mm9_v1_chr1_+_154802144_154802177	19.4687	NFIX.p2	AK129155|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr1_+_154802198_154802230	18.3808	NFIX.p2	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr12_+_30687597_30687686	18.1882	NFIX.p2	BC037709|Pxdn|69675|peroxidasin homolog (Drosophila)
mm9_v1_chr1_+_154802091_154802137	16.2541	NFIX.p2	AK084041|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	AK083532|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr7_+_138079669_138079779	13.731	NFIX.p2	NM_019564|Htra1|56213|HtrA serine peptidase 1	AK128916|Htra1|56213|HtrA serine peptidase 1	AK132270|Htra1|56213|HtrA serine peptidase 1	AF179369|Htra1|56213|HtrA serine peptidase 1	AF172994|Htra1|56213|HtrA serine peptidase 1	BC013516|Htra1|56213|HtrA serine peptidase 1
mm9_v1_chr10_-_79602040_79602141	12.757	NFIX.p2	AK137009|Dos|100503659|downstream of Stk11
mm9_v1_chr18_-_33623400_33623430	11.6159	NFIX.p2	NM_001109989|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr13_-_34222209_34222227	10.9448	NFIX.p2	BC138935|Tubb2b|73710|tubulin, beta 2B	BC138936|Tubb2b|73710|tubulin, beta 2B	AK168908|Tubb2b|73710|tubulin, beta 2B	AK010786|Tubb2b|73710|tubulin, beta 2B	NM_023716|Tubb2b|73710|tubulin, beta 2B
mm9_v1_chr18_-_33623287_33623340	10.551	NFIX.p2	NM_053078|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr18_-_33623668_33623692	10.3864	NFIX.p2	NM_001109988|D0H4S114|27528|DNA segment, human D4S114
mm9_v1_chr1_+_94728217_94728298	10.3715	NFIX.p2	AK154899|Gpc1|14733|glypican 1	AF185613|Gpc1|14733|glypican 1	NM_016696|Gpc1|14733|glypican 1
mm9_v1_chr6_-_124807733_124807764	9.99272	NFIX.p2	AK140962|Leprel2|14789|leprecan-like 2
mm9_v1_chr17_-_23814399_23814413	9.96354	NFIX.p2	BC025860|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AF156164|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005382|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005530|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr1_+_94728419_94728433	9.8908	NFIX.p2	BC062902|Gpc1|14733|glypican 1
mm9_v1_chr17_-_23814415_23814446	9.75734	NFIX.p2	AK160136|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_001161746|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_013749|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr10_+_24315247_24315401	8.59567	NFIX.p2	NM_010217|Ctgf|14219|connective tissue growth factor	BC006783|Ctgf|14219|connective tissue growth factor	M80263|Ctgf|14219|connective tissue growth factor	M70642|Ctgf|14219|connective tissue growth factor
mm9_v1_chr16_-_85173978_85173998	8.5283	NFIX.p2	AK147543|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr16_-_85173851_85173917	8.44871	NFIX.p2	X59379|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr7_-_52347489_52347600	8.44429	NFIX.p2	BC092069|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK077943|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK082762|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK086705|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	AK132143|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC025602|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	BC055903|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain	NM_026555|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain
mm9_v1_chr7_-_106501642_106501748	8.21191	NFIX.p2	AK077937|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	NM_001111043|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	NM_001111044|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	NM_009825|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm9_v1_chr13_-_69878721_69878801	7.93833	NFIX.p2	NM_001145162|Ube2ql1|76980|ubiquitin-conjugating enzyme E2Q family-like 1
mm9_v1_chrX_+_132528317_132528387	7.87106	NFIX.p2	AK018307|6530401D17Rik|76219|RIKEN cDNA 6530401D17 gene	NM_029823|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	AK013740|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	BC030351|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene	AK077432|2900062L11Rik|76976|RIKEN cDNA 2900062L11 gene
mm9_v1_chr7_-_52347012_52347061	7.70599	NFIX.p2	BC005487|Rcn3|52377|reticulocalbin 3, EF-hand calcium binding domain
mm9_v1_chr11_-_4060222_4060295	7.68976	NFIX.p2	AK076934|Ccdc157|216516|coiled-coil domain containing 157	AK143216|Ccdc157|216516|coiled-coil domain containing 157	AK220409|Ccdc157|216516|coiled-coil domain containing 157	AK133165|Ccdc157|216516|coiled-coil domain containing 157	NM_001164620|Ccdc157|216516|coiled-coil domain containing 157	NM_177616|Ccdc157|216516|coiled-coil domain containing 157
mm9_v1_chrX_+_132567905_132567926	7.23467	NFIX.p2	NM_029541|6530401D17Rik|76219|RIKEN cDNA 6530401D17 gene	BC016270|6530401D17Rik|76219|RIKEN cDNA 6530401D17 gene
mm9_v1_chr11_+_61318701_61318705	7.17601	NFIX.p2	BC008113|B9d1|27078|B9 protein domain 1
mm9_v1_chr16_-_85173944_85173969	7.07906	NFIX.p2	AK159245|App|11820|amyloid beta (A4) precursor protein	BC070409|App|11820|amyloid beta (A4) precursor protein	AK133639|App|11820|amyloid beta (A4) precursor protein	AK159352|App|11820|amyloid beta (A4) precursor protein	AK030583|App|11820|amyloid beta (A4) precursor protein	AK128971|App|11820|amyloid beta (A4) precursor protein	NM_001198823|App|11820|amyloid beta (A4) precursor protein	NM_001198824|App|11820|amyloid beta (A4) precursor protein	NM_001198825|App|11820|amyloid beta (A4) precursor protein	NM_001198826|App|11820|amyloid beta (A4) precursor protein	NM_007471|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr13_-_78338131_78338242	6.75707	NFIX.p2	BC108408|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	X74134|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1	NM_010151|Nr2f1|13865|nuclear receptor subfamily 2, group F, member 1
mm9_v1_chr18_-_16966954_16967033	6.74021	NFIX.p2	AK087418|Cdh2|12558|cadherin 2	BC022107|Cdh2|12558|cadherin 2	AK032826|Cdh2|12558|cadherin 2
mm9_v1_chr12_+_110783786_110783839	6.73599	NFIX.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr2_-_151458256_151458277	6.68411	NFIX.p2	AK032279|Snph|241727|syntaphilin	AK122262|Snph|241727|syntaphilin	NM_198214|Snph|241727|syntaphilin
mm9_v1_chr10_+_28863801_28863929	6.65593	NFIX.p2	NM_026138|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene	AK030682|6330407J23Rik|67412|RIKEN cDNA 6330407J23 gene
mm9_v1_chr15_+_32850477_32850629	6.63902	NFIX.p2	NM_008304|Sdc2|15529|syndecan 2	U00674|Sdc2|15529|syndecan 2	BC047144|Sdc2|15529|syndecan 2	AK011042|Sdc2|15529|syndecan 2
mm9_v1_chr7_-_106501620_106501629	6.49779	NFIX.p2	BC085143|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	J05609|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK029080|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK031457|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK076474|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK077660|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK077992|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK079460|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK086519|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK086523|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK089993|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK090103|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK159697|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK159998|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK166000|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK167403|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK169422|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1	AK168442|Serpinh1|12406|serine (or cysteine) peptidase inhibitor, clade H, member 1
mm9_v1_chr16_-_85173930_85173941	6.35559	NFIX.p2	AK159718|App|11820|amyloid beta (A4) precursor protein	M18373|App|11820|amyloid beta (A4) precursor protein	U84012|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr1_+_176431933_176432011	6.34598	NFIX.p2	BC094606|Fmn2|54418|formin 2	NM_019445|Fmn2|54418|formin 2	AF218940|Fmn2|54418|formin 2
mm9_v1_chr13_-_69138418_69138432	6.32703	NFIX.p2	AK132312|Adcy2|210044|adenylate cyclase 2	NM_153534|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr9_-_99336923_99337150	6.31798	NFIX.p2	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr11_+_61318645_61318683	6.27135	NFIX.p2	AK010355|B9d1|27078|B9 protein domain 1	AB030483|B9d1|27078|B9 protein domain 1	NM_013717|B9d1|27078|B9 protein domain 1	AK003038|B9d1|27078|B9 protein domain 1	AK131701|B9d1|27078|B9 protein domain 1
mm9_v1_chr10_-_80945445_80945464	6.19763	NFIX.p2	NM_176954|Celf5|319586|CUGBP, Elav-like family member 5
mm9_v1_chr1_-_63223190_63223282	6.01717	NFIX.p2	BC015300|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK166604|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK078590|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK167705|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK146814|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK036926|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK142711|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	BC006660|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr16_-_85173918_85173926	5.96833	NFIX.p2	AK161976|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr7_+_27092187_27092219	5.94715	NFIX.p2	BC063778|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4	NM_009997|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4	BC010761|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4
mm9_v1_chr2_+_32455168_32455228	5.94091	NFIX.p2	NM_001025311|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm9_v1_chr1_-_63223345_63223399	5.77321	NFIX.p2	NM_001160038|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160039|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_001160040|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	NM_145518|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr16_+_11066390_11066492	5.7669	NFIX.p2	NM_009223|Snn|20621|stannin	BC006961|Snn|20621|stannin	AK149685|Snn|20621|stannin	BC063027|Snn|20621|stannin	BC017685|Snn|20621|stannin
mm9_v1_chr17_-_14831095_14831102	5.68936	NFIX.p2	L07803|Thbs2|21826|thrombospondin 2	M64866|Thbs2|21826|thrombospondin 2	AK132508|Thbs2|21826|thrombospondin 2
mm9_v1_chr1_-_63223287_63223307	5.62128	NFIX.p2	AK034597|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr5_-_31456576_31456630	5.55367	NFIX.p2	BC013452|Mpv17|17527|MpV17 mitochondrial inner membrane protein	AK040477|Mpv17|17527|MpV17 mitochondrial inner membrane protein	M36411|Mpv17|17527|MpV17 mitochondrial inner membrane protein	NM_008622|Mpv17|17527|MpV17 mitochondrial inner membrane protein
mm9_v1_chr19_+_10057131_10057449	5.50763	NFIX.p2	AK147082|Fth1|14319|ferritin heavy chain 1	AK150679|Fth1|14319|ferritin heavy chain 1	AK153195|Fth1|14319|ferritin heavy chain 1	AK153199|Fth1|14319|ferritin heavy chain 1	AK151241|Fth1|14319|ferritin heavy chain 1	AK152542|Fth1|14319|ferritin heavy chain 1	NM_010239|Fth1|14319|ferritin heavy chain 1	AK027998|Fth1|14319|ferritin heavy chain 1	AK088935|Fth1|14319|ferritin heavy chain 1	AK139622|Fth1|14319|ferritin heavy chain 1	AK150262|Fth1|14319|ferritin heavy chain 1	AK150508|Fth1|14319|ferritin heavy chain 1	AK150628|Fth1|14319|ferritin heavy chain 1	AK150693|Fth1|14319|ferritin heavy chain 1	AK151192|Fth1|14319|ferritin heavy chain 1	AK151609|Fth1|14319|ferritin heavy chain 1	AK151675|Fth1|14319|ferritin heavy chain 1	AK152071|Fth1|14319|ferritin heavy chain 1	AK153017|Fth1|14319|ferritin heavy chain 1	AK168601|Fth1|14319|ferritin heavy chain 1	AK169004|Fth1|14319|ferritin heavy chain 1	AK159243|Fth1|14319|ferritin heavy chain 1	AK151399|Fth1|14319|ferritin heavy chain 1	BC011096|Fth1|14319|ferritin heavy chain 1	BC012314|Fth1|14319|ferritin heavy chain 1	J03941|Fth1|14319|ferritin heavy chain 1	M24509|Fth1|14319|ferritin heavy chain 1	X12812|Fth1|14319|ferritin heavy chain 1
mm9_v1_chr18_+_37821598_37821598	5.48634	NFIX.p2	AY013792|Pcdhga1|93709|protocadherin gamma subfamily A, 1	NM_033584|Pcdhga1|93709|protocadherin gamma subfamily A, 1
mm9_v1_chr12_+_110806715_110806837	5.42427	NFIX.p2	AK148955|Meg3|17263|maternally expressed 3
mm9_v1_chr12_+_110783593_110783620	5.3164	NFIX.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chr7_+_27620354_27620362	5.24284	NFIX.p2	AK149439|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	NM_007812|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	AK132617|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC138796|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC138798|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5
mm9_v1_chr10_-_80945379_80945426	5.23773	NFIX.p2	AK132321|Celf5|319586|CUGBP, Elav-like family member 5
mm9_v1_chr8_-_97666364_97666472	5.19309	NFIX.p2	AK166482|Kifc3|16582|kinesin family member C3	BC070429|Kifc3|16582|kinesin family member C3	NM_001145831|Kifc3|16582|kinesin family member C3	NM_010631|Kifc3|16582|kinesin family member C3	D49546|Kifc3|16582|kinesin family member C3
mm9_v1_chr6_-_55124983_55125038	5.15747	NFIX.p2	M88694|Inmt|21743|indolethylamine N-methyltransferase	NM_009349|Inmt|21743|indolethylamine N-methyltransferase	BC013518|Inmt|21743|indolethylamine N-methyltransferase	AK013010|Inmt|21743|indolethylamine N-methyltransferase	AK002281|Inmt|21743|indolethylamine N-methyltransferase
mm9_v1_chr17_-_25974021_25974145	5.11789	NFIX.p2	BC021549|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	NM_144816|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	AK140428|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)
mm9_v1_chr2_+_35547418_35547513	4.83119	NFIX.p2	AY305657|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein	NM_001001602|Dab2ip|69601|disabled homolog 2 (Drosophila) interacting protein
mm9_v1_chr6_+_34426324_34426351	4.79751	NFIX.p2	BC004589|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr11_+_104092809_104092902	4.78836	NFIX.p2	BC014748|Mapt|17762|microtubule-associated protein tau	U12914|Mapt|17762|microtubule-associated protein tau	U12915|Mapt|17762|microtubule-associated protein tau	U12916|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr6_+_34426288_34426319	4.71881	NFIX.p2	AK006315|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK043412|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr9_-_58388489_58388746	4.69392	NFIX.p2	AK031354|Cd276|102657|CD276 antigen	AY190318|Cd276|102657|CD276 antigen	BC019436|Cd276|102657|CD276 antigen	BC056608|Cd276|102657|CD276 antigen	NM_133983|Cd276|102657|CD276 antigen
mm9_v1_chr2_+_106533281_106533425	4.68138	NFIX.p2	AK165186|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr1_-_25886551_25886551	4.53301	NFIX.p2	BC099951|Bai3|210933|brain-specific angiogenesis inhibitor 3	NM_175642|Bai3|210933|brain-specific angiogenesis inhibitor 3
mm9_v1_chr7_+_27620380_27620397	4.50336	NFIX.p2	BC011233|Cyp2a4|13086|cytochrome P450, family 2, subfamily a, polypeptide 4	X89864|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC046605|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5	BC058743|Cyp2a5|13087|cytochrome P450, family 2, subfamily a, polypeptide 5
mm9_v1_chr7_+_29052821_29052973	4.46853	NFIX.p2	BC094513|Eid2|386655|EP300 interacting inhibitor of differentiation 2	NM_198425|Eid2|386655|EP300 interacting inhibitor of differentiation 2	AY251273|Eid2|386655|EP300 interacting inhibitor of differentiation 2
mm9_v1_chr9_-_121404799_121404856	4.36892	NFIX.p2	NM_031161|Cck|12424|cholecystokinin
mm9_v1_chr13_+_13529868_13529883	4.29295	NFIX.p2	NM_010917|Nid1|18073|nidogen 1	BC052939|Nid1|18073|nidogen 1
mm9_v1_chr6_+_34426352_34426399	4.28156	NFIX.p2	AK037239|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK078119|Bpgm|12183|2,3-bisphosphoglycerate mutase	NM_007563|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK171685|Bpgm|12183|2,3-bisphosphoglycerate mutase	AK211952|Bpgm|12183|2,3-bisphosphoglycerate mutase
mm9_v1_chr2_+_156301651_156301691	4.16507	NFIX.p2	AK122251|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1
mm9_v1_chr15_-_93426312_93426402	4.06844	NFIX.p2	AK153711|Prickle1|106042|prickle homolog 1 (Drosophila)	NM_001033217|Prickle1|106042|prickle homolog 1 (Drosophila)
mm9_v1_chr1_-_174136874_174136913	4.05775	NFIX.p2	NM_011063|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr12_-_71448600_71448600	4.05769	NFIX.p2	BC052034|Trim9|94090|tripartite motif-containing 9	NM_001110202|Trim9|94090|tripartite motif-containing 9	NM_001110203|Trim9|94090|tripartite motif-containing 9	NM_053167|Trim9|94090|tripartite motif-containing 9
mm9_v1_chr13_+_13529902_13529906	3.97067	NFIX.p2	AK144878|Nid1|18073|nidogen 1
mm9_v1_chr5_-_92471976_92472071	3.96355	NFIX.p2	BC117894|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	BC117895|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029066|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_177270|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029065|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	NM_016912|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK144574|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm9_v1_chr9_+_107838164_107838328	3.8902	NFIX.p2	AK085143|Camkv|235604|CaM kinase-like vesicle-associated	NM_145621|Camkv|235604|CaM kinase-like vesicle-associated	BC017634|Camkv|235604|CaM kinase-like vesicle-associated	BC111033|Camkv|235604|CaM kinase-like vesicle-associated	AK147323|Camkv|235604|CaM kinase-like vesicle-associated	BC022169|Camkv|235604|CaM kinase-like vesicle-associated	BC086762|Camkv|235604|CaM kinase-like vesicle-associated
mm9_v1_chr13_+_13529923_13529930	3.80812	NFIX.p2	AK084876|Nid1|18073|nidogen 1
mm9_v1_chr19_+_21852816_21852904	3.7807	NFIX.p2	NM_001033759|Tmem2|83921|transmembrane protein 2	NM_031997|Tmem2|83921|transmembrane protein 2	AK172599|Tmem2|83921|transmembrane protein 2	BC089353|Tmem2|83921|transmembrane protein 2	AK149667|Tmem2|83921|transmembrane protein 2	AK172691|Tmem2|83921|transmembrane protein 2	AK149803|Tmem2|83921|transmembrane protein 2	AK156343|Tmem2|83921|transmembrane protein 2
mm9_v1_chr2_+_106533615_106533705	3.76735	NFIX.p2	AK161666|Mpped2|77015|metallophosphoesterase domain containing 2	NM_001143683|Mpped2|77015|metallophosphoesterase domain containing 2	BC020182|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr10_+_81022283_81022301	3.75637	NFIX.p2	X73361|Aes|14797|amino-terminal enhancer of split	BC132217|Aes|14797|amino-terminal enhancer of split	BC132219|Aes|14797|amino-terminal enhancer of split	BC145299|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr11_+_3414983_3415036	3.74925	NFIX.p2	BC019742|Selm|114679|selenoprotein M
mm9_v1_chr11_+_3414792_3414875	3.74641	NFIX.p2	BC147333|Selm|114679|selenoprotein M	BC147332|Selm|114679|selenoprotein M	AK018791|Selm|114679|selenoprotein M
mm9_v1_chr16_-_22439642_22439745	3.74513	NFIX.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr14_+_8835385_8835479	3.67976	NFIX.p2	NM_025341|Abhd6|66082|abhydrolase domain containing 6	AK090076|Abhd6|66082|abhydrolase domain containing 6	BC027011|Abhd6|66082|abhydrolase domain containing 6	AK168782|Abhd6|66082|abhydrolase domain containing 6	AK002883|Abhd6|66082|abhydrolase domain containing 6	AK011887|Abhd6|66082|abhydrolase domain containing 6	AK076105|Abhd6|66082|abhydrolase domain containing 6
mm9_v1_chr3_+_88425073_88425232	3.67747	NFIX.p2	BC006589|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AB093254|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr4_-_24778203_24778245	3.62514	NFIX.p2	AK134944|Klhl32|212390|kelch-like 32 (Drosophila)	NM_001033531|Klhl32|212390|kelch-like 32 (Drosophila)	NM_001163020|Klhl32|212390|kelch-like 32 (Drosophila)
mm9_v1_chr10_+_77441365_77441428	3.58587	NFIX.p2	AK003097|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK004032|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	NM_026431|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC016605|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK075794|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC029982|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK165293|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK153233|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	BC010330|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene	AK147511|1810043G02Rik|67884|RIKEN cDNA 1810043G02 gene
mm9_v1_chr5_-_134718500_134718616	3.57183	NFIX.p2	AK183312|Gtf2i|14886|general transcription factor II I	AK211276|Gtf2i|14886|general transcription factor II I
mm9_v1_chr3_+_88425352_88425437	3.56419	NFIX.p2	AK167628|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK171223|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr5_+_117807290_117807469	3.54775	NFIX.p2	AK080976|Wsb2|59043|WD repeat and SOCS box-containing 2	BC055100|Wsb2|59043|WD repeat and SOCS box-containing 2	NM_021539|Wsb2|59043|WD repeat and SOCS box-containing 2	AK157999|Wsb2|59043|WD repeat and SOCS box-containing 2	AF072881|Wsb2|59043|WD repeat and SOCS box-containing 2	AF033188|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chr2_+_156301543_156301577	3.53065	NFIX.p2	NM_001006664|Epb4.1l1|13821|erythrocyte protein band 4.1-like 1
mm9_v1_chr3_+_88425294_88425344	3.48805	NFIX.p2	NM_001198912|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	NM_001198913|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr7_-_31836457_31836500	3.45893	NFIX.p2	NM_022007|Fxyd7|57780|FXYD domain-containing ion transport regulator 7	AK004113|Fxyd7|57780|FXYD domain-containing ion transport regulator 7	BC048737|Fxyd7|57780|FXYD domain-containing ion transport regulator 7	BC061101|Fxyd7|57780|FXYD domain-containing ion transport regulator 7
mm9_v1_chr4_-_115320309_115320329	3.44793	NFIX.p2	D50834|Cyp4b1|13120|cytochrome P450, family 4, subfamily b, polypeptide 1	NM_007823|Cyp4b1|13120|cytochrome P450, family 4, subfamily b, polypeptide 1	BC008996|Cyp4b1|13120|cytochrome P450, family 4, subfamily b, polypeptide 1	AK143890|Cyp4b1|13120|cytochrome P450, family 4, subfamily b, polypeptide 1	AK165445|Cyp4b1|13120|cytochrome P450, family 4, subfamily b, polypeptide 1
mm9_v1_chr3_+_88425011_88425071	3.4085	NFIX.p2	NM_008487|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AK156379|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	AF177032|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2	U28495|Arhgef2|16800|rho/rac guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr15_-_32174172_32174174	3.33654	NFIX.p2	AK007520|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr10_+_110357230_110357257	3.33271	NFIX.p2	AF037208|Csrp2|13008|cysteine and glycine-rich protein 2	AK010626|Csrp2|13008|cysteine and glycine-rich protein 2	NM_007792|Csrp2|13008|cysteine and glycine-rich protein 2	AK003328|Csrp2|13008|cysteine and glycine-rich protein 2	AK012647|Csrp2|13008|cysteine and glycine-rich protein 2	BC012663|Csrp2|13008|cysteine and glycine-rich protein 2
mm9_v1_chr7_-_97605681_97605720	3.25287	NFIX.p2	BC023171|Tmem126a|66271|transmembrane protein 126A	AK005343|Tmem126a|66271|transmembrane protein 126A	AK050267|Tmem126a|66271|transmembrane protein 126A	AK007559|Tmem126a|66271|transmembrane protein 126A	NM_025460|Tmem126a|66271|transmembrane protein 126A
mm9_v1_chrX_+_132804834_132804853	3.24812	NFIX.p2	AK003294|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr4_-_45543623_45543714	3.24508	NFIX.p2	NM_001033306|Shb|230126|src homology 2 domain-containing transforming protein B
mm9_v1_chr10_+_81022304_81022369	3.2356	NFIX.p2	AK158714|Aes|14797|amino-terminal enhancer of split	NM_010347|Aes|14797|amino-terminal enhancer of split	L12140|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr11_+_3414686_3414704	3.21683	NFIX.p2	AK079576|Selm|114679|selenoprotein M	NM_053267|Selm|114679|selenoprotein M
mm9_v1_chr10_+_81022229_81022246	3.19226	NFIX.p2	AK131845|Aes|14797|amino-terminal enhancer of split	AK131994|Aes|14797|amino-terminal enhancer of split
mm9_v1_chr11_+_104092793_104092806	3.11451	NFIX.p2	AK147636|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr11_+_45869506_45869586	3.08503	NFIX.p2	D50410|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	AK147217|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	AF019887|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC115767|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr6_+_54631644_54631765	2.95386	NFIX.p2	BC042507|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	BC052467|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019120|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK019128|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	AK043452|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene	NM_026629|2410066E13Rik|68235|RIKEN cDNA 2410066E13 gene
mm9_v1_chr14_-_21871345_21871395	2.90578	NFIX.p2	BC024595|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr1_-_79855209_79855213	2.88187	NFIX.p2	AK045954|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK047856|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK051332|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK159687|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK160700|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK164270|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	X70296|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2
mm9_v1_chr16_-_10314010_10314073	2.85467	NFIX.p2	AK076194|Emp2|13731|epithelial membrane protein 2	AK077260|Emp2|13731|epithelial membrane protein 2	NM_007929|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr11_+_3414884_3414917	2.81699	NFIX.p2	AK079358|Selm|114679|selenoprotein M	AY043488|Selm|114679|selenoprotein M	AK046034|Selm|114679|selenoprotein M	AK035312|Selm|114679|selenoprotein M	AK086243|Selm|114679|selenoprotein M
mm9_v1_chr2_+_32502186_32502217	2.79254	NFIX.p2	BC029080|Eng|13805|endoglin	S69407|Eng|13805|endoglin
mm9_v1_chr8_-_41596638_41596711	2.78437	NFIX.p2	AK044535|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	NM_011135|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr6_-_125444722_125444810	2.76351	NFIX.p2	AK151619|Cd9|12527|CD9 antigen	AK170310|Cd9|12527|CD9 antigen	AK151443|Cd9|12527|CD9 antigen	BC070474|Cd9|12527|CD9 antigen	NM_007657|Cd9|12527|CD9 antigen	AK002251|Cd9|12527|CD9 antigen	AK012793|Cd9|12527|CD9 antigen
mm9_v1_chr7_+_80885175_80885216	2.70877	NFIX.p2	NM_001162532|Fam174b|100038347|family with sequence similarity 174, member B
mm9_v1_chr18_+_37911236_37911432	2.69637	NFIX.p2	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr6_+_48791616_48791654	2.68234	NFIX.p2	NM_001098271|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr6_-_125444695_125444710	2.66568	NFIX.p2	L08115|Cd9|12527|CD9 antigen
mm9_v1_chr15_-_101616888_101616888	2.64088	NFIX.p2	NM_213728|Krt72-ps|105866|keratin 72, pseudogene
mm9_v1_chr11_-_116007231_116007289	2.61014	NFIX.p2	AK004058|Fbf1|217335|Fas (TNFRSF6) binding factor 1
mm9_v1_chr6_+_117791285_117791301	2.59137	NFIX.p2	AK146789|Zfp637|232337|zinc finger protein 637
mm9_v1_chr8_+_97197870_97198051	2.55781	NFIX.p2	AK185594|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK195499|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK205549|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK207967|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK212239|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK214075|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK216087|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK218146|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK220110|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK206178|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK190102|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK205025|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK005851|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr1_-_175297624_175297771	2.53641	NFIX.p2	AY059393|Cadm3|94332|cell adhesion molecule 3	BC115417|Cadm3|94332|cell adhesion molecule 3	BC115418|Cadm3|94332|cell adhesion molecule 3	BC079837|Cadm3|94332|cell adhesion molecule 3	AF195662|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr8_-_34752419_34752455	2.50503	NFIX.p2	D88447|Ubxn8|108159|UBX domain protein 8	AK011496|Ubxn8|108159|UBX domain protein 8	AK132565|Ubxn8|108159|UBX domain protein 8	NM_178648|Ubxn8|108159|UBX domain protein 8
