidase 2	AK149421|Masp2|17175|mannan-binding lectin serine peptidase 2	Y19160|Masp2|17175|mannan-binding lectin serine peptidase 2	Y19163|Masp2|17175|mannan-binding lectin serine peptidase 2	BC013893|Masp2|17175|mannan-binding lectin serine peptidase 2
mm9_v1_chr7_+_31017305_31017379	1.82347	HNF4A_NR2F1,2.p2	AK012635|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I	AB221537|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I
mm9_v1_chr19_-_6982516_6982562	1.82252	HNF4A_NR2F1,2.p2	AK209224|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr4_+_133074949_133074970	1.82207	HNF4A_NR2F1,2.p2	BC006890|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene
mm9_v1_chrX_-_35809466_35809639	1.82093	HNF4A_NR2F1,2.p2	BC138718|Lamp2|16784|lysosomal-associated membrane protein 2	BC138723|Lamp2|16784|lysosomal-associated membrane protein 2	J05287|Lamp2|16784|lysosomal-associated membrane protein 2	AK048174|Lamp2|16784|lysosomal-associated membrane protein 2	AK159272|Lamp2|16784|lysosomal-associated membrane protein 2	AK159731|Lamp2|16784|lysosomal-associated membrane protein 2	AK136550|Lamp2|16784|lysosomal-associated membrane protein 2	AK012149|Lamp2|16784|lysosomal-associated membrane protein 2	AK032974|Lamp2|16784|lysosomal-associated membrane protein 2	AK150766|Lamp2|16784|lysosomal-associated membrane protein 2	AK088804|Lamp2|16784|lysosomal-associated membrane protein 2	AK146731|Lamp2|16784|lysosomal-associated membrane protein 2	AK078193|Lamp2|16784|lysosomal-associated membrane protein 2	NM_001017959|Lamp2|16784|lysosomal-associated membrane protein 2	NM_010685|Lamp2|16784|lysosomal-associated membrane protein 2	AK163933|Lamp2|16784|lysosomal-associated membrane protein 2
mm9_v1_chr19_-_10137491_10137508	1.81998	HNF4A_NR2F1,2.p2	
mm9_v1_chr17_-_45797425_45797512	1.8132	HNF4A_NR2F1,2.p2	AK216465|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr13_-_34437042_34437162	1.80206	HNF4A_NR2F1,2.p2	AK147397|Slc22a23|73102|solute carrier family 22, member 23	NM_001033167|Slc22a23|73102|solute carrier family 22, member 23
mm9_v1_chr14_+_122277821_122277919	1.80202	HNF4A_NR2F1,2.p2	NM_026861|Ubac2|68889|ubiquitin associated domain containing 2	BC024467|Ubac2|68889|ubiquitin associated domain containing 2	AK049109|Ubac2|68889|ubiquitin associated domain containing 2	AK158177|Ubac2|68889|ubiquitin associated domain containing 2
mm9_v1_chr11_+_9018105_9018140	1.79855	HNF4A_NR2F1,2.p2	D44464|Upp1|22271|uridine phosphorylase 1	NM_009477|Upp1|22271|uridine phosphorylase 1	BC036559|Upp1|22271|uridine phosphorylase 1
mm9_v1_chr4_+_101092307_101092393	1.79768	HNF4A_NR2F1,2.p2	NM_009647|Ak4|11639|adenylate kinase 4	AK144439|Ak4|11639|adenylate kinase 4	BC086791|Ak4|11639|adenylate kinase 4	D85036|Ak4|11639|adenylate kinase 4	AB020239|Ak4|11639|adenylate kinase 4	BC086663|Ak4|11639|adenylate kinase 4	AK166975|Ak4|11639|adenylate kinase 4
mm9_v1_chr18_-_38157190_38157227	1.79557	HNF4A_NR2F1,2.p2	AK053122|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	BC068145|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	AK220486|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	NM_139206|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
mm9_v1_chr9_-_44076480_44076681	1.79226	HNF4A_NR2F1,2.p2	BC050054|Nlrx1|270151|NLR family member X1	AK141296|Nlrx1|270151|NLR family member X1	AK145988|Nlrx1|270151|NLR family member X1	NM_178420|Nlrx1|270151|NLR family member X1	AK166689|Nlrx1|270151|NLR family member X1	NM_001163742|Nlrx1|270151|NLR family member X1
mm9_v1_chr5_-_135489006_135489022	1.79057	HNF4A_NR2F1,2.p2	AK008014|2010001M06Rik|69812|RIKEN cDNA 2010001M06 gene
mm9_v1_chr4_+_43591798_43591856	1.78883	HNF4A_NR2F1,2.p2	BC086614|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)	AK170117|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)	AK129103|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)	AK089288|Rgp1|242406|RGP1 retrograde golgi transport homolog (S. cerevisiae)
mm9_v1_chr5_-_74023659_74023666	1.78778	HNF4A_NR2F1,2.p2	BC031901|Lrrc66|231296|leucine rich repeat containing 66	NM_153568|Lrrc66|231296|leucine rich repeat containing 66	AK051875|Lrrc66|231296|leucine rich repeat containing 66
mm9_v1_chr11_-_98261774_98261803	1.78549	HNF4A_NR2F1,2.p2	NM_001033537|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr14_-_31756446_31756482	1.78035	HNF4A_NR2F1,2.p2	BC013465|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	X70391|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	BC028814|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	AK149500|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1	NM_008406|Itih1|16424|inter-alpha trypsin inhibitor, heavy chain 1
mm9_v1_chr2_+_118993521_118993566	1.7789	HNF4A_NR2F1,2.p2	AK028116|Gchfr|320415|GTP cyclohydrolase I feedback regulator	AK028122|Gchfr|320415|GTP cyclohydrolase I feedback regulator	NM_177157|Gchfr|320415|GTP cyclohydrolase I feedback regulator	BC132450|Gchfr|320415|GTP cyclohydrolase I feedback regulator	BC132478|Gchfr|320415|GTP cyclohydrolase I feedback regulator	BC096406|Gchfr|320415|GTP cyclohydrolase I feedback regulator
mm9_v1_chr1_+_155747072_155747097	1.77835	HNF4A_NR2F1,2.p2	AK137969|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159106|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK160670|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AY044241|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	NM_008131|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK162685|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK168493|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	BC015086|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	X16314|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr15_-_57309179_57309179	1.77814	HNF4A_NR2F1,2.p2	AK030222|BC026439|210463|cDNA sequence BC026439	NM_172378|BC026439|210463|cDNA sequence BC026439
mm9_v1_chr11_-_50051972_50051973	1.77484	HNF4A_NR2F1,2.p2	BC028760|Ltc4s|17001|leukotriene C4 synthase	NM_008521|Ltc4s|17001|leukotriene C4 synthase	U27195|Ltc4s|17001|leukotriene C4 synthase
mm9_v1_chr10_+_127142225_127142311	1.77056	HNF4A_NR2F1,2.p2	BC147605|Myo1a|432516|myosin IA	BC147612|Myo1a|432516|myosin IA	AF009960|Myo1a|432516|myosin IA	NM_001081219|Myo1a|432516|myosin IA
mm9_v1_chrX_-_71269249_71269268	1.76781	HNF4A_NR2F1,2.p2	BC004778|Irak1|16179|interleukin-1 receptor-associated kinase 1	AF103876|Irak1|16179|interleukin-1 receptor-associated kinase 1	AY184362|Irak1|16179|interleukin-1 receptor-associated kinase 1	AY184363|Irak1|16179|interleukin-1 receptor-associated kinase 1	AY184364|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177975|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177973|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177974|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_001177976|Irak1|16179|interleukin-1 receptor-associated kinase 1	NM_008363|Irak1|16179|interleukin-1 receptor-associated kinase 1
mm9_v1_chr9_-_21793855_21793867	1.76655	HNF4A_NR2F1,2.p2	AF237669|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3	AK004876|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3
mm9_v1_chr1_-_95057446_95057524	1.75826	HNF4A_NR2F1,2.p2	AK009193|2310007B03Rik|71874|RIKEN cDNA 2310007B03 gene	NM_001159940|2310007B03Rik|71874|RIKEN cDNA 2310007B03 gene	BC089525|2310007B03Rik|71874|RIKEN cDNA 2310007B03 gene	NM_172411|2310007B03Rik|71874|RIKEN cDNA 2310007B03 gene
mm9_v1_chr7_+_107520787_107520818	1.75804	HNF4A_NR2F1,2.p2	AK165331|C2cd3|277939|C2 calcium-dependent domain containing 3	AK162155|C2cd3|277939|C2 calcium-dependent domain containing 3
mm9_v1_chr3_+_137004041_137004080	1.75681	HNF4A_NR2F1,2.p2	NM_001163522|Emcn|59308|endomucin	NM_016885|Emcn|59308|endomucin	AK145825|Emcn|59308|endomucin	AK002616|Emcn|59308|endomucin	AK029348|Emcn|59308|endomucin	BC003706|Emcn|59308|endomucin
mm9_v1_chr5_+_31350991_31351042	1.75422	HNF4A_NR2F1,2.p2	NM_027855|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151307|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK151366|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC049637|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AB009018|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK002276|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	AK169267|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene	BC057097|0610007C21Rik|381629|RIKEN cDNA 0610007C21 gene
mm9_v1_chr7_-_29965500_29965550	1.75389	HNF4A_NR2F1,2.p2	BC004075|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159795|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159926|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK166718|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK002921|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK003436|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK153329|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150493|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK051257|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK020132|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr16_+_22918406_22918454	1.75361	HNF4A_NR2F1,2.p2	AK009310|Fetub|59083|fetuin beta	AK009554|Fetub|59083|fetuin beta	AK037043|Fetub|59083|fetuin beta	NM_001083905|Fetub|59083|fetuin beta
mm9_v1_chr7_-_134027930_134028177	1.75282	HNF4A_NR2F1,2.p2	BC077714|Taok2|381921|TAO kinase 2	BC075676|Taok2|381921|TAO kinase 2
mm9_v1_chr3_-_115710131_115710328	1.75151	HNF4A_NR2F1,2.p2	AF529196|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AF233322|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC050193|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	BC017136|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK075802|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	AK010008|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7	NM_023214|Slc30a7|66500|solute carrier family 30 (zinc transporter), member 7
mm9_v1_chr8_+_74092790_74092825	1.74961	HNF4A_NR2F1,2.p2	BC028937|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1	NM_011977|Slc27a1|26457|solute carrier family 27 (fatty acid transporter), member 1
mm9_v1_chr4_+_133074976_133075003	1.74785	HNF4A_NR2F1,2.p2	AK158383|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene
mm9_v1_chr7_+_52590612_52590774	1.74696	HNF4A_NR2F1,2.p2	AK017230|Hrc|15464|histidine rich calcium binding protein	NM_010473|Hrc|15464|histidine rich calcium binding protein	AF132218|Hrc|15464|histidine rich calcium binding protein	AF158597|Hrc|15464|histidine rich calcium binding protein	BC141121|Hrc|15464|histidine rich calcium binding protein
mm9_v1_chr9_+_46076832_46076883	1.74355	HNF4A_NR2F1,2.p2	BC011198|Apoa5|66113|apolipoprotein A-V
mm9_v1_chr7_+_57014881_57014926	1.73037	HNF4A_NR2F1,2.p2	NM_001146052|Htatip2|53415|HIV-1 tat interactive protein 2, homolog (human)	AK008630|Htatip2|53415|HIV-1 tat interactive protein 2, homolog (human)	BC017372|Htatip2|53415|HIV-1 tat interactive protein 2, homolog (human)
mm9_v1_chr7_-_20300595_20300626	1.72592	HNF4A_NR2F1,2.p2	AF043249|Tomm40|53333|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF316403|Tomm40|53333|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF316404|Tomm40|53333|translocase of outer mitochondrial membrane 40 homolog (yeast)
mm9_v1_chr17_-_13153182_13153211	1.72589	HNF4A_NR2F1,2.p2	AK013275|Acat2|110460|acetyl-Coenzyme A acetyltransferase 2
mm9_v1_chr4_-_116380924_116380989	1.72273	HNF4A_NR2F1,2.p2	AK007725|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	AK012761|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	BC054756|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	AK084194|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria	NM_025962|Mmachc|67096|methylmalonic aciduria cblC type, with homocystinuria
mm9_v1_chr14_+_66285263_66285346	1.72183	HNF4A_NR2F1,2.p2	BC016096|Scara5|71145|scavenger receptor class A, member 5 (putative)	AK016912|Scara5|71145|scavenger receptor class A, member 5 (putative)	AK033154|Scara5|71145|scavenger receptor class A, member 5 (putative)	BC032159|Scara5|71145|scavenger receptor class A, member 5 (putative)	BC023907|Scara5|71145|scavenger receptor class A, member 5 (putative)
mm9_v1_chr15_-_82210591_82210704	1.72097	HNF4A_NR2F1,2.p2	BC016256|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	AK086555|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	BC006853|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_001163472|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22	NM_019823|Cyp2d22|56448|cytochrome P450, family 2, subfamily d, polypeptide 22
mm9_v1_chr17_-_26227104_26227112	1.71986	HNF4A_NR2F1,2.p2	AF155575|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal	NM_011933|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
mm9_v1_chr5_-_45841382_45841479	1.71892	HNF4A_NR2F1,2.p2	AK011351|Qdpr|110391|quinoid dihydropteridine reductase	BC002107|Qdpr|110391|quinoid dihydropteridine reductase	AK159107|Qdpr|110391|quinoid dihydropteridine reductase	AK078123|Qdpr|110391|quinoid dihydropteridine reductase	AK166694|Qdpr|110391|quinoid dihydropteridine reductase	NM_024236|Qdpr|110391|quinoid dihydropteridine reductase
mm9_v1_chr6_+_133055256_133055343	1.71501	HNF4A_NR2F1,2.p2	BC053418|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	NM_001163445|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK031684|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK077261|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK076076|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK050460|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK170805|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene	AK005205|2700089E24Rik|381820|RIKEN cDNA 2700089E24 gene
mm9_v1_chr11_+_109405024_109405067	1.70444	HNF4A_NR2F1,2.p2	NM_001166177|Arsg|74008|arylsulfatase G	BC039629|Arsg|74008|arylsulfatase G
mm9_v1_chr14_+_79249036_79249063	1.70261	HNF4A_NR2F1,2.p2	AK033642|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene	AK004956|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene	BC019143|1300010F03Rik|219189|RIKEN cDNA 1300010F03 gene
mm9_v1_chr2_-_91035191_91035217	1.69832	HNF4A_NR2F1,2.p2	AK159250|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3	NM_013839|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3	BC012646|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3	AK143904|Nr1h3|22259|nuclear receptor subfamily 1, group H, member 3
mm9_v1_chr3_-_117571789_117571835	1.69817	HNF4A_NR2F1,2.p2	AK170966|Snx7|76561|sorting nexin 7	AK052487|Snx7|76561|sorting nexin 7	AK011015|Snx7|76561|sorting nexin 7
mm9_v1_chr2_+_25413360_25413471	1.69394	HNF4A_NR2F1,2.p2	AK003557|Edf1|59022|endothelial differentiation-related factor 1	AK002345|Edf1|59022|endothelial differentiation-related factor 1	AK010191|Edf1|59022|endothelial differentiation-related factor 1	AB030185|Edf1|59022|endothelial differentiation-related factor 1	NM_021519|Edf1|59022|endothelial differentiation-related factor 1	BC023472|Edf1|59022|endothelial differentiation-related factor 1	AJ309569|Edf1|59022|endothelial differentiation-related factor 1
mm9_v1_chr19_+_10763393_10763462	1.69209	HNF4A_NR2F1,2.p2	AK030717|Vps37c|107305|vacuolar protein sorting 37C (yeast)
mm9_v1_chr19_+_9092973_9093058	1.68933	HNF4A_NR2F1,2.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr1_-_55144687_55144775	1.67954	HNF4A_NR2F1,2.p2	AK088844|Hspd1|15510|heat shock protein 1 (chaperonin)	AK146831|Hspd1|15510|heat shock protein 1 (chaperonin)	NM_010477|Hspd1|15510|heat shock protein 1 (chaperonin)
mm9_v1_chr10_-_74980017_74980125	1.67896	HNF4A_NR2F1,2.p2	AK040832|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC024851|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC043463|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	NM_175133|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	AK170872|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC118613|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	BC119795|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene	AK157404|1110038D17Rik|68778|RIKEN cDNA 1110038D17 gene
mm9_v1_chr14_-_65059694_65059876	1.67595	HNF4A_NR2F1,2.p2	AK002356|Msra|110265|methionine sulfoxide reductase A	AK009822|Msra|110265|methionine sulfoxide reductase A	AK030278|Msra|110265|methionine sulfoxide reductase A	BC014738|Msra|110265|methionine sulfoxide reductase A	AK049714|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr11_-_5849601_5849601	1.67517	HNF4A_NR2F1,2.p2	L38990|Gck|103988|glucokinase	NM_010292|Gck|103988|glucokinase
mm9_v1_chr7_+_130358326_130358379	1.67497	HNF4A_NR2F1,2.p2	AK008219|Slc5a11|233836|solute carrier family 5 (sodium/glucose cotransporter), member 11	AF518726|Slc5a11|233836|solute carrier family 5 (sodium/glucose cotransporter), member 11	BC031742|Slc5a11|233836|solute carrier family 5 (sodium/glucose cotransporter), member 11	NM_146198|Slc5a11|233836|solute carrier family 5 (sodium/glucose cotransporter), member 11
mm9_v1_chr11_-_50051989_50052021	1.67311	HNF4A_NR2F1,2.p2	BC038518|Ltc4s|17001|leukotriene C4 synthase
mm9_v1_chr7_-_107520411_107520510	1.67035	HNF4A_NR2F1,2.p2	AK146268|Ppme1|72590|protein phosphatase methylesterase 1	AK028261|Ppme1|72590|protein phosphatase methylesterase 1	AK012256|Ppme1|72590|protein phosphatase methylesterase 1	AK154876|Ppme1|72590|protein phosphatase methylesterase 1
mm9_v1_chr14_+_47451832_47451844	1.66992	HNF4A_NR2F1,2.p2	AK154797|Cgrrf1|68755|cell growth regulator with ring finger domain 1
mm9_v1_chr8_+_34763918_34764151	1.66803	HNF4A_NR2F1,2.p2	AK040136|Gsr|14782|glutathione reductase	X76341|Gsr|14782|glutathione reductase	AK159678|Gsr|14782|glutathione reductase	AK019177|Gsr|14782|glutathione reductase	AK159218|Gsr|14782|glutathione reductase	AK151063|Gsr|14782|glutathione reductase	AK151247|Gsr|14782|glutathione reductase	AK152873|Gsr|14782|glutathione reductase	AK084328|Gsr|14782|glutathione reductase	AK167393|Gsr|14782|glutathione reductase	AK151674|Gsr|14782|glutathione reductase
mm9_v1_chr8_-_64069935_64069941	1.66719	HNF4A_NR2F1,2.p2	AK087573|Palld|72333|palladin, cytoskeletal associated protein	AK149663|Palld|72333|palladin, cytoskeletal associated protein
mm9_v1_chr19_+_6276885_6276962	1.66514	HNF4A_NR2F1,2.p2	AK171047|Ehd1|13660|EH-domain containing 1	NM_010119|Ehd1|13660|EH-domain containing 1	AF173156|Ehd1|13660|EH-domain containing 1	AK167721|Ehd1|13660|EH-domain containing 1	AF099186|Ehd1|13660|EH-domain containing 1	AK154651|Ehd1|13660|EH-domain containing 1	AK160535|Ehd1|13660|EH-domain containing 1	AK166701|Ehd1|13660|EH-domain containing 1	AK159943|Ehd1|13660|EH-domain containing 1	AK077536|Ehd1|13660|EH-domain containing 1	AK012896|Ehd1|13660|EH-domain containing 1	AK159191|Ehd1|13660|EH-domain containing 1	AK168610|Ehd1|13660|EH-domain containing 1	AK172539|Ehd1|13660|EH-domain containing 1	BC043332|Ehd1|13660|EH-domain containing 1	BC037094|Ehd1|13660|EH-domain containing 1	BC054828|Ehd1|13660|EH-domain containing 1	AK152821|Ehd1|13660|EH-domain containing 1
mm9_v1_chr3_-_107820705_107820751	1.66354	HNF4A_NR2F1,2.p2	J03952|Gstm1|14862|glutathione S-transferase, mu 1	BC003822|Gstm1|14862|glutathione S-transferase, mu 1	BC091763|Gstm1|14862|glutathione S-transferase, mu 1	BC046758|Gstm1|14862|glutathione S-transferase, mu 1
mm9_v1_chr15_-_89260259_89260372	1.66236	HNF4A_NR2F1,2.p2	BC069925|Chkb|12651|choline kinase beta	AB011000|Chkb|12651|choline kinase beta	AB011001|Chkb|12651|choline kinase beta	AK164379|Chkb|12651|choline kinase beta	AK078101|Chkb|12651|choline kinase beta	NM_007692|Chkb|12651|choline kinase beta
mm9_v1_chr5_-_4104696_4104696	1.66037	HNF4A_NR2F1,2.p2	NM_020010|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr5_+_8893700_8893720	1.66037	HNF4A_NR2F1,2.p2	J03398|Abcb4|18670|ATP-binding cassette, sub-family B (MDR/TAP), member 4	AK144024|Abcb4|18670|ATP-binding cassette, sub-family B (MDR/TAP), member 4	AK165484|Abcb4|18670|ATP-binding cassette, sub-family B (MDR/TAP), member 4	NM_008830|Abcb4|18670|ATP-binding cassette, sub-family B (MDR/TAP), member 4
mm9_v1_chr5_-_137463661_137463751	1.65802	HNF4A_NR2F1,2.p2	AK080799|Znhit1|70103|zinc finger, HIT domain containing 1	NM_027318|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr10_-_6979627_6979716	1.65693	HNF4A_NR2F1,2.p2	AK082372|Ppp1r14c|76142|protein phosphatase 1, regulatory (inhibitor) subunit 14c
mm9_v1_chr13_-_59871095_59871179	1.65574	HNF4A_NR2F1,2.p2	AK153820|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	AK169028|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	BC018547|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	AK007415|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	AK045175|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	BC085482|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	AK090000|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	NM_026921|Isca1|69046|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)
mm9_v1_chr16_+_18877129_18877328	1.65463	HNF4A_NR2F1,2.p2	BC052856|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	BC060181|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr2_-_73749080_73749118	1.65104	HNF4A_NR2F1,2.p2	BC116218|Atp5g3|228033|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)
mm9_v1_chr6_+_34362388_34362389	1.647	HNF4A_NR2F1,2.p2	BC086929|Akr1b7|11997|aldo-keto reductase family 1, member B7	J05663|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chr8_+_91045333_91045405	1.64198	HNF4A_NR2F1,2.p2	AF358134|Nkd1|93960|naked cuticle 1 homolog (Drosophila)	AF343352|Nkd1|93960|naked cuticle 1 homolog (Drosophila)
mm9_v1_chr5_+_138011078_138011117	1.63514	HNF4A_NR2F1,2.p2	NM_015799|Trfr2|50765|transferrin receptor 2	AK004848|Trfr2|50765|transferrin receptor 2	AK004965|Trfr2|50765|transferrin receptor 2
mm9_v1_chr6_+_83051509_83051651	1.63313	HNF4A_NR2F1,2.p2	NM_001081266|Ccdc142|243510|coiled-coil domain containing 142	AK038734|Ccdc142|243510|coiled-coil domain containing 142
mm9_v1_chr3_-_130951398_130951434	1.62911	HNF4A_NR2F1,2.p2	AK169238|Hadh|15107|hydroxyacyl-Coenzyme A dehydrogenase
mm9_v1_chr11_-_3404756_3404831	1.62875	HNF4A_NR2F1,2.p2	BC022915|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	AK171029|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	AK170114|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	BC051452|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	AK165718|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	AK136908|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	BC131635|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	BC131634|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	AK034272|Inpp5j|170835|inositol polyphosphate 5-phosphatase J	NM_172439|Inpp5j|170835|inositol polyphosphate 5-phosphatase J
mm9_v1_chr5_+_38430461_38430564	1.62295	HNF4A_NR2F1,2.p2	AK007700|Stx18|71116|syntaxin 18	AK170165|Stx18|71116|syntaxin 18	NM_026959|Stx18|71116|syntaxin 18	BC021362|Stx18|71116|syntaxin 18	AK169273|Stx18|71116|syntaxin 18	AK016910|Stx18|71116|syntaxin 18
mm9_v1_chr10_+_21712008_21712034	1.62154	HNF4A_NR2F1,2.p2	NM_001161849|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chr8_+_3587675_3587681	1.6208	HNF4A_NR2F1,2.p2	AK081728|2310057J16Rik|69697|RIKEN cDNA 2310057J16 gene
mm9_v1_chr17_+_47573557_47573589	1.6193	HNF4A_NR2F1,2.p2	BC006605|AI661453|224833|expressed sequence AI661453	NM_145489|AI661453|224833|expressed sequence AI661453
mm9_v1_chr6_+_108610606_108610702	1.61916	HNF4A_NR2F1,2.p2	AK048242|Bhlhe40|20893|basic helix-loop-helix family, member e40	NM_011498|Bhlhe40|20893|basic helix-loop-helix family, member e40	AK154935|Bhlhe40|20893|basic helix-loop-helix family, member e40	AK090032|Bhlhe40|20893|basic helix-loop-helix family, member e40	BC010720|Bhlhe40|20893|basic helix-loop-helix family, member e40	AF010305|Bhlhe40|20893|basic helix-loop-helix family, member e40	AF364051|Bhlhe40|20893|basic helix-loop-helix family, member e40
mm9_v1_chr17_-_15080040_15080162	1.61502	HNF4A_NR2F1,2.p2	AK004434|1190001L17Rik|68923|RIKEN cDNA 1190001L17 gene	AK077050|Wdr27|71682|WD repeat domain 27	NM_175173|Wdr27|71682|WD repeat domain 27	AK084217|Wdr27|71682|WD repeat domain 27	AK002615|Wdr27|71682|WD repeat domain 27
mm9_v1_chr7_+_127778702_127778797	1.61426	HNF4A_NR2F1,2.p2	NM_025899|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	AK005151|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	AK003975|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	AK004492|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	BC003423|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	AK088103|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	AK167377|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	AK077583|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2	AK075856|Uqcrc2|67003|ubiquinol cytochrome c reductase core protein 2
mm9_v1_chr8_+_73053432_73053453	1.61317	HNF4A_NR2F1,2.p2	AB154247|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr1_+_137732961_137733002	1.61083	HNF4A_NR2F1,2.p2	NM_001130174|Tnnt2|21956|troponin T2, cardiac	NM_001130175|Tnnt2|21956|troponin T2, cardiac	NM_001130177|Tnnt2|21956|troponin T2, cardiac	NM_001130178|Tnnt2|21956|troponin T2, cardiac	NM_001130179|Tnnt2|21956|troponin T2, cardiac	NM_001130180|Tnnt2|21956|troponin T2, cardiac	NM_001130181|Tnnt2|21956|troponin T2, cardiac	NM_011619|Tnnt2|21956|troponin T2, cardiac	AK086260|Tnnt2|21956|troponin T2, cardiac	AK146945|Tnnt2|21956|troponin T2, cardiac	AK163786|Tnnt2|21956|troponin T2, cardiac	AK164592|Tnnt2|21956|troponin T2, cardiac	AK168393|Tnnt2|21956|troponin T2, cardiac	AK169061|Tnnt2|21956|troponin T2, cardiac	L47600|Tnnt2|21956|troponin T2, cardiac	L47599|Tnnt2|21956|troponin T2, cardiac	L47552|Tnnt2|21956|troponin T2, cardiac	L47551|Tnnt2|21956|troponin T2, cardiac	L47549|Tnnt2|21956|troponin T2, cardiac	NM_001136083|Tnnt2|21956|troponin T2, cardiac	L47550|Tnnt2|21956|troponin T2, cardiac
mm9_v1_chr3_+_89856713_89856975	1.60395	HNF4A_NR2F1,2.p2	NM_025762|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	NM_027500|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK034749|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150324|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150423|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150831|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151002|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151263|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK017833|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC018438|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK051238|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC027190|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK214769|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AY533135|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr10_+_76038388_76038430	1.59869	HNF4A_NR2F1,2.p2	NM_080845|Ftcd|14317|formiminotransferase cyclodeaminase	AK165414|Ftcd|14317|formiminotransferase cyclodeaminase	BC024078|Ftcd|14317|formiminotransferase cyclodeaminase	BC010813|Ftcd|14317|formiminotransferase cyclodeaminase
mm9_v1_chr7_+_116662707_116662716	1.5975	HNF4A_NR2F1,2.p2	NM_011975|Rpl27a|26451|ribosomal protein L27A	AK138110|Rpl27a|26451|ribosomal protein L27A	AK007837|Rpl27a|26451|ribosomal protein L27A	AK010286|Rpl27a|26451|ribosomal protein L27A	AK167792|Rpl27a|26451|ribosomal protein L27A	AK011361|Rpl27a|26451|ribosomal protein L27A	AK150907|Rpl27a|26451|ribosomal protein L27A	BC086939|Rpl27a|26451|ribosomal protein L27A	AK008531|Rpl27a|26451|ribosomal protein L27A	AK167915|Rpl27a|26451|ribosomal protein L27A	X05021|Rpl27a|26451|ribosomal protein L27A
mm9_v1_chr7_-_20408020_20408046	1.59317	HNF4A_NR2F1,2.p2	M90397|Bcl3|12051|B-cell leukemia/lymphoma 3
mm9_v1_chr7_-_52744131_52744230	1.59233	HNF4A_NR2F1,2.p2	BC031710|Dhdh|71755|dihydrodiol dehydrogenase (dimeric)	AK154452|Dhdh|71755|dihydrodiol dehydrogenase (dimeric)	BC116414|Dhdh|71755|dihydrodiol dehydrogenase (dimeric)	AK005050|Dhdh|71755|dihydrodiol dehydrogenase (dimeric)	NM_027903|Dhdh|71755|dihydrodiol dehydrogenase (dimeric)
mm9_v1_chr8_-_108660711_108660729	1.59085	HNF4A_NR2F1,2.p2	BC096581|Esrp2|77411|epithelial splicing regulatory protein 2	AK168488|Esrp2|77411|epithelial splicing regulatory protein 2
mm9_v1_chr14_+_26661614_26661734	1.58897	HNF4A_NR2F1,2.p2	NM_013469|Anxa11|11744|annexin A11	U65986|Anxa11|11744|annexin A11	AK044203|Anxa11|11744|annexin A11	AK140375|Anxa11|11744|annexin A11	AK170850|Anxa11|11744|annexin A11	AK137158|Anxa11|11744|annexin A11	BC012875|Anxa11|11744|annexin A11
mm9_v1_chr19_-_55173908_55173946	1.58503	HNF4A_NR2F1,2.p2	BC019201|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial	NM_008149|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr8_-_22566988_22566988	1.58007	HNF4A_NR2F1,2.p2	NM_001177518|Gm7849|665927|predicted gene 7849	NM_001177526|Gm7861|665956|predicted gene 7861
mm9_v1_chr6_+_38383918_38383949	1.57975	HNF4A_NR2F1,2.p2	NM_177185|Ubn2|320538|ubinuclein 2	AK013733|Ubn2|320538|ubinuclein 2	BC051458|Ubn2|320538|ubinuclein 2
mm9_v1_chr8_+_4349587_4349614	1.57724	HNF4A_NR2F1,2.p2	AK131875|Ccl25|20300|chemokine (C-C motif) ligand 25	NM_009138|Ccl25|20300|chemokine (C-C motif) ligand 25	DQ158256|Ccl25|20300|chemokine (C-C motif) ligand 25	AK134138|Ccl25|20300|chemokine (C-C motif) ligand 25	AJ249480|Ccl25|20300|chemokine (C-C motif) ligand 25
mm9_v1_chr8_-_125736639_125736640	1.57272	HNF4A_NR2F1,2.p2	BC036138|Chmp1a|234852|chromatin modifying protein 1A
mm9_v1_chrX_-_156576312_156576363	1.57038	HNF4A_NR2F1,2.p2	AK168152|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK169289|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1	AK145718|Pdha1|18597|pyruvate dehydrogenase E1 alpha 1
mm9_v1_chr3_-_144423699_144423732	1.57019	HNF4A_NR2F1,2.p2	AK032511|Clca1|12722|chloride channel calcium activated 1	AF047838|Clca1|12722|chloride channel calcium activated 1	AK087213|Clca1|12722|chloride channel calcium activated 1	AK142211|Clca1|12722|chloride channel calcium activated 1	AK161805|Clca1|12722|chloride channel calcium activated 1	BC132342|Clca1|12722|chloride channel calcium activated 1	NM_009899|Clca1|12722|chloride channel calcium activated 1	AF052746|Clca1|12722|chloride channel calcium activated 1
mm9_v1_chr5_-_45841351_45841377	1.57012	HNF4A_NR2F1,2.p2	AK161660|Qdpr|110391|quinoid dihydropteridine reductase
mm9_v1_chr5_+_115461102_115461223	1.56444	HNF4A_NR2F1,2.p2	BC086646|Sppl3|74585|signal peptide peptidase 3	AK014709|Sppl3|74585|signal peptide peptidase 3
mm9_v1_chr14_+_55082960_55083081	1.55369	HNF4A_NR2F1,2.p2	AK144035|Lrp10|65107|low-density lipoprotein receptor-related protein 10	NM_022993|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK132169|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AK170325|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC052378|Lrp10|65107|low-density lipoprotein receptor-related protein 10	BC054447|Lrp10|65107|low-density lipoprotein receptor-related protein 10	AB042200|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr3_-_90047433_90047433	1.55214	HNF4A_NR2F1,2.p2	AB182651|Creb3l4|78284|cAMP responsive element binding protein 3-like 4	AK019928|Creb3l4|78284|cAMP responsive element binding protein 3-like 4	NM_030080|Creb3l4|78284|cAMP responsive element binding protein 3-like 4
mm9_v1_chr13_-_55672471_55672500	1.55087	HNF4A_NR2F1,2.p2	AK155237|Fam193b|212483|family with sequence similarity 193, member B	NM_145382|Fam193b|212483|family with sequence similarity 193, member B
mm9_v1_chr9_-_8004559_8004652	1.54909	HNF4A_NR2F1,2.p2	BC094313|Yap1|22601|yes-associated protein 1	BC014733|Yap1|22601|yes-associated protein 1	X80508|Yap1|22601|yes-associated protein 1	AK157234|Yap1|22601|yes-associated protein 1	NM_001171147|Yap1|22601|yes-associated protein 1	NM_009534|Yap1|22601|yes-associated protein 1
mm9_v1_chr7_+_105987354_105987515	1.54768	HNF4A_NR2F1,2.p2	NM_009519|Wnt11|22411|wingless-related MMTV integration site 11	X70800|Wnt11|22411|wingless-related MMTV integration site 11	BC125482|Wnt11|22411|wingless-related MMTV integration site 11	BC125484|Wnt11|22411|wingless-related MMTV integration site 11	BC144947|Wnt11|22411|wingless-related MMTV integration site 11	AK031573|Wnt11|22411|wingless-related MMTV integration site 11
mm9_v1_chr13_-_17786559_17786646	1.54692	HNF4A_NR2F1,2.p2	BC055852|5033411D12Rik|192136|RIKEN cDNA 5033411D12 gene	NM_138654|5033411D12Rik|192136|RIKEN cDNA 5033411D12 gene	BC064756|5033411D12Rik|192136|RIKEN cDNA 5033411D12 gene
mm9_v1_chr16_+_18776936_18776949	1.54678	HNF4A_NR2F1,2.p2	AK077282|Cldn5|12741|claudin 5	NM_013805|Cldn5|12741|claudin 5	AF035814|Cldn5|12741|claudin 5	BC083341|Cldn5|12741|claudin 5
mm9_v1_chrX_+_34337066_34337260	1.54589	HNF4A_NR2F1,2.p2	EF437333|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr4_-_102887390_102887488	1.54585	HNF4A_NR2F1,2.p2	AK169775|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK220330|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK049462|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK052968|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AK049180|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC115984|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	NM_177732|Slc35d1|242585|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
mm9_v1_chr4_+_118081908_118082012	1.54345	HNF4A_NR2F1,2.p2	AK011080|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_020000|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	NM_173719|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK147032|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK005422|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK148025|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC051683|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AK008759|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	BC021870|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)	AB041805|Med8|80509|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm9_v1_chr4_+_133074877_133074912	1.53959	HNF4A_NR2F1,2.p2	NM_001083916|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene	NM_133707|1810019J16Rik|69073|RIKEN cDNA 1810019J16 gene
mm9_v1_chr2_+_132607013_132607168	1.53687	HNF4A_NR2F1,2.p2	AK158857|Chgb|12653|chromogranin B	NM_007694|Chgb|12653|chromogranin B
mm9_v1_chr16_+_35939047_35939179	1.5324	HNF4A_NR2F1,2.p2	BC010312|Parp9|80285|poly (ADP-ribose) polymerase family, member 9	AK037903|Parp9|80285|poly (ADP-ribose) polymerase family, member 9	AK050032|Parp9|80285|poly (ADP-ribose) polymerase family, member 9	BC003281|Parp9|80285|poly (ADP-ribose) polymerase family, member 9
mm9_v1_chr1_+_174486066_174486068	1.5226	HNF4A_NR2F1,2.p2	AK037228|Vsig8|240916|V-set and immunoglobulin domain containing 8	NM_177723|Vsig8|240916|V-set and immunoglobulin domain containing 8
mm9_v1_chrX_+_137909951_137910122	1.52078	HNF4A_NR2F1,2.p2	AK133179|Col4a5|12830|collagen, type IV, alpha 5	NM_001163155|Col4a5|12830|collagen, type IV, alpha 5	NM_007736|Col4a5|12830|collagen, type IV, alpha 5	AB041350|Col4a5|12830|collagen, type IV, alpha 5	BC082788|Col4a5|12830|collagen, type IV, alpha 5
mm9_v1_chr5_-_31351296_31351296	1.52036	HNF4A_NR2F1,2.p2	BC065061|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_001177622|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr8_-_22466673_22466698	1.51851	HNF4A_NR2F1,2.p2	BC117042|Defa-rs1|13218|defensin, alpha, related sequence 1	BC117044|Defa-rs1|13218|defensin, alpha, related sequence 1	M33226|Defa-rs1|13218|defensin, alpha, related sequence 1	BC145556|Defa-rs1|13218|defensin, alpha, related sequence 1	BC171966|Defa-rs1|13218|defensin, alpha, related sequence 1	AK008584|Defa-rs1|13218|defensin, alpha, related sequence 1	NM_007844|Defa-rs1|13218|defensin, alpha, related sequence 1
mm9_v1_chr16_+_18776955_18776963	1.51782	HNF4A_NR2F1,2.p2	BC002016|Cldn5|12741|claudin 5
mm9_v1_chr11_-_69476100_69476163	1.51774	HNF4A_NR2F1,2.p2	AK080233|Mpdu1|24070|mannose-P-dolichol utilization defect 1	NM_011900|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr7_+_107520844_107520880	1.51426	HNF4A_NR2F1,2.p2	AK148365|C2cd3|277939|C2 calcium-dependent domain containing 3
mm9_v1_chr19_-_7681589_7681659	1.51351	HNF4A_NR2F1,2.p2	AK033535|Lgals12|56072|lectin, galactose binding, soluble 12	BC030890|Lgals12|56072|lectin, galactose binding, soluble 12	AF223223|Lgals12|56072|lectin, galactose binding, soluble 12
mm9_v1_chr8_-_22704936_22704936	1.50921	HNF4A_NR2F1,2.p2	NM_001177518|Gm7849|665927|predicted gene 7849	NM_001177526|Gm7861|665956|predicted gene 7861
mm9_v1_chr5_+_65194784_65194811	1.50804	HNF4A_NR2F1,2.p2	BC116938|Klf3|16599|Kruppel-like factor 3 (basic)	BC119214|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr17_-_36046961_36047023	1.50397	HNF4A_NR2F1,2.p2	AK049682|Atat1|73242|alpha tubulin acetyltransferase 1	AK014265|Atat1|73242|alpha tubulin acetyltransferase 1	AK011750|Atat1|73242|alpha tubulin acetyltransferase 1	AK034725|Atat1|73242|alpha tubulin acetyltransferase 1	AK133694|Atat1|73242|alpha tubulin acetyltransferase 1	BC030669|Atat1|73242|alpha tubulin acetyltransferase 1	AK011350|Atat1|73242|alpha tubulin acetyltransferase 1	BC028847|Atat1|73242|alpha tubulin acetyltransferase 1	AK011838|Atat1|73242|alpha tubulin acetyltransferase 1	AK028297|Atat1|73242|alpha tubulin acetyltransferase 1	NM_001142744|Atat1|73242|alpha tubulin acetyltransferase 1	NM_001142745|Atat1|73242|alpha tubulin acetyltransferase 1	NM_028476|Atat1|73242|alpha tubulin acetyltransferase 1
mm9_v1_chr5_-_138041861_138041972	1.50266	HNF4A_NR2F1,2.p2	AK019892|Mospd3|68929|motile sperm domain containing 3	AK088731|Mospd3|68929|motile sperm domain containing 3	BC003880|Mospd3|68929|motile sperm domain containing 3
mm9_v1_chr2_+_131763454_131763725	1.49713	HNF4A_NR2F1,2.p2	AK215651|Prnp|19122|prion protein	AK205534|Prnp|19122|prion protein	AK213884|Prnp|19122|prion protein	AK206219|Prnp|19122|prion protein
mm9_v1_chr9_+_119311561_119311618	1.4969	HNF4A_NR2F1,2.p2	BC106189|Acvr2b|11481|activin receptor IIB	M84120|Acvr2b|11481|activin receptor IIB	NM_007397|Acvr2b|11481|activin receptor IIB
mm9_v1_chr17_+_35607497_35607530	1.49215	HNF4A_NR2F1,2.p2	K00614|H2-Q10|15007|histocompatibility 2, Q region locus 10
mm9_v1_chr17_-_25974021_25974145	1.49061	HNF4A_NR2F1,2.p2	BC021549|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	NM_144816|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	AK140428|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)
mm9_v1_chr18_-_61874531_61874583	1.48785	HNF4A_NR2F1,2.p2	BC024866|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr19_-_7681665_7681671	1.48339	HNF4A_NR2F1,2.p2	AK136526|Lgals12|56072|lectin, galactose binding, soluble 12	NM_019516|Lgals12|56072|lectin, galactose binding, soluble 12	AK085660|Lgals12|56072|lectin, galactose binding, soluble 12	AF244978|Lgals12|56072|lectin, galactose binding, soluble 12
mm9_v1_chr4_-_109149274_109149287	1.48336	HNF4A_NR2F1,2.p2	BC028255|Rnf11|29864|ring finger protein 11
mm9_v1_chr16_+_35022507_35022577	1.47833	HNF4A_NR2F1,2.p2	AF169286|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	BC131899|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	BC131901|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	AK148143|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	BC027289|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	AK018144|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
mm9_v1_chr13_-_35085906_35085940	1.47635	HNF4A_NR2F1,2.p2	BC001983|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase	AK182614|Peci|23986|peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
mm9_v1_chr15_-_7348393_7348394	1.47297	HNF4A_NR2F1,2.p2	AK158909|Egflam|268780|EGF-like, fibronectin type III and laminin G domains
mm9_v1_chr15_-_89306531_89306619	1.47197	HNF4A_NR2F1,2.p2	BC011284|Arsa|11883|arylsulfatase A	AK029854|Arsa|11883|arylsulfatase A	AK165921|Arsa|11883|arylsulfatase A	AK004540|Arsa|11883|arylsulfatase A	AK132501|Arsa|11883|arylsulfatase A
mm9_v1_chr1_-_95532192_95532205	1.46901	HNF4A_NR2F1,2.p2	BC029875|Stk25|59041|serine/threonine kinase 25 (yeast)
mm9_v1_chr2_-_5863788_5863851	1.46673	HNF4A_NR2F1,2.p2	BC117994|Dhtkd1|209692|dehydrogenase E1 and transketolase domain containing 1	AK049272|Dhtkd1|209692|dehydrogenase E1 and transketolase domain containing 1	NM_001081131|Dhtkd1|209692|dehydrogenase E1 and transketolase domain containing 1
mm9_v1_chr3_+_94928435_94928438	1.4663	HNF4A_NR2F1,2.p2	AK144408|Tmod4|50874|tropomodulin 4	AK144535|Tmod4|50874|tropomodulin 4	NM_016712|Tmod4|50874|tropomodulin 4
mm9_v1_chr1_-_95531961_95532109	1.46573	HNF4A_NR2F1,2.p2	AF004934|Stk25|59041|serine/threonine kinase 25 (yeast)
mm9_v1_chr13_-_101514515_101514615	1.46409	HNF4A_NR2F1,2.p2	AK003111|Mrps36|66128|mitochondrial ribosomal protein S36	AK009966|Mrps36|66128|mitochondrial ribosomal protein S36	BC028499|Mrps36|66128|mitochondrial ribosomal protein S36	BC096576|Mrps36|66128|mitochondrial ribosomal protein S36	AK007512|Mrps36|66128|mitochondrial ribosomal protein S36	AK003765|Mrps36|66128|mitochondrial ribosomal protein S36	AK009050|Mrps36|66128|mitochondrial ribosomal protein S36	NM_001190264|Mrps36|66128|mitochondrial ribosomal protein S36	NM_025369|Mrps36|66128|mitochondrial ribosomal protein S36
mm9_v1_chr8_-_125760103_125760155	1.46322	HNF4A_NR2F1,2.p2	AK220503|Spata2L|78779|spermatogenesis associated 2-like	AK170267|Spata2L|78779|spermatogenesis associated 2-like	AK139339|Spata2L|78779|spermatogenesis associated 2-like	AK081234|Spata2L|78779|spermatogenesis associated 2-like	NM_030176|Spata2L|78779|spermatogenesis associated 2-like	AK019166|Spata2L|78779|spermatogenesis associated 2-like
mm9_v1_chr17_+_34491766_34491876	1.46284	HNF4A_NR2F1,2.p2	AK136521|Btnl2|547431|butyrophilin-like 2	NM_079835|Btnl2|547431|butyrophilin-like 2	BC141103|Btnl2|547431|butyrophilin-like 2
mm9_v1_chr10_-_94878117_94878117	1.46254	HNF4A_NR2F1,2.p2	NM_001168656|Socs2|216233|suppressor of cytokine signaling 2
mm9_v1_chr16_+_35022488_35022506	1.45908	HNF4A_NR2F1,2.p2	NM_023587|Ptplb|70757|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
mm9_v1_chr8_+_48072271_48072307	1.45679	HNF4A_NR2F1,2.p2	AK046881|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK046797|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_177304|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079642|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK079352|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK038460|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6	BC096376|Enpp6|320981|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm9_v1_chr11_+_120353171_120353266	1.45493	HNF4A_NR2F1,2.p2	AK083831|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	AK008038|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	AF188712|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	AK050282|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10	BC003222|Slc25a10|27376|solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10
mm9_v1_chr6_-_38825815_38825951	1.45417	HNF4A_NR2F1,2.p2	AF333791|Hipk2|15258|homeodomain interacting protein kinase 2	AF333792|Hipk2|15258|homeodomain interacting protein kinase 2	AF273680|Hipk2|15258|homeodomain interacting protein kinase 2	BC031904|Hipk2|15258|homeodomain interacting protein kinase 2	AF170301|Hipk2|15258|homeodomain interacting protein kinase 2	AF170302|Hipk2|15258|homeodomain interacting protein kinase 2	AF077659|Hipk2|15258|homeodomain interacting protein kinase 2
mm9_v1_chr2_-_127270240_127270321	1.45165	HNF4A_NR2F1,2.p2	BC030182|Fahd2a|68126|fumarylacetoacetate hydrolase domain containing 2A	AK170875|Fahd2a|68126|fumarylacetoacetate hydrolase domain containing 2A	AK002291|Fahd2a|68126|fumarylacetoacetate hydrolase domain containing 2A	AK080868|Fahd2a|68126|fumarylacetoacetate hydrolase domain containing 2A	AK005134|Fahd2a|68126|fumarylacetoacetate hydrolase domain containing 2A	NM_029629|Fahd2a|68126|fumarylacetoacetate hydrolase domain containing 2A
mm9_v1_chr12_+_32008372_32008419	1.44883	HNF4A_NR2F1,2.p2	AK141833|Lamb1|16777|laminin B1
mm9_v1_chr11_+_100948587_100948649	1.4429	HNF4A_NR2F1,2.p2	NM_001159384|Mlx|21428|MAX-like protein X	NM_001159385|Mlx|21428|MAX-like protein X	NM_011550|Mlx|21428|MAX-like protein X	AK011478|Mlx|21428|MAX-like protein X	BC031380|Mlx|21428|MAX-like protein X	U43607|Mlx|21428|MAX-like protein X	BC038004|Mlx|21428|MAX-like protein X	AK142605|Mlx|21428|MAX-like protein X	AF213670|Mlx|21428|MAX-like protein X	AF213671|Mlx|21428|MAX-like protein X	AF213672|Mlx|21428|MAX-like protein X	U43548|Mlx|21428|MAX-like protein X	AK177451|Mlx|21428|MAX-like protein X
mm9_v1_chr6_+_28430311_28430460	1.44067	HNF4A_NR2F1,2.p2	AK133837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	NM_019776|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK167576|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK159837|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK088028|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK161591|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AB021491|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK034914|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	AK162432|Snd1|56463|staphylococcal nuclease and tudor domain containing 1	BC007126|Snd1|56463|staphylococcal nuclease and tudor domain containing 1
mm9_v1_chr17_-_56214328_56214451	1.43859	HNF4A_NR2F1,2.p2	BC016412|Ubxn6|66530|UBX domain protein 6	AK148170|Ubxn6|66530|UBX domain protein 6	BC049963|Ubxn6|66530|UBX domain protein 6	NM_024432|Ubxn6|66530|UBX domain protein 6	AK008942|Ubxn6|66530|UBX domain protein 6	AF272895|Ubxn6|66530|UBX domain protein 6	AK161273|Ubxn6|66530|UBX domain protein 6	AK075705|Ubxn6|66530|UBX domain protein 6	AK082510|Ubxn6|66530|UBX domain protein 6
mm9_v1_chr19_+_46782153_46782204	1.43845	HNF4A_NR2F1,2.p2	AK009814|As3mt|57344|arsenic (+3 oxidation state) methyltransferase
mm9_v1_chr5_-_34125155_34125234	1.43554	HNF4A_NR2F1,2.p2	AK193705|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1
mm9_v1_chr4_-_43044241_43044275	1.43445	HNF4A_NR2F1,2.p2	AK002793|Stoml2|66592|stomatin (Epb7.2)-like 2	BC069941|Stoml2|66592|stomatin (Epb7.2)-like 2	BC003425|Stoml2|66592|stomatin (Epb7.2)-like 2	NM_023231|Stoml2|66592|stomatin (Epb7.2)-like 2	AF323178|Stoml2|66592|stomatin (Epb7.2)-like 2
mm9_v1_chr15_-_78034648_78034687	1.43275	HNF4A_NR2F1,2.p2	AK131986|Pvalb|19293|parvalbumin
mm9_v1_chr11_-_21222127_21222131	1.43184	HNF4A_NR2F1,2.p2	AK177417|Ugp2|216558|UDP-glucose pyrophosphorylase 2
mm9_v1_chr6_+_34362333_34362371	1.42594	HNF4A_NR2F1,2.p2	AK147775|Akr1b7|11997|aldo-keto reductase family 1, member B7	NM_009731|Akr1b7|11997|aldo-keto reductase family 1, member B7	AK002705|Akr1b7|11997|aldo-keto reductase family 1, member B7
mm9_v1_chr4_-_58925575_58925638	1.42548	HNF4A_NR2F1,2.p2	AK087690|AI314180|230249|expressed sequence AI314180	BC058684|AI314180|230249|expressed sequence AI314180	NM_172381|AI314180|230249|expressed sequence AI314180	AK041579|AI314180|230249|expressed sequence AI314180
mm9_v1_chr4_-_134091164_134091245	1.42172	HNF4A_NR2F1,2.p2	AK080126|Fam54b|76824|family with sequence similarity 54, member B	AK010825|Fam54b|76824|family with sequence similarity 54, member B	AK089141|Fam54b|76824|family with sequence similarity 54, member B	AK145362|Fam54b|76824|family with sequence similarity 54, member B	AK171703|Fam54b|76824|family with sequence similarity 54, member B	AK169047|Fam54b|76824|family with sequence similarity 54, member B
mm9_v1_chr10_-_80958977_80959145	1.4191	HNF4A_NR2F1,2.p2	AK019409|Ncln|103425|nicalin homolog (zebrafish)	AK048954|Ncln|103425|nicalin homolog (zebrafish)	BC019501|Ncln|103425|nicalin homolog (zebrafish)	NM_134009|Ncln|103425|nicalin homolog (zebrafish)	AK128887|Ncln|103425|nicalin homolog (zebrafish)
mm9_v1_chr1_+_75233276_75233316	1.41773	HNF4A_NR2F1,2.p2	NM_001159885|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr15_-_31297286_31297513	1.41149	HNF4A_NR2F1,2.p2	AK089667|Ankrd33b|67434|ankyrin repeat domain 33B	AK170894|Ankrd33b|67434|ankyrin repeat domain 33B	AK017844|Ankrd33b|67434|ankyrin repeat domain 33B	AK002572|Ankrd33b|67434|ankyrin repeat domain 33B	AK012871|Ankrd33b|67434|ankyrin repeat domain 33B	AK156757|Ankrd33b|67434|ankyrin repeat domain 33B	BC100327|Ankrd33b|67434|ankyrin repeat domain 33B	NM_001164441|Ankrd33b|67434|ankyrin repeat domain 33B	NM_026153|Ankrd33b|67434|ankyrin repeat domain 33B	NM_027496|Ankrd33b|67434|ankyrin repeat domain 33B