mm9_v1_chr1_-_173080710_173080755	2.49537	NFIX.p2	BC083091|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	BC005779|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK002459|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK135503|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK012818|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	AK032458|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein	NM_025321|Sdhc|66052|succinate dehydrogenase complex, subunit C, integral membrane protein
mm9_v1_chr8_+_87162885_87162891	2.49216	NFIX.p2	AK132071|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr5_-_114250360_114250424	2.48647	NFIX.p2	BC025600|Tmem119|231633|transmembrane protein 119	NM_146162|Tmem119|231633|transmembrane protein 119	AK078473|Tmem119|231633|transmembrane protein 119	AK170712|Tmem119|231633|transmembrane protein 119	AK135223|Tmem119|231633|transmembrane protein 119
mm9_v1_chr1_-_175297778_175297829	2.4418	NFIX.p2	AK036352|Cadm3|94332|cell adhesion molecule 3	AK053077|Cadm3|94332|cell adhesion molecule 3	AK038917|Cadm3|94332|cell adhesion molecule 3	NM_053199|Cadm3|94332|cell adhesion molecule 3
mm9_v1_chr12_+_70994091_70994091	2.42982	NFIX.p2	NM_178628|Atl1|73991|atlastin GTPase 1
mm9_v1_chr6_-_92517359_92517359	2.40653	NFIX.p2	BC050793|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134461|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr19_-_58529766_58529841	2.40429	NFIX.p2	BC044783|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AK076171|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr18_+_37901716_37901894	2.39722	NFIX.p2	BC054556|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	NM_033578|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	AY013808|Pcdhgb6|93703|protocadherin gamma subfamily B, 6
mm9_v1_chr18_+_38115192_38115292	2.39492	NFIX.p2	NM_153793|Rell2|225392|RELT-like 2	AK044097|Rell2|225392|RELT-like 2	BC038500|Rell2|225392|RELT-like 2
mm9_v1_chrX_-_132749976_132750051	2.38909	NFIX.p2	AF051347|Bex1|19716|brain expressed gene 1	AF097438|Bex1|19716|brain expressed gene 1	BC061179|Bex1|19716|brain expressed gene 1	BC089464|Bex1|19716|brain expressed gene 1	NM_009052|Bex1|19716|brain expressed gene 1
mm9_v1_chr16_-_85173764_85173823	2.37936	NFIX.p2	AK218334|App|11820|amyloid beta (A4) precursor protein	AY267348|App|11820|amyloid beta (A4) precursor protein	AK148439|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr1_-_79855229_79855247	2.34445	NFIX.p2	NM_009255|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2
mm9_v1_chr7_-_148008029_148008088	2.33413	NFIX.p2	BC068250|Zfp941|407812|zinc finger protein 941	BC066028|Zfp941|407812|zinc finger protein 941	AK045889|Zfp941|407812|zinc finger protein 941	AK141045|Zfp941|407812|zinc finger protein 941	NM_001001180|Zfp941|407812|zinc finger protein 941
mm9_v1_chr17_-_14831058_14831092	2.33008	NFIX.p2	BC053702|Thbs2|21826|thrombospondin 2
mm9_v1_chr9_+_56266415_56266485	2.31267	NFIX.p2	AK017716|Hmg20a|66867|high mobility group 20A	AK129010|Hmg20a|66867|high mobility group 20A	AK134213|Hmg20a|66867|high mobility group 20A
mm9_v1_chr1_+_66221851_66221903	2.30695	NFIX.p2	AK166380|Mtap2|17756|microtubule-associated protein 2	BC052446|Mtap2|17756|microtubule-associated protein 2	NM_001039934|Mtap2|17756|microtubule-associated protein 2	NM_008632|Mtap2|17756|microtubule-associated protein 2	BC150945|Mtap2|17756|microtubule-associated protein 2
mm9_v1_chr5_-_4104331_4104507	2.2331	NFIX.p2	AK028355|Cyp51|13121|cytochrome P450, family 51	BC031813|Cyp51|13121|cytochrome P450, family 51	AK031059|Cyp51|13121|cytochrome P450, family 51	AK075764|Cyp51|13121|cytochrome P450, family 51	AK076983|Cyp51|13121|cytochrome P450, family 51	AF166266|Cyp51|13121|cytochrome P450, family 51	AK028815|Cyp51|13121|cytochrome P450, family 51
mm9_v1_chr11_+_104092749_104092776	2.22594	NFIX.p2	M18775|Mapt|17762|microtubule-associated protein tau	M18776|Mapt|17762|microtubule-associated protein tau	NM_001038609|Mapt|17762|microtubule-associated protein tau	NM_010838|Mapt|17762|microtubule-associated protein tau	AK078167|Mapt|17762|microtubule-associated protein tau
mm9_v1_chr2_+_70400179_70400352	2.22478	NFIX.p2	AK054554|Gad1|14415|glutamic acid decarboxylase 1	NM_008077|Gad1|14415|glutamic acid decarboxylase 1	AK148497|Gad1|14415|glutamic acid decarboxylase 1	AK160868|Gad1|14415|glutamic acid decarboxylase 1	AK136801|Gad1|14415|glutamic acid decarboxylase 1	BC027059|Gad1|14415|glutamic acid decarboxylase 1	AF326547|Gad1|14415|glutamic acid decarboxylase 1	AF326548|Gad1|14415|glutamic acid decarboxylase 1	Z49976|Gad1|14415|glutamic acid decarboxylase 1
mm9_v1_chr1_+_59821480_59821480	2.20077	NFIX.p2	NM_007561|Bmpr2|12168|bone morphogenic protein receptor, type II (serine/threonine kinase)	U78048|Bmpr2|12168|bone morphogenic protein receptor, type II (serine/threonine kinase)
mm9_v1_chr6_-_124807704_124807729	2.18988	NFIX.p2	AJ441086|Leprel2|14789|leprecan-like 2	AY463530|Leprel2|14789|leprecan-like 2	NM_013534|Leprel2|14789|leprecan-like 2
mm9_v1_chr16_-_10313963_10313988	2.1739	NFIX.p2	AK161166|Emp2|13731|epithelial membrane protein 2	BC041670|Emp2|13731|epithelial membrane protein 2	AF346627|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr10_-_105011265_105011266	2.16931	NFIX.p2	BC138362|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	BC138363|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chr13_-_69138229_69138235	2.16017	NFIX.p2	AK122432|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr10_+_75398588_75398659	2.15442	NFIX.p2	BC061190|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10	AK131581|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10	AK075746|Chchd10|103172|coiled-coil-helix-coiled-coil-helix domain containing 10
mm9_v1_chr3_-_57379831_57379833	2.14717	NFIX.p2	AK142299|Wwtr1|97064|WW domain containing transcription regulator 1	NM_001168281|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chr15_-_76881097_76881097	2.14174	NFIX.p2	BC025172|Mb|17189|myoglobin	NM_013593|Mb|17189|myoglobin
mm9_v1_chr3_-_152003317_152003373	2.13058	NFIX.p2	BC138328|Fam73a|215708|family with sequence similarity 73, member A	BC138329|Fam73a|215708|family with sequence similarity 73, member A	AK166051|Fam73a|215708|family with sequence similarity 73, member A	BC059928|Fam73a|215708|family with sequence similarity 73, member A	AK044739|Fam73a|215708|family with sequence similarity 73, member A	BC098205|Fam73a|215708|family with sequence similarity 73, member A	AK045347|Fam73a|215708|family with sequence similarity 73, member A	AK143366|Fam73a|215708|family with sequence similarity 73, member A	AK085017|Fam73a|215708|family with sequence similarity 73, member A	NM_001162375|Fam73a|215708|family with sequence similarity 73, member A	NM_174868|Fam73a|215708|family with sequence similarity 73, member A
mm9_v1_chrX_+_132804791_132804829	2.1179	NFIX.p2	NM_001110233|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_001110234|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	NM_009750|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr13_-_34437042_34437162	2.1167	NFIX.p2	AK147397|Slc22a23|73102|solute carrier family 22, member 23	NM_001033167|Slc22a23|73102|solute carrier family 22, member 23
mm9_v1_chr3_+_108394195_108394337	2.08521	NFIX.p2	NM_181400|Wdr47|99512|WD repeat domain 47	AK047357|Wdr47|99512|WD repeat domain 47	AK163422|Wdr47|99512|WD repeat domain 47	BC040337|Wdr47|99512|WD repeat domain 47
mm9_v1_chr1_-_94370312_94370408	2.07166	NFIX.p2	BC003439|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10	NM_024197|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10	AK005339|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10	AK013675|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10	AK145979|Ndufa10|67273|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
mm9_v1_chr10_+_79174337_79174350	2.06853	NFIX.p2	AK210944|Bsg|12215|basigin
mm9_v1_chr3_-_57379600_57379797	2.06147	NFIX.p2	AK213529|Wwtr1|97064|WW domain containing transcription regulator 1	BC004640|Wwtr1|97064|WW domain containing transcription regulator 1	AK142720|Wwtr1|97064|WW domain containing transcription regulator 1	AK009983|Wwtr1|97064|WW domain containing transcription regulator 1	AJ299430|Wwtr1|97064|WW domain containing transcription regulator 1	BC014727|Wwtr1|97064|WW domain containing transcription regulator 1	AK011504|Wwtr1|97064|WW domain containing transcription regulator 1	NM_133784|Wwtr1|97064|WW domain containing transcription regulator 1
mm9_v1_chr18_+_37890662_37890807	2.03506	NFIX.p2	BC057403|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AK156301|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	AY013807|Pcdhgb5|93702|protocadherin gamma subfamily B, 5	NM_033577|Pcdhgb5|93702|protocadherin gamma subfamily B, 5
mm9_v1_chr12_+_76409299_76409440	2.02662	NFIX.p2	AK166409|Rhoj|80837|ras homolog gene family, member J	AK166480|Rhoj|80837|ras homolog gene family, member J	NM_023275|Rhoj|80837|ras homolog gene family, member J	BC054464|Rhoj|80837|ras homolog gene family, member J	BC043719|Rhoj|80837|ras homolog gene family, member J	AK159385|Rhoj|80837|ras homolog gene family, member J	AB060651|Rhoj|80837|ras homolog gene family, member J	AK042583|Rhoj|80837|ras homolog gene family, member J	AK003482|Rhoj|80837|ras homolog gene family, member J	AK003490|Rhoj|80837|ras homolog gene family, member J	AK156619|Rhoj|80837|ras homolog gene family, member J	AK171636|Rhoj|80837|ras homolog gene family, member J	AK157518|Rhoj|80837|ras homolog gene family, member J	BC024626|Rhoj|80837|ras homolog gene family, member J	BC060193|Rhoj|80837|ras homolog gene family, member J	AK185821|Rhoj|80837|ras homolog gene family, member J	AF309564|Rhoj|80837|ras homolog gene family, member J
mm9_v1_chr7_+_150659625_150659701	2.01454	NFIX.p2	AJ404609|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	NM_008767|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	BC015078|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	AF037065|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18	AF028739|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18
mm9_v1_chr1_+_168184269_168184413	2.00735	NFIX.p2	NM_001164528|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024494|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024495|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024496|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024497|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024498|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024499|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024500|Ildr2|100039795|immunoglobulin-like domain containing receptor 2	FJ024501|Ildr2|100039795|immunoglobulin-like domain containing receptor 2
mm9_v1_chr5_-_143026961_143027030	1.97126	NFIX.p2	AK052964|Radil|231858|Ras association and DIL domains	AK038570|Radil|231858|Ras association and DIL domains	AK163852|Radil|231858|Ras association and DIL domains	AK154169|Radil|231858|Ras association and DIL domains	BC056483|Radil|231858|Ras association and DIL domains	AK173277|Radil|231858|Ras association and DIL domains	AK162917|Radil|231858|Ras association and DIL domains	NM_178702|Radil|231858|Ras association and DIL domains
mm9_v1_chr15_+_58247016_58247063	1.96489	NFIX.p2	AK137324|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	NM_145959|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	BC070426|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr10_-_105011439_105011534	1.95946	NFIX.p2	BC092226|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK052344|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	AK135552|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2	NM_177368|Tmtc2|278279|transmembrane and tetratricopeptide repeat containing 2
mm9_v1_chrX_-_147531030_147531085	1.95755	NFIX.p2	BC037444|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC025008|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	AK044504|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	BC049668|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_001164578|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)	NM_175146|Tsr2|69499|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
mm9_v1_chr8_-_93659394_93659394	1.95037	NFIX.p2	NM_010241|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein
mm9_v1_chr5_-_114541313_114541402	1.94698	NFIX.p2	BC059878|Svop|68666|SV2 related protein	AK047655|Svop|68666|SV2 related protein	AK053833|Svop|68666|SV2 related protein	AK160770|Svop|68666|SV2 related protein	AK047764|Svop|68666|SV2 related protein	AK082744|Svop|68666|SV2 related protein	NM_026805|Svop|68666|SV2 related protein
mm9_v1_chr8_-_28239121_28239185	1.93448	NFIX.p2	AK152842|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like
mm9_v1_chr9_+_122714664_122714720	1.92869	NFIX.p2	NM_001013405|D9Ertd402e|382117|DNA segment, Chr 9, ERATO Doi 402, expressed	BC080690|D9Ertd402e|382117|DNA segment, Chr 9, ERATO Doi 402, expressed
mm9_v1_chr7_-_31230577_31230646	1.90994	NFIX.p2	BC021877|Aplp1|11803|amyloid beta (A4) precursor-like protein 1	NM_007467|Aplp1|11803|amyloid beta (A4) precursor-like protein 1
mm9_v1_chr5_+_118426774_118426787	1.9014	NFIX.p2	AK049723|Fbxo21|231670|F-box protein 21	NM_145564|Fbxo21|231670|F-box protein 21	AK076521|Fbxo21|231670|F-box protein 21
mm9_v1_chr12_-_80273320_80273473	1.88904	NFIX.p2	AF035821|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AF035208|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC009810|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC080204|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	BC002290|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK160624|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	AK002289|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog	NM_016800|Vti1b|53612|vesicle transport through interaction with t-SNAREs 1B homolog
mm9_v1_chr16_-_30550622_30550663	1.88491	NFIX.p2	AK031524|Tmem44|224090|transmembrane protein 44	AK045675|Tmem44|224090|transmembrane protein 44	AK048655|Tmem44|224090|transmembrane protein 44	NM_172614|Tmem44|224090|transmembrane protein 44
mm9_v1_chr13_-_69138164_69138176	1.82986	NFIX.p2	BC037107|Adcy2|210044|adenylate cyclase 2
mm9_v1_chr19_-_10630215_10630267	1.829	NFIX.p2	BC052053|Tmem216|68642|transmembrane protein 216	AK080725|Tmem216|68642|transmembrane protein 216	AK013286|Tmem216|68642|transmembrane protein 216
mm9_v1_chr11_-_20731016_20731238	1.8262	NFIX.p2	AK041053|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK167557|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	BC019131|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	NM_173752|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene	AK156350|1110067D22Rik|216551|RIKEN cDNA 1110067D22 gene
mm9_v1_chr2_-_151458299_151458319	1.80398	NFIX.p2	AK047595|Snph|241727|syntaphilin	AK138230|Snph|241727|syntaphilin	AK047568|Snph|241727|syntaphilin
mm9_v1_chr1_+_74589461_74589571	1.78345	NFIX.p2	NM_001081456|Plcd4|18802|phospholipase C, delta 4	AK140231|Plcd4|18802|phospholipase C, delta 4	AK039149|Plcd4|18802|phospholipase C, delta 4	BC066156|Plcd4|18802|phospholipase C, delta 4
mm9_v1_chr8_-_28239077_28239111	1.77715	NFIX.p2	BC098232|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	BC021918|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK151198|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK012459|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK012680|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK028228|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK083122|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	NM_025686|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	AK017767|Brf2|66653|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like
mm9_v1_chr13_+_13529947_13529962	1.76999	NFIX.p2	X14480|Nid1|18073|nidogen 1	BC131668|Nid1|18073|nidogen 1	BC131669|Nid1|18073|nidogen 1	X14194|Nid1|18073|nidogen 1
mm9_v1_chr8_-_128093602_128093782	1.76044	NFIX.p2	AK132916|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2	BC072593|Sipa1l2|244668|signal-induced proliferation-associated 1 like 2
mm9_v1_chr7_-_137663020_137663074	1.7521	NFIX.p2	BC050948|Ate1|11907|arginyltransferase 1	NM_001136054|Ate1|11907|arginyltransferase 1	AK167591|Ate1|11907|arginyltransferase 1	BC042601|Ate1|11907|arginyltransferase 1	NM_013799|Ate1|11907|arginyltransferase 1	AK148442|Ate1|11907|arginyltransferase 1
mm9_v1_chr19_+_45635070_45635130	1.73526	NFIX.p2	BC027559|Dpcd|226162|deleted in primary ciliary dyskinesia	AK077347|Dpcd|226162|deleted in primary ciliary dyskinesia	NM_172639|Dpcd|226162|deleted in primary ciliary dyskinesia
mm9_v1_chr5_+_118426721_118426771	1.73311	NFIX.p2	BC021871|Fbxo21|231670|F-box protein 21
mm9_v1_chrX_+_8469478_8469488	1.73085	NFIX.p2	NM_175327|B630019K06Rik|102941|RIKEN cDNA B630019K06 gene
mm9_v1_chr6_+_117791197_117791271	1.6929	NFIX.p2	BC048843|Zfp637|232337|zinc finger protein 637	NM_177684|Zfp637|232337|zinc finger protein 637	BC021601|Zfp637|232337|zinc finger protein 637
mm9_v1_chr8_-_83404377_83404428	1.69173	NFIX.p2	BC007483|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	NM_021356|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	AK155423|Gab1|14388|growth factor receptor bound protein 2-associated protein 1	AK132176|Gab1|14388|growth factor receptor bound protein 2-associated protein 1
mm9_v1_chr18_+_38578583_38578694	1.6792	NFIX.p2	AF220209|Ndfip1|65113|Nedd4 family interacting protein 1	AK050560|Ndfip1|65113|Nedd4 family interacting protein 1	BC026372|Ndfip1|65113|Nedd4 family interacting protein 1	NM_022996|Ndfip1|65113|Nedd4 family interacting protein 1	BC020359|Ndfip1|65113|Nedd4 family interacting protein 1
mm9_v1_chr6_-_7643156_7643286	1.66232	NFIX.p2	AK167933|Asns|27053|asparagine synthetase	AK167524|Asns|27053|asparagine synthetase	BC005552|Asns|27053|asparagine synthetase	NM_012055|Asns|27053|asparagine synthetase	U38940|Asns|27053|asparagine synthetase	AK160459|Asns|27053|asparagine synthetase	AK076207|Asns|27053|asparagine synthetase
mm9_v1_chr11_+_45869473_45869501	1.65909	NFIX.p2	NM_009616|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)	BC093480|Adam19|11492|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm9_v1_chr14_+_121434765_121434823	1.64086	NFIX.p2	AK134958|Farp1|223254|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_134082|Farp1|223254|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm9_v1_chr2_+_126378563_126378890	1.64003	NFIX.p2	AK165446|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	NM_011978|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	AK144069|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	BC013442|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	BC024735|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	BC022170|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	AJ223958|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	AK144070|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	AF033031|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2	AF072757|Slc27a2|26458|solute carrier family 27 (fatty acid transporter), member 2
mm9_v1_chr7_-_147340532_147340650	1.63276	NFIX.p2	BC056484|Sprn|212518|shadow of prion protein	NM_183147|Sprn|212518|shadow of prion protein	AK049995|Sprn|212518|shadow of prion protein
mm9_v1_chr11_+_94871181_94871224	1.61199	NFIX.p2	AK049753|Samd14|217125|sterile alpha motif domain containing 14	NM_146025|Samd14|217125|sterile alpha motif domain containing 14	AK047184|Samd14|217125|sterile alpha motif domain containing 14
mm9_v1_chr13_-_25361773_25361915	1.60453	NFIX.p2	AK138191|Nrsn1|22360|neurensin 1	D83206|Nrsn1|22360|neurensin 1	AK160941|Nrsn1|22360|neurensin 1	NM_009513|Nrsn1|22360|neurensin 1
mm9_v1_chr3_-_8667013_8667038	1.59041	NFIX.p2	AF232241|Hey1|15213|hairy/enhancer-of-split related with YRPW motif 1	AF172286|Hey1|15213|hairy/enhancer-of-split related with YRPW motif 1	BC086635|Hey1|15213|hairy/enhancer-of-split related with YRPW motif 1	AK140212|Hey1|15213|hairy/enhancer-of-split related with YRPW motif 1	NM_010423|Hey1|15213|hairy/enhancer-of-split related with YRPW motif 1	AK011149|Hey1|15213|hairy/enhancer-of-split related with YRPW motif 1
mm9_v1_chr19_+_45101318_45101473	1.58095	NFIX.p2	AK202462|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK203408|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK205448|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK210216|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215584|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK215776|Lzts2|226154|leucine zipper, putative tumor suppressor 2	AK217660|Lzts2|226154|leucine zipper, putative tumor suppressor 2
mm9_v1_chr9_-_121404750_121404785	1.56545	NFIX.p2	BC028487|Cck|12424|cholecystokinin	AK002677|Cck|12424|cholecystokinin
mm9_v1_chr10_-_60609031_60609082	1.56031	NFIX.p2	CT010214|Sgpl1|20397|sphingosine phosphate lyase 1
mm9_v1_chr9_-_53418394_53418489	1.55726	NFIX.p2	AK146241|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK032097|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK075593|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	BC024763|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	BC024429|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AJ510150|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK169771|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK081715|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	NM_144784|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK163402|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1
mm9_v1_chr9_-_29219382_29219527	1.55518	NFIX.p2	AK158752|Ntm|235106|neurotrimin
mm9_v1_chr11_-_88712812_88712825	1.55472	NFIX.p2	U95145|Akap1|11640|A kinase (PRKA) anchor protein 1	U95146|Akap1|11640|A kinase (PRKA) anchor protein 1	NM_009648|Akap1|11640|A kinase (PRKA) anchor protein 1	AK132749|Akap1|11640|A kinase (PRKA) anchor protein 1
mm9_v1_chr1_-_137482259_137482285	1.54683	NFIX.p2	AF307453|Nav1|215690|neuron navigator 1
mm9_v1_chr5_+_118426792_118426794	1.53156	NFIX.p2	AB093270|Fbxo21|231670|F-box protein 21
mm9_v1_chr10_+_110943412_110943638	1.52865	NFIX.p2	AK158890|Phlda1|21664|pleckstrin homology-like domain, family A, member 1	AK148063|Phlda1|21664|pleckstrin homology-like domain, family A, member 1
mm9_v1_chr15_+_79346819_79346984	1.5235	NFIX.p2	NM_134090|Kdelr3|105785|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK136991|Kdelr3|105785|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC011472|Kdelr3|105785|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC024420|Kdelr3|105785|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK208352|Kdelr3|105785|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
mm9_v1_chr13_+_38436987_38437005	1.51534	NFIX.p2	AK041210|Bmp6|12161|bone morphogenetic protein 6
mm9_v1_chr13_-_60278558_60278627	1.51219	NFIX.p2	BC058628|Gas1|14451|growth arrest specific 1
mm9_v1_chr2_+_24909898_24909973	1.50806	NFIX.p2	NM_001039386|Nelf|56876|nasal embryonic LHRH factor	NM_001039387|Nelf|56876|nasal embryonic LHRH factor	NM_001177654|Nelf|56876|nasal embryonic LHRH factor	NM_001177655|Nelf|56876|nasal embryonic LHRH factor	NM_020276|Nelf|56876|nasal embryonic LHRH factor	AK004986|Nelf|56876|nasal embryonic LHRH factor	AK041478|Nelf|56876|nasal embryonic LHRH factor	AK158803|Nelf|56876|nasal embryonic LHRH factor	AF266508|Nelf|56876|nasal embryonic LHRH factor	AK019560|Nelf|56876|nasal embryonic LHRH factor	BC006642|Nelf|56876|nasal embryonic LHRH factor	AK053402|Nelf|56876|nasal embryonic LHRH factor	AK165300|Nelf|56876|nasal embryonic LHRH factor
mm9_v1_chr16_+_21204820_21205008	1.50257	NFIX.p2	AK144414|Ephb3|13845|Eph receptor B3	BC014822|Ephb3|13845|Eph receptor B3	BC053085|Ephb3|13845|Eph receptor B3	NM_010143|Ephb3|13845|Eph receptor B3	Z49086|Ephb3|13845|Eph receptor B3
mm9_v1_chr1_+_91476810_91476856	1.49281	NFIX.p2	AK147521|Agap1|347722|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm9_v1_chr2_+_26244843_26244934	1.48375	NFIX.p2	AK147110|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK004549|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK075965|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK077218|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK167975|Pmpca|66865|peptidase (mitochondrial processing) alpha	NM_173180|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK032081|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK150118|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK161291|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK169325|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK169342|Pmpca|66865|peptidase (mitochondrial processing) alpha	BC010810|Pmpca|66865|peptidase (mitochondrial processing) alpha	AK158990|Pmpca|66865|peptidase (mitochondrial processing) alpha
mm9_v1_chr13_-_48720941_48721032	1.47929	NFIX.p2	BC066081|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	NM_207232|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	AK132781|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	AK038922|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1	AK030415|Ptpdc1|218232|protein tyrosine phosphatase domain containing 1
mm9_v1_chr11_-_118216625_118216642	1.47661	NFIX.p2	AK032818|Timp2|21858|tissue inhibitor of metalloproteinase 2	AK144236|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr13_-_60278447_60278547	1.47582	NFIX.p2	BC055747|Gas1|14451|growth arrest specific 1
mm9_v1_chr9_+_60560923_60560996	1.46948	NFIX.p2	AK017372|Larp6|67557|La ribonucleoprotein domain family, member 6	AK087521|Larp6|67557|La ribonucleoprotein domain family, member 6	NM_026235|Larp6|67557|La ribonucleoprotein domain family, member 6	AK039614|Larp6|67557|La ribonucleoprotein domain family, member 6	AK020966|Larp6|67557|La ribonucleoprotein domain family, member 6	AK042616|Larp6|67557|La ribonucleoprotein domain family, member 6
mm9_v1_chr16_+_31428887_31428913	1.4539	NFIX.p2	AK137955|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	BC096457|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr2_+_106535757_106535757	1.45158	NFIX.p2	AK012553|Mpped2|77015|metallophosphoesterase domain containing 2	NM_029837|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr7_+_64845887_64845914	1.44842	NFIX.p2	AK083107|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	NM_001038701|Gabrb3|14402|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm9_v1_chr7_-_118923483_118923501	1.43622	NFIX.p2	BC024988|Galntl4|233733|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4	NM_173739|Galntl4|233733|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4	AK084671|Galntl4|233733|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4
mm9_v1_chr14_-_78936606_78936676	1.42768	NFIX.p2	NM_001164503|Akap11|219181|A kinase (PRKA) anchor protein 11
mm9_v1_chr2_+_149656518_149656618	1.42461	NFIX.p2	NM_001085521|Tmem90b|433485|transmembrane protein 90B
mm9_v1_chr16_+_32099870_32099906	1.42019	NFIX.p2	AK005324|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene	NM_025892|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene	AK007713|1500031L02Rik|66994|RIKEN cDNA 1500031L02 gene
mm9_v1_chr5_-_74038829_74039027	1.41967	NFIX.p2	BC052349|Sgcb|24051|sarcoglycan, beta (dystrophin-associated glycoprotein)	AK017781|Sgcb|24051|sarcoglycan, beta (dystrophin-associated glycoprotein)	AK169403|Sgcb|24051|sarcoglycan, beta (dystrophin-associated glycoprotein)	NM_011890|Sgcb|24051|sarcoglycan, beta (dystrophin-associated glycoprotein)	AB024921|Sgcb|24051|sarcoglycan, beta (dystrophin-associated glycoprotein)	AK014381|Sgcb|24051|sarcoglycan, beta (dystrophin-associated glycoprotein)	AK132306|Sgcb|24051|sarcoglycan, beta (dystrophin-associated glycoprotein)
mm9_v1_chr13_+_55794441_55794492	1.3943	NFIX.p2	AK088693|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	BC051430|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	NM_181278|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr10_+_42550365_42550378	1.39025	NFIX.p2	AK017703|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr7_+_59134514_59134648	1.3876	NFIX.p2	NM_008087|Gas2|14453|growth arrest specific 2	M21828|Gas2|14453|growth arrest specific 2