mm9_v1_chr7_-_29349236_29349293	1.40751	HNF4A_NR2F1,2.p2	AK017713|Pak4|70584|p21 protein (Cdc42/Rac)-activated kinase 4
mm9_v1_chr3_-_103541882_103541927	1.40316	HNF4A_NR2F1,2.p2	AK002518|Olfml3|99543|olfactomedin-like 3	AK131879|Olfml3|99543|olfactomedin-like 3	AK076084|Olfml3|99543|olfactomedin-like 3	AK143728|Olfml3|99543|olfactomedin-like 3	NM_133859|Olfml3|99543|olfactomedin-like 3
mm9_v1_chr1_-_75176926_75176956	1.40145	HNF4A_NR2F1,2.p2	AK004605|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK150853|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK152584|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6	AK168642|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr7_-_29965419_29965499	1.40073	HNF4A_NR2F1,2.p2	BC005717|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK027973|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK150982|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK167948|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK159216|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	AK168886|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr15_-_97996008_97996055	1.39779	HNF4A_NR2F1,2.p2	NM_001170711|Asb8|78541|ankyrin repeat and SOCS box-containing 8	AK016001|Asb8|78541|ankyrin repeat and SOCS box-containing 8
mm9_v1_chr16_+_95924061_95924067	1.39655	HNF4A_NR2F1,2.p2	AK128933|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK152750|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK143687|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK144974|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK151315|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153339|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153478|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr10_-_80522871_80522963	1.39443	HNF4A_NR2F1,2.p2	AK039966|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	BC003836|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	NM_024499|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK051005|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK079168|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK165557|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm9_v1_chr5_-_146345586_146345608	1.38998	HNF4A_NR2F1,2.p2	AB033414|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A	NM_001105159|Cyp3a41b|100041375|cytochrome P450, family 3, subfamily a, polypeptide 41B	NM_017396|Cyp3a41a|53973|cytochrome P450, family 3, subfamily a, polypeptide 41A
mm9_v1_chr9_+_108698323_108698461	1.38936	HNF4A_NR2F1,2.p2	BC039922|Ip6k2|76500|inositol hexaphosphate kinase 2	NM_029634|Ip6k2|76500|inositol hexaphosphate kinase 2	BC060059|Ip6k2|76500|inositol hexaphosphate kinase 2
mm9_v1_chr8_+_22887026_22887070	1.38875	HNF4A_NR2F1,2.p2	NM_007843|Defb1|13214|defensin beta 1	AK142544|Defb1|13214|defensin beta 1	BC024380|Defb1|13214|defensin beta 1
mm9_v1_chr1_-_182160174_182160194	1.38781	HNF4A_NR2F1,2.p2	U57325|Psen2|19165|presenilin 2
mm9_v1_chr9_-_54407955_54407999	1.38345	HNF4A_NR2F1,2.p2	AK005347|Cib2|56506|calcium and integrin binding family member 2	AK013240|Cib2|56506|calcium and integrin binding family member 2
mm9_v1_chr8_-_108660736_108660873	1.38211	HNF4A_NR2F1,2.p2	AK088755|Esrp2|77411|epithelial splicing regulatory protein 2	BC031444|Esrp2|77411|epithelial splicing regulatory protein 2	NM_176838|Esrp2|77411|epithelial splicing regulatory protein 2
mm9_v1_chr4_-_40800995_40801058	1.37917	HNF4A_NR2F1,2.p2	BC026824|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	J03880|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	AK154393|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	BC053006|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	NM_022305|B4galt1|14595|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm9_v1_chr17_-_24484196_24484196	1.37594	HNF4A_NR2F1,2.p2	AB112584|Abca17|381072|ATP-binding cassette, sub-family A (ABC1), member 17	NM_001031621|Abca17|381072|ATP-binding cassette, sub-family A (ABC1), member 17
mm9_v1_chr5_+_23900197_23900242	1.37341	HNF4A_NR2F1,2.p2	AK014688|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK076315|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK049152|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK166704|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK170334|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK014319|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK030624|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	AK038760|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm9_v1_chr11_-_98261715_98261736	1.3703	HNF4A_NR2F1,2.p2	AK170817|Pgap3|320655|post-GPI attachment to proteins 3	AK052486|Pgap3|320655|post-GPI attachment to proteins 3	AK078974|Pgap3|320655|post-GPI attachment to proteins 3	BC035945|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr11_+_69906145_69906162	1.37026	HNF4A_NR2F1,2.p2	BC011197|Asgr2|11890|asialoglycoprotein receptor 2	NM_007493|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr7_+_3290587_3290611	1.36808	HNF4A_NR2F1,2.p2	AK052258|Myadm|50918|myeloid-associated differentiation marker	AK053414|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr3_-_94462687_94462757	1.36304	HNF4A_NR2F1,2.p2	AF002860|Tuft1|22156|tuftelin 1	BC019213|Tuft1|22156|tuftelin 1	AK132488|Tuft1|22156|tuftelin 1	AF047704|Tuft1|22156|tuftelin 1	NM_011656|Tuft1|22156|tuftelin 1	AK171705|Tuft1|22156|tuftelin 1
mm9_v1_chr11_-_120668581_120668636	1.35642	HNF4A_NR2F1,2.p2	AK078721|Fasn|14104|fatty acid synthase
mm9_v1_chr3_+_94176747_94176784	1.35634	HNF4A_NR2F1,2.p2	NM_011281|Rorc|19885|RAR-related orphan receptor gamma	AK160122|Rorc|19885|RAR-related orphan receptor gamma	BC014804|Rorc|19885|RAR-related orphan receptor gamma	U43508|Rorc|19885|RAR-related orphan receptor gamma
mm9_v1_chr13_+_4573320_4573394	1.3558	HNF4A_NR2F1,2.p2	AK020439|Akr1c21|77337|aldo-keto reductase family 1, member C21	NM_029901|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC061057|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC013531|Akr1c21|77337|aldo-keto reductase family 1, member C21	BC091761|Akr1c21|77337|aldo-keto reductase family 1, member C21	AB178898|Akr1c21|77337|aldo-keto reductase family 1, member C21	AY742217|Akr1c21|77337|aldo-keto reductase family 1, member C21
mm9_v1_chr11_+_100488379_100488445	1.34994	HNF4A_NR2F1,2.p2	
mm9_v1_chr19_-_7785715_7785799	1.34845	HNF4A_NR2F1,2.p2	AF529221|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	BC021384|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052752|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052603|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	NM_144785|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19
mm9_v1_chr9_+_89949315_89949397	1.3464	HNF4A_NR2F1,2.p2	AK157376|Ctsh|13036|cathepsin H	AK171550|Ctsh|13036|cathepsin H	U06119|Ctsh|13036|cathepsin H	BC080767|Ctsh|13036|cathepsin H	AK151877|Ctsh|13036|cathepsin H	BC006878|Ctsh|13036|cathepsin H	AK017638|Ctsh|13036|cathepsin H	AK160026|Ctsh|13036|cathepsin H	AK167498|Ctsh|13036|cathepsin H	AK150583|Ctsh|13036|cathepsin H	AK149949|Ctsh|13036|cathepsin H
mm9_v1_chr7_-_117509277_117509385	1.34595	HNF4A_NR2F1,2.p2	BC015069|Sbf2|319934|SET binding factor 2
mm9_v1_chr11_-_32109606_32109711	1.34187	HNF4A_NR2F1,2.p2	
mm9_v1_chr10_-_77814444_77814444	1.34094	HNF4A_NR2F1,2.p2	AK075715|Agpat3|28169|1-acylglycerol-3-phosphate O-acyltransferase 3	NM_053014|Agpat3|28169|1-acylglycerol-3-phosphate O-acyltransferase 3
mm9_v1_chr5_+_65194627_65194653	1.33818	HNF4A_NR2F1,2.p2	AK157576|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr15_+_4677207_4677220	1.33444	HNF4A_NR2F1,2.p2	NM_016704|C6|12274|complement component 6	AF184900|C6|12274|complement component 6	AK041057|C6|12274|complement component 6	BC011251|C6|12274|complement component 6
mm9_v1_chr4_-_11003327_11003375	1.32459	HNF4A_NR2F1,2.p2	AK009547|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene	AK041507|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene	NM_001085493|2310030N02Rik|76947|RIKEN cDNA 2310030N02 gene
mm9_v1_chr11_+_96184439_96184443	1.32365	HNF4A_NR2F1,2.p2	NM_001079869|Hoxb3|15410|homeobox B3	S35738|Hoxb3|15410|homeobox B3
mm9_v1_chr11_-_5607667_5607715	1.32306	HNF4A_NR2F1,2.p2	BC029262|Mrps24|64660|mitochondrial ribosomal protein S24	AK010590|Mrps24|64660|mitochondrial ribosomal protein S24	AK003117|Mrps24|64660|mitochondrial ribosomal protein S24	AK007338|Mrps24|64660|mitochondrial ribosomal protein S24	AK014099|Mrps24|64660|mitochondrial ribosomal protein S24	AK012461|Mrps24|64660|mitochondrial ribosomal protein S24	NM_026080|Mrps24|64660|mitochondrial ribosomal protein S24
mm9_v1_chr15_+_10153734_10153771	1.32128	HNF4A_NR2F1,2.p2	M22957|Prlr|19116|prolactin receptor	M22959|Prlr|19116|prolactin receptor	AK052679|Prlr|19116|prolactin receptor
mm9_v1_chr5_-_31504348_31504414	1.3187	HNF4A_NR2F1,2.p2	AK154195|Zfp513|101023|zinc finger protein 513	NM_001177901|Zfp513|101023|zinc finger protein 513
mm9_v1_chr6_-_97262013_97262028	1.31469	HNF4A_NR2F1,2.p2	BC058262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr4_-_116313684_116313733	1.31076	HNF4A_NR2F1,2.p2	AK005162|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011157|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011209|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011221|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr19_-_47165086_47165134	1.31067	HNF4A_NR2F1,2.p2	AK008345|Usmg5|66477|upregulated during skeletal muscle growth 5	BC087919|Usmg5|66477|upregulated during skeletal muscle growth 5	NM_023211|Usmg5|66477|upregulated during skeletal muscle growth 5	AK038457|Usmg5|66477|upregulated during skeletal muscle growth 5	AJ290947|Usmg5|66477|upregulated during skeletal muscle growth 5	AK088856|Usmg5|66477|upregulated during skeletal muscle growth 5
mm9_v1_chr5_+_138011057_138011067	1.3087	HNF4A_NR2F1,2.p2	AK155526|Trfr2|50765|transferrin receptor 2
mm9_v1_chr19_-_8293322_8293389	1.30551	HNF4A_NR2F1,2.p2	AF536196|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AK052597|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	BC126952|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	NM_172776|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AF536195|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene
mm9_v1_chr4_+_101091913_101091947	1.30063	HNF4A_NR2F1,2.p2	NM_001177605|Ak4|11639|adenylate kinase 4	AK154374|Ak4|11639|adenylate kinase 4	NM_001177604|Ak4|11639|adenylate kinase 4
mm9_v1_chr6_+_124959685_124959822	1.29915	HNF4A_NR2F1,2.p2	AK086185|Zfp384|269800|zinc finger protein 384	BC064013|Zfp384|269800|zinc finger protein 384	NM_175557|Zfp384|269800|zinc finger protein 384
mm9_v1_chr10_+_45009110_45009287	1.29823	HNF4A_NR2F1,2.p2	AK052325|Popdc3|78977|popeye domain containing 3	NM_024286|Popdc3|78977|popeye domain containing 3	AK039691|Popdc3|78977|popeye domain containing 3	BC114993|Popdc3|78977|popeye domain containing 3
mm9_v1_chr8_+_95351212_95351327	1.29823	HNF4A_NR2F1,2.p2	BC070430|Mmp2|17390|matrix metallopeptidase 2	NM_008610|Mmp2|17390|matrix metallopeptidase 2	AK148184|Mmp2|17390|matrix metallopeptidase 2
mm9_v1_chr1_+_74283325_74283370	1.29566	HNF4A_NR2F1,2.p2	BC115750|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr3_+_104591946_104591954	1.29135	HNF4A_NR2F1,2.p2	AK011599|Rhoc|11853|ras homolog gene family, member C	NM_007484|Rhoc|11853|ras homolog gene family, member C	AK152802|Rhoc|11853|ras homolog gene family, member C
mm9_v1_chr2_-_93797176_93797261	1.29109	HNF4A_NR2F1,2.p2	AK143447|Gm13889|620695|predicted gene 13889	NM_001145034|Gm13889|620695|predicted gene 13889
mm9_v1_chr11_-_100831909_100831946	1.28315	HNF4A_NR2F1,2.p2	BC110698|Ptrf|19285|polymerase I and transcript release factor	AK169463|Ptrf|19285|polymerase I and transcript release factor	NM_008986|Ptrf|19285|polymerase I and transcript release factor
mm9_v1_chr7_+_3290622_3290631	1.28301	HNF4A_NR2F1,2.p2	BC056355|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr7_-_20116759_20116855	1.27837	HNF4A_NR2F1,2.p2	AK202853|Lrrc68|232947|leucine rich repeat containing 68
mm9_v1_chr11_-_88712812_88712825	1.27375	HNF4A_NR2F1,2.p2	U95145|Akap1|11640|A kinase (PRKA) anchor protein 1	U95146|Akap1|11640|A kinase (PRKA) anchor protein 1	NM_009648|Akap1|11640|A kinase (PRKA) anchor protein 1	AK132749|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr6_+_148303173_148303234	1.2733	HNF4A_NR2F1,2.p2	AK004068|Rps4y2|66184|ribosomal protein S4, Y-linked 2	AK012382|Rps4y2|66184|ribosomal protein S4, Y-linked 2	AK132160|Rps4y2|66184|ribosomal protein S4, Y-linked 2	BC047994|Rps4y2|66184|ribosomal protein S4, Y-linked 2
mm9_v1_chr8_-_46467524_46467644	1.27052	HNF4A_NR2F1,2.p2	BC035537|Fam149a|212326|family with sequence similarity 149, member A	AK141607|Fam149a|212326|family with sequence similarity 149, member A	AK140440|Fam149a|212326|family with sequence similarity 149, member A	NM_153535|Fam149a|212326|family with sequence similarity 149, member A
mm9_v1_chr10_-_120913138_120913382	1.26828	HNF4A_NR2F1,2.p2	AK167627|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	AF332864|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	BC011511|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	NM_138956|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	BC071204|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	AK155495|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3	BC055023|Rassf3|192678|Ras association (RalGDS/AF-6) domain family member 3
mm9_v1_chr9_-_54407862_54407915	1.26814	HNF4A_NR2F1,2.p2	AB016080|Cib2|56506|calcium and integrin binding family member 2	NM_019686|Cib2|56506|calcium and integrin binding family member 2	BC005739|Cib2|56506|calcium and integrin binding family member 2
mm9_v1_chr3_-_148617598_148617598	1.26599	HNF4A_NR2F1,2.p2	NM_001081298|Lphn2|99633|latrophilin 2
mm9_v1_chr19_+_9016466_9016538	1.25939	HNF4A_NR2F1,2.p2	AK088158|Mta2|23942|metastasis-associated gene family, member 2	AK157717|Mta2|23942|metastasis-associated gene family, member 2	AF159259|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr19_+_29175864_29175994	1.25746	HNF4A_NR2F1,2.p2	AK009709|Rcl1|59028|RNA terminal phosphate cyclase-like 1	NM_021525|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK168153|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK012585|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK077751|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC053404|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC004574|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK153377|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AJ276895|Rcl1|59028|RNA terminal phosphate cyclase-like 1
mm9_v1_chr11_+_58013057_58013152	1.25422	HNF4A_NR2F1,2.p2	AK088315|Igtp|16145|interferon gamma induced GTPase	NM_018738|Igtp|16145|interferon gamma induced GTPase	AK152337|Igtp|16145|interferon gamma induced GTPase	AK165065|Igtp|16145|interferon gamma induced GTPase	AK169307|Igtp|16145|interferon gamma induced GTPase	AK151779|Igtp|16145|interferon gamma induced GTPase	AK153436|Igtp|16145|interferon gamma induced GTPase	AK002843|Igtp|16145|interferon gamma induced GTPase	AK149817|Igtp|16145|interferon gamma induced GTPase	AK151860|Igtp|16145|interferon gamma induced GTPase	AK152483|Igtp|16145|interferon gamma induced GTPase	U53219|Igtp|16145|interferon gamma induced GTPase
mm9_v1_chr7_+_117161821_117161836	1.25384	HNF4A_NR2F1,2.p2	AK079903|Ipo7|233726|importin 7	AK148820|Ipo7|233726|importin 7	AK169981|Ipo7|233726|importin 7
mm9_v1_chr11_+_102051080_102051165	1.25223	HNF4A_NR2F1,2.p2	AK165395|G6pc3|68401|glucose 6 phosphatase, catalytic, 3	AY186239|G6pc3|68401|glucose 6 phosphatase, catalytic, 3
mm9_v1_chr8_+_73053287_73053425	1.25093	HNF4A_NR2F1,2.p2	BC003739|Fkbp8|14232|FK506 binding protein 8	AY225340|Fkbp8|14232|FK506 binding protein 8	AK216136|Fkbp8|14232|FK506 binding protein 8	AF030635|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr1_-_121318824_121318824	1.25057	HNF4A_NR2F1,2.p2	AK132352|Inhbb|16324|inhibin beta-B	NM_008381|Inhbb|16324|inhibin beta-B
mm9_v1_chr7_+_3290516_3290583	1.25031	HNF4A_NR2F1,2.p2	AJ001616|Myadm|50918|myeloid-associated differentiation marker	NM_016969|Myadm|50918|myeloid-associated differentiation marker	NM_001093765|Myadm|50918|myeloid-associated differentiation marker	AK089538|Myadm|50918|myeloid-associated differentiation marker	AK149962|Myadm|50918|myeloid-associated differentiation marker	AK159160|Myadm|50918|myeloid-associated differentiation marker
mm9_v1_chr19_-_61304260_61304356	1.24719	HNF4A_NR2F1,2.p2	BC150696|Csf2ra|12982|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)	M85078|Csf2ra|12982|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)	NM_009970|Csf2ra|12982|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
mm9_v1_chr8_-_22814073_22814118	1.24713	HNF4A_NR2F1,2.p2	AY761184|AY761184|382000|cDNA sequence AY761184	AK008498|AY761184|382000|cDNA sequence AY761184	NM_001007582|AY761184|382000|cDNA sequence AY761184
mm9_v1_chr9_-_8004450_8004510	1.24684	HNF4A_NR2F1,2.p2	BC039125|Yap1|22601|yes-associated protein 1	AK198743|Yap1|22601|yes-associated protein 1
mm9_v1_chr8_+_3516840_3516873	1.2427	HNF4A_NR2F1,2.p2	AK162641|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK089095|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr8_-_109572384_109572545	1.24009	HNF4A_NR2F1,2.p2	AK075957|Pdf|68023|peptide deformylase (mitochondrial)	NM_026513|Pdf|68023|peptide deformylase (mitochondrial)
mm9_v1_chr1_-_95532227_95532238	1.23967	HNF4A_NR2F1,2.p2	BC052913|Stk25|59041|serine/threonine kinase 25 (yeast)
mm9_v1_chr19_-_10175990_10176185	1.23839	HNF4A_NR2F1,2.p2	AF126798|Fads2|56473|fatty acid desaturase 2	NM_019699|Fads2|56473|fatty acid desaturase 2	AK143524|Fads2|56473|fatty acid desaturase 2	AK032633|Fads2|56473|fatty acid desaturase 2	AK083282|Fads2|56473|fatty acid desaturase 2	AK031337|Fads2|56473|fatty acid desaturase 2
mm9_v1_chr13_-_43655487_43655573	1.2356	HNF4A_NR2F1,2.p2	AK018089|Ccdc90a|76137|coiled-coil domain containing 90A	NM_001081059|Ccdc90a|76137|coiled-coil domain containing 90A	BC113195|Ccdc90a|76137|coiled-coil domain containing 90A	AK041849|Ccdc90a|76137|coiled-coil domain containing 90A
mm9_v1_chr9_-_107571304_107571323	1.22959	HNF4A_NR2F1,2.p2	BC021324|Slc38a3|76257|solute carrier family 38, member 3
mm9_v1_chr2_+_58999028_58999140	1.22767	HNF4A_NR2F1,2.p2	BC079848|Pkp4|227937|plakophilin 4	BC082578|Pkp4|227937|plakophilin 4	BC042746|Pkp4|227937|plakophilin 4
mm9_v1_chr11_+_115626733_115626761	1.22139	HNF4A_NR2F1,2.p2	NM_028014|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene	AK155233|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chrX_-_100958883_100958891	1.22134	HNF4A_NR2F1,2.p2	BC158129|Gm6222|621381|predicted pseudogene 6222	NM_001170979|Gm6222|621381|predicted pseudogene 6222
mm9_v1_chr5_+_135408221_135408290	1.21812	HNF4A_NR2F1,2.p2	AY138964|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AY354925|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AY354926|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AY354927|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	NM_024479|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AK042578|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AK132481|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	AK081683|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)	BC002286|Wbscr27|79565|Williams Beuren syndrome chromosome region 27 (human)
mm9_v1_chr9_-_64585562_64585585	1.21661	HNF4A_NR2F1,2.p2	AK014268|Rab11a|53869|RAB11a, member RAS oncogene family	AK147122|Rab11a|53869|RAB11a, member RAS oncogene family	NM_017382|Rab11a|53869|RAB11a, member RAS oncogene family
mm9_v1_chr5_-_65826956_65826968	1.21612	HNF4A_NR2F1,2.p2	AK167462|Ugdh|22235|UDP-glucose dehydrogenase	AF061017|Ugdh|22235|UDP-glucose dehydrogenase	AK146693|Ugdh|22235|UDP-glucose dehydrogenase	AK168563|Ugdh|22235|UDP-glucose dehydrogenase	AK162298|Ugdh|22235|UDP-glucose dehydrogenase	AK168508|Ugdh|22235|UDP-glucose dehydrogenase
mm9_v1_chr3_-_103541868_103541874	1.21425	HNF4A_NR2F1,2.p2	BC005485|Olfml3|99543|olfactomedin-like 3
mm9_v1_chr18_-_61195852_61195875	1.21384	HNF4A_NR2F1,2.p2	BC019986|Cdx1|12590|caudal type homeobox 1	NM_009880|Cdx1|12590|caudal type homeobox 1
mm9_v1_chr9_-_123541444_123541682	1.21122	HNF4A_NR2F1,2.p2	AK163340|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B	AF075261|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B	AK164713|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B	AK164706|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B	BC013484|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B	AK143893|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B	AK144038|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B	NM_011731|Slc6a20b|22599|solute carrier family 6 (neurotransmitter transporter), member 20B
mm9_v1_chr5_+_23899973_23899973	1.20744	HNF4A_NR2F1,2.p2	BC015301|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8	NM_029020|Abcb8|74610|ATP-binding cassette, sub-family B (MDR/TAP), member 8
mm9_v1_chr11_-_32122259_32122296	1.20375	HNF4A_NR2F1,2.p2	AK144437|Rhbdf1|13650|rhomboid family 1 (Drosophila)	NM_010117|Rhbdf1|13650|rhomboid family 1 (Drosophila)
mm9_v1_chr11_+_95246169_95246271	1.20285	HNF4A_NR2F1,2.p2	AK160124|Slc35b1|110172|solute carrier family 35, member B1	AK007711|Slc35b1|110172|solute carrier family 35, member B1	AK002961|Slc35b1|110172|solute carrier family 35, member B1	D87990|Slc35b1|110172|solute carrier family 35, member B1	NM_016752|Slc35b1|110172|solute carrier family 35, member B1	BC002029|Slc35b1|110172|solute carrier family 35, member B1
mm9_v1_chr15_+_78707595_78707620	1.19311	HNF4A_NR2F1,2.p2	BC026802|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1	NM_145929|Gga1|106039|golgi associated, gamma adaptin ear containing, ARF binding protein 1
mm9_v1_chr11_+_69137459_69137503	1.19221	HNF4A_NR2F1,2.p2	NM_001024206|Trappc1|245828|trafficking protein particle complex 1
mm9_v1_chr13_+_23627286_23627290	1.19194	HNF4A_NR2F1,2.p2	NM_145073|Hist1h3g|97908|histone cluster 1, H3g	BC125355|Hist1h3g|97908|histone cluster 1, H3g	BC125357|Hist1h3g|97908|histone cluster 1, H3g
mm9_v1_chr11_+_105829223_105829281	1.18955	HNF4A_NR2F1,2.p2	AK154632|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	NM_207624|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	AK161020|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	BC110362|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	J03940|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	BC040404|Ace|11421|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm9_v1_chr7_+_80885175_80885216	1.1888	HNF4A_NR2F1,2.p2	NM_001162532|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr11_-_96691261_96691289	1.18799	HNF4A_NR2F1,2.p2	AK152040|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK153529|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	NM_008686|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr19_-_47165137_47165183	1.1851	HNF4A_NR2F1,2.p2	BC024355|Usmg5|66477|upregulated during skeletal muscle growth 5
mm9_v1_chr10_-_39745065_39745113	1.17836	HNF4A_NR2F1,2.p2	AK089961|AI317395|215929|expressed sequence AI317395	NM_144821|AI317395|215929|expressed sequence AI317395
mm9_v1_chr18_+_78033276_78033456	1.17588	HNF4A_NR2F1,2.p2	AK154724|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	NM_013831|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	AK033996|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	AK157994|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	AK132418|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	BC002123|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	AK154284|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	BC057654|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	CT010308|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2	Y18101|Pstpip2|19201|proline-serine-threonine phosphatase-interacting protein 2
mm9_v1_chr4_+_101091875_101091893	1.17475	HNF4A_NR2F1,2.p2	AK134600|Ak4|11639|adenylate kinase 4	NM_001177602|Ak4|11639|adenylate kinase 4
mm9_v1_chr19_+_6164434_6164457	1.17233	HNF4A_NR2F1,2.p2	AK150133|Batf2|74481|basic leucine zipper transcription factor, ATF-like 2	AK171828|Batf2|74481|basic leucine zipper transcription factor, ATF-like 2	BC024521|Batf2|74481|basic leucine zipper transcription factor, ATF-like 2	NM_028967|Batf2|74481|basic leucine zipper transcription factor, ATF-like 2
mm9_v1_chr9_-_55359898_55360033	1.17153	HNF4A_NR2F1,2.p2	BC096645|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	BC003432|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK133525|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK032830|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK168321|Etfa|110842|electron transferring flavoprotein, alpha polypeptide	AK167572|Etfa|110842|electron transferring flavoprotein, alpha polypeptide
mm9_v1_chr6_-_85770936_85770965	1.1701	HNF4A_NR2F1,2.p2	BC024605|Cml5|69049|camello-like 5	BC014696|Cml3|93674|camello-like 3	AK007530|Cml5|69049|camello-like 5	NM_023493|Cml5|69049|camello-like 5
mm9_v1_chr9_-_108363229_108363406	1.16743	HNF4A_NR2F1,2.p2	AK157991|Klhdc8b|78267|kelch domain containing 8B	AK087143|Klhdc8b|78267|kelch domain containing 8B	AK154428|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr3_-_85946515_85946517	1.16723	HNF4A_NR2F1,2.p2	AK135318|Rps3a|20091|ribosomal protein S3A	AK151429|Rps3a|20091|ribosomal protein S3A	AK167512|Rps3a|20091|ribosomal protein S3A
mm9_v1_chr4_-_107704544_107704694	1.16459	HNF4A_NR2F1,2.p2	BC052487|Podn|242608|podocan	AK034987|Podn|242608|podocan	AK161018|Podn|242608|podocan	AY313606|Podn|242608|podocan	NM_172874|Podn|242608|podocan
mm9_v1_chr15_+_25772997_25773018	1.1609	HNF4A_NR2F1,2.p2	NM_001034851|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr16_+_18071099_18071220	1.1603	HNF4A_NR2F1,2.p2	AK187760|Dgcr6|13353|DiGeorge syndrome critical region gene 6	AK219346|Dgcr6|13353|DiGeorge syndrome critical region gene 6	AK219449|Dgcr6|13353|DiGeorge syndrome critical region gene 6
mm9_v1_chr11_+_75327028_75327076	1.15951	HNF4A_NR2F1,2.p2	BC080288|Scarf1|380713|scavenger receptor class F, member 1	NM_001004157|Scarf1|380713|scavenger receptor class F, member 1	AK220215|Scarf1|380713|scavenger receptor class F, member 1	AK133477|Scarf1|380713|scavenger receptor class F, member 1	BC057600|Scarf1|380713|scavenger receptor class F, member 1
mm9_v1_chr17_+_27166203_27166342	1.15731	HNF4A_NR2F1,2.p2	AY141192|Ggnbp1|70772|gametogenetin binding protein 1	NM_027544|Ggnbp1|70772|gametogenetin binding protein 1	AB250379|Ggnbp1|70772|gametogenetin binding protein 1	AK077129|Ggnbp1|70772|gametogenetin binding protein 1	BC049764|Ggnbp1|70772|gametogenetin binding protein 1
mm9_v1_chr10_+_79321979_79322100	1.15671	HNF4A_NR2F1,2.p2	BC008531|Ptbp1|19205|polypyrimidine tract binding protein 1
mm9_v1_chr13_+_24419272_24419288	1.156	HNF4A_NR2F1,2.p2	BC028474|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AB061276|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AB061277|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	NM_001111110|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase
mm9_v1_chr3_-_88182614_88182620	1.15129	HNF4A_NR2F1,2.p2	BC145564|Bglap-rs1|12095|bone gamma-carboxyglutamate protein, related sequence 1	X04142|Bglap2|12097|bone gamma-carboxyglutamate protein 2	NM_001032298|Bglap2|12097|bone gamma-carboxyglutamate protein 2
mm9_v1_chr8_+_123012667_123012765	1.1475	HNF4A_NR2F1,2.p2	BC043094|Gse1|382034|genetic suppressor element 1	NM_198671|Gse1|382034|genetic suppressor element 1
mm9_v1_chr5_+_53658376_53658456	1.14592	HNF4A_NR2F1,2.p2	BC030079|1810013D10Rik|66278|RIKEN cDNA 1810013D10 gene	AK003139|1810013D10Rik|66278|RIKEN cDNA 1810013D10 gene	AK007474|1810013D10Rik|66278|RIKEN cDNA 1810013D10 gene	AK156339|1810013D10Rik|66278|RIKEN cDNA 1810013D10 gene
mm9_v1_chrX_+_33652066_33652189	1.14447	HNF4A_NR2F1,2.p2	AK154675|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK089984|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC052425|Il13ra1|16164|interleukin 13 receptor, alpha 1	NM_133990|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK080147|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK143292|Il13ra1|16164|interleukin 13 receptor, alpha 1	AK082889|Il13ra1|16164|interleukin 13 receptor, alpha 1	BC059939|Il13ra1|16164|interleukin 13 receptor, alpha 1
mm9_v1_chr2_+_22924846_22924986	1.14082	HNF4A_NR2F1,2.p2	AK005001|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC061484|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr14_-_46277772_46277802	1.13836	HNF4A_NR2F1,2.p2	AK155294|Ddhd1|114874|DDHD domain containing 1	AK170271|Ddhd1|114874|DDHD domain containing 1
mm9_v1_chr9_+_54547190_54547334	1.13743	HNF4A_NR2F1,2.p2	AB032401|Dnaja4|58233|DnaJ (Hsp40) homolog, subfamily A, member 4
mm9_v1_chr11_-_100711785_100712037	1.13547	HNF4A_NR2F1,2.p2	Z48539|Stat5b|20851|signal transducer and activator of transcription 5B	BC024319|Stat5b|20851|signal transducer and activator of transcription 5B	AK154664|Stat5b|20851|signal transducer and activator of transcription 5B	AK150098|Stat5b|20851|signal transducer and activator of transcription 5B	NM_001113563|Stat5b|20851|signal transducer and activator of transcription 5B	AK045531|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr14_+_22650727_22650812	1.1339	HNF4A_NR2F1,2.p2	AK150504|Vdac2|22334|voltage-dependent anion channel 2	AK150627|Vdac2|22334|voltage-dependent anion channel 2	AK150940|Vdac2|22334|voltage-dependent anion channel 2	AK078555|Vdac2|22334|voltage-dependent anion channel 2	BC003731|Vdac2|22334|voltage-dependent anion channel 2	NM_011695|Vdac2|22334|voltage-dependent anion channel 2	U30838|Vdac2|22334|voltage-dependent anion channel 2	AK012359|Vdac2|22334|voltage-dependent anion channel 2	AK152274|Vdac2|22334|voltage-dependent anion channel 2	AK168328|Vdac2|22334|voltage-dependent anion channel 2	AK168199|Vdac2|22334|voltage-dependent anion channel 2
mm9_v1_chr19_+_8692485_8692668	1.13346	HNF4A_NR2F1,2.p2	NM_008766|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	BC021647|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	U52842|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6	AK035971|Slc22a6|18399|solute carrier family 22 (organic anion transporter), member 6
mm9_v1_chrX_+_21292025_21292267	1.13226	HNF4A_NR2F1,2.p2	NM_020049|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AF161714|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AF320226|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AK018553|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	BC129908|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	BC129909|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14	AB033285|Slc6a14|56774|solute carrier family 6 (neurotransmitter transporter), member 14
mm9_v1_chr5_-_130488920_130489075	1.13218	HNF4A_NR2F1,2.p2	AK185794|Asl|109900|argininosuccinate lyase	AK186697|Asl|109900|argininosuccinate lyase	AK215777|Asl|109900|argininosuccinate lyase
mm9_v1_chr3_+_122432075_122432112	1.13054	HNF4A_NR2F1,2.p2	AF541937|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	NM_153422|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC119137|Pde5a|242202|phosphodiesterase 5A, cGMP-specific	BC120486|Pde5a|242202|phosphodiesterase 5A, cGMP-specific
mm9_v1_chr1_+_135027742_135027959	1.12965	HNF4A_NR2F1,2.p2	NM_133819|Ppp1r15b|108954|protein phosphatase 1, regulatory (inhibitor) subunit 15b	AK082957|Ppp1r15b|108954|protein phosphatase 1, regulatory (inhibitor) subunit 15b	AK170862|Ppp1r15b|108954|protein phosphatase 1, regulatory (inhibitor) subunit 15b	AK167565|Ppp1r15b|108954|protein phosphatase 1, regulatory (inhibitor) subunit 15b	BC006897|Ppp1r15b|108954|protein phosphatase 1, regulatory (inhibitor) subunit 15b	BC058078|Ppp1r15b|108954|protein phosphatase 1, regulatory (inhibitor) subunit 15b
mm9_v1_chr15_-_78034565_78034624	1.12911	HNF4A_NR2F1,2.p2	X54613|Pvalb|19293|parvalbumin	BC027424|Pvalb|19293|parvalbumin	NM_013645|Pvalb|19293|parvalbumin	AK005371|Pvalb|19293|parvalbumin	AK013561|Pvalb|19293|parvalbumin	AK002354|Pvalb|19293|parvalbumin
mm9_v1_chr1_-_51972718_51972769	1.12847	HNF4A_NR2F1,2.p2	X69987|Myo1b|17912|myosin IB	AK138265|Myo1b|17912|myosin IB	BC026826|Myo1b|17912|myosin IB	AK053754|Myo1b|17912|myosin IB	AK149409|Myo1b|17912|myosin IB	BC046300|Myo1b|17912|myosin IB
mm9_v1_chr4_-_151235861_151235879	1.12683	HNF4A_NR2F1,2.p2	AK158710|Camta1|100072|calmodulin binding transcription activator 1	NM_001081557|Camta1|100072|calmodulin binding transcription activator 1	NM_001195565|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr6_+_86145220_86145449	1.12675	HNF4A_NR2F1,2.p2	AK010785|Tgfa|21802|transforming growth factor alpha	AK165017|Tgfa|21802|transforming growth factor alpha	NM_031199|Tgfa|21802|transforming growth factor alpha	AK166321|Tgfa|21802|transforming growth factor alpha	U65016|Tgfa|21802|transforming growth factor alpha	BC132185|Tgfa|21802|transforming growth factor alpha	BC132211|Tgfa|21802|transforming growth factor alpha
mm9_v1_chr7_+_54102451_54102582	1.12534	HNF4A_NR2F1,2.p2	NM_001136069|Ldha|16828|lactate dehydrogenase A	U13687|Ldha|16828|lactate dehydrogenase A
mm9_v1_chrX_+_146981959_146981987	1.12476	HNF4A_NR2F1,2.p2	NM_001102446|Alas2|11656|aminolevulinic acid synthase 2, erythroid	NM_009653|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK077610|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr2_+_155343767_155343780	1.12332	HNF4A_NR2F1,2.p2	BC051432|Acss2|60525|acyl-CoA synthetase short-chain family member 2	NM_019811|Acss2|60525|acyl-CoA synthetase short-chain family member 2
mm9_v1_chr1_-_24012436_24012480	1.12234	HNF4A_NR2F1,2.p2	AK003789|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	BC028981|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK004301|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK007909|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK015824|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	NM_026503|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene
mm9_v1_chr2_-_92300631_92300701	1.12234	HNF4A_NR2F1,2.p2	AK050311|Slc35c1|228368|solute carrier family 35, member C1	AK045972|Slc35c1|228368|solute carrier family 35, member C1	AK088227|Slc35c1|228368|solute carrier family 35, member C1	AK030977|Slc35c1|228368|solute carrier family 35, member C1	NM_145832|Slc35c1|228368|solute carrier family 35, member C1
mm9_v1_chr9_+_122026424_122026492	1.11883	HNF4A_NR2F1,2.p2	BC094658|Snrk|20623|SNF related kinase	BC020189|Snrk|20623|SNF related kinase
mm9_v1_chr1_-_20608010_20608144	1.11603	HNF4A_NR2F1,2.p2	AY438374|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK143992|Pkhd1|241035|polycystic kidney and hepatic disease 1	AY130764|Pkhd1|241035|polycystic kidney and hepatic disease 1	NM_153179|Pkhd1|241035|polycystic kidney and hepatic disease 1	AK052698|Pkhd1|241035|polycystic kidney and hepatic disease 1
mm9_v1_chr6_-_124764137_124764164	1.1149	HNF4A_NR2F1,2.p2	BC004024|Tpi1|21991|triosephosphate isomerase 1	BC046761|Tpi1|21991|triosephosphate isomerase 1
mm9_v1_chr3_-_104024291_104024328	1.11244	HNF4A_NR2F1,2.p2	AK018328|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3	NM_001159354|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3	NM_133853|Magi3|99470|membrane associated guanylate kinase, WW and PDZ domain containing 3
mm9_v1_chr12_-_8546350_8546371	1.11029	HNF4A_NR2F1,2.p2	AY795939|Slc7a15|328059|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15	NM_001038660|Slc7a15|328059|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15	AK008024|Slc7a15|328059|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
mm9_v1_chr3_-_87862384_87862439	1.10917	HNF4A_NR2F1,2.p2	BC058362|Apoa1bp|246703|apolipoprotein A-I binding protein	AJ344092|Apoa1bp|246703|apolipoprotein A-I binding protein	AY566271|Apoa1bp|246703|apolipoprotein A-I binding protein	NM_144897|Apoa1bp|246703|apolipoprotein A-I binding protein	AK159846|Apoa1bp|246703|apolipoprotein A-I binding protein
mm9_v1_chr5_-_31350934_31350934	1.10648	HNF4A_NR2F1,2.p2	AK158896|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_001177621|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr9_+_107436275_107436351	1.1059	HNF4A_NR2F1,2.p2	AF134238|Tmem115|56395|transmembrane protein 115	NM_019704|Tmem115|56395|transmembrane protein 115	AK043834|Tmem115|56395|transmembrane protein 115	AK154202|Tmem115|56395|transmembrane protein 115
mm9_v1_chr14_+_99697933_99698067	1.10391	HNF4A_NR2F1,2.p2	AB025099|Klf5|12224|Kruppel-like factor 5	AF079852|Klf5|12224|Kruppel-like factor 5	AK087066|Klf5|12224|Kruppel-like factor 5
mm9_v1_chr17_-_46155601_46155620	1.10381	HNF4A_NR2F1,2.p2	AK031905|Vegfa|22339|vascular endothelial growth factor A
mm9_v1_chr17_+_46247928_46248012	1.10325	HNF4A_NR2F1,2.p2	AB049953|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK003444|Mrps18a|68565|mitochondrial ribosomal protein S18A	NM_026768|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK028226|Mrps18a|68565|mitochondrial ribosomal protein S18A	AK172171|Mrps18a|68565|mitochondrial ribosomal protein S18A	BC058959|Mrps18a|68565|mitochondrial ribosomal protein S18A
mm9_v1_chr14_-_37781912_37781927	1.10219	HNF4A_NR2F1,2.p2	AK172153|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr3_-_151873041_151873083	1.0998	HNF4A_NR2F1,2.p2	AK006478|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr6_-_124764170_124764184	1.0948	HNF4A_NR2F1,2.p2	L31793|Tpi1|21991|triosephosphate isomerase 1	AK053780|Tpi1|21991|triosephosphate isomerase 1	AK146013|Tpi1|21991|triosephosphate isomerase 1	AK150735|Tpi1|21991|triosephosphate isomerase 1	AK010808|Tpi1|21991|triosephosphate isomerase 1	AK149768|Tpi1|21991|triosephosphate isomerase 1	AK159741|Tpi1|21991|triosephosphate isomerase 1	AK167437|Tpi1|21991|triosephosphate isomerase 1	AK168446|Tpi1|21991|triosephosphate isomerase 1	X53333|Tpi1|21991|triosephosphate isomerase 1	AK002270|Tpi1|21991|triosephosphate isomerase 1	AK168060|Tpi1|21991|triosephosphate isomerase 1	AK168756|Tpi1|21991|triosephosphate isomerase 1
mm9_v1_chr2_+_10075169_10075197	1.09006	HNF4A_NR2F1,2.p2	AK140756|Itih5|209378|inter-alpha (globulin) inhibitor H5	NM_172471|Itih5|209378|inter-alpha (globulin) inhibitor H5	BC062196|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr13_+_55816170_55816176	1.08707	HNF4A_NR2F1,2.p2	BC094275|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr14_+_14845004_14845173	1.08563	HNF4A_NR2F1,2.p2	AK046679|Atxn7|246103|ataxin 7	NM_139227|Atxn7|246103|ataxin 7	BC137846|Atxn7|246103|ataxin 7
mm9_v1_chr7_+_150293158_150293455	1.08561	HNF4A_NR2F1,2.p2	BC045142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	NM_008434|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AK154244|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	BC055304|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AY331142|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	U70068|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1	AB079603|Kcnq1|16535|potassium voltage-gated channel, subfamily Q, member 1
mm9_v1_chr2_+_10075220_10075229	1.0851	HNF4A_NR2F1,2.p2	BC043314|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr7_-_106494110_106494153	1.08424	HNF4A_NR2F1,2.p2	
mm9_v1_chr18_+_35278553_35278581	1.08405	HNF4A_NR2F1,2.p2	NM_009818|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	X59990|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	AK148496|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	BC060174|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	BC068316|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	D90362|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	BC048163|Ctnna1|12385|catenin (cadherin associated protein), alpha 1
mm9_v1_chr17_+_34742803_34742908	1.08173	HNF4A_NR2F1,2.p2	NM_001163379|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AB005623|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	AK086281|Agpat1|55979|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm9_v1_chr16_-_84835213_84835265	1.07994	HNF4A_NR2F1,2.p2	AK078484|Atp5j|11957|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
mm9_v1_chr10_-_126648509_126648683	1.07839	HNF4A_NR2F1,2.p2	BC021383|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AB054591|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK148299|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	AK140079|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma	NM_054097|Pip4k2c|117150|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
mm9_v1_chr10_+_127526038_127526102	1.07573	HNF4A_NR2F1,2.p2	BC018392|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK183981|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198015|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198554|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK200200|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK205830|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK212143|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK178407|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK182340|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK189215|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK190147|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK191197|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK192149|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198620|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK202885|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK215685|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK216714|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK217489|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK195031|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK196936|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	AK198338|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr17_+_28828286_28828455	1.0744	HNF4A_NR2F1,2.p2	BC012235|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168508|Mapk14|26416|mitogen-activated protein kinase 14	NM_001168514|Mapk14|26416|mitogen-activated protein kinase 14	NM_011951|Mapk14|26416|mitogen-activated protein kinase 14	BC085303|Mapk14|26416|mitogen-activated protein kinase 14	AK089059|Mapk14|26416|mitogen-activated protein kinase 14	AK133684|Mapk14|26416|mitogen-activated protein kinase 14	AF128892|Mapk14|26416|mitogen-activated protein kinase 14	BC018227|Mapk14|26416|mitogen-activated protein kinase 14	U10871|Mapk14|26416|mitogen-activated protein kinase 14	D83073|Mapk14|26416|mitogen-activated protein kinase 14
mm9_v1_chr10_+_88194103_88194147	1.07334	HNF4A_NR2F1,2.p2	AK088330|Arl1|104303|ADP-ribosylation factor-like 1	AK009226|Arl1|104303|ADP-ribosylation factor-like 1	BC116894|Arl1|104303|ADP-ribosylation factor-like 1	BC116896|Arl1|104303|ADP-ribosylation factor-like 1
mm9_v1_chr11_+_69137608_69137618	1.0725	HNF4A_NR2F1,2.p2	BC115818|Trappc1|245828|trafficking protein particle complex 1	BC115921|Trappc1|245828|trafficking protein particle complex 1
mm9_v1_chr2_+_138082301_138082378	1.06739	HNF4A_NR2F1,2.p2	NM_001025431|Btbd3|228662|BTB (POZ) domain containing 3	AK052530|Btbd3|228662|BTB (POZ) domain containing 3	AK161924|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr9_+_111341608_111341622	1.06719	HNF4A_NR2F1,2.p2	AK050312|Dclk3|245038|doublecortin-like kinase 3	DQ286388|Dclk3|245038|doublecortin-like kinase 3
mm9_v1_chr13_-_64349830_64349845	1.06684	HNF4A_NR2F1,2.p2	AK041155|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001122989|Cdc14b|218294|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
mm9_v1_chr8_-_108457731_108457761	1.06607	HNF4A_NR2F1,2.p2	AK220246|Ctrl|109660|chymotrypsin-like	AK007333|Ctrl|109660|chymotrypsin-like	AK009019|Ctrl|109660|chymotrypsin-like	BC087918|Ctrl|109660|chymotrypsin-like	AB016228|Ctrl|109660|chymotrypsin-like	NM_023182|Ctrl|109660|chymotrypsin-like
mm9_v1_chr13_+_3633271_3633328	1.06443	HNF4A_NR2F1,2.p2	AF403041|Asb13|142688|ankyrin repeat and SOCS box-containing 13	NM_178283|Asb13|142688|ankyrin repeat and SOCS box-containing 13	AK078289|Asb13|142688|ankyrin repeat and SOCS box-containing 13	BC018240|Asb13|142688|ankyrin repeat and SOCS box-containing 13	NM_080857|Asb13|142688|ankyrin repeat and SOCS box-containing 13
mm9_v1_chr1_+_57463391_57463391	1.06384	HNF4A_NR2F1,2.p2	AK079116|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene	NM_001081181|9430016H08Rik|68115|RIKEN cDNA 9430016H08 gene
mm9_v1_chr16_+_95924069_95924179	1.06051	HNF4A_NR2F1,2.p2	AK150175|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK014602|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005486|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	J04103|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005504|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK145852|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr11_-_93817153_93817305	1.05851	HNF4A_NR2F1,2.p2	X68193|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	AK169120|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	BC086893|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	AK012447|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	AK150419|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in
mm9_v1_chr3_+_128916849_128916891	1.05789	HNF4A_NR2F1,2.p2	AK034846|Pitx2|18741|paired-like homeodomain transcription factor 2	NM_001042502|Pitx2|18741|paired-like homeodomain transcription factor 2	AF048724|Pitx2|18741|paired-like homeodomain transcription factor 2	AJ243597|Pitx2|18741|paired-like homeodomain transcription factor 2
mm9_v1_chr4_+_71862277_71862381	1.05663	HNF4A_NR2F1,2.p2	AK041409|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK043880|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK053841|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083963|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK039121|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK012513|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK083285|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene	AK042990|C630043F03Rik|68285|RIKEN cDNA C630043F03 gene
mm9_v1_chr19_+_7631935_7632013	1.05661	HNF4A_NR2F1,2.p2	AK163505|Pla2g16|225845|phospholipase A2, group XVI	NM_139269|Pla2g16|225845|phospholipase A2, group XVI	AX775891|Pla2g16|225845|phospholipase A2, group XVI	AK052657|Pla2g16|225845|phospholipase A2, group XVI	AK039703|Pla2g16|225845|phospholipase A2, group XVI	AK042007|Pla2g16|225845|phospholipase A2, group XVI	BC024581|Pla2g16|225845|phospholipase A2, group XVI
mm9_v1_chr17_-_56857074_56857131	1.05018	HNF4A_NR2F1,2.p2	BC039944|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	BC058424|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein	NM_001166474|Vmac|106639|vimentin-type intermediate filament associated coiled-coil protein
mm9_v1_chr5_+_65221116_65221144	1.04937	HNF4A_NR2F1,2.p2	AK036932|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr11_-_60230506_60230604	1.04789	HNF4A_NR2F1,2.p2	BC013607|Atpaf2|246782|ATP synthase mitochondrial F1 complex assembly factor 2	AK078500|Atpaf2|246782|ATP synthase mitochondrial F1 complex assembly factor 2	NM_145427|Atpaf2|246782|ATP synthase mitochondrial F1 complex assembly factor 2
mm9_v1_chr3_-_117571711_117571747	1.04784	HNF4A_NR2F1,2.p2	BC087942|Snx7|76561|sorting nexin 7
mm9_v1_chr2_+_20441139_20441459	1.04726	HNF4A_NR2F1,2.p2	NM_001177630|Etl4|208618|enhancer trap locus 4	NM_001177631|Etl4|208618|enhancer trap locus 4	AK147510|Etl4|208618|enhancer trap locus 4	AB093289|Etl4|208618|enhancer trap locus 4	BC158051|Etl4|208618|enhancer trap locus 4	BC172143|Etl4|208618|enhancer trap locus 4	BC050016|Etl4|208618|enhancer trap locus 4	AK052733|Etl4|208618|enhancer trap locus 4
mm9_v1_chr13_-_92016479_92016493	1.04697	HNF4A_NR2F1,2.p2	BC061221|Ckmt2|76722|creatine kinase, mitochondrial 2	NM_198415|Ckmt2|76722|creatine kinase, mitochondrial 2
mm9_v1_chr7_-_126602780_126602785	1.04647	HNF4A_NR2F1,2.p2	BC119573|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009323|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009843|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	AK009661|Gp2|67133|glycoprotein 2 (zymogen granule membrane)	NM_025989|Gp2|67133|glycoprotein 2 (zymogen granule membrane)