mm9_v1_chr10_+_127774845_127774868	1.38168	NFIX.p2	AK166814|Cs|12974|citrate synthase	AK012151|Cs|12974|citrate synthase	AK145643|Cs|12974|citrate synthase	AK167125|Cs|12974|citrate synthase	AK163273|Cs|12974|citrate synthase
mm9_v1_chr17_-_27270820_27270865	1.37359	NFIX.p2	AK013521|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	AK019014|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	NM_026063|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene	BC030629|2900010M23Rik|67267|RIKEN cDNA 2900010M23 gene
mm9_v1_chr13_-_60278859_60278952	1.36926	NFIX.p2	NM_008086|Gas1|14451|growth arrest specific 1
mm9_v1_chr6_-_48791369_48791407	1.36338	NFIX.p2	AK156042|Tmem176b|65963|transmembrane protein 176B	NM_001164207|Tmem176b|65963|transmembrane protein 176B	NM_001164208|Tmem176b|65963|transmembrane protein 176B
mm9_v1_chr15_-_73640331_73640366	1.36324	NFIX.p2	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr2_+_32462471_32462603	1.36115	NFIX.p2	NM_001025310|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	NM_016973|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AK157562|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AK159158|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	BC036985|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	AB035123|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	BC022924|St6galnac6|50935|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm9_v1_chr15_-_75920355_75920542	1.36086	NFIX.p2	BC011468|Nrbp2|223649|nuclear receptor binding protein 2	BC012437|Nrbp2|223649|nuclear receptor binding protein 2	NM_144847|Nrbp2|223649|nuclear receptor binding protein 2
mm9_v1_chr15_+_91503687_91503711	1.35582	NFIX.p2	AY792512|Lrrk2|66725|leucine-rich repeat kinase 2
mm9_v1_chr11_+_4773977_4774007	1.34106	NFIX.p2	AK031804|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	AK013140|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	AK147786|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	AJ001260|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	NM_008698|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	BC010837|Nipsnap1|18082|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm9_v1_chr10_+_25079661_25079716	1.33344	NFIX.p2	AK170275|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK167434|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	BC023768|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2	AK052475|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr15_+_58247107_58247243	1.31558	NFIX.p2	AK122297|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed	DQ228142|D15Ertd621e|210998|DNA segment, Chr 15, ERATO Doi 621, expressed
mm9_v1_chr2_+_155207542_155207579	1.31504	NFIX.p2	AK170132|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr11_-_118216591_118216621	1.31469	NFIX.p2	M82858|Timp2|21858|tissue inhibitor of metalloproteinase 2	X62622|Timp2|21858|tissue inhibitor of metalloproteinase 2	BC049126|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr3_+_40549475_40549540	1.31424	NFIX.p2	BC012712|Hspa4l|18415|heat shock protein 4 like	AK144225|Hspa4l|18415|heat shock protein 4 like	AK032066|Hspa4l|18415|heat shock protein 4 like	BC110662|Hspa4l|18415|heat shock protein 4 like	BC057002|Hspa4l|18415|heat shock protein 4 like	NM_011020|Hspa4l|18415|heat shock protein 4 like	D49482|Hspa4l|18415|heat shock protein 4 like
mm9_v1_chr11_+_31770920_31770944	1.3074	NFIX.p2	AK173229|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4
mm9_v1_chr11_-_23397858_23397918	1.30272	NFIX.p2	BC064012|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	BC055873|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
mm9_v1_chr8_-_126039251_126039279	1.29096	NFIX.p2	AK013173|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm9_v1_chr10_+_79132113_79132186	1.26785	NFIX.p2	BC138515|Gm16517|110012|predicted gene, Gm16517	BC138516|Gm16517|110012|predicted gene, Gm16517	AF303106|Gm16517|110012|predicted gene, Gm16517	NM_148934|Gm16517|110012|predicted gene, Gm16517
mm9_v1_chr5_-_139960370_139960390	1.25934	NFIX.p2	BC058780|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK146082|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK171245|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr19_+_5475020_5475097	1.25473	NFIX.p2	AF104223|Efemp2|58859|epidermal growth factor-containing fibulin-like extracellular matrix protein 2
mm9_v1_chrX_-_148777014_148777028	1.2371	NFIX.p2	NM_029836|Tspyl2|52808|TSPY-like 2
mm9_v1_chr2_+_181415021_181415025	1.23428	NFIX.p2	BC049617|Tcea2|21400|transcription elongation factor A (SII), 2	BC065786|Tcea2|21400|transcription elongation factor A (SII), 2	BC138504|Tcea2|21400|transcription elongation factor A (SII), 2	BC138505|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr15_+_44027680_44027795	1.22887	NFIX.p2	AK134591|Trhr|22045|thyrotropin releasing hormone receptor	NM_013696|Trhr|22045|thyrotropin releasing hormone receptor	M59811|Trhr|22045|thyrotropin releasing hormone receptor	M94384|Trhr|22045|thyrotropin releasing hormone receptor	BC109005|Trhr|22045|thyrotropin releasing hormone receptor	BC109006|Trhr|22045|thyrotropin releasing hormone receptor	BC128269|Trhr|22045|thyrotropin releasing hormone receptor
mm9_v1_chr12_+_88488104_88488148	1.22303	NFIX.p2	AB041613|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr16_-_10313924_10313944	1.2156	NFIX.p2	AF083876|Emp2|13731|epithelial membrane protein 2
mm9_v1_chr2_+_37307751_37307773	1.21376	NFIX.p2	AK044346|Rabgap1|227800|RAB GTPase activating protein 1	NM_001033960|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr15_-_74502981_74503002	1.20818	NFIX.p2	AF162777|Arc|11838|activity regulated cytoskeletal-associated protein	BC023127|Arc|11838|activity regulated cytoskeletal-associated protein	AK170446|Arc|11838|activity regulated cytoskeletal-associated protein	AK157822|Arc|11838|activity regulated cytoskeletal-associated protein	NM_018790|Arc|11838|activity regulated cytoskeletal-associated protein
mm9_v1_chr10_-_58684594_58684594	1.20596	NFIX.p2	AK076569|Sept10|103080|septin 10	NM_001024910|Sept10|103080|septin 10	NM_001024911|Sept10|103080|septin 10
mm9_v1_chr7_+_150659707_150659725	1.1927	NFIX.p2	BC003734|Slc22a18|18400|solute carrier family 22 (organic cation transporter), member 18
mm9_v1_chr7_+_91677480_91677490	1.19135	NFIX.p2	AK137174|Gm2115|100039239|predicted gene 2115
mm9_v1_chr16_+_31428882_31428885	1.18894	NFIX.p2	AK009575|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr10_-_75807976_75808035	1.18875	NFIX.p2	AK052899|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)	NM_001081419|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)	AK050040|Dip2a|64451|DIP2 disco-interacting protein 2 homolog A (Drosophila)
mm9_v1_chr3_+_79395257_79395275	1.18787	NFIX.p2	AK142413|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)
mm9_v1_chr5_-_139960341_139960349	1.18592	NFIX.p2	AF224494|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr3_-_80717517_80717574	1.18474	NFIX.p2	BC027094|Glrb|14658|glycine receptor, beta subunit	BC037605|Glrb|14658|glycine receptor, beta subunit	NM_010298|Glrb|14658|glycine receptor, beta subunit
mm9_v1_chr3_-_97692613_97692634	1.18444	NFIX.p2	BC028274|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	BC141185|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	BC145504|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)	NM_001039376|Pde4dip|83679|phosphodiesterase 4D interacting protein (myomegalin)
mm9_v1_chr5_+_120120870_120121055	1.18009	NFIX.p2	BC096551|Tbx3|21386|T-box 3	AK052453|Tbx3|21386|T-box 3
mm9_v1_chr12_+_86451782_86451862	1.1712	NFIX.p2	AK158877|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	NM_030225|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK019713|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK149664|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK168570|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK171100|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK028513|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK047270|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK054053|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	AK169943|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	BC006702|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	CT010197|Dlst|78920|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
mm9_v1_chr7_+_71646515_71646591	1.16128	NFIX.p2	BC057620|Apba2|11784|amyloid beta (A4) precursor protein-binding, family A, member 2	NM_007461|Apba2|11784|amyloid beta (A4) precursor protein-binding, family A, member 2
mm9_v1_chr16_-_20621287_20621552	1.16081	NFIX.p2	AK013788|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147550|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147736|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC147745|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	BC157896|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2	NM_028420|Camk2n2|73047|calcium/calmodulin-dependent protein kinase II inhibitor 2
mm9_v1_chr13_-_43295201_43295224	1.15962	NFIX.p2	AK036079|Gfod1|328232|glucose-fructose oxidoreductase domain containing 1
mm9_v1_chr15_-_74879242_74879259	1.15583	NFIX.p2	AK088782|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	AK143577|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	BC010764|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	NM_010741|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1
mm9_v1_chr15_-_98398066_98398161	1.15582	NFIX.p2	AF087662|Ccnt1|12455|cyclin T1	AF095640|Ccnt1|12455|cyclin T1	AF109179|Ccnt1|12455|cyclin T1	AF113951|Ccnt1|12455|cyclin T1	BC131685|Ccnt1|12455|cyclin T1	BC131686|Ccnt1|12455|cyclin T1	NM_009833|Ccnt1|12455|cyclin T1	AK083037|Ccnt1|12455|cyclin T1
mm9_v1_chr10_+_25079603_25079644	1.15098	NFIX.p2	AK144088|Epb4.1l2|13822|erythrocyte protein band 4.1-like 2
mm9_v1_chr15_-_57723866_57723934	1.14093	NFIX.p2	AK075631|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr8_+_97197548_97197604	1.1398	NFIX.p2	AK209782|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr15_+_98885599_98885611	1.12477	NFIX.p2	AK149021|Prph|19132|peripherin	NM_001163588|Prph|19132|peripherin	NM_001163589|Prph|19132|peripherin	NM_013639|Prph|19132|peripherin	BC046291|Prph|19132|peripherin
mm9_v1_chr3_-_107320881_107320937	1.12437	NFIX.p2	AK163113|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17	AY155578|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17	NM_172271|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17
mm9_v1_chrX_+_8469507_8469585	1.11614	NFIX.p2	AK046767|B630019K06Rik|102941|RIKEN cDNA B630019K06 gene	BC055780|B630019K06Rik|102941|RIKEN cDNA B630019K06 gene
mm9_v1_chrX_+_132673583_132673679	1.11179	NFIX.p2	AK010400|Bex4|406217|brain expressed gene 4	AY833558|Bex4|406217|brain expressed gene 4	NM_212457|Bex4|406217|brain expressed gene 4	BC090663|Bex4|406217|brain expressed gene 4	BC116226|Bex4|406217|brain expressed gene 4
mm9_v1_chr10_+_127774872_127774973	1.10965	NFIX.p2	BC013554|Cs|12974|citrate synthase	BC029754|Cs|12974|citrate synthase	NM_026444|Cs|12974|citrate synthase	AB056479|Cs|12974|citrate synthase
mm9_v1_chr6_+_53989925_53989975	1.09638	NFIX.p2	AK030336|Chn2|69993|chimerin (chimaerin) 2	NM_001163640|Chn2|69993|chimerin (chimaerin) 2
mm9_v1_chr2_+_181415111_181415136	1.09254	NFIX.p2	AB221557|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr17_-_66300454_66300558	1.08885	NFIX.p2	AF292033|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)	AJ297390|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)	BC004850|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)	AK168547|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)	AK033504|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)	AK168633|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)	AK049646|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)	NM_023053|Twsg1|65960|twisted gastrulation homolog 1 (Drosophila)
mm9_v1_chr2_+_109731003_109731053	1.08859	NFIX.p2	AK135810|Lin7c|22343|lin-7 homolog C (C. elegans)	AK083299|Lin7c|22343|lin-7 homolog C (C. elegans)	AK015399|Lin7c|22343|lin-7 homolog C (C. elegans)	AK078923|Lin7c|22343|lin-7 homolog C (C. elegans)	AK128989|Lin7c|22343|lin-7 homolog C (C. elegans)	BC052471|Lin7c|22343|lin-7 homolog C (C. elegans)	AK133531|Lin7c|22343|lin-7 homolog C (C. elegans)	AF173083|Lin7c|22343|lin-7 homolog C (C. elegans)	AF087695|Lin7c|22343|lin-7 homolog C (C. elegans)	BC046966|Lin7c|22343|lin-7 homolog C (C. elegans)	NM_011699|Lin7c|22343|lin-7 homolog C (C. elegans)	AK161076|Lin7c|22343|lin-7 homolog C (C. elegans)
mm9_v1_chr11_+_72974053_72974072	1.08266	NFIX.p2	AK134662|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5
mm9_v1_chr13_-_100785524_100785589	1.07928	NFIX.p2	BC027640|Mccc2|78038|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	AK146865|Mccc2|78038|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	AK145564|Mccc2|78038|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	AK146844|Mccc2|78038|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	BC141193|Mccc2|78038|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	BC141194|Mccc2|78038|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	AK132265|Mccc2|78038|methylcrotonoyl-Coenzyme A carboxylase 2 (beta)
mm9_v1_chr10_+_80720062_80720086	1.06889	NFIX.p2	X89723|Matk|17179|megakaryocyte-associated tyrosine kinase	BC060086|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr1_+_173080843_173080843	1.06114	NFIX.p2	AK089180|Mpz|17528|myelin protein zero	NM_008623|Mpz|17528|myelin protein zero
mm9_v1_chr7_-_149280946_149280995	1.06084	NFIX.p2	BC052705|Dusp8|18218|dual specificity phosphatase 8
mm9_v1_chr15_+_98956940_98957052	1.05395	NFIX.p2	BC072579|Spats2|72572|spermatogenesis associated, serine-rich 2
mm9_v1_chr10_+_79167102_79167137	1.05342	NFIX.p2	NM_001077184|Bsg|12215|basigin	NM_009768|Bsg|12215|basigin
mm9_v1_chr5_+_118426802_118426818	1.05221	NFIX.p2	AK048131|Fbxo21|231670|F-box protein 21	AK048542|Fbxo21|231670|F-box protein 21
mm9_v1_chr14_-_21871400_21871464	1.04773	NFIX.p2	AK004740|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	BC090983|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr17_+_74154214_74154436	1.04675	NFIX.p2	AK051717|Ehd3|57440|EH-domain containing 3	AF506002|Ehd3|57440|EH-domain containing 3	BC046596|Ehd3|57440|EH-domain containing 3
mm9_v1_chr6_-_59376283_59376287	1.04375	NFIX.p2	AK050148|Gprin3|243385|GPRIN family member 3	NM_183183|Gprin3|243385|GPRIN family member 3	AK173336|Gprin3|243385|GPRIN family member 3
mm9_v1_chr14_-_25065141_25065143	1.04046	NFIX.p2	AK147699|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_001163513|Dlg5|71228|discs, large homolog 5 (Drosophila)	NM_027726|Dlg5|71228|discs, large homolog 5 (Drosophila)
mm9_v1_chr12_+_53604952_53605039	1.03997	NFIX.p2	AK131622|Arhgap5|11855|Rho GTPase activating protein 5	AK041016|Arhgap5|11855|Rho GTPase activating protein 5
mm9_v1_chr17_+_64287320_64287320	1.03579	NFIX.p2	M32054|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2	NM_008000|Fert2|14158|fer (fms/fps related) protein kinase, testis specific 2
mm9_v1_chr6_-_115201866_115201882	1.01934	NFIX.p2	AK079347|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK140367|Timp4|110595|tissue inhibitor of metalloproteinase 4	NM_080639|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr17_-_85190113_85190128	1.01387	NFIX.p2	NM_028233|Lrpprc|72416|leucine-rich PPR-motif containing	AK138527|Lrpprc|72416|leucine-rich PPR-motif containing
mm9_v1_chr11_+_53380870_53380943	1.00917	NFIX.p2	AK161223|Kif3a|16568|kinesin family member 3A	NM_008443|Kif3a|16568|kinesin family member 3A	D12645|Kif3a|16568|kinesin family member 3A	AK161920|Kif3a|16568|kinesin family member 3A	AK169425|Kif3a|16568|kinesin family member 3A	BC052707|Kif3a|16568|kinesin family member 3A	BC044720|Kif3a|16568|kinesin family member 3A	AK147078|Kif3a|16568|kinesin family member 3A	BC023936|Kif3a|16568|kinesin family member 3A
mm9_v1_chr5_-_74464390_74464465	1.00471	NFIX.p2	BC039916|Usp46|69727|ubiquitin specific peptidase 46	NM_177561|Usp46|69727|ubiquitin specific peptidase 46	AK145298|Usp46|69727|ubiquitin specific peptidase 46
mm9_v1_chr19_+_3986565_3986660	0.999652	NFIX.p2	AK143782|Acy3|71670|aspartoacylase (aminoacylase) 3	AF356878|Acy3|71670|aspartoacylase (aminoacylase) 3	AK002247|Acy3|71670|aspartoacylase (aminoacylase) 3	AY169234|Acy3|71670|aspartoacylase (aminoacylase) 3	AF356879|Acy3|71670|aspartoacylase (aminoacylase) 3	BC010795|Acy3|71670|aspartoacylase (aminoacylase) 3	NM_027857|Acy3|71670|aspartoacylase (aminoacylase) 3
mm9_v1_chr7_+_105851755_105851872	0.998098	NFIX.p2	AK013663|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC049103|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_028410|Prkrir|72981|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
mm9_v1_chr2_+_32502107_32502173	0.997778	NFIX.p2	AY679531|Eng|13805|endoglin	NM_001146348|Eng|13805|endoglin	NM_001146350|Eng|13805|endoglin	NM_007932|Eng|13805|endoglin	X77952|Eng|13805|endoglin	AK151302|Eng|13805|endoglin	AK164727|Eng|13805|endoglin
mm9_v1_chrX_-_70905062_70905211	0.992275	NFIX.p2	AK134665|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase	AF181984|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase	NM_012040|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm9_v1_chr9_-_95650735_95650795	0.991774	NFIX.p2	BC137581|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1	BC144726|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1	NM_011643|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1	U73625|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1	U95167|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1	U95168|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1	U95169|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1	AK038676|Trpc1|22063|transient receptor potential cation channel, subfamily C, member 1
mm9_v1_chr8_-_73132125_73132308	0.991197	NFIX.p2	BC002150|Ssbp4|76900|single stranded DNA binding protein 4	AK157387|Ssbp4|76900|single stranded DNA binding protein 4	AK154336|Ssbp4|76900|single stranded DNA binding protein 4	NM_133772|Ssbp4|76900|single stranded DNA binding protein 4
mm9_v1_chrX_+_132804857_132804862	0.991124	NFIX.p2	AK208231|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	AK004531|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr12_-_29435113_29435270	0.990338	NFIX.p2	AK178189|Ttc15|217449|tetratricopeptide repeat domain 15	AK031763|Ttc15|217449|tetratricopeptide repeat domain 15	AK086217|Ttc15|217449|tetratricopeptide repeat domain 15	BC024077|Ttc15|217449|tetratricopeptide repeat domain 15	BC030887|Ttc15|217449|tetratricopeptide repeat domain 15	AK147985|Ttc15|217449|tetratricopeptide repeat domain 15	NM_001161410|Ttc15|217449|tetratricopeptide repeat domain 15	AK132166|Ttc15|217449|tetratricopeptide repeat domain 15
mm9_v1_chr7_-_31912022_31912061	0.978775	NFIX.p2	BC039140|Scn1b|20266|sodium channel, voltage-gated, type I, beta
mm9_v1_chr2_+_163646545_163646658	0.976549	NFIX.p2	NM_016873|Wisp2|22403|WNT1 inducible signaling pathway protein 2	AF100778|Wisp2|22403|WNT1 inducible signaling pathway protein 2	AF126063|Wisp2|22403|WNT1 inducible signaling pathway protein 2	BC032877|Wisp2|22403|WNT1 inducible signaling pathway protein 2
mm9_v1_chr5_-_42235518_42235530	0.976425	NFIX.p2	AK046296|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK053690|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK134590|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr4_+_101169252_101169283	0.97229	NFIX.p2	NM_198412|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	BC064460|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr7_+_53152702_53152727	0.967271	NFIX.p2	AK039173|Tmem143|70209|transmembrane protein 143
mm9_v1_chr17_-_14831233_14831243	0.966331	NFIX.p2	AK142552|Thbs2|21826|thrombospondin 2
mm9_v1_chr8_+_97296093_97296104	0.964443	NFIX.p2	AB030188|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK078285|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138214|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138472|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK138574|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK154646|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr2_+_163245523_163245600	0.962602	NFIX.p2	AK013849|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene	AK020931|2900093K20Rik|68037|RIKEN cDNA 2900093K20 gene
mm9_v1_chr1_+_196446006_196446022	0.958497	NFIX.p2	NM_008882|Plxna2|18845|plexin A2
mm9_v1_chr3_+_96404978_96405056	0.957921	NFIX.p2	AK143438|Lix1l|280411|Lix1-like	NM_001163170|Lix1l|280411|Lix1-like
mm9_v1_chr11_+_75300330_75300364	0.957718	NFIX.p2	BC093481|Prpf8|192159|pre-mRNA processing factor 8	AK144232|Prpf8|192159|pre-mRNA processing factor 8
mm9_v1_chr12_-_70993825_70993856	0.954848	NFIX.p2	AK084891|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr17_-_29484429_29484756	0.952348	NFIX.p2	AK193036|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	AK217430|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	BC023135|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	BC027274|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	AK154010|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)	AK009623|Mtch1|56462|mitochondrial carrier homolog 1 (C. elegans)
mm9_v1_chr3_+_96405063_96405082	0.944443	NFIX.p2	AK051276|Lix1l|280411|Lix1-like
mm9_v1_chr16_+_18392675_18392746	0.93501	NFIX.p2	AK053865|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	BC051655|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	BC026727|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	AK051627|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	AK044982|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	AF286214|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome	AF286215|Arvcf|11877|armadillo repeat gene deleted in velo-cardio-facial syndrome
mm9_v1_chr16_+_13986691_13986753	0.933627	NFIX.p2	AK049997|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK076136|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK139470|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK136859|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	NM_144518|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK019307|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	BC022741|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene	AK035868|2900011O08Rik|67254|RIKEN cDNA 2900011O08 gene
mm9_v1_chr7_+_72789752_72789811	0.932804	NFIX.p2	AK044290|Tarsl2|272396|threonyl-tRNA synthetase-like 2	NM_172310|Tarsl2|272396|threonyl-tRNA synthetase-like 2	AK041280|Tarsl2|272396|threonyl-tRNA synthetase-like 2	BC039225|Tarsl2|272396|threonyl-tRNA synthetase-like 2	AK079416|Tarsl2|272396|threonyl-tRNA synthetase-like 2	AK040927|Tarsl2|272396|threonyl-tRNA synthetase-like 2
mm9_v1_chr11_+_30785357_30785392	0.931356	NFIX.p2	AK141614|Gpr75|237716|G protein-coupled receptor 75
mm9_v1_chr8_-_126039287_126039398	0.930235	NFIX.p2	BC046622|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	AK028187|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	AK163434|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001170975|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001170976|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_028146|Dbndd1|72185|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm9_v1_chr17_-_24336901_24336901	0.92885	NFIX.p2	AK049306|Tbc1d24|224617|TBC1 domain family, member 24	AK161054|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163852|Tbc1d24|224617|TBC1 domain family, member 24	NM_001163853|Tbc1d24|224617|TBC1 domain family, member 24
mm9_v1_chr1_-_163181313_163181346	0.928677	NFIX.p2	AK157820|Prdx6|11758|peroxiredoxin 6	Y12883|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr7_+_135667095_135667183	0.926134	NFIX.p2	NM_013863|Bag3|29810|BCL2-associated athanogene 3	AB041583|Bag3|29810|BCL2-associated athanogene 3	AK171734|Bag3|29810|BCL2-associated athanogene 3	BC145765|Bag3|29810|BCL2-associated athanogene 3
mm9_v1_chr16_+_21423263_21423279	0.924803	NFIX.p2	AK141678|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	AK149336|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	BC055323|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)
mm9_v1_chr12_+_109572514_109572610	0.922776	NFIX.p2	BC018307|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1	AK140740|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1	AF094479|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1	NM_010010|Cyp46a1|13116|cytochrome P450, family 46, subfamily a, polypeptide 1
mm9_v1_chr9_+_65524331_65524426	0.920451	NFIX.p2	AK169243|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	NM_010952|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK143231|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK146074|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK160444|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168853|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168662|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC055442|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC083114|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AF057298|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC005477|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC110690|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene
mm9_v1_chr19_+_32670279_32670283	0.914405	NFIX.p2	AK137675|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr3_-_117063317_117063389	0.911249	NFIX.p2	BC082323|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137701|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	BC137702|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK129149|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr7_+_148748102_148748107	0.9104	NFIX.p2	X14972|Ap2a2|11772|adaptor protein complex AP-2, alpha 2 subunit
mm9_v1_chr13_-_60278723_60278734	0.90952	NFIX.p2	X65128|Gas1|14451|growth arrest specific 1
mm9_v1_chr2_-_32279522_32279542	0.897015	NFIX.p2	BC022114|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	BC019978|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr7_+_147020072_147020194	0.895164	NFIX.p2	NM_177469|Gpr123|52389|G protein-coupled receptor 123	AK082207|Gpr123|52389|G protein-coupled receptor 123
mm9_v1_chr3_-_117063793_117063793	0.894477	NFIX.p2	AF541279|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AK046782|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266266|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	AY266267|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed	NM_177664|D3Bwg0562e|229791|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm9_v1_chr2_+_37307786_37307807	0.882171	NFIX.p2	AK029667|Rabgap1|227800|RAB GTPase activating protein 1
mm9_v1_chr5_-_110715027_110715078	0.881587	NFIX.p2	BC057975|Pxmp2|19301|peroxisomal membrane protein 2	AF309644|Pxmp2|19301|peroxisomal membrane protein 2	AK003118|Pxmp2|19301|peroxisomal membrane protein 2
mm9_v1_chr13_+_32893882_32893918	0.881113	NFIX.p2	AK050368|Wrnip1|78903|Werner helicase interacting protein 1	AK167570|Wrnip1|78903|Werner helicase interacting protein 1	NM_030215|Wrnip1|78903|Werner helicase interacting protein 1	AK170542|Wrnip1|78903|Werner helicase interacting protein 1	BC010482|Wrnip1|78903|Werner helicase interacting protein 1	AK170846|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr8_+_73429830_73429980	0.878803	NFIX.p2	BC150729|Mtap1s|270058|microtubule-associated protein 1S	NM_173013|Mtap1s|270058|microtubule-associated protein 1S	AK082854|Mtap1s|270058|microtubule-associated protein 1S	AK042159|Mtap1s|270058|microtubule-associated protein 1S	AK032300|Mtap1s|270058|microtubule-associated protein 1S	DQ387862|Mtap1s|270058|microtubule-associated protein 1S	BC058166|Mtap1s|270058|microtubule-associated protein 1S	BC079598|Mtap1s|270058|microtubule-associated protein 1S
mm9_v1_chr9_+_111341608_111341622	0.87588	NFIX.p2	AK050312|Dclk3|245038|doublecortin-like kinase 3	DQ286388|Dclk3|245038|doublecortin-like kinase 3