mm9_v1_chr1_+_62749850_62750115	1.04608	HNF4A_NR2F1,2.p2	NM_001077403|Nrp2|18187|neuropilin 2	NM_001077404|Nrp2|18187|neuropilin 2	NM_001077405|Nrp2|18187|neuropilin 2	NM_001077406|Nrp2|18187|neuropilin 2	NM_001077407|Nrp2|18187|neuropilin 2	NM_010939|Nrp2|18187|neuropilin 2	AK149643|Nrp2|18187|neuropilin 2	AK051873|Nrp2|18187|neuropilin 2
mm9_v1_chr3_-_89018256_89018256	1.04608	HNF4A_NR2F1,2.p2	NM_001161824|Mtx1|17827|metaxin 1	NM_013604|Mtx1|17827|metaxin 1
mm9_v1_chr9_+_110379481_110379600	1.04551	HNF4A_NR2F1,2.p2	AK029776|Kif9|16578|kinesin family member 9	AK087008|Kif9|16578|kinesin family member 9	NM_001163569|Kif9|16578|kinesin family member 9	AJ132889|Kif9|16578|kinesin family member 9	BC115765|Kif9|16578|kinesin family member 9	AK029506|Kif9|16578|kinesin family member 9
mm9_v1_chr18_-_38443954_38444055	1.04475	HNF4A_NR2F1,2.p2	BC127076|Pcdh12|53601|protocadherin 12	Y08715|Pcdh12|53601|protocadherin 12	AK048100|Pcdh12|53601|protocadherin 12	NM_017378|Pcdh12|53601|protocadherin 12	AK028374|Pcdh12|53601|protocadherin 12
mm9_v1_chr7_+_135051680_135051735	1.04391	HNF4A_NR2F1,2.p2	AK203967|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr17_-_46841925_46841975	1.04069	HNF4A_NR2F1,2.p2	AK154050|Ppp2r5d|21770|protein phosphatase 2, regulatory subunit B (B56), delta isoform	NM_009358|Ppp2r5d|21770|protein phosphatase 2, regulatory subunit B (B56), delta isoform
mm9_v1_chr11_+_98209978_98210141	1.0376	HNF4A_NR2F1,2.p2	BC026568|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	NM_144828|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B	BC011122|Ppp1r1b|19049|protein phosphatase 1, regulatory (inhibitor) subunit 1B
mm9_v1_chr3_-_117571853_117571885	1.03613	HNF4A_NR2F1,2.p2	AK038971|Snx7|76561|sorting nexin 7	NM_001190156|Snx7|76561|sorting nexin 7	NM_029655|Snx7|76561|sorting nexin 7
mm9_v1_chr16_-_17132372_17132480	1.03612	HNF4A_NR2F1,2.p2	AB043006|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC023290|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC053425|Sdf2l1|64136|stromal cell-derived factor 2-like 1	BC053438|Sdf2l1|64136|stromal cell-derived factor 2-like 1	NM_022324|Sdf2l1|64136|stromal cell-derived factor 2-like 1
mm9_v1_chr2_+_121976718_121976869	1.03587	HNF4A_NR2F1,2.p2	M10416|B2m|12010|beta-2 microglobulin
mm9_v1_chr2_-_110203298_110203336	1.0341	HNF4A_NR2F1,2.p2	AK011548|Fibin|67606|fin bud initiation factor homolog (zebrafish)	AK012026|Fibin|67606|fin bud initiation factor homolog (zebrafish)
mm9_v1_chr13_+_55815945_55816118	1.03356	HNF4A_NR2F1,2.p2	BC062180|Txndc15|69672|thioredoxin domain containing 15	NM_175150|Txndc15|69672|thioredoxin domain containing 15	AK160051|Txndc15|69672|thioredoxin domain containing 15	AK167838|Txndc15|69672|thioredoxin domain containing 15	AK167977|Txndc15|69672|thioredoxin domain containing 15	AK079517|Txndc15|69672|thioredoxin domain containing 15	AK009878|Txndc15|69672|thioredoxin domain containing 15	AK167701|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr1_+_179659944_179659944	1.03247	HNF4A_NR2F1,2.p2	AK006014|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene	NM_027077|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene
mm9_v1_chr13_+_55827167_55827225	1.03078	HNF4A_NR2F1,2.p2	AK209800|Txndc15|69672|thioredoxin domain containing 15	AK213704|Txndc15|69672|thioredoxin domain containing 15	AK206830|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr10_-_4752710_4752812	1.0299	HNF4A_NR2F1,2.p2	AK054222|Myct1|68632|myc target 1	AK030706|Myct1|68632|myc target 1	AK142963|Myct1|68632|myc target 1	BC096559|Myct1|68632|myc target 1	AY090114|Myct1|68632|myc target 1	AK003845|Myct1|68632|myc target 1	NM_026793|Myct1|68632|myc target 1
mm9_v1_chr2_+_30006546_30006566	1.02699	HNF4A_NR2F1,2.p2	AK011204|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr1_+_94807981_94807981	1.02568	HNF4A_NR2F1,2.p2	BC031789|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1	NM_181405|Rnpepl1|108657|arginyl aminopeptidase (aminopeptidase B)-like 1
mm9_v1_chr1_+_75233130_75233146	1.02511	HNF4A_NR2F1,2.p2	AB028858|Dnajb2|56812|DnaJ (Hsp40) homolog, subfamily B, member 2
mm9_v1_chr11_-_93816916_93817051	1.02477	HNF4A_NR2F1,2.p2	EF437324|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	AK151262|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	BC086892|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in	NM_001077529|Nme2|18103|non-metastatic cells 2, protein (NM23B) expressed in
mm9_v1_chr10_+_88194153_88194296	1.02375	HNF4A_NR2F1,2.p2	AK018138|Arl1|104303|ADP-ribosylation factor-like 1	AK010732|Arl1|104303|ADP-ribosylation factor-like 1	NM_025859|Arl1|104303|ADP-ribosylation factor-like 1	AK167748|Arl1|104303|ADP-ribosylation factor-like 1	BC096684|Arl1|104303|ADP-ribosylation factor-like 1
mm9_v1_chr16_-_4523061_4523074	1.01847	HNF4A_NR2F1,2.p2	AK036394|Srl|106393|sarcalumenin	BC145687|Srl|106393|sarcalumenin
mm9_v1_chr9_-_21793876_21793896	1.0181	HNF4A_NR2F1,2.p2	AK134654|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3	AK053550|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3	AK165023|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3	AK165746|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3	AF239661|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3	NM_023622|Rgl3|71746|ral guanine nucleotide dissociation stimulator-like 3
mm9_v1_chr8_+_124900561_124900686	1.01729	HNF4A_NR2F1,2.p2	AK166802|Zc3h18|76014|zinc finger CCCH-type containing 18	AK031413|Zc3h18|76014|zinc finger CCCH-type containing 18	AK159881|Zc3h18|76014|zinc finger CCCH-type containing 18	BC003319|Zc3h18|76014|zinc finger CCCH-type containing 18
mm9_v1_chr6_-_122552269_122552466	1.01724	HNF4A_NR2F1,2.p2	AK146427|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK151799|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK166412|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	AK165209|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC003792|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001134391|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_031159|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U22262|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U22263|Apobec1|11810|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
mm9_v1_chr7_-_31344507_31344672	1.01619	HNF4A_NR2F1,2.p2	AY428767|Lin37|75660|lin-37 homolog (C. elegans)	BC013546|Lin37|75660|lin-37 homolog (C. elegans)	AK007858|Lin37|75660|lin-37 homolog (C. elegans)	NM_029377|Lin37|75660|lin-37 homolog (C. elegans)
mm9_v1_chr3_+_80841086_80841191	1.01615	HNF4A_NR2F1,2.p2	AK052947|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC029099|Pdgfc|54635|platelet-derived growth factor, C polypeptide	AF117608|Pdgfc|54635|platelet-derived growth factor, C polypeptide	BC037696|Pdgfc|54635|platelet-derived growth factor, C polypeptide
mm9_v1_chr5_-_37221812_37221913	1.01265	HNF4A_NR2F1,2.p2	BC066211|Man2b2|17160|mannosidase 2, alpha B2	AK004900|Man2b2|17160|mannosidase 2, alpha B2	AK040388|Man2b2|17160|mannosidase 2, alpha B2	AK151873|Man2b2|17160|mannosidase 2, alpha B2	AK152349|Man2b2|17160|mannosidase 2, alpha B2	AB006458|Man2b2|17160|mannosidase 2, alpha B2	AK079969|Man2b2|17160|mannosidase 2, alpha B2	AK165376|Man2b2|17160|mannosidase 2, alpha B2	NM_008550|Man2b2|17160|mannosidase 2, alpha B2
mm9_v1_chr1_+_161162285_161162568	1.00958	HNF4A_NR2F1,2.p2	BC082804|Rfwd2|26374|ring finger and WD repeat domain 2	NM_011931|Rfwd2|26374|ring finger and WD repeat domain 2	BC051565|Rfwd2|26374|ring finger and WD repeat domain 2	BC158002|Rfwd2|26374|ring finger and WD repeat domain 2	AF151110|Rfwd2|26374|ring finger and WD repeat domain 2
mm9_v1_chr4_+_116924581_116924617	1.00775	HNF4A_NR2F1,2.p2	AK004164|Tmem53|68777|transmembrane protein 53	NM_026837|Tmem53|68777|transmembrane protein 53
mm9_v1_chr2_+_151822240_151822265	1.00591	HNF4A_NR2F1,2.p2	NM_027172|2310046K01Rik|69698|RIKEN cDNA 2310046K01 gene	AK154970|2310046K01Rik|69698|RIKEN cDNA 2310046K01 gene
mm9_v1_chr6_+_122258946_122259119	1.00199	HNF4A_NR2F1,2.p2	AK153302|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK151607|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK149177|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK153474|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK004656|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK145913|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK153140|M6pr|17113|mannose-6-phosphate receptor, cation dependent	AK133943|M6pr|17113|mannose-6-phosphate receptor, cation dependent	X64068|M6pr|17113|mannose-6-phosphate receptor, cation dependent	BC046956|M6pr|17113|mannose-6-phosphate receptor, cation dependent	BC080811|M6pr|17113|mannose-6-phosphate receptor, cation dependent	NM_010749|M6pr|17113|mannose-6-phosphate receptor, cation dependent	BC027210|M6pr|17113|mannose-6-phosphate receptor, cation dependent	X56831|M6pr|17113|mannose-6-phosphate receptor, cation dependent	M63286|M6pr|17113|mannose-6-phosphate receptor, cation dependent
mm9_v1_chr15_+_79501284_79501317	1.00144	HNF4A_NR2F1,2.p2	AK008133|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK009868|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	NM_172609|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150787|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK013471|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK049442|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150360|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK152843|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK167803|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	BC056920|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr2_+_145647868_145648056	0.997927	HNF4A_NR2F1,2.p2	AK152893|Rin2|74030|Ras and Rab interactor 2	AK150680|Rin2|74030|Ras and Rab interactor 2
mm9_v1_chrX_-_93488752_93488780	0.996741	HNF4A_NR2F1,2.p2	BC025105|Vsig4|278180|V-set and immunoglobulin domain containing 4	AK041014|Vsig4|278180|V-set and immunoglobulin domain containing 4	NM_177789|Vsig4|278180|V-set and immunoglobulin domain containing 4
mm9_v1_chr3_-_116671720_116671775	0.996167	HNF4A_NR2F1,2.p2	AK136939|Palmd|114301|palmdelphin
mm9_v1_chr2_-_134380065_134380100	0.993922	HNF4A_NR2F1,2.p2	BC018587|Hao1|15112|hydroxyacid oxidase 1, liver	AF104312|Hao1|15112|hydroxyacid oxidase 1, liver	BC119535|Hao1|15112|hydroxyacid oxidase 1, liver	BC119536|Hao1|15112|hydroxyacid oxidase 1, liver	NM_010403|Hao1|15112|hydroxyacid oxidase 1, liver	AK149565|Hao1|15112|hydroxyacid oxidase 1, liver
mm9_v1_chr2_+_169458802_169458807	0.992563	HNF4A_NR2F1,2.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr5_-_149771253_149771279	0.992136	HNF4A_NR2F1,2.p2	AK144510|1810059H22Rik|69820|RIKEN cDNA 1810059H22 gene	AK007907|1810059H22Rik|69820|RIKEN cDNA 1810059H22 gene
mm9_v1_chr10_+_127759640_127759648	0.991556	HNF4A_NR2F1,2.p2	AK013014|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK019927|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr11_-_20729367_20729429	0.990108	HNF4A_NR2F1,2.p2	AK081513|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr8_-_97220127_97220176	0.98996	HNF4A_NR2F1,2.p2	AK018198|Pllp|67801|plasma membrane proteolipid	AK032540|Pllp|67801|plasma membrane proteolipid	BC024534|Pllp|67801|plasma membrane proteolipid	AK002477|Pllp|67801|plasma membrane proteolipid	NM_026385|Pllp|67801|plasma membrane proteolipid
mm9_v1_chr9_+_37209586_37209656	0.989591	HNF4A_NR2F1,2.p2	BC071193|Robo4|74144|roundabout homolog 4 (Drosophila)	AF536772|Robo4|74144|roundabout homolog 4 (Drosophila)	AK004723|Robo4|74144|roundabout homolog 4 (Drosophila)	NM_028783|Robo4|74144|roundabout homolog 4 (Drosophila)	AK087355|Robo4|74144|roundabout homolog 4 (Drosophila)
mm9_v1_chr14_+_55087412_55087483	0.986513	HNF4A_NR2F1,2.p2	BC011058|Lrp10|65107|low-density lipoprotein receptor-related protein 10
mm9_v1_chr3_+_14578783_14578804	0.985254	HNF4A_NR2F1,2.p2	X86925|E2f5|13559|E2F transcription factor 5
mm9_v1_chr17_+_31701700_31701809	0.985058	HNF4A_NR2F1,2.p2	NM_016670|Pknox1|18771|Pbx/knotted 1 homeobox	AF061270|Pknox1|18771|Pbx/knotted 1 homeobox	AK134000|Pknox1|18771|Pbx/knotted 1 homeobox
mm9_v1_chr6_+_125502979_125502996	0.983857	HNF4A_NR2F1,2.p2	AK044921|Vwf|22371|Von Willebrand factor homolog	AK083237|Vwf|22371|Von Willebrand factor homolog	AK164450|Vwf|22371|Von Willebrand factor homolog	DQ355287|Vwf|22371|Von Willebrand factor homolog	DQ355288|Vwf|22371|Von Willebrand factor homolog	NM_011708|Vwf|22371|Von Willebrand factor homolog
mm9_v1_chr3_-_40886908_40886954	0.983127	HNF4A_NR2F1,2.p2	BC044759|Pgrmc2|70804|progesterone receptor membrane component 2	AX775753|Pgrmc2|70804|progesterone receptor membrane component 2	AK140064|Pgrmc2|70804|progesterone receptor membrane component 2
mm9_v1_chr9_+_110666178_110666184	0.982692	HNF4A_NR2F1,2.p2	AK146943|Myl3|17897|myosin, light polypeptide 3	BC061222|Myl3|17897|myosin, light polypeptide 3	AK002312|Myl3|17897|myosin, light polypeptide 3	NM_010859|Myl3|17897|myosin, light polypeptide 3
mm9_v1_chr8_+_122516369_122516408	0.980652	HNF4A_NR2F1,2.p2	AK154308|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	NM_030209|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	BC090642|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK033858|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2
mm9_v1_chr3_+_104591955_104591985	0.979226	HNF4A_NR2F1,2.p2	AK160650|Rhoc|11853|ras homolog gene family, member C	X80638|Rhoc|11853|ras homolog gene family, member C	BC004627|Rhoc|11853|ras homolog gene family, member C
mm9_v1_chr17_+_25032885_25032933	0.977828	HNF4A_NR2F1,2.p2	AK181947|Mrps34|79044|mitochondrial ribosomal protein S34
mm9_v1_chr4_+_114761312_114761366	0.977191	HNF4A_NR2F1,2.p2	NM_001164557|Pdzk1ip1|67182|PDZK1 interacting protein 1	NM_001164558|Pdzk1ip1|67182|PDZK1 interacting protein 1	NM_026018|Pdzk1ip1|67182|PDZK1 interacting protein 1	AK007936|Pdzk1ip1|67182|PDZK1 interacting protein 1	AK008253|Pdzk1ip1|67182|PDZK1 interacting protein 1	AK012305|Pdzk1ip1|67182|PDZK1 interacting protein 1
mm9_v1_chr7_+_80885223_80885308	0.975739	HNF4A_NR2F1,2.p2	BC034069|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr2_-_92299870_92299954	0.975427	HNF4A_NR2F1,2.p2	AK144762|Slc35c1|228368|solute carrier family 35, member C1	AK138595|Slc35c1|228368|solute carrier family 35, member C1	AK151154|Slc35c1|228368|solute carrier family 35, member C1	NM_211358|Slc35c1|228368|solute carrier family 35, member C1
mm9_v1_chr2_+_157854434_157854436	0.975402	HNF4A_NR2F1,2.p2	AK152125|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	AK152220|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B
mm9_v1_chr4_-_59973470_59973536	0.975228	HNF4A_NR2F1,2.p2	EU882229|Mup4|17843|major urinary protein 4	BC012227|Mup4|17843|major urinary protein 4	M16358|Mup4|17843|major urinary protein 4	NM_008648|Mup4|17843|major urinary protein 4
mm9_v1_chr4_+_42668782_42668814	0.972206	HNF4A_NR2F1,2.p2	AK005520|Gm13306|100039863|predicted gene 13306	NM_001164046|Gm13306|100039863|predicted gene 13306	BC028511|Gm13306|100039863|predicted gene 13306
mm9_v1_chr11_-_101285982_101286065	0.971438	HNF4A_NR2F1,2.p2	BC141198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr5_+_67652034_67652135	0.969402	HNF4A_NR2F1,2.p2	BC016570|Tmem33|67878|transmembrane protein 33	BC023966|Tmem33|67878|transmembrane protein 33	AK019127|Tmem33|67878|transmembrane protein 33
mm9_v1_chr8_+_87356149_87356307	0.965225	HNF4A_NR2F1,2.p2	AK002738|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK003314|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK019570|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK028227|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC061069|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	NM_183358|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	AK009723|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1	BC022592|Gadd45gip1|102060|growth arrest and DNA-damage-inducible, gamma interacting protein 1
mm9_v1_chr13_+_74258962_74258962	0.963091	HNF4A_NR2F1,2.p2	NM_001081060|Slc9a3|105243|solute carrier family 9 (sodium/hydrogen exchanger), member 3
mm9_v1_chr9_-_56994725_56994840	0.962443	HNF4A_NR2F1,2.p2	AB079069|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	NM_028347|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)
mm9_v1_chr3_+_27883092_27883235	0.957312	HNF4A_NR2F1,2.p2	NM_008875|Pld1|18805|phospholipase D1	BC068144|Pld1|18805|phospholipase D1
mm9_v1_chr7_-_139767997_139768034	0.956223	HNF4A_NR2F1,2.p2	BC008119|Oat|18242|ornithine aminotransferase	AK146413|Oat|18242|ornithine aminotransferase	AK168851|Oat|18242|ornithine aminotransferase
mm9_v1_chr8_+_111238543_111238543	0.953529	HNF4A_NR2F1,2.p2	D26046|Zfhx3|11906|zinc finger homeobox 3	NM_007496|Zfhx3|11906|zinc finger homeobox 3
mm9_v1_chr16_-_37654443_37654469	0.952508	HNF4A_NR2F1,2.p2	BC096421|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	AK004958|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	AK009807|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	AK018707|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	NM_026610|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	BC056229|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr3_+_14578670_14578689	0.95184	HNF4A_NR2F1,2.p2	BC003220|E2f5|13559|E2F transcription factor 5	NM_007892|E2f5|13559|E2F transcription factor 5
mm9_v1_chr2_-_91771882_91771894	0.947744	HNF4A_NR2F1,2.p2	M34327|Mdk|17242|midkine	M35833|Mdk|17242|midkine
mm9_v1_chr9_+_110379461_110379473	0.946991	HNF4A_NR2F1,2.p2	NM_010628|Kif9|16578|kinesin family member 9
mm9_v1_chr3_-_85946518_85946522	0.94589	HNF4A_NR2F1,2.p2	AK146304|Rps3a|20091|ribosomal protein S3A
mm9_v1_chrX_-_35988279_35988319	0.945749	HNF4A_NR2F1,2.p2	BC029909|C1galt1c1|59048|C1GALT1-specific chaperone 1	NM_021550|C1galt1c1|59048|C1GALT1-specific chaperone 1
mm9_v1_chr7_+_28232980_28232996	0.945569	HNF4A_NR2F1,2.p2	BC027279|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	NM_144923|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chr13_+_45602909_45602912	0.945536	HNF4A_NR2F1,2.p2	AK084508|Gmpr|66355|guanosine monophosphate reductase
mm9_v1_chr15_-_83002624_83002644	0.939962	HNF4A_NR2F1,2.p2	AK128917|Cyb5r3|109754|cytochrome b5 reductase 3	BC043074|Cyb5r3|109754|cytochrome b5 reductase 3	NM_029787|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr2_+_157854427_157854433	0.938812	HNF4A_NR2F1,2.p2	AK045404|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B
mm9_v1_chr2_-_157854168_157854171	0.938296	HNF4A_NR2F1,2.p2	AK128940|Tti1|75425|Tel2 interacting protein 1 homolog (S. pombe)
mm9_v1_chr10_-_82085891_82085972	0.937287	HNF4A_NR2F1,2.p2	NM_001135567|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	NM_001135568|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	NM_001135569|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene
mm9_v1_chr5_+_96385940_96385969	0.937269	HNF4A_NR2F1,2.p2	AK160241|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	AK156025|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	AF044196|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	NM_018866|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	AF030636|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	BC012965|Cxcl13|55985|chemokine (C-X-C motif) ligand 13
mm9_v1_chr4_+_116230293_116230350	0.935561	HNF4A_NR2F1,2.p2	AK037224|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK133761|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	AK019942|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	BC066034|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1	NM_029868|Gpbp1l1|77110|GC-rich promoter binding protein 1-like 1
mm9_v1_chr10_-_79373177_79373432	0.930152	HNF4A_NR2F1,2.p2	AK206142|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK206739|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK212119|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK180841|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK179327|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK207391|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK218659|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene	AK218931|C030046I01Rik|109284|RIKEN cDNA C030046I01 gene
mm9_v1_chr8_-_126418628_126418659	0.92999	HNF4A_NR2F1,2.p2	M12866|Acta1|11459|actin, alpha 1, skeletal muscle	BC014877|Acta1|11459|actin, alpha 1, skeletal muscle	NM_009606|Acta1|11459|actin, alpha 1, skeletal muscle	AK027919|Acta1|11459|actin, alpha 1, skeletal muscle
mm9_v1_chr9_-_21921573_21921635	0.929457	HNF4A_NR2F1,2.p2	BC019870|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	BC024488|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK014116|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK089052|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK002505|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK003614|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)
mm9_v1_chr7_+_135052004_135052051	0.927169	HNF4A_NR2F1,2.p2	
mm9_v1_chr4_+_137024656_137024742	0.925655	HNF4A_NR2F1,2.p2	AK147294|Hspg2|15530|perlecan (heparan sulfate proteoglycan 2)	AK147396|Hspg2|15530|perlecan (heparan sulfate proteoglycan 2)	NM_008305|Hspg2|15530|perlecan (heparan sulfate proteoglycan 2)
mm9_v1_chr4_-_151235758_151235857	0.925218	HNF4A_NR2F1,2.p2	AK076589|Camta1|100072|calmodulin binding transcription activator 1	BC150740|Camta1|100072|calmodulin binding transcription activator 1	AK034038|Camta1|100072|calmodulin binding transcription activator 1	AK144150|Camta1|100072|calmodulin binding transcription activator 1	AK009988|Camta1|100072|calmodulin binding transcription activator 1
mm9_v1_chr10_-_13588578_13588812	0.923711	HNF4A_NR2F1,2.p2	AK008210|Aig1|66253|androgen-induced 1	NM_025446|Aig1|66253|androgen-induced 1	AK162306|Aig1|66253|androgen-induced 1	AK005332|Aig1|66253|androgen-induced 1	AK084050|Aig1|66253|androgen-induced 1	BC035305|Aig1|66253|androgen-induced 1
mm9_v1_chr6_-_72312366_72312409	0.921552	HNF4A_NR2F1,2.p2	BC005559|Rnf181|66510|ring finger protein 181	BC083119|Rnf181|66510|ring finger protein 181	NM_025607|Rnf181|66510|ring finger protein 181	AK168670|Rnf181|66510|ring finger protein 181	AK010854|Rnf181|66510|ring finger protein 181	AK014094|Rnf181|66510|ring finger protein 181	AK159788|Rnf181|66510|ring finger protein 181	AK166904|Rnf181|66510|ring finger protein 181	AK166995|Rnf181|66510|ring finger protein 181	AK167396|Rnf181|66510|ring finger protein 181	AK167633|Rnf181|66510|ring finger protein 181	AK167935|Rnf181|66510|ring finger protein 181
mm9_v1_chr4_-_106136704_106136777	0.918568	HNF4A_NR2F1,2.p2	AK149520|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9	AK043077|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9
mm9_v1_chr16_-_4790212_4790249	0.915992	HNF4A_NR2F1,2.p2	AK166141|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene
mm9_v1_chr2_-_168567244_168567299	0.915605	HNF4A_NR2F1,2.p2	BC094551|Atp9a|11981|ATPase, class II, type 9A	BC021814|Atp9a|11981|ATPase, class II, type 9A	NM_015731|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chr5_+_130698192_130698294	0.915599	HNF4A_NR2F1,2.p2	AK142176|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171152|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK002297|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	AK171607|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene	BC033455|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene
mm9_v1_chr17_-_36408313_36408377	0.910839	HNF4A_NR2F1,2.p2	AK220298|Trim39|79263|tripartite motif-containing 39	AK145861|Trim39|79263|tripartite motif-containing 39	AK053507|Trim39|79263|tripartite motif-containing 39	NM_178281|Trim39|79263|tripartite motif-containing 39
mm9_v1_chr14_-_21299037_21299092	0.908458	HNF4A_NR2F1,2.p2	L13129|Anxa7|11750|annexin A7
mm9_v1_chr1_-_75176965_75176984	0.906003	HNF4A_NR2F1,2.p2	AK151165|Abcb6|74104|ATP-binding cassette, sub-family B (MDR/TAP), member 6
mm9_v1_chr7_-_139768035_139768106	0.905033	HNF4A_NR2F1,2.p2	AK128914|Oat|18242|ornithine aminotransferase	AK145877|Oat|18242|ornithine aminotransferase	NM_016978|Oat|18242|ornithine aminotransferase
mm9_v1_chr13_+_33753273_33753343	0.901745	HNF4A_NR2F1,2.p2	AK136270|Serpinb6d|238568|serine (or cysteine) peptidase inhibitor, clade B, member 6d	NM_001076790|Serpinb6d|238568|serine (or cysteine) peptidase inhibitor, clade B, member 6d	BC147559|Serpinb6d|238568|serine (or cysteine) peptidase inhibitor, clade B, member 6d
mm9_v1_chr2_+_157854192_157854307	0.899815	HNF4A_NR2F1,2.p2	AK011979|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	DQ372939|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	AK035806|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	AK147718|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	AK147930|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B
mm9_v1_chr3_+_69026340_69026379	0.89949	HNF4A_NR2F1,2.p2	AK018621|Arl14|71619|ADP-ribosylation factor-like 14	NM_027843|Arl14|71619|ADP-ribosylation factor-like 14	BC104368|Arl14|71619|ADP-ribosylation factor-like 14	BC104369|Arl14|71619|ADP-ribosylation factor-like 14
mm9_v1_chr1_+_174056868_174056950	0.899424	HNF4A_NR2F1,2.p2	AK029368|Pex19|19298|peroxisomal biogenesis factor 19	NM_001159525|Pex19|19298|peroxisomal biogenesis factor 19	NM_023041|Pex19|19298|peroxisomal biogenesis factor 19	AK028449|Pex19|19298|peroxisomal biogenesis factor 19	AK075576|Pex19|19298|peroxisomal biogenesis factor 19	AK170175|Pex19|19298|peroxisomal biogenesis factor 19	AK012785|Pex19|19298|peroxisomal biogenesis factor 19	BC019767|Pex19|19298|peroxisomal biogenesis factor 19	Y09046|Pex19|19298|peroxisomal biogenesis factor 19	CT010305|Pex19|19298|peroxisomal biogenesis factor 19	BC012517|Pex19|19298|peroxisomal biogenesis factor 19
mm9_v1_chr7_+_114711195_114711198	0.897855	HNF4A_NR2F1,2.p2	AK140277|Olfml1|244198|olfactomedin-like 1
mm9_v1_chr4_+_42248495_42248522	0.897718	HNF4A_NR2F1,2.p2	AK144337|Ccl19|24047|chemokine (C-C motif) ligand 19	AF059208|Ccl19|24047|chemokine (C-C motif) ligand 19	NM_011888|Ccl19|24047|chemokine (C-C motif) ligand 19	BC051472|Ccl19|24047|chemokine (C-C motif) ligand 19
mm9_v1_chr11_+_97524725_97524725	0.897666	HNF4A_NR2F1,2.p2	NM_139311|Mllt6|246198|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm9_v1_chr3_-_40650624_40650795	0.896823	HNF4A_NR2F1,2.p2	BC010483|Mfsd8|72175|major facilitator superfamily domain containing 8	AK013144|Mfsd8|72175|major facilitator superfamily domain containing 8	BC113183|Mfsd8|72175|major facilitator superfamily domain containing 8	BC113790|Mfsd8|72175|major facilitator superfamily domain containing 8	AK035291|Mfsd8|72175|major facilitator superfamily domain containing 8	AK077957|Mfsd8|72175|major facilitator superfamily domain containing 8	NM_028140|Mfsd8|72175|major facilitator superfamily domain containing 8	AK032080|Mfsd8|72175|major facilitator superfamily domain containing 8
mm9_v1_chr19_-_5688877_5688907	0.894277	HNF4A_NR2F1,2.p2	BC055289|Pcnxl3|104401|pecanex-like 3 (Drosophila)	BC096538|Pcnxl3|104401|pecanex-like 3 (Drosophila)	NM_144868|Pcnxl3|104401|pecanex-like 3 (Drosophila)
mm9_v1_chr11_+_3883638_3883715	0.893959	HNF4A_NR2F1,2.p2	AK007645|Gal3st1|53897|galactose-3-O-sulfotransferase 1	NM_001177703|Gal3st1|53897|galactose-3-O-sulfotransferase 1	NM_016922|Gal3st1|53897|galactose-3-O-sulfotransferase 1	BC026806|Gal3st1|53897|galactose-3-O-sulfotransferase 1
mm9_v1_chr11_+_57917712_57917754	0.89392	HNF4A_NR2F1,2.p2	AK007581|Cnot8|69125|CCR4-NOT transcription complex, subunit 8
mm9_v1_chr10_-_116387419_116387512	0.892204	HNF4A_NR2F1,2.p2	BC080289|Rab3ip|216363|RAB3A interacting protein	NM_001003950|Rab3ip|216363|RAB3A interacting protein	AK152122|Rab3ip|216363|RAB3A interacting protein
mm9_v1_chr17_+_30272123_30272409	0.891177	HNF4A_NR2F1,2.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr10_+_59754384_59754499	0.890292	HNF4A_NR2F1,2.p2	AK159622|Psap|19156|prosaposin	AK210181|Psap|19156|prosaposin	BC036266|Psap|19156|prosaposin	AK180106|Psap|19156|prosaposin	AK194829|Psap|19156|prosaposin	AK197804|Psap|19156|prosaposin	AK201095|Psap|19156|prosaposin	AK203509|Psap|19156|prosaposin
mm9_v1_chr2_+_180921963_180922240	0.888415	HNF4A_NR2F1,2.p2	AK002602|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC058516|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK154758|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK166314|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC100439|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK003282|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	NM_025598|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012327|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012037|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK014211|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC029225|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	BC091753|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	AK012545|Ppdpf|66496|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene
mm9_v1_chr7_-_134028184_134028216	0.888212	HNF4A_NR2F1,2.p2	BC085152|Taok2|381921|TAO kinase 2	AK031190|Taok2|381921|TAO kinase 2
mm9_v1_chr5_-_130731280_130731426	0.887118	HNF4A_NR2F1,2.p2	AK005079|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK019228|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK168847|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	BC003849|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	NM_023248|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	AK014648|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)	X99668|Sbds|66711|Shwachman-Bodian-Diamond syndrome homolog (human)
mm9_v1_chr8_+_4238718_4238771	0.885019	HNF4A_NR2F1,2.p2	NM_001042557|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_001164172|Map2k7|26400|mitogen-activated protein kinase kinase 7	NM_011944|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022112|Map2k7|26400|mitogen-activated protein kinase kinase 7	AF022113|Map2k7|26400|mitogen-activated protein kinase kinase 7
mm9_v1_chr4_+_131830270_131830384	0.883978	HNF4A_NR2F1,2.p2	AK132927|Taf12|66464|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_025579|Taf12|66464|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK007811|Taf12|66464|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK013133|Taf12|66464|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC019668|Taf12|66464|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK139748|Taf12|66464|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr6_-_24477565_24477581	0.882397	HNF4A_NR2F1,2.p2	AK009642|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019245|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019368|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019430|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009338|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009840|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009985|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010092|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019364|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019359|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009775|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr7_+_19609725_19609766	0.879388	HNF4A_NR2F1,2.p2	AK155093|Sympk|68188|symplekin	NM_026605|Sympk|68188|symplekin	AK146894|Sympk|68188|symplekin	AK168541|Sympk|68188|symplekin	AK168757|Sympk|68188|symplekin	AK165591|Sympk|68188|symplekin
mm9_v1_chr3_+_107698740_107698844	0.877629	HNF4A_NR2F1,2.p2	AK028098|Gstm5|14866|glutathione S-transferase, mu 5	NM_010360|Gstm5|14866|glutathione S-transferase, mu 5	U24428|Gstm5|14866|glutathione S-transferase, mu 5	BC008206|Gstm5|14866|glutathione S-transferase, mu 5	AK019317|Gstm5|14866|glutathione S-transferase, mu 5	AK002750|Gstm5|14866|glutathione S-transferase, mu 5
mm9_v1_chr16_+_95923988_95924060	0.872534	HNF4A_NR2F1,2.p2	NM_011809|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK038348|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr2_+_32612744_32612905	0.869934	HNF4A_NR2F1,2.p2	BC003466|Tor2a|30933|torsin family 2, member A	BC024469|Tor2a|30933|torsin family 2, member A	NM_152800|Tor2a|30933|torsin family 2, member A	AK170979|Tor2a|30933|torsin family 2, member A	AK171247|Tor2a|30933|torsin family 2, member A	AK162719|Tor2a|30933|torsin family 2, member A	AK019246|Tor2a|30933|torsin family 2, member A	AK185253|Tor2a|30933|torsin family 2, member A	AK189495|Tor2a|30933|torsin family 2, member A
mm9_v1_chr11_+_114712845_114712854	0.869001	HNF4A_NR2F1,2.p2	NM_001110337|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C	NM_001110338|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C	AY079516|Gprc5c|70355|G protein-coupled receptor, family C, group 5, member C
mm9_v1_chr13_-_104710374_104710739	0.868975	HNF4A_NR2F1,2.p2	BC141178|Erbb2ip|59079|Erbb2 interacting protein	BC141188|Erbb2ip|59079|Erbb2 interacting protein	BC145498|Erbb2ip|59079|Erbb2 interacting protein	BC145509|Erbb2ip|59079|Erbb2 interacting protein	AK169529|Erbb2ip|59079|Erbb2 interacting protein	NM_001005868|Erbb2ip|59079|Erbb2 interacting protein	NM_021563|Erbb2ip|59079|Erbb2 interacting protein
mm9_v1_chr7_-_89796961_89797037	0.868848	HNF4A_NR2F1,2.p2	AK007285|Fam154b|330577|family with sequence similarity 154, member B	AK007315|Fam154b|330577|family with sequence similarity 154, member B	AK051095|Fam154b|330577|family with sequence similarity 154, member B	AK038727|Fam154b|330577|family with sequence similarity 154, member B	NM_177894|Fam154b|330577|family with sequence similarity 154, member B
mm9_v1_chr10_-_22539951_22539979	0.868481	HNF4A_NR2F1,2.p2	AK161795|Tcf21|21412|transcription factor 21	AK135423|Tcf21|21412|transcription factor 21
mm9_v1_chr15_-_79845237_79845237	0.866936	HNF4A_NR2F1,2.p2	BC053430|Pdgfb|18591|platelet derived growth factor, B polypeptide	NM_011057|Pdgfb|18591|platelet derived growth factor, B polypeptide
mm9_v1_chr14_-_67627598_67627723	0.860699	HNF4A_NR2F1,2.p2	AK220143|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC049081|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK139950|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK004667|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC085237|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK018668|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK155040|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AY057069|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK013467|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK007920|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AF067395|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK168482|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK169391|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	NM_009761|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like
mm9_v1_chr11_-_115940157_115940300	0.85751	HNF4A_NR2F1,2.p2	
mm9_v1_chr17_-_45724536_45724608	0.85425	HNF4A_NR2F1,2.p2	AK198320|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1	AK212529|Slc29a1|63959|solute carrier family 29 (nucleoside transporters), member 1
mm9_v1_chrX_-_35988178_35988234	0.853111	HNF4A_NR2F1,2.p2	AB030184|C1galt1c1|59048|C1GALT1-specific chaperone 1	AY159320|C1galt1c1|59048|C1GALT1-specific chaperone 1
mm9_v1_chr7_-_112936063_112936159	0.852045	HNF4A_NR2F1,2.p2	NM_001162943|Dchs1|233651|dachsous 1 (Drosophila)	AK048080|Dchs1|233651|dachsous 1 (Drosophila)
mm9_v1_chr17_+_45704145_45704512	0.851334	HNF4A_NR2F1,2.p2	AK211181|Slc35b2|73836|solute carrier family 35, member B2	AK212100|Slc35b2|73836|solute carrier family 35, member B2	AK207266|Slc35b2|73836|solute carrier family 35, member B2	AK212091|Slc35b2|73836|solute carrier family 35, member B2	AK214463|Slc35b2|73836|solute carrier family 35, member B2
mm9_v1_chr4_+_62021728_62021759	0.850285	HNF4A_NR2F1,2.p2	NM_175090|Slc31a1|20529|solute carrier family 31, member 1	AK151337|Slc31a1|20529|solute carrier family 31, member 1
mm9_v1_chr6_-_38826156_38826247	0.84785	HNF4A_NR2F1,2.p2	NM_010433|Hipk2|15258|homeodomain interacting protein kinase 2
mm9_v1_chr11_+_100720664_100720716	0.847724	HNF4A_NR2F1,2.p2	NM_011488|Stat5a|20850|signal transducer and activator of transcription 5A	BC013274|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr13_-_74460431_74460546	0.847277	HNF4A_NR2F1,2.p2	
mm9_v1_chr4_-_147818818_147818893	0.84636	HNF4A_NR2F1,2.p2	BC071203|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK004550|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK078442|Ubiad1|71707|UbiA prenyltransferase domain containing 1	NM_027873|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK034787|Ubiad1|71707|UbiA prenyltransferase domain containing 1
mm9_v1_chr8_+_119873069_119873069	0.846321	HNF4A_NR2F1,2.p2	AK016712|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene	NM_028941|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr4_+_155205723_155205804	0.845726	HNF4A_NR2F1,2.p2	AK003442|Aurkaip1|66077|aurora kinase A interacting protein 1	NM_025338|Aurkaip1|66077|aurora kinase A interacting protein 1	AK002737|Aurkaip1|66077|aurora kinase A interacting protein 1	AK158165|Aurkaip1|66077|aurora kinase A interacting protein 1	AK033452|Aurkaip1|66077|aurora kinase A interacting protein 1	AK166049|Aurkaip1|66077|aurora kinase A interacting protein 1	BC011245|Aurkaip1|66077|aurora kinase A interacting protein 1	AK144719|Aurkaip1|66077|aurora kinase A interacting protein 1
mm9_v1_chr9_-_50560397_50560458	0.84468	HNF4A_NR2F1,2.p2	BC064051|Hspb2|69253|heat shock protein 2	AK012780|Hspb2|69253|heat shock protein 2	NM_001164708|Hspb2|69253|heat shock protein 2	NM_024441|Hspb2|69253|heat shock protein 2
mm9_v1_chr10_+_79516781_79516793	0.842963	HNF4A_NR2F1,2.p2	AB072797|Gpx4|625249|glutathione peroxidase 4	NM_001037741|Gpx4|625249|glutathione peroxidase 4	AF274027|Gpx4|625249|glutathione peroxidase 4
mm9_v1_chr5_-_65826969_65827179	0.842273	HNF4A_NR2F1,2.p2	AK167560|Ugdh|22235|UDP-glucose dehydrogenase	BC006749|Ugdh|22235|UDP-glucose dehydrogenase	NM_009466|Ugdh|22235|UDP-glucose dehydrogenase	AK169208|Ugdh|22235|UDP-glucose dehydrogenase	AK144673|Ugdh|22235|UDP-glucose dehydrogenase
mm9_v1_chr5_+_31167731_31167889	0.841155	HNF4A_NR2F1,2.p2	AK210919|Mapre3|100732|microtubule-associated protein, RP/EB family, member 3
mm9_v1_chr12_+_86474651_86474814	0.841082	HNF4A_NR2F1,2.p2	AK218097|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK201762|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK202210|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK205589|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK206354|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK207941|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK209363|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK210896|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK219425|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK186759|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
mm9_v1_chr13_-_14705281_14705338	0.839622	HNF4A_NR2F1,2.p2	AF279255|Mrpl32|75398|mitochondrial ribosomal protein L32	AK078324|Mrpl32|75398|mitochondrial ribosomal protein L32	AK031791|Mrpl32|75398|mitochondrial ribosomal protein L32	AK002753|Mrpl32|75398|mitochondrial ribosomal protein L32	NM_029271|Mrpl32|75398|mitochondrial ribosomal protein L32	AB049650|Mrpl32|75398|mitochondrial ribosomal protein L32	BC052214|Mrpl32|75398|mitochondrial ribosomal protein L32
mm9_v1_chr4_+_43460181_43460289	0.839266	HNF4A_NR2F1,2.p2	
mm9_v1_chr16_+_8637799_8637865	0.83881	HNF4A_NR2F1,2.p2	AF043514|Pmm2|54128|phosphomannomutase 2	NM_016881|Pmm2|54128|phosphomannomutase 2	AK012683|Pmm2|54128|phosphomannomutase 2	AK005074|Pmm2|54128|phosphomannomutase 2	AK002858|Pmm2|54128|phosphomannomutase 2	AK162626|Pmm2|54128|phosphomannomutase 2	BC037101|Pmm2|54128|phosphomannomutase 2	BC094448|Pmm2|54128|phosphomannomutase 2	AK149116|Pmm2|54128|phosphomannomutase 2	AK003334|Pmm2|54128|phosphomannomutase 2	AK134850|Pmm2|54128|phosphomannomutase 2	AK145402|Pmm2|54128|phosphomannomutase 2	BC046325|Pmm2|54128|phosphomannomutase 2
mm9_v1_chr10_-_127846807_127846878	0.838213	HNF4A_NR2F1,2.p2	BC026942|Obfc2b|69917|oligonucleotide/oligosaccharide-binding fold containing 2B	DQ158906|Obfc2b|69917|oligonucleotide/oligosaccharide-binding fold containing 2B	NM_027257|Obfc2b|69917|oligonucleotide/oligosaccharide-binding fold containing 2B
mm9_v1_chr3_+_88128944_88129011	0.83653	HNF4A_NR2F1,2.p2	AB027142|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	NM_020003|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK075614|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK150794|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK154340|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK007803|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK171042|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK171142|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK181848|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK189139|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK002728|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK080538|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK170696|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK172606|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	BC021547|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AB027141|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK160793|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene
mm9_v1_chr12_-_88225714_88225776	0.834817	HNF4A_NR2F1,2.p2	AK155373|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK171043|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK160059|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK140441|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK082791|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AF525300|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK084782|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK173282|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	NM_145836|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK032622|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	AK032366|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene
mm9_v1_chr16_+_35938555_35938555	0.834091	HNF4A_NR2F1,2.p2	BC070466|Parp9|80285|poly (ADP-ribose) polymerase family, member 9	NM_030253|Parp9|80285|poly (ADP-ribose) polymerase family, member 9
mm9_v1_chr9_+_65524331_65524426	0.832575	HNF4A_NR2F1,2.p2	AK169243|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	NM_010952|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK143231|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK146074|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK160444|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168853|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168662|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC055442|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC083114|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AF057298|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC005477|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC110690|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene
mm9_v1_chr2_-_163367446_163367459	0.831181	HNF4A_NR2F1,2.p2	BC025862|0610008F07Rik|68314|RIKEN cDNA 0610008F07 gene	AK002328|0610008F07Rik|68314|RIKEN cDNA 0610008F07 gene
mm9_v1_chr11_+_100938836_100938840	0.82902	HNF4A_NR2F1,2.p2	AK184461|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK218979|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr18_+_35278585_35278617	0.827864	HNF4A_NR2F1,2.p2	BC105576|Ctnna1|12385|catenin (cadherin associated protein), alpha 1	AK004623|Ctnna1|12385|catenin (cadherin associated protein), alpha 1
mm9_v1_chr1_-_192994532_192994569	0.827758	HNF4A_NR2F1,2.p2	AK217100|Atf3|11910|activating transcription factor 3
mm9_v1_chr11_+_69715314_69715319	0.826271	HNF4A_NR2F1,2.p2	BC158107|Neurl4|216860|neuralized homolog 4 (Drosophila)	BC172172|Neurl4|216860|neuralized homolog 4 (Drosophila)
mm9_v1_chr6_-_23198140_23198361	0.825801	HNF4A_NR2F1,2.p2	AK014242|Fezf1|73191|Fez family zinc finger 1	BC119565|Fezf1|73191|Fez family zinc finger 1	BC119566|Fezf1|73191|Fez family zinc finger 1	NM_028462|Fezf1|73191|Fez family zinc finger 1	BC049157|Fezf1|73191|Fez family zinc finger 1
mm9_v1_chr11_-_77979070_77979090	0.823549	HNF4A_NR2F1,2.p2	AK046015|Traf4|22032|TNF receptor associated factor 4
mm9_v1_chr11_-_6526020_6526080	0.822753	HNF4A_NR2F1,2.p2	BC016483|Tbrg4|21379|transforming growth factor beta regulated gene 4	AK129245|Tbrg4|21379|transforming growth factor beta regulated gene 4	BC031155|Tbrg4|21379|transforming growth factor beta regulated gene 4	BC031910|Tbrg4|21379|transforming growth factor beta regulated gene 4	AK028966|Tbrg4|21379|transforming growth factor beta regulated gene 4	AK144813|Tbrg4|21379|transforming growth factor beta regulated gene 4	AK166760|Tbrg4|21379|transforming growth factor beta regulated gene 4	AK168088|Tbrg4|21379|transforming growth factor beta regulated gene 4	NM_001130457|Tbrg4|21379|transforming growth factor beta regulated gene 4	NM_134011|Tbrg4|21379|transforming growth factor beta regulated gene 4
mm9_v1_chr4_-_106136929_106136933	0.822536	HNF4A_NR2F1,2.p2	NM_153565|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9	BC038085|Pcsk9|100102|proprotein convertase subtilisin/kexin type 9
mm9_v1_chr8_-_114400574_114400649	0.822476	HNF4A_NR2F1,2.p2	AK018496|Tmem170|66817|transmembrane protein 170	NM_025781|Tmem170|66817|transmembrane protein 170	AK007926|Tmem170|66817|transmembrane protein 170	BC139377|Tmem170|66817|transmembrane protein 170	BC145964|Tmem170|66817|transmembrane protein 170
mm9_v1_chr15_+_73342989_73343101	0.818331	HNF4A_NR2F1,2.p2	NM_001081066|Dennd3|105841|DENN/MADD domain containing 3	AK173046|Dennd3|105841|DENN/MADD domain containing 3	BC132389|Dennd3|105841|DENN/MADD domain containing 3	BC137791|Dennd3|105841|DENN/MADD domain containing 3	BC144912|Dennd3|105841|DENN/MADD domain containing 3
mm9_v1_chr8_-_13396775_13396824	0.817624	HNF4A_NR2F1,2.p2	AK008180|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK008686|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK009499|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK009670|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK009832|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK009994|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK010003|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK010030|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	BC120705|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	BC125292|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	NM_009724|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide	AK010049|Atp4b|11945|ATPase, H+/K+ exchanging, beta polypeptide
mm9_v1_chr17_+_24054421_24054424	0.817619	HNF4A_NR2F1,2.p2	NM_001077633|Dcpp3|620253|demilune cell and parotid protein 3
mm9_v1_chr12_-_112217151_112217320	0.816928	HNF4A_NR2F1,2.p2	AK010867|Ankrd9|74251|ankyrin repeat domain 9	BC023687|Ankrd9|74251|ankyrin repeat domain 9	AK172167|Ankrd9|74251|ankyrin repeat domain 9	AK032641|Ankrd9|74251|ankyrin repeat domain 9	NM_175207|Ankrd9|74251|ankyrin repeat domain 9	AK051108|Ankrd9|74251|ankyrin repeat domain 9
mm9_v1_chr9_-_78435825_78435857	0.816607	HNF4A_NR2F1,2.p2	AK029102|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	AK087395|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	NM_172773|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5
mm9_v1_chr6_+_83008064_83008097	0.816498	HNF4A_NR2F1,2.p2	AK010062|Dqx1|93838|DEAQ RNA-dependent ATPase
mm9_v1_chr7_+_52112742_52112902	0.816339	HNF4A_NR2F1,2.p2	AK159535|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK159770|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK160020|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AF129451|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr17_+_36116868_36116882	0.815544	HNF4A_NR2F1,2.p2	BC013243|Gnl1|14670|guanine nucleotide binding protein-like 1
mm9_v1_chr18_+_43923976_43923988	0.815086	HNF4A_NR2F1,2.p2	AK136373|Scgb3a2|117158|secretoglobin, family 3A, member 2	AK136396|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274959|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274960|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF274961|Scgb3a2|117158|secretoglobin, family 3A, member 2	BC061046|Scgb3a2|117158|secretoglobin, family 3A, member 2	NM_054038|Scgb3a2|117158|secretoglobin, family 3A, member 2	AF439546|Scgb3a2|117158|secretoglobin, family 3A, member 2