mm9_v1_chr2_+_158492854_158492905	0.87359	NFIX.p2	AK044453|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	NM_001159662|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC054764|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	BC057542|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AF423761|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B	AK042123|Ppp1r16b|228852|protein phosphatase 1, regulatory (inhibitor) subunit 16B
mm9_v1_chr2_+_25356320_25356408	0.873483	NFIX.p2	AF176520|Fbxw5|30839|F-box and WD-40 domain protein 5	BC010776|Fbxw5|30839|F-box and WD-40 domain protein 5	AK154911|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr14_+_41945059_41945084	0.871022	NFIX.p2	AK011333|Sftpa1|20387|surfactant associated protein A1	AK004620|Sftpa1|20387|surfactant associated protein A1	AK004788|Sftpa1|20387|surfactant associated protein A1	AK075702|Sftpa1|20387|surfactant associated protein A1	BC061096|Sftpa1|20387|surfactant associated protein A1	NM_023134|Sftpa1|20387|surfactant associated protein A1
mm9_v1_chr7_+_133903118_133903185	0.86715	NFIX.p2	NM_011952|Mapk3|26417|mitogen-activated protein kinase 3	BC029712|Mapk3|26417|mitogen-activated protein kinase 3	Z14249|Mapk3|26417|mitogen-activated protein kinase 3
mm9_v1_chr15_+_91503654_91503682	0.860644	NFIX.p2	AK052591|Lrrk2|66725|leucine-rich repeat kinase 2	NM_025730|Lrrk2|66725|leucine-rich repeat kinase 2
mm9_v1_chr7_-_88837850_88837850	0.855624	NFIX.p2	NM_001164087|Homer2|26557|homer homolog 2 (Drosophila)
mm9_v1_chr19_+_53385022_53385154	0.854758	NFIX.p2	D31824|Mxi1|17859|Max interacting protein 1
mm9_v1_chr7_+_3303770_3303847	0.85032	NFIX.p2	BC111807|Prkcc|18752|protein kinase C, gamma	X67129|Prkcc|18752|protein kinase C, gamma
mm9_v1_chr13_+_32893953_32893987	0.848567	NFIX.p2	AK082078|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr6_+_115803545_115803666	0.843994	NFIX.p2	NM_001167763|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	NM_031177|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK044456|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167330|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK167412|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC060621|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK131115|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC066083|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	BC067415|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)	AK031308|Ift122|81896|intraflagellar transport 122 homolog (Chlamydomonas)
mm9_v1_chr16_+_29209780_29209780	0.840439	NFIX.p2	AK039471|Hrasls|27281|HRAS-like suppressor	NM_013751|Hrasls|27281|HRAS-like suppressor
mm9_v1_chr7_-_7251434_7251459	0.837645	NFIX.p2	AK035804|Clcn4-2|12727|chloride channel 4-2
mm9_v1_chr3_-_57496415_57496458	0.837461	NFIX.p2	AK134766|Gm410|242037|predicted gene 410	AK138483|Gm410|242037|predicted gene 410	NM_001033349|Gm410|242037|predicted gene 410
mm9_v1_chr2_-_26244767_26244830	0.835676	NFIX.p2	BC031199|Sdccag3|68112|serologically defined colon cancer antigen 3	AK014885|Sdccag3|68112|serologically defined colon cancer antigen 3	BC061037|Sdccag3|68112|serologically defined colon cancer antigen 3	AK082787|Sdccag3|68112|serologically defined colon cancer antigen 3	AK163690|Sdccag3|68112|serologically defined colon cancer antigen 3	AK021273|Sdccag3|68112|serologically defined colon cancer antigen 3	BC005612|Sdccag3|68112|serologically defined colon cancer antigen 3
mm9_v1_chr8_-_108375786_108375962	0.834097	NFIX.p2	AK182753|Cenpt|320394|centromere protein T	AK143613|Cenpt|320394|centromere protein T	BC080832|Cenpt|320394|centromere protein T	BC100321|Cenpt|320394|centromere protein T	AK090340|Cenpt|320394|centromere protein T	AK167376|Cenpt|320394|centromere protein T	BC121824|Cenpt|320394|centromere protein T	NM_177150|Cenpt|320394|centromere protein T	AK089172|Cenpt|320394|centromere protein T
mm9_v1_chr11_-_78349594_78349761	0.832384	NFIX.p2	BC003906|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK168386|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK147809|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK168805|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK004593|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK172287|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK168704|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	AK034305|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	NM_001159392|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)	NM_009395|Tnfaip1|21927|tumor necrosis factor, alpha-induced protein 1 (endothelial)
mm9_v1_chr1_+_55188086_55188145	0.831432	NFIX.p2	NM_025283|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK162327|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK147857|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK020446|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC028500|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC037499|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC058168|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	BC052475|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)	U01138|Mobkl3|19070|MOB1, Mps One Binder kinase activator-like 3 (yeast)
mm9_v1_chr7_+_133903186_133903314	0.829425	NFIX.p2	S58470|Mapk3|26417|mitogen-activated protein kinase 3	BC013754|Mapk3|26417|mitogen-activated protein kinase 3
mm9_v1_chr7_-_108080671_108080707	0.82612	NFIX.p2	NM_001081116|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr4_-_137882005_137882036	0.820565	NFIX.p2	BC018561|Pink1|68943|PTEN induced putative kinase 1
mm9_v1_chr6_-_149050201_149050210	0.815546	NFIX.p2	NM_177192|Dennd5b|320560|DENN/MADD domain containing 5B
mm9_v1_chr8_-_55809700_55809720	0.808912	NFIX.p2	AK013889|Wdr17|244484|WD repeat domain 17	AK020995|Wdr17|244484|WD repeat domain 17	AK044241|Wdr17|244484|WD repeat domain 17	NM_001172152|Wdr17|244484|WD repeat domain 17
mm9_v1_chr1_+_12708582_12708625	0.808434	NFIX.p2	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr5_+_136165013_136165105	0.806089	NFIX.p2	BC003240|Por|18984|P450 (cytochrome) oxidoreductase	AK131867|Por|18984|P450 (cytochrome) oxidoreductase	BC031463|Por|18984|P450 (cytochrome) oxidoreductase	D17571|Por|18984|P450 (cytochrome) oxidoreductase	NM_008898|Por|18984|P450 (cytochrome) oxidoreductase	AK192112|Por|18984|P450 (cytochrome) oxidoreductase
mm9_v1_chr7_+_53039094_53039107	0.805064	NFIX.p2	BC059845|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr11_-_118216689_118216724	0.801947	NFIX.p2	NM_011594|Timp2|21858|tissue inhibitor of metalloproteinase 2
mm9_v1_chr19_+_53751795_53751795	0.798777	NFIX.p2	AK142175|Rbm20|73713|RNA binding motif protein 20	NM_001170847|Rbm20|73713|RNA binding motif protein 20
mm9_v1_chr2_+_25356281_25356297	0.79669	NFIX.p2	AK019715|Fbxw5|30839|F-box and WD-40 domain protein 5	NM_013908|Fbxw5|30839|F-box and WD-40 domain protein 5
mm9_v1_chr1_+_196446049_196446240	0.795936	NFIX.p2	D86949|Plxna2|18845|plexin A2	BC068155|Plxna2|18845|plexin A2
mm9_v1_chr17_+_46390828_46391138	0.787462	NFIX.p2	AK134769|Gm88|224813|predicted gene 88	NM_001111142|Gm88|224813|predicted gene 88	BC147714|Gm88|224813|predicted gene 88	BC172136|Gm88|224813|predicted gene 88
mm9_v1_chr11_+_17059301_17059317	0.784676	NFIX.p2	AK160938|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr7_-_53069599_53069692	0.784406	NFIX.p2	BC004662|Cyth2|19158|cytohesin 2	AB013466|Cyth2|19158|cytohesin 2	AK168979|Cyth2|19158|cytohesin 2	AK143829|Cyth2|19158|cytohesin 2	AK172050|Cyth2|19158|cytohesin 2	AF079971|Cyth2|19158|cytohesin 2	AK045451|Cyth2|19158|cytohesin 2	BC088833|Cyth2|19158|cytohesin 2	AK078067|Cyth2|19158|cytohesin 2	NM_001112701|Cyth2|19158|cytohesin 2	NM_011181|Cyth2|19158|cytohesin 2
mm9_v1_chr12_+_88488691_88488760	0.780944	NFIX.p2	AK002398|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	AK075927|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	AF093418|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr9_-_75458954_75458978	0.774348	NFIX.p2	AK079077|Tmod2|50876|tropomodulin 2	AK164178|Tmod2|50876|tropomodulin 2
mm9_v1_chr12_+_50483869_50483993	0.774149	NFIX.p2	AK132305|Foxg1|15228|forkhead box G1	NM_001160112|Foxg1|15228|forkhead box G1	NM_008241|Foxg1|15228|forkhead box G1	U36760|Foxg1|15228|forkhead box G1
mm9_v1_chr4_-_125933482_125933589	0.773463	NFIX.p2	BC023677|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	BC023774|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	AK151613|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_001145970|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1	NM_144941|Mtap7d1|245877|microtubule-associated protein 7 domain containing 1
mm9_v1_chrX_-_7000037_7000113	0.772562	NFIX.p2	BC072610|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AF038507|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene	AK008437|2010204K13Rik|68355|RIKEN cDNA 2010204K13 gene
mm9_v1_chrX_+_132804865_132804886	0.772423	NFIX.p2	AF187066|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	AK010500|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	AF097440|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1	BC027815|Ngfrap1|12070|nerve growth factor receptor (TNFRSF16) associated protein 1
mm9_v1_chr7_-_120512849_120512864	0.772295	NFIX.p2	BC050781|Btbd10|68815|BTB (POZ) domain containing 10	NM_133700|Btbd10|68815|BTB (POZ) domain containing 10
mm9_v1_chr13_-_30637108_30637234	0.771796	NFIX.p2	AK012180|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK003966|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK153139|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	NM_025710|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK014470|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	BC019934|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	BC047125|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK152391|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
mm9_v1_chr5_+_115392192_115392243	0.76833	NFIX.p2	AK135000|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	BC031162|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	NM_028211|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	AK008740|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	AK159360|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene
mm9_v1_chr5_-_5694033_5694105	0.766555	NFIX.p2	AK145468|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK166607|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK162343|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK165644|Steap2|74051|six transmembrane epithelial antigen of prostate 2	AK089927|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_001103156|Steap2|74051|six transmembrane epithelial antigen of prostate 2	NM_001103157|Steap2|74051|six transmembrane epithelial antigen of prostate 2
mm9_v1_chr11_-_102268716_102268747	0.762772	NFIX.p2	BC115661|Slc25a39|68066|solute carrier family 25, member 39	BC115662|Slc25a39|68066|solute carrier family 25, member 39
mm9_v1_chr18_+_24867945_24868023	0.760238	NFIX.p2	AB078608|Fhod3|225288|formin homology 2 domain containing 3	AB078609|Fhod3|225288|formin homology 2 domain containing 3	AB100088|Fhod3|225288|formin homology 2 domain containing 3	NM_175276|Fhod3|225288|formin homology 2 domain containing 3	AK148245|Fhod3|225288|formin homology 2 domain containing 3	BC138046|Fhod3|225288|formin homology 2 domain containing 3
mm9_v1_chr5_-_110715166_110715186	0.759491	NFIX.p2	NM_008993|Pxmp2|19301|peroxisomal membrane protein 2
mm9_v1_chr11_-_72029093_72029093	0.756934	NFIX.p2	BC051929|Med31|67279|mediator of RNA polymerase II transcription, subunit 31 homolog (yeast)	NM_026068|Med31|67279|mediator of RNA polymerase II transcription, subunit 31 homolog (yeast)
mm9_v1_chr3_+_54165028_54165059	0.754791	NFIX.p2	NM_001198765|Postn|50706|periostin, osteoblast specific factor	NM_001198766|Postn|50706|periostin, osteoblast specific factor	NM_015784|Postn|50706|periostin, osteoblast specific factor	AK030756|Postn|50706|periostin, osteoblast specific factor	AK154049|Postn|50706|periostin, osteoblast specific factor	D13664|Postn|50706|periostin, osteoblast specific factor	BC007141|Postn|50706|periostin, osteoblast specific factor	AY651928|Postn|50706|periostin, osteoblast specific factor	BC031449|Postn|50706|periostin, osteoblast specific factor
mm9_v1_chr11_-_116515361_116515394	0.753821	NFIX.p2	AK172475|Cygb|114886|cytoglobin	AK163073|Cygb|114886|cytoglobin
mm9_v1_chr12_+_117724182_117724212	0.753719	NFIX.p2	NM_011215|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	AK081267|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	AK138655|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2	BC048570|Ptprn2|19276|protein tyrosine phosphatase, receptor type, N polypeptide 2
mm9_v1_chr13_+_32893929_32893948	0.751333	NFIX.p2	AK041886|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr8_+_114535258_114535298	0.746436	NFIX.p2	NM_020584|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK161452|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	BC017641|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK148537|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK148508|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein
mm9_v1_chr2_+_163820920_163821078	0.744151	NFIX.p2	AK150414|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK151294|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK004872|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK011389|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	NM_018753|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AF058797|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK083367|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK158932|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK204033|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC132121|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	BC138512|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr2_+_163820857_163820914	0.74198	NFIX.p2	AK144061|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	AK002632|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr2_+_181414995_181415018	0.735549	NFIX.p2	D86081|Tcea2|21400|transcription elongation factor A (SII), 2	NM_009326|Tcea2|21400|transcription elongation factor A (SII), 2	AK131650|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr11_+_59319892_59319945	0.734309	NFIX.p2	BC099591|4933439C10Rik|74476|RIKEN cDNA 4933439C10 gene
mm9_v1_chr7_+_148445746_148445836	0.734238	NFIX.p2	AK164283|Phrf1|101471|PHD and ring finger domains 1
mm9_v1_chr10_+_20672352_20672469	0.73278	NFIX.p2	AK080373|Ahi1|52906|Abelson helper integration site 1	NM_026203|Ahi1|52906|Abelson helper integration site 1	AK005991|Ahi1|52906|Abelson helper integration site 1	AK013997|Ahi1|52906|Abelson helper integration site 1	AK019416|Ahi1|52906|Abelson helper integration site 1	BC106130|Ahi1|52906|Abelson helper integration site 1	BC065146|Ahi1|52906|Abelson helper integration site 1	AK036336|Ahi1|52906|Abelson helper integration site 1	AY133241|Ahi1|52906|Abelson helper integration site 1
mm9_v1_chr4_+_137263376_137263436	0.731555	NFIX.p2	AK019076|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chr4_+_126234210_126234268	0.728854	NFIX.p2	AK053847|Clspn|269582|claspin homolog (Xenopus laevis)	NM_175554|Clspn|269582|claspin homolog (Xenopus laevis)	AK045076|Clspn|269582|claspin homolog (Xenopus laevis)	AK135394|Clspn|269582|claspin homolog (Xenopus laevis)	AK051966|Clspn|269582|claspin homolog (Xenopus laevis)	BC050848|Clspn|269582|claspin homolog (Xenopus laevis)
mm9_v1_chr17_-_15963372_15963555	0.727453	NFIX.p2	BC138890|Rgmb|68799|RGM domain family, member B	AK035713|Rgmb|68799|RGM domain family, member B	AK046637|Rgmb|68799|RGM domain family, member B	AK080819|Rgmb|68799|RGM domain family, member B	BC096024|Rgmb|68799|RGM domain family, member B	AK030386|Rgmb|68799|RGM domain family, member B	AK047390|Rgmb|68799|RGM domain family, member B	BC030405|Rgmb|68799|RGM domain family, member B	AJ557514|Rgmb|68799|RGM domain family, member B	NM_178615|Rgmb|68799|RGM domain family, member B
mm9_v1_chr14_-_9091396_9091464	0.722195	NFIX.p2	AK144243|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain	AJ238492|Acox2|93732|acyl-Coenzyme A oxidase 2, branched chain
mm9_v1_chr2_+_181415029_181415076	0.721091	NFIX.p2	AB010271|Tcea2|21400|transcription elongation factor A (SII), 2
mm9_v1_chr13_+_58909632_58909641	0.719485	NFIX.p2	AK147441|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr17_-_26645403_26645422	0.717443	NFIX.p2	BC006967|Dusp1|19252|dual specificity phosphatase 1	X61940|Dusp1|19252|dual specificity phosphatase 1	AK159658|Dusp1|19252|dual specificity phosphatase 1	AK150433|Dusp1|19252|dual specificity phosphatase 1	AK152183|Dusp1|19252|dual specificity phosphatase 1	AK152905|Dusp1|19252|dual specificity phosphatase 1	AK159251|Dusp1|19252|dual specificity phosphatase 1	AK159363|Dusp1|19252|dual specificity phosphatase 1	AK159567|Dusp1|19252|dual specificity phosphatase 1	AK167602|Dusp1|19252|dual specificity phosphatase 1	AK168627|Dusp1|19252|dual specificity phosphatase 1	NM_013642|Dusp1|19252|dual specificity phosphatase 1	AK145903|Dusp1|19252|dual specificity phosphatase 1	AK152324|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr12_-_70993995_70994059	0.716369	NFIX.p2	AK019468|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	BC040381|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK032123|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr1_-_94076857_94076917	0.712701	NFIX.p2	AK155250|Hdac4|208727|histone deacetylase 4
mm9_v1_chr14_+_34736806_34736957	0.706476	NFIX.p2	L42114|Gdf10|14560|growth differentiation factor 10	S82648|Gdf10|14560|growth differentiation factor 10
mm9_v1_chr9_-_96789818_96789892	0.703594	NFIX.p2	AK164254|Acpl2|235534|acid phosphatase-like 2	AK083712|Acpl2|235534|acid phosphatase-like 2	BC023960|Acpl2|235534|acid phosphatase-like 2	BC036342|Acpl2|235534|acid phosphatase-like 2	NM_153420|Acpl2|235534|acid phosphatase-like 2	AK043758|Acpl2|235534|acid phosphatase-like 2	AK082059|Acpl2|235534|acid phosphatase-like 2	AK084605|Acpl2|235534|acid phosphatase-like 2	AK144699|Acpl2|235534|acid phosphatase-like 2	AK036973|Acpl2|235534|acid phosphatase-like 2
mm9_v1_chr13_+_3537514_3537611	0.700143	NFIX.p2	L36314|Gdi2|14569|guanosine diphosphate (GDP) dissociation inhibitor 2
mm9_v1_chr19_-_31839462_31839522	0.698602	NFIX.p2	AK051624|Prkg1|19091|protein kinase, cGMP-dependent, type I	AK083991|Prkg1|19091|protein kinase, cGMP-dependent, type I	NM_001013833|Prkg1|19091|protein kinase, cGMP-dependent, type I
mm9_v1_chr12_-_86217386_86217481	0.695272	NFIX.p2	BC119785|Ltbp2|16997|latent transforming growth factor beta binding protein 2	AK052980|Ltbp2|16997|latent transforming growth factor beta binding protein 2	NM_013589|Ltbp2|16997|latent transforming growth factor beta binding protein 2	AF004874|Ltbp2|16997|latent transforming growth factor beta binding protein 2
mm9_v1_chr19_-_10630727_10630727	0.691799	NFIX.p2	AK003740|Tmem216|68642|transmembrane protein 216	NM_026798|Tmem216|68642|transmembrane protein 216
mm9_v1_chr16_-_30550494_30550593	0.691703	NFIX.p2	BC080307|Tmem44|224090|transmembrane protein 44
mm9_v1_chr8_+_11758376_11758449	0.689749	NFIX.p2	AF247654|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AF343877|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)
mm9_v1_chr3_+_32635988_32636035	0.687143	NFIX.p2	BC025155|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5
mm9_v1_chr18_+_45428413_45428658	0.686652	NFIX.p2	AK076494|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK033158|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr11_-_96805092_96805165	0.682532	NFIX.p2	AK154443|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr12_+_88019649_88019727	0.681455	NFIX.p2	AB284948|Vash1|238328|vasohibin 1	AK090166|Vash1|238328|vasohibin 1	NM_177354|Vash1|238328|vasohibin 1	AK086583|Vash1|238328|vasohibin 1
mm9_v1_chr1_+_63223396_63223420	0.679098	NFIX.p2	NM_018796|Eef1b2|55949|eukaryotic translation elongation factor 1 beta 2
mm9_v1_chr11_+_63893006_63893054	0.678364	NFIX.p2	AK005116|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene
mm9_v1_chr1_+_184339297_184339311	0.66999	NFIX.p2	NM_173378|Trp53bp2|209456|transformation related protein 53 binding protein 2
mm9_v1_chr11_+_17059319_17059327	0.669929	NFIX.p2	AK145541|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)	AK163241|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr15_-_97597988_97598129	0.669325	NFIX.p2	AK142594|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK044566|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK169430|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	AK162003|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	BC020532|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_001177810|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_001177811|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3	NM_144850|Rapgef3|223864|Rap guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr10_+_80720251_80720289	0.669305	NFIX.p2	AK079816|Matk|17179|megakaryocyte-associated tyrosine kinase	U05210|Matk|17179|megakaryocyte-associated tyrosine kinase	L27738|Matk|17179|megakaryocyte-associated tyrosine kinase	NM_010768|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr19_-_58528838_58529066	0.668105	NFIX.p2	AB000800|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC040251|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC054378|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	NM_010279|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	BC011532|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AF015172|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr6_-_115201846_115201865	0.663085	NFIX.p2	BC064046|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK038820|Timp4|110595|tissue inhibitor of metalloproteinase 4	AK040814|Timp4|110595|tissue inhibitor of metalloproteinase 4
mm9_v1_chr4_+_41702080_41702128	0.660314	NFIX.p2	NM_016658|Galt|14430|galactose-1-phosphate uridyl transferase
mm9_v1_chr10_+_79132224_79132234	0.659324	NFIX.p2	AK153467|Gm16517|110012|predicted gene, Gm16517
mm9_v1_chr19_+_17030600_17030608	0.655955	NFIX.p2	AK165582|Prune2|353211|prune homolog 2 (Drosophila)	AK020727|Prune2|353211|prune homolog 2 (Drosophila)	AK039241|Prune2|353211|prune homolog 2 (Drosophila)	AK165913|Prune2|353211|prune homolog 2 (Drosophila)	NM_181348|Prune2|353211|prune homolog 2 (Drosophila)
mm9_v1_chr14_-_55196138_55196410	0.655539	NFIX.p2	BC011035|Jub|16475|ajuba	NM_010590|Jub|16475|ajuba	U79776|Jub|16475|ajuba
mm9_v1_chr18_-_6240993_6241298	0.655235	NFIX.p2	AK185672|Kif5b|16573|kinesin family member 5B	AK177424|Kif5b|16573|kinesin family member 5B	L27153|Kif5b|16573|kinesin family member 5B
mm9_v1_chr1_+_164500694_164500958	0.654581	NFIX.p2	AK018344|Vamp4|53330|vesicle-associated membrane protein 4	AK002977|Vamp4|53330|vesicle-associated membrane protein 4	AK011678|Vamp4|53330|vesicle-associated membrane protein 4	AK031151|Vamp4|53330|vesicle-associated membrane protein 4	NM_016796|Vamp4|53330|vesicle-associated membrane protein 4
mm9_v1_chr16_+_31428833_31428879	0.645218	NFIX.p2	AK146321|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK145711|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_001122683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	AK146962|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr12_+_66066728_66067042	0.643253	NFIX.p2	NM_177805|Fam179b|328108|family with sequence similarity 179, member B	AK141238|Fam179b|328108|family with sequence similarity 179, member B	BC157958|Fam179b|328108|family with sequence similarity 179, member B	BC158008|Fam179b|328108|family with sequence similarity 179, member B	BC172117|Fam179b|328108|family with sequence similarity 179, member B	AK039995|Fam179b|328108|family with sequence similarity 179, member B
mm9_v1_chr6_+_48791481_48791563	0.638071	NFIX.p2	NM_025326|Tmem176a|66058|transmembrane protein 176A	AK002546|Tmem176a|66058|transmembrane protein 176A	AK004315|Tmem176a|66058|transmembrane protein 176A	AK165660|Tmem176a|66058|transmembrane protein 176A	AK150576|Tmem176a|66058|transmembrane protein 176A	AK079378|Tmem176a|66058|transmembrane protein 176A	BC010831|Tmem176a|66058|transmembrane protein 176A	AK162991|Tmem176a|66058|transmembrane protein 176A
mm9_v1_chr4_+_101180625_101180708	0.635789	NFIX.p2	AK147570|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK147637|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chr17_-_25707599_25707638	0.635483	NFIX.p2	BC043704|Sox8|20681|SRY-box containing gene 8	BC085619|Sox8|20681|SRY-box containing gene 8	AK032459|Sox8|20681|SRY-box containing gene 8	AK033460|Sox8|20681|SRY-box containing gene 8	AK034231|Sox8|20681|SRY-box containing gene 8	AK046473|Sox8|20681|SRY-box containing gene 8	AK053716|Sox8|20681|SRY-box containing gene 8	AK145294|Sox8|20681|SRY-box containing gene 8	NM_011447|Sox8|20681|SRY-box containing gene 8
mm9_v1_chr1_+_193399604_193399618	0.63513	NFIX.p2	AK085362|Ints7|77065|integrator complex subunit 7	AK086462|Ints7|77065|integrator complex subunit 7	NM_178632|Ints7|77065|integrator complex subunit 7	AK040344|Ints7|77065|integrator complex subunit 7
mm9_v1_chr7_-_7251473_7251490	0.631858	NFIX.p2	AK133759|Clcn4-2|12727|chloride channel 4-2	AK160325|Clcn4-2|12727|chloride channel 4-2
mm9_v1_chr11_+_5688463_5688609	0.62923	NFIX.p2	NM_001146308|Dbnl|13169|drebrin-like	NM_001146309|Dbnl|13169|drebrin-like	NM_013810|Dbnl|13169|drebrin-like	AK053796|Dbnl|13169|drebrin-like	AK046073|Dbnl|13169|drebrin-like	AK151096|Dbnl|13169|drebrin-like	AK152204|Dbnl|13169|drebrin-like	AK153072|Dbnl|13169|drebrin-like	AK161973|Dbnl|13169|drebrin-like	AK159984|Dbnl|13169|drebrin-like	AK168898|Dbnl|13169|drebrin-like	AK134136|Dbnl|13169|drebrin-like	AK134487|Dbnl|13169|drebrin-like	AK140752|Dbnl|13169|drebrin-like	AK146920|Dbnl|13169|drebrin-like	AK152110|Dbnl|13169|drebrin-like	BC046430|Dbnl|13169|drebrin-like	AK078082|Dbnl|13169|drebrin-like	AK172471|Dbnl|13169|drebrin-like	U58884|Dbnl|13169|drebrin-like	AK153389|Dbnl|13169|drebrin-like	AK142818|Dbnl|13169|drebrin-like	AK167956|Dbnl|13169|drebrin-like	AY098595|Dbnl|13169|drebrin-like	AK199448|Dbnl|13169|drebrin-like	AK203166|Dbnl|13169|drebrin-like
mm9_v1_chr4_+_122960527_122960606	0.625746	NFIX.p2	BC010345|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	NM_148917|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4	BC003283|Pabpc4|230721|poly(A) binding protein, cytoplasmic 4
mm9_v1_chr8_+_97296110_97296164	0.62572	NFIX.p2	BC054838|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC057891|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	BC006650|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AK040220|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	AF010586|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1	U92565|Cx3cl1|20312|chemokine (C-X3-C motif) ligand 1
mm9_v1_chr5_-_107125783_107125868	0.625633	NFIX.p2	AK053146|Zfp644|52397|zinc finger protein 644	NM_026856|Zfp644|52397|zinc finger protein 644
mm9_v1_chr12_-_113205172_113205207	0.624161	NFIX.p2	BC059719|2010107E04Rik|70257|RIKEN cDNA 2010107E04 gene	AK008333|2010107E04Rik|70257|RIKEN cDNA 2010107E04 gene	NM_027360|2010107E04Rik|70257|RIKEN cDNA 2010107E04 gene
mm9_v1_chr14_+_34736772_34736788	0.618528	NFIX.p2	BC058358|Gdf10|14560|growth differentiation factor 10	NM_145741|Gdf10|14560|growth differentiation factor 10	AK042684|Gdf10|14560|growth differentiation factor 10
mm9_v1_chr11_+_17059297_17059300	0.618105	NFIX.p2	NM_024459|Ppp3r1|19058|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm9_v1_chr7_+_3303657_3303670	0.61338	NFIX.p2	AK144419|Prkcc|18752|protein kinase C, gamma	NM_011102|Prkcc|18752|protein kinase C, gamma
mm9_v1_chr8_+_107872157_107872157	0.605719	NFIX.p2	NM_001081332|Slc9a5|277973|solute carrier family 9 (sodium/hydrogen exchanger), member 5
mm9_v1_chr7_-_7251462_7251471	0.604117	NFIX.p2	DQ186662|Clcn4-2|12727|chloride channel 4-2	AK088317|Clcn4-2|12727|chloride channel 4-2
mm9_v1_chr6_-_83522410_83522497	0.600621	NFIX.p2	AK136961|Stambp|70527|STAM binding protein	AK220541|Stambp|70527|STAM binding protein	BC006939|Stambp|70527|STAM binding protein	BC003497|Stambp|70527|STAM binding protein	BC025111|Stambp|70527|STAM binding protein	AB010123|Stambp|70527|STAM binding protein	AK019907|Stambp|70527|STAM binding protein	AK046995|Stambp|70527|STAM binding protein	AK017600|Stambp|70527|STAM binding protein	AK168810|Stambp|70527|STAM binding protein	AK139391|Stambp|70527|STAM binding protein	NM_024239|Stambp|70527|STAM binding protein
mm9_v1_chr9_+_111341538_111341596	0.600258	NFIX.p2	NM_172928|Dclk3|245038|doublecortin-like kinase 3	AK135010|Dclk3|245038|doublecortin-like kinase 3
mm9_v1_chr18_-_7004711_7004776	0.599886	NFIX.p2	BC137728|Mkx|210719|mohawk homeobox	AK034675|Mkx|210719|mohawk homeobox	NM_177595|Mkx|210719|mohawk homeobox
mm9_v1_chr18_-_74224541_74224647	0.599066	NFIX.p2	AK157930|Mapk4|225724|mitogen-activated protein kinase 4	AK046051|Mapk4|225724|mitogen-activated protein kinase 4	AK079654|Mapk4|225724|mitogen-activated protein kinase 4	NM_172632|Mapk4|225724|mitogen-activated protein kinase 4
mm9_v1_chr11_-_90548862_90548939	0.598989	NFIX.p2	AK181527|Tom1l1|71943|target of myb1-like 1 (chicken)	AJ505007|Tom1l1|71943|target of myb1-like 1 (chicken)	AK009826|Tom1l1|71943|target of myb1-like 1 (chicken)	AK083630|Tom1l1|71943|target of myb1-like 1 (chicken)	AF395837|Tom1l1|71943|target of myb1-like 1 (chicken)	AK033712|Tom1l1|71943|target of myb1-like 1 (chicken)	NM_028011|Tom1l1|71943|target of myb1-like 1 (chicken)
mm9_v1_chr17_-_66868909_66869045	0.598578	NFIX.p2	AB232607|Rab12|19328|RAB12, member RAS oncogene family	NM_024448|Rab12|19328|RAB12, member RAS oncogene family
mm9_v1_chr15_-_78633301_78633471	0.597443	NFIX.p2	BC060203|Card10|105844|caspase recruitment domain family, member 10	NM_130859|Card10|105844|caspase recruitment domain family, member 10
mm9_v1_chr11_-_33743416_33743626	0.596637	NFIX.p2	AY647242|Kcnip1|70357|Kv channel-interacting protein 1	AY171234|Kcnip1|70357|Kv channel-interacting protein 1	BC034241|Kcnip1|70357|Kv channel-interacting protein 1	DQ148493|Kcnip1|70357|Kv channel-interacting protein 1	AK013657|Kcnip1|70357|Kv channel-interacting protein 1	AK014313|Kcnip1|70357|Kv channel-interacting protein 1	AK046398|Kcnip1|70357|Kv channel-interacting protein 1	AK045948|Kcnip1|70357|Kv channel-interacting protein 1	NM_001190885|Kcnip1|70357|Kv channel-interacting protein 1	NM_027398|Kcnip1|70357|Kv channel-interacting protein 1
mm9_v1_chr2_+_172825651_172825682	0.59631	NFIX.p2	AK146058|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK156681|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK014325|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK035278|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr15_+_25552273_25552341	0.595653	NFIX.p2	AK028552|Myo10|17909|myosin X	AK089482|Myo10|17909|myosin X	NM_019472|Myo10|17909|myosin X
mm9_v1_chr11_+_61298923_61298953	0.592362	NFIX.p2	NM_029568|Mfap4|76293|microfibrillar-associated protein 4	AK003537|Mfap4|76293|microfibrillar-associated protein 4	BC022666|Mfap4|76293|microfibrillar-associated protein 4
mm9_v1_chr5_+_130007103_130007146	0.59163	NFIX.p2	NM_172276|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK140369|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK031872|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK088182|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	AK170748|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC057314|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC034336|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC034665|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC013466|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)	BC036315|Sfswap|231769|splicing factor, suppressor of white-apricot homolog (Drosophila)
mm9_v1_chr14_-_33015012_33015098	0.589509	NFIX.p2	BC062963|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK013976|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132019|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC132319|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC096669|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AK146516|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC037022|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	BC069903|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	AB021122|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)	NM_016897|Timm23|53600|translocase of inner mitochondrial membrane 23 homolog (yeast)
mm9_v1_chr5_-_52957466_52957483	0.585198	NFIX.p2	AK122570|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr12_+_114214654_114214807	0.582053	NFIX.p2	NM_001145900|Btbd6|399566|BTB (POZ) domain containing 6	BC031195|Btbd6|399566|BTB (POZ) domain containing 6	NM_201646|Btbd6|399566|BTB (POZ) domain containing 6
mm9_v1_chr8_+_125641197_125641276	0.581886	NFIX.p2	AK162900|Cpne7|102278|copine VII	NM_170684|Cpne7|102278|copine VII
mm9_v1_chr3_+_79395280_79395367	0.574989	NFIX.p2	AK150520|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK151091|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	BC019778|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	NM_026352|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	BC011499|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK016221|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK013919|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK051597|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)	AK003402|Ppid|67738|peptidylprolyl isomerase D (cyclophilin D)
mm9_v1_chr3_-_107734481_107734662	0.573265	NFIX.p2	AK162441|Gstm7|68312|glutathione S-transferase, mu 7	AK002213|Gstm7|68312|glutathione S-transferase, mu 7	BC051924|Gstm7|68312|glutathione S-transferase, mu 7	NM_026672|Gstm7|68312|glutathione S-transferase, mu 7
mm9_v1_chr9_+_56266618_56266679	0.570884	NFIX.p2	AK088542|Hmg20a|66867|high mobility group 20A	AK032790|Hmg20a|66867|high mobility group 20A	AK039222|Hmg20a|66867|high mobility group 20A	AK004596|Hmg20a|66867|high mobility group 20A	AK086346|Hmg20a|66867|high mobility group 20A	AK154075|Hmg20a|66867|high mobility group 20A	BC013804|Hmg20a|66867|high mobility group 20A	DQ182735|Hmg20a|66867|high mobility group 20A	NM_025812|Hmg20a|66867|high mobility group 20A	AL355705|Hmg20a|66867|high mobility group 20A
mm9_v1_chr4_-_134989653_134989790	0.566849	NFIX.p2	AK042201|Rcan3|53902|regulator of calcineurin 3	AK155270|Rcan3|53902|regulator of calcineurin 3	NM_022980|Rcan3|53902|regulator of calcineurin 3	AK043916|Rcan3|53902|regulator of calcineurin 3
mm9_v1_chr11_+_63892985_63892998	0.56673	NFIX.p2	AK007927|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene	AK012631|2810001G20Rik|66456|RIKEN cDNA 2810001G20 gene
mm9_v1_chr6_-_39327637_39327722	0.566161	NFIX.p2	BC099673|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK076213|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK077836|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK167716|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	BC005744|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK145242|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	NM_028123|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm9_v1_chr11_+_59320146_59320183	0.561922	NFIX.p2	AK051100|4933439C10Rik|74476|RIKEN cDNA 4933439C10 gene
mm9_v1_chr4_-_49533914_49533978	0.56119	NFIX.p2	AK075787|Mrpl50|28028|mitochondrial ribosomal protein L50	AK002646|Mrpl50|28028|mitochondrial ribosomal protein L50	AK049421|Mrpl50|28028|mitochondrial ribosomal protein L50	AK007405|Mrpl50|28028|mitochondrial ribosomal protein L50	AK031229|Mrpl50|28028|mitochondrial ribosomal protein L50	NM_178603|Mrpl50|28028|mitochondrial ribosomal protein L50	AK002686|Mrpl50|28028|mitochondrial ribosomal protein L50
mm9_v1_chr7_-_133942767_133942800	0.560015	NFIX.p2	NM_007438|Aldoa|11674|aldolase A, fructose-bisphosphate
mm9_v1_chr11_+_75300278_75300323	0.558143	NFIX.p2	NM_138659|Prpf8|192159|pre-mRNA processing factor 8	AK041017|Prpf8|192159|pre-mRNA processing factor 8
mm9_v1_chr8_+_125641346_125641374	0.558108	NFIX.p2	AK049823|Cpne7|102278|copine VII	BC119328|Cpne7|102278|copine VII	BC137595|Cpne7|102278|copine VII
mm9_v1_chr10_-_58684199_58684290	0.55672	NFIX.p2	BC053752|Sept10|103080|septin 10
mm9_v1_chr13_-_12432984_12433003	0.552372	NFIX.p2	AY036877|Actn2|11472|actinin alpha 2	AK047768|Actn2|11472|actinin alpha 2	BC089579|Actn2|11472|actinin alpha 2	NM_033268|Actn2|11472|actinin alpha 2
mm9_v1_chr18_-_36838969_36839019	0.547884	NFIX.p2	AK171634|Apbb3|225372|amyloid beta (A4) precursor protein-binding, family B, member 3	BC024809|Apbb3|225372|amyloid beta (A4) precursor protein-binding, family B, member 3	NM_146085|Apbb3|225372|amyloid beta (A4) precursor protein-binding, family B, member 3
mm9_v1_chrX_-_70905384_70905478	0.547692	NFIX.p2	BC055891|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase	BC051996|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase	AK158755|Pnck|93843|pregnancy upregulated non-ubiquitously expressed CaM kinase
mm9_v1_chr11_+_32355355_32355458	0.542894	NFIX.p2	AK076953|Ubtd2|327900|ubiquitin domain containing 2	BC057026|Ubtd2|327900|ubiquitin domain containing 2	NM_173784|Ubtd2|327900|ubiquitin domain containing 2
mm9_v1_chr15_-_88971039_88971132	0.542729	NFIX.p2	BC021640|Mapk12|29857|mitogen-activated protein kinase 12	Y13439|Mapk12|29857|mitogen-activated protein kinase 12	AK011286|Mapk12|29857|mitogen-activated protein kinase 12	AK165741|Mapk12|29857|mitogen-activated protein kinase 12	NM_013871|Mapk12|29857|mitogen-activated protein kinase 12
mm9_v1_chrX_-_92221960_92222040	0.540935	NFIX.p2	AK155170|Spin4|270624|spindlin family, member 4	BC027796|Spin4|270624|spindlin family, member 4	AK047896|Spin4|270624|spindlin family, member 4	AK147852|Spin4|270624|spindlin family, member 4	AK043030|Spin4|270624|spindlin family, member 4	AK036158|Spin4|270624|spindlin family, member 4	NM_178753|Spin4|270624|spindlin family, member 4
mm9_v1_chr9_+_107465568_107465700	0.537445	NFIX.p2	AK082684|Tusc2|80385|tumor suppressor candidate 2	BC048477|Tusc2|80385|tumor suppressor candidate 2	NM_019742|Tusc2|80385|tumor suppressor candidate 2	AK004430|Tusc2|80385|tumor suppressor candidate 2	AF123387|Tusc2|80385|tumor suppressor candidate 2
mm9_v1_chr18_-_39649499_39649545	0.529648	NFIX.p2	AK156323|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr15_-_43701569_43701581	0.527647	NFIX.p2	BC076589|Tmem74|239408|transmembrane protein 74	AK046420|Tmem74|239408|transmembrane protein 74	NM_175502|Tmem74|239408|transmembrane protein 74	AK045145|Tmem74|239408|transmembrane protein 74
mm9_v1_chr1_-_134036041_134036303	0.526992	NFIX.p2	AK171569|Cdk18|18557|cyclin-dependent kinase 18	BC119617|Cdk18|18557|cyclin-dependent kinase 18	BC119618|Cdk18|18557|cyclin-dependent kinase 18	AK004998|Cdk18|18557|cyclin-dependent kinase 18	X69026|Cdk18|18557|cyclin-dependent kinase 18	NM_008795|Cdk18|18557|cyclin-dependent kinase 18
mm9_v1_chr19_+_45438212_45438344	0.524361	NFIX.p2	NM_001037758|Btrc|12234|beta-transducin repeat containing protein	NM_009771|Btrc|12234|beta-transducin repeat containing protein	AK220183|Btrc|12234|beta-transducin repeat containing protein	AK145624|Btrc|12234|beta-transducin repeat containing protein	AK052317|Btrc|12234|beta-transducin repeat containing protein	AK083257|Btrc|12234|beta-transducin repeat containing protein	AF081887|Btrc|12234|beta-transducin repeat containing protein	AK032221|Btrc|12234|beta-transducin repeat containing protein	AK145091|Btrc|12234|beta-transducin repeat containing protein	BC052879|Btrc|12234|beta-transducin repeat containing protein	BC003989|Btrc|12234|beta-transducin repeat containing protein	AF099932|Btrc|12234|beta-transducin repeat containing protein	AF110396|Btrc|12234|beta-transducin repeat containing protein	AF112979|Btrc|12234|beta-transducin repeat containing protein	AK180045|Btrc|12234|beta-transducin repeat containing protein	AK188552|Btrc|12234|beta-transducin repeat containing protein	AK189588|Btrc|12234|beta-transducin repeat containing protein
mm9_v1_chr2_+_130953108_130953187	0.522653	NFIX.p2	BC011103|Hspa12b|72630|heat shock protein 12B	NM_028306|Hspa12b|72630|heat shock protein 12B	AK012548|Hspa12b|72630|heat shock protein 12B
mm9_v1_chr17_-_26227104_26227112	0.518627	NFIX.p2	AF155575|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal	NM_011933|Decr2|26378|2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
mm9_v1_chr3_+_101890431_101890567	0.517944	NFIX.p2	AF068244|Casq2|12373|calsequestrin 2	NM_009814|Casq2|12373|calsequestrin 2	BC092229|Casq2|12373|calsequestrin 2	BC137668|Casq2|12373|calsequestrin 2	BC140959|Casq2|12373|calsequestrin 2	U91483|Casq2|12373|calsequestrin 2
mm9_v1_chr6_+_113421513_113421567	0.517629	NFIX.p2	AF458066|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr1_-_163181251_163181302	0.513889	NFIX.p2	BC013489|Prdx6|11758|peroxiredoxin 6	AK172888|Prdx6|11758|peroxiredoxin 6	AF004670|Prdx6|11758|peroxiredoxin 6	AK168223|Prdx6|11758|peroxiredoxin 6	AK076191|Prdx6|11758|peroxiredoxin 6	AK035097|Prdx6|11758|peroxiredoxin 6	AK081980|Prdx6|11758|peroxiredoxin 6	AF093852|Prdx6|11758|peroxiredoxin 6	AK030413|Prdx6|11758|peroxiredoxin 6	AK161710|Prdx6|11758|peroxiredoxin 6	BC061181|Prdx6|11758|peroxiredoxin 6	NM_007453|Prdx6|11758|peroxiredoxin 6
mm9_v1_chr10_-_40021920_40021980	0.511896	NFIX.p2	Z14986|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC092072|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC011110|Amd1|11702|S-adenosylmethionine decarboxylase 1	BC071220|Amd1|11702|S-adenosylmethionine decarboxylase 1
mm9_v1_chr2_+_158132228_158132404	0.511734	NFIX.p2	AK143562|Lbp|16803|lipopolysaccharide binding protein	NM_008489|Lbp|16803|lipopolysaccharide binding protein	X99347|Lbp|16803|lipopolysaccharide binding protein	BC004795|Lbp|16803|lipopolysaccharide binding protein	AK158105|Lbp|16803|lipopolysaccharide binding protein
mm9_v1_chr12_+_112812710_112812750	0.510841	NFIX.p2	AK083683|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	NM_021516|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	NM_022801|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	AK166157|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	AK132247|Mark3|17169|MAP/microtubule affinity-regulating kinase 3	BC066071|Mark3|17169|MAP/microtubule affinity-regulating kinase 3
mm9_v1_chr7_+_129276547_129276617	0.51055	NFIX.p2	AK076738|Dctn5|59288|dynactin 5	NM_021608|Dctn5|59288|dynactin 5	BC005671|Dctn5|59288|dynactin 5	AK010238|Dctn5|59288|dynactin 5	AK168983|Dctn5|59288|dynactin 5	AK076100|Dctn5|59288|dynactin 5	AK151193|Dctn5|59288|dynactin 5	AK151876|Dctn5|59288|dynactin 5	BC010834|Dctn5|59288|dynactin 5	BC092273|Dctn5|59288|dynactin 5	AK146123|Dctn5|59288|dynactin 5	AK145958|Dctn5|59288|dynactin 5	AF190795|Dctn5|59288|dynactin 5	AK051957|Dctn5|59288|dynactin 5
mm9_v1_chr12_-_70994089_70994191	0.51007	NFIX.p2	BC048173|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK045031|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	AK053775|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5	NM_201519|Map4k5|399510|mitogen-activated protein kinase kinase kinase kinase 5
mm9_v1_chr12_+_88488644_88488668	0.507468	NFIX.p2	BC031777|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)	NM_010363|Gstz1|14874|glutathione transferase zeta 1 (maleylacetoacetate isomerase)
mm9_v1_chr14_+_21895418_21895486	0.507467	NFIX.p2	AK160264|Adk|11534|adenosine kinase
mm9_v1_chr12_-_56922146_56922187	0.505082	NFIX.p2	AK046680|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	AY596972|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	AY596973|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	AY596974|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	NM_001003719|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	NM_001112714|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	NM_019994|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1
mm9_v1_chrX_-_148776674_148776969	0.503071	NFIX.p2	BC004006|Tspyl2|52808|TSPY-like 2	BC043694|Tspyl2|52808|TSPY-like 2	AY273809|Tspyl2|52808|TSPY-like 2	BC054393|Tspyl2|52808|TSPY-like 2	AK018700|Tspyl2|52808|TSPY-like 2
mm9_v1_chr2_+_72123858_72123894	0.497886	NFIX.p2	AK162819|B230120H23Rik|65964|RIKEN cDNA B230120H23 gene
mm9_v1_chr9_-_77956353_77956477	0.497569	NFIX.p2	AK018482|Fbxo9|71538|f-box protein 9	AB041585|Fbxo9|71538|f-box protein 9	BC020074|Fbxo9|71538|f-box protein 9	NM_023605|Fbxo9|71538|f-box protein 9
mm9_v1_chr7_+_108599740_108599766	0.496341	NFIX.p2	NM_001143849|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr11_-_60692261_60692327	0.496049	NFIX.p2	BC048514|Tmem11|216821|transmembrane protein 11
mm9_v1_chr3_+_145650833_145650943	0.495979	NFIX.p2	NM_001166064|Syde2|214804|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm9_v1_chr1_+_148344816_148344867	0.494384	NFIX.p2	NM_001145807|Fam5c|215378|family with sequence similarity 5, member C	AK083233|Fam5c|215378|family with sequence similarity 5, member C	BC030498|Fam5c|215378|family with sequence similarity 5, member C	AK140520|Fam5c|215378|family with sequence similarity 5, member C
mm9_v1_chr17_+_56219032_56219219	0.493341	NFIX.p2	AK144669|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	AK143616|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	D63850|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	NM_008233|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	AK146918|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	AK146813|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	BC003741|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2	FN687734|Hdgfrp2|15193|hepatoma-derived growth factor, related protein 2
mm9_v1_chr9_-_75458918_75458929	0.492922	NFIX.p2	AK018223|Tmod2|50876|tropomodulin 2
mm9_v1_chr12_+_3954950_3954950	0.487899	NFIX.p2	AK017492|Pomc|18976|pro-opiomelanocortin-alpha	AK017581|Pomc|18976|pro-opiomelanocortin-alpha	AK030714|Pomc|18976|pro-opiomelanocortin-alpha	AK077426|Pomc|18976|pro-opiomelanocortin-alpha	AK133592|Pomc|18976|pro-opiomelanocortin-alpha	AK133646|Pomc|18976|pro-opiomelanocortin-alpha	AK133740|Pomc|18976|pro-opiomelanocortin-alpha	AK133776|Pomc|18976|pro-opiomelanocortin-alpha	AK133800|Pomc|18976|pro-opiomelanocortin-alpha	BC061215|Pomc|18976|pro-opiomelanocortin-alpha	NM_008895|Pomc|18976|pro-opiomelanocortin-alpha
mm9_v1_chr1_-_184447549_184447745	0.484356	NFIX.p2	AF015038|Capn2|12334|calpain 2	AK150695|Capn2|12334|calpain 2	AK152094|Capn2|12334|calpain 2	AK152790|Capn2|12334|calpain 2	AK152994|Capn2|12334|calpain 2	AK052141|Capn2|12334|calpain 2	BC054726|Capn2|12334|calpain 2	NM_009794|Capn2|12334|calpain 2	AK154855|Capn2|12334|calpain 2	D38117|Capn2|12334|calpain 2	AK053832|Capn2|12334|calpain 2
mm9_v1_chr11_+_116976506_116976598	0.476515	NFIX.p2	BC005766|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	BC086620|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	AK004818|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	BC055849|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr5_-_114292851_114293254	0.470248	NFIX.p2	AK201602|Coro1c|23790|coronin, actin binding protein 1C
mm9_v1_chr15_-_78360039_78360054	0.469914	NFIX.p2	DQ002399|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	NM_028331|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	BC071187|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6	AK154407|C1qtnf6|72709|C1q and tumor necrosis factor related protein 6
mm9_v1_chr2_-_136716832_136716934	0.469269	NFIX.p2	AK008160|Mkks|59030|McKusick-Kaufman syndrome protein	AK008406|Mkks|59030|McKusick-Kaufman syndrome protein	BC024359|Mkks|59030|McKusick-Kaufman syndrome protein	AK004987|Mkks|59030|McKusick-Kaufman syndrome protein	BC100336|Mkks|59030|McKusick-Kaufman syndrome protein	AK032528|Mkks|59030|McKusick-Kaufman syndrome protein	AK032554|Mkks|59030|McKusick-Kaufman syndrome protein	AF254074|Mkks|59030|McKusick-Kaufman syndrome protein
mm9_v1_chr8_+_125897631_125897921	0.468106	NFIX.p2	BC046768|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	NM_025804|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK045397|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK050274|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK148082|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK003180|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK088360|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	NM_001037878|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK089964|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK150232|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK150918|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK151558|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK161627|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	NM_001037877|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK150942|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK151143|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK152178|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK152494|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK167837|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK168167|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	BC016130|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	BC025071|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	U94988|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK122430|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK075728|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	EU624323|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)	AK013754|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)
mm9_v1_chr2_-_32306938_32306989	0.466854	NFIX.p2	BC037109|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK132204|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK082756|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	AK049392|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_001164357|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	NM_146118|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr5_+_139899132_139899277	0.462543	NFIX.p2	AK030375|Gpr30|76854|G protein-coupled receptor 30	NM_029771|Gpr30|76854|G protein-coupled receptor 30	AK018203|Gpr30|76854|G protein-coupled receptor 30	BC138598|Gpr30|76854|G protein-coupled receptor 30	BC138616|Gpr30|76854|G protein-coupled receptor 30
mm9_v1_chr10_-_61802889_61803289	0.462137	NFIX.p2	AK167468|Hk1|15275|hexokinase 1	AK143630|Hk1|15275|hexokinase 1	NM_001146100|Hk1|15275|hexokinase 1	BC072628|Hk1|15275|hexokinase 1
mm9_v1_chr5_-_52957343_52957374	0.45993	NFIX.p2	AY841361|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr2_-_154900132_154900153	0.458412	NFIX.p2	L32836|Ahcy|269378|S-adenosylhomocysteine hydrolase
mm9_v1_chr6_+_90554873_90554957	0.45396	NFIX.p2	NM_027868|Slc41a3|71699|solute carrier family 41, member 3	BC011108|Slc41a3|71699|solute carrier family 41, member 3
mm9_v1_chr3_+_32635972_32635987	0.453576	NFIX.p2	AK088061|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5	AK018562|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5	AK002279|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5	AK005521|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5	AK013223|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5	AK004372|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5	NM_025316|Ndufb5|66046|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5
mm9_v1_chr11_-_119089774_119089812	0.452257	NFIX.p2	BC057634|Tbc1d16|207592|TBC1 domain family, member 16	AK047555|Tbc1d16|207592|TBC1 domain family, member 16	NM_172443|Tbc1d16|207592|TBC1 domain family, member 16
mm9_v1_chr10_-_75395207_75395224	0.452024	NFIX.p2	NM_008606|Mmp11|17385|matrix metallopeptidase 11	Z12604|Mmp11|17385|matrix metallopeptidase 11	BC052854|Mmp11|17385|matrix metallopeptidase 11	AK142169|Mmp11|17385|matrix metallopeptidase 11	AK165778|Mmp11|17385|matrix metallopeptidase 11
mm9_v1_chr12_+_114214947_114214965	0.445928	NFIX.p2	AK146991|Btbd6|399566|BTB (POZ) domain containing 6
mm9_v1_chr15_-_74828317_74828336	0.445678	NFIX.p2	BC002070|Ly6a|110454|lymphocyte antigen 6 complex, locus A	NM_010738|Ly6a|110454|lymphocyte antigen 6 complex, locus A	X04653|Ly6a|110454|lymphocyte antigen 6 complex, locus A	J03636|Ly6a|110454|lymphocyte antigen 6 complex, locus A	AK076200|Ly6a|110454|lymphocyte antigen 6 complex, locus A
mm9_v1_chr13_+_13529932_13529933	0.442577	NFIX.p2	AK166779|Nid1|18073|nidogen 1	AK041633|Nid1|18073|nidogen 1	AK049585|Nid1|18073|nidogen 1
mm9_v1_chr2_-_154384574_154384627	0.442315	NFIX.p2	AK044296|Necab3|56846|N-terminal EF-hand calcium binding protein 3	AK013520|Necab3|56846|N-terminal EF-hand calcium binding protein 3	AK158225|Necab3|56846|N-terminal EF-hand calcium binding protein 3	NM_021546|Necab3|56846|N-terminal EF-hand calcium binding protein 3
mm9_v1_chr9_-_64101354_64101425	0.441452	NFIX.p2	AK167336|Map2k1|26395|mitogen-activated protein kinase kinase 1	AB041567|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146233|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146931|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK165894|Map2k1|26395|mitogen-activated protein kinase kinase 1	NM_008927|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr1_+_94803538_94803618	0.435202	NFIX.p2	AK163560|Dusp28|67446|dual specificity phosphatase 28	AK002934|Dusp28|67446|dual specificity phosphatase 28	NM_175118|Dusp28|67446|dual specificity phosphatase 28	BC119127|Dusp28|67446|dual specificity phosphatase 28	BC051598|Dusp28|67446|dual specificity phosphatase 28	AK088940|Dusp28|67446|dual specificity phosphatase 28
mm9_v1_chr18_+_66033139_66033147	0.434703	NFIX.p2	AK139345|Grp|225642|gastrin releasing peptide	AK133508|Grp|225642|gastrin releasing peptide	BC024515|Grp|225642|gastrin releasing peptide	NM_175012|Grp|225642|gastrin releasing peptide
mm9_v1_chr5_+_143178045_143178121	0.434002	NFIX.p2	NM_146257|Slc29a4|243328|solute carrier family 29 (nucleoside transporters), member 4	BC025599|Slc29a4|243328|solute carrier family 29 (nucleoside transporters), member 4
mm9_v1_chr14_-_37781899_37781902	0.432931	NFIX.p2	AK013689|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr6_-_113451922_113451926	0.430292	NFIX.p2	AK031947|Prrt3|210673|proline-rich transmembrane protein 3
mm9_v1_chr8_+_11758322_11758364	0.429216	NFIX.p2	NM_001113518|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	NM_017402|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	BC044838|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AK052545|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)	AY220301|Arhgef7|54126|Rho guanine nucleotide exchange factor (GEF7)
mm9_v1_chr9_-_119066057_119066210	0.428301	NFIX.p2	AK160568|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	BC019882|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	AK145953|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	AY273812|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B	NM_146230|Acaa1b|235674|acetyl-Coenzyme A acyltransferase 1B
mm9_v1_chr3_-_105762117_105762217	0.428206	NFIX.p2	AK169634|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC089574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK162311|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK149176|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167626|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168590|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK081249|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK002960|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC049640|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK011312|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168028|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168041|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK019459|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK037892|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152253|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152829|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167480|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK169137|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK150730|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151250|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK158569|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK157544|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr8_-_41597015_41597116	0.425203	NFIX.p2	AK132063|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	BC006021|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK137838|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK147048|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK166449|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK007767|Cnot7|18983|CCR4-NOT transcription complex, subunit 7	AK009561|Cnot7|18983|CCR4-NOT transcription complex, subunit 7