mm9_v1_chr6_-_69651268_69651335	0.806096	HNF4A_NR2F1,2.p2	
mm9_v1_chr7_-_148379844_148379932	0.805641	HNF4A_NR2F1,2.p2	BC061885|Hras1|15461|Harvey rat sarcoma virus oncogene 1	BC050837|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130443|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_001130444|Hras1|15461|Harvey rat sarcoma virus oncogene 1	NM_008284|Hras1|15461|Harvey rat sarcoma virus oncogene 1
mm9_v1_chr7_+_19609771_19609790	0.804877	HNF4A_NR2F1,2.p2	AK155375|Sympk|68188|symplekin	AK172040|Sympk|68188|symplekin	BC049852|Sympk|68188|symplekin
mm9_v1_chr16_+_84835361_84835405	0.802596	HNF4A_NR2F1,2.p2	AY282793|Gabpa|14390|GA repeat binding protein, alpha	M74515|Gabpa|14390|GA repeat binding protein, alpha	BC052448|Gabpa|14390|GA repeat binding protein, alpha	NM_008065|Gabpa|14390|GA repeat binding protein, alpha
mm9_v1_chr10_-_77365164_77365282	0.794191	HNF4A_NR2F1,2.p2	AY061858|Lrrc3|237387|leucine rich repeat containing 3	AK043535|Lrrc3|237387|leucine rich repeat containing 3	NM_145152|Lrrc3|237387|leucine rich repeat containing 3
mm9_v1_chr11_+_5761862_5761989	0.789907	HNF4A_NR2F1,2.p2	NM_009636|Aebp1|11568|AE binding protein 1	AK128980|Aebp1|11568|AE binding protein 1	AK158276|Aebp1|11568|AE binding protein 1	AK159342|Aebp1|11568|AE binding protein 1	AK159409|Aebp1|11568|AE binding protein 1	BC082577|Aebp1|11568|AE binding protein 1	AF053943|Aebp1|11568|AE binding protein 1	AK159330|Aebp1|11568|AE binding protein 1	AK159774|Aebp1|11568|AE binding protein 1	AK159957|Aebp1|11568|AE binding protein 1	AK159377|Aebp1|11568|AE binding protein 1
mm9_v1_chrX_+_146981989_146982012	0.78555	HNF4A_NR2F1,2.p2	AK002642|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165262|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M63244|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK165257|Alas2|11656|aminolevulinic acid synthase 2, erythroid	AK172094|Alas2|11656|aminolevulinic acid synthase 2, erythroid	M15268|Alas2|11656|aminolevulinic acid synthase 2, erythroid	BC150870|Alas2|11656|aminolevulinic acid synthase 2, erythroid
mm9_v1_chr17_+_49574463_49574529	0.78051	HNF4A_NR2F1,2.p2	BC049914|Mocs1|56738|molybdenum cofactor synthesis 1
mm9_v1_chr7_-_52921617_52921763	0.778397	HNF4A_NR2F1,2.p2	BC138534|Fut2|14344|fucosyltransferase 2	BC145831|Fut2|14344|fucosyltransferase 2	AK033520|Fut2|14344|fucosyltransferase 2	NM_018876|Fut2|14344|fucosyltransferase 2	AK033586|Fut2|14344|fucosyltransferase 2
mm9_v1_chr11_+_102006847_102006873	0.778233	HNF4A_NR2F1,2.p2	BC057990|Nags|217214|N-acetylglutamate synthase	AF462069|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr7_+_59134514_59134648	0.776394	HNF4A_NR2F1,2.p2	NM_008087|Gas2|14453|growth arrest specific 2	M21828|Gas2|14453|growth arrest specific 2
mm9_v1_chr11_+_75469516_75469674	0.77615	HNF4A_NR2F1,2.p2	AK171107|Myo1c|17913|myosin IC	NM_001080775|Myo1c|17913|myosin IC	AK154294|Myo1c|17913|myosin IC	AK165680|Myo1c|17913|myosin IC	AY007255|Myo1c|17913|myosin IC
mm9_v1_chr6_-_83606025_83606093	0.775909	HNF4A_NR2F1,2.p2	D88577|Clec4f|51811|C-type lectin domain family 4, member f	BC013647|Clec4f|51811|C-type lectin domain family 4, member f
mm9_v1_chr2_-_91771919_91771949	0.774047	HNF4A_NR2F1,2.p2	AK032742|Mdk|17242|midkine	AK084457|Mdk|17242|midkine	NM_001012336|Mdk|17242|midkine
mm9_v1_chr5_+_115347750_115347773	0.772757	HNF4A_NR2F1,2.p2	AK160630|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr17_+_35035898_35035925	0.769294	HNF4A_NR2F1,2.p2	AK154246|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	AB077210|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2	NM_145830|Ehmt2|110147|euchromatic histone lysine N-methyltransferase 2
mm9_v1_chr14_-_52640348_52640407	0.769149	HNF4A_NR2F1,2.p2	BC096486|Zfp219|69890|zinc finger protein 219	AB063578|Zfp219|69890|zinc finger protein 219	NM_027248|Zfp219|69890|zinc finger protein 219
mm9_v1_chr17_+_33947466_33947491	0.767405	HNF4A_NR2F1,2.p2	AK002623|Kank3|80880|KN motif and ankyrin repeat domains 3	AK132011|Kank3|80880|KN motif and ankyrin repeat domains 3	BC061055|Kank3|80880|KN motif and ankyrin repeat domains 3	NM_030697|Kank3|80880|KN motif and ankyrin repeat domains 3	BC037741|Kank3|80880|KN motif and ankyrin repeat domains 3
mm9_v1_chr5_-_36826896_36826947	0.767169	HNF4A_NR2F1,2.p2	NM_001170454|Tada2b|231151|transcriptional adaptor 2B
mm9_v1_chr11_+_75275123_75275158	0.766715	HNF4A_NR2F1,2.p2	AK018628|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene	AK008813|2210403K04Rik|100042498|RIKEN cDNA 2210403K04 gene
mm9_v1_chr13_-_72101161_72101175	0.763443	HNF4A_NR2F1,2.p2	AK133937|Irx1|16371|Iroquois related homeobox 1 (Drosophila)	NM_010573|Irx1|16371|Iroquois related homeobox 1 (Drosophila)
mm9_v1_chr14_-_73785067_73785067	0.763439	HNF4A_NR2F1,2.p2	AK005125|Itm2b|16432|integral membrane protein 2B	AK152731|Itm2b|16432|integral membrane protein 2B	AK159962|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr5_+_36807807_36807839	0.762931	HNF4A_NR2F1,2.p2	AK161688|Grpel1|17713|GrpE-like 1, mitochondrial	AK048732|Grpel1|17713|GrpE-like 1, mitochondrial	NM_024478|Grpel1|17713|GrpE-like 1, mitochondrial	AK089113|Grpel1|17713|GrpE-like 1, mitochondrial	AK050445|Grpel1|17713|GrpE-like 1, mitochondrial
mm9_v1_chr9_+_53698053_53698076	0.762119	HNF4A_NR2F1,2.p2	AK009005|Sln|66402|sarcolipin	AK008896|Sln|66402|sarcolipin	NM_025540|Sln|66402|sarcolipin	AK008863|Sln|66402|sarcolipin	BC028496|Sln|66402|sarcolipin
mm9_v1_chr7_+_31017092_31017092	0.757083	HNF4A_NR2F1,2.p2	BC062812|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I	NM_027259|Polr2i|69920|polymerase (RNA) II (DNA directed) polypeptide I
mm9_v1_chr10_-_43260744_43260803	0.755987	HNF4A_NR2F1,2.p2	AK008795|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK163304|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	BC013506|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK006199|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	NM_026411|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK007370|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene
mm9_v1_chr11_+_102006884_102006900	0.755184	HNF4A_NR2F1,2.p2	AJ489814|Nags|217214|N-acetylglutamate synthase	NM_145829|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr18_+_35886642_35886642	0.75497	HNF4A_NR2F1,2.p2	AK162297|1700066B19Rik|73449|RIKEN cDNA 1700066B19 gene	NM_001033168|1700066B19Rik|73449|RIKEN cDNA 1700066B19 gene
mm9_v1_chr6_+_124662272_124662375	0.75379	HNF4A_NR2F1,2.p2	AK158423|Phb2|12034|prohibitin 2	NM_007531|Phb2|12034|prohibitin 2	AK151952|Phb2|12034|prohibitin 2	AK152375|Phb2|12034|prohibitin 2	AK153368|Phb2|12034|prohibitin 2	AK132058|Phb2|12034|prohibitin 2	AK002334|Phb2|12034|prohibitin 2	AK011107|Phb2|12034|prohibitin 2	AK132052|Phb2|12034|prohibitin 2	AY211613|Phb2|12034|prohibitin 2	X78683|Phb2|12034|prohibitin 2	AK090088|Phb2|12034|prohibitin 2	BC145875|Phb2|12034|prohibitin 2
mm9_v1_chr10_+_107599446_107599460	0.750866	HNF4A_NR2F1,2.p2	AK004785|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_027892|Ppp1r12a|17931|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm9_v1_chr12_+_103708119_103708119	0.749994	HNF4A_NR2F1,2.p2	BC086782|Golga5|27277|golgi autoantigen, golgin subfamily a, 5	NM_013747|Golga5|27277|golgi autoantigen, golgin subfamily a, 5
mm9_v1_chr16_-_4523051_4523052	0.74931	HNF4A_NR2F1,2.p2	AB113383|Srl|106393|sarcalumenin	NM_175347|Srl|106393|sarcalumenin
mm9_v1_chr7_+_52105323_52105411	0.742993	HNF4A_NR2F1,2.p2	BC002180|Akt1s1|67605|AKT1 substrate 1 (proline-rich)
mm9_v1_chr2_+_26439383_26439424	0.741056	HNF4A_NR2F1,2.p2	NM_198724|Egfl7|353156|EGF-like domain 7	NM_198725|Egfl7|353156|EGF-like domain 7	AK002601|Egfl7|353156|EGF-like domain 7	AY239290|Egfl7|353156|EGF-like domain 7	BC024610|Egfl7|353156|EGF-like domain 7
mm9_v1_chr5_+_115729684_115729726	0.739467	HNF4A_NR2F1,2.p2	AK014348|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK045993|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK050334|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	BC052345|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK007496|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	NM_026504|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)	AK009825|Coq5|52064|coenzyme Q5 homolog, methyltransferase (yeast)
mm9_v1_chr2_+_151822270_151822363	0.73619	HNF4A_NR2F1,2.p2	AK029091|2310046K01Rik|69698|RIKEN cDNA 2310046K01 gene	AK170158|2310046K01Rik|69698|RIKEN cDNA 2310046K01 gene	AK009850|2310046K01Rik|69698|RIKEN cDNA 2310046K01 gene
mm9_v1_chr19_+_11844839_11844928	0.732776	HNF4A_NR2F1,2.p2	AK165616|Mrpl16|94063|mitochondrial ribosomal protein L16	BC044721|Mrpl16|94063|mitochondrial ribosomal protein L16	AK011971|Mrpl16|94063|mitochondrial ribosomal protein L16	BC029009|Mrpl16|94063|mitochondrial ribosomal protein L16	AB049643|Mrpl16|94063|mitochondrial ribosomal protein L16	NM_025606|Mrpl16|94063|mitochondrial ribosomal protein L16	AK004034|Mrpl16|94063|mitochondrial ribosomal protein L16	AK009687|Mrpl16|94063|mitochondrial ribosomal protein L16
mm9_v1_chr7_+_107520742_107520781	0.730219	HNF4A_NR2F1,2.p2	NM_001017985|C2cd3|277939|C2 calcium-dependent domain containing 3	AK171263|C2cd3|277939|C2 calcium-dependent domain containing 3
mm9_v1_chr19_-_53113031_53113137	0.727076	HNF4A_NR2F1,2.p2	BC065174|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	NM_133216|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AK166715|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AK179372|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AK183686|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AK189536|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AK169024|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AK149676|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AF363970|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	AK146033|Xpnpep1|170750|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
mm9_v1_chr6_+_135015679_135015703	0.726483	HNF4A_NR2F1,2.p2	NM_181444|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A	BC039217|Gprc5a|232431|G protein-coupled receptor, family C, group 5, member A
mm9_v1_chr2_-_74497475_74497613	0.726178	HNF4A_NR2F1,2.p2	M93128|Evx2|14029|even skipped homeotic gene 2 homolog	NM_007967|Evx2|14029|even skipped homeotic gene 2 homolog	BC061467|Evx2|14029|even skipped homeotic gene 2 homolog
mm9_v1_chr19_-_47538898_47538933	0.726006	HNF4A_NR2F1,2.p2	AJ007012|Sh3pxd2a|14218|SH3 and PX domains 2A	NM_001164717|Sh3pxd2a|14218|SH3 and PX domains 2A	NM_008018|Sh3pxd2a|14218|SH3 and PX domains 2A
mm9_v1_chr6_-_24477549_24477560	0.7257	HNF4A_NR2F1,2.p2	AK008156|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008286|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008414|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019242|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	BC028633|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK008155|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009396|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009461|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009493|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009608|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK009652|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010024|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK010090|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019084|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019201|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019215|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019291|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019354|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr8_-_11312686_11312717	0.724319	HNF4A_NR2F1,2.p2	BC072650|Col4a1|12826|collagen, type IV, alpha 1
mm9_v1_chr13_+_55254169_55254235	0.722881	HNF4A_NR2F1,2.p2	AK084850|Fgfr4|14186|fibroblast growth factor receptor 4	NM_008011|Fgfr4|14186|fibroblast growth factor receptor 4	AK085723|Fgfr4|14186|fibroblast growth factor receptor 4	X59927|Fgfr4|14186|fibroblast growth factor receptor 4
mm9_v1_chr6_+_125311859_125312178	0.72265	HNF4A_NR2F1,2.p2	AK190321|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a
mm9_v1_chr13_+_14156038_14156092	0.722521	HNF4A_NR2F1,2.p2	AK136105|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK041414|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_194262|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	NM_198122|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK161669|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)	AK031062|Arid4b|94246|AT rich interactive domain 4B (RBP1-like)
mm9_v1_chr18_+_24812370_24812394	0.722008	HNF4A_NR2F1,2.p2	AK076385|Mocos|68591|molybdenum cofactor sulfurase	BC016223|Mocos|68591|molybdenum cofactor sulfurase
mm9_v1_chr6_-_137597775_137597813	0.721839	HNF4A_NR2F1,2.p2	L21671|Eps8|13860|epidermal growth factor receptor pathway substrate 8
mm9_v1_chr2_+_58998938_58998957	0.720409	HNF4A_NR2F1,2.p2	BC019128|Pkp4|227937|plakophilin 4	BC037597|Pkp4|227937|plakophilin 4
mm9_v1_chrX_-_159326220_159326424	0.719563	HNF4A_NR2F1,2.p2	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr11_-_16408126_16408197	0.718392	HNF4A_NR2F1,2.p2	AK160390|Sec61g|20335|SEC61, gamma subunit	AK012644|Sec61g|20335|SEC61, gamma subunit	BC019129|Sec61g|20335|SEC61, gamma subunit	BC019158|Sec61g|20335|SEC61, gamma subunit
mm9_v1_chr7_-_31514527_31514579	0.713484	HNF4A_NR2F1,2.p2	AK010168|Tmem147|69804|transmembrane protein 147	AK160267|Tmem147|69804|transmembrane protein 147	NM_027215|Tmem147|69804|transmembrane protein 147
mm9_v1_chr9_+_110666191_110666214	0.71093	HNF4A_NR2F1,2.p2	AK011518|Myl3|17897|myosin, light polypeptide 3
mm9_v1_chr12_-_86680251_86680341	0.710284	HNF4A_NR2F1,2.p2	BC117972|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	BC117971|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AJ489828|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	AK173323|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9	NM_145138|Nek9|217718|NIMA (never in mitosis gene a)-related expressed kinase 9
mm9_v1_chr17_+_35272145_35272203	0.708114	HNF4A_NR2F1,2.p2	NM_057171|Bag6|224727|BCL2-associated athanogene 6	AK148796|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr7_+_148133054_148133245	0.707056	HNF4A_NR2F1,2.p2	AK216941|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)
mm9_v1_chr4_+_147320793_147320843	0.706948	HNF4A_NR2F1,2.p2	AK183513|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK197606|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene	AK209381|2510039O18Rik|77034|RIKEN cDNA 2510039O18 gene
mm9_v1_chr7_-_31514445_31514522	0.706704	HNF4A_NR2F1,2.p2	AK008089|Tmem147|69804|transmembrane protein 147	AK007753|Tmem147|69804|transmembrane protein 147	BC147300|Tmem147|69804|transmembrane protein 147	BC147301|Tmem147|69804|transmembrane protein 147
mm9_v1_chr10_+_127525425_127525449	0.704622	HNF4A_NR2F1,2.p2	AK003460|Atp5b|11947|ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
mm9_v1_chr2_+_132088974_132089064	0.704434	HNF4A_NR2F1,2.p2	AK050589|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	BC003852|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	AK147541|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	NM_138651|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	AK170888|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	AK036328|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	AK166001|Cds2|110911|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
mm9_v1_chr6_-_83606100_83606109	0.702237	HNF4A_NR2F1,2.p2	AK040696|Clec4f|51811|C-type lectin domain family 4, member f	NM_016751|Clec4f|51811|C-type lectin domain family 4, member f
mm9_v1_chr4_+_108520389_108520516	0.701728	HNF4A_NR2F1,2.p2	BC021493|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK003197|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	NM_029571|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK148185|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK150178|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK156755|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)
mm9_v1_chr11_-_118162557_118162687	0.701194	HNF4A_NR2F1,2.p2	
mm9_v1_chr14_+_47451869_47451942	0.699296	HNF4A_NR2F1,2.p2	AK004156|Cgrrf1|68755|cell growth regulator with ring finger domain 1	AK007402|Cgrrf1|68755|cell growth regulator with ring finger domain 1	BC037677|Cgrrf1|68755|cell growth regulator with ring finger domain 1	AK030403|Cgrrf1|68755|cell growth regulator with ring finger domain 1	AK030755|Cgrrf1|68755|cell growth regulator with ring finger domain 1	NM_026832|Cgrrf1|68755|cell growth regulator with ring finger domain 1
mm9_v1_chr11_+_115626816_115626845	0.69628	HNF4A_NR2F1,2.p2	BC053088|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr1_+_137648101_137648216	0.695602	HNF4A_NR2F1,2.p2	AK004065|Csrp1|13007|cysteine and glycine-rich protein 1	AK178605|Csrp1|13007|cysteine and glycine-rich protein 1	AK217688|Csrp1|13007|cysteine and glycine-rich protein 1
mm9_v1_chr5_-_137463376_137463426	0.694323	HNF4A_NR2F1,2.p2	AK012199|Znhit1|70103|zinc finger, HIT domain containing 1
mm9_v1_chr19_-_7351647_7351726	0.693722	HNF4A_NR2F1,2.p2	AK194221|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK218760|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr9_+_30234913_30234913	0.692966	HNF4A_NR2F1,2.p2	BC063262|Snx19|102607|sorting nexin 19	NM_028874|Snx19|102607|sorting nexin 19
mm9_v1_chr6_+_66846884_66846886	0.691582	HNF4A_NR2F1,2.p2	NM_001177558|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12	AK166299|Gng12|14701|guanine nucleotide binding protein (G protein), gamma 12
mm9_v1_chr9_-_107571294_107571298	0.688064	HNF4A_NR2F1,2.p2	BC055339|Slc38a3|76257|solute carrier family 38, member 3
mm9_v1_chr17_-_35109068_35109102	0.687811	HNF4A_NR2F1,2.p2	BC054782|Hspa1a|193740|heat shock protein 1A	BC032044|Hspa1a|193740|heat shock protein 1A	AK132331|Hspa1a|193740|heat shock protein 1A	AK160912|Hspa1a|193740|heat shock protein 1A	AK171820|Hspa1a|193740|heat shock protein 1A	NM_010479|Hspa1a|193740|heat shock protein 1A
mm9_v1_chr19_-_31839462_31839522	0.685899	HNF4A_NR2F1,2.p2	AK051624|Prkg1|19091|protein kinase, cGMP-dependent, type I	AK083991|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_001013833|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chr14_-_100548982_100549014	0.682972	HNF4A_NR2F1,2.p2	AB221575|Klf12|16597|Kruppel-like factor 12	Y14295|Klf12|16597|Kruppel-like factor 12	BC067408|Klf12|16597|Kruppel-like factor 12	NM_010636|Klf12|16597|Kruppel-like factor 12
mm9_v1_chr7_-_31514525_31514525	0.680975	HNF4A_NR2F1,2.p2	BC035323|Tmem147|69804|transmembrane protein 147
mm9_v1_chr3_-_85946524_85946612	0.679455	HNF4A_NR2F1,2.p2	AK150796|Rps3a|20091|ribosomal protein S3A	AK151982|Rps3a|20091|ribosomal protein S3A	NM_016959|Rps3a|20091|ribosomal protein S3A
mm9_v1_chr11_-_16408103_16408109	0.677764	HNF4A_NR2F1,2.p2	AK012393|Sec61g|20335|SEC61, gamma subunit
mm9_v1_chr7_-_105268002_105268002	0.677559	HNF4A_NR2F1,2.p2	NM_008663|Myo7a|17921|myosin VIIA
mm9_v1_chr8_+_74685098_74685285	0.677182	HNF4A_NR2F1,2.p2	NM_023126|Rab8a|17274|RAB8A, member RAS oncogene family	AK076048|Rab8a|17274|RAB8A, member RAS oncogene family	AK147178|Rab8a|17274|RAB8A, member RAS oncogene family	AK079306|Rab8a|17274|RAB8A, member RAS oncogene family	S53270|Rab8a|17274|RAB8A, member RAS oncogene family	AK009259|Rab8a|17274|RAB8A, member RAS oncogene family	AK010862|Rab8a|17274|RAB8A, member RAS oncogene family	AK080740|Rab8a|17274|RAB8A, member RAS oncogene family	AK165690|Rab8a|17274|RAB8A, member RAS oncogene family	AB232600|Rab8a|17274|RAB8A, member RAS oncogene family	BC019990|Rab8a|17274|RAB8A, member RAS oncogene family	AY974570|Rab8a|17274|RAB8A, member RAS oncogene family
mm9_v1_chr14_-_21299301_21299354	0.676114	HNF4A_NR2F1,2.p2	NM_001110794|Anxa7|11750|annexin A7	NM_009674|Anxa7|11750|annexin A7
mm9_v1_chr7_-_129245303_129245368	0.673176	HNF4A_NR2F1,2.p2	AK167447|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK089103|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC092379|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC060951|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018717|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK008788|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK009698|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK010307|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK011302|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018688|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK151719|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK152995|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	NM_028177|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm9_v1_chr1_+_153275671_153275919	0.672572	HNF4A_NR2F1,2.p2	AK148524|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene	BC061491|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene	AK146088|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene	NM_026876|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene	BC110425|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene	AK088077|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene	BC064024|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene	BC132299|1190005F20Rik|98685|RIKEN cDNA 1190005F20 gene
mm9_v1_chrX_+_71674576_71674653	0.668476	HNF4A_NR2F1,2.p2	AK148163|Ikbkg|16151|inhibitor of kappaB kinase gamma	NM_001161422|Ikbkg|16151|inhibitor of kappaB kinase gamma
mm9_v1_chr10_+_78037170_78037331	0.667272	HNF4A_NR2F1,2.p2	NM_173751|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	BC056459|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like	BC052054|Ilvbl|216136|ilvB (bacterial acetolactate synthase)-like
mm9_v1_chr9_-_78435778_78435821	0.663801	HNF4A_NR2F1,2.p2	AK169868|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5	BC058785|Slc17a5|235504|solute carrier family 17 (anion/sugar transporter), member 5
mm9_v1_chr2_+_76513326_76513402	0.663701	HNF4A_NR2F1,2.p2	BC031110|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	NM_031256|Plekha3|83435|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm9_v1_chr19_-_6543005_6543069	0.662869	HNF4A_NR2F1,2.p2	BC035927|Slc22a12|20521|solute carrier family 22 (organic anion/cation transporter), member 12	NM_009203|Slc22a12|20521|solute carrier family 22 (organic anion/cation transporter), member 12
mm9_v1_chr13_+_37980739_37980739	0.662242	HNF4A_NR2F1,2.p2	NM_001177869|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr12_-_110132316_110132383	0.661671	HNF4A_NR2F1,2.p2	BC046232|Wars|22375|tryptophanyl-tRNA synthetase	AK183530|Wars|22375|tryptophanyl-tRNA synthetase	AK150090|Wars|22375|tryptophanyl-tRNA synthetase	AK150267|Wars|22375|tryptophanyl-tRNA synthetase	AK152966|Wars|22375|tryptophanyl-tRNA synthetase	AK153337|Wars|22375|tryptophanyl-tRNA synthetase	NM_001164314|Wars|22375|tryptophanyl-tRNA synthetase
mm9_v1_chr11_-_62094853_62094905	0.654268	HNF4A_NR2F1,2.p2	BC109343|Zswim7|69747|zinc finger, SWIM-type containing 7	AK010472|Zswim7|69747|zinc finger, SWIM-type containing 7	NM_027198|Zswim7|69747|zinc finger, SWIM-type containing 7
mm9_v1_chr15_+_12047769_12048008	0.650187	HNF4A_NR2F1,2.p2	BC094220|Zfr|22763|zinc finger RNA binding protein
mm9_v1_chr2_-_156138199_156138439	0.64896	HNF4A_NR2F1,2.p2	AK220179|Scand1|19018|SCAN domain-containing 1	BC010724|Scand1|19018|SCAN domain-containing 1	AF220501|Scand1|19018|SCAN domain-containing 1	AF106473|Scand1|19018|SCAN domain-containing 1	AK088253|Scand1|19018|SCAN domain-containing 1	AK009115|Scand1|19018|SCAN domain-containing 1	NM_020255|Scand1|19018|SCAN domain-containing 1
mm9_v1_chr7_-_52589025_52589193	0.639373	HNF4A_NR2F1,2.p2	BC049165|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4	AK082574|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4	AK044094|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4	AJ575814|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4	BC096475|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4	NM_175130|Trpm4|68667|transient receptor potential cation channel, subfamily M, member 4
mm9_v1_chr6_-_24477545_24477547	0.639005	HNF4A_NR2F1,2.p2	AK011579|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK011947|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5	AK019207|Ndufa5|68202|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm9_v1_chr7_+_123175492_123175501	0.636504	HNF4A_NR2F1,2.p2	AK003497|1110006G14Rik|68469|RIKEN cDNA 1110006G14 gene
mm9_v1_chr16_+_20672854_20672888	0.636303	HNF4A_NR2F1,2.p2	AK053144|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK142399|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK133903|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK139371|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	AK162698|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1	BC066038|Eif4g1|208643|eukaryotic translation initiation factor 4, gamma 1
mm9_v1_chrX_+_97689629_97689706	0.636159	HNF4A_NR2F1,2.p2	NM_008784|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK032709|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK141470|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	BC089567|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	AK017166|Igbp1|18518|immunoglobulin (CD79A) binding protein 1	L31652|Igbp1|18518|immunoglobulin (CD79A) binding protein 1
mm9_v1_chr8_+_86496844_86496952	0.6347	HNF4A_NR2F1,2.p2	NM_008854|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	BC003238|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	BC054834|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha	M12303|Prkaca|18747|protein kinase, cAMP dependent, catalytic, alpha
mm9_v1_chr11_+_62944973_62945074	0.631274	HNF4A_NR2F1,2.p2	NM_008885|Pmp22|18858|peripheral myelin protein 22	M32240|Pmp22|18858|peripheral myelin protein 22	BC010765|Pmp22|18858|peripheral myelin protein 22	AK076005|Pmp22|18858|peripheral myelin protein 22	AK171745|Pmp22|18858|peripheral myelin protein 22
mm9_v1_chr15_-_54670878_54670918	0.629957	HNF4A_NR2F1,2.p2	AK046689|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr10_-_124765435_124765590	0.628543	HNF4A_NR2F1,2.p2	BC117803|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC117804|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC126960|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	BC089606|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	AF058054|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7	NM_011391|Slc16a7|20503|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm9_v1_chr7_-_148661022_148661034	0.628409	HNF4A_NR2F1,2.p2	AK011021|Polr2l|66491|polymerase (RNA) II (DNA directed) polypeptide L	AK149137|Polr2l|66491|polymerase (RNA) II (DNA directed) polypeptide L	AK168159|Polr2l|66491|polymerase (RNA) II (DNA directed) polypeptide L
mm9_v1_chr1_-_51972816_51972829	0.626602	HNF4A_NR2F1,2.p2	NM_001161817|Myo1b|17912|myosin IB	NM_010863|Myo1b|17912|myosin IB
mm9_v1_chr8_-_107148093_107148295	0.623419	HNF4A_NR2F1,2.p2	AK093905|Cdh16|12556|cadherin 16	AK052636|Cdh16|12556|cadherin 16	BC015251|Cdh16|12556|cadherin 16	AF016271|Cdh16|12556|cadherin 16	NM_007663|Cdh16|12556|cadherin 16	AJ609635|Cdh16|12556|cadherin 16	AK164546|Cdh16|12556|cadherin 16
mm9_v1_chr18_+_62708564_62708648	0.623365	HNF4A_NR2F1,2.p2	AK039062|Spink10|328971|serine peptidase inhibitor, Kazal type 10	DQ437330|Spink10|328971|serine peptidase inhibitor, Kazal type 10	NM_177829|Spink10|328971|serine peptidase inhibitor, Kazal type 10	AK162840|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125360|Spink10|328971|serine peptidase inhibitor, Kazal type 10	BC125362|Spink10|328971|serine peptidase inhibitor, Kazal type 10
mm9_v1_chr7_+_119517858_119517858	0.623328	HNF4A_NR2F1,2.p2	BC031386|Micalcl|100504195|MICAL C-terminal like	NM_027587|Micalcl|100504195|MICAL C-terminal like
mm9_v1_chr19_+_10257363_10257524	0.623086	HNF4A_NR2F1,2.p2	NM_146094|Fads1|76267|fatty acid desaturase 1	BC026831|Fads1|76267|fatty acid desaturase 1	AK154367|Fads1|76267|fatty acid desaturase 1	BC022139|Fads1|76267|fatty acid desaturase 1	BC026848|Fads1|76267|fatty acid desaturase 1	AB072976|Fads1|76267|fatty acid desaturase 1	AK080706|Fads1|76267|fatty acid desaturase 1	AF061504|Fads1|76267|fatty acid desaturase 1	AK083959|Fads1|76267|fatty acid desaturase 1	BC063053|Fads1|76267|fatty acid desaturase 1
mm9_v1_chr7_-_35015309_35015367	0.622561	HNF4A_NR2F1,2.p2	AK147124|Gpi1|14751|glucose phosphate isomerase 1	NM_008155|Gpi1|14751|glucose phosphate isomerase 1
mm9_v1_chr17_+_79315805_79315867	0.622346	HNF4A_NR2F1,2.p2	NM_001177402|1110001A16Rik|68554|RIKEN cDNA 1110001A16 gene	NM_001177403|1110001A16Rik|68554|RIKEN cDNA 1110001A16 gene	AK003199|1110001A16Rik|68554|RIKEN cDNA 1110001A16 gene	AK027910|1110001A16Rik|68554|RIKEN cDNA 1110001A16 gene
mm9_v1_chr5_+_32000312_32000424	0.621299	HNF4A_NR2F1,2.p2	AK156929|Bre|107976|brain and reproductive organ-expressed protein	AK020047|Bre|107976|brain and reproductive organ-expressed protein	BC061000|Bre|107976|brain and reproductive organ-expressed protein	AK050695|Bre|107976|brain and reproductive organ-expressed protein	AK080991|Bre|107976|brain and reproductive organ-expressed protein	AK166884|Bre|107976|brain and reproductive organ-expressed protein	AF440752|Bre|107976|brain and reproductive organ-expressed protein	AF527952|Bre|107976|brain and reproductive organ-expressed protein	AF527953|Bre|107976|brain and reproductive organ-expressed protein	AF527954|Bre|107976|brain and reproductive organ-expressed protein	AF527955|Bre|107976|brain and reproductive organ-expressed protein	AF538925|Bre|107976|brain and reproductive organ-expressed protein	NM_144541|Bre|107976|brain and reproductive organ-expressed protein	NM_181279|Bre|107976|brain and reproductive organ-expressed protein	NM_181280|Bre|107976|brain and reproductive organ-expressed protein	NM_181281|Bre|107976|brain and reproductive organ-expressed protein	NM_181282|Bre|107976|brain and reproductive organ-expressed protein
mm9_v1_chr11_+_115465436_115465505	0.620092	HNF4A_NR2F1,2.p2	AK131937|Mrps7|50529|mitchondrial ribosomal protein S7	AK012225|Mrps7|50529|mitchondrial ribosomal protein S7	BC049636|Mrps7|50529|mitchondrial ribosomal protein S7	NM_025305|Mrps7|50529|mitchondrial ribosomal protein S7	AK162024|Mrps7|50529|mitchondrial ribosomal protein S7	AK009251|Mrps7|50529|mitchondrial ribosomal protein S7
mm9_v1_chr11_-_69476065_69476093	0.61921	HNF4A_NR2F1,2.p2	BC026776|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK172020|Mpdu1|24070|mannose-P-dolichol utilization defect 1	BC048871|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AB024713|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK040432|Mpdu1|24070|mannose-P-dolichol utilization defect 1	AK089426|Mpdu1|24070|mannose-P-dolichol utilization defect 1
mm9_v1_chr1_-_51972771_51972812	0.618395	HNF4A_NR2F1,2.p2	BC054786|Myo1b|17912|myosin IB	AK161062|Myo1b|17912|myosin IB	AK141207|Myo1b|17912|myosin IB
mm9_v1_chr9_+_118972535_118972604	0.618278	HNF4A_NR2F1,2.p2	BC022664|Vill|22351|villin-like	AK166652|Vill|22351|villin-like
mm9_v1_chr19_+_53977788_53977896	0.616035	HNF4A_NR2F1,2.p2	NM_001168491|Pdcd4|18569|programmed cell death 4	NM_001168492|Pdcd4|18569|programmed cell death 4	AK172654|Pdcd4|18569|programmed cell death 4
mm9_v1_chr5_+_64203750_64203816	0.610994	HNF4A_NR2F1,2.p2	AK159779|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene	BC004797|0610040J01Rik|76261|RIKEN cDNA 0610040J01 gene
mm9_v1_chr10_-_126725826_126725958	0.61093	HNF4A_NR2F1,2.p2	BC059015|Mbd6|110962|methyl-CpG binding domain protein 6	NM_033072|Mbd6|110962|methyl-CpG binding domain protein 6	AK158797|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr11_-_69794736_69794753	0.609699	HNF4A_NR2F1,2.p2	AK152582|Rai12|54351|retinoic acid induced 12	NM_018740|Rai12|54351|retinoic acid induced 12	AK217337|Rai12|54351|retinoic acid induced 12
mm9_v1_chr3_+_67178016_67178018	0.608041	HNF4A_NR2F1,2.p2	AK007292|Mlf1|17349|myeloid leukemia factor 1	AK133448|Mlf1|17349|myeloid leukemia factor 1	NM_001039543|Mlf1|17349|myeloid leukemia factor 1	NM_010801|Mlf1|17349|myeloid leukemia factor 1
mm9_v1_chr3_+_14578746_14578772	0.606301	HNF4A_NR2F1,2.p2	AK156760|E2f5|13559|E2F transcription factor 5
mm9_v1_chr14_-_25065141_25065143	0.603316	HNF4A_NR2F1,2.p2	AK147699|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_001163513|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_027726|Dlg5|71228|discs, large homolog 5 (Drosophila)
mm9_v1_chr4_-_43038575_43038674	0.603055	HNF4A_NR2F1,2.p2	AK220315|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC141058|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	AB038560|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	NM_020035|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC092394|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	BC036977|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O	AK050819|Pigo|56703|phosphatidylinositol glycan anchor biosynthesis, class O
mm9_v1_chr2_-_164705231_164705295	0.602216	HNF4A_NR2F1,2.p2	BC037706|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene	AK142117|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene	AK015392|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene
mm9_v1_chr11_-_20731016_20731238	0.600881	HNF4A_NR2F1,2.p2	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr3_-_82707880_82707898	0.600544	HNF4A_NR2F1,2.p2	AF255061|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)	AK004953|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)	NM_023624|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
mm9_v1_chrX_-_13423666_13423727	0.600137	HNF4A_NR2F1,2.p2	NM_009806|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17137|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	Y17138|Cask|12361|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm9_v1_chr9_-_57315800_57315896	0.599612	HNF4A_NR2F1,2.p2	AF241833|Scamp5|56807|secretory carrier membrane protein 5	BC018613|Scamp5|56807|secretory carrier membrane protein 5	NM_020270|Scamp5|56807|secretory carrier membrane protein 5
mm9_v1_chr1_+_135206360_135206408	0.598478	HNF4A_NR2F1,2.p2	AY707855|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	BC024448|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK002581|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK141378|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	NM_026680|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)
mm9_v1_chr4_-_122638401_122638432	0.597176	HNF4A_NR2F1,2.p2	BC060526|Mfsd2a|76574|major facilitator superfamily domain containing 2A	BC046793|Mfsd2a|76574|major facilitator superfamily domain containing 2A	AK006096|Mfsd2a|76574|major facilitator superfamily domain containing 2A	NM_029662|Mfsd2a|76574|major facilitator superfamily domain containing 2A
mm9_v1_chr15_+_74785366_74785667	0.596867	HNF4A_NR2F1,2.p2	NM_001164037|Ly6e|17069|lymphocyte antigen 6 complex, locus E	NM_001164038|Ly6e|17069|lymphocyte antigen 6 complex, locus E	NM_001164039|Ly6e|17069|lymphocyte antigen 6 complex, locus E	NM_001164036|Ly6e|17069|lymphocyte antigen 6 complex, locus E	NM_008529|Ly6e|17069|lymphocyte antigen 6 complex, locus E	NM_001164040|Ly6e|17069|lymphocyte antigen 6 complex, locus E
mm9_v1_chr3_-_88265103_88265103	0.596786	HNF4A_NR2F1,2.p2	NM_001163489|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	X85991|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr4_+_155590035_155590043	0.596499	HNF4A_NR2F1,2.p2	AK036660|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene	NM_172417|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene	AK040833|2310042D19Rik|74183|RIKEN cDNA 2310042D19 gene
mm9_v1_chr11_+_116715041_116715362	0.595729	HNF4A_NR2F1,2.p2	BC100547|Mfsd11|69900|major facilitator superfamily domain containing 11	AK007898|Mfsd11|69900|major facilitator superfamily domain containing 11	AK032043|Mfsd11|69900|major facilitator superfamily domain containing 11	AK031384|Mfsd11|69900|major facilitator superfamily domain containing 11	BC079583|Mfsd11|69900|major facilitator superfamily domain containing 11	BC088988|Mfsd11|69900|major facilitator superfamily domain containing 11	NM_178620|Mfsd11|69900|major facilitator superfamily domain containing 11	BC145068|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137971|Mfsd11|69900|major facilitator superfamily domain containing 11	BC137970|Mfsd11|69900|major facilitator superfamily domain containing 11	BC016209|Mfsd11|69900|major facilitator superfamily domain containing 11	AF015191|Mfsd11|69900|major facilitator superfamily domain containing 11
mm9_v1_chr16_+_3884618_3884768	0.59425	HNF4A_NR2F1,2.p2	NM_029090|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK039910|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	BC004837|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK088736|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)	AK004750|Nat15|74763|N-acetyltransferase 15 (GCN5-related, putative)
mm9_v1_chr8_-_75016484_75016582	0.59422	HNF4A_NR2F1,2.p2	NM_177766|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr9_-_44495469_44495477	0.594013	HNF4A_NR2F1,2.p2	BC025451|Phldb1|102693|pleckstrin homology-like domain, family B, member 1
mm9_v1_chr8_-_124175827_124175832	0.593635	HNF4A_NR2F1,2.p2	BC132449|Zcchc14|142682|zinc finger, CCHC domain containing 14	BC137853|Zcchc14|142682|zinc finger, CCHC domain containing 14	AB030244|Zcchc14|142682|zinc finger, CCHC domain containing 14	NM_080855|Zcchc14|142682|zinc finger, CCHC domain containing 14
mm9_v1_chr14_-_21483775_21483797	0.593377	HNF4A_NR2F1,2.p2	AK084541|Synpo2l|68760|synaptopodin 2-like
mm9_v1_chrX_+_98644459_98644503	0.593033	HNF4A_NR2F1,2.p2	BC030035|Itgb1bp2|26549|integrin beta 1 binding protein 2	AF140691|Itgb1bp2|26549|integrin beta 1 binding protein 2
mm9_v1_chr9_-_100446544_100446556	0.592792	HNF4A_NR2F1,2.p2	AF043259|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr14_-_56332217_56332328	0.592154	HNF4A_NR2F1,2.p2	AF186373|Tgm1|21816|transglutaminase 1, K polypeptide	NM_001161714|Tgm1|21816|transglutaminase 1, K polypeptide	NM_001161715|Tgm1|21816|transglutaminase 1, K polypeptide
mm9_v1_chr5_+_115347505_115347613	0.591651	HNF4A_NR2F1,2.p2	BC034361|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AK157649|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AK010034|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AK150492|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr1_+_58859345_58859473	0.589251	HNF4A_NR2F1,2.p2	NM_001080126|Casp8|12370|caspase 8	AK153340|Casp8|12370|caspase 8
mm9_v1_chr6_-_59376283_59376287	0.589047	HNF4A_NR2F1,2.p2	AK050148|Gprin3|243385|GPRIN family member 3	NM_183183|Gprin3|243385|GPRIN family member 3	AK173336|Gprin3|243385|GPRIN family member 3
mm9_v1_chr2_-_25978328_25978339	0.587706	HNF4A_NR2F1,2.p2	AK147293|Nacc2|67991|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing	NM_026495|Nacc2|67991|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm9_v1_chr7_-_3617056_3617101	0.586193	HNF4A_NR2F1,2.p2	AK005095|Leng1|69757|leukocyte receptor cluster (LRC) member 1	AK037634|Leng1|69757|leukocyte receptor cluster (LRC) member 1
mm9_v1_chr9_-_107507732_107507851	0.582801	HNF4A_NR2F1,2.p2	NM_009153|Sema3b|20347|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	X85990|Sema3b|20347|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	AK014333|Sema3b|20347|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
mm9_v1_chr11_+_96902859_96902922	0.581337	HNF4A_NR2F1,2.p2	AK002865|Mrpl10|107732|mitochondrial ribosomal protein L10	NM_026154|Mrpl10|107732|mitochondrial ribosomal protein L10	AK078499|Mrpl10|107732|mitochondrial ribosomal protein L10	AK171028|Mrpl10|107732|mitochondrial ribosomal protein L10	AK007643|Mrpl10|107732|mitochondrial ribosomal protein L10	AK078463|Mrpl10|107732|mitochondrial ribosomal protein L10	AK150774|Mrpl10|107732|mitochondrial ribosomal protein L10	BC016219|Mrpl10|107732|mitochondrial ribosomal protein L10	AK141835|Mrpl10|107732|mitochondrial ribosomal protein L10
mm9_v1_chr14_+_99697896_99697918	0.580668	HNF4A_NR2F1,2.p2	AK051409|Klf5|12224|Kruppel-like factor 5	NM_009769|Klf5|12224|Kruppel-like factor 5	BC011307|Klf5|12224|Kruppel-like factor 5	BC012958|Klf5|12224|Kruppel-like factor 5
mm9_v1_chr6_-_124764313_124764396	0.579944	HNF4A_NR2F1,2.p2	NM_009415|Tpi1|21991|triosephosphate isomerase 1
mm9_v1_chr1_-_37776633_37776680	0.579196	HNF4A_NR2F1,2.p2	AK039052|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene	BC072639|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene	NM_028096|2010300C02Rik|72097|RIKEN cDNA 2010300C02 gene
mm9_v1_chr10_-_87819765_87819823	0.579108	HNF4A_NR2F1,2.p2	AK004552|Dram1|71712|DNA-damage regulated autophagy modulator 1	NM_027878|Dram1|71712|DNA-damage regulated autophagy modulator 1
mm9_v1_chr1_+_137647796_137647915	0.57779	HNF4A_NR2F1,2.p2	AK216299|Csrp1|13007|cysteine and glycine-rich protein 1	AK178295|Csrp1|13007|cysteine and glycine-rich protein 1	AK188439|Csrp1|13007|cysteine and glycine-rich protein 1	AK217070|Csrp1|13007|cysteine and glycine-rich protein 1
mm9_v1_chr2_+_155062268_155062350	0.576609	HNF4A_NR2F1,2.p2	NM_025947|Dynlrb1|67068|dynein light chain roadblock-type 1	AK166685|Dynlrb1|67068|dynein light chain roadblock-type 1	BC099423|Dynlrb1|67068|dynein light chain roadblock-type 1	AK008595|Dynlrb1|67068|dynein light chain roadblock-type 1	BC125610|Dynlrb1|67068|dynein light chain roadblock-type 1	BC125648|Dynlrb1|67068|dynein light chain roadblock-type 1	AK002359|Dynlrb1|67068|dynein light chain roadblock-type 1	AK003435|Dynlrb1|67068|dynein light chain roadblock-type 1
mm9_v1_chr4_-_138686896_138687027	0.576117	HNF4A_NR2F1,2.p2	AK008362|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK008449|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009189|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK011553|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK004466|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	BC055791|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK153063|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK167818|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK009528|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK152509|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK159100|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	AK030343|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene	NM_001163006|2310028O11Rik|433771|RIKEN cDNA 2310028O11 gene
mm9_v1_chr10_+_62892845_62892871	0.575087	HNF4A_NR2F1,2.p2	AK030166|Ctnna3|216033|catenin (cadherin associated protein), alpha 3	DQ380429|Ctnna3|216033|catenin (cadherin associated protein), alpha 3	NM_177612|Ctnna3|216033|catenin (cadherin associated protein), alpha 3	BC112409|Ctnna3|216033|catenin (cadherin associated protein), alpha 3
mm9_v1_chr4_-_129349948_129350020	0.573549	HNF4A_NR2F1,2.p2	AK084212|Kpna6|16650|karyopherin (importin) alpha 6	AK046371|Kpna6|16650|karyopherin (importin) alpha 6	AK154882|Kpna6|16650|karyopherin (importin) alpha 6	NM_008468|Kpna6|16650|karyopherin (importin) alpha 6
mm9_v1_chr5_+_43906796_43906826	0.572292	HNF4A_NR2F1,2.p2	AK017441|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	NM_001135172|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7	BC090967|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr5_-_67009869_67009948	0.571329	HNF4A_NR2F1,2.p2	BC076587|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2	AK169495|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2	AK004792|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_009686|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2	AK167649|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2	AK032770|Apbb2|11787|amyloid beta (A4) precursor protein-binding, family B, member 2
mm9_v1_chr7_+_28233013_28233084	0.570321	HNF4A_NR2F1,2.p2	BC006617|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))	AK153153|Blvrb|233016|biliverdin reductase B (flavin reductase (NADPH))
mm9_v1_chr11_+_102006824_102006826	0.560855	HNF4A_NR2F1,2.p2	BC036161|Nags|217214|N-acetylglutamate synthase
mm9_v1_chr11_+_120328948_120329054	0.556348	HNF4A_NR2F1,2.p2	NM_001159328|Hgs|15239|HGF-regulated tyrosine kinase substrate	NM_008244|Hgs|15239|HGF-regulated tyrosine kinase substrate	AK166441|Hgs|15239|HGF-regulated tyrosine kinase substrate	AK046299|Hgs|15239|HGF-regulated tyrosine kinase substrate	D50050|Hgs|15239|HGF-regulated tyrosine kinase substrate	BC003239|Hgs|15239|HGF-regulated tyrosine kinase substrate	AK145031|Hgs|15239|HGF-regulated tyrosine kinase substrate
mm9_v1_chr14_-_17407701_17408109	0.555685	HNF4A_NR2F1,2.p2	AK078471|Rarb|218772|retinoic acid receptor, beta	NM_011243|Rarb|218772|retinoic acid receptor, beta	S92180|Rarb|218772|retinoic acid receptor, beta	S56660|Rarb|218772|retinoic acid receptor, beta	AK054178|Rarb|218772|retinoic acid receptor, beta	BC076597|Rarb|218772|retinoic acid receptor, beta	X56573|Rarb|218772|retinoic acid receptor, beta
mm9_v1_chr8_+_122516412_122516427	0.554795	HNF4A_NR2F1,2.p2	AK149909|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK149925|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK150180|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2	AK132171|Crispld2|78892|cysteine-rich secretory protein LCCL domain containing 2
mm9_v1_chrX_-_106208659_106208718	0.554742	HNF4A_NR2F1,2.p2	BC021626|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AB018374|Hmgn5|50887|high-mobility group nucleosome binding domain 5	BC083087|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK131996|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AK146755|Hmgn5|50887|high-mobility group nucleosome binding domain 5	AF213454|Hmgn5|50887|high-mobility group nucleosome binding domain 5	NM_016710|Hmgn5|50887|high-mobility group nucleosome binding domain 5
mm9_v1_chr5_+_136259172_136259218	0.554282	HNF4A_NR2F1,2.p2	DQ402950|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)
mm9_v1_chr19_+_18824472_18824480	0.551386	HNF4A_NR2F1,2.p2	AY135644|Trpm6|225997|transient receptor potential cation channel, subfamily M, member 6	NM_153417|Trpm6|225997|transient receptor potential cation channel, subfamily M, member 6	BC145223|Trpm6|225997|transient receptor potential cation channel, subfamily M, member 6
mm9_v1_chr7_+_52112520_52112725	0.548944	HNF4A_NR2F1,2.p2	AK160160|Pnkp|59047|polynucleotide kinase 3'- phosphatase	NM_021549|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC047269|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK049992|Pnkp|59047|polynucleotide kinase 3'- phosphatase	AK172558|Pnkp|59047|polynucleotide kinase 3'- phosphatase	BC057659|Pnkp|59047|polynucleotide kinase 3'- phosphatase
mm9_v1_chr6_+_124989841_124989878	0.548374	HNF4A_NR2F1,2.p2	AK046126|Ing4|28019|inhibitor of growth family, member 4	AK050522|Ing4|28019|inhibitor of growth family, member 4	AK031633|Ing4|28019|inhibitor of growth family, member 4	AK002821|Ing4|28019|inhibitor of growth family, member 4	AK009267|Ing4|28019|inhibitor of growth family, member 4	NM_133345|Ing4|28019|inhibitor of growth family, member 4	BC009127|Ing4|28019|inhibitor of growth family, member 4	AY035880|Ing4|28019|inhibitor of growth family, member 4	AY035881|Ing4|28019|inhibitor of growth family, member 4	AY036107|Ing4|28019|inhibitor of growth family, member 4
mm9_v1_chr19_+_9016335_9016460	0.546428	HNF4A_NR2F1,2.p2	AK149834|Mta2|23942|metastasis-associated gene family, member 2	BC079847|Mta2|23942|metastasis-associated gene family, member 2	NM_011842|Mta2|23942|metastasis-associated gene family, member 2	AK077548|Mta2|23942|metastasis-associated gene family, member 2	AK147099|Mta2|23942|metastasis-associated gene family, member 2	AK159979|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr14_+_73952438_73952612	0.545165	HNF4A_NR2F1,2.p2	AK016060|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK081965|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK088801|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK150594|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK152783|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK160130|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	NM_011506|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK153198|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	BC056353|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	BC057605|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK132762|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK160652|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit	AK005273|Sucla2|20916|succinate-Coenzyme A ligase, ADP-forming, beta subunit
mm9_v1_chr9_-_42208011_42208011	0.538516	HNF4A_NR2F1,2.p2	NM_009347|Tecta|21683|tectorin alpha	X99805|Tecta|21683|tectorin alpha
mm9_v1_chr8_-_74967581_74967676	0.538377	HNF4A_NR2F1,2.p2	AB206786|Calr3|73316|calreticulin 3	AK006582|Calr3|73316|calreticulin 3	NM_028500|Calr3|73316|calreticulin 3
mm9_v1_chr5_-_130354822_130354958	0.536677	HNF4A_NR2F1,2.p2	J03293|Phkg1|18682|phosphorylase kinase gamma 1	BC055102|Phkg1|18682|phosphorylase kinase gamma 1	NM_011079|Phkg1|18682|phosphorylase kinase gamma 1	AK079361|Phkg1|18682|phosphorylase kinase gamma 1
mm9_v1_chr7_+_117911625_117911719	0.534547	HNF4A_NR2F1,2.p2	D85596|Ampd3|11717|adenosine monophosphate deaminase 3
mm9_v1_chr19_+_8922192_8922195	0.532815	HNF4A_NR2F1,2.p2	AK179965|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr5_+_147042806_147042851	0.530335	HNF4A_NR2F1,2.p2	AK131948|Cdk8|264064|cyclin-dependent kinase 8
mm9_v1_chr8_+_87604829_87604904	0.530323	HNF4A_NR2F1,2.p2	AK010893|BC056474|414077|cDNA sequence BC056474	BC089623|BC056474|414077|cDNA sequence BC056474	NM_001001493|BC056474|414077|cDNA sequence BC056474	BC024937|BC056474|414077|cDNA sequence BC056474	BC091742|BC056474|414077|cDNA sequence BC056474	BC056474|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr14_-_122138082_122138150	0.52978	HNF4A_NR2F1,2.p2	BC158050|Dock9|105445|dedicator of cytokinesis 9	AK122431|Dock9|105445|dedicator of cytokinesis 9	NM_001128307|Dock9|105445|dedicator of cytokinesis 9	NM_001128308|Dock9|105445|dedicator of cytokinesis 9
mm9_v1_chr6_+_112409498_112409498	0.529002	HNF4A_NR2F1,2.p2	BC024383|Cav3|12391|caveolin 3	NM_007617|Cav3|12391|caveolin 3
mm9_v1_chr4_-_127006368_127006404	0.527363	HNF4A_NR2F1,2.p2	NM_008126|Gjb3|14620|gap junction protein, beta 3	X63099|Gjb3|14620|gap junction protein, beta 3
mm9_v1_chr1_+_171899520_171899582	0.525523	HNF4A_NR2F1,2.p2	AK014177|3110045C21Rik|67303|RIKEN cDNA 3110045C21 gene	AK014032|3110045C21Rik|67303|RIKEN cDNA 3110045C21 gene
mm9_v1_chr11_-_8948907_8948993	0.525195	HNF4A_NR2F1,2.p2	BC109334|Sun3|194974|Sad1 and UNC84 domain containing 3	AK052771|Sun3|194974|Sad1 and UNC84 domain containing 3	NM_177576|Sun3|194974|Sad1 and UNC84 domain containing 3
mm9_v1_chr2_+_164705533_164705558	0.524447	HNF4A_NR2F1,2.p2	
mm9_v1_chr7_+_51827801_51827942	0.523958	HNF4A_NR2F1,2.p2	AB038144|Napsa|16541|napsin A aspartic peptidase	D88899|Napsa|16541|napsin A aspartic peptidase	NM_008437|Napsa|16541|napsin A aspartic peptidase
mm9_v1_chr6_+_48543879_48544012	0.520783	HNF4A_NR2F1,2.p2	NM_001079901|Repin1|58887|replication initiator 1	NM_001079902|Repin1|58887|replication initiator 1	NM_001079903|Repin1|58887|replication initiator 1	NM_001079904|Repin1|58887|replication initiator 1	NM_001079905|Repin1|58887|replication initiator 1	NM_175099|Repin1|58887|replication initiator 1	AK170797|Repin1|58887|replication initiator 1	BC092301|Repin1|58887|replication initiator 1	AK089041|Repin1|58887|replication initiator 1	AK137310|Repin1|58887|replication initiator 1	BC085128|Repin1|58887|replication initiator 1
mm9_v1_chr1_-_174012771_174012895	0.520125	HNF4A_NR2F1,2.p2	AK033314|Ncstn|59287|nicastrin	AK170173|Ncstn|59287|nicastrin	AK172579|Ncstn|59287|nicastrin	BC019998|Ncstn|59287|nicastrin	AF240469|Ncstn|59287|nicastrin	AK170244|Ncstn|59287|nicastrin	AK170369|Ncstn|59287|nicastrin	AK129102|Ncstn|59287|nicastrin	NM_021607|Ncstn|59287|nicastrin
mm9_v1_chr2_-_115890747_115890848	0.518419	HNF4A_NR2F1,2.p2	U68383|Meis2|17536|Meis homeobox 2	U68384|Meis2|17536|Meis homeobox 2	AJ000504|Meis2|17536|Meis homeobox 2	AJ000505|Meis2|17536|Meis homeobox 2	AJ000506|Meis2|17536|Meis homeobox 2	AJ000507|Meis2|17536|Meis homeobox 2	AK146633|Meis2|17536|Meis homeobox 2	NM_001136072|Meis2|17536|Meis homeobox 2	NM_001159567|Meis2|17536|Meis homeobox 2	NM_001159568|Meis2|17536|Meis homeobox 2	NM_010825|Meis2|17536|Meis homeobox 2	BC017375|Meis2|17536|Meis homeobox 2
mm9_v1_chr5_+_88994019_88994105	0.513872	HNF4A_NR2F1,2.p2	AK154941|Rufy3|52822|RUN and FYVE domain containing 3	AK160820|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr19_+_42126717_42126740	0.512847	HNF4A_NR2F1,2.p2	NM_025752|4933411K16Rik|66765|RIKEN cDNA 4933411K16 gene	AK016775|4933411K16Rik|66765|RIKEN cDNA 4933411K16 gene	AK006374|4933411K16Rik|66765|RIKEN cDNA 4933411K16 gene	BC049703|4933411K16Rik|66765|RIKEN cDNA 4933411K16 gene
mm9_v1_chr11_+_98821723_98821747	0.512223	HNF4A_NR2F1,2.p2	BC038266|Rara|19401|retinoic acid receptor, alpha
mm9_v1_chr5_-_87355527_87355556	0.511605	HNF4A_NR2F1,2.p2	BC027200|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	NM_152811|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK004971|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1	AK050435|Ugt2b1|71773|UDP glucuronosyltransferase 2 family, polypeptide B1
mm9_v1_chr10_-_75931585_75931614	0.510974	HNF4A_NR2F1,2.p2	AK037727|Ybey|216119|ybeY metallopeptidase	AK051909|Ybey|216119|ybeY metallopeptidase	AK136543|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr2_+_174167172_174167173	0.509161	HNF4A_NR2F1,2.p2	BC048834|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr7_-_118125571_118125608	0.507509	HNF4A_NR2F1,2.p2	AK020536|Mrvi1|17540|MRV integration site 1	AK157169|Mrvi1|17540|MRV integration site 1	NM_194464|Mrvi1|17540|MRV integration site 1
mm9_v1_chrX_+_33868347_33868594	0.506769	HNF4A_NR2F1,2.p2	AK167341|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK016522|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK147751|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	NM_028894|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120688|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120690|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK030866|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3
mm9_v1_chr3_+_89222501_89222609	0.505258	HNF4A_NR2F1,2.p2	AK049357|Shc1|20416|src homology 2 domain-containing transforming protein C1	BC036172|Shc1|20416|src homology 2 domain-containing transforming protein C1	U15784|Shc1|20416|src homology 2 domain-containing transforming protein C1
mm9_v1_chr4_-_116323979_116324063	0.50455	HNF4A_NR2F1,2.p2	AK128906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK186333|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK192030|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK210646|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK219186|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK009462|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC003850|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr14_-_56331924_56331924	0.503556	HNF4A_NR2F1,2.p2	BC026422|Tgm1|21816|transglutaminase 1, K polypeptide	NM_019984|Tgm1|21816|transglutaminase 1, K polypeptide
mm9_v1_chr14_+_55050530_55050726	0.503278	HNF4A_NR2F1,2.p2	X83536|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK149988|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	DQ249870|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)	AK198018|Mmp14|17387|matrix metallopeptidase 14 (membrane-inserted)
mm9_v1_chr7_-_20408100_20408121	0.502891	HNF4A_NR2F1,2.p2	NM_033601|Bcl3|12051|B-cell leukemia/lymphoma 3
mm9_v1_chr12_+_113960530_113960572	0.501217	HNF4A_NR2F1,2.p2	BC050077|AW555464|217882|expressed sequence AW555464
mm9_v1_chr9_-_100446444_100446539	0.500345	HNF4A_NR2F1,2.p2	BC002015|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	NM_010878|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK051854|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr17_-_80295336_80295462	0.497952	HNF4A_NR2F1,2.p2	AK135988|Atl2|56298|atlastin GTPase 2	BC060501|Atl2|56298|atlastin GTPase 2	NM_019717|Atl2|56298|atlastin GTPase 2	AK038697|Atl2|56298|atlastin GTPase 2	AK043907|Atl2|56298|atlastin GTPase 2	AK008381|Atl2|56298|atlastin GTPase 2	NM_178050|Atl2|56298|atlastin GTPase 2
mm9_v1_chr7_+_151016088_151016155	0.49648	HNF4A_NR2F1,2.p2	AF057368|Dhcr7|13360|7-dehydrocholesterol reductase	AK146811|Dhcr7|13360|7-dehydrocholesterol reductase	BC006854|Dhcr7|13360|7-dehydrocholesterol reductase
mm9_v1_chr2_-_51816123_51816173	0.496336	HNF4A_NR2F1,2.p2	CT010361|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr15_+_103129767_103129829	0.496268	HNF4A_NR2F1,2.p2	
mm9_v1_chr3_-_129763732_129763824	0.495974	HNF4A_NR2F1,2.p2	BC046776|Sec24b|99683|Sec24 related gene family, member B (S. cerevisiae)	NM_207209|Sec24b|99683|Sec24 related gene family, member B (S. cerevisiae)
mm9_v1_chr13_-_55932777_55932785	0.495456	HNF4A_NR2F1,2.p2	NM_011097|Pitx1|18740|paired-like homeodomain transcription factor 1	U71206|Pitx1|18740|paired-like homeodomain transcription factor 1
mm9_v1_chr6_-_50516456_50516542	0.492979	HNF4A_NR2F1,2.p2	BC034363|Cycs|13063|cytochrome c, somatic	BC094054|Cycs|13063|cytochrome c, somatic	AK088098|Cycs|13063|cytochrome c, somatic	AK143887|Cycs|13063|cytochrome c, somatic	NM_007808|Cycs|13063|cytochrome c, somatic	AK002732|Cycs|13063|cytochrome c, somatic	AK168017|Cycs|13063|cytochrome c, somatic	AK010651|Cycs|13063|cytochrome c, somatic	AK003168|Cycs|13063|cytochrome c, somatic	AK005336|Cycs|13063|cytochrome c, somatic
mm9_v1_chr6_-_37391993_37392195	0.489937	HNF4A_NR2F1,2.p2	BC138470|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	BC138471|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	BC043466|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK041050|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK035695|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK036712|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK042418|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	AK041669|Creb3l2|208647|cAMP responsive element binding protein 3-like 2	NM_178661|Creb3l2|208647|cAMP responsive element binding protein 3-like 2
mm9_v1_chr8_+_125778094_125778211	0.489654	HNF4A_NR2F1,2.p2	AK133363|Zfp276|57247|zinc finger protein (C2H2 type) 276	NM_020497|Zfp276|57247|zinc finger protein (C2H2 type) 276	AK028939|Zfp276|57247|zinc finger protein (C2H2 type) 276	AK043258|Zfp276|57247|zinc finger protein (C2H2 type) 276	BC066056|Zfp276|57247|zinc finger protein (C2H2 type) 276
mm9_v1_chr10_-_77734341_77734501	0.487174	HNF4A_NR2F1,2.p2	
mm9_v1_chr2_+_32484995_32485061	0.487064	HNF4A_NR2F1,2.p2	NM_021515|Ak1|11636|adenylate kinase 1	AJ010109|Ak1|11636|adenylate kinase 1	BC054366|Ak1|11636|adenylate kinase 1
mm9_v1_chr1_+_36568707_36568722	0.486213	HNF4A_NR2F1,2.p2	NM_001039551|Cnnm3|94218|cyclin M3	NM_053186|Cnnm3|94218|cyclin M3
mm9_v1_chr11_-_86570918_86571097	0.485786	HNF4A_NR2F1,2.p2	AK158438|Cltc|67300|clathrin, heavy polypeptide (Hc)	BC079897|Cltc|67300|clathrin, heavy polypeptide (Hc)	NM_001003908|Cltc|67300|clathrin, heavy polypeptide (Hc)	AK171732|Cltc|67300|clathrin, heavy polypeptide (Hc)	AK156869|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr2_+_59450080_59450110	0.48519	HNF4A_NR2F1,2.p2	NM_198294|Tanc1|66860|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm9_v1_chr4_+_137549366_137549416	0.485119	HNF4A_NR2F1,2.p2	AK019693|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	AK054068|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	BC072600|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	NM_172703|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	AK046639|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	BC082549|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	BC079885|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3
mm9_v1_chr17_+_25033425_25033488	0.483933	HNF4A_NR2F1,2.p2	AK007399|Nme3|79059|non-metastatic cells 3, protein expressed in	NM_019730|Nme3|79059|non-metastatic cells 3, protein expressed in	AF153449|Nme3|79059|non-metastatic cells 3, protein expressed in	AF288689|Nme3|79059|non-metastatic cells 3, protein expressed in	BC028503|Nme3|79059|non-metastatic cells 3, protein expressed in	AK002525|Nme3|79059|non-metastatic cells 3, protein expressed in
mm9_v1_chr6_+_17231207_17231331	0.483162	HNF4A_NR2F1,2.p2	AK158419|Cav2|12390|caveolin 2	AF141322|Cav2|12390|caveolin 2	AK004663|Cav2|12390|caveolin 2	AB049604|Cav2|12390|caveolin 2	AB049605|Cav2|12390|caveolin 2
mm9_v1_chr3_-_151500395_151500491	0.481862	HNF4A_NR2F1,2.p2	AK087833|Ptgfr|19220|prostaglandin F receptor	D17433|Ptgfr|19220|prostaglandin F receptor	BC064794|Ptgfr|19220|prostaglandin F receptor	AK141760|Ptgfr|19220|prostaglandin F receptor	AK076450|Ptgfr|19220|prostaglandin F receptor	NM_008966|Ptgfr|19220|prostaglandin F receptor
mm9_v1_chr5_-_31350374_31350626	0.479762	HNF4A_NR2F1,2.p2	AK161633|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	NM_177870|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	AK088682|Slc5a6|330064|solute carrier family 5 (sodium-dependent vitamin transporter), member 6
mm9_v1_chr14_-_31423487_31423497	0.479757	HNF4A_NR2F1,2.p2	AB011812|Prkcd|18753|protein kinase C, delta	AF251036|Prkcd|18753|protein kinase C, delta	AY545076|Prkcd|18753|protein kinase C, delta	NM_011103|Prkcd|18753|protein kinase C, delta	X60304|Prkcd|18753|protein kinase C, delta
mm9_v1_chr15_+_75771566_75771616	0.478635	HNF4A_NR2F1,2.p2	AK028561|Zfp623|78834|zinc finger protein 623
mm9_v1_chr17_-_46841851_46841924	0.476887	HNF4A_NR2F1,2.p2	BC010716|Ppp2r5d|21770|protein phosphatase 2, regulatory subunit B (B56), delta isoform	AY338234|Ppp2r5d|21770|protein phosphatase 2, regulatory subunit B (B56), delta isoform	AK160587|Ppp2r5d|21770|protein phosphatase 2, regulatory subunit B (B56), delta isoform	AB053464|Ppp2r5d|21770|protein phosphatase 2, regulatory subunit B (B56), delta isoform
mm9_v1_chr7_+_97591618_97591648	0.476791	HNF4A_NR2F1,2.p2	AF408398|Crebzf|233490|CREB/ATF bZIP transcription factor
mm9_v1_chr19_-_7369859_7369936	0.474969	HNF4A_NR2F1,2.p2	AK172664|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080390|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK154864|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr15_-_98398066_98398161	0.474008	HNF4A_NR2F1,2.p2	AF087662|Ccnt1|12455|cyclin T1	AF095640|Ccnt1|12455|cyclin T1	AF109179|Ccnt1|12455|cyclin T1	AF113951|Ccnt1|12455|cyclin T1	BC131685|Ccnt1|12455|cyclin T1	BC131686|Ccnt1|12455|cyclin T1	NM_009833|Ccnt1|12455|cyclin T1	AK083037|Ccnt1|12455|cyclin T1
mm9_v1_chr11_+_77992224_77992267	0.474004	HNF4A_NR2F1,2.p2	AK002265|Tlcd1|68385|TLC domain containing 1	AK161721|Tlcd1|68385|TLC domain containing 1	AK002703|Tlcd1|68385|TLC domain containing 1	BC005702|Tlcd1|68385|TLC domain containing 1	NM_026708|Tlcd1|68385|TLC domain containing 1
mm9_v1_chr16_-_58523400_58523488	0.472961	HNF4A_NR2F1,2.p2	AF119390|St3gal6|54613|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	NM_018784|St3gal6|54613|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	AK041173|St3gal6|54613|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	AK048950|St3gal6|54613|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm9_v1_chr7_-_52271450_52271636	0.471974	HNF4A_NR2F1,2.p2	BC042576|Scaf1|233208|SR-related CTD-associated factor 1	AK141920|Scaf1|233208|SR-related CTD-associated factor 1	BC085153|Scaf1|233208|SR-related CTD-associated factor 1	NM_001008422|Scaf1|233208|SR-related CTD-associated factor 1	BC079873|Scaf1|233208|SR-related CTD-associated factor 1
mm9_v1_chr7_+_38968802_38968906	0.471763	HNF4A_NR2F1,2.p2	NM_028166|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK146474|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK005449|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK032342|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	AK032135|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	BC010476|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	BC085480|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	BC092099|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene
mm9_v1_chr7_+_86418127_86418181	0.471329	HNF4A_NR2F1,2.p2	AK008690|Abhd2|54608|abhydrolase domain containing 2	AK053460|Abhd2|54608|abhydrolase domain containing 2	AK139526|Abhd2|54608|abhydrolase domain containing 2	NM_018811|Abhd2|54608|abhydrolase domain containing 2	AF546701|Abhd2|54608|abhydrolase domain containing 2	BC089477|Abhd2|54608|abhydrolase domain containing 2	AF201730|Abhd2|54608|abhydrolase domain containing 2	BC027098|Abhd2|54608|abhydrolase domain containing 2
mm9_v1_chr13_+_42147389_42147402	0.468117	HNF4A_NR2F1,2.p2	AK039808|Hivep1|110521|human immunodeficiency virus type I enhancer binding protein 1	NM_007772|Hivep1|110521|human immunodeficiency virus type I enhancer binding protein 1
mm9_v1_chr14_-_17075814_17075844	0.466028	HNF4A_NR2F1,2.p2	BC118051|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	BC119793|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	AK034243|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial	AK084829|Oxsm|71147|3-oxoacyl-ACP synthase, mitochondrial
mm9_v1_chr7_-_134028480_134028480	0.46577	HNF4A_NR2F1,2.p2	NM_001163774|Taok2|381921|TAO kinase 2	NM_001163775|Taok2|381921|TAO kinase 2
mm9_v1_chr11_-_101026399_101026436	0.464165	HNF4A_NR2F1,2.p2	AK052371|Plekhh3|217198|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm9_v1_chr18_+_36446680_36446818	0.464099	HNF4A_NR2F1,2.p2	AF017631|Pura|19290|purine rich element binding protein A
mm9_v1_chr10_+_80092400_80092421	0.462081	HNF4A_NR2F1,2.p2	AK132871|Csnk1g2|103236|casein kinase 1, gamma 2	NM_001159591|Csnk1g2|103236|casein kinase 1, gamma 2	AK077076|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chrX_-_50723622_50723678	0.46185	HNF4A_NR2F1,2.p2	BC100442|Mospd1|70380|motile sperm domain containing 1	BC018329|Mospd1|70380|motile sperm domain containing 1	BC085100|Mospd1|70380|motile sperm domain containing 1	AK007533|Mospd1|70380|motile sperm domain containing 1	NM_027409|Mospd1|70380|motile sperm domain containing 1	AK088275|Mospd1|70380|motile sperm domain containing 1	AK139795|Mospd1|70380|motile sperm domain containing 1
mm9_v1_chr2_+_3035692_3035956	0.461649	HNF4A_NR2F1,2.p2	BC138175|Fam171a1|269233|family with sequence similarity 171, member A1	BC145171|Fam171a1|269233|family with sequence similarity 171, member A1	AK077831|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr9_+_50425460_50425487	0.460264	HNF4A_NR2F1,2.p2	BC019481|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr8_-_87549120_87549191	0.459471	HNF4A_NR2F1,2.p2	BC016453|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	BC083335|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AF039405|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	NM_019652|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK007827|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)	AK171690|Asna1|56495|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
mm9_v1_chr9_-_50817077_50817177	0.458942	HNF4A_NR2F1,2.p2	AB067780|Sik2|235344|salt inducible kinase 2	AK090386|Sik2|235344|salt inducible kinase 2	AK028526|Sik2|235344|salt inducible kinase 2	AK041032|Sik2|235344|salt inducible kinase 2	NM_178710|Sik2|235344|salt inducible kinase 2
mm9_v1_chr9_-_119846611_119846675	0.458265	HNF4A_NR2F1,2.p2	AK170627|Gorasp1|74498|golgi reassembly stacking protein 1	AK154986|Gorasp1|74498|golgi reassembly stacking protein 1	BC012251|Gorasp1|74498|golgi reassembly stacking protein 1	NM_028976|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr4_-_41587115_41587160	0.45788	HNF4A_NR2F1,2.p2	AK050496|Enho|69638|energy homeostasis associated
mm9_v1_chrX_-_71269083_71269215	0.451254	HNF4A_NR2F1,2.p2	U56773|Irak1|16179|interleukin-1 receptor-associated kinase 1	AB088370|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK045958|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK052933|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK144879|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK143694|Irak1|16179|interleukin-1 receptor-associated kinase 1
mm9_v1_chr17_-_56766191_56766343	0.449626	HNF4A_NR2F1,2.p2	AY190302|Lonp1|74142|lon peptidase 1, mitochondrial	BC057365|Lonp1|74142|lon peptidase 1, mitochondrial	BC058735|Lonp1|74142|lon peptidase 1, mitochondrial	AK157474|Lonp1|74142|lon peptidase 1, mitochondrial	AK004820|Lonp1|74142|lon peptidase 1, mitochondrial	AK131910|Lonp1|74142|lon peptidase 1, mitochondrial	AK159302|Lonp1|74142|lon peptidase 1, mitochondrial	AK160071|Lonp1|74142|lon peptidase 1, mitochondrial	AK160076|Lonp1|74142|lon peptidase 1, mitochondrial	AK161983|Lonp1|74142|lon peptidase 1, mitochondrial	NM_028782|Lonp1|74142|lon peptidase 1, mitochondrial
mm9_v1_chr3_-_143865162_143865359	0.446582	HNF4A_NR2F1,2.p2	BC003488|Lmo4|16911|LIM domain only 4	BC100382|Lmo4|16911|LIM domain only 4	AF102817|Lmo4|16911|LIM domain only 4	AK138278|Lmo4|16911|LIM domain only 4	NM_001161770|Lmo4|16911|LIM domain only 4	NM_001161769|Lmo4|16911|LIM domain only 4
mm9_v1_chr3_-_94812818_94812845	0.446582	HNF4A_NR2F1,2.p2	BC039950|Zfp687|78266|zinc finger protein 687	BC036979|Zfp687|78266|zinc finger protein 687
mm9_v1_chr19_-_36763823_36763968	0.442809	HNF4A_NR2F1,2.p2	AK142254|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene
mm9_v1_chr18_-_36904173_36904177	0.441327	HNF4A_NR2F1,2.p2	AK018732|Ndufa2|17991|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2
mm9_v1_chr9_-_42280256_42280323	0.44068	HNF4A_NR2F1,2.p2	BC139386|Tbcel|272589|tubulin folding cofactor E-like	BC139387|Tbcel|272589|tubulin folding cofactor E-like	AK077017|Tbcel|272589|tubulin folding cofactor E-like	NM_173038|Tbcel|272589|tubulin folding cofactor E-like	AK084854|Tbcel|272589|tubulin folding cofactor E-like
mm9_v1_chr7_-_97605681_97605720	0.439689	HNF4A_NR2F1,2.p2	BC023171|Tmem126a|66271|transmembrane protein 126A	AK005343|Tmem126a|66271|transmembrane protein 126A	AK050267|Tmem126a|66271|transmembrane protein 126A	AK007559|Tmem126a|66271|transmembrane protein 126A	NM_025460|Tmem126a|66271|transmembrane protein 126A
mm9_v1_chr2_+_151931465_151931476	0.436764	HNF4A_NR2F1,2.p2	AK089976|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	AK159226|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	NM_029688|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	AK159613|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	AK007296|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_55144949_55145013	0.436382	HNF4A_NR2F1,2.p2	NM_008303|Hspe1|15528|heat shock protein 1 (chaperonin 10)
mm9_v1_chr2_-_167469448_167469594	0.436104	HNF4A_NR2F1,2.p2	AK188596|Tmem189|407243|transmembrane protein 189	AK197639|Tmem189|407243|transmembrane protein 189
mm9_v1_chr11_-_60040448_60040491	0.435512	HNF4A_NR2F1,2.p2	AK013538|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr5_-_143668369_143668395	0.431383	HNF4A_NR2F1,2.p2	BC138611|Actb|11461|actin, beta	BC138614|Actb|11461|actin, beta	AK179836|Actb|11461|actin, beta	AK180740|Actb|11461|actin, beta	AK180898|Actb|11461|actin, beta	AK184086|Actb|11461|actin, beta	AK184228|Actb|11461|actin, beta	AK187727|Actb|11461|actin, beta	J04181|Actb|11461|actin, beta
mm9_v1_chr19_-_5424751_5424826	0.431208	HNF4A_NR2F1,2.p2	AK087456|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)	AK154251|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm9_v1_chr14_+_67853597_67853948	0.430627	HNF4A_NR2F1,2.p2	U92703|Ebf2|13592|early B-cell factor 2	BC049188|Ebf2|13592|early B-cell factor 2	U71189|Ebf2|13592|early B-cell factor 2	U82441|Ebf2|13592|early B-cell factor 2
mm9_v1_chr16_+_17509040_17509094	0.430508	HNF4A_NR2F1,2.p2	AK083411|Lztr1|66863|leucine-zipper-like transcriptional regulator, 1	AK004561|Lztr1|66863|leucine-zipper-like transcriptional regulator, 1	NM_025808|Lztr1|66863|leucine-zipper-like transcriptional regulator, 1	AK005037|Lztr1|66863|leucine-zipper-like transcriptional regulator, 1	AK132817|Lztr1|66863|leucine-zipper-like transcriptional regulator, 1	BC034400|Lztr1|66863|leucine-zipper-like transcriptional regulator, 1
mm9_v1_chr11_+_49944855_49944942	0.430448	HNF4A_NR2F1,2.p2	NM_029745|Tbc1d9b|76795|TBC1 domain family, member 9B	BC062928|Tbc1d9b|76795|TBC1 domain family, member 9B	AK166472|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065080|Tbc1d9b|76795|TBC1 domain family, member 9B	AK035457|Tbc1d9b|76795|TBC1 domain family, member 9B	AK147964|Tbc1d9b|76795|TBC1 domain family, member 9B	AK049999|Tbc1d9b|76795|TBC1 domain family, member 9B	BC065130|Tbc1d9b|76795|TBC1 domain family, member 9B	AK172999|Tbc1d9b|76795|TBC1 domain family, member 9B
mm9_v1_chr7_-_149562239_149562649	0.427451	HNF4A_NR2F1,2.p2	AK180828|Ctsd|13033|cathepsin D	AK183526|Ctsd|13033|cathepsin D
mm9_v1_chr5_+_130695613_130695613	0.427448	HNF4A_NR2F1,2.p2	NM_001081394|0610007L01Rik|71667|RIKEN cDNA 0610007L01 gene
mm9_v1_chr10_-_87819740_87819750	0.427157	HNF4A_NR2F1,2.p2	BC021433|Dram1|71712|DNA-damage regulated autophagy modulator 1	AK151184|Dram1|71712|DNA-damage regulated autophagy modulator 1
mm9_v1_chr11_-_90548862_90548939	0.42694	HNF4A_NR2F1,2.p2	AK181527|Tom1l1|71943|target of myb1-like 1 (chicken)	AJ505007|Tom1l1|71943|target of myb1-like 1 (chicken)	AK009826|Tom1l1|71943|target of myb1-like 1 (chicken)	AK083630|Tom1l1|71943|target of myb1-like 1 (chicken)	AF395837|Tom1l1|71943|target of myb1-like 1 (chicken)	AK033712|Tom1l1|71943|target of myb1-like 1 (chicken)	NM_028011|Tom1l1|71943|target of myb1-like 1 (chicken)
mm9_v1_chr4_+_116924633_116924654	0.426846	HNF4A_NR2F1,2.p2	BC019937|Tmem53|68777|transmembrane protein 53	BC020121|Tmem53|68777|transmembrane protein 53	AK005104|Tmem53|68777|transmembrane protein 53
mm9_v1_chr11_+_32646291_32646504	0.42505	HNF4A_NR2F1,2.p2	AK207541|Fbxw11|103583|F-box and WD-40 domain protein 11	AK219433|Fbxw11|103583|F-box and WD-40 domain protein 11	AK216067|Fbxw11|103583|F-box and WD-40 domain protein 11	AK210303|Fbxw11|103583|F-box and WD-40 domain protein 11	AK213659|Fbxw11|103583|F-box and WD-40 domain protein 11	AK215208|Fbxw11|103583|F-box and WD-40 domain protein 11
mm9_v1_chr9_+_108410335_108410519	0.423194	HNF4A_NR2F1,2.p2	NM_133794|Qars|97541|glutaminyl-tRNA synthetase	AK145632|Qars|97541|glutaminyl-tRNA synthetase	AK155759|Qars|97541|glutaminyl-tRNA synthetase	AK161817|Qars|97541|glutaminyl-tRNA synthetase	AK163863|Qars|97541|glutaminyl-tRNA synthetase	AK170826|Qars|97541|glutaminyl-tRNA synthetase	AK171293|Qars|97541|glutaminyl-tRNA synthetase	AK030554|Qars|97541|glutaminyl-tRNA synthetase	AK088049|Qars|97541|glutaminyl-tRNA synthetase	AK165454|Qars|97541|glutaminyl-tRNA synthetase	AK167782|Qars|97541|glutaminyl-tRNA synthetase	AK004814|Qars|97541|glutaminyl-tRNA synthetase	BC079854|Qars|97541|glutaminyl-tRNA synthetase	AK180680|Qars|97541|glutaminyl-tRNA synthetase
mm9_v1_chr10_+_122116022_122116053	0.422626	HNF4A_NR2F1,2.p2	
mm9_v1_chr14_+_58445584_58445682	0.420269	HNF4A_NR2F1,2.p2	AK212819|Mrp63|67840|mitochondrial ribosomal protein 63
mm9_v1_chr7_-_4453210_4453293	0.420192	HNF4A_NR2F1,2.p2	AK144521|Ppp1r12c|232807|protein phosphatase 1, regulatory (inhibitor) subunit 12C	AK046570|Ppp1r12c|232807|protein phosphatase 1, regulatory (inhibitor) subunit 12C	AK010836|Ppp1r12c|232807|protein phosphatase 1, regulatory (inhibitor) subunit 12C	AK144691|Ppp1r12c|232807|protein phosphatase 1, regulatory (inhibitor) subunit 12C	NM_029834|Ppp1r12c|232807|protein phosphatase 1, regulatory (inhibitor) subunit 12C
mm9_v1_chr6_-_72309822_72309877	0.419222	HNF4A_NR2F1,2.p2	
mm9_v1_chr8_-_125777949_125778247	0.418514	HNF4A_NR2F1,2.p2	AK051715|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AK154409|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AK155433|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AK010402|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AK005046|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AK028751|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AK151498|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	NM_028200|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	BC057621|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AK032561|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene	AY751521|1300018I17Rik|72325|RIKEN cDNA 1300018I17 gene
mm9_v1_chr14_-_73785035_73785066	0.418273	HNF4A_NR2F1,2.p2	AK002599|Itm2b|16432|integral membrane protein 2B	AK153103|Itm2b|16432|integral membrane protein 2B	AK159307|Itm2b|16432|integral membrane protein 2B	AK003224|Itm2b|16432|integral membrane protein 2B	BC004731|Itm2b|16432|integral membrane protein 2B	AK003587|Itm2b|16432|integral membrane protein 2B	AK003928|Itm2b|16432|integral membrane protein 2B	AK088270|Itm2b|16432|integral membrane protein 2B	AK159340|Itm2b|16432|integral membrane protein 2B	AK159426|Itm2b|16432|integral membrane protein 2B	AK159628|Itm2b|16432|integral membrane protein 2B	AK159792|Itm2b|16432|integral membrane protein 2B	AK160101|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr1_-_193006986_193007136	0.416921	HNF4A_NR2F1,2.p2	AY329367|Atf3|11910|activating transcription factor 3	BC064799|Atf3|11910|activating transcription factor 3	U19118|Atf3|11910|activating transcription factor 3	AK156786|Atf3|11910|activating transcription factor 3
mm9_v1_chr7_-_134041745_134041798	0.415135	HNF4A_NR2F1,2.p2	AK152526|Tmem219|68742|transmembrane protein 219	BC023442|Tmem219|68742|transmembrane protein 219	NM_026827|Tmem219|68742|transmembrane protein 219	NM_028389|Tmem219|68742|transmembrane protein 219	AK013646|Tmem219|68742|transmembrane protein 219
mm9_v1_chr5_+_137943876_137943900	0.413549	HNF4A_NR2F1,2.p2	AK020298|9130604C24Rik|77707|RIKEN cDNA 9130604C24 gene
mm9_v1_chr14_+_55713609_55713673	0.413445	HNF4A_NR2F1,2.p2	NM_153083|Thtpa|105663|thiamine triphosphatase
mm9_v1_chr2_+_22924699_22924786	0.411647	HNF4A_NR2F1,2.p2	BC084584|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr14_-_21475679_21475701	0.41143	HNF4A_NR2F1,2.p2	AY013298|Myoz1|59011|myozenin 1	AJ005620|Myoz1|59011|myozenin 1
mm9_v1_chr2_-_25110892_25110940	0.410999	HNF4A_NR2F1,2.p2	BC049789|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK163207|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK143124|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK169885|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK019617|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	NM_001082476|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1
mm9_v1_chrX_+_7461369_7461465	0.40804	HNF4A_NR2F1,2.p2	AF229634|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	NM_001083937|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	NM_078484|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	BC037701|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	AB027147|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	AK146830|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2	AK155755|Slc35a2|22232|solute carrier family 35 (UDP-galactose transporter), member A2
mm9_v1_chr4_-_116324064_116324305	0.40789	HNF4A_NR2F1,2.p2	AF225564|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC046762|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011321|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011794|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK160185|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK005376|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK152086|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC039926|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011908|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK144198|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK168950|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011388|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011918|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK146081|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK159573|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK164461|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011667|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011856|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK146278|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AY207463|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	NM_021473|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr1_+_182656137_182656231	0.405563	HNF4A_NR2F1,2.p2	AF022770|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK030371|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	NM_133225|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK167272|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	AK168799|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	BC050121|Acbd3|170760|acyl-Coenzyme A binding domain containing 3	BC060602|Acbd3|170760|acyl-Coenzyme A binding domain containing 3
mm9_v1_chr19_-_4839283_4839342	0.402167	HNF4A_NR2F1,2.p2	AF173379|Ccs|12460|copper chaperone for superoxide dismutase	BC026938|Ccs|12460|copper chaperone for superoxide dismutase	NM_016892|Ccs|12460|copper chaperone for superoxide dismutase
mm9_v1_chr13_+_33415945_33415945	0.401372	HNF4A_NR2F1,2.p2	BC052216|Serpinb9f|20709|serine (or cysteine) peptidase inhibitor, clade B, member 9f	NM_183197|Serpinb9f|20709|serine (or cysteine) peptidase inhibitor, clade B, member 9f
mm9_v1_chr4_+_14791353_14791554	0.400926	HNF4A_NR2F1,2.p2	AK049213|Tmem55a|72519|transmembrane protein 55A	NM_028264|Tmem55a|72519|transmembrane protein 55A	AK033845|Tmem55a|72519|transmembrane protein 55A	AK012054|Tmem55a|72519|transmembrane protein 55A	AX775959|Tmem55a|72519|transmembrane protein 55A	BC021435|Tmem55a|72519|transmembrane protein 55A	AK206695|Tmem55a|72519|transmembrane protein 55A
mm9_v1_chr14_+_58417049_58417112	0.400887	HNF4A_NR2F1,2.p2	AK144904|Sap18|20220|Sin3-associated polypeptide 18	AK146928|Sap18|20220|Sin3-associated polypeptide 18	NM_001142441|Gm10094|100041953|predicted gene 10094	BC006625|Sap18|20220|Sin3-associated polypeptide 18	AK006647|Sap18|20220|Sin3-associated polypeptide 18	AK085992|Sap18|20220|Sin3-associated polypeptide 18	Z97062|Sap18|20220|Sin3-associated polypeptide 18	BC099480|Sap18|20220|Sin3-associated polypeptide 18	AK133619|Sap18|20220|Sin3-associated polypeptide 18	AK005189|Sap18|20220|Sin3-associated polypeptide 18
mm9_v1_chr4_-_131628011_131628011	0.400463	HNF4A_NR2F1,2.p2	L00919|Epb4.1|269587|erythrocyte protein band 4.1	NM_183428|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr12_-_60112987_60113003	0.400399	HNF4A_NR2F1,2.p2	BC034610|Sec23a|20334|SEC23A (S. cerevisiae)	NM_009147|Sec23a|20334|SEC23A (S. cerevisiae)
mm9_v1_chr15_-_63640293_63640293	0.400113	HNF4A_NR2F1,2.p2	AK137662|Gsdmc|83492|gasdermin C	NM_031378|Gsdmc|83492|gasdermin C
mm9_v1_chr11_+_98245124_98245152	0.399119	HNF4A_NR2F1,2.p2	AJ223854|Tcap|21393|titin-cap	NM_011540|Tcap|21393|titin-cap	AK010167|Tcap|21393|titin-cap	Y15845|Tcap|21393|titin-cap	BC027631|Tcap|21393|titin-cap	BC032992|Tcap|21393|titin-cap
mm9_v1_chr11_+_78075242_78075302	0.398157	HNF4A_NR2F1,2.p2	AK150829|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	NM_001002004|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC080706|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	AK149719|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC075633|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene	BC019798|2610507B11Rik|72503|RIKEN cDNA 2610507B11 gene
mm9_v1_chr11_+_96179580_96179580	0.396016	HNF4A_NR2F1,2.p2	BC095947|Hoxb4|15412|homeobox B4	NM_010459|Hoxb4|15412|homeobox B4
mm9_v1_chr8_+_87213145_87213176	0.395839	HNF4A_NR2F1,2.p2	NM_001164559|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_001164560|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	NM_198020|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	BC027404|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr1_-_174149989_174150025	0.395502	HNF4A_NR2F1,2.p2	NM_009813|Casq1|12372|calsequestrin 1
mm9_v1_chr2_-_103637714_103637791	0.395298	HNF4A_NR2F1,2.p2	AK133891|Caprin1|53872|cell cycle associated protein 1	AK170830|Caprin1|53872|cell cycle associated protein 1	AK147514|Caprin1|53872|cell cycle associated protein 1	BC052427|Caprin1|53872|cell cycle associated protein 1	AK157707|Caprin1|53872|cell cycle associated protein 1
mm9_v1_chr16_-_33056255_33056271	0.394891	HNF4A_NR2F1,2.p2	BC049990|Iqcg|69707|IQ motif containing G	AK158170|Iqcg|69707|IQ motif containing G	NM_178378|Iqcg|69707|IQ motif containing G
mm9_v1_chr3_-_87689483_87689550	0.394576	HNF4A_NR2F1,2.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr16_-_21694608_21694737	0.394265	HNF4A_NR2F1,2.p2	AK051892|2510009E07Rik|72190|RIKEN cDNA 2510009E07 gene	AK044207|2510009E07Rik|72190|RIKEN cDNA 2510009E07 gene	AK053253|2510009E07Rik|72190|RIKEN cDNA 2510009E07 gene	BC072629|2510009E07Rik|72190|RIKEN cDNA 2510009E07 gene	BC052490|2510009E07Rik|72190|RIKEN cDNA 2510009E07 gene	NM_001001881|2510009E07Rik|72190|RIKEN cDNA 2510009E07 gene
mm9_v1_chr4_-_138375124_138375197	0.392009	HNF4A_NR2F1,2.p2	AF162713|Pla2g5|18784|phospholipase A2, group V	BC030899|Pla2g5|18784|phospholipase A2, group V	NM_011110|Pla2g5|18784|phospholipase A2, group V	AK161336|Pla2g5|18784|phospholipase A2, group V
mm9_v1_chr7_-_27980727_27980786	0.391119	HNF4A_NR2F1,2.p2	NM_001046637|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A
mm9_v1_chr2_-_91771836_91771855	0.390252	HNF4A_NR2F1,2.p2	M19662|Mdk|17242|midkine	NM_001012335|Mdk|17242|midkine
mm9_v1_chr19_-_5424856_5425071	0.390211	HNF4A_NR2F1,2.p2	BC002090|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)	NM_024176|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)	AK010152|Drap1|66556|Dr1 associated protein 1 (negative cofactor 2 alpha)
mm9_v1_chr7_-_31348148_31348229	0.387126	HNF4A_NR2F1,2.p2	AK002440|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	AK007621|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	AK006284|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	BC024347|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	NM_025498|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)	BC081443|Psenen|66340|presenilin enhancer 2 homolog (C. elegans)
mm9_v1_chr14_-_65716907_65716928	0.385275	HNF4A_NR2F1,2.p2	
mm9_v1_chr15_-_81229961_81230023	0.383861	HNF4A_NR2F1,2.p2	CT010318|St13|70356|suppression of tumorigenicity 13
mm9_v1_chr17_+_26813327_26813409	0.383443	HNF4A_NR2F1,2.p2	AK017760|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	NM_025272|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK159669|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK134836|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK007610|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK008464|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK168015|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	BC024733|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK013229|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E	AK030335|Atp6v0e|11974|ATPase, H+ transporting, lysosomal V0 subunit E
mm9_v1_chr7_-_148379755_148379780	0.383254	HNF4A_NR2F1,2.p2	BC011083|Hras1|15461|Harvey rat sarcoma virus oncogene 1
mm9_v1_chr13_-_74454770_74454775	0.382314	HNF4A_NR2F1,2.p2	NM_011051|Pdcd6|18570|programmed cell death 6
mm9_v1_chr2_+_28368766_28368850	0.381902	HNF4A_NR2F1,2.p2	AK141959|Ralgds|19730|ral guanine nucleotide dissociation stimulator	AK129328|Ralgds|19730|ral guanine nucleotide dissociation stimulator	L07924|Ralgds|19730|ral guanine nucleotide dissociation stimulator
mm9_v1_chr14_+_59820064_59820146	0.381347	HNF4A_NR2F1,2.p2	NM_027764|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK089923|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK088299|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	BC067005|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	AK033501|Rcbtb1|71330|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm9_v1_chr9_+_118716348_118716374	0.379226	HNF4A_NR2F1,2.p2	BC049939|Itga9|104099|integrin alpha 9
mm9_v1_chr4_-_115726385_115726456	0.377785	HNF4A_NR2F1,2.p2	BC024628|Nsun4|72181|NOL1/NOP2/Sun domain family, member 4
mm9_v1_chr11_+_120537974_120537974	0.376924	HNF4A_NR2F1,2.p2	AK146061|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	NM_001164224|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)	NM_198223|Aspscr1|68938|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm9_v1_chr7_+_88138537_88138597	0.376749	HNF4A_NR2F1,2.p2	AK042675|Zfp592|233410|zinc finger protein 592	NM_178707|Zfp592|233410|zinc finger protein 592	AK143618|Zfp592|233410|zinc finger protein 592	AK129089|Zfp592|233410|zinc finger protein 592
mm9_v1_chr2_+_10075242_10075276	0.375015	HNF4A_NR2F1,2.p2	AK087428|Itih5|209378|inter-alpha (globulin) inhibitor H5	AK134707|Itih5|209378|inter-alpha (globulin) inhibitor H5	AK077381|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr8_+_28196312_28196323	0.373959	HNF4A_NR2F1,2.p2	AF378759|Gpr124|78560|G protein-coupled receptor 124	NM_054044|Gpr124|78560|G protein-coupled receptor 124	BC138451|Gpr124|78560|G protein-coupled receptor 124	BC138452|Gpr124|78560|G protein-coupled receptor 124
mm9_v1_chr2_+_25145414_25145466	0.372974	HNF4A_NR2F1,2.p2	NM_146117|Lrrc26|227618|leucine rich repeat containing 26	AK137758|Lrrc26|227618|leucine rich repeat containing 26	BC004853|Lrrc26|227618|leucine rich repeat containing 26	AK142669|Lrrc26|227618|leucine rich repeat containing 26	BC024531|Lrrc26|227618|leucine rich repeat containing 26	BC024539|Lrrc26|227618|leucine rich repeat containing 26
mm9_v1_chr7_+_86418082_86418112	0.372848	HNF4A_NR2F1,2.p2	AK153642|Abhd2|54608|abhydrolase domain containing 2
mm9_v1_chr9_+_50425425_50425450	0.3701	HNF4A_NR2F1,2.p2	NM_028300|Pih1d2|72614|PIH1 domain containing 2	AK080744|Pih1d2|72614|PIH1 domain containing 2	BC039645|Pih1d2|72614|PIH1 domain containing 2	AK012458|Pih1d2|72614|PIH1 domain containing 2
mm9_v1_chr5_-_34125322_34125413	0.369654	HNF4A_NR2F1,2.p2	BC023862|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	AF061026|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC061690|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	NM_019694|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC046326|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC055865|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	AB041582|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	BC061115|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1	AK133849|Letm1|56384|leucine zipper-EF-hand containing transmembrane protein 1
mm9_v1_chr12_+_85750017_85750095	0.368523	HNF4A_NR2F1,2.p2	AK013494|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	NM_028377|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	AK133381|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151099|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151103|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene
mm9_v1_chr7_+_147311582_147311619	0.368046	HNF4A_NR2F1,2.p2	AF226656|Paox|212503|polyamine oxidase (exo-N4-amino)	AK030664|Paox|212503|polyamine oxidase (exo-N4-amino)	NM_153783|Paox|212503|polyamine oxidase (exo-N4-amino)	BC082783|Paox|212503|polyamine oxidase (exo-N4-amino)	AM049402|Paox|212503|polyamine oxidase (exo-N4-amino)	AK159137|Paox|212503|polyamine oxidase (exo-N4-amino)
mm9_v1_chr14_+_19103655_19103798	0.367641	HNF4A_NR2F1,2.p2	NM_023526|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK028539|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK148040|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK010285|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	BC061092|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK167340|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AF225707|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1
mm9_v1_chr17_-_47551659_47551659	0.366756	HNF4A_NR2F1,2.p2	AK005579|1700001C19Rik|75462|RIKEN cDNA 1700001C19 gene	NM_001172091|1700001C19Rik|75462|RIKEN cDNA 1700001C19 gene
mm9_v1_chr13_-_78337844_78338043	0.366694	HNF4A_NR2F1,2.p2	U07625|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	BC048695|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1
mm9_v1_chr2_+_120229988_120230073	0.365568	HNF4A_NR2F1,2.p2	BC058197|Ganc|76051|glucosidase, alpha; neutral C
mm9_v1_chrX_+_34335651_34335798	0.365224	HNF4A_NR2F1,2.p2	BC004570|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	BC086756|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	U10404|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK188826|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK195999|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr8_+_93352767_93352776	0.364784	HNF4A_NR2F1,2.p2	AK020244|Chd9|109151|chromodomain helicase DNA binding protein 9
mm9_v1_chr6_+_54276835_54277005	0.364483	HNF4A_NR2F1,2.p2	AK136438|Prr15|78004|proline rich 15	BC055838|Prr15|78004|proline rich 15	AK021401|Prr15|78004|proline rich 15	AJ132433|Prr15|78004|proline rich 15	NM_030024|Prr15|78004|proline rich 15
mm9_v1_chr17_-_35292893_35292992	0.361495	HNF4A_NR2F1,2.p2	BC006664|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr9_-_26837634_26837702	0.359848	HNF4A_NR2F1,2.p2	AK155578|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	AK171154|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	BC049180|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	AK031589|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)	NM_178027|Vps26b|69091|vacuolar protein sorting 26 homolog B (yeast)
mm9_v1_chr18_-_68588897_68588973	0.359524	HNF4A_NR2F1,2.p2	AK033100|Mc2r|17200|melanocortin 2 receptor	NM_008560|Mc2r|17200|melanocortin 2 receptor	D85688|Mc2r|17200|melanocortin 2 receptor
mm9_v1_chr10_-_126978704_126978744	0.359353	HNF4A_NR2F1,2.p2	BC043675|Lrp1|16971|low density lipoprotein receptor-related protein 1
mm9_v1_chr1_-_31006558_31006594	0.357022	HNF4A_NR2F1,2.p2	BC055039|Ptp4a1|19243|protein tyrosine phosphatase 4a1	U84411|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr7_-_29221173_29221209	0.356572	HNF4A_NR2F1,2.p2	NM_175021|Samd4b|233033|sterile alpha motif domain containing 4B
mm9_v1_chr15_-_38448923_38449033	0.355181	HNF4A_NR2F1,2.p2	BC046814|Azin1|54375|antizyme inhibitor 1	BC021152|Azin1|54375|antizyme inhibitor 1	BC019412|Azin1|54375|antizyme inhibitor 1	AK088112|Azin1|54375|antizyme inhibitor 1	AK088671|Azin1|54375|antizyme inhibitor 1	AK133914|Azin1|54375|antizyme inhibitor 1	AK049680|Azin1|54375|antizyme inhibitor 1	NM_001102458|Azin1|54375|antizyme inhibitor 1	NM_018745|Azin1|54375|antizyme inhibitor 1
mm9_v1_chr8_+_126755253_126755502	0.353046	HNF4A_NR2F1,2.p2	NM_139272|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK046567|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	BC059818|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK149609|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK145122|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AF348968|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	AK151536|Galnt2|108148|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm9_v1_chr4_-_33335761_33335761	0.352187	HNF4A_NR2F1,2.p2	NM_001033225|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr10_+_62849310_62849422	0.351788	HNF4A_NR2F1,2.p2	NM_013888|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AK032207|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	AF132906|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC013501|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12	BC071211|Dnajc12|30045|DnaJ (Hsp40) homolog, subfamily C, member 12
mm9_v1_chr1_-_24107036_24107122	0.350468	HNF4A_NR2F1,2.p2	AK053786|Fam135a|68187|family with sequence similarity 135, member A	AK081262|Fam135a|68187|family with sequence similarity 135, member A
mm9_v1_chr4_+_118100682_118100801	0.350331	HNF4A_NR2F1,2.p2	NM_001039175|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	NM_019422|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK156003|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK171217|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK135348|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	BC096673|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1	AK003743|Elovl1|54325|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
mm9_v1_chr2_+_152530554_152530569	0.349663	HNF4A_NR2F1,2.p2	
mm9_v1_chr15_+_12251250_12251389	0.348852	HNF4A_NR2F1,2.p2	AB271918|Golph3|66629|golgi phosphoprotein 3	BC051035|Golph3|66629|golgi phosphoprotein 3	NM_025673|Golph3|66629|golgi phosphoprotein 3	BC039909|Golph3|66629|golgi phosphoprotein 3	BC031445|Golph3|66629|golgi phosphoprotein 3