mm9_v1_chr10_+_79422870_79422988	0.424869	NFIX.p2	AK087505|Wdr18|216156|WD repeat domain 18	AK133716|Wdr18|216156|WD repeat domain 18	BC095984|Wdr18|216156|WD repeat domain 18	NM_175450|Wdr18|216156|WD repeat domain 18	AK032251|Wdr18|216156|WD repeat domain 18	AK050106|Wdr18|216156|WD repeat domain 18	AK160713|Wdr18|216156|WD repeat domain 18	AK163465|Wdr18|216156|WD repeat domain 18	AK166113|Wdr18|216156|WD repeat domain 18	AK168691|Wdr18|216156|WD repeat domain 18	AK082695|Wdr18|216156|WD repeat domain 18
mm9_v1_chr17_-_49703661_49703689	0.424126	NFIX.p2	BC050043|Daam2|76441|dishevelled associated activator of morphogenesis 2	NM_001008231|Daam2|76441|dishevelled associated activator of morphogenesis 2	AY426536|Daam2|76441|dishevelled associated activator of morphogenesis 2
mm9_v1_chr11_-_23397927_23397986	0.424035	NFIX.p2	BC038397|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	BC052829|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK033696|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK093945|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	NM_172391|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK154196|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK155265|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)	AK137116|Ahsa2|268390|AHA1, activator of heat shock protein ATPase homolog 2 (yeast)
mm9_v1_chr1_+_193542261_193542399	0.423586	NFIX.p2	NM_001134829|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	AK172914|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1	BC013667|Lpgat1|226856|lysophosphatidylglycerol acyltransferase 1
mm9_v1_chr1_+_155756310_155756313	0.423142	NFIX.p2	AK146463|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK158643|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK159888|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)	AK152497|Glul|14645|glutamate-ammonia ligase (glutamine synthetase)
mm9_v1_chr1_-_154233721_154233811	0.421016	NFIX.p2	AK169429|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC024342|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK004261|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK053666|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK011608|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC145701|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK017650|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_025677|Tsen15|66637|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
mm9_v1_chr14_+_45949451_45949542	0.420921	NFIX.p2	AK012174|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC116752|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC119168|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	NM_025959|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK144728|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK014354|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC037099|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	AK166961|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC043044|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6	BC057997|Psmc6|67089|proteasome (prosome, macropain) 26S subunit, ATPase, 6
mm9_v1_chr14_-_37781912_37781927	0.420891	NFIX.p2	AK172153|Gcap14|72972|granule cell antiserum positive 14
mm9_v1_chr8_-_109417431_109417531	0.418712	NFIX.p2	AK030924|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK165993|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	NM_145412|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK087721|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK088257|Chtf8|214987|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
mm9_v1_chr2_+_102498839_102498845	0.417691	NFIX.p2	AK134609|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	NM_001077514|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2	AK140095|Slc1a2|20511|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm9_v1_chr8_-_81923268_81923340	0.417304	NFIX.p2	AK017583|Smad1|17125|MAD homolog 1 (Drosophila)	AK034045|Smad1|17125|MAD homolog 1 (Drosophila)	AK054104|Smad1|17125|MAD homolog 1 (Drosophila)
mm9_v1_chr17_-_25570566_25570712	0.415779	NFIX.p2	BC138026|Cacna1h|58226|calcium channel, voltage-dependent, T type, alpha 1H subunit	BC058206|Cacna1h|58226|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm9_v1_chr1_+_40323512_40323515	0.414833	NFIX.p2	AK048550|Il1r1|16177|interleukin 1 receptor, type I
mm9_v1_chr7_-_149088233_149088349	0.41481	NFIX.p2	AK049394|Tollip|54473|toll interacting protein	BC062139|Tollip|54473|toll interacting protein	AK045422|Tollip|54473|toll interacting protein	BC053515|Tollip|54473|toll interacting protein	AK161312|Tollip|54473|toll interacting protein	AJ242971|Tollip|54473|toll interacting protein	AK016482|Tollip|54473|toll interacting protein	NM_023764|Tollip|54473|toll interacting protein	AK078391|Tollip|54473|toll interacting protein	AK049263|Tollip|54473|toll interacting protein
mm9_v1_chr4_+_106584400_106584461	0.412003	NFIX.p2	AY167987|Ssbp3|72475|single-stranded DNA binding protein 3
mm9_v1_chr11_+_72974015_72974031	0.410888	NFIX.p2	AF333331|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5	BC138189|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5	BC145181|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5	NM_033321|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5
mm9_v1_chr16_+_95924069_95924179	0.409728	NFIX.p2	AK150175|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK014602|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005486|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	J04103|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	BC005504|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK145852|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr11_+_116976475_116976498	0.408779	NFIX.p2	AK047396|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166506|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_001166507|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)	NM_028777|Sec14l1|74136|SEC14-like 1 (S. cerevisiae)
mm9_v1_chr10_+_94039007_94039007	0.407878	NFIX.p2	NM_177026|Tmcc3|319880|transmembrane and coiled coil domains 3
mm9_v1_chrX_+_34414293_34414386	0.407537	NFIX.p2	AK163966|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AF089812|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AF383148|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK133723|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK160538|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK164074|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK160545|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	NM_019668|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK160527|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	BC026053|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK150417|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)	AK153327|Ube2a|22209|ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae)
mm9_v1_chr3_+_137286635_137286835	0.407501	NFIX.p2	AK018944|Ddit4l|73284|DNA-damage-inducible transcript 4-like	NM_030143|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK006617|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AK053333|Ddit4l|73284|DNA-damage-inducible transcript 4-like	BC038131|Ddit4l|73284|DNA-damage-inducible transcript 4-like	AF335325|Ddit4l|73284|DNA-damage-inducible transcript 4-like
mm9_v1_chr17_+_31523178_31523231	0.403427	NFIX.p2	NM_001163748|Pde9a|18585|phosphodiesterase 9A	NM_008804|Pde9a|18585|phosphodiesterase 9A	AK030509|Pde9a|18585|phosphodiesterase 9A	BC061163|Pde9a|18585|phosphodiesterase 9A	AK168143|Pde9a|18585|phosphodiesterase 9A	BC025882|Pde9a|18585|phosphodiesterase 9A	AF031147|Pde9a|18585|phosphodiesterase 9A	AF068247|Pde9a|18585|phosphodiesterase 9A	BC038675|Pde9a|18585|phosphodiesterase 9A	BC046915|Pde9a|18585|phosphodiesterase 9A
mm9_v1_chr18_+_77304212_77304557	0.402185	NFIX.p2	NM_001164168|Pias2|17344|protein inhibitor of activated STAT 2	NM_001164170|Pias2|17344|protein inhibitor of activated STAT 2	BC034711|Pias2|17344|protein inhibitor of activated STAT 2	BC005596|Pias2|17344|protein inhibitor of activated STAT 2
mm9_v1_chr3_+_138190223_138190257	0.400757	NFIX.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr7_-_117009158_117009192	0.399301	NFIX.p2	AK142950|Scube2|56788|signal peptide, CUB domain, EGF-like 2	NM_020052|Scube2|56788|signal peptide, CUB domain, EGF-like 2
mm9_v1_chr10_+_75931622_75931715	0.398417	NFIX.p2	AK122313|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AJ006590|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AK051901|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	BC052452|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	NM_019434|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
mm9_v1_chr15_-_10415578_10415691	0.398031	NFIX.p2	AK002985|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	BC014832|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	AK168325|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	AK088313|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	NM_026396|Brix1|67832|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm9_v1_chr3_+_87710417_87710583	0.397315	NFIX.p2	AK076021|Hdgf|15191|hepatoma-derived growth factor	AK005359|Hdgf|15191|hepatoma-derived growth factor	D63707|Hdgf|15191|hepatoma-derived growth factor	AK029475|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr19_+_47314809_47314814	0.397274	NFIX.p2	AK078529|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr12_-_13255934_13256032	0.394673	NFIX.p2	BC008570|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK166146|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK028341|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK053259|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK160982|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	BC010624|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	NM_134040|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK153335|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	AK132157|Ddx1|104721|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
mm9_v1_chr5_-_123271283_123271353	0.393473	NFIX.p2	AK147951|Anapc5|59008|anaphase-promoting complex subunit 5	BC046804|Anapc5|59008|anaphase-promoting complex subunit 5	AK075969|Anapc5|59008|anaphase-promoting complex subunit 5	AK159713|Anapc5|59008|anaphase-promoting complex subunit 5	AK159916|Anapc5|59008|anaphase-promoting complex subunit 5	AK167561|Anapc5|59008|anaphase-promoting complex subunit 5	AK168737|Anapc5|59008|anaphase-promoting complex subunit 5	AK168814|Anapc5|59008|anaphase-promoting complex subunit 5	AB041593|Anapc5|59008|anaphase-promoting complex subunit 5	AK151314|Anapc5|59008|anaphase-promoting complex subunit 5	AK151905|Anapc5|59008|anaphase-promoting complex subunit 5	AK152981|Anapc5|59008|anaphase-promoting complex subunit 5	AK153373|Anapc5|59008|anaphase-promoting complex subunit 5	AK153422|Anapc5|59008|anaphase-promoting complex subunit 5	AK159204|Anapc5|59008|anaphase-promoting complex subunit 5	AK148679|Anapc5|59008|anaphase-promoting complex subunit 5	AK049719|Anapc5|59008|anaphase-promoting complex subunit 5	AK169196|Anapc5|59008|anaphase-promoting complex subunit 5	AK088327|Anapc5|59008|anaphase-promoting complex subunit 5	NM_001042491|Anapc5|59008|anaphase-promoting complex subunit 5	NM_021505|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr14_-_70605828_70605932	0.38944	NFIX.p2	AB190911|Sorbs3|20410|sorbin and SH3 domain containing 3
mm9_v1_chr15_-_83000931_83000939	0.387467	NFIX.p2	AK010858|Cyb5r3|109754|cytochrome b5 reductase 3
mm9_v1_chr2_-_152158370_152158374	0.384761	NFIX.p2	BC034555|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1	NM_019705|Rbck1|24105|RanBP-type and C3HC4-type zinc finger containing 1
mm9_v1_chr6_+_113421448_113421463	0.384758	NFIX.p2	NM_134159|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr11_-_60166405_60166439	0.383596	NFIX.p2	AK166040|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039092|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_001039093|Tom1l2|216810|target of myb1-like 2 (chicken)	NM_153080|Tom1l2|216810|target of myb1-like 2 (chicken)
mm9_v1_chr11_+_72264668_72264732	0.382451	NFIX.p2	AK196252|Mybbp1a|18432|MYB binding protein (P160) 1a	AK190076|Mybbp1a|18432|MYB binding protein (P160) 1a	AK194300|Mybbp1a|18432|MYB binding protein (P160) 1a
mm9_v1_chr4_-_118162354_118162375	0.380434	NFIX.p2	X71425|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X73960|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC057004|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC060182|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK052192|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK161898|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC046452|Tie1|21846|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm9_v1_chr12_+_114252715_114252763	0.379047	NFIX.p2	NM_001081170|Pacs2|217893|phosphofurin acidic cluster sorting protein 2	AK036581|Pacs2|217893|phosphofurin acidic cluster sorting protein 2	AK054000|Pacs2|217893|phosphofurin acidic cluster sorting protein 2
mm9_v1_chr13_-_59658585_59658681	0.378923	NFIX.p2	BC060633|Agtpbp1|67269|ATP/GTP binding protein 1	AK133215|Agtpbp1|67269|ATP/GTP binding protein 1	AF219141|Agtpbp1|67269|ATP/GTP binding protein 1	AK132695|Agtpbp1|67269|ATP/GTP binding protein 1	AK170046|Agtpbp1|67269|ATP/GTP binding protein 1	AK051467|Agtpbp1|67269|ATP/GTP binding protein 1	BC048468|Agtpbp1|67269|ATP/GTP binding protein 1	AK015394|Agtpbp1|67269|ATP/GTP binding protein 1	NM_001048008|Agtpbp1|67269|ATP/GTP binding protein 1	NM_023328|Agtpbp1|67269|ATP/GTP binding protein 1
mm9_v1_chr17_-_56175896_56176097	0.377264	NFIX.p2	AK162715|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138602|Sh3gl1|20405|SH3-domain GRB2-like 1	BC138603|Sh3gl1|20405|SH3-domain GRB2-like 1	BC145345|Sh3gl1|20405|SH3-domain GRB2-like 1	NM_013664|Sh3gl1|20405|SH3-domain GRB2-like 1	U58885|Sh3gl1|20405|SH3-domain GRB2-like 1	AK167505|Sh3gl1|20405|SH3-domain GRB2-like 1	AK154836|Sh3gl1|20405|SH3-domain GRB2-like 1
mm9_v1_chr2_+_90687308_90687523	0.376813	NFIX.p2	AK008712|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	NM_019758|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC028929|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK016000|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK011814|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC038899|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC038916|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK162807|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AF176009|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	BC065145|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK164169|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK011874|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK151553|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK008487|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK161441|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK007757|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK008463|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK011785|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK075890|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK003100|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK184198|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK215565|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)	AK217615|Mtch2|56428|mitochondrial carrier homolog 2 (C. elegans)
mm9_v1_chr10_+_80720191_80720236	0.376089	NFIX.p2	AK018182|Matk|17179|megakaryocyte-associated tyrosine kinase	AK013606|Matk|17179|megakaryocyte-associated tyrosine kinase	S77473|Matk|17179|megakaryocyte-associated tyrosine kinase
mm9_v1_chr4_+_53453302_53453555	0.375681	NFIX.p2	AY249865|Slc44a1|100434|solute carrier family 44, member 1	BC113167|Slc44a1|100434|solute carrier family 44, member 1	BC113169|Slc44a1|100434|solute carrier family 44, member 1	AY249866|Slc44a1|100434|solute carrier family 44, member 1
mm9_v1_chr9_-_64101429_64101455	0.373333	NFIX.p2	AK154793|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr2_-_26244834_26244836	0.372257	NFIX.p2	NM_001085407|Sdccag3|68112|serologically defined colon cancer antigen 3	NM_001085408|Sdccag3|68112|serologically defined colon cancer antigen 3	NM_026563|Sdccag3|68112|serologically defined colon cancer antigen 3
mm9_v1_chr19_+_32694494_32694583	0.371994	NFIX.p2	AK128962|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	BC090997|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	NM_011864|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF052453|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2	AF085144|Papss2|23972|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm9_v1_chr10_-_13588578_13588812	0.371277	NFIX.p2	AK008210|Aig1|66253|androgen-induced 1	NM_025446|Aig1|66253|androgen-induced 1	AK162306|Aig1|66253|androgen-induced 1	AK005332|Aig1|66253|androgen-induced 1	AK084050|Aig1|66253|androgen-induced 1	BC035305|Aig1|66253|androgen-induced 1
mm9_v1_chr17_+_74888823_74888973	0.370844	NFIX.p2	AK166347|Yipf4|67864|Yip1 domain family, member 4	AK009618|Yipf4|67864|Yip1 domain family, member 4	AK083301|Yipf4|67864|Yip1 domain family, member 4	NM_026417|Yipf4|67864|Yip1 domain family, member 4	AK017721|Yipf4|67864|Yip1 domain family, member 4	AK017722|Yipf4|67864|Yip1 domain family, member 4	AK159227|Yipf4|67864|Yip1 domain family, member 4	BC003936|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr16_+_21423190_21423247	0.37071	NFIX.p2	NM_001081366|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)	AK122375|Vps8|209018|vacuolar protein sorting 8 homolog (S. cerevisiae)
mm9_v1_chr11_-_17111513_17111579	0.369714	NFIX.p2	AK165942|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK007324|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009146|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK009896|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK017153|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	BC020037|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AF349950|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)
mm9_v1_chr6_+_113421480_113421500	0.369695	NFIX.p2	BC004759|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chrX_+_103382432_103382595	0.369547	NFIX.p2	NM_008828|Pgk1|18655|phosphoglycerate kinase 1	AK145846|Pgk1|18655|phosphoglycerate kinase 1	AK133877|Pgk1|18655|phosphoglycerate kinase 1	AK164440|Pgk1|18655|phosphoglycerate kinase 1	BC108372|Pgk1|18655|phosphoglycerate kinase 1	BC023819|Pgk1|18655|phosphoglycerate kinase 1	BC032167|Pgk1|18655|phosphoglycerate kinase 1	AK167441|Pgk1|18655|phosphoglycerate kinase 1	AK167459|Pgk1|18655|phosphoglycerate kinase 1	AK167710|Pgk1|18655|phosphoglycerate kinase 1	BC083355|Pgk1|18655|phosphoglycerate kinase 1	M15668|Pgk1|18655|phosphoglycerate kinase 1	EF437325|Pgk1|18655|phosphoglycerate kinase 1
mm9_v1_chr13_-_69750195_69750231	0.365493	NFIX.p2	BC115468|Srd5a1|78925|steroid 5 alpha-reductase 1	BC115469|Srd5a1|78925|steroid 5 alpha-reductase 1	AK082819|Srd5a1|78925|steroid 5 alpha-reductase 1
mm9_v1_chr2_-_103637795_103637829	0.362976	NFIX.p2	NM_001111291|Caprin1|53872|cell cycle associated protein 1	NM_016739|Caprin1|53872|cell cycle associated protein 1
mm9_v1_chr3_-_40650624_40650795	0.361424	NFIX.p2	BC010483|Mfsd8|72175|major facilitator superfamily domain containing 8	AK013144|Mfsd8|72175|major facilitator superfamily domain containing 8	BC113183|Mfsd8|72175|major facilitator superfamily domain containing 8	BC113790|Mfsd8|72175|major facilitator superfamily domain containing 8	AK035291|Mfsd8|72175|major facilitator superfamily domain containing 8	AK077957|Mfsd8|72175|major facilitator superfamily domain containing 8	NM_028140|Mfsd8|72175|major facilitator superfamily domain containing 8	AK032080|Mfsd8|72175|major facilitator superfamily domain containing 8
mm9_v1_chr7_+_128877968_128878020	0.355803	NFIX.p2	BC021338|Scnn1g|20278|sodium channel, nonvoltage-gated 1 gamma	AF112187|Scnn1g|20278|sodium channel, nonvoltage-gated 1 gamma	NM_011326|Scnn1g|20278|sodium channel, nonvoltage-gated 1 gamma
mm9_v1_chr16_+_4939100_4939137	0.3553	NFIX.p2	AK003241|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	NM_025839|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AK019936|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AK007897|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	BC028494|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AK002378|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AK159841|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	AF435792|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	BC025569|Nudt16l1|66911|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
mm9_v1_chr9_-_95745663_95745697	0.353557	NFIX.p2	AK133070|Pls1|102502|plastin 1 (I-isoform)	NM_001033210|Pls1|102502|plastin 1 (I-isoform)
mm9_v1_chr2_+_155207581_155207616	0.350981	NFIX.p2	AJ297793|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK146589|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	BC043086|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	NM_178111|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2	AK149495|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr11_-_109472695_109472714	0.349213	NFIX.p2	NM_145940|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK031672|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK045131|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	AK050495|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1
mm9_v1_chr4_-_115690068_115690125	0.348943	NFIX.p2	AK138481|Faah|14073|fatty acid amide hydrolase
mm9_v1_chr8_+_114535301_114535369	0.34593	NFIX.p2	AK047222|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK087729|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK165074|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AB041559|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK053864|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK081557|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK163044|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AB041557|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK084563|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK041613|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	AK051818|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein	BC012270|Terf2ip|57321|telomeric repeat binding factor 2, interacting protein
mm9_v1_chr11_+_78279202_78279242	0.344221	NFIX.p2	NM_026740|Slc46a1|52466|solute carrier family 46, member 1	AK170505|Slc46a1|52466|solute carrier family 46, member 1	BC057976|Slc46a1|52466|solute carrier family 46, member 1	AK003278|Slc46a1|52466|solute carrier family 46, member 1	AK220201|Slc46a1|52466|solute carrier family 46, member 1
mm9_v1_chr11_-_96805294_96805332	0.343739	NFIX.p2	BC026564|Pnpo|103711|pyridoxine 5'-phosphate oxidase	AK164667|Pnpo|103711|pyridoxine 5'-phosphate oxidase	NM_134021|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr9_+_123276054_123276170	0.342784	NFIX.p2	AK037012|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	AJ428066|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	NM_153168|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	AK053667|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC053916|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC138206|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC145982|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC111892|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC112412|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	AK045640|Lars2|102436|leucyl-tRNA synthetase, mitochondrial	BC080303|Lars2|102436|leucyl-tRNA synthetase, mitochondrial
mm9_v1_chr10_-_81063566_81063644	0.342044	NFIX.p2	BC023315|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)	AK135768|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)	AF145957|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)	NM_053254|Tle6|114606|transducin-like enhancer of split 6, homolog of Drosophila E(spl)
mm9_v1_chr14_+_31815002_31815071	0.338503	NFIX.p2	AK160461|Glt8d1|76485|glycosyltransferase 8 domain containing 1	BC069873|Glt8d1|76485|glycosyltransferase 8 domain containing 1
mm9_v1_chr2_+_25127985_25128074	0.336498	NFIX.p2	NM_175300|Anapc2|99152|anaphase promoting complex subunit 2	AK033784|Anapc2|99152|anaphase promoting complex subunit 2	BC137583|Anapc2|99152|anaphase promoting complex subunit 2	AK154465|Anapc2|99152|anaphase promoting complex subunit 2	AK170676|Anapc2|99152|anaphase promoting complex subunit 2	BC096381|Anapc2|99152|anaphase promoting complex subunit 2	AK129351|Anapc2|99152|anaphase promoting complex subunit 2	BC027351|Anapc2|99152|anaphase promoting complex subunit 2
mm9_v1_chr12_+_96933566_96933571	0.336431	NFIX.p2	AK140831|Flrt2|399558|fibronectin leucine rich transmembrane protein 2
mm9_v1_chr10_-_99949933_99949987	0.335277	NFIX.p2	AK044857|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK149759|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK158192|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	AK165838|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	NM_001033332|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3	NM_001110013|Tmtc3|237500|transmembrane and tetratricopeptide repeat containing 3
mm9_v1_chr18_-_6241341_6241371	0.333803	NFIX.p2	U86090|Kif5b|16573|kinesin family member 5B
mm9_v1_chr16_+_91225794_91225820	0.333605	NFIX.p2	BC051967|Olig2|50913|oligodendrocyte transcription factor 2	NM_016967|Olig2|50913|oligodendrocyte transcription factor 2	AB038697|Olig2|50913|oligodendrocyte transcription factor 2	AK080615|Olig2|50913|oligodendrocyte transcription factor 2
mm9_v1_chr14_-_122864879_122864880	0.332487	NFIX.p2	NM_022987|Zic5|65100|zinc finger protein of the cerebellum 5	AB042155|Zic5|65100|zinc finger protein of the cerebellum 5
mm9_v1_chr8_+_108384479_108384590	0.332345	NFIX.p2	BC083165|Nutf2|68051|nuclear transport factor 2	AK152212|Nutf2|68051|nuclear transport factor 2	BC003955|Nutf2|68051|nuclear transport factor 2	NM_026532|Nutf2|68051|nuclear transport factor 2	AK020512|Nutf2|68051|nuclear transport factor 2	AK028410|Nutf2|68051|nuclear transport factor 2	AK002461|Nutf2|68051|nuclear transport factor 2	AK012500|Nutf2|68051|nuclear transport factor 2	AK051049|Nutf2|68051|nuclear transport factor 2	AK168026|Nutf2|68051|nuclear transport factor 2	BC086773|Nutf2|68051|nuclear transport factor 2
mm9_v1_chr7_+_108599819_108599861	0.331849	NFIX.p2	AK158354|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK172397|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK170573|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated	AK170395|Pde2a|207728|phosphodiesterase 2A, cGMP-stimulated
mm9_v1_chr17_-_26645284_26645349	0.331698	NFIX.p2	AK149915|Dusp1|19252|dual specificity phosphatase 1	AK159726|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr9_+_118620809_118620817	0.330607	NFIX.p2	NM_001113514|Itga9|104099|integrin alpha 9	AK139690|Itga9|104099|integrin alpha 9
mm9_v1_chr5_-_92471603_92471743	0.324045	NFIX.p2	AK145688|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK139820|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AK030598|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)	AB029067|Cdkl2|53886|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm9_v1_chr14_-_52640348_52640407	0.318074	NFIX.p2	BC096486|Zfp219|69890|zinc finger protein 219	AB063578|Zfp219|69890|zinc finger protein 219	NM_027248|Zfp219|69890|zinc finger protein 219
mm9_v1_chr12_-_85958287_85958415	0.31699	NFIX.p2	AJ001166|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	AK028420|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	BC050102|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	NM_008992|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4