mm9_v1_chr11_-_120942419_120942459	0.347834	HNF4A_NR2F1,2.p2	BC010462|Sectm1a|209588|secreted and transmembrane 1A	AK170159|Sectm1a|209588|secreted and transmembrane 1A	AK082020|Sectm1a|209588|secreted and transmembrane 1A	NM_145373|Sectm1a|209588|secreted and transmembrane 1A	AK171246|Sectm1a|209588|secreted and transmembrane 1A
mm9_v1_chr2_-_167174531_167174736	0.347298	HNF4A_NR2F1,2.p2	AF142673|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5	NM_019835|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5	AB004786|B4galt5|56336|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm9_v1_chr8_+_125966855_125966934	0.346986	HNF4A_NR2F1,2.p2	AK081295|Def8|23854|differentially expressed in FDCP 8	AK133979|Def8|23854|differentially expressed in FDCP 8	AK028726|Def8|23854|differentially expressed in FDCP 8	AK050405|Def8|23854|differentially expressed in FDCP 8	AK087778|Def8|23854|differentially expressed in FDCP 8	AK164147|Def8|23854|differentially expressed in FDCP 8	NM_054046|Def8|23854|differentially expressed in FDCP 8	AK034028|Def8|23854|differentially expressed in FDCP 8	AK046271|Def8|23854|differentially expressed in FDCP 8	AK086174|Def8|23854|differentially expressed in FDCP 8	BC003306|Def8|23854|differentially expressed in FDCP 8	AK150334|Def8|23854|differentially expressed in FDCP 8	AK150994|Def8|23854|differentially expressed in FDCP 8
mm9_v1_chr1_-_37597847_37597897	0.345691	HNF4A_NR2F1,2.p2	AK155724|Mgat4a|269181|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm9_v1_chr10_+_77068939_77069034	0.345148	HNF4A_NR2F1,2.p2	AK012742|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK150063|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK150200|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK162035|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK160169|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK013019|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK148306|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK168988|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	NM_019929|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AK167207|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	AF063847|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	BC115488|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)	BC115489|Sumo3|20610|SMT3 suppressor of mif two 3 homolog 3 (yeast)
mm9_v1_chr5_+_136592559_136592606	0.34338	HNF4A_NR2F1,2.p2	AK158610|Polr2j|20022|polymerase (RNA) II (DNA directed) polypeptide J	NM_011293|Polr2j|20022|polymerase (RNA) II (DNA directed) polypeptide J	AK158644|Polr2j|20022|polymerase (RNA) II (DNA directed) polypeptide J	BC042939|Polr2j|20022|polymerase (RNA) II (DNA directed) polypeptide J	D85818|Polr2j|20022|polymerase (RNA) II (DNA directed) polypeptide J
mm9_v1_chr14_-_37781899_37781902	0.341258	HNF4A_NR2F1,2.p2	AK013689|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr4_+_120339167_120339220	0.340462	HNF4A_NR2F1,2.p2	NM_019563|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK012136|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AK154030|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC025116|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC080723|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	AF143369|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132360|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	BC132362|Cited4|56222|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4
mm9_v1_chr7_+_105805420_105805457	0.339258	HNF4A_NR2F1,2.p2	
mm9_v1_chr15_+_102864825_102864872	0.338533	HNF4A_NR2F1,2.p2	NM_013553|Hoxc4|15423|homeobox C4	X69019|Hoxc4|15423|homeobox C4	BC144778|Hoxc4|15423|homeobox C4	BC150664|Hoxc4|15423|homeobox C4
mm9_v1_chr1_+_174012641_174012773	0.338123	HNF4A_NR2F1,2.p2	NM_009938|Copa|12847|coatomer protein complex subunit alpha	AK162632|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr13_+_14046883_14047111	0.335426	HNF4A_NR2F1,2.p2	AK044785|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK151677|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK153362|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK035259|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK084275|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK085691|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK134868|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK167635|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	NM_178640|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	BC085110|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK041022|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AB116655|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	AK144880|B3galnt2|97884|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
mm9_v1_chr6_-_69193672_69193737	0.333202	HNF4A_NR2F1,2.p2	
mm9_v1_chr1_-_39535525_39535591	0.333051	HNF4A_NR2F1,2.p2	BC065081|Tbc1d8|54610|TBC1 domain family, member 8	AK141816|Tbc1d8|54610|TBC1 domain family, member 8	AK141520|Tbc1d8|54610|TBC1 domain family, member 8	AK138630|Tbc1d8|54610|TBC1 domain family, member 8	NM_018775|Tbc1d8|54610|TBC1 domain family, member 8
mm9_v1_chr9_+_99370839_99370876	0.332777	HNF4A_NR2F1,2.p2	BC068205|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene	AK005560|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene
mm9_v1_chr10_-_6473873_6473873	0.331648	HNF4A_NR2F1,2.p2	AK135923|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	NM_001033253|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm9_v1_chr2_-_93873363_93873460	0.331333	HNF4A_NR2F1,2.p2	AK210045|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12
mm9_v1_chr5_+_8893845_8893960	0.331245	HNF4A_NR2F1,2.p2	BC150687|Abcb4|18670|ATP-binding cassette, sub-family B (MDR/TAP), member 4	AK050345|Abcb4|18670|ATP-binding cassette, sub-family B (MDR/TAP), member 4
mm9_v1_chr10_-_79785786_79785871	0.329612	HNF4A_NR2F1,2.p2	BC052535|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4
mm9_v1_chrX_-_131076136_131076235	0.328049	HNF4A_NR2F1,2.p2	BC004796|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	AF150081|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	AK088903|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	AK165573|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	AB031055|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	BC094631|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	NM_013898|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	AK011402|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)	AK090079|Timm8a1|30058|translocase of inner mitochondrial membrane 8 homolog a1 (yeast)
mm9_v1_chr6_+_4853319_4853431	0.327874	HNF4A_NR2F1,2.p2	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr19_-_12576485_12576634	0.32781	HNF4A_NR2F1,2.p2	NM_172442|Dtx4|207521|deltex 4 homolog (Drosophila)
mm9_v1_chr16_+_18877336_18877523	0.327777	HNF4A_NR2F1,2.p2	X92590|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X75295|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)	X99712|Hira|15260|histone cell cycle regulation defective homolog A (S. cerevisiae)
mm9_v1_chr4_-_114581492_114581502	0.327526	HNF4A_NR2F1,2.p2	AF023915|Foxd2|17301|forkhead box D2	NM_008593|Foxd2|17301|forkhead box D2
mm9_v1_chr19_-_10076122_10076122	0.326158	HNF4A_NR2F1,2.p2	NM_011913|Best1|24115|bestrophin 1
mm9_v1_chr7_+_35971403_35971489	0.326014	HNF4A_NR2F1,2.p2	BC027516|Slc7a10|53896|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	NM_017394|Slc7a10|53896|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	AK031867|Slc7a10|53896|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	BC054765|Slc7a10|53896|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	AB026688|Slc7a10|53896|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
mm9_v1_chr12_-_102321911_102321936	0.32441	HNF4A_NR2F1,2.p2	AK053668|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_001160214|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_211355|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr19_+_34682418_34682459	0.324311	HNF4A_NR2F1,2.p2	AK150632|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK151442|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK152620|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	NM_001005858|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene	AK077243|I830012O16Rik|667370|RIKEN cDNA I830012O16 gene
mm9_v1_chrX_+_95345000_95345120	0.32336	HNF4A_NR2F1,2.p2	X59592|Ar|11835|androgen receptor	S56585|Ar|11835|androgen receptor	AK133647|Ar|11835|androgen receptor	NM_013476|Ar|11835|androgen receptor	X53779|Ar|11835|androgen receptor	X59411|Ar|11835|androgen receptor	M37890|Ar|11835|androgen receptor
mm9_v1_chr15_-_103395483_103395508	0.323249	HNF4A_NR2F1,2.p2	M93428|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145548|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145832|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145858|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC031931|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	AK021358|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	NM_008134|Glycam1|14663|glycosylation dependent cell adhesion molecule 1
mm9_v1_chrX_+_34335647_34335650	0.32284	HNF4A_NR2F1,2.p2	AK012751|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK002283|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK017881|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK088730|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	X70847|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr4_+_115769086_115769178	0.321388	HNF4A_NR2F1,2.p2	AK217820|Lrrc41|230654|leucine rich repeat containing 41
mm9_v1_chr13_-_74454677_74454754	0.32017	HNF4A_NR2F1,2.p2	AK150335|Pdcd6|18570|programmed cell death 6	AK008610|Pdcd6|18570|programmed cell death 6	AK078044|Pdcd6|18570|programmed cell death 6	U49112|Pdcd6|18570|programmed cell death 6	BC040079|Pdcd6|18570|programmed cell death 6	AK028223|Pdcd6|18570|programmed cell death 6	AK147979|Pdcd6|18570|programmed cell death 6
mm9_v1_chr2_+_157854457_157854551	0.320145	HNF4A_NR2F1,2.p2	BC028819|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	BC042447|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	BC054350|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	NM_027434|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B	AK139995|Rprd1b|70470|regulation of nuclear pre-mRNA domain containing 1B
mm9_v1_chr12_-_60112855_60112974	0.319166	HNF4A_NR2F1,2.p2	AY082671|Sec23a|20334|SEC23A (S. cerevisiae)	AK028152|Sec23a|20334|SEC23A (S. cerevisiae)
mm9_v1_chr3_-_40886864_40886875	0.317488	HNF4A_NR2F1,2.p2	AK014543|Pgrmc2|70804|progesterone receptor membrane component 2
mm9_v1_chr2_-_121176719_121176752	0.316181	HNF4A_NR2F1,2.p2	AK122264|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	AK083140|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	NM_178795|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	BC065138|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1	AF502585|Ppip5k1|327655|diphosphoinositol pentakisphosphate kinase 1
mm9_v1_chr7_-_90943328_90943348	0.315261	HNF4A_NR2F1,2.p2	BC048079|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	AK006375|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	BC061016|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	NM_029335|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene
mm9_v1_chr8_+_109206967_109207060	0.314711	HNF4A_NR2F1,2.p2	AK085030|Tmco7|272538|transmembrane and coiled-coil domains 7	NM_173037|Tmco7|272538|transmembrane and coiled-coil domains 7	AK077757|Tmco7|272538|transmembrane and coiled-coil domains 7	AK054283|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066134|Tmco7|272538|transmembrane and coiled-coil domains 7	BC066869|Tmco7|272538|transmembrane and coiled-coil domains 7	BC069838|Tmco7|272538|transmembrane and coiled-coil domains 7	AK076373|Tmco7|272538|transmembrane and coiled-coil domains 7	AK173250|Tmco7|272538|transmembrane and coiled-coil domains 7
mm9_v1_chr2_-_181194085_181194141	0.314675	HNF4A_NR2F1,2.p2	BC058179|Zbtb46|72147|zinc finger and BTB domain containing 46	AK155148|Zbtb46|72147|zinc finger and BTB domain containing 46	AK011461|Zbtb46|72147|zinc finger and BTB domain containing 46	AK085310|Zbtb46|72147|zinc finger and BTB domain containing 46	NM_028125|Zbtb46|72147|zinc finger and BTB domain containing 46
mm9_v1_chr4_+_125939622_125939671	0.312158	HNF4A_NR2F1,2.p2	AK151747|Trappc3|27096|trafficking protein particle complex 3	BC003736|Trappc3|27096|trafficking protein particle complex 3	NM_013718|Trappc3|27096|trafficking protein particle complex 3	AF041433|Trappc3|27096|trafficking protein particle complex 3
mm9_v1_chr2_+_151931424_151931452	0.31112	HNF4A_NR2F1,2.p2	AK161066|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)	BC011325|Srxn1|76650|sulfiredoxin 1 homolog (S. cerevisiae)
mm9_v1_chr4_-_41587334_41587372	0.310002	HNF4A_NR2F1,2.p2	AK009710|Enho|69638|energy homeostasis associated	NM_027147|Enho|69638|energy homeostasis associated
mm9_v1_chr2_-_3336293_3336378	0.308538	HNF4A_NR2F1,2.p2	X64455|Meig1|104362|meiosis expressed gene 1	AK006347|Meig1|104362|meiosis expressed gene 1	AK007239|Meig1|104362|meiosis expressed gene 1
mm9_v1_chr10_+_74636715_74636718	0.307695	HNF4A_NR2F1,2.p2	AK017213|Bcr|110279|breakpoint cluster region
mm9_v1_chr17_+_35378690_35378814	0.307356	HNF4A_NR2F1,2.p2	NM_019693|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK002779|H2-Q6|110557|histocompatibility 2, Q region locus 6	AK171507|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	AK051034|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC011067|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	BC024859|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr8_+_125566465_125566534	0.30658	HNF4A_NR2F1,2.p2	AK012741|2810013P06Rik|67206|RIKEN cDNA 2810013P06 gene	AK077895|2810013P06Rik|67206|RIKEN cDNA 2810013P06 gene
mm9_v1_chr17_+_87362612_87362644	0.306072	HNF4A_NR2F1,2.p2	AB060650|Rhoq|104215|ras homolog gene family, member Q	BC048813|Rhoq|104215|ras homolog gene family, member Q
mm9_v1_chr14_-_21212709_21212791	0.305766	HNF4A_NR2F1,2.p2	AK019243|Mrps16|66242|mitochondrial ribosomal protein S16	BC024656|Mrps16|66242|mitochondrial ribosomal protein S16	AK005206|Mrps16|66242|mitochondrial ribosomal protein S16	NM_025440|Mrps16|66242|mitochondrial ribosomal protein S16
mm9_v1_chr1_+_174012909_174013066	0.304999	HNF4A_NR2F1,2.p2	AK171625|Copa|12847|coatomer protein complex subunit alpha	AK043479|Copa|12847|coatomer protein complex subunit alpha	AK164910|Copa|12847|coatomer protein complex subunit alpha	BC047429|Copa|12847|coatomer protein complex subunit alpha	BC024070|Copa|12847|coatomer protein complex subunit alpha	AF248032|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr15_+_98957150_98957201	0.304949	HNF4A_NR2F1,2.p2	AK159335|Spats2|72572|spermatogenesis associated, serine-rich 2
mm9_v1_chr14_-_118450875_118451546	0.303214	HNF4A_NR2F1,2.p2	EU554632|Dct|13190|dopachrome tautomerase	AK214181|Dct|13190|dopachrome tautomerase	AK214448|Dct|13190|dopachrome tautomerase	AK217087|Dct|13190|dopachrome tautomerase	AK212164|Dct|13190|dopachrome tautomerase	AK219002|Dct|13190|dopachrome tautomerase	BC082330|Dct|13190|dopachrome tautomerase	AK209892|Dct|13190|dopachrome tautomerase	AK191654|Dct|13190|dopachrome tautomerase	BC067064|Dct|13190|dopachrome tautomerase	X63349|Dct|13190|dopachrome tautomerase	AK033040|Dct|13190|dopachrome tautomerase	NM_010024|Dct|13190|dopachrome tautomerase	AK202452|Dct|13190|dopachrome tautomerase
mm9_v1_chr16_-_13730474_13730677	0.299868	HNF4A_NR2F1,2.p2	AK076921|Pla2g10|26565|phospholipase A2, group X	AF210429|Pla2g10|26565|phospholipase A2, group X	BC028879|Pla2g10|26565|phospholipase A2, group X	AF166097|Pla2g10|26565|phospholipase A2, group X	NM_011987|Pla2g10|26565|phospholipase A2, group X
mm9_v1_chr14_+_55305007_55305091	0.299437	HNF4A_NR2F1,2.p2	NM_021437|1700123O20Rik|58248|RIKEN cDNA 1700123O20 gene	AK030845|1700123O20Rik|58248|RIKEN cDNA 1700123O20 gene	AB041657|1700123O20Rik|58248|RIKEN cDNA 1700123O20 gene
mm9_v1_chr5_+_65194814_65194820	0.298019	HNF4A_NR2F1,2.p2	AK010713|Klf3|16599|Kruppel-like factor 3 (basic)
mm9_v1_chr9_-_108551631_108551731	0.297196	HNF4A_NR2F1,2.p2	AK165028|Arih2|23807|ariadne homolog 2 (Drosophila)	AK149936|Arih2|23807|ariadne homolog 2 (Drosophila)	BC051998|Arih2|23807|ariadne homolog 2 (Drosophila)	BC052422|Arih2|23807|ariadne homolog 2 (Drosophila)	NM_011790|Arih2|23807|ariadne homolog 2 (Drosophila)	AK011094|Arih2|23807|ariadne homolog 2 (Drosophila)	AK168055|Arih2|23807|ariadne homolog 2 (Drosophila)
mm9_v1_chr2_-_25477449_25477538	0.294721	HNF4A_NR2F1,2.p2	BC048537|Tmem141|51875|transmembrane protein 141	AK004380|Tmem141|51875|transmembrane protein 141	NM_001040130|Tmem141|51875|transmembrane protein 141	NM_001109993|Tmem141|51875|transmembrane protein 141
mm9_v1_chr8_-_113551636_113551700	0.292798	HNF4A_NR2F1,2.p2	AK147499|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	AK013362|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_001190800|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b	NM_172284|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm9_v1_chr17_+_87424886_87424972	0.291589	HNF4A_NR2F1,2.p2	NM_019936|Cript|56724|cysteine-rich PDZ-binding protein	AK004828|Cript|56724|cysteine-rich PDZ-binding protein	AK029409|Cript|56724|cysteine-rich PDZ-binding protein	AK008523|Cript|56724|cysteine-rich PDZ-binding protein	BC023013|Cript|56724|cysteine-rich PDZ-binding protein	AF151637|Cript|56724|cysteine-rich PDZ-binding protein
mm9_v1_chr5_+_136514548_136514570	0.291452	HNF4A_NR2F1,2.p2	AK157647|Upk3b|100647|uroplakin 3B	AY233463|Upk3b|100647|uroplakin 3B	BC061224|Upk3b|100647|uroplakin 3B	AK042067|Upk3b|100647|uroplakin 3B
mm9_v1_chr6_-_41327594_41327676	0.290906	HNF4A_NR2F1,2.p2	BC098498|Prss3|22073|protease, serine, 3	AK131862|Prss3|22073|protease, serine, 3	NM_011645|Prss3|22073|protease, serine, 3	BC141304|Prss3|22073|protease, serine, 3
mm9_v1_chr3_-_57496415_57496458	0.290732	HNF4A_NR2F1,2.p2	AK134766|Gm410|242037|predicted gene 410	AK138483|Gm410|242037|predicted gene 410	NM_001033349|Gm410|242037|predicted gene 410
mm9_v1_chr2_-_152158111_152158185	0.289753	HNF4A_NR2F1,2.p2	AK146176|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK088591|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK166075|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	AK085559|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	NM_001083921|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1
mm9_v1_chr18_-_36904178_36904211	0.289738	HNF4A_NR2F1,2.p2	BC006815|Ndufa2|17991|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2	AF124786|Ndufa2|17991|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2	AK003608|Ndufa2|17991|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2	NM_010885|Ndufa2|17991|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2
mm9_v1_chr9_-_99776467_99776588	0.288755	HNF4A_NR2F1,2.p2	BC069948|Sox14|20669|SRY-box containing gene 14	AK138208|Sox14|20669|SRY-box containing gene 14	BC055767|Sox14|20669|SRY-box containing gene 14	BC083360|Sox14|20669|SRY-box containing gene 14	BC100555|Sox14|20669|SRY-box containing gene 14	NM_011440|Sox14|20669|SRY-box containing gene 14
mm9_v1_chr11_-_69734131_69734131	0.287945	HNF4A_NR2F1,2.p2	AY129324|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166590|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr3_-_146278561_146278561	0.286837	HNF4A_NR2F1,2.p2	AK079224|Dnase2b|56629|deoxyribonuclease II beta	NM_019957|Dnase2b|56629|deoxyribonuclease II beta
mm9_v1_chr13_+_34831510_34831510	0.285332	HNF4A_NR2F1,2.p2	AK007247|Fam50b|108161|family with sequence similarity 50, member B	NM_138746|Fam50b|108161|family with sequence similarity 50, member B
mm9_v1_chr15_-_79158683_79158800	0.285299	HNF4A_NR2F1,2.p2	NM_001199023|Pla2g6|53357|phospholipase A2, group VI	NM_001199024|Pla2g6|53357|phospholipase A2, group VI	NM_001199025|Pla2g6|53357|phospholipase A2, group VI	NM_016915|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr2_+_140221224_140221330	0.28408	HNF4A_NR2F1,2.p2	BC038317|Macrod2|72899|MACRO domain containing 2	BC027552|Macrod2|72899|MACRO domain containing 2	BC028443|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr2_+_163820920_163821078	0.282163	HNF4A_NR2F1,2.p2	AK150414|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK151294|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK004872|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK011389|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	NM_018753|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AF058797|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK083367|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK158932|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK204033|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC132121|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC138512|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr1_-_75313519_75313542	0.281825	HNF4A_NR2F1,2.p2	BC092232|Dnpep|13437|aspartyl aminopeptidase	AK166276|Dnpep|13437|aspartyl aminopeptidase
mm9_v1_chr6_+_124999988_124999992	0.281324	HNF4A_NR2F1,2.p2	BC114591|Acrbp|54137|proacrosin binding protein	D17573|Acrbp|54137|proacrosin binding protein
mm9_v1_chr17_+_57498108_57498162	0.279661	HNF4A_NR2F1,2.p2	NM_010130|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK155862|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK151682|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66888|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66889|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66890|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66891|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	U66892|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK149898|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	X93328|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK133202|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	BC075688|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1	AK151303|Emr1|13733|EGF-like module containing, mucin-like, hormone receptor-like sequence 1
mm9_v1_chr17_+_75404865_75404880	0.277693	HNF4A_NR2F1,2.p2	NM_019919|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr7_-_109213606_109213687	0.27767	HNF4A_NR2F1,2.p2	AK078509|Rnf121|75212|ring finger protein 121	BC022686|Rnf121|75212|ring finger protein 121	NM_029211|Rnf121|75212|ring finger protein 121	AK168821|Rnf121|75212|ring finger protein 121	AK169089|Rnf121|75212|ring finger protein 121	AK159260|Rnf121|75212|ring finger protein 121
mm9_v1_chr7_-_107128967_107128967	0.277231	HNF4A_NR2F1,2.p2	NM_175388|Rnf169|108937|ring finger protein 169
mm9_v1_chr10_+_12810593_12810650	0.276258	HNF4A_NR2F1,2.p2	BC065150|Plagl1|22634|pleiomorphic adenoma gene-like 1	NM_009538|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142210|Plagl1|22634|pleiomorphic adenoma gene-like 1	AK142052|Plagl1|22634|pleiomorphic adenoma gene-like 1
mm9_v1_chr16_-_4789939_4789942	0.27625	HNF4A_NR2F1,2.p2	
mm9_v1_chr2_+_72123693_72123785	0.274612	HNF4A_NR2F1,2.p2	AK132186|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene	NM_023057|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene	NM_001164791|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene	NM_178084|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene
mm9_v1_chr11_-_96680500_96680758	0.274047	HNF4A_NR2F1,2.p2	AK201733|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	BC022152|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr6_+_125299717_125299857	0.273405	HNF4A_NR2F1,2.p2	NM_011609|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	AK154388|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	L26349|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	X57796|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	BC096429|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	AK159989|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	BC052675|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	BC004599|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	M60468|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a	X59238|Tnfrsf1a|21937|tumor necrosis factor receptor superfamily, member 1a
mm9_v1_chr11_+_77303247_77303355	0.271113	HNF4A_NR2F1,2.p2	AK008669|2210008F06Rik|70057|RIKEN cDNA 2210008F06 gene
mm9_v1_chr7_-_52308243_52308250	0.270422	HNF4A_NR2F1,2.p2	BC075628|Prr12|233210|proline rich 12	NM_175022|Prr12|233210|proline rich 12
mm9_v1_chr13_+_33341476_33341506	0.270342	HNF4A_NR2F1,2.p2	AK049429|Serpinb9e|20710|serine (or cysteine) peptidase inhibitor, clade B, member 9e	NM_011456|Serpinb9e|20710|serine (or cysteine) peptidase inhibitor, clade B, member 9e	BC050060|Serpinb9e|20710|serine (or cysteine) peptidase inhibitor, clade B, member 9e	U96709|Serpinb9e|20710|serine (or cysteine) peptidase inhibitor, clade B, member 9e	BC145592|Serpinb9e|20710|serine (or cysteine) peptidase inhibitor, clade B, member 9e	BC145593|Serpinb9e|20710|serine (or cysteine) peptidase inhibitor, clade B, member 9e
mm9_v1_chr19_+_25746900_25746909	0.270082	HNF4A_NR2F1,2.p2	AF539811|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	AK044891|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	NM_145831|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	AK140347|Dmrt2|226049|doublesex and mab-3 related transcription factor 2	AK140337|Dmrt2|226049|doublesex and mab-3 related transcription factor 2
mm9_v1_chr14_-_47407948_47408042	0.26966	HNF4A_NR2F1,2.p2	AK154479|Cnih|12793|cornichon homolog (Drosophila)	AK152432|Cnih|12793|cornichon homolog (Drosophila)	AK168154|Cnih|12793|cornichon homolog (Drosophila)	AK011200|Cnih|12793|cornichon homolog (Drosophila)	BC034868|Cnih|12793|cornichon homolog (Drosophila)	AK002293|Cnih|12793|cornichon homolog (Drosophila)	AF022811|Cnih|12793|cornichon homolog (Drosophila)	NM_009919|Cnih|12793|cornichon homolog (Drosophila)
mm9_v1_chr9_-_96379093_96379128	0.269485	HNF4A_NR2F1,2.p2	AK006703|Rnf7|19823|ring finger protein 7
mm9_v1_chr3_+_89070473_89070560	0.269331	HNF4A_NR2F1,2.p2	AK003223|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	NM_026767|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3	BC037761|Dpm3|68563|dolichyl-phosphate mannosyltransferase polypeptide 3
mm9_v1_chr6_-_52114644_52114829	0.266941	HNF4A_NR2F1,2.p2	AB221621|Hoxa2|15399|homeobox A2	M93292|Hoxa2|15399|homeobox A2	BC117105|Hoxa2|15399|homeobox A2	BC117107|Hoxa2|15399|homeobox A2	BC027688|Hoxa2|15399|homeobox A2	M95599|Hoxa2|15399|homeobox A2	NM_010451|Hoxa2|15399|homeobox A2
mm9_v1_chr15_-_81230036_81230148	0.266897	HNF4A_NR2F1,2.p2	AK150686|St13|70356|suppression of tumorigenicity 13	AK151631|St13|70356|suppression of tumorigenicity 13	AK159149|St13|70356|suppression of tumorigenicity 13	AK013981|St13|70356|suppression of tumorigenicity 13	AK154658|St13|70356|suppression of tumorigenicity 13	AK146528|St13|70356|suppression of tumorigenicity 13	AK152270|St13|70356|suppression of tumorigenicity 13	BC003843|St13|70356|suppression of tumorigenicity 13	NM_133726|St13|70356|suppression of tumorigenicity 13	AK147169|St13|70356|suppression of tumorigenicity 13
mm9_v1_chrX_-_159267249_159267385	0.266887	HNF4A_NR2F1,2.p2	AK162263|Txlng|353170|taxilin gamma	BC080778|Txlng|353170|taxilin gamma	AK161561|Txlng|353170|taxilin gamma	AK031783|Txlng|353170|taxilin gamma	BC059099|Txlng|353170|taxilin gamma	BC117898|Txlng|353170|taxilin gamma	BC117899|Txlng|353170|taxilin gamma	AK030100|Txlng|353170|taxilin gamma	NM_178935|Txlng|353170|taxilin gamma	AK078477|Txlng|353170|taxilin gamma	AK044130|Txlng|353170|taxilin gamma	DQ316984|Txlng|353170|taxilin gamma	DQ320011|Txlng|353170|taxilin gamma
mm9_v1_chr1_-_39634096_39634285	0.266187	HNF4A_NR2F1,2.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr11_-_23565843_23565958	0.265906	HNF4A_NR2F1,2.p2	AF329877|Pex13|72129|peroxisomal biogenesis factor 13	AJ304506|Pex13|72129|peroxisomal biogenesis factor 13	AK087918|Pex13|72129|peroxisomal biogenesis factor 13	AK153438|Pex13|72129|peroxisomal biogenesis factor 13	AK031975|Pex13|72129|peroxisomal biogenesis factor 13	AK011355|Pex13|72129|peroxisomal biogenesis factor 13	AK029099|Pex13|72129|peroxisomal biogenesis factor 13	AK029336|Pex13|72129|peroxisomal biogenesis factor 13	AK031710|Pex13|72129|peroxisomal biogenesis factor 13	NM_023651|Pex13|72129|peroxisomal biogenesis factor 13	BC023683|Pex13|72129|peroxisomal biogenesis factor 13	AK169148|Pex13|72129|peroxisomal biogenesis factor 13
mm9_v1_chr7_-_133939596_133939677	0.265881	HNF4A_NR2F1,2.p2	
mm9_v1_chr13_+_23844213_23844248	0.264992	HNF4A_NR2F1,2.p2	NM_178203|Hist1h3b|319150|histone cluster 1, H3b
mm9_v1_chr14_-_21475760_21475766	0.264144	HNF4A_NR2F1,2.p2	NM_021508|Myoz1|59011|myozenin 1
mm9_v1_chr4_+_149022081_149022141	0.263696	HNF4A_NR2F1,2.p2	AK007691|Clstn1|65945|calsyntenin 1
mm9_v1_chr4_-_133228520_133228564	0.263487	HNF4A_NR2F1,2.p2	AK046527|Pigv|230801|phosphatidylinositol glycan anchor biosynthesis, class V	AK052446|Pigv|230801|phosphatidylinositol glycan anchor biosynthesis, class V	AK148285|Pigv|230801|phosphatidylinositol glycan anchor biosynthesis, class V	AK080590|Pigv|230801|phosphatidylinositol glycan anchor biosynthesis, class V	NM_001145955|Pigv|230801|phosphatidylinositol glycan anchor biosynthesis, class V	NM_001145956|Pigv|230801|phosphatidylinositol glycan anchor biosynthesis, class V	NM_178698|Pigv|230801|phosphatidylinositol glycan anchor biosynthesis, class V
mm9_v1_chr18_-_24280308_24280378	0.263358	HNF4A_NR2F1,2.p2	BC056426|Ino80c|225280|INO80 complex subunit C	AK083718|Ino80c|225280|INO80 complex subunit C	NM_172625|Ino80c|225280|INO80 complex subunit C	AK077290|Ino80c|225280|INO80 complex subunit C	BC060961|Ino80c|225280|INO80 complex subunit C
mm9_v1_chr5_+_123526279_123526440	0.263277	HNF4A_NR2F1,2.p2	NM_001039723|Tmem120b|330189|transmembrane protein 120B	AK132283|Tmem120b|330189|transmembrane protein 120B	AK158123|Tmem120b|330189|transmembrane protein 120B	BC022593|Tmem120b|330189|transmembrane protein 120B	BC115785|Tmem120b|330189|transmembrane protein 120B	BC118014|Tmem120b|330189|transmembrane protein 120B	AK172110|Tmem120b|330189|transmembrane protein 120B
mm9_v1_chr2_-_91772424_91772438	0.262689	HNF4A_NR2F1,2.p2	AY864926|Mdk|17242|midkine	DQ323886|Mdk|17242|midkine	DQ323887|Mdk|17242|midkine	M34328|Mdk|17242|midkine	NM_010784|Mdk|17242|midkine
mm9_v1_chr7_-_150646758_150646786	0.262599	HNF4A_NR2F1,2.p2	U20553|Cdkn1c|12577|cyclin-dependent kinase inhibitor 1C (P57)
mm9_v1_chr6_+_48487648_48487719	0.261695	HNF4A_NR2F1,2.p2	AK077313|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2	AK002260|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2
mm9_v1_chr15_+_78778153_78778153	0.261417	HNF4A_NR2F1,2.p2	DQ228000|Triobp|110253|TRIO and F-actin binding protein	DQ228001|Triobp|110253|TRIO and F-actin binding protein	DQ228002|Triobp|110253|TRIO and F-actin binding protein	NM_001039155|Triobp|110253|TRIO and F-actin binding protein	NM_001039156|Triobp|110253|TRIO and F-actin binding protein	NM_138579|Triobp|110253|TRIO and F-actin binding protein
mm9_v1_chr4_+_115894518_115894602	0.260684	HNF4A_NR2F1,2.p2	BC053102|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	NM_181585|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)	AK031936|Pik3r3|18710|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm9_v1_chr2_+_164611444_164611546	0.260101	HNF4A_NR2F1,2.p2	AK017516|Snx21|101113|sorting nexin family member 21	AK141663|Snx21|101113|sorting nexin family member 21	NM_133924|Snx21|101113|sorting nexin family member 21	AK168473|Snx21|101113|sorting nexin family member 21
mm9_v1_chr19_+_16510156_16510251	0.256911	HNF4A_NR2F1,2.p2	NM_008137|Gna14|14675|guanine nucleotide binding protein, alpha 14	AK085444|Gna14|14675|guanine nucleotide binding protein, alpha 14
mm9_v1_chr18_+_75979831_75979868	0.25686	HNF4A_NR2F1,2.p2	BC070424|Zbtb7c|207259|zinc finger and BTB domain containing 7C	NM_145356|Zbtb7c|207259|zinc finger and BTB domain containing 7C	AK045522|Zbtb7c|207259|zinc finger and BTB domain containing 7C
mm9_v1_chr7_+_18557472_18557527	0.255882	HNF4A_NR2F1,2.p2	AF221099|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK004142|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK005432|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK005463|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	NM_023289|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK145847|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	BC099452|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11
mm9_v1_chr16_-_18343944_18344024	0.255474	HNF4A_NR2F1,2.p2	BC005445|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	AK089239|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	AK047383|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	AK133588|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed	NM_138583|D16H22S680E|27883|DNA segment, Chr 16, human D22S680E, expressed
mm9_v1_chr14_+_55713789_55713939	0.255316	HNF4A_NR2F1,2.p2	AF432864|Thtpa|105663|thiamine triphosphatase	AK085173|Thtpa|105663|thiamine triphosphatase	AK132479|Thtpa|105663|thiamine triphosphatase
mm9_v1_chr2_+_16277963_16277989	0.255238	HNF4A_NR2F1,2.p2	AK019482|Plxdc2|67448|plexin domain containing 2	AK154921|Plxdc2|67448|plexin domain containing 2
mm9_v1_chr5_-_31456576_31456630	0.25409	HNF4A_NR2F1,2.p2	BC013452|Mpv17|17527|MpV17 mitochondrial inner membrane protein	AK040477|Mpv17|17527|MpV17 mitochondrial inner membrane protein	M36411|Mpv17|17527|MpV17 mitochondrial inner membrane protein	NM_008622|Mpv17|17527|MpV17 mitochondrial inner membrane protein
mm9_v1_chr5_+_124889925_124890006	0.250871	HNF4A_NR2F1,2.p2	NM_030241|Setd8|67956|SET domain containing (lysine methyltransferase) 8	AK030904|Setd8|67956|SET domain containing (lysine methyltransferase) 8	AK088097|Setd8|67956|SET domain containing (lysine methyltransferase) 8	BC108333|Setd8|67956|SET domain containing (lysine methyltransferase) 8
mm9_v1_chr9_-_50425371_50425373	0.248778	HNF4A_NR2F1,2.p2	AK133777|AU019823|270156|expressed sequence AU019823
mm9_v1_chr17_+_12777054_12777126	0.24841	HNF4A_NR2F1,2.p2	AJ006036|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	NM_013667|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK143892|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK052658|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC069911|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC015250|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2
mm9_v1_chr10_-_80828534_80828564	0.247504	HNF4A_NR2F1,2.p2	AK015088|4930404N11Rik|432479|RIKEN cDNA 4930404N11 gene	BC049656|4930404N11Rik|432479|RIKEN cDNA 4930404N11 gene	BC139256|4930404N11Rik|432479|RIKEN cDNA 4930404N11 gene	BC145589|4930404N11Rik|432479|RIKEN cDNA 4930404N11 gene	BC145960|4930404N11Rik|432479|RIKEN cDNA 4930404N11 gene	NM_001014836|4930404N11Rik|432479|RIKEN cDNA 4930404N11 gene
mm9_v1_chr17_+_29455821_29455826	0.246279	HNF4A_NR2F1,2.p2	AK157854|Pi16|74116|peptidase inhibitor 16	AK158339|Pi16|74116|peptidase inhibitor 16	NM_023734|Pi16|74116|peptidase inhibitor 16
mm9_v1_chr12_+_103707313_103707368	0.246101	HNF4A_NR2F1,2.p2	AK138455|Golga5|27277|golgi autoantigen, golgin subfamily a, 5	NM_001199004|Golga5|27277|golgi autoantigen, golgin subfamily a, 5	AB016784|Golga5|27277|golgi autoantigen, golgin subfamily a, 5
mm9_v1_chr16_-_4789869_4789937	0.245876	HNF4A_NR2F1,2.p2	AK017480|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene	AK005157|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene	BC004063|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene	AK149939|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene	AK150219|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene	AK051560|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene	AK031705|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene	NM_025670|5730403B10Rik|66626|RIKEN cDNA 5730403B10 gene
mm9_v1_chr7_-_74367343_74367421	0.244423	HNF4A_NR2F1,2.p2	AK038598|1700112J16Rik|76628|RIKEN cDNA 1700112J16 gene
mm9_v1_chr5_+_130263548_130263603	0.243651	HNF4A_NR2F1,2.p2	AK199226|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr5_+_31216131_31216188	0.242435	HNF4A_NR2F1,2.p2	AK138020|Emilin1|100952|elastin microfibril interfacer 1	BC005481|Emilin1|100952|elastin microfibril interfacer 1	NM_133918|Emilin1|100952|elastin microfibril interfacer 1	AK029337|Emilin1|100952|elastin microfibril interfacer 1
mm9_v1_chr6_-_113669870_113669904	0.242417	HNF4A_NR2F1,2.p2	BC132230|Ghrl|58991|ghrelin	BC132232|Ghrl|58991|ghrelin	AK008658|Ghrl|58991|ghrelin	AK008860|Ghrl|58991|ghrelin	NM_021488|Ghrl|58991|ghrelin	FJ355945|Ghrl|58991|ghrelin	FJ355944|Ghrl|58991|ghrelin
mm9_v1_chr13_+_46597461_46597559	0.242135	HNF4A_NR2F1,2.p2	AK049813|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	BC050752|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK013331|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK033071|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)	AK010235|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr9_-_121767026_121767117	0.240382	HNF4A_NR2F1,2.p2	NM_019814|Higd1a|56295|HIG1 domain family, member 1A
mm9_v1_chr15_+_101904294_101904371	0.240039	HNF4A_NR2F1,2.p2	BC147746|Eif4b|75705|eukaryotic translation initiation factor 4B	BC147748|Eif4b|75705|eukaryotic translation initiation factor 4B	AK077423|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170256|Eif4b|75705|eukaryotic translation initiation factor 4B	AK148012|Eif4b|75705|eukaryotic translation initiation factor 4B	AK163266|Eif4b|75705|eukaryotic translation initiation factor 4B	AK166363|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168425|Eif4b|75705|eukaryotic translation initiation factor 4B	AK168350|Eif4b|75705|eukaryotic translation initiation factor 4B	AK045250|Eif4b|75705|eukaryotic translation initiation factor 4B	BC036293|Eif4b|75705|eukaryotic translation initiation factor 4B	AK161693|Eif4b|75705|eukaryotic translation initiation factor 4B	AK170354|Eif4b|75705|eukaryotic translation initiation factor 4B
mm9_v1_chr16_-_17531116_17531168	0.239988	HNF4A_NR2F1,2.p2	BC018221|Thap7|69009|THAP domain containing 7	NM_026909|Thap7|69009|THAP domain containing 7
mm9_v1_chr7_+_149627709_149627734	0.238063	HNF4A_NR2F1,2.p2	BC028515|Tnni2|21953|troponin I, skeletal, fast 2
mm9_v1_chr11_+_100488707_100488855	0.237018	HNF4A_NR2F1,2.p2	AK201688|Nkiras2|71966|NFKB inhibitor interacting Ras-like protein 2
mm9_v1_chr11_-_101036732_101036756	0.235422	HNF4A_NR2F1,2.p2	AF215983|Ccr10|12777|chemokine (C-C motif) receptor 10	AF208238|Ccr10|12777|chemokine (C-C motif) receptor 10	AF215982|Ccr10|12777|chemokine (C-C motif) receptor 10	AK090044|Ccr10|12777|chemokine (C-C motif) receptor 10	BC117043|Ccr10|12777|chemokine (C-C motif) receptor 10	BC120542|Ccr10|12777|chemokine (C-C motif) receptor 10	NM_007721|Ccr10|12777|chemokine (C-C motif) receptor 10
mm9_v1_chr10_-_90586663_90586709	0.235008	HNF4A_NR2F1,2.p2	BC004030|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK077274|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK152341|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK168580|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	NM_133668|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chr3_+_90035515_90035692	0.233584	HNF4A_NR2F1,2.p2	AK146337|Jtb|23922|jumping translocation breakpoint	NM_206924|Jtb|23922|jumping translocation breakpoint	BC008139|Jtb|23922|jumping translocation breakpoint	AB016490|Jtb|23922|jumping translocation breakpoint	AK004469|Jtb|23922|jumping translocation breakpoint	AK089048|Jtb|23922|jumping translocation breakpoint
mm9_v1_chr2_+_72018059_72018093	0.233293	HNF4A_NR2F1,2.p2	AK004874|Rapgef4|56508|Rap guanine nucleotide exchange factor (GEF) 4
mm9_v1_chr11_+_68912444_68912492	0.233039	HNF4A_NR2F1,2.p2	NM_011065|Per1|18626|period homolog 1 (Drosophila)	BC091645|Per1|18626|period homolog 1 (Drosophila)
mm9_v1_chr5_+_137463234_137463356	0.23157	HNF4A_NR2F1,2.p2	AK053320|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK013195|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK033360|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK157741|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr11_-_5662259_5662400	0.230503	HNF4A_NR2F1,2.p2	BC066994|Urgcp|72046|upregulator of cell proliferation	AK035580|Urgcp|72046|upregulator of cell proliferation	AK041953|Urgcp|72046|upregulator of cell proliferation	NM_001077661|Urgcp|72046|upregulator of cell proliferation	AK037923|Urgcp|72046|upregulator of cell proliferation	AK053862|Urgcp|72046|upregulator of cell proliferation
mm9_v1_chr16_-_22163035_22163154	0.230257	HNF4A_NR2F1,2.p2	AY531659|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK077404|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	BC023758|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK049196|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	BC054552|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2	AK159654|Igf2bp2|319765|insulin-like growth factor 2 mRNA binding protein 2
mm9_v1_chr13_-_61265507_61265616	0.22973	HNF4A_NR2F1,2.p2	AY014778|Ctsr|56835|cathepsin R	BC100338|Ctsr|56835|cathepsin R	AF245399|Ctsr|56835|cathepsin R	NM_020284|Ctsr|56835|cathepsin R	AK014432|Ctsr|56835|cathepsin R	AK005429|Ctsr|56835|cathepsin R	AY943668|Ctsr|56835|cathepsin R
mm9_v1_chr2_-_25211822_25211914	0.229263	HNF4A_NR2F1,2.p2	AF285235|Dpp7|83768|dipeptidylpeptidase 7	AK028293|Dpp7|83768|dipeptidylpeptidase 7	BC027205|Dpp7|83768|dipeptidylpeptidase 7	NM_031843|Dpp7|83768|dipeptidylpeptidase 7	AK154193|Dpp7|83768|dipeptidylpeptidase 7	BC052861|Dpp7|83768|dipeptidylpeptidase 7	AK140406|Dpp7|83768|dipeptidylpeptidase 7	AK140420|Dpp7|83768|dipeptidylpeptidase 7
mm9_v1_chr11_+_51076626_51076703	0.22898	HNF4A_NR2F1,2.p2	NM_007714|Clk4|12750|CDC like kinase 4	BC012675|Clk4|12750|CDC like kinase 4	AK013974|Clk4|12750|CDC like kinase 4	U94846|Clk4|12750|CDC like kinase 4	AF033566|Clk4|12750|CDC like kinase 4
mm9_v1_chr10_-_82085802_82085872	0.228724	HNF4A_NR2F1,2.p2	BC038652|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	BC065417|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	AK004515|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene	AK045413|1190007I07Rik|544717|RIKEN cDNA 1190007I07 gene
mm9_v1_chr11_-_51076452_51076683	0.228546	HNF4A_NR2F1,2.p2	AK076829|BC049762|193286|cDNA sequence BC049762	NM_177567|BC049762|193286|cDNA sequence BC049762	BC049762|BC049762|193286|cDNA sequence BC049762	AK154967|BC049762|193286|cDNA sequence BC049762
mm9_v1_chrX_+_34335642_34335646	0.227093	HNF4A_NR2F1,2.p2	U27316|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK003467|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	NM_007451|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr13_+_63341348_63341411	0.227049	HNF4A_NR2F1,2.p2	AK167772|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	AK076298|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC006061|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC065422|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC064132|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene
mm9_v1_chr4_-_58566362_58566472	0.226103	HNF4A_NR2F1,2.p2	NM_010336|Lpar1|14745|lysophosphatidic acid receptor 1	U70622|Lpar1|14745|lysophosphatidic acid receptor 1
mm9_v1_chr15_+_76173936_76173991	0.224162	HNF4A_NR2F1,2.p2	AK011288|Cyc1|66445|cytochrome c-1	NM_025567|Cyc1|66445|cytochrome c-1	AK151299|Cyc1|66445|cytochrome c-1	AK170272|Cyc1|66445|cytochrome c-1	BC005620|Cyc1|66445|cytochrome c-1	AK002815|Cyc1|66445|cytochrome c-1	BC082790|Cyc1|66445|cytochrome c-1
mm9_v1_chr6_-_71773747_71773805	0.224154	HNF4A_NR2F1,2.p2	AK039187|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010369|Mrpl35|66223|mitochondrial ribosomal protein L35	AK012807|Mrpl35|66223|mitochondrial ribosomal protein L35	AK004385|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010223|Mrpl35|66223|mitochondrial ribosomal protein L35	BC028750|Mrpl35|66223|mitochondrial ribosomal protein L35	NM_025430|Mrpl35|66223|mitochondrial ribosomal protein L35
mm9_v1_chr4_+_102791890_102792040	0.224032	HNF4A_NR2F1,2.p2	AK143201|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AK138876|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	NM_001039081|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AK168693|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	BC108273|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis	AY769437|Mier1|71148|mesoderm induction early response 1 homolog (Xenopus laevis
mm9_v1_chr16_-_45158709_45158787	0.223928	HNF4A_NR2F1,2.p2	AK030566|Slc35a5|74102|solute carrier family 35, member A5	AK003124|Slc35a5|74102|solute carrier family 35, member A5	AK052833|Slc35a5|74102|solute carrier family 35, member A5	BC011115|Slc35a5|74102|solute carrier family 35, member A5	AK085567|Slc35a5|74102|solute carrier family 35, member A5	AK033921|Slc35a5|74102|solute carrier family 35, member A5	AK170026|Slc35a5|74102|solute carrier family 35, member A5	AK034527|Slc35a5|74102|solute carrier family 35, member A5	AK150825|Slc35a5|74102|solute carrier family 35, member A5	AK151484|Slc35a5|74102|solute carrier family 35, member A5	NM_028756|Slc35a5|74102|solute carrier family 35, member A5
mm9_v1_chr2_-_25978296_25978309	0.221	HNF4A_NR2F1,2.p2	BC022103|Nacc2|67991|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing	AK002651|Nacc2|67991|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm9_v1_chr17_+_47506145_47506145	0.217571	HNF4A_NR2F1,2.p2	BC048912|Mrps10|64657|mitochondrial ribosomal protein S10	NM_183086|Mrps10|64657|mitochondrial ribosomal protein S10
mm9_v1_chr7_+_107621474_107621532	0.215579	HNF4A_NR2F1,2.p2	BC098234|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	AB010742|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	NM_009464|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	BC055901|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	AF032902|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)	AF053352|Ucp3|22229|uncoupling protein 3 (mitochondrial, proton carrier)
mm9_v1_chr8_+_87213209_87213224	0.214381	HNF4A_NR2F1,2.p2	AK032945|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr14_+_35487052_35487113	0.213966	HNF4A_NR2F1,2.p2	AK046038|Wapal|218914|wings apart-like homolog (Drosophila)	AK129105|Wapal|218914|wings apart-like homolog (Drosophila)	NM_001004436|Wapal|218914|wings apart-like homolog (Drosophila)
mm9_v1_chr13_+_46597448_46597458	0.213945	HNF4A_NR2F1,2.p2	BC057937|Cap2|67252|CAP, adenylate cyclase-associated protein, 2 (yeast)
mm9_v1_chr18_+_38456280_38456312	0.212466	HNF4A_NR2F1,2.p2	NM_001164622|Rnf14|56736|ring finger protein 14	NM_020012|Rnf14|56736|ring finger protein 14
mm9_v1_chr10_-_114688480_114688548	0.211647	HNF4A_NR2F1,2.p2	AK014477|Tbc1d15|66687|TBC1 domain family, member 15	AK078875|Tbc1d15|66687|TBC1 domain family, member 15	AK147085|Tbc1d15|66687|TBC1 domain family, member 15	BC053395|Tbc1d15|66687|TBC1 domain family, member 15	NM_025706|Tbc1d15|66687|TBC1 domain family, member 15
mm9_v1_chr1_-_135803531_135803749	0.210421	HNF4A_NR2F1,2.p2	AK053318|Optc|269120|opticin	BC099435|Optc|269120|opticin	BC115928|Optc|269120|opticin	AY077682|Optc|269120|opticin	AF333980|Optc|269120|opticin	NM_001160421|Optc|269120|opticin	NM_001160422|Optc|269120|opticin	NM_054076|Optc|269120|opticin
mm9_v1_chr9_+_40590943_40591093	0.210387	HNF4A_NR2F1,2.p2	AK033766|9030425E11Rik|71566|RIKEN cDNA 9030425E11 gene
mm9_v1_chr16_+_45159173_45159221	0.209157	HNF4A_NR2F1,2.p2	AB079386|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr6_-_69557773_69557830	0.208132	HNF4A_NR2F1,2.p2	
mm9_v1_chr18_+_38456315_38456361	0.207806	HNF4A_NR2F1,2.p2	AK009783|Rnf14|56736|ring finger protein 14	AK010162|Rnf14|56736|ring finger protein 14	BC094250|Rnf14|56736|ring finger protein 14	AF249667|Rnf14|56736|ring finger protein 14	AK038986|Rnf14|56736|ring finger protein 14	BC054841|Rnf14|56736|ring finger protein 14
mm9_v1_chr16_-_35871459_35871582	0.207315	HNF4A_NR2F1,2.p2	AK005563|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK089685|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156483|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156593|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	NM_001039530|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC138874|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC145452|Parp14|547253|poly (ADP-ribose) polymerase family, member 14
mm9_v1_chr7_-_125635435_125635488	0.205615	HNF4A_NR2F1,2.p2	AK134593|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK137678|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	NM_001033380|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chr12_-_16807691_16807691	0.204814	HNF4A_NR2F1,2.p2	NM_015764|Greb1|268527|gene regulated by estrogen in breast cancer protein
mm9_v1_chr18_-_60908267_60908331	0.204665	HNF4A_NR2F1,2.p2	AK147282|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	AK035642|Ndst1|15531|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm9_v1_chr10_+_62801950_62801991	0.204428	HNF4A_NR2F1,2.p2	AK044604|Gm10114|791398|predicted gene 10114
mm9_v1_chr14_+_56178853_56178921	0.203414	HNF4A_NR2F1,2.p2	NM_133734|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK033540|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK170657|Dcaf11|28199|DDB1 and CUL4 associated factor 11	AK158784|Dcaf11|28199|DDB1 and CUL4 associated factor 11
mm9_v1_chr10_-_79792197_79792217	0.20206	HNF4A_NR2F1,2.p2	AK161504|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4	D01093|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4	NM_008793|Pcsk4|18551|proprotein convertase subtilisin/kexin type 4
mm9_v1_chr11_+_59021811_59021915	0.198737	HNF4A_NR2F1,2.p2	AK012628|2310033P09Rik|67862|RIKEN cDNA 2310033P09 gene	NM_024210|2310033P09Rik|67862|RIKEN cDNA 2310033P09 gene	BC002181|2310033P09Rik|67862|RIKEN cDNA 2310033P09 gene	AK009601|2310033P09Rik|67862|RIKEN cDNA 2310033P09 gene
mm9_v1_chr8_-_26149352_26149433	0.196784	HNF4A_NR2F1,2.p2	AK046614|Htra4|330723|HtrA serine peptidase 4	BC132380|Htra4|330723|HtrA serine peptidase 4	BC145842|Htra4|330723|HtrA serine peptidase 4	NM_001081187|Htra4|330723|HtrA serine peptidase 4
mm9_v1_chr9_+_65308712_65308803	0.196779	HNF4A_NR2F1,2.p2	AK150215|Spg21|27965|spastic paraplegia 21 homolog (human)	NM_138584|Spg21|27965|spastic paraplegia 21 homolog (human)	AK009332|Spg21|27965|spastic paraplegia 21 homolog (human)	AK170666|Spg21|27965|spastic paraplegia 21 homolog (human)	AK090017|Spg21|27965|spastic paraplegia 21 homolog (human)	AK150581|Spg21|27965|spastic paraplegia 21 homolog (human)	BC132377|Spg21|27965|spastic paraplegia 21 homolog (human)	BC132403|Spg21|27965|spastic paraplegia 21 homolog (human)	AK149930|Spg21|27965|spastic paraplegia 21 homolog (human)	AK011985|Spg21|27965|spastic paraplegia 21 homolog (human)	AK153284|Spg21|27965|spastic paraplegia 21 homolog (human)
mm9_v1_chr8_+_97835414_97835512	0.194764	HNF4A_NR2F1,2.p2	NM_199455|Tepp|73407|testis, prostate and placenta expressed	BC104382|Tepp|73407|testis, prostate and placenta expressed	BC104383|Tepp|73407|testis, prostate and placenta expressed	BC087870|Tepp|73407|testis, prostate and placenta expressed	AK006802|Tepp|73407|testis, prostate and placenta expressed	NM_028532|Tepp|73407|testis, prostate and placenta expressed
mm9_v1_chr17_+_35213886_35214099	0.194111	HNF4A_NR2F1,2.p2	NM_027366|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AK009303|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	BC132420|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	BC138777|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AJ315550|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E	AJ315551|Ly6g6e|70274|lymphocyte antigen 6 complex, locus G6E
mm9_v1_chr4_+_125939573_125939621	0.193954	HNF4A_NR2F1,2.p2	AK168518|Trappc3|27096|trafficking protein particle complex 3
mm9_v1_chr13_+_100114738_100114812	0.192045	HNF4A_NR2F1,2.p2	AK076008|Mrps27|218506|mitochondrial ribosomal protein S27	NM_173757|Mrps27|218506|mitochondrial ribosomal protein S27	AK087686|Mrps27|218506|mitochondrial ribosomal protein S27	BC049149|Mrps27|218506|mitochondrial ribosomal protein S27
mm9_v1_chr10_-_90586710_90586722	0.192013	HNF4A_NR2F1,2.p2	AK152006|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK088013|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK150641|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK150729|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK151088|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK151518|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK151887|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK152292|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK152713|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	AK167197|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	BC018161|Slc25a3|18674|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm9_v1_chrX_+_98644445_98644450	0.191952	HNF4A_NR2F1,2.p2	AK003906|Itgb1bp2|26549|integrin beta 1 binding protein 2	NM_013712|Itgb1bp2|26549|integrin beta 1 binding protein 2
mm9_v1_chr15_-_78971563_78971688	0.191122	HNF4A_NR2F1,2.p2	BC068203|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC096672|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC116891|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC116893|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC144714|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	BC144715|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK030004|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK006539|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	AK007028|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene	NM_138581|1700088E04Rik|27660|RIKEN cDNA 1700088E04 gene
mm9_v1_chr1_+_74708306_74708411	0.19081	HNF4A_NR2F1,2.p2	BC085151|Ttll4|67534|tubulin tyrosine ligase-like family, member 4	NM_001014974|Ttll4|67534|tubulin tyrosine ligase-like family, member 4
mm9_v1_chr3_+_88342459_88342597	0.189791	HNF4A_NR2F1,2.p2	AK012557|Mex3a|72640|mex3 homolog A (C. elegans)
mm9_v1_chr16_-_31274947_31275377	0.188892	HNF4A_NR2F1,2.p2	AK015349|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK053657|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC069886|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK002671|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK032462|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK028603|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC069885|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	AK150281|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_025800|Ppp1r2|66849|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm9_v1_chr11_+_85166665_85166722	0.187993	HNF4A_NR2F1,2.p2	NM_001166642|Bcas3|192197|breast carcinoma amplified sequence 3	NM_001166643|Bcas3|192197|breast carcinoma amplified sequence 3	NM_138681|Bcas3|192197|breast carcinoma amplified sequence 3	AK034117|Bcas3|192197|breast carcinoma amplified sequence 3	AF313800|Bcas3|192197|breast carcinoma amplified sequence 3	BC050233|Bcas3|192197|breast carcinoma amplified sequence 3	AK160127|Bcas3|192197|breast carcinoma amplified sequence 3	BC028339|Bcas3|192197|breast carcinoma amplified sequence 3	BC086693|Bcas3|192197|breast carcinoma amplified sequence 3	BC060690|Bcas3|192197|breast carcinoma amplified sequence 3	AK171964|Bcas3|192197|breast carcinoma amplified sequence 3	AK032423|Bcas3|192197|breast carcinoma amplified sequence 3	AK157222|Bcas3|192197|breast carcinoma amplified sequence 3	BC038173|Bcas3|192197|breast carcinoma amplified sequence 3
mm9_v1_chr7_-_52184840_52184904	0.186805	HNF4A_NR2F1,2.p2	NM_001077264|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit	NM_007458|Ap2a1|11771|adaptor protein complex AP-2, alpha 1 subunit
mm9_v1_chr2_+_84910387_84910514	0.186526	HNF4A_NR2F1,2.p2	BC025657|Tnks1bp1|228140|tankyrase 1 binding protein 1
mm9_v1_chr7_-_20408063_20408067	0.18469	HNF4A_NR2F1,2.p2	AF067774|Bcl3|12051|B-cell leukemia/lymphoma 3	AK155016|Bcl3|12051|B-cell leukemia/lymphoma 3
mm9_v1_chr7_-_28835041_28835115	0.184449	HNF4A_NR2F1,2.p2	BC012708|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167041|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	BC092265|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	L76223|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK150989|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160718|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK167528|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169224|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK077507|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK160644|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK169244|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK050677|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	AK153991|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4	NM_011874|Psmc4|23996|proteasome (prosome, macropain) 26S subunit, ATPase, 4
mm9_v1_chr2_+_74714444_74714447	0.184422	HNF4A_NR2F1,2.p2	AK212919|Mtx2|53375|metaxin 2
mm9_v1_chr7_-_31017047_31017047	0.183243	HNF4A_NR2F1,2.p2	NM_025548|Tbcb|66411|tubulin folding cofactor B
mm9_v1_chr11_+_78002249_78002305	0.183235	HNF4A_NR2F1,2.p2	NM_033475|Rab34|19376|RAB34, member of RAS oncogene family	BC028481|Rab34|19376|RAB34, member of RAS oncogene family	AK160308|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr11_+_88017882_88017939	0.183234	HNF4A_NR2F1,2.p2	NM_024174|Mrps23|64656|mitochondrial ribosomal protein S23	AK014375|Mrps23|64656|mitochondrial ribosomal protein S23	BC019980|Mrps23|64656|mitochondrial ribosomal protein S23	AK168051|Mrps23|64656|mitochondrial ribosomal protein S23	AK009880|Mrps23|64656|mitochondrial ribosomal protein S23	AK168277|Mrps23|64656|mitochondrial ribosomal protein S23	BC002155|Mrps23|64656|mitochondrial ribosomal protein S23
mm9_v1_chr19_+_9022763_9022826	0.1832	HNF4A_NR2F1,2.p2	AK003701|Mta2|23942|metastasis-associated gene family, member 2	AK186547|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr4_+_138387771_138387792	0.183094	HNF4A_NR2F1,2.p2	AK131857|Pla2g2a|18780|phospholipase A2, group IIA (platelets, synovial fluid)	X74266|Pla2g2a|18780|phospholipase A2, group IIA (platelets, synovial fluid)	BC045156|Pla2g2a|18780|phospholipase A2, group IIA (platelets, synovial fluid)	NM_001082531|Pla2g2a|18780|phospholipase A2, group IIA (platelets, synovial fluid)	U28244|Pla2g2a|18780|phospholipase A2, group IIA (platelets, synovial fluid)
mm9_v1_chr1_+_174628164_174628196	0.181201	HNF4A_NR2F1,2.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chr11_-_69734369_69734464	0.180675	HNF4A_NR2F1,2.p2	AY129328|Eif5a|276770|eukaryotic translation initiation factor 5A	AY129329|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166592|Eif5a|276770|eukaryotic translation initiation factor 5A	NM_001166594|Eif5a|276770|eukaryotic translation initiation factor 5A
mm9_v1_chr19_+_53977901_53977958	0.180167	HNF4A_NR2F1,2.p2	BC055739|Pdcd4|18569|programmed cell death 4	D86344|Pdcd4|18569|programmed cell death 4
mm9_v1_chr15_+_78939582_78939674	0.179768	HNF4A_NR2F1,2.p2	AK031386|Micall1|27008|microtubule associated monoxygenase, calponin and LIM domain containing -like 1	AK129419|Micall1|27008|microtubule associated monoxygenase, calponin and LIM domain containing -like 1
mm9_v1_chr13_+_37918780_37918800	0.179525	HNF4A_NR2F1,2.p2	NM_001177868|Rreb1|68750|ras responsive element binding protein 1	AK047047|Rreb1|68750|ras responsive element binding protein 1	AK047251|Rreb1|68750|ras responsive element binding protein 1	AK171375|Rreb1|68750|ras responsive element binding protein 1
mm9_v1_chr2_-_132073389_132073439	0.179492	HNF4A_NR2F1,2.p2	BC080755|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene
mm9_v1_chr15_+_74545268_74545281	0.179368	HNF4A_NR2F1,2.p2	AK008851|Psca|72373|prostate stem cell antigen	BC110462|Psca|72373|prostate stem cell antigen	NM_028216|Psca|72373|prostate stem cell antigen	AF319173|Psca|72373|prostate stem cell antigen
mm9_v1_chr4_-_155043283_155043335	0.178438	HNF4A_NR2F1,2.p2	AK147940|Mib2|76580|mindbomb homolog 2 (Drosophila)	AK081738|Mib2|76580|mindbomb homolog 2 (Drosophila)	NM_145124|Mib2|76580|mindbomb homolog 2 (Drosophila)
mm9_v1_chr7_+_38968235_38968304	0.177106	HNF4A_NR2F1,2.p2	NM_001085385|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene	BC019834|1600014C10Rik|72244|RIKEN cDNA 1600014C10 gene
mm9_v1_chr5_-_134790277_134790348	0.176552	HNF4A_NR2F1,2.p2	BC047387|Gtf2i|14886|general transcription factor II I
mm9_v1_chr12_-_102321835_102321908	0.176052	HNF4A_NR2F1,2.p2	AK051239|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK031629|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK156272|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK152480|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr10_+_77888414_77888501	0.17546	HNF4A_NR2F1,2.p2	NM_007793|Cstb|13014|cystatin B	AK002403|Cstb|13014|cystatin B	BC056170|Cstb|13014|cystatin B	AK151205|Cstb|13014|cystatin B
mm9_v1_chr19_+_29064938_29065019	0.174498	HNF4A_NR2F1,2.p2	AK078872|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK161465|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK018787|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK080238|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK012312|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	NM_025950|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	BC031761|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK038578|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1	AK079556|Cdc37l1|67072|cell division cycle 37 homolog (S. cerevisiae)-like 1
mm9_v1_chr3_+_129883794_129883901	0.174175	HNF4A_NR2F1,2.p2	NM_029838|Col25a1|77018|collagen, type XXV, alpha 1	NM_198711|Col25a1|77018|collagen, type XXV, alpha 1	AK035562|Col25a1|77018|collagen, type XXV, alpha 1	AK085241|Col25a1|77018|collagen, type XXV, alpha 1	BC024329|Col25a1|77018|collagen, type XXV, alpha 1	BC138051|Col25a1|77018|collagen, type XXV, alpha 1
mm9_v1_chr14_-_58535467_58535641	0.173262	HNF4A_NR2F1,2.p2	AK215594|Efha1|68514|EF hand domain family A1	AK219744|Efha1|68514|EF hand domain family A1	AK218511|Efha1|68514|EF hand domain family A1	AK180563|Efha1|68514|EF hand domain family A1	AK208098|Efha1|68514|EF hand domain family A1	AK218370|Efha1|68514|EF hand domain family A1	AK218406|Efha1|68514|EF hand domain family A1	AK218526|Efha1|68514|EF hand domain family A1
mm9_v1_chr4_-_114659706_114659870	0.173094	HNF4A_NR2F1,2.p2	AK004827|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK146436|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK002526|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	BC017684|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK162173|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK150162|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	NM_025647|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1	AK077534|Cmpk1|66588|cytidine monophosphate (UMP-CMP) kinase 1
mm9_v1_chr6_+_48487567_48487613	0.171728	HNF4A_NR2F1,2.p2	NM_133764|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2	BC010790|Atp6v0e2|76252|ATPase, H+ transporting, lysosomal V0 subunit E2
mm9_v1_chr11_+_115761444_115761621	0.170197	HNF4A_NR2F1,2.p2	NM_183259|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	AK020450|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	AK004370|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene	BC065414|2210020M01Rik|66528|RIKEN cDNA 2210020M01 gene
mm9_v1_chr5_+_137467443_137467452	0.170161	HNF4A_NR2F1,2.p2	AK180845|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	AK217183|Plod3|26433|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm9_v1_chr14_-_65716932_65716942	0.169956	HNF4A_NR2F1,2.p2	NM_018788|Extl3|54616|exostoses (multiple)-like 3
mm9_v1_chr3_-_40886957_40886982	0.169416	HNF4A_NR2F1,2.p2	NM_027558|Pgrmc2|70804|progesterone receptor membrane component 2
mm9_v1_chr14_+_21493519_21493615	0.168781	HNF4A_NR2F1,2.p2	AK036519|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_001168273|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	NM_172596|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK011880|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	AK122199|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)	BC040370|Sec24c|218811|Sec24 related gene family, member C (S. cerevisiae)
mm9_v1_chr16_-_58523606_58523870	0.168586	HNF4A_NR2F1,2.p2	AK028442|St3gal6|54613|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	AK006263|St3gal6|54613|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	BC026197|St3gal6|54613|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm9_v1_chr19_+_53966720_53966720	0.167093	HNF4A_NR2F1,2.p2	AK134366|Pdcd4|18569|programmed cell death 4	NM_011050|Pdcd4|18569|programmed cell death 4
mm9_v1_chr18_+_38456364_38456458	0.16635	HNF4A_NR2F1,2.p2	AK011316|Rnf14|56736|ring finger protein 14	BC049079|Rnf14|56736|ring finger protein 14	NM_001164621|Rnf14|56736|ring finger protein 14
mm9_v1_chr1_-_74647935_74647979	0.165237	HNF4A_NR2F1,2.p2	BC022715|Rnf25|57751|ring finger protein 25	AK171752|Rnf25|57751|ring finger protein 25	AF171060|Rnf25|57751|ring finger protein 25	BC037100|Rnf25|57751|ring finger protein 25	BC048821|Rnf25|57751|ring finger protein 25	AK002399|Rnf25|57751|ring finger protein 25	NM_021313|Rnf25|57751|ring finger protein 25
mm9_v1_chr8_-_108351060_108351249	0.165078	HNF4A_NR2F1,2.p2	AK173177|Ranbp10|74334|RAN binding protein 10	BC024698|Ranbp10|74334|RAN binding protein 10	AK048772|Ranbp10|74334|RAN binding protein 10	EU281316|Ranbp10|74334|RAN binding protein 10	AY337314|Ranbp10|74334|RAN binding protein 10	NM_145824|Ranbp10|74334|RAN binding protein 10
mm9_v1_chr4_+_100151471_100151479	0.162456	HNF4A_NR2F1,2.p2	AK133379|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	NM_001033773|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150880|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150888|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC172031|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)
mm9_v1_chr4_-_108079288_108079333	0.160995	HNF4A_NR2F1,2.p2	AK004091|Gpx7|67305|glutathione peroxidase 7	AK014199|Gpx7|67305|glutathione peroxidase 7	AK084382|Gpx7|67305|glutathione peroxidase 7	AK165221|Gpx7|67305|glutathione peroxidase 7	NM_024198|Gpx7|67305|glutathione peroxidase 7	BC003228|Gpx7|67305|glutathione peroxidase 7
mm9_v1_chr8_-_23235509_23235538	0.16043	HNF4A_NR2F1,2.p2	AK165108|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	BC053516|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK032672|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	NM_177898|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5	AK054168|Nek5|330721|NIMA (never in mitosis gene a)-related expressed kinase 5
mm9_v1_chr2_+_101726413_101726444	0.158909	HNF4A_NR2F1,2.p2	AK154731|Commd9|76501|COMM domain containing 9	AK007640|Commd9|76501|COMM domain containing 9	NM_029635|Commd9|76501|COMM domain containing 9	BC060058|Commd9|76501|COMM domain containing 9	BC030374|Commd9|76501|COMM domain containing 9	BC040688|Commd9|76501|COMM domain containing 9	BC043684|Commd9|76501|COMM domain containing 9
mm9_v1_chr9_+_3532302_3532353	0.158055	HNF4A_NR2F1,2.p2	NM_001033322|Gucy1a2|234889|guanylate cyclase 1, soluble, alpha 2
mm9_v1_chr2_+_152737083_152737087	0.157225	HNF4A_NR2F1,2.p2	AK079396|Mylk2|228785|myosin, light polypeptide kinase 2, skeletal muscle	NM_001081044|Mylk2|228785|myosin, light polypeptide kinase 2, skeletal muscle
mm9_v1_chr8_+_87604638_87604668	0.156154	HNF4A_NR2F1,2.p2	AK147129|BC056474|414077|cDNA sequence BC056474
mm9_v1_chr2_+_173563060_173563229	0.154751	HNF4A_NR2F1,2.p2	BC048231|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	NM_019806|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	BC057123|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK050632|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK081908|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AF115504|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK160925|Vapb|56491|vesicle-associated membrane protein, associated protein B and C	AK172080|Vapb|56491|vesicle-associated membrane protein, associated protein B and C
mm9_v1_chr3_+_89240625_89240684	0.154263	HNF4A_NR2F1,2.p2	NM_146131|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK028858|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159422|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159448|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK160103|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK159633|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK028754|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	BC027771|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	AK170318|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1	BC034200|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1
mm9_v1_chr2_-_73150559_73150757	0.154254	HNF4A_NR2F1,2.p2	AK006260|Cir1|66935|corepressor interacting with RBPJ, 1	BC061077|Cir1|66935|corepressor interacting with RBPJ, 1	BC094283|Cir1|66935|corepressor interacting with RBPJ, 1	BC089602|Cir1|66935|corepressor interacting with RBPJ, 1	AK008242|Cir1|66935|corepressor interacting with RBPJ, 1	BC099444|Cir1|66935|corepressor interacting with RBPJ, 1	AK131674|Cir1|66935|corepressor interacting with RBPJ, 1	NM_025854|Cir1|66935|corepressor interacting with RBPJ, 1	BC012219|Cir1|66935|corepressor interacting with RBPJ, 1
mm9_v1_chr3_-_33980178_33980268	0.152352	HNF4A_NR2F1,2.p2	BC024335|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	BC020327|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK008267|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK010204|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK012051|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK076602|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	AK007866|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	NM_001026211|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19	NM_026332|Dnajc19|67713|DnaJ (Hsp40) homolog, subfamily C, member 19
mm9_v1_chr3_-_89017811_89017848	0.151414	HNF4A_NR2F1,2.p2	AK163982|Mtx1|17827|metaxin 1	AK165547|Mtx1|17827|metaxin 1	L36962|Mtx1|17827|metaxin 1	BC023071|Mtx1|17827|metaxin 1	AK159316|Mtx1|17827|metaxin 1	AK165923|Mtx1|17827|metaxin 1	L10897|Mtx1|17827|metaxin 1	AK086135|Mtx1|17827|metaxin 1
mm9_v1_chr18_+_35758269_35758376	0.151155	HNF4A_NR2F1,2.p2	AK146327|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK167545|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK169207|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK169411|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK154453|Paip2|67869|polyadenylate-binding protein-interacting protein 2	BC010190|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK150957|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK005462|Paip2|67869|polyadenylate-binding protein-interacting protein 2	AK009909|Paip2|67869|polyadenylate-binding protein-interacting protein 2	NM_026420|Paip2|67869|polyadenylate-binding protein-interacting protein 2
mm9_v1_chr6_+_83958578_83958628	0.150964	HNF4A_NR2F1,2.p2	NM_001077694|Dysf|26903|dysferlin	EF041824|Dysf|26903|dysferlin
mm9_v1_chr8_-_113551591_113551618	0.150793	HNF4A_NR2F1,2.p2	BC025594|Ddx19b|234733|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm9_v1_chr4_+_24825226_24825304	0.150671	HNF4A_NR2F1,2.p2	NM_026742|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK160341|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK034728|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK019042|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	BC028764|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK003553|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
mm9_v1_chr13_+_34967499_34967514	0.150283	HNF4A_NR2F1,2.p2	AB516304|Prpf4b|19134|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm9_v1_chr7_+_109044853_109044944	0.150208	HNF4A_NR2F1,2.p2	AK139635|3200002M19Rik|75430|RIKEN cDNA 3200002M19 gene	NM_027532|3200002M19Rik|75430|RIKEN cDNA 3200002M19 gene	AK135201|3200002M19Rik|75430|RIKEN cDNA 3200002M19 gene	AK014309|3200002M19Rik|75430|RIKEN cDNA 3200002M19 gene	BC080730|3200002M19Rik|75430|RIKEN cDNA 3200002M19 gene
mm9_v1_chr2_-_118375365_118375421	0.149033	HNF4A_NR2F1,2.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr19_-_54018725_54018744	0.149004	HNF4A_NR2F1,2.p2	AK016185|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr3_-_94276817_94276835	0.148853	HNF4A_NR2F1,2.p2	AK019569|Riiad1|66353|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
mm9_v1_chr15_-_36538514_36538548	0.148834	HNF4A_NR2F1,2.p2	X65553|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC003928|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr14_-_31439299_31439408	0.145834	HNF4A_NR2F1,2.p2	BC051416|Prkcd|18753|protein kinase C, delta	M69042|Prkcd|18753|protein kinase C, delta	AK168768|Prkcd|18753|protein kinase C, delta	AK171476|Prkcd|18753|protein kinase C, delta	AK144231|Prkcd|18753|protein kinase C, delta
mm9_v1_chr15_-_36538691_36538736	0.145312	HNF4A_NR2F1,2.p2	AK152064|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	BC046233|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159703|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK044829|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160883|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK160968|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161671|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK168466|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK089747|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK150839|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK159733|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK005009|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK133196|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	AK161123|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1	NM_008774|Pabpc1|18458|poly(A) binding protein, cytoplasmic 1
mm9_v1_chr18_-_35426106_35426253	0.144031	HNF4A_NR2F1,2.p2	
mm9_v1_chr15_-_98558560_98558628	0.143724	HNF4A_NR2F1,2.p2	BC021345|Fkbp11|66120|FK506 binding protein 11	BC037596|Fkbp11|66120|FK506 binding protein 11	AK019132|Fkbp11|66120|FK506 binding protein 11	BC002311|Fkbp11|66120|FK506 binding protein 11	BC022900|Fkbp11|66120|FK506 binding protein 11	AK007813|Fkbp11|66120|FK506 binding protein 11	AK003331|Fkbp11|66120|FK506 binding protein 11	NM_024169|Fkbp11|66120|FK506 binding protein 11
mm9_v1_chr16_+_33056538_33056630	0.142708	HNF4A_NR2F1,2.p2	NM_001130485|Rpl35a|57808|ribosomal protein L35A	AK046386|Rpl35a|57808|ribosomal protein L35A	AK160963|Rpl35a|57808|ribosomal protein L35A	NM_001130484|Rpl35a|57808|ribosomal protein L35A	AK028214|Rpl35a|57808|ribosomal protein L35A	AK003063|Rpl35a|57808|ribosomal protein L35A	BC100599|Rpl35a|57808|ribosomal protein L35A	AK010692|Rpl35a|57808|ribosomal protein L35A	BC086771|Rpl35a|57808|ribosomal protein L35A	BC090255|Rpl35a|57808|ribosomal protein L35A	NM_021338|Rpl35a|57808|ribosomal protein L35A	BC027223|Rpl35a|57808|ribosomal protein L35A
mm9_v1_chr7_-_112548498_112548560	0.142703	HNF4A_NR2F1,2.p2	BC018464|Fam160a2|74349|family with sequence similarity 160, member A2	AK154173|Fam160a2|74349|family with sequence similarity 160, member A2	AK155273|Fam160a2|74349|family with sequence similarity 160, member A2	AK085350|Fam160a2|74349|family with sequence similarity 160, member A2	AK159716|Fam160a2|74349|family with sequence similarity 160, member A2	BC063093|Fam160a2|74349|family with sequence similarity 160, member A2	NM_199009|Fam160a2|74349|family with sequence similarity 160, member A2	AK169996|Fam160a2|74349|family with sequence similarity 160, member A2
mm9_v1_chr19_+_41557168_41557205	0.142349	HNF4A_NR2F1,2.p2	AK077424|Lcor|212391|ligand dependent nuclear receptor corepressor	AB076079|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr5_+_43907004_43907024	0.142041	HNF4A_NR2F1,2.p2	AK078818|C1qtnf7|109323|C1q and tumor necrosis factor related protein 7
mm9_v1_chr6_-_124729735_124729744	0.140788	HNF4A_NR2F1,2.p2	NM_013588|Lrrc23|16977|leucine rich repeat containing 23	AK015011|Lrrc23|16977|leucine rich repeat containing 23	BC049601|Lrrc23|16977|leucine rich repeat containing 23
mm9_v1_chr16_+_45158943_45159161	0.140564	HNF4A_NR2F1,2.p2	AK078877|Atg3|67841|autophagy-related 3 (yeast)	BC010809|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr11_+_121563691_121563785	0.139891	HNF4A_NR2F1,2.p2	BC024445|Metrnl|210029|meteorin, glial cell differentiation regulator-like	AK034855|Metrnl|210029|meteorin, glial cell differentiation regulator-like	AK053718|Metrnl|210029|meteorin, glial cell differentiation regulator-like	AK085880|Metrnl|210029|meteorin, glial cell differentiation regulator-like	AK170549|Metrnl|210029|meteorin, glial cell differentiation regulator-like	AK170800|Metrnl|210029|meteorin, glial cell differentiation regulator-like	NM_144797|Metrnl|210029|meteorin, glial cell differentiation regulator-like	BC026646|Metrnl|210029|meteorin, glial cell differentiation regulator-like	BC019776|Metrnl|210029|meteorin, glial cell differentiation regulator-like
mm9_v1_chr14_-_21299119_21299187	0.139669	HNF4A_NR2F1,2.p2	AK032013|Anxa7|11750|annexin A7	AK169199|Anxa7|11750|annexin A7	AK167588|Anxa7|11750|annexin A7	BC008997|Anxa7|11750|annexin A7	AK149654|Anxa7|11750|annexin A7	AK077579|Anxa7|11750|annexin A7	AK041855|Anxa7|11750|annexin A7	AK151438|Anxa7|11750|annexin A7	AK161613|Anxa7|11750|annexin A7	AK134589|Anxa7|11750|annexin A7
mm9_v1_chr10_+_59465552_59465606	0.138852	HNF4A_NR2F1,2.p2	AK053811|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	BC030905|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	NM_026937|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	AK144614|Ascc1|69090|activating signal cointegrator 1 complex subunit 1	AK171958|Ascc1|69090|activating signal cointegrator 1 complex subunit 1
mm9_v1_chr2_-_75542552_75542719	0.137721	HNF4A_NR2F1,2.p2	BC003340|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	AK144247|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	AK029360|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	AK142347|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	BC026943|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	NM_010902|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2	U20532|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2
mm9_v1_chr7_-_149573693_149573841	0.137394	HNF4A_NR2F1,2.p2	X53337|Ctsd|13033|cathepsin D	AK167867|Ctsd|13033|cathepsin D	AK150622|Ctsd|13033|cathepsin D	AK089294|Ctsd|13033|cathepsin D	AK150364|Ctsd|13033|cathepsin D	AK150579|Ctsd|13033|cathepsin D	AK150636|Ctsd|13033|cathepsin D	AK150694|Ctsd|13033|cathepsin D	AK150768|Ctsd|13033|cathepsin D	AK151256|Ctsd|13033|cathepsin D	AK151275|Ctsd|13033|cathepsin D	AK151276|Ctsd|13033|cathepsin D	AK151374|Ctsd|13033|cathepsin D	AK151829|Ctsd|13033|cathepsin D	AK152168|Ctsd|13033|cathepsin D	AK152187|Ctsd|13033|cathepsin D	AK152188|Ctsd|13033|cathepsin D	AK152458|Ctsd|13033|cathepsin D	AK152567|Ctsd|13033|cathepsin D	AK152578|Ctsd|13033|cathepsin D	AK152680|Ctsd|13033|cathepsin D	AK152828|Ctsd|13033|cathepsin D	AK152881|Ctsd|13033|cathepsin D	AK152892|Ctsd|13033|cathepsin D	AK153191|Ctsd|13033|cathepsin D	AK153291|Ctsd|13033|cathepsin D	AK159097|Ctsd|13033|cathepsin D	AK159209|Ctsd|13033|cathepsin D	AK159490|Ctsd|13033|cathepsin D	AK159580|Ctsd|13033|cathepsin D	AK159896|Ctsd|13033|cathepsin D	AK167698|Ctsd|13033|cathepsin D	AK171195|Ctsd|13033|cathepsin D	AK172583|Ctsd|13033|cathepsin D	AK150363|Ctsd|13033|cathepsin D	AK151962|Ctsd|13033|cathepsin D	AK152406|Ctsd|13033|cathepsin D	AK159743|Ctsd|13033|cathepsin D	AK152036|Ctsd|13033|cathepsin D	AK166864|Ctsd|13033|cathepsin D	AK167750|Ctsd|13033|cathepsin D	AK152593|Ctsd|13033|cathepsin D	BC048900|Ctsd|13033|cathepsin D	BC053937|Ctsd|13033|cathepsin D	BC053940|Ctsd|13033|cathepsin D	AK152638|Ctsd|13033|cathepsin D	BC057931|Ctsd|13033|cathepsin D	AK167143|Ctsd|13033|cathepsin D	AK159512|Ctsd|13033|cathepsin D	NM_009983|Ctsd|13033|cathepsin D	X52886|Ctsd|13033|cathepsin D	AK166938|Ctsd|13033|cathepsin D	AK159440|Ctsd|13033|cathepsin D	AK159970|Ctsd|13033|cathepsin D	AK150946|Ctsd|13033|cathepsin D	AK152045|Ctsd|13033|cathepsin D	AK169139|Ctsd|13033|cathepsin D	AK165227|Ctsd|13033|cathepsin D	AK167366|Ctsd|13033|cathepsin D	AK093885|Ctsd|13033|cathepsin D	BC054758|Ctsd|13033|cathepsin D
mm9_v1_chr17_-_25152682_25152728	0.137026	HNF4A_NR2F1,2.p2	AK089393|Cramp1l|57354|Crm, cramped-like (Drosophila)
mm9_v1_chr2_+_174586283_174586336	0.1366	HNF4A_NR2F1,2.p2	BC137727|Edn3|13616|endothelin 3	BC137730|Edn3|13616|endothelin 3	AK048006|Edn3|13616|endothelin 3
mm9_v1_chr16_-_94591826_94592078	0.136533	HNF4A_NR2F1,2.p2	AF216308|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC061117|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159619|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159620|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216307|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr5_-_143579060_143579087	0.136053	HNF4A_NR2F1,2.p2	BC049818|Tnrc18|231861|trinucleotide repeat containing 18	NM_001122730|Tnrc18|231861|trinucleotide repeat containing 18	NM_178242|Tnrc18|231861|trinucleotide repeat containing 18
mm9_v1_chrX_+_132781054_132781063	0.135689	HNF4A_NR2F1,2.p2	AK213578|Wbp5|22381|WW domain binding protein 5
mm9_v1_chr4_+_138748812_138748922	0.13492	HNF4A_NR2F1,2.p2	AK159390|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK160082|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK156778|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	NM_009798|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	BC002053|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK153367|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK153394|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	AK168738|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	NM_001037761|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	U10406|Capzb|12345|capping protein (actin filament) muscle Z-line, beta	U10407|Capzb|12345|capping protein (actin filament) muscle Z-line, beta
mm9_v1_chr5_+_104475948_104476060	0.134752	HNF4A_NR2F1,2.p2	AK158058|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK004444|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK076500|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_028794|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC033921|Nudt9|74167|nudix (nucleoside diphosphate linked moiety X)-type motif 9
mm9_v1_chr19_+_41557475_41557518	0.134199	HNF4A_NR2F1,2.p2	AK041621|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr7_+_134388553_134388625	0.132963	HNF4A_NR2F1,2.p2	BC052091|Zfp771|244216|zinc finger protein 771	BC062882|Zfp771|244216|zinc finger protein 771
mm9_v1_chr5_-_108561512_108561635	0.13283	HNF4A_NR2F1,2.p2	AK033463|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK014065|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK140979|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK159813|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK170036|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	BC020076|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	BC132023|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	BC138226|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK151650|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK078317|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK042931|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	AK014490|Tmed5|73130|transmembrane emp24 protein transport domain containing 5	NM_028876|Tmed5|73130|transmembrane emp24 protein transport domain containing 5
mm9_v1_chr1_-_167564449_167564681	0.131048	HNF4A_NR2F1,2.p2	AK192253|Mpzl1|68481|myelin protein zero-like 1	AK192408|Mpzl1|68481|myelin protein zero-like 1	AK193736|Mpzl1|68481|myelin protein zero-like 1	AK197743|Mpzl1|68481|myelin protein zero-like 1	AY764248|Mpzl1|68481|myelin protein zero-like 1	BC072563|Mpzl1|68481|myelin protein zero-like 1	AK090278|Mpzl1|68481|myelin protein zero-like 1	AK169385|Mpzl1|68481|myelin protein zero-like 1	AY764247|Mpzl1|68481|myelin protein zero-like 1	NM_001001880|Mpzl1|68481|myelin protein zero-like 1	NM_001083897|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr18_-_12394830_12394911	0.130827	HNF4A_NR2F1,2.p2	AK044878|Npc1|18145|Niemann Pick type C1	AK170880|Npc1|18145|Niemann Pick type C1	AK171371|Npc1|18145|Niemann Pick type C1	AK087174|Npc1|18145|Niemann Pick type C1	AF003348|Npc1|18145|Niemann Pick type C1	AK040367|Npc1|18145|Niemann Pick type C1	BC052437|Npc1|18145|Niemann Pick type C1	BC054539|Npc1|18145|Niemann Pick type C1	NM_008720|Npc1|18145|Niemann Pick type C1
mm9_v1_chr16_-_90934985_90935126	0.128849	HNF4A_NR2F1,2.p2	AK003413|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	BC019533|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	AK018510|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	AK045905|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene	NM_026502|1110004E09Rik|68001|RIKEN cDNA 1110004E09 gene
mm9_v1_chr10_-_13272820_13272870	0.12879	HNF4A_NR2F1,2.p2	BC033415|Pex3|56535|peroxisomal biogenesis factor 3	AK075820|Pex3|56535|peroxisomal biogenesis factor 3	AF152996|Pex3|56535|peroxisomal biogenesis factor 3
mm9_v1_chr9_+_44307218_44307218	0.128325	HNF4A_NR2F1,2.p2	AY296058|Bcl9l|80288|B-cell CLL/lymphoma 9-like	NM_030256|Bcl9l|80288|B-cell CLL/lymphoma 9-like
mm9_v1_chr2_-_132403964_132404008	0.127292	HNF4A_NR2F1,2.p2	AK031658|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042671|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042672|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_028802|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm9_v1_chr13_+_63402580_63402599	0.126609	HNF4A_NR2F1,2.p2	AK081363|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	AK082032|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene	BC027288|2010111I01Rik|72061|RIKEN cDNA 2010111I01 gene
mm9_v1_chr19_+_4756524_4756619	0.126509	HNF4A_NR2F1,2.p2	NM_025717|Rbm4b|66704|RNA binding motif protein 4B	AK006447|Rbm4b|66704|RNA binding motif protein 4B	AK032852|Rbm4b|66704|RNA binding motif protein 4B	AK019871|Rbm4b|66704|RNA binding motif protein 4B	AK142116|Rbm4b|66704|RNA binding motif protein 4B	AK160796|Rbm4b|66704|RNA binding motif protein 4B	AK014823|Rbm4b|66704|RNA binding motif protein 4B	AK028347|Rbm4b|66704|RNA binding motif protein 4B	BC019488|Rbm4b|66704|RNA binding motif protein 4B
mm9_v1_chr13_+_94077988_94077988	0.124637	HNF4A_NR2F1,2.p2	AY137385|Homer1|26556|homer homolog 1 (Drosophila)	NM_152134|Homer1|26556|homer homolog 1 (Drosophila)
mm9_v1_chr7_+_53289065_53289193	0.123278	HNF4A_NR2F1,2.p2	NM_153057|Nomo1|211548|nodal modulator 1	AK035957|Nomo1|211548|nodal modulator 1	AK142338|Nomo1|211548|nodal modulator 1	AK030584|Nomo1|211548|nodal modulator 1	AK150107|Nomo1|211548|nodal modulator 1	BC072630|Nomo1|211548|nodal modulator 1	AK082495|Nomo1|211548|nodal modulator 1
mm9_v1_chr18_+_24812191_24812191	0.122836	HNF4A_NR2F1,2.p2	BC113180|Mocos|68591|molybdenum cofactor sulfurase	BC113786|Mocos|68591|molybdenum cofactor sulfurase	NM_026779|Mocos|68591|molybdenum cofactor sulfurase
mm9_v1_chr7_-_88837850_88837850	0.122436	HNF4A_NR2F1,2.p2	NM_001164087|Homer2|26557|homer homolog 2 (Drosophila)
mm9_v1_chr8_-_75094915_75095130	0.122208	HNF4A_NR2F1,2.p2	BC037511|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK152451|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK152748|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK035786|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK151539|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	NM_172396|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AF140607|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	BC055692|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK009731|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK148562|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK149156|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK169625|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK018610|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	BC060963|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK206814|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene
mm9_v1_chr2_-_77654669_77654872	0.121222	HNF4A_NR2F1,2.p2	AK079322|Zfp385b|241494|zinc finger protein 385B	AK149352|Zfp385b|241494|zinc finger protein 385B	AK046798|Zfp385b|241494|zinc finger protein 385B	NM_178723|Zfp385b|241494|zinc finger protein 385B
mm9_v1_chr14_+_52473672_52473672	0.120367	HNF4A_NR2F1,2.p2	NM_017385|Ear7|53873|eosinophil-associated, ribonuclease A family, member 7
mm9_v1_chr11_+_68933954_68933975	0.118179	HNF4A_NR2F1,2.p2	AK050791|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	BC134378|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	NM_033041|Hes7|84653|hairy and enhancer of split 7 (Drosophila)	AB049065|Hes7|84653|hairy and enhancer of split 7 (Drosophila)
mm9_v1_chr10_+_82323085_82323203	0.117706	HNF4A_NR2F1,2.p2	NM_001042514|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr2_+_3035629_3035684	0.115949	HNF4A_NR2F1,2.p2	NM_001081161|Fam171a1|269233|family with sequence similarity 171, member A1	AK032237|Fam171a1|269233|family with sequence similarity 171, member A1
mm9_v1_chr7_+_25862223_25862340	0.115637	HNF4A_NR2F1,2.p2	AK143997|Zfp574|232976|zinc finger protein 574	NM_001168506|Zfp574|232976|zinc finger protein 574	NM_175477|Zfp574|232976|zinc finger protein 574	AK053744|Zfp574|232976|zinc finger protein 574	BC059044|Zfp574|232976|zinc finger protein 574	AK042074|Zfp574|232976|zinc finger protein 574	AK170243|Zfp574|232976|zinc finger protein 574	BC021833|Zfp574|232976|zinc finger protein 574	BC094354|Zfp574|232976|zinc finger protein 574
mm9_v1_chr7_-_27981077_27981289	0.115572	HNF4A_NR2F1,2.p2	L15447|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A	BC096648|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A	AK088550|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A	BC094006|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A	AK049541|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A	BC003229|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A	AK013886|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A	NM_015782|Snrpa|53607|small nuclear ribonucleoprotein polypeptide A
mm9_v1_chr14_+_29318658_29318741	0.115557	HNF4A_NR2F1,2.p2	NM_009524|Wnt5a|22418|wingless-related MMTV integration site 5A	AK031597|Wnt5a|22418|wingless-related MMTV integration site 5A	M89798|Wnt5a|22418|wingless-related MMTV integration site 5A
mm9_v1_chr10_+_80640253_80640449	0.115273	HNF4A_NR2F1,2.p2	AK178103|Eef2|13629|eukaryotic translation elongation factor 2	AK188800|Eef2|13629|eukaryotic translation elongation factor 2	AK193129|Eef2|13629|eukaryotic translation elongation factor 2	AK202382|Eef2|13629|eukaryotic translation elongation factor 2	AK214266|Eef2|13629|eukaryotic translation elongation factor 2	U89415|Eef2|13629|eukaryotic translation elongation factor 2	BC060707|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr11_-_31270060_31270077	0.114849	HNF4A_NR2F1,2.p2	AF031035|Stc2|20856|stanniocalcin 2	NM_011491|Stc2|20856|stanniocalcin 2
mm9_v1_chr16_+_4937622_4937664	0.112429	HNF4A_NR2F1,2.p2	AK189949|Mgrn1|17237|mahogunin, ring finger 1	AK194956|Mgrn1|17237|mahogunin, ring finger 1	AK218167|Mgrn1|17237|mahogunin, ring finger 1
mm9_v1_chr11_+_78002309_78002354	0.111699	HNF4A_NR2F1,2.p2	AB082927|Rab34|19376|RAB34, member of RAS oncogene family
mm9_v1_chr3_-_30868320_30868353	0.111263	HNF4A_NR2F1,2.p2	BC132533|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145123|Phc3|241915|polyhomeotic-like 3 (Drosophila)	BC145124|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AJ414610|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK037348|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK087339|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166208|Phc3|241915|polyhomeotic-like 3 (Drosophila)	AK166296|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165954|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165955|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_001165956|Phc3|241915|polyhomeotic-like 3 (Drosophila)	NM_153421|Phc3|241915|polyhomeotic-like 3 (Drosophila)
mm9_v1_chr9_-_106378494_106378548	0.111141	HNF4A_NR2F1,2.p2	AK165070|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	BC014870|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	AK170541|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	AY046317|Parp3|235587|poly (ADP-ribose) polymerase family, member 3
mm9_v1_chr8_+_87213179_87213195	0.110464	HNF4A_NR2F1,2.p2	AK040715|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK078395|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK084775|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK159467|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK170412|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK155251|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK171002|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	AK139463|Trmt1|212528|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
mm9_v1_chr13_-_76236058_76236125	0.109876	HNF4A_NR2F1,2.p2	AK013194|Arsk|77041|arylsulfatase K	AK083188|Arsk|77041|arylsulfatase K	AK086667|Arsk|77041|arylsulfatase K	AK019515|Arsk|77041|arylsulfatase K	AK032812|Arsk|77041|arylsulfatase K	AK144817|Arsk|77041|arylsulfatase K	AK165970|Arsk|77041|arylsulfatase K	BC046790|Arsk|77041|arylsulfatase K	BC058351|Arsk|77041|arylsulfatase K	AK084090|Arsk|77041|arylsulfatase K	AK031147|Arsk|77041|arylsulfatase K	AK039765|Arsk|77041|arylsulfatase K	AK033968|Arsk|77041|arylsulfatase K	AK046378|Arsk|77041|arylsulfatase K	NM_029847|Arsk|77041|arylsulfatase K
mm9_v1_chr2_+_130953108_130953187	0.108794	HNF4A_NR2F1,2.p2	BC011103|Hspa12b|72630|heat shock protein 12B	NM_028306|Hspa12b|72630|heat shock protein 12B	AK012548|Hspa12b|72630|heat shock protein 12B
mm9_v1_chr4_+_130219299_130219334	0.108622	HNF4A_NR2F1,2.p2	BC050747|Pum1|80912|pumilio 1 (Drosophila)	AK147185|Pum1|80912|pumilio 1 (Drosophila)	AF321909|Pum1|80912|pumilio 1 (Drosophila)	BC048174|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr5_-_92471976_92472071	0.106877	HNF4A_NR2F1,2.p2	BC117894|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	BC117895|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029066|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_177270|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029065|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_016912|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK144574|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm9_v1_chr2_-_180773777_180773949	0.106423	HNF4A_NR2F1,2.p2	AY574263|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4	AF225912|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4	AK083157|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4	AK136886|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4	BC053013|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4	NM_015730|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4	AK143938|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4	AK034228|Chrna4|11438|cholinergic receptor, nicotinic, alpha polypeptide 4
mm9_v1_chr5_+_8056508_8056593	0.105468	HNF4A_NR2F1,2.p2	AK134747|Sri|109552|sorcin	NM_001080974|Sri|109552|sorcin	AK146071|Sri|109552|sorcin	AK146911|Sri|109552|sorcin	AK168572|Sri|109552|sorcin	AK168792|Sri|109552|sorcin	AK168900|Sri|109552|sorcin	BC065790|Sri|109552|sorcin
mm9_v1_chr1_+_122499031_122499257	0.105155	HNF4A_NR2F1,2.p2	NM_010133|En1|13798|engrailed 1	AK140408|En1|13798|engrailed 1	L12703|En1|13798|engrailed 1
mm9_v1_chr11_-_75268137_75268225	0.104676	HNF4A_NR2F1,2.p2	NM_138950|Wdr81|192652|WD repeat domain 81
mm9_v1_chr15_-_79158526_79158679	0.104666	HNF4A_NR2F1,2.p2	BC049778|Pla2g6|53357|phospholipase A2, group VI	BC003487|Pla2g6|53357|phospholipase A2, group VI	AK153333|Pla2g6|53357|phospholipase A2, group VI	BC052845|Pla2g6|53357|phospholipase A2, group VI	AK144495|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr3_+_88383528_88383608	0.104439	HNF4A_NR2F1,2.p2	AK005340|Ssr2|66256|signal sequence receptor, beta	AK010565|Ssr2|66256|signal sequence receptor, beta	AK084530|Ssr2|66256|signal sequence receptor, beta	AK020145|Ssr2|66256|signal sequence receptor, beta	AK012281|Ssr2|66256|signal sequence receptor, beta	AK050505|Ssr2|66256|signal sequence receptor, beta	NM_025448|Ssr2|66256|signal sequence receptor, beta	BC010214|Ssr2|66256|signal sequence receptor, beta