mm9_v1_chr14_+_35124004_35124021	0.315954	NFIX.p2	AK075971|Glud1|14661|glutamate dehydrogenase 1	X57024|Glud1|14661|glutamate dehydrogenase 1	AK089152|Glud1|14661|glutamate dehydrogenase 1
mm9_v1_chr16_+_17797405_17797532	0.315888	NFIX.p2	AB024432|Scarf2|224024|scavenger receptor class F, member 2	AK142378|Scarf2|224024|scavenger receptor class F, member 2	BC139758|Scarf2|224024|scavenger receptor class F, member 2	BC059226|Scarf2|224024|scavenger receptor class F, member 2	BC060084|Scarf2|224024|scavenger receptor class F, member 2	AK143208|Scarf2|224024|scavenger receptor class F, member 2
mm9_v1_chr5_+_137384005_137384101	0.313503	NFIX.p2	AK160464|Rabl5|67286|RAB, member of RAS oncogene family-like 5	BC009150|Rabl5|67286|RAB, member of RAS oncogene family-like 5	NM_026073|Rabl5|67286|RAB, member of RAS oncogene family-like 5	AK005820|Rabl5|67286|RAB, member of RAS oncogene family-like 5
mm9_v1_chr11_+_6191622_6191675	0.312941	NFIX.p2	AK150009|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK220536|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK008811|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	BC061232|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK201619|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK204071|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	BC057354|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)	AK088582|Ogdh|18293|oxoglutarate dehydrogenase (lipoamide)
mm9_v1_chr11_-_58615400_58615517	0.311531	NFIX.p2	FJ468008|Fam183b|75429|family with sequence similarity 183, member B	BC094630|Fam183b|75429|family with sequence similarity 183, member B	BC061254|Fam183b|75429|family with sequence similarity 183, member B	BC048748|Fam183b|75429|family with sequence similarity 183, member B	AK157972|Fam183b|75429|family with sequence similarity 183, member B	AK013920|Fam183b|75429|family with sequence similarity 183, member B	NM_001162878|Fam183b|75429|family with sequence similarity 183, member B	NM_029283|Fam183b|75429|family with sequence similarity 183, member B	BC126964|Fam183b|75429|family with sequence similarity 183, member B	BC117741|Fam183b|75429|family with sequence similarity 183, member B
mm9_v1_chr6_-_83486194_83486260	0.310573	NFIX.p2	AK146631|Actg2|11468|actin, gamma 2, smooth muscle, enteric	AK168649|Actg2|11468|actin, gamma 2, smooth muscle, enteric	BC002042|Actg2|11468|actin, gamma 2, smooth muscle, enteric	NM_009610|Actg2|11468|actin, gamma 2, smooth muscle, enteric
mm9_v1_chr1_+_40323430_40323476	0.309899	NFIX.p2	AK054137|Il1r1|16177|interleukin 1 receptor, type I	NM_001123382|Il1r1|16177|interleukin 1 receptor, type I
mm9_v1_chr11_+_100181296_100181331	0.308165	NFIX.p2	AK150813|Eif1|20918|eukaryotic translation initiation factor 1	AK151575|Eif1|20918|eukaryotic translation initiation factor 1	AK152194|Eif1|20918|eukaryotic translation initiation factor 1	AK169763|Eif1|20918|eukaryotic translation initiation factor 1	AK148032|Eif1|20918|eukaryotic translation initiation factor 1	AK151070|Eif1|20918|eukaryotic translation initiation factor 1	BC003463|Eif1|20918|eukaryotic translation initiation factor 1	NM_011508|Eif1|20918|eukaryotic translation initiation factor 1	BC081429|Eif1|20918|eukaryotic translation initiation factor 1	AF129888|Eif1|20918|eukaryotic translation initiation factor 1	BC010791|Eif1|20918|eukaryotic translation initiation factor 1	BC096691|Eif1|20918|eukaryotic translation initiation factor 1	BC096656|Eif1|20918|eukaryotic translation initiation factor 1
mm9_v1_chr10_-_8238569_8238650	0.305931	NFIX.p2	AK086181|Ust|338362|uronyl-2-sulfotransferase	AK147850|Ust|338362|uronyl-2-sulfotransferase	NM_177387|Ust|338362|uronyl-2-sulfotransferase
mm9_v1_chr4_+_49644923_49645030	0.305499	NFIX.p2	NM_001163263|Rnf20|109331|ring finger protein 20	NM_182999|Rnf20|109331|ring finger protein 20	AK053783|Rnf20|109331|ring finger protein 20	AK085436|Rnf20|109331|ring finger protein 20	AK139883|Rnf20|109331|ring finger protein 20	AK048862|Rnf20|109331|ring finger protein 20	AK051278|Rnf20|109331|ring finger protein 20	BC052482|Rnf20|109331|ring finger protein 20	AK087860|Rnf20|109331|ring finger protein 20	AK220492|Rnf20|109331|ring finger protein 20	AK082529|Rnf20|109331|ring finger protein 20
mm9_v1_chr10_+_18564932_18564972	0.305282	NFIX.p2	AK003734|Perp|64058|PERP, TP53 apoptosis effector	AK009190|Perp|64058|PERP, TP53 apoptosis effector	AK009184|Perp|64058|PERP, TP53 apoptosis effector	BC021772|Perp|64058|PERP, TP53 apoptosis effector
mm9_v1_chr13_+_56805028_56805028	0.304795	NFIX.p2	AK082997|Smad5|17129|MAD homolog 5 (Drosophila)	NM_001164042|Smad5|17129|MAD homolog 5 (Drosophila)
mm9_v1_chr18_+_74938827_74938895	0.304184	NFIX.p2	AK146007|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK050101|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK167567|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK169359|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	NM_177470|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK167715|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	AK002555|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	BC028901|Acaa2|52538|acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)
mm9_v1_chr12_+_17697604_17697620	0.303605	NFIX.p2	NM_016677|Hpcal1|53602|hippocalcin-like 1
mm9_v1_chr11_+_4060345_4060409	0.302508	NFIX.p2	NM_026175|Sf3a1|67465|splicing factor 3a, subunit 1	AK051703|Sf3a1|67465|splicing factor 3a, subunit 1	AK030223|Sf3a1|67465|splicing factor 3a, subunit 1	AK004763|Sf3a1|67465|splicing factor 3a, subunit 1	AK160061|Sf3a1|67465|splicing factor 3a, subunit 1	AK134178|Sf3a1|67465|splicing factor 3a, subunit 1	AK029095|Sf3a1|67465|splicing factor 3a, subunit 1	BC029753|Sf3a1|67465|splicing factor 3a, subunit 1	AK028829|Sf3a1|67465|splicing factor 3a, subunit 1
mm9_v1_chr9_-_44773594_44773682	0.302355	NFIX.p2	BC025043|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028721|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC006649|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	BC021406|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK028850|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	AK172893|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)	NM_145400|Ube4a|140630|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)
mm9_v1_chr2_-_171868868_171868965	0.300334	NFIX.p2	BC094540|Cbln4|228942|cerebellin 4 precursor protein	AK032621|Cbln4|228942|cerebellin 4 precursor protein	NM_175631|Cbln4|228942|cerebellin 4 precursor protein
mm9_v1_chr11_+_72263260_72263300	0.299013	NFIX.p2	
mm9_v1_chr2_+_90725895_90726123	0.296504	NFIX.p2	NM_026161|C1qtnf4|67445|C1q and tumor necrosis factor related protein 4	BC087832|C1qtnf4|67445|C1q and tumor necrosis factor related protein 4	AK002948|C1qtnf4|67445|C1q and tumor necrosis factor related protein 4	BC027315|C1qtnf4|67445|C1q and tumor necrosis factor related protein 4
mm9_v1_chr1_-_82583298_82583393	0.292887	NFIX.p2	AK142553|Col4a4|12829|collagen, type IV, alpha 4	AF169388|Col4a4|12829|collagen, type IV, alpha 4
mm9_v1_chr12_-_27100112_27100136	0.291472	NFIX.p2	AF360998|Rnf144a|108089|ring finger protein 144A	NM_001081977|Rnf144a|108089|ring finger protein 144A	NM_080563|Rnf144a|108089|ring finger protein 144A
mm9_v1_chr15_-_94234778_94234782	0.289656	NFIX.p2	AK145288|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_001164785|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_001164786|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20	NM_177431|Adamts20|223838|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm9_v1_chr8_-_73000776_73000872	0.285311	NFIX.p2	AK189302|Klhl26|234378|kelch-like 26 (Drosophila)	AK182438|Klhl26|234378|kelch-like 26 (Drosophila)	AK048601|Klhl26|234378|kelch-like 26 (Drosophila)	BC098185|Klhl26|234378|kelch-like 26 (Drosophila)	AK163170|Klhl26|234378|kelch-like 26 (Drosophila)	AK049946|Klhl26|234378|kelch-like 26 (Drosophila)	NM_001122830|Klhl26|234378|kelch-like 26 (Drosophila)	NM_178771|Klhl26|234378|kelch-like 26 (Drosophila)	AK041089|Klhl26|234378|kelch-like 26 (Drosophila)	BC025484|Klhl26|234378|kelch-like 26 (Drosophila)	AK036321|Klhl26|234378|kelch-like 26 (Drosophila)
mm9_v1_chr7_+_25669603_25669732	0.283539	NFIX.p2	AK013524|Rps19|20085|ribosomal protein S19	AK031403|Rps19|20085|ribosomal protein S19	BC086938|Rps19|20085|ribosomal protein S19	AK012052|Rps19|20085|ribosomal protein S19	AK028244|Rps19|20085|ribosomal protein S19	BC034506|Rps19|20085|ribosomal protein S19	AK018725|Rps19|20085|ribosomal protein S19	NM_023133|Rps19|20085|ribosomal protein S19
mm9_v1_chr16_-_10543121_10543218	0.282847	NFIX.p2	BC017551|Dexi|58239|dexamethasone-induced transcript	AK007644|Dexi|58239|dexamethasone-induced transcript	AK032104|Dexi|58239|dexamethasone-induced transcript	NM_021428|Dexi|58239|dexamethasone-induced transcript
mm9_v1_chr15_+_38591604_38591751	0.282475	NFIX.p2	NM_025494|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK075779|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK129007|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK151237|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK006323|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AK168914|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	BC010217|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	AB088407|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1	U13839|Atp6v1c1|66335|ATPase, H+ transporting, lysosomal V1 subunit C1
mm9_v1_chr3_+_30894668_30894897	0.28228	NFIX.p2	AK220517|Prkci|18759|protein kinase C, iota	AK144979|Prkci|18759|protein kinase C, iota	NM_008857|Prkci|18759|protein kinase C, iota	AK147710|Prkci|18759|protein kinase C, iota	AK167411|Prkci|18759|protein kinase C, iota	BC021630|Prkci|18759|protein kinase C, iota	D28577|Prkci|18759|protein kinase C, iota
mm9_v1_chr19_+_53384990_53385011	0.282169	NFIX.p2	NM_001008542|Mxi1|17859|Max interacting protein 1	AK154538|Mxi1|17859|Max interacting protein 1	BC064453|Mxi1|17859|Max interacting protein 1
mm9_v1_chr10_-_76880955_76880972	0.27893	NFIX.p2	BC051107|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AF403106|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AF403107|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AF403108|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AF403109|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AF525421|Adarb1|110532|adenosine deaminase, RNA-specific, B1	AY162454|Adarb1|110532|adenosine deaminase, RNA-specific, B1	BC062806|Adarb1|110532|adenosine deaminase, RNA-specific, B1
mm9_v1_chr14_-_52935887_52935914	0.278224	NFIX.p2	AK077601|Sall2|50524|sal-like 2 (Drosophila)
mm9_v1_chr6_+_29685467_29685542	0.277033	NFIX.p2	NM_176996|Smo|319757|smoothened homolog (Drosophila)	AK053699|Smo|319757|smoothened homolog (Drosophila)	AK053708|Smo|319757|smoothened homolog (Drosophila)
mm9_v1_chr4_+_87740516_87740554	0.276277	NFIX.p2	NM_001081184|BC057079|230393|cDNA sequence BC057079	AK164030|BC057079|230393|cDNA sequence BC057079
mm9_v1_chr18_-_80348125_80348161	0.275689	NFIX.p2	BC044898|Adnp2|240442|ADNP homeobox 2	BC047352|Adnp2|240442|ADNP homeobox 2
mm9_v1_chr11_-_96805259_96805283	0.273822	NFIX.p2	BC010785|Pnpo|103711|pyridoxine 5'-phosphate oxidase	AK154004|Pnpo|103711|pyridoxine 5'-phosphate oxidase
mm9_v1_chr6_-_142519807_142519890	0.272583	NFIX.p2	D88159|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	AK156346|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	NM_008428|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8	AK031777|Kcnj8|16523|potassium inwardly-rectifying channel, subfamily J, member 8
mm9_v1_chr11_-_96678887_96679011	0.272359	NFIX.p2	AK193504|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AK201206|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr16_+_95924061_95924067	0.27147	NFIX.p2	AK128933|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK152750|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK143687|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK144974|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK151315|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153339|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK153478|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr17_-_27650285_27650347	0.270916	NFIX.p2	BC072635|Grm4|268934|glutamate receptor, metabotropic 4
mm9_v1_chr15_-_88953516_88953579	0.270759	NFIX.p2	AK052441|Tubgcp6|328580|tubulin, gamma complex associated protein 6	AK129420|Tubgcp6|328580|tubulin, gamma complex associated protein 6	NM_001163319|Tubgcp6|328580|tubulin, gamma complex associated protein 6
mm9_v1_chr7_-_139768035_139768106	0.270372	NFIX.p2	AK128914|Oat|18242|ornithine aminotransferase	AK145877|Oat|18242|ornithine aminotransferase	NM_016978|Oat|18242|ornithine aminotransferase
mm9_v1_chr16_+_31948631_31948724	0.269339	NFIX.p2	NM_026554|Ncbp2|68092|nuclear cap binding protein subunit 2	AK008980|Ncbp2|68092|nuclear cap binding protein subunit 2	AK078181|Ncbp2|68092|nuclear cap binding protein subunit 2	AK147027|Ncbp2|68092|nuclear cap binding protein subunit 2	AK012659|Ncbp2|68092|nuclear cap binding protein subunit 2	AK014016|Ncbp2|68092|nuclear cap binding protein subunit 2	AK135597|Ncbp2|68092|nuclear cap binding protein subunit 2	AK077841|Ncbp2|68092|nuclear cap binding protein subunit 2	BC118926|Ncbp2|68092|nuclear cap binding protein subunit 2
mm9_v1_chr12_-_113912266_113912513	0.269074	NFIX.p2	AK154936|Akt1|11651|thymoma viral proto-oncogene 1	AK040758|Akt1|11651|thymoma viral proto-oncogene 1	X65687|Akt1|11651|thymoma viral proto-oncogene 1	BC066018|Akt1|11651|thymoma viral proto-oncogene 1	NM_001165894|Akt1|11651|thymoma viral proto-oncogene 1	NM_009652|Akt1|11651|thymoma viral proto-oncogene 1
mm9_v1_chr16_-_31948214_31948358	0.268912	NFIX.p2	
mm9_v1_chr10_-_76978494_76978577	0.267397	NFIX.p2	BC034216|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	AK088306|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	AK076516|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	AF391115|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene	NM_133998|1810008A18Rik|108707|RIKEN cDNA 1810008A18 gene
mm9_v1_chr7_-_134160841_134160854	0.264153	NFIX.p2	AK013840|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr1_-_192886758_192886821	0.26309	NFIX.p2	AK156071|Tatdn3|68972|TatD DNase domain containing 3	AK005193|Tatdn3|68972|TatD DNase domain containing 3	BC061248|Tatdn3|68972|TatD DNase domain containing 3	NM_001163421|Tatdn3|68972|TatD DNase domain containing 3	NM_001163422|Tatdn3|68972|TatD DNase domain containing 3	NM_026895|Tatdn3|68972|TatD DNase domain containing 3
mm9_v1_chr5_-_8622882_8622951	0.261049	NFIX.p2	BC058808|Rundc3b|242819|RUN domain containing 3B	NM_198620|Rundc3b|242819|RUN domain containing 3B
mm9_v1_chr14_+_27852148_27852279	0.260631	NFIX.p2	AF494210|Il17rd|171463|interleukin 17 receptor D	NM_134437|Il17rd|171463|interleukin 17 receptor D	BC138629|Il17rd|171463|interleukin 17 receptor D	BC066804|Il17rd|171463|interleukin 17 receptor D	AF459444|Il17rd|171463|interleukin 17 receptor D
mm9_v1_chr11_-_98261715_98261736	0.25962	NFIX.p2	AK170817|Pgap3|320655|post-GPI attachment to proteins 3	AK052486|Pgap3|320655|post-GPI attachment to proteins 3	AK078974|Pgap3|320655|post-GPI attachment to proteins 3	BC035945|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr7_-_121261237_121261289	0.259031	NFIX.p2	BC003871|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172113|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172037|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2
mm9_v1_chr11_+_57917712_57917754	0.256448	NFIX.p2	AK007581|Cnot8|69125|CCR4-NOT transcription complex, subunit 8
mm9_v1_chr19_+_47253484_47253552	0.255065	NFIX.p2	BC058386|Neurl1a|18011|neuralized homolog 1A (Drosophila)	AK046382|Neurl1a|18011|neuralized homolog 1A (Drosophila)
mm9_v1_chr11_-_3352243_3352377	0.254747	NFIX.p2	AK167455|Rnf185|193670|ring finger protein 185	AK077638|Rnf185|193670|ring finger protein 185	BC014812|Rnf185|193670|ring finger protein 185	AK149640|Rnf185|193670|ring finger protein 185	AK168904|Rnf185|193670|ring finger protein 185	AK053358|Rnf185|193670|ring finger protein 185	AK034108|Rnf185|193670|ring finger protein 185	NM_145355|Rnf185|193670|ring finger protein 185	AK052436|Rnf185|193670|ring finger protein 185
mm9_v1_chr6_-_90666474_90666531	0.254451	NFIX.p2	NM_001134383|Iqsec1|232227|IQ motif and Sec7 domain 1
mm9_v1_chr4_-_116324064_116324305	0.25325	NFIX.p2	AF225564|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC046762|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011321|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011794|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK160185|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK005376|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK152086|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC039926|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011908|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK144198|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK168950|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011388|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011918|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK146081|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK159573|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK164461|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011667|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK011856|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK146278|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AY207463|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	NM_021473|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr9_+_120213190_120213236	0.252722	NFIX.p2	AK083225|Myrip|245049|myosin VIIA and Rab interacting protein	NM_144557|Myrip|245049|myosin VIIA and Rab interacting protein	AK038988|Myrip|245049|myosin VIIA and Rab interacting protein
mm9_v1_chr2_-_5635517_5635531	0.250705	NFIX.p2	AK147657|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	AK162754|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr13_+_32893989_32894122	0.250693	NFIX.p2	AB056151|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr18_-_36838775_36838784	0.250443	NFIX.p2	BC024136|Apbb3|225372|amyloid beta (A4) precursor protein-binding, family B, member 3
mm9_v1_chr2_+_4322020_4322021	0.250113	NFIX.p2	BC082808|Frmd4a|209630|FERM domain containing 4A	NM_001177843|Frmd4a|209630|FERM domain containing 4A
mm9_v1_chr1_-_160286359_160286472	0.249415	NFIX.p2	BC067038|Fam5b|240843|family with sequence similarity 5, member B	BC076572|Fam5b|240843|family with sequence similarity 5, member B	NM_207583|Fam5b|240843|family with sequence similarity 5, member B	AK032297|Fam5b|240843|family with sequence similarity 5, member B	AK047824|Fam5b|240843|family with sequence similarity 5, member B	AK122549|Fam5b|240843|family with sequence similarity 5, member B
mm9_v1_chr7_-_112959577_112959585	0.247742	NFIX.p2	AK007828|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr17_-_80461323_80461479	0.245274	NFIX.p2	AK012866|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like	AK048900|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like	AK171091|Hnrpll|72692|heterogeneous nuclear ribonucleoprotein L-like
mm9_v1_chr6_+_113554785_113554826	0.243628	NFIX.p2	AK190298|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene	AK193342|6720456B07Rik|101314|RIKEN cDNA 6720456B07 gene
mm9_v1_chr7_-_139767997_139768034	0.242137	NFIX.p2	BC008119|Oat|18242|ornithine aminotransferase	AK146413|Oat|18242|ornithine aminotransferase	AK168851|Oat|18242|ornithine aminotransferase
mm9_v1_chr11_+_78325715_78325934	0.237298	NFIX.p2	AK165703|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	BC012879|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	BC006833|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	NM_026389|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2	AK196491|Poldip2|67811|polymerase (DNA-directed), delta interacting protein 2
mm9_v1_chr12_-_113205152_113205166	0.237229	NFIX.p2	BC055712|2010107E04Rik|70257|RIKEN cDNA 2010107E04 gene
mm9_v1_chr8_+_3515373_3515441	0.235864	NFIX.p2	AF173829|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_001122818|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_015801|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK040720|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC054789|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC056999|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr1_+_174249713_174249834	0.235516	NFIX.p2	
mm9_v1_chr11_+_68884268_68884388	0.227861	NFIX.p2	NM_025838|Tmem107|66910|transmembrane protein 107	NM_028336|Tmem107|66910|transmembrane protein 107	AK012938|Tmem107|66910|transmembrane protein 107	AK154279|Tmem107|66910|transmembrane protein 107	AK003403|Tmem107|66910|transmembrane protein 107	AK002804|Tmem107|66910|transmembrane protein 107	BC096686|Tmem107|66910|transmembrane protein 107	BC137584|Tmem107|66910|transmembrane protein 107	BC120499|Tmem107|66910|transmembrane protein 107
mm9_v1_chr3_-_83959616_83959707	0.227722	NFIX.p2	AK011664|Mnd1|76915|meiotic nuclear divisions 1 homolog (S. cerevisiae)	BC027741|Mnd1|76915|meiotic nuclear divisions 1 homolog (S. cerevisiae)	NM_029797|Mnd1|76915|meiotic nuclear divisions 1 homolog (S. cerevisiae)
mm9_v1_chr11_-_115281230_115281278	0.223193	NFIX.p2	BC016547|Atp5h|71679|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d	BC081431|Atp5h|71679|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d	AK002376|Atp5h|71679|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d	NM_027862|Atp5h|71679|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d
mm9_v1_chr11_-_63892874_63892978	0.222778	NFIX.p2	AK213695|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC038046|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC018301|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK149999|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK171661|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK010385|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK154668|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK156865|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK172718|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	NM_178379|Cox10|70383|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
mm9_v1_chr13_-_115178227_115178301	0.220503	NFIX.p2	AF124785|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK020552|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	BC004618|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK011124|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK020108|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	NM_010887|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm9_v1_chr9_-_109733967_109734002	0.219286	NFIX.p2	BC024703|3000002C10Rik|378954|glyceraldehyde-3-phosphate dehydrogenase pseudogene
mm9_v1_chr7_-_108986297_108986435	0.217606	NFIX.p2	AK133359|Inppl1|16332|inositol polyphosphate phosphatase-like 1	AK149873|Inppl1|16332|inositol polyphosphate phosphatase-like 1	NM_001122739|Inppl1|16332|inositol polyphosphate phosphatase-like 1	BC063080|Inppl1|16332|inositol polyphosphate phosphatase-like 1
mm9_v1_chrX_+_12164878_12165013	0.215979	NFIX.p2	NM_027439|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK168139|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK076495|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK017482|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK151735|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AK029405|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	AB192471|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2	BC014706|Atp6ap2|70495|ATPase, H+ transporting, lysosomal accessory protein 2
mm9_v1_chr11_+_59319654_59319693	0.215798	NFIX.p2	AK011602|4933439C10Rik|74476|RIKEN cDNA 4933439C10 gene
mm9_v1_chr19_-_7015682_7015704	0.212619	NFIX.p2	NM_001177360|Gpr137|107173|G protein-coupled receptor 137	NM_207220|Gpr137|107173|G protein-coupled receptor 137
mm9_v1_chr15_+_40486577_40486623	0.210661	NFIX.p2	AK046521|Zfpm2|22762|zinc finger protein, multitype 2	NM_011766|Zfpm2|22762|zinc finger protein, multitype 2	AF125166|Zfpm2|22762|zinc finger protein, multitype 2
mm9_v1_chr16_+_55966387_55966447	0.210422	NFIX.p2	NM_024218|Rpl24|68193|ribosomal protein L24
mm9_v1_chr7_+_19609771_19609790	0.208694	NFIX.p2	AK155375|Sympk|68188|symplekin	AK172040|Sympk|68188|symplekin	BC049852|Sympk|68188|symplekin
mm9_v1_chrX_-_96086314_96086363	0.207018	NFIX.p2	AK031419|Ophn1|94190|oligophrenin 1	AK036038|Ophn1|94190|oligophrenin 1	AK043239|Ophn1|94190|oligophrenin 1	AK048153|Ophn1|94190|oligophrenin 1	AK166392|Ophn1|94190|oligophrenin 1	NM_052976|Ophn1|94190|oligophrenin 1	AK039304|Ophn1|94190|oligophrenin 1
mm9_v1_chr3_-_63733328_63733393	0.205157	NFIX.p2	BC125500|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	BC132160|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chr18_-_66451420_66451491	0.205129	NFIX.p2	AK039742|Ccbe1|320924|collagen and calcium binding EGF domains 1	BC103803|Ccbe1|320924|collagen and calcium binding EGF domains 1	BC152322|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK220435|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK035153|Ccbe1|320924|collagen and calcium binding EGF domains 1	AK028377|Ccbe1|320924|collagen and calcium binding EGF domains 1	NM_178793|Ccbe1|320924|collagen and calcium binding EGF domains 1
mm9_v1_chr19_+_16207300_16207320	0.202111	NFIX.p2	AK147393|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide	NM_008139|Gnaq|14682|guanine nucleotide binding protein, alpha q polypeptide
mm9_v1_chr17_-_7152972_7153124	0.200254	NFIX.p2	BC110284|Rsph3a|66832|radial spoke 3A homolog (Chlamydomonas)
mm9_v1_chr17_+_24563575_24563652	0.198231	NFIX.p2	AK004838|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	AK029481|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	NM_010023|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	AK077386|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	BC054444|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	BC022712|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)	Z14049|Dci|13177|dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase)
mm9_v1_chr17_-_45686604_45686625	0.196977	NFIX.p2	BC079879|Tmem151b|210573|transmembrane protein 151B	NM_001013749|Tmem151b|210573|transmembrane protein 151B
mm9_v1_chr7_-_3169082_3169203	0.195902	NFIX.p2	BC050126|AU018091|245128|expressed sequence AU018091	AB201954|AU018091|245128|expressed sequence AU018091	BC080735|AU018091|245128|expressed sequence AU018091	NM_001004153|AU018091|245128|expressed sequence AU018091
mm9_v1_chr6_+_115528094_115528179	0.194814	NFIX.p2	
mm9_v1_chr11_-_77326748_77326921	0.192672	NFIX.p2	BC147324|Trp53i13|216964|transformation related protein 53 inducible protein 13	BC147325|Trp53i13|216964|transformation related protein 53 inducible protein 13	NM_001024920|Trp53i13|216964|transformation related protein 53 inducible protein 13
mm9_v1_chr4_-_88940294_88940522	0.192631	NFIX.p2	EU071702|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	AB221638|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	BC058190|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	L76092|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	S80650|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	NM_009877|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A
mm9_v1_chr8_-_81923366_81923445	0.192061	NFIX.p2	BC058693|Smad1|17125|MAD homolog 1 (Drosophila)	NM_008539|Smad1|17125|MAD homolog 1 (Drosophila)	AK084505|Smad1|17125|MAD homolog 1 (Drosophila)	AK158509|Smad1|17125|MAD homolog 1 (Drosophila)
mm9_v1_chr6_+_126889979_126890004	0.190391	NFIX.p2	AK037095|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK045541|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	NM_138594|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK043521|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK137201|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK042976|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed	AK046707|D6Wsu163e|28040|DNA segment, Chr 6, Wayne State University 163, expressed