mm9_v1_chr16_+_90738780_90738808	0.104058	HNF4A_NR2F1,2.p2	AY079153|Mrap|77037|melanocortin 2 receptor accessory protein	AY079154|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chr8_-_3926756_3926840	0.10263	HNF4A_NR2F1,2.p2	AK007656|Cd209b|69165|CD209b antigen	AF374471|Cd209b|69165|CD209b antigen	NM_001037800|Cd209b|69165|CD209b antigen	AF424796|Cd209b|69165|CD209b antigen	AF424790|Cd209b|69165|CD209b antigen	AF424791|Cd209b|69165|CD209b antigen	AF424792|Cd209b|69165|CD209b antigen	AF424793|Cd209b|69165|CD209b antigen	AF424797|Cd209b|69165|CD209b antigen	AF424799|Cd209b|69165|CD209b antigen	AF422108|Cd209b|69165|CD209b antigen	AK138999|Cd209b|69165|CD209b antigen	NM_026972|Cd209b|69165|CD209b antigen	AF373409|Cd209b|69165|CD209b antigen	AF424795|Cd209b|69165|CD209b antigen	AF424794|Cd209b|69165|CD209b antigen	AF424798|Cd209b|69165|CD209b antigen	AF424803|Cd209b|69165|CD209b antigen
mm9_v1_chr16_+_45158927_45158941	0.102211	HNF4A_NR2F1,2.p2	AK005266|Atg3|67841|autophagy-related 3 (yeast)	AK011409|Atg3|67841|autophagy-related 3 (yeast)	AK150914|Atg3|67841|autophagy-related 3 (yeast)	AK159231|Atg3|67841|autophagy-related 3 (yeast)	NM_026402|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr11_-_96902657_96902728	0.101247	HNF4A_NR2F1,2.p2	AK005668|Lrrc46|69297|leucine rich repeat containing 46	BC022723|Lrrc46|69297|leucine rich repeat containing 46	NM_027026|Lrrc46|69297|leucine rich repeat containing 46	AK158517|Lrrc46|69297|leucine rich repeat containing 46
mm9_v1_chr2_+_162843166_162843193	0.0990357	HNF4A_NR2F1,2.p2	AK167194|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)
mm9_v1_chr4_+_118634571_118634601	0.0989708	HNF4A_NR2F1,2.p2	AB034801|Lao1|100470|L-amino acid oxidase 1	NM_133892|Lao1|100470|L-amino acid oxidase 1	AK052781|Lao1|100470|L-amino acid oxidase 1
mm9_v1_chr17_-_23814415_23814446	0.0986967	HNF4A_NR2F1,2.p2	AK160136|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_001161746|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_013749|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr2_+_156138184_156138368	0.0978357	HNF4A_NR2F1,2.p2	AK014912|4921517L17Rik|70873|RIKEN cDNA 4921517L17 gene	NM_027585|4921517L17Rik|70873|RIKEN cDNA 4921517L17 gene	BC140978|4921517L17Rik|70873|RIKEN cDNA 4921517L17 gene	AK162372|4921517L17Rik|70873|RIKEN cDNA 4921517L17 gene	AK017330|4921517L17Rik|70873|RIKEN cDNA 4921517L17 gene	AK158271|4921517L17Rik|70873|RIKEN cDNA 4921517L17 gene	BC027204|4921517L17Rik|70873|RIKEN cDNA 4921517L17 gene
mm9_v1_chr4_-_57156022_57156027	0.0965813	HNF4A_NR2F1,2.p2	AK144315|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b	NM_019427|Epb4.1l4b|54357|erythrocyte protein band 4.1-like 4b
mm9_v1_chr2_-_160698705_160698728	0.0964022	HNF4A_NR2F1,2.p2	AK143296|Zhx3|320799|zinc fingers and homeoboxes 3	BC058111|Zhx3|320799|zinc fingers and homeoboxes 3	NM_177263|Zhx3|320799|zinc fingers and homeoboxes 3
mm9_v1_chr1_+_184695026_184695133	0.0961377	HNF4A_NR2F1,2.p2	BC021842|Susd4|96935|sushi domain containing 4	NM_144796|Susd4|96935|sushi domain containing 4	AK035779|Susd4|96935|sushi domain containing 4	AK088629|Susd4|96935|sushi domain containing 4
mm9_v1_chr2_-_92210955_92211192	0.095783	HNF4A_NR2F1,2.p2	HM141800|Gyltl1b|228366|glycosyltransferase-like 1B	AK220181|Gyltl1b|228366|glycosyltransferase-like 1B	BC096655|Gyltl1b|228366|glycosyltransferase-like 1B	BC116715|Gyltl1b|228366|glycosyltransferase-like 1B	AK077630|Gyltl1b|228366|glycosyltransferase-like 1B	BC058199|Gyltl1b|228366|glycosyltransferase-like 1B	AK081797|Gyltl1b|228366|glycosyltransferase-like 1B	AY742914|Gyltl1b|228366|glycosyltransferase-like 1B	AY742915|Gyltl1b|228366|glycosyltransferase-like 1B	NM_001166633|Gyltl1b|228366|glycosyltransferase-like 1B	NM_172670|Gyltl1b|228366|glycosyltransferase-like 1B
mm9_v1_chr9_+_44215727_44215760	0.0953077	HNF4A_NR2F1,2.p2	
mm9_v1_chr7_-_4947629_4947709	0.0941189	HNF4A_NR2F1,2.p2	AK003337|Zfp579|68490|zinc finger protein 579	AK082494|Zfp579|68490|zinc finger protein 579	AK143550|Zfp579|68490|zinc finger protein 579	NM_026741|Zfp579|68490|zinc finger protein 579	AK148159|Zfp579|68490|zinc finger protein 579
mm9_v1_chrX_+_10294490_10294637	0.0925665	HNF4A_NR2F1,2.p2	NM_001166635|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	NM_026524|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK160062|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK090003|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK159166|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK172143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC004014|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	BC052899|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK151153|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr17_-_34168488_34168647	0.0922371	HNF4A_NR2F1,2.p2	BC115426|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	BC115427|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	M32010|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK159968|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK145956|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK087839|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	AK167344|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	NM_001077709|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7	NM_008202|Slc39a7|14977|solute carrier family 39 (zinc transporter), member 7
mm9_v1_chr7_+_135390456_135390509	0.0920578	HNF4A_NR2F1,2.p2	AK158409|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK085042|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK003170|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK087114|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK156423|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC002049|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	AK041233|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143892|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143893|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	DQ143894|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr2_+_32218707_32218872	0.0916703	HNF4A_NR2F1,2.p2	AK089986|Ciz1|68379|CDKN1A interacting zinc finger protein 1	AK159103|Ciz1|68379|CDKN1A interacting zinc finger protein 1	BC018483|Ciz1|68379|CDKN1A interacting zinc finger protein 1	NM_028412|Ciz1|68379|CDKN1A interacting zinc finger protein 1	BC072624|Ciz1|68379|CDKN1A interacting zinc finger protein 1
mm9_v1_chr2_+_140221165_140221195	0.0916092	HNF4A_NR2F1,2.p2	AK134694|Macrod2|72899|MACRO domain containing 2	NM_001013802|Macrod2|72899|MACRO domain containing 2	AK013491|Macrod2|72899|MACRO domain containing 2	NM_028387|Macrod2|72899|MACRO domain containing 2	AK011824|Macrod2|72899|MACRO domain containing 2	AK165589|Macrod2|72899|MACRO domain containing 2	AK029184|Macrod2|72899|MACRO domain containing 2	AK160433|Macrod2|72899|MACRO domain containing 2	AK004072|Macrod2|72899|MACRO domain containing 2
mm9_v1_chr8_-_113426341_113426387	0.091423	HNF4A_NR2F1,2.p2	AK140503|Fuk|234730|fucokinase	AK164340|Fuk|234730|fucokinase	AJ297482|Fuk|234730|fucokinase	AJ534942|Fuk|234730|fucokinase	AY223865|Fuk|234730|fucokinase	NM_172283|Fuk|234730|fucokinase	NM_181666|Fuk|234730|fucokinase	AK161763|Fuk|234730|fucokinase
mm9_v1_chr16_+_13265171_13265171	0.0890749	HNF4A_NR2F1,2.p2	BC028459|Mkl2|239719|MKL/myocardin-like 2	NM_181860|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr7_-_148399978_148399978	0.0883327	HNF4A_NR2F1,2.p2	BC119093|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene	BC119119|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene	BC144834|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene	NM_028050|1600016N20Rik|72000|RIKEN cDNA 1600016N20 gene
mm9_v1_chr13_+_120251647_120251660	0.0882305	HNF4A_NR2F1,2.p2	BC030738|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene
mm9_v1_chr2_-_164737043_164737249	0.0879912	HNF4A_NR2F1,2.p2	AK157577|Zfp335|329559|zinc finger protein 335	BC062921|Zfp335|329559|zinc finger protein 335	NM_199027|Zfp335|329559|zinc finger protein 335
mm9_v1_chr3_-_82707816_82707849	0.0879602	HNF4A_NR2F1,2.p2	BC141375|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)	BC141378|Lrat|79235|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
mm9_v1_chr14_+_13116767_13116814	0.0877972	HNF4A_NR2F1,2.p2	BC057656|3830406C13Rik|218734|RIKEN cDNA 3830406C13 gene
mm9_v1_chr10_-_24431855_24431964	0.0877331	HNF4A_NR2F1,2.p2	J02700|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	NM_008813|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1	BC050011|Enpp1|18605|ectonucleotide pyrophosphatase/phosphodiesterase 1
mm9_v1_chr15_+_75771381_75771478	0.0873625	HNF4A_NR2F1,2.p2	AK046806|Zfp623|78834|zinc finger protein 623	AY610936|Zfp623|78834|zinc finger protein 623	NM_030199|Zfp623|78834|zinc finger protein 623	AK169386|Zfp623|78834|zinc finger protein 623	AK172985|Zfp623|78834|zinc finger protein 623	AK030476|Zfp623|78834|zinc finger protein 623	BC021834|Zfp623|78834|zinc finger protein 623
mm9_v1_chr7_-_135605026_135605189	0.0872982	HNF4A_NR2F1,2.p2	NM_009383|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1	AK132677|Tial1|21843|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm9_v1_chr13_+_105607262_105607338	0.0868887	HNF4A_NR2F1,2.p2	BC038302|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK018357|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK020113|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK013737|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK014102|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	AK013429|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC096661|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	NM_026075|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC027133|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC116993|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	BC116999|Srek1ip1|67288|splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
mm9_v1_chr8_-_93659394_93659394	0.0868065	HNF4A_NR2F1,2.p2	NM_010241|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein
mm9_v1_chr11_+_119352933_119353046	0.0848983	HNF4A_NR2F1,2.p2	NM_177394|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK170595|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK172181|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	BC056486|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene	AK042626|A730011L01Rik|338371|RIKEN cDNA A730011L01 gene
mm9_v1_chr3_-_90193813_90193859	0.0844848	HNF4A_NR2F1,2.p2	BC141134|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AK135190|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	AJ577573|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	NM_011988|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3	BC060052|Slc27a3|26568|solute carrier family 27 (fatty acid transporter), member 3
mm9_v1_chr2_+_167328944_167328984	0.0827083	HNF4A_NR2F1,2.p2	AK163062|Rnf114|81018|ring finger protein 114	BC054416|Rnf114|81018|ring finger protein 114	BC023125|Rnf114|81018|ring finger protein 114	AK139030|Rnf114|81018|ring finger protein 114	AK153452|Rnf114|81018|ring finger protein 114	AK159818|Rnf114|81018|ring finger protein 114	BC043446|Rnf114|81018|ring finger protein 114
mm9_v1_chr11_+_61497911_61497965	0.082039	HNF4A_NR2F1,2.p2	NM_178618|Fam83g|69640|family with sequence similarity 83, member G	BC085279|Fam83g|69640|family with sequence similarity 83, member G	AK028566|Fam83g|69640|family with sequence similarity 83, member G
mm9_v1_chr10_+_80102813_80103107	0.0815416	HNF4A_NR2F1,2.p2	AK180542|Csnk1g2|103236|casein kinase 1, gamma 2	AK182278|Csnk1g2|103236|casein kinase 1, gamma 2	AK184141|Csnk1g2|103236|casein kinase 1, gamma 2	AK184876|Csnk1g2|103236|casein kinase 1, gamma 2	AK013192|Csnk1g2|103236|casein kinase 1, gamma 2
mm9_v1_chr3_-_108365251_108365316	0.081427	HNF4A_NR2F1,2.p2	AK046697|Tmem167b|67495|transmembrane protein 167B	BC050932|Tmem167b|67495|transmembrane protein 167B	AK008415|Tmem167b|67495|transmembrane protein 167B	BC055449|Tmem167b|67495|transmembrane protein 167B
mm9_v1_chr13_+_14705508_14705551	0.0814032	HNF4A_NR2F1,2.p2	AK136115|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	NM_008944|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK151883|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK152862|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK167752|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012990|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK035578|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK154011|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012119|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	BC026768|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AF099733|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2
mm9_v1_chr11_-_5661971_5662117	0.080674	HNF4A_NR2F1,2.p2	AK191392|Urgcp|72046|upregulator of cell proliferation	AK129378|Urgcp|72046|upregulator of cell proliferation
mm9_v1_chr7_-_31373735_31373744	0.0803178	HNF4A_NR2F1,2.p2	AB182318|Wbp7|75410|WW domain binding protein 7	NM_029274|Wbp7|75410|WW domain binding protein 7
mm9_v1_chr5_-_117565868_117565988	0.0793523	HNF4A_NR2F1,2.p2	BC062176|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK010274|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK150633|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AF469109|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK043652|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK138947|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	BC055764|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)	AK045475|Suds3|71954|suppressor of defective silencing 3 homolog (S. cerevisiae)
mm9_v1_chrX_-_65174607_65174624	0.079041	HNF4A_NR2F1,2.p2	AK016292|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	BC125317|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	BC138016|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	AK017084|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene	NM_025763|4933436I01Rik|66780|RIKEN cDNA 4933436I01 gene
mm9_v1_chr11_-_78959855_78959908	0.0783953	HNF4A_NR2F1,2.p2	NM_013571|Ksr1|16706|kinase suppressor of ras 1	U43585|Ksr1|16706|kinase suppressor of ras 1	AK036566|Ksr1|16706|kinase suppressor of ras 1
mm9_v1_chrX_+_109714134_109714134	0.0778275	HNF4A_NR2F1,2.p2	AK038956|Zfp711|245595|zinc finger protein 711	NM_177747|Zfp711|245595|zinc finger protein 711
mm9_v1_chr11_-_50024275_50024312	0.076972	HNF4A_NR2F1,2.p2	U57413|Sqstm1|18412|sequestosome 1	NM_011018|Sqstm1|18412|sequestosome 1	U40930|Sqstm1|18412|sequestosome 1
mm9_v1_chr11_+_57917469_57917691	0.0752867	HNF4A_NR2F1,2.p2	AK150757|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AK153907|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	BC004040|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	NM_026949|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AK075727|Cnot8|69125|CCR4-NOT transcription complex, subunit 8	AY515608|Cnot8|69125|CCR4-NOT transcription complex, subunit 8
mm9_v1_chr19_+_6276685_6276733	0.0749925	HNF4A_NR2F1,2.p2	AK088980|Ehd1|13660|EH-domain containing 1	AK172669|Ehd1|13660|EH-domain containing 1
mm9_v1_chr4_-_148681792_148681843	0.0738391	HNF4A_NR2F1,2.p2	AK036129|Kif1b|16561|kinesin family member 1B	NM_008441|Kif1b|16561|kinesin family member 1B	NM_207682|Kif1b|16561|kinesin family member 1B	AK134946|Kif1b|16561|kinesin family member 1B
mm9_v1_chr5_+_145875080_145875194	0.0735482	HNF4A_NR2F1,2.p2	AK002274|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK005378|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK151911|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK153510|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	NM_023142|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK159371|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK159477|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK168774|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK148145|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK157098|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK170759|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK172124|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK147731|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK171364|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC092051|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK180107|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK197333|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC003441|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	AK167978|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B	BC010275|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr2_-_34658320_34658334	0.0731897	HNF4A_NR2F1,2.p2	
mm9_v1_chr1_-_39708086_39708119	0.0731426	HNF4A_NR2F1,2.p2	AK134861|Creg2|263764|cellular repressor of E1A-stimulated genes 2
mm9_v1_chr7_-_140315100_140315165	0.072062	HNF4A_NR2F1,2.p2	NM_009980|Ctbp2|13017|C-terminal binding protein 2
mm9_v1_chr17_+_75404893_75404907	0.0718427	HNF4A_NR2F1,2.p2	AF022889|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr19_+_41557126_41557136	0.07175	HNF4A_NR2F1,2.p2	AK155007|Lcor|212391|ligand dependent nuclear receptor corepressor	BC099938|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr11_+_100740999_100741022	0.0711173	HNF4A_NR2F1,2.p2	AK134012|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr1_-_171899278_171899299	0.0704449	HNF4A_NR2F1,2.p2	AK028380|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	AK050211|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	BC011464|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7
mm9_v1_chr15_-_101363197_101363254	0.0702475	HNF4A_NR2F1,2.p2	AY028607|Krt84|16680|keratin 84	BC114971|Krt84|16680|keratin 84	NM_008474|Krt84|16680|keratin 84
mm9_v1_chr2_+_72123787_72123852	0.0690703	HNF4A_NR2F1,2.p2	AK087363|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene	BC023718|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene	AK045444|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene
mm9_v1_chr7_-_26022753_26022882	0.0690228	HNF4A_NR2F1,2.p2	NM_001031667|Gsk3a|606496|glycogen synthase kinase 3 alpha
mm9_v1_chr19_+_9063730_9063822	0.0690166	HNF4A_NR2F1,2.p2	AK009866|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)	AK045184|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)	NM_001039959|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)	NM_009643|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)	AK021404|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)	AK021407|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr15_+_101004502_101004580	0.0681509	HNF4A_NR2F1,2.p2	BC145775|Acvr1b|11479|activin A receptor, type 1B	BC145777|Acvr1b|11479|activin A receptor, type 1B	AK154578|Acvr1b|11479|activin A receptor, type 1B	AK157910|Acvr1b|11479|activin A receptor, type 1B	NM_007395|Acvr1b|11479|activin A receptor, type 1B	BC059832|Acvr1b|11479|activin A receptor, type 1B	Z31663|Acvr1b|11479|activin A receptor, type 1B
mm9_v1_chr8_-_110112368_110112383	0.0680335	HNF4A_NR2F1,2.p2	NM_010817|Psmd7|17463|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
mm9_v1_chr2_-_122011924_122011924	0.067544	HNF4A_NR2F1,2.p2	AK015195|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)	NM_026251|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)
mm9_v1_chr2_+_130389461_130389507	0.067376	HNF4A_NR2F1,2.p2	AK169837|Mrps26|99045|mitochondrial ribosomal protein S26	AK131626|Mrps26|99045|mitochondrial ribosomal protein S26	BC048517|Mrps26|99045|mitochondrial ribosomal protein S26	NM_207207|Mrps26|99045|mitochondrial ribosomal protein S26
mm9_v1_chr3_-_100489321_100489392	0.0666644	HNF4A_NR2F1,2.p2	AK013515|Man1a2|17156|mannosidase, alpha, class 1A, member 2	U03457|Man1a2|17156|mannosidase, alpha, class 1A, member 2	U03458|Man1a2|17156|mannosidase, alpha, class 1A, member 2
mm9_v1_chr7_+_147323460_147323573	0.0635506	HNF4A_NR2F1,2.p2	NM_199301|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	AK144625|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	AK144453|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	AK140018|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)	BC027306|Mtg1|212508|mitochondrial GTPase 1 homolog (S. cerevisiae)
mm9_v1_chr6_+_86799460_86799754	0.0630981	HNF4A_NR2F1,2.p2	AK147363|Aak1|269774|AP2 associated kinase 1	NM_001040106|Aak1|269774|AP2 associated kinase 1	NM_177762|Aak1|269774|AP2 associated kinase 1	AK158879|Aak1|269774|AP2 associated kinase 1	BC141176|Aak1|269774|AP2 associated kinase 1
mm9_v1_chr9_-_75257067_75257210	0.0604877	HNF4A_NR2F1,2.p2	NM_027418|Mapk6|50772|mitogen-activated protein kinase 6
mm9_v1_chr7_-_97624504_97624555	0.0600865	HNF4A_NR2F1,2.p2	AK003201|Tmem126b|68472|transmembrane protein 126B	BC049680|Tmem126b|68472|transmembrane protein 126B	NM_026734|Tmem126b|68472|transmembrane protein 126B
mm9_v1_chr2_-_34681496_34681692	0.0582	HNF4A_NR2F1,2.p2	X54352|Fbxw2|30050|F-box and WD-40 domain protein 2	AK009893|Fbxw2|30050|F-box and WD-40 domain protein 2
mm9_v1_chr7_-_133943848_133943969	0.0577172	HNF4A_NR2F1,2.p2	AK154295|Aldoa|11674|aldolase A, fructose-bisphosphate	NM_001177308|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr10_+_86148239_86148360	0.057064	HNF4A_NR2F1,2.p2	AK019015|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK007490|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK017634|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK012122|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene	AK090016|1810014B01Rik|66263|RIKEN cDNA 1810014B01 gene
mm9_v1_chr4_-_58566053_58566195	0.0554882	HNF4A_NR2F1,2.p2	BC025425|Lpar1|14745|lysophosphatidic acid receptor 1	AK030330|Lpar1|14745|lysophosphatidic acid receptor 1	NM_172989|Lpar1|14745|lysophosphatidic acid receptor 1
mm9_v1_chr7_-_127821033_127821198	0.0548581	HNF4A_NR2F1,2.p2	AK034016|9030407P20Rik|71568|RIKEN cDNA 9030407P20 gene	AK018490|9030407P20Rik|71568|RIKEN cDNA 9030407P20 gene
mm9_v1_chr2_+_83564607_83564841	0.0547719	HNF4A_NR2F1,2.p2	AK140647|Itgav|16410|integrin alpha V	AK080357|Itgav|16410|integrin alpha V	AK020674|Itgav|16410|integrin alpha V	AK149984|Itgav|16410|integrin alpha V	U14135|Itgav|16410|integrin alpha V	BC021600|Itgav|16410|integrin alpha V	BC133682|Itgav|16410|integrin alpha V
mm9_v1_chr5_+_117807290_117807469	0.054003	HNF4A_NR2F1,2.p2	AK080976|Wsb2|59043|WD repeat and SOCS box-containing 2	BC055100|Wsb2|59043|WD repeat and SOCS box-containing 2	NM_021539|Wsb2|59043|WD repeat and SOCS box-containing 2	AK157999|Wsb2|59043|WD repeat and SOCS box-containing 2	AF072881|Wsb2|59043|WD repeat and SOCS box-containing 2	AF033188|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chr18_-_65553541_65553541	0.0537859	HNF4A_NR2F1,2.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr2_-_130223285_130223364	0.0526075	HNF4A_NR2F1,2.p2	BC003713|Cpxm1|56264|carboxypeptidase X 1 (M14 family)	AF077738|Cpxm1|56264|carboxypeptidase X 1 (M14 family)	NM_019696|Cpxm1|56264|carboxypeptidase X 1 (M14 family)
mm9_v1_chr4_+_115500670_115500814	0.0518211	HNF4A_NR2F1,2.p2	AK084014|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	AK148476|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	NM_175308|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC099740|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC137587|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)	BC137589|Mobkl2c|100465|MOB1, Mps One Binder kinase activator-like 2C (yeast)
mm9_v1_chr2_-_152158370_152158374	0.0516463	HNF4A_NR2F1,2.p2	BC034555|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	NM_019705|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1
mm9_v1_chr19_-_61302538_61302607	0.0503405	HNF4A_NR2F1,2.p2	AK135114|Csf2ra|12982|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
mm9_v1_chr7_-_88851798_88851810	0.0496461	HNF4A_NR2F1,2.p2	AK163423|Homer2|26557|homer homolog 2 (Drosophila)	NM_001164086|Homer2|26557|homer homolog 2 (Drosophila)	NM_011983|Homer2|26557|homer homolog 2 (Drosophila)
mm9_v1_chr11_+_70471347_70471375	0.04931	HNF4A_NR2F1,2.p2	CT010193|Eno3|13808|enolase 3, beta muscle
mm9_v1_chr10_+_86520790_86520790	0.0491225	HNF4A_NR2F1,2.p2	NM_029685|1700113H08Rik|76640|RIKEN cDNA 1700113H08 gene
mm9_v1_chr7_+_53289198_53289316	0.0487724	HNF4A_NR2F1,2.p2	AK080754|Nomo1|211548|nodal modulator 1	AK082963|Nomo1|211548|nodal modulator 1	AK165643|Nomo1|211548|nodal modulator 1
mm9_v1_chr11_-_77326748_77326921	0.0483066	HNF4A_NR2F1,2.p2	BC147324|Trp53i13|216964|transformation related protein 53 inducible protein 13	BC147325|Trp53i13|216964|transformation related protein 53 inducible protein 13	NM_001024920|Trp53i13|216964|transformation related protein 53 inducible protein 13
mm9_v1_chr18_-_66451420_66451491	0.0458941	HNF4A_NR2F1,2.p2	AK039742|Ccbe1|320924|collagen and calcium binding EGF domains 1	BC103803|Ccbe1|320924|collagen and calcium binding EGF domains 1	BC152322|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK220435|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK035153|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK028377|Ccbe1|320924|collagen and calcium binding EGF domains 1	NM_178793|Ccbe1|320924|collagen and calcium binding EGF domains 1
mm9_v1_chr8_+_54597026_54597158	0.0456576	HNF4A_NR2F1,2.p2	NM_001005847|Aga|11593|aspartylglucosaminidase	BC132227|Aga|11593|aspartylglucosaminidase	BC132229|Aga|11593|aspartylglucosaminidase	BC145297|Aga|11593|aspartylglucosaminidase	S81393|Aga|11593|aspartylglucosaminidase	BC048230|Aga|11593|aspartylglucosaminidase
mm9_v1_chr11_+_5662121_5662197	0.0451165	HNF4A_NR2F1,2.p2	AK009198|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	AK005556|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	AK008730|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	BC052911|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene	BC094935|2210015D19Rik|76508|RIKEN cDNA 2210015D19 gene
mm9_v1_chr2_+_166840778_166840830	0.0444051	HNF4A_NR2F1,2.p2	AK138442|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	AK146469|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	AK134274|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC024730|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC024981|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	BC033398|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	NM_153065|Ddx27|228889|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
mm9_v1_chr16_-_22439642_22439745	0.0423906	HNF4A_NR2F1,2.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr8_+_116963591_116963600	0.0418889	HNF4A_NR2F1,2.p2	AK019911|Wwox|80707|WW domain-containing oxidoreductase	BC014716|Wwox|80707|WW domain-containing oxidoreductase	AK078528|Wwox|80707|WW domain-containing oxidoreductase	AF187014|Wwox|80707|WW domain-containing oxidoreductase
mm9_v1_chr5_+_125048757_125048805	0.04154	HNF4A_NR2F1,2.p2	AK031829|Tctn2|67978|tectonic family member 2	NM_026486|Tctn2|67978|tectonic family member 2	DQ278869|Tctn2|67978|tectonic family member 2	AK012720|Tctn2|67978|tectonic family member 2	AK014476|Tctn2|67978|tectonic family member 2	AK165102|Tctn2|67978|tectonic family member 2	AK083080|Tctn2|67978|tectonic family member 2	AK032378|Tctn2|67978|tectonic family member 2	AK087856|Tctn2|67978|tectonic family member 2	BC058375|Tctn2|67978|tectonic family member 2
mm9_v1_chr2_+_83564553_83564598	0.0409689	HNF4A_NR2F1,2.p2	NM_008402|Itgav|16410|integrin alpha V
mm9_v1_chr2_+_32218529_32218697	0.0407866	HNF4A_NR2F1,2.p2	AK165687|Ciz1|68379|CDKN1A interacting zinc finger protein 1	AK137961|Ciz1|68379|CDKN1A interacting zinc finger protein 1
mm9_v1_chr2_-_75542535_75542545	0.0400349	HNF4A_NR2F1,2.p2	BC057948|Nfe2l2|18024|nuclear factor, erythroid derived 2, like 2
mm9_v1_chrX_+_132758579_132758588	0.038206	HNF4A_NR2F1,2.p2	NM_001127169|Tceal7|100040972|transcription elongation factor A (SII)-like 7	AK003800|Tceal7|100040972|transcription elongation factor A (SII)-like 7
mm9_v1_chr5_+_31172103_31172117	0.0376933	HNF4A_NR2F1,2.p2	BC026651|Tmem214|68796|transmembrane protein 214
mm9_v1_chr9_-_103267867_103268006	0.0367422	HNF4A_NR2F1,2.p2	AF215660|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	AF320340|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	L22067|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	BC096479|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	BC062156|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	BC052770|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3	AK010956|Cdv3|321022|carnitine deficiency-associated gene expressed in ventricle 3
mm9_v1_chr18_-_31769504_31769590	0.0366034	HNF4A_NR2F1,2.p2	BC020087|Slc25a46|67453|solute carrier family 25, member 46	AK030346|Slc25a46|67453|solute carrier family 25, member 46	AK031117|Slc25a46|67453|solute carrier family 25, member 46	AK160834|Slc25a46|67453|solute carrier family 25, member 46	NM_026165|Slc25a46|67453|solute carrier family 25, member 46	AK004625|Slc25a46|67453|solute carrier family 25, member 46	AK008131|Slc25a46|67453|solute carrier family 25, member 46	AK078383|Slc25a46|67453|solute carrier family 25, member 46	AK147936|Slc25a46|67453|solute carrier family 25, member 46
mm9_v1_chr1_-_75132977_75133049	0.0365003	HNF4A_NR2F1,2.p2	AK209717|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK183285|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK180897|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr19_+_32832002_32832163	0.0359502	HNF4A_NR2F1,2.p2	NM_008960|Pten|19211|phosphatase and tensin homolog	AK164302|Pten|19211|phosphatase and tensin homolog	AK088717|Pten|19211|phosphatase and tensin homolog	AK076980|Pten|19211|phosphatase and tensin homolog
mm9_v1_chr16_-_35939001_35939021	0.035013	HNF4A_NR2F1,2.p2	AK090152|Dtx3l|209200|deltex 3-like (Drosophila)	BC085093|Dtx3l|209200|deltex 3-like (Drosophila)	AK146802|Dtx3l|209200|deltex 3-like (Drosophila)
mm9_v1_chr4_+_151648348_151648470	0.0349193	HNF4A_NR2F1,2.p2	NM_178406|Gpr153|100129|G protein-coupled receptor 153
mm9_v1_chr8_+_70047752_70047752	0.0343938	HNF4A_NR2F1,2.p2	AK077364|Nat3|17962|N-acetyltransferase 3	NM_008674|Nat3|17962|N-acetyltransferase 3
mm9_v1_chr10_+_62706600_62706895	0.034067	HNF4A_NR2F1,2.p2	AK147723|Herc4|67345|hect domain and RLD 4	AK143111|Herc4|67345|hect domain and RLD 4	AK009436|Herc4|67345|hect domain and RLD 4	BC043082|Herc4|67345|hect domain and RLD 4	NM_026101|Herc4|67345|hect domain and RLD 4	AK020652|Herc4|67345|hect domain and RLD 4
mm9_v1_chr3_-_54858963_54858976	0.0335364	HNF4A_NR2F1,2.p2	AK077114|Ccna1|12427|cyclin A1	NM_007628|Ccna1|12427|cyclin A1	X84311|Ccna1|12427|cyclin A1
mm9_v1_chr14_-_56778401_56778415	0.0334013	HNF4A_NR2F1,2.p2	J02872|Gzmg|14944|granzyme G	BC099473|Gzmg|14944|granzyme G	NM_010375|Gzmg|14944|granzyme G
mm9_v1_chr8_+_81552335_81552485	0.0333256	HNF4A_NR2F1,2.p2	BC094552|Zfp827|622675|zinc finger protein 827	NM_178267|Zfp827|622675|zinc finger protein 827	BC151183|Zfp827|622675|zinc finger protein 827	AK154905|Zfp827|622675|zinc finger protein 827
mm9_v1_chr2_-_91516101_91516113	0.0330955	HNF4A_NR2F1,2.p2	BC024457|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr3_-_90237092_90237456	0.0330211	HNF4A_NR2F1,2.p2	BC055344|Ints3|229543|integrator complex subunit 3	AK033296|Ints3|229543|integrator complex subunit 3	AK146699|Ints3|229543|integrator complex subunit 3
mm9_v1_chr6_-_86683191_86683319	0.032906	HNF4A_NR2F1,2.p2	AF186095|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AK132788|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AF282322|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)	AF163665|Gmcl1|23885|germ cell-less homolog 1 (Drosophila)
mm9_v1_chr11_+_21138879_21139023	0.0329043	HNF4A_NR2F1,2.p2	NM_139061|Vps54|245944|vacuolar protein sorting 54 (yeast)
mm9_v1_chr2_+_162843196_162843279	0.0327038	HNF4A_NR2F1,2.p2	AK160745|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	AK088467|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	NM_172150|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	AK144188|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)	BC037708|Ift52|245866|intraflagellar transport 52 homolog (Chlamydomonas)
mm9_v1_chr3_+_38785861_38785861	0.0326497	HNF4A_NR2F1,2.p2	DQ286572|Fat4|329628|FAT tumor suppressor homolog 4 (Drosophila)	NM_183221|Fat4|329628|FAT tumor suppressor homolog 4 (Drosophila)
mm9_v1_chr16_-_98183757_98183799	0.0318115	HNF4A_NR2F1,2.p2	BC051176|Zfp295|114565|zinc finger protein 295	AK129313|Zfp295|114565|zinc finger protein 295	AK031118|Zfp295|114565|zinc finger protein 295	AK080932|Zfp295|114565|zinc finger protein 295	AK145072|Zfp295|114565|zinc finger protein 295	AK034057|Zfp295|114565|zinc finger protein 295	NM_001081684|Zfp295|114565|zinc finger protein 295	NM_001081685|Zfp295|114565|zinc finger protein 295	NM_175428|Zfp295|114565|zinc finger protein 295	AK170928|Zfp295|114565|zinc finger protein 295
mm9_v1_chr5_-_46248719_46248778	0.0317287	HNF4A_NR2F1,2.p2	BC066151|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK041987|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK043498|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK154398|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK155421|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK083689|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK043845|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	BC138563|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_001163073|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_178142|Lcorl|209707|ligand dependent nuclear receptor corepressor-like
mm9_v1_chr13_+_33576658_33576683	0.0311661	HNF4A_NR2F1,2.p2	AK005394|Serpinb9g|93806|serine (or cysteine) peptidase inhibitor, clade B, member 9g	NM_011455|Serpinb9g|93806|serine (or cysteine) peptidase inhibitor, clade B, member 9g	AF425083|Serpinb9g|93806|serine (or cysteine) peptidase inhibitor, clade B, member 9g	BC064758|Serpinb9g|93806|serine (or cysteine) peptidase inhibitor, clade B, member 9g	BC064759|Serpinb9g|93806|serine (or cysteine) peptidase inhibitor, clade B, member 9g
mm9_v1_chr2_+_31951030_31951062	0.0300821	HNF4A_NR2F1,2.p2	AK134638|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr6_-_72330414_72330474	0.0299641	HNF4A_NR2F1,2.p2	BC086925|Vamp5|53620|vesicle-associated membrane protein 5	AK009266|Vamp5|53620|vesicle-associated membrane protein 5	NM_001080742|Vamp5|53620|vesicle-associated membrane protein 5	NM_016872|Vamp5|53620|vesicle-associated membrane protein 5
mm9_v1_chr7_+_21357946_21357946	0.0297244	HNF4A_NR2F1,2.p2	NM_001166754|Vmn1r157|667551|vomeronasal 1 receptor 157	NM_001166845|Vmn1r109|100043559|vomeronasal 1 receptor 109
mm9_v1_chr10_+_80586394_80586698	0.0296061	HNF4A_NR2F1,2.p2	AK140101|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK192399|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK202988|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK212487|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK216389|Map2k2|26396|mitogen-activated protein kinase kinase 2
mm9_v1_chr15_-_79158357_79158407	0.0290578	HNF4A_NR2F1,2.p2	BC057209|Pla2g6|53357|phospholipase A2, group VI	AK183678|Pla2g6|53357|phospholipase A2, group VI
mm9_v1_chr16_+_23224889_23224926	0.0273984	HNF4A_NR2F1,2.p2	BC096026|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1	AF153680|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr1_+_58502359_58502380	0.0265185	HNF4A_NR2F1,2.p2	AK076788|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)	AK003978|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)	AK154815|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)
mm9_v1_chr11_-_87639611_87639615	0.0258694	HNF4A_NR2F1,2.p2	BC016212|Lpo|76113|lactoperoxidase	NM_080420|Lpo|76113|lactoperoxidase
mm9_v1_chr10_+_21705909_21705909	0.0248295	HNF4A_NR2F1,2.p2	NM_001161848|Sgk1|20393|serum/glucocorticoid regulated kinase 1
mm9_v1_chrX_+_10294707_10294726	0.024392	HNF4A_NR2F1,2.p2	AK131619|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	AK014143|Mid1ip1|68041|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm9_v1_chr19_-_32182638_32182709	0.0243424	HNF4A_NR2F1,2.p2	AB037111|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK080951|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK041937|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK047692|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK046540|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK166100|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK034493|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr17_+_25910720_25910771	0.0240157	HNF4A_NR2F1,2.p2	AK145408|Narfl|67563|nuclear prelamin A recognition factor-like	NM_026238|Narfl|67563|nuclear prelamin A recognition factor-like	AK014038|Narfl|67563|nuclear prelamin A recognition factor-like	AK043694|Narfl|67563|nuclear prelamin A recognition factor-like	AK018548|Narfl|67563|nuclear prelamin A recognition factor-like	BC052830|Narfl|67563|nuclear prelamin A recognition factor-like	BC020468|Narfl|67563|nuclear prelamin A recognition factor-like	BC025108|Narfl|67563|nuclear prelamin A recognition factor-like
mm9_v1_chr19_+_55390850_55390853	0.0232432	HNF4A_NR2F1,2.p2	AK004751|Vti1a|53611|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)
mm9_v1_chr7_-_4817767_4817818	0.0230873	HNF4A_NR2F1,2.p2	BC049278|Isoc2b|67441|isochorismatase domain containing 2b	AK002905|Isoc2b|67441|isochorismatase domain containing 2b	NM_026158|Isoc2b|67441|isochorismatase domain containing 2b
mm9_v1_chr11_+_57822347_57822565	0.0224112	HNF4A_NR2F1,2.p2	NM_028451|Larp1|73158|La ribonucleoprotein domain family, member 1
mm9_v1_chr7_+_28390872_28390878	0.0208342	HNF4A_NR2F1,2.p2	BC026151|Akt2|11652|thymoma viral proto-oncogene 2	NM_007434|Akt2|11652|thymoma viral proto-oncogene 2
mm9_v1_chr8_+_95198187_95198300	0.0208119	HNF4A_NR2F1,2.p2	AK035140|Irx6|64379|Iroquois related homeobox 6 (Drosophila)	AK053729|Irx6|64379|Iroquois related homeobox 6 (Drosophila)	NM_022428|Irx6|64379|Iroquois related homeobox 6 (Drosophila)
mm9_v1_chr16_+_23224955_23224980	0.0191931	HNF4A_NR2F1,2.p2	AK084124|St6gal1|20440|beta galactoside alpha 2,6 sialyltransferase 1
mm9_v1_chr15_+_97938874_97939027	0.0190205	HNF4A_NR2F1,2.p2	NM_001163487|Pfkm|18642|phosphofructokinase, muscle	D21867|Pfkm|18642|phosphofructokinase, muscle	AK049773|Pfkm|18642|phosphofructokinase, muscle	AK002711|Pfkm|18642|phosphofructokinase, muscle
mm9_v1_chr7_-_52636246_52636362	0.0183423	HNF4A_NR2F1,2.p2	BC058513|Snrnp70|20637|small nuclear ribonucleoprotein 70 (U1)
mm9_v1_chrX_+_100609805_100609820	0.0182231	HNF4A_NR2F1,2.p2	BC048493|Tsx|22127|testis specific X-linked gene	NM_009440|Tsx|22127|testis specific X-linked gene	X99796|Tsx|22127|testis specific X-linked gene
mm9_v1_chr1_-_31006461_31006538	0.0169862	HNF4A_NR2F1,2.p2	BC094447|Ptp4a1|19243|protein tyrosine phosphatase 4a1	BC003761|Ptp4a1|19243|protein tyrosine phosphatase 4a1	BC031734|Ptp4a1|19243|protein tyrosine phosphatase 4a1
mm9_v1_chr11_-_69793943_69794050	0.0159	HNF4A_NR2F1,2.p2	BC003752|Rai12|54351|retinoic acid induced 12	AF004107|Rai12|54351|retinoic acid induced 12
mm9_v1_chr3_+_103613439_103613567	0.0146581	HNF4A_NR2F1,2.p2	NM_001163552|Ap4b1|67489|adaptor-related protein complex AP-4, beta 1	NM_001163553|Ap4b1|67489|adaptor-related protein complex AP-4, beta 1	NM_026193|Ap4b1|67489|adaptor-related protein complex AP-4, beta 1	BC054092|Ap4b1|67489|adaptor-related protein complex AP-4, beta 1	AK165570|Ap4b1|67489|adaptor-related protein complex AP-4, beta 1	AK007733|Ap4b1|67489|adaptor-related protein complex AP-4, beta 1	BC056200|Ap4b1|67489|adaptor-related protein complex AP-4, beta 1
mm9_v1_chr9_-_62994774_62994817	0.0146484	HNF4A_NR2F1,2.p2	BC138063|Skor1|207667|SKI family transcriptional corepressor 1	AK049035|Skor1|207667|SKI family transcriptional corepressor 1	NM_172446|Skor1|207667|SKI family transcriptional corepressor 1	AK134840|Skor1|207667|SKI family transcriptional corepressor 1	AB185113|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163755|Skor1|207667|SKI family transcriptional corepressor 1	NM_001163757|Skor1|207667|SKI family transcriptional corepressor 1
mm9_v1_chr4_-_129118091_129118098	0.0133541	HNF4A_NR2F1,2.p2	AK132152|Zbtb8b|215627|zinc finger and BTB domain containing 8b
mm9_v1_chr1_+_74283381_74283464	0.0130969	HNF4A_NR2F1,2.p2	AK083263|Arpc2|76709|actin related protein 2/3 complex, subunit 2
mm9_v1_chr1_-_83035005_83035022	0.0125759	HNF4A_NR2F1,2.p2	BC109154|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	BC109155|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	AK098112|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	AF271634|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3	NM_030556|Slc19a3|80721|solute carrier family 19 (sodium/hydrogen exchanger), member 3
mm9_v1_chrX_+_69467355_69467355	0.0122562	HNF4A_NR2F1,2.p2	BC104088|Magea4|17140|melanoma antigen, family A, 4	BC104089|Magea4|17140|melanoma antigen, family A, 4	NM_020280|Magea4|17140|melanoma antigen, family A, 4
mm9_v1_chr1_-_171899306_171899335	0.0117754	HNF4A_NR2F1,2.p2	Y15733|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	AK077914|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	NM_010476|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7
mm9_v1_chr2_+_31951149_31951239	0.0109245	HNF4A_NR2F1,2.p2	AK052883|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	NM_145521|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	BC016136|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr7_+_134355120_134355124	0.0104827	HNF4A_NR2F1,2.p2	AK010483|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle	NM_016754|Mylpf|17907|myosin light chain, phosphorylatable, fast skeletal muscle
mm9_v1_chr4_+_105988790_105988840	0.0103956	HNF4A_NR2F1,2.p2	NM_183225|Usp24|329908|ubiquitin specific peptidase 24	AK045043|Usp24|329908|ubiquitin specific peptidase 24
mm9_v1_chr1_-_163089444_163089444	0.0100175	HNF4A_NR2F1,2.p2	AK015528|4930469G21Rik|74933|RIKEN cDNA 4930469G21 gene	NM_001195189|4930469G21Rik|74933|RIKEN cDNA 4930469G21 gene
mm9_v1_chr2_+_103810274_103810481	0.00979688	HNF4A_NR2F1,2.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chr8_-_72411261_72411294	0.00958969	HNF4A_NR2F1,2.p2	BC006187|Cilp2|68709|cartilage intermediate layer protein 2	NM_026818|Cilp2|68709|cartilage intermediate layer protein 2
mm9_v1_chr12_+_103707401_103707414	0.0089924	HNF4A_NR2F1,2.p2	BC016883|Golga5|27277|golgi autoantigen, golgin subfamily a, 5
mm9_v1_chr4_-_129118034_129118085	0.0086251	HNF4A_NR2F1,2.p2	BC023839|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK140914|Zbtb8b|215627|zinc finger and BTB domain containing 8b	AK163930|Zbtb8b|215627|zinc finger and BTB domain containing 8b	NM_153541|Zbtb8b|215627|zinc finger and BTB domain containing 8b
mm9_v1_chr1_-_75313567_75313600	0.00627946	HNF4A_NR2F1,2.p2	AK052001|Dnpep|13437|aspartyl aminopeptidase	NM_016878|Dnpep|13437|aspartyl aminopeptidase
mm9_v1_chr4_-_132066370_132066424	0.00609771	HNF4A_NR2F1,2.p2	BC005672|Sesn2|230784|sestrin 2	NM_144907|Sesn2|230784|sestrin 2	AK170228|Sesn2|230784|sestrin 2	AK170547|Sesn2|230784|sestrin 2	AK143788|Sesn2|230784|sestrin 2
mm9_v1_chr2_+_31007833_31007940	0.00569303	HNF4A_NR2F1,2.p2	NM_178760|Gpr107|277463|G protein-coupled receptor 107	AK082237|Gpr107|277463|G protein-coupled receptor 107	AK030433|Gpr107|277463|G protein-coupled receptor 107	AK154530|Gpr107|277463|G protein-coupled receptor 107	AK083025|Gpr107|277463|G protein-coupled receptor 107	AK088544|Gpr107|277463|G protein-coupled receptor 107	AK034815|Gpr107|277463|G protein-coupled receptor 107	BC117900|Gpr107|277463|G protein-coupled receptor 107	BC117901|Gpr107|277463|G protein-coupled receptor 107	BC092231|Gpr107|277463|G protein-coupled receptor 107	AK036987|Gpr107|277463|G protein-coupled receptor 107	AK142454|Gpr107|277463|G protein-coupled receptor 107	AK129407|Gpr107|277463|G protein-coupled receptor 107
mm9_v1_chr16_-_88627910_88627910	0.00549042	HNF4A_NR2F1,2.p2	AK010217|2310079G19Rik|69699|RIKEN cDNA 2310079G19 gene	NM_027173|2310079G19Rik|69699|RIKEN cDNA 2310079G19 gene
mm9_v1_chr17_-_13898366_13898400	0.00547346	HNF4A_NR2F1,2.p2	AK012419|2700054A10Rik|72578|RIKEN cDNA 2700054A10 gene	AK005879|Tcte2|21646|t-complex-associated testis expressed 2	AK008572|Tcte2|21646|t-complex-associated testis expressed 2	BC049646|Tcte2|21646|t-complex-associated testis expressed 2	BC092528|Tcte2|21646|t-complex-associated testis expressed 2	NM_022311|Tcte2|21646|t-complex-associated testis expressed 2
mm9_v1_chr13_-_21384553_21384554	0.00507715	HNF4A_NR2F1,2.p2	AK029731|Gpx5|14780|glutathione peroxidase 5	BC100749|Gpx5|14780|glutathione peroxidase 5	BC103588|Gpx5|14780|glutathione peroxidase 5	BC103589|Gpx5|14780|glutathione peroxidase 5	BC105648|Gpx5|14780|glutathione peroxidase 5	NM_010343|Gpx5|14780|glutathione peroxidase 5
mm9_v1_chr4_+_98860798_98860903	0.00474003	HNF4A_NR2F1,2.p2	NM_001145967|Atg4c|242557|autophagy-related 4C (yeast)	AK156463|Atg4c|242557|autophagy-related 4C (yeast)	AK134838|Atg4c|242557|autophagy-related 4C (yeast)	AK170747|Atg4c|242557|autophagy-related 4C (yeast)
mm9_v1_chr17_-_9862538_9862568	0.00464969	HNF4A_NR2F1,2.p2	BC113177|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6	AK029765|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6	AK016578|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6	NM_001163836|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6
mm9_v1_chr18_+_34380575_34380671	0.0037183	HNF4A_NR2F1,2.p2	AK042021|Apc|11789|adenomatosis polyposis coli	AK080907|Apc|11789|adenomatosis polyposis coli	NM_007462|Apc|11789|adenomatosis polyposis coli	AK046280|Apc|11789|adenomatosis polyposis coli	AK045053|Apc|11789|adenomatosis polyposis coli
mm9_v1_chr11_-_40508405_40508442	0.00348066	HNF4A_NR2F1,2.p2	AK075600|Mat2b|108645|methionine adenosyltransferase II, beta	AK075947|Mat2b|108645|methionine adenosyltransferase II, beta	AK162087|Mat2b|108645|methionine adenosyltransferase II, beta
mm9_v1_chr4_-_62021515_62021538	0.00339469	HNF4A_NR2F1,2.p2	BC137706|Fkbp15|338355|FK506 binding protein 15	AK049459|Fkbp15|338355|FK506 binding protein 15	AK082565|Fkbp15|338355|FK506 binding protein 15
mm9_v1_chr12_-_88225200_88225353	0.00290777	HNF4A_NR2F1,2.p2	BC057128|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene	BC063253|6430527G18Rik|238330|RIKEN cDNA 6430527G18 gene
mm9_v1_chr1_-_75132608_75132617	0.0028444	HNF4A_NR2F1,2.p2	AK188612|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK199117|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK200010|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK210625|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr5_+_137960107_137960139	0.0022141	HNF4A_NR2F1,2.p2	AY176042|Gigyf1|57330|GRB10 interacting GYF protein 1	NM_031408|Gigyf1|57330|GRB10 interacting GYF protein 1	BC052875|Gigyf1|57330|GRB10 interacting GYF protein 1
mm9_v1_chr2_-_35960774_35960927	0.00217604	HNF4A_NR2F1,2.p2	AK090339|Lhx6|16874|LIM homeobox protein 6	AJ000337|Lhx6|16874|LIM homeobox protein 6	AK140987|Lhx6|16874|LIM homeobox protein 6	NM_001083125|Lhx6|16874|LIM homeobox protein 6	NM_008500|Lhx6|16874|LIM homeobox protein 6
mm9_v1_chr17_-_26102449_26102449	0.00206119	HNF4A_NR2F1,2.p2	NM_015830|Solh|50817|small optic lobes homolog (Drosophila)
mm9_v1_chr14_+_21513864_21513981	0.00052004	HNF4A_NR2F1,2.p2	
mm9_v1_chr10_-_61949345_61949552	0.000478161	HNF4A_NR2F1,2.p2	AK028096|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	NM_001113355|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK086851|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK150244|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK151360|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	BC007148|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK149859|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	BC058236|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK147989|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK152424|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK165853|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	S41204|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK159783|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK167592|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK168537|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	AK168213|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)	NM_133672|Vps26a|30930|vacuolar protein sorting 26 homolog A (yeast)