mm9_v1_chr13_-_69750307_69750356	0.189938	NFIX.p2	BC079863|Srd5a1|78925|steroid 5 alpha-reductase 1	BC094503|Srd5a1|78925|steroid 5 alpha-reductase 1	NM_175283|Srd5a1|78925|steroid 5 alpha-reductase 1
mm9_v1_chr4_-_148859250_148859404	0.188275	NFIX.p2	AY679721|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	NM_133435|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	AK017631|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	AK011137|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	AK012194|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	AK152407|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	BC138500|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	BC138502|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1	AF260925|Nmnat1|66454|nicotinamide nucleotide adenylyltransferase 1
mm9_v1_chr2_-_91805686_91805756	0.187744	NFIX.p2	AK170936|Dgkz|104418|diacylglycerol kinase zeta
mm9_v1_chr19_-_24936327_24936331	0.185249	NFIX.p2	AK035507|Pgm5|226041|phosphoglucomutase 5	NM_175013|Pgm5|226041|phosphoglucomutase 5
mm9_v1_chr11_+_69867869_69867875	0.181819	NFIX.p2	NM_009714|Asgr1|11889|asialoglycoprotein receptor 1
mm9_v1_chr14_-_31814725_31814758	0.180937	NFIX.p2	BC034270|Spcs1|69019|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm9_v1_chr7_+_151016088_151016155	0.177489	NFIX.p2	AF057368|Dhcr7|13360|7-dehydrocholesterol reductase	AK146811|Dhcr7|13360|7-dehydrocholesterol reductase	BC006854|Dhcr7|13360|7-dehydrocholesterol reductase
mm9_v1_chr8_-_11550681_11550711	0.176047	NFIX.p2	
mm9_v1_chr14_-_21365595_21365800	0.175786	NFIX.p2	BC037668|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AK135203|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	M81483|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	AB221678|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	BC066000|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform	NM_008914|Ppp3cb|19056|protein phosphatase 3, catalytic subunit, beta isoform
mm9_v1_chr10_-_7382974_7383127	0.17454	NFIX.p2	BC040750|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	D38023|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	M60320|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	AK006162|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	BC058966|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	BC049613|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm9_v1_chr9_-_20297116_20297218	0.172612	NFIX.p2	AK036912|Zfp426|235028|zinc finger protein 426	AK048284|Zfp426|235028|zinc finger protein 426	BC023931|Zfp426|235028|zinc finger protein 426	BC024805|Zfp426|235028|zinc finger protein 426	AK220563|Zfp426|235028|zinc finger protein 426	AK085144|Zfp426|235028|zinc finger protein 426	NM_001110309|Zfp426|235028|zinc finger protein 426	NM_146221|Zfp426|235028|zinc finger protein 426
mm9_v1_chr1_+_82583495_82583550	0.172103	NFIX.p2	AK086939|Col4a3|12828|collagen, type IV, alpha 3	NM_007734|Col4a3|12828|collagen, type IV, alpha 3	AF169387|Col4a3|12828|collagen, type IV, alpha 3
mm9_v1_chr4_+_101180580_101180604	0.171885	NFIX.p2	NM_001164584|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	NM_001164585|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK030374|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6	AK122293|Dnajc6|72685|DnaJ (Hsp40) homolog, subfamily C, member 6
mm9_v1_chrX_-_9793824_9794045	0.168265	NFIX.p2	AJ238396|Rpgr|19893|retinitis pigmentosa GTPase regulator	AF044677|Rpgr|19893|retinitis pigmentosa GTPase regulator	BC012661|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK136298|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK017192|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK081631|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK038652|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177950|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177951|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177953|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177954|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_011285|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK029864|Rpgr|19893|retinitis pigmentosa GTPase regulator
mm9_v1_chr5_-_123271207_123271281	0.167927	NFIX.p2	AK152528|Anapc5|59008|anaphase-promoting complex subunit 5	BC010339|Anapc5|59008|anaphase-promoting complex subunit 5	AK013978|Anapc5|59008|anaphase-promoting complex subunit 5	AK031432|Anapc5|59008|anaphase-promoting complex subunit 5	AK168135|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr2_+_172825609_172825642	0.166318	NFIX.p2	BC060072|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	AK079383|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)	NM_175112|Rae1|66679|RAE1 RNA export 1 homolog (S. pombe)
mm9_v1_chr14_-_31814779_31814851	0.16617	NFIX.p2	NM_026911|Spcs1|69019|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_157005804_157006022	0.164909	NFIX.p2	NM_021433|Stx6|58244|syntaxin 6	AK018167|Stx6|58244|syntaxin 6	AK031673|Stx6|58244|syntaxin 6	AK159392|Stx6|58244|syntaxin 6	AK019106|Stx6|58244|syntaxin 6	AK044905|Stx6|58244|syntaxin 6	AK049124|Stx6|58244|syntaxin 6	AK009690|Stx6|58244|syntaxin 6	AK151549|Stx6|58244|syntaxin 6	BC029205|Stx6|58244|syntaxin 6	AF237814|Stx6|58244|syntaxin 6
mm9_v1_chr7_+_120909509_120909519	0.163971	NFIX.p2	NM_145584|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr19_+_45122065_45122176	0.157678	NFIX.p2	NM_001178012|Sfxn3|94280|sideroflexin 3	NM_001178013|Sfxn3|94280|sideroflexin 3	NM_053197|Sfxn3|94280|sideroflexin 3	BC012208|Sfxn3|94280|sideroflexin 3
mm9_v1_chr8_+_13339673_13339702	0.155834	NFIX.p2	NM_009361|Tfdp1|21781|transcription factor Dp 1	X72310|Tfdp1|21781|transcription factor Dp 1	BC132567|Tfdp1|21781|transcription factor Dp 1	BC132569|Tfdp1|21781|transcription factor Dp 1	BC145344|Tfdp1|21781|transcription factor Dp 1
mm9_v1_chr8_+_109417539_109417610	0.155476	NFIX.p2	NM_011574|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	BC068113|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK144455|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK146263|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK150862|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK168470|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)	AK173318|Cirh1a|21771|cirrhosis, autosomal recessive 1A (human)
mm9_v1_chr8_-_97400173_97400261	0.155337	NFIX.p2	BC004705|Dok4|114255|docking protein 4	AK032352|Dok4|114255|docking protein 4	AK077612|Dok4|114255|docking protein 4	AK156485|Dok4|114255|docking protein 4	NM_053246|Dok4|114255|docking protein 4
mm9_v1_chr14_-_21871647_21871707	0.155101	NFIX.p2	AF242857|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit	NM_018829|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr12_-_88488851_88488917	0.154542	NFIX.p2	AK076813|Pomt2|217734|protein-O-mannosyltransferase 2	AY090481|Pomt2|217734|protein-O-mannosyltransferase 2	NM_153415|Pomt2|217734|protein-O-mannosyltransferase 2	AK085703|Pomt2|217734|protein-O-mannosyltransferase 2
mm9_v1_chr6_-_113451811_113451890	0.151739	NFIX.p2	BC058349|Prrt3|210673|proline-rich transmembrane protein 3	NM_172487|Prrt3|210673|proline-rich transmembrane protein 3	AK136854|Prrt3|210673|proline-rich transmembrane protein 3	AK045491|Prrt3|210673|proline-rich transmembrane protein 3	AK045678|Prrt3|210673|proline-rich transmembrane protein 3
mm9_v1_chr19_-_6915038_6915131	0.151604	NFIX.p2	AK195314|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AF074714|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	NM_019924|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK089467|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	AK154674|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4	BC012964|Rps6ka4|56613|ribosomal protein S6 kinase, polypeptide 4
mm9_v1_chrX_+_35669345_35669443	0.151478	NFIX.p2	BC137923|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	BC137924|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AK053500|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348324|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	AF348325|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide	NM_133690|Atp1b4|67821|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm9_v1_chr14_+_35123922_35124003	0.147928	NFIX.p2	BC052724|Glud1|14661|glutamate dehydrogenase 1	BC057347|Glud1|14661|glutamate dehydrogenase 1
mm9_v1_chr7_+_19609725_19609766	0.146785	NFIX.p2	AK155093|Sympk|68188|symplekin	NM_026605|Sympk|68188|symplekin	AK146894|Sympk|68188|symplekin	AK168541|Sympk|68188|symplekin	AK168757|Sympk|68188|symplekin	AK165591|Sympk|68188|symplekin
mm9_v1_chr4_-_41222121_41222174	0.146259	NFIX.p2	BC007179|Ubap2|68926|ubiquitin-associated protein 2	NM_026872|Ubap2|68926|ubiquitin-associated protein 2
mm9_v1_chr9_-_54874200_54874368	0.145811	NFIX.p2	AY574262|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AF325346|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	BC120597|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	BC120599|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AF472588|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK053497|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK148786|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AF459029|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK080475|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK080415|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	NM_145129|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3	AK051730|Chrna3|110834|cholinergic receptor, nicotinic, alpha polypeptide 3
mm9_v1_chr11_-_101888199_101888275	0.144154	NFIX.p2	AF079366|Mpp3|13384|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC062642|Mpp3|13384|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK032270|Mpp3|13384|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK047456|Mpp3|13384|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK163205|Mpp3|13384|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_007863|Mpp3|13384|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
mm9_v1_chr4_+_44994235_44994334	0.141227	NFIX.p2	AK004307|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AK018293|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	BC010194|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	NM_080289|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AK168351|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AY113690|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase	AK172201|Grhpr|76238|glyoxylate reductase/hydroxypyruvate reductase
mm9_v1_chr13_-_33251581_33251622	0.141193	NFIX.p2	AK014448|Serpinb9c|20707|serine (or cysteine) peptidase inhibitor, clade B, member 9c	AK017139|Serpinb9c|20707|serine (or cysteine) peptidase inhibitor, clade B, member 9c	NM_001164524|Serpinb9c|20707|serine (or cysteine) peptidase inhibitor, clade B, member 9c
mm9_v1_chr13_-_94407590_94407712	0.13796	NFIX.p2	NM_016668|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr12_-_27100017_27100080	0.137501	NFIX.p2	AK038586|Rnf144a|108089|ring finger protein 144A	BC030187|Rnf144a|108089|ring finger protein 144A
mm9_v1_chr11_-_115128540_115128560	0.13739	NFIX.p2	NM_010350|Grin2c|14813|glutamate receptor, ionotropic, NMDA2C (epsilon 3)
mm9_v1_chr10_+_62383400_62383491	0.136769	NFIX.p2	BC062168|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16	BC138983|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16	BC138984|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16	BC025015|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm9_v1_chr16_+_95923988_95924060	0.135428	NFIX.p2	NM_011809|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain	AK038348|Ets2|23872|E26 avian leukemia oncogene 2, 3' domain
mm9_v1_chr8_+_112302530_112302620	0.13491	NFIX.p2	AK036387|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	NM_009677|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	X54424|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	AK145821|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC052703|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit	BC054535|Ap1g1|11765|adaptor protein complex AP-1, gamma 1 subunit
mm9_v1_chr16_+_45159173_45159221	0.134726	NFIX.p2	AB079386|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr4_-_154596628_154596643	0.130197	NFIX.p2	AF435852|Ski|20481|ski sarcoma viral oncogene homolog (avian)	BC068305|Ski|20481|ski sarcoma viral oncogene homolog (avian)	NM_011385|Ski|20481|ski sarcoma viral oncogene homolog (avian)
mm9_v1_chr11_-_97011025_97011025	0.128865	NFIX.p2	BC057590|Tbkbp1|73174|TBK1 binding protein 1	NM_198100|Tbkbp1|73174|TBK1 binding protein 1
mm9_v1_chr18_+_77424738_77424806	0.126528	NFIX.p2	X98014|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	AK078670|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	AK162549|St8sia5|225742|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
mm9_v1_chr5_-_120953567_120953653	0.122702	NFIX.p2	AK030234|Plbd2|71772|phospholipase B domain containing 2	BC026395|Plbd2|71772|phospholipase B domain containing 2	BC038605|Plbd2|71772|phospholipase B domain containing 2	AF217003|Plbd2|71772|phospholipase B domain containing 2	BC060095|Plbd2|71772|phospholipase B domain containing 2	AK164220|Plbd2|71772|phospholipase B domain containing 2	AK170631|Plbd2|71772|phospholipase B domain containing 2	BC048826|Plbd2|71772|phospholipase B domain containing 2	AK043608|Plbd2|71772|phospholipase B domain containing 2	AK046937|Plbd2|71772|phospholipase B domain containing 2	AK150201|Plbd2|71772|phospholipase B domain containing 2	AK170387|Plbd2|71772|phospholipase B domain containing 2	AK032930|Plbd2|71772|phospholipase B domain containing 2	AK042089|Plbd2|71772|phospholipase B domain containing 2	AK029813|Plbd2|71772|phospholipase B domain containing 2	NM_023625|Plbd2|71772|phospholipase B domain containing 2	AK004973|Plbd2|71772|phospholipase B domain containing 2
mm9_v1_chr13_-_94407548_94407555	0.122446	NFIX.p2	AK145668|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr7_-_112959591_112959616	0.121271	NFIX.p2	NM_025301|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr18_-_36838916_36838928	0.120619	NFIX.p2	AK141878|Apbb3|225372|amyloid beta (A4) precursor protein-binding, family B, member 3
mm9_v1_chr2_-_154900188_154900232	0.120419	NFIX.p2	AK151097|Ahcy|269378|S-adenosylhomocysteine hydrolase	AK153421|Ahcy|269378|S-adenosylhomocysteine hydrolase	AK154302|Ahcy|269378|S-adenosylhomocysteine hydrolase	AK169331|Ahcy|269378|S-adenosylhomocysteine hydrolase	NM_016661|Ahcy|269378|S-adenosylhomocysteine hydrolase
mm9_v1_chr14_+_31814801_31814892	0.119891	NFIX.p2	BC055709|Glt8d1|76485|glycosyltransferase 8 domain containing 1	BC058731|Glt8d1|76485|glycosyltransferase 8 domain containing 1	AK010388|Glt8d1|76485|glycosyltransferase 8 domain containing 1
mm9_v1_chr11_-_17111582_17111598	0.119214	NFIX.p2	AK146152|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	AK168177|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)	NM_025443|Pno1|66249|partner of NOB1 homolog (S. cerevisiae)
mm9_v1_chr9_-_8042801_8042822	0.118899	NFIX.p2	BC115525|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	BC127165|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	BC133669|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	AK033793|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene	NM_199017|9230110C19Rik|234912|RIKEN cDNA 9230110C19 gene
mm9_v1_chr16_-_10542689_10542847	0.117437	NFIX.p2	AK183993|Dexi|58239|dexamethasone-induced transcript	AF152470|Dexi|58239|dexamethasone-induced transcript
mm9_v1_chr12_-_21291800_21292119	0.11354	NFIX.p2	AK007635|Itgb1bp1|16413|integrin beta 1 binding protein 1	AK089937|Itgb1bp1|16413|integrin beta 1 binding protein 1	BC021151|Itgb1bp1|16413|integrin beta 1 binding protein 1	AK147929|Itgb1bp1|16413|integrin beta 1 binding protein 1	AK002786|Itgb1bp1|16413|integrin beta 1 binding protein 1	AK004172|Itgb1bp1|16413|integrin beta 1 binding protein 1	AJ001373|Itgb1bp1|16413|integrin beta 1 binding protein 1	AK075577|Itgb1bp1|16413|integrin beta 1 binding protein 1	NM_008403|Itgb1bp1|16413|integrin beta 1 binding protein 1
mm9_v1_chr7_-_116226796_116226848	0.112383	NFIX.p2	AK053760|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK082275|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK134663|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK149334|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK038724|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK138641|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001038624|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_178780|Ric3|320360|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
mm9_v1_chr8_-_30330079_30330107	0.11186	NFIX.p2	AJ487854|Unc5d|210801|unc-5 homolog D (C. elegans)	NM_153135|Unc5d|210801|unc-5 homolog D (C. elegans)
mm9_v1_chr11_-_66866101_66866132	0.10906	NFIX.p2	NM_025510|2310004I24Rik|66358|RIKEN cDNA 2310004I24 gene
mm9_v1_chr19_+_53217238_53217304	0.108521	NFIX.p2	NM_001164100|Add3|27360|adducin 3 (gamma)	AK144174|Add3|27360|adducin 3 (gamma)
mm9_v1_chr11_-_109472638_109472693	0.108458	NFIX.p2	BC024883|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1	BC024811|Wipi1|52639|WD repeat domain, phosphoinositide interacting 1
mm9_v1_chr3_-_37623250_37623411	0.104992	NFIX.p2	AK039231|Gm5148|381438|predicted gene 5148	AK039519|Gm5148|381438|predicted gene 5148	AK039710|Gm5148|381438|predicted gene 5148	NM_198657|Gm5148|381438|predicted gene 5148	AK045832|Gm5148|381438|predicted gene 5148
mm9_v1_chr4_+_135845910_135845945	0.103534	NFIX.p2	BC092398|Zfp46|22704|zinc finger protein 46
mm9_v1_chr9_+_107904919_107905018	0.102333	NFIX.p2	AK172921|Ip6k1|27399|inositol hexaphosphate kinase 1	AK037925|Ip6k1|27399|inositol hexaphosphate kinase 1	AK088872|Ip6k1|27399|inositol hexaphosphate kinase 1	BC053030|Ip6k1|27399|inositol hexaphosphate kinase 1	AK171310|Ip6k1|27399|inositol hexaphosphate kinase 1	AK166143|Ip6k1|27399|inositol hexaphosphate kinase 1	BC059006|Ip6k1|27399|inositol hexaphosphate kinase 1	NM_013785|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chr9_+_106331820_106331904	0.0978796	NFIX.p2	AK141477|Rpl29|19944|ribosomal protein L29	BC086897|Rpl29|19944|ribosomal protein L29	BC087950|Rpl29|19944|ribosomal protein L29	AK167284|Rpl29|19944|ribosomal protein L29	BC086898|Rpl29|19944|ribosomal protein L29	AK088551|Rpl29|19944|ribosomal protein L29	AK013307|Rpl29|19944|ribosomal protein L29	NM_009082|Rpl29|19944|ribosomal protein L29	BC092262|Rpl29|19944|ribosomal protein L29	BC094039|Rpl29|19944|ribosomal protein L29	BC096575|Rpl29|19944|ribosomal protein L29	BC002062|Rpl29|19944|ribosomal protein L29	BC019179|Rpl29|19944|ribosomal protein L29	BC082292|Rpl29|19944|ribosomal protein L29	L08651|Rpl29|19944|ribosomal protein L29	BC081467|Rpl29|19944|ribosomal protein L29
mm9_v1_chr10_+_62383370_62383381	0.0972911	NFIX.p2	AK030865|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16	NM_175194|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm9_v1_chr3_-_107320831_107320842	0.0969808	NFIX.p2	AK083807|Slc6a17|229706|solute carrier family 6 (neurotransmitter transporter), member 17
mm9_v1_chr3_-_27609279_27609407	0.0966243	NFIX.p2	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr13_+_32894489_32894508	0.095314	NFIX.p2	BC058744|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr19_-_45857542_45857780	0.0947682	NFIX.p2	AF132214|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC020093|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	BC054821|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)	NM_023799|Mgea5|76055|meningioma expressed antigen 5 (hyaluronidase)
mm9_v1_chr13_+_95746298_95746380	0.0940976	NFIX.p2	AK082348|Wdr41|218460|WD repeat domain 41	NM_172590|Wdr41|218460|WD repeat domain 41	AK046853|Wdr41|218460|WD repeat domain 41	AK149993|Wdr41|218460|WD repeat domain 41
mm9_v1_chr19_-_7015923_7016010	0.0921027	NFIX.p2	BC048078|Gpr137|107173|G protein-coupled receptor 137	AK170308|Gpr137|107173|G protein-coupled receptor 137	NM_001177362|Gpr137|107173|G protein-coupled receptor 137
mm9_v1_chr1_+_157883131_157883262	0.0920729	NFIX.p2	NM_001160182|Tor1aip2|240832|torsin A interacting protein 2	BC060258|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr8_-_113426341_113426387	0.0893003	NFIX.p2	AK140503|Fuk|234730|fucokinase	AK164340|Fuk|234730|fucokinase	AJ297482|Fuk|234730|fucokinase	AJ534942|Fuk|234730|fucokinase	AY223865|Fuk|234730|fucokinase	NM_172283|Fuk|234730|fucokinase	NM_181666|Fuk|234730|fucokinase	AK161763|Fuk|234730|fucokinase
mm9_v1_chr11_-_115128586_115128612	0.0889021	NFIX.p2	AK147390|Grin2c|14813|glutamate receptor, ionotropic, NMDA2C (epsilon 3)
mm9_v1_chr7_-_72017803_72017939	0.0884051	NFIX.p2	AF319979|Ndnl2|66647|necdin-like 2	BC034892|Ndnl2|66647|necdin-like 2	AK131157|Ndnl2|66647|necdin-like 2	AK010294|Ndnl2|66647|necdin-like 2	AK018250|Ndnl2|66647|necdin-like 2	BC092289|Ndnl2|66647|necdin-like 2	AK049759|Ndnl2|66647|necdin-like 2	AK076471|Ndnl2|66647|necdin-like 2	AK017727|Ndnl2|66647|necdin-like 2	NM_023239|Ndnl2|66647|necdin-like 2
mm9_v1_chr17_+_24686778_24686992	0.0862393	NFIX.p2	BC099589|Pkd1|18763|polycystic kidney disease 1 homolog	NM_013630|Pkd1|18763|polycystic kidney disease 1 homolog	U70209|Pkd1|18763|polycystic kidney disease 1 homolog
mm9_v1_chr7_-_134160864_134160869	0.0856329	NFIX.p2	BC003932|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene	NM_030240|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr18_-_34911152_34911201	0.0851376	NFIX.p2	U15562|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	L16926|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK168287|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AK141737|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	NM_009860|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)	AF347115|Cdc25c|12532|cell division cycle 25 homolog C (S. pombe)
mm9_v1_chr2_-_154900160_154900169	0.0850426	NFIX.p2	BC086781|Ahcy|269378|S-adenosylhomocysteine hydrolase	BC015304|Ahcy|269378|S-adenosylhomocysteine hydrolase	BC108367|Ahcy|269378|S-adenosylhomocysteine hydrolase
mm9_v1_chr2_+_34262372_34262384	0.0843779	NFIX.p2	AK042154|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	AK148428|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr14_+_76245144_76245241	0.083805	NFIX.p2	BC092381|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr10_-_70700764_70701027	0.0815017	NFIX.p2	U57939|Tfam|21780|transcription factor A, mitochondrial	AK004857|Tfam|21780|transcription factor A, mitochondrial	BC001987|Tfam|21780|transcription factor A, mitochondrial	BC083084|Tfam|21780|transcription factor A, mitochondrial	AK050446|Tfam|21780|transcription factor A, mitochondrial	AK167348|Tfam|21780|transcription factor A, mitochondrial	NM_009360|Tfam|21780|transcription factor A, mitochondrial	AK163563|Tfam|21780|transcription factor A, mitochondrial	AK017974|Tfam|21780|transcription factor A, mitochondrial	AK161747|Tfam|21780|transcription factor A, mitochondrial	AK167777|Tfam|21780|transcription factor A, mitochondrial	AK169808|Tfam|21780|transcription factor A, mitochondrial	U63859|Tfam|21780|transcription factor A, mitochondrial	U63858|Tfam|21780|transcription factor A, mitochondrial	U63712|Tfam|21780|transcription factor A, mitochondrial
mm9_v1_chr5_+_114764949_114764949	0.0814961	NFIX.p2	NM_001164573|Myo1h|231646|myosin 1H
mm9_v1_chr9_+_123276047_123276053	0.0807519	NFIX.p2	AK032695|Lars2|102436|leucyl-tRNA synthetase, mitochondrial
mm9_v1_chr3_-_63733305_63733317	0.0775623	NFIX.p2	AK087526|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene	NM_177856|E130311K13Rik|329659|RIKEN cDNA E130311K13 gene
mm9_v1_chrX_-_7258126_7258153	0.0765072	NFIX.p2	BC132580|Magix|54634|MAGI family member, X-linked	BC132582|Magix|54634|MAGI family member, X-linked
mm9_v1_chr4_-_40650194_40650231	0.0759077	NFIX.p2	AK017522|Aptx|66408|aprataxin	AK088928|Aptx|66408|aprataxin	BC071213|Aptx|66408|aprataxin	AK010516|Aptx|66408|aprataxin	BC021872|Aptx|66408|aprataxin	NM_001025444|Aptx|66408|aprataxin
mm9_v1_chr10_+_74869770_74869778	0.0754705	NFIX.p2	BC021388|Upb1|103149|ureidopropionase, beta	NM_133995|Upb1|103149|ureidopropionase, beta
mm9_v1_chr11_-_66866062_66866095	0.074697	NFIX.p2	AK145941|2310004I24Rik|66358|RIKEN cDNA 2310004I24 gene	BC004029|2310004I24Rik|66358|RIKEN cDNA 2310004I24 gene	AK010520|2310004I24Rik|66358|RIKEN cDNA 2310004I24 gene	AK009142|2310004I24Rik|66358|RIKEN cDNA 2310004I24 gene
mm9_v1_chr4_-_126106749_126106807	0.0742361	NFIX.p2	AK035042|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK083652|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK171118|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	AK154436|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3	NM_153402|Eif2c3|214150|eukaryotic translation initiation factor 2C, 3
mm9_v1_chr4_+_119212261_119212343	0.0737684	NFIX.p2	AK082840|Foxj3|230700|forkhead box J3	AK171564|Foxj3|230700|forkhead box J3	AK129271|Foxj3|230700|forkhead box J3	BC058231|Foxj3|230700|forkhead box J3	NM_172699|Foxj3|230700|forkhead box J3	AK133640|Foxj3|230700|forkhead box J3	AK163298|Foxj3|230700|forkhead box J3	AK086875|Foxj3|230700|forkhead box J3	AK139508|Foxj3|230700|forkhead box J3
mm9_v1_chr4_-_116323979_116324063	0.0728744	NFIX.p2	AK128906|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK186333|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK192030|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK210646|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK219186|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	AK009462|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)	BC003850|Akr1a4|58810|aldo-keto reductase family 1, member A4 (aldehyde reductase)
mm9_v1_chr15_-_36723335_36723370	0.0726572	NFIX.p2	AK146800|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	AK150381|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	D87660|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr12_-_56921993_56922083	0.072354	NFIX.p2	AK153664|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	AK042116|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	BC145119|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1	BC150707|Ralgapa1|56784|Ral GTPase activating protein, alpha subunit 1
mm9_v1_chr11_-_59850340_59850353	0.0720944	NFIX.p2	BC026796|Pemt|18618|phosphatidylethanolamine N-methyltransferase	NM_008819|Pemt|18618|phosphatidylethanolamine N-methyltransferase
mm9_v1_chr13_-_94407455_94407526	0.0704544	NFIX.p2	AF033381|Bhmt|12116|betaine-homocysteine methyltransferase	BC093510|Bhmt|12116|betaine-homocysteine methyltransferase	BC037004|Bhmt|12116|betaine-homocysteine methyltransferase	AK077108|Bhmt|12116|betaine-homocysteine methyltransferase	AK149457|Bhmt|12116|betaine-homocysteine methyltransferase	AK166818|Bhmt|12116|betaine-homocysteine methyltransferase	AK149431|Bhmt|12116|betaine-homocysteine methyltransferase	AK166754|Bhmt|12116|betaine-homocysteine methyltransferase
mm9_v1_chr2_-_23011403_23011543	0.0701644	NFIX.p2	AK078365|Mastl|67121|microtubule associated serine/threonine kinase-like	BC103779|Mastl|67121|microtubule associated serine/threonine kinase-like	AK030140|Mastl|67121|microtubule associated serine/threonine kinase-like	NM_025979|Mastl|67121|microtubule associated serine/threonine kinase-like
mm9_v1_chrX_+_88577028_88577243	0.0698359	NFIX.p2	BC145851|Mageb2|17146|melanoma antigen, family B, 2	NM_010759|Mageb1|17145|melanoma antigen, family B, 1	BC119227|Mageb2|17146|melanoma antigen, family B, 2	AY196960|Mageb2|17146|melanoma antigen, family B, 2	NM_031171|Mageb2|17146|melanoma antigen, family B, 2
mm9_v1_chr17_-_56279684_56279770	0.0694038	NFIX.p2	AK139358|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	AK143229|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	NM_001130456|Sema6b|20359|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
mm9_v1_chr4_+_33397279_33397404	0.0691973	NFIX.p2	AK151463|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	NM_011884|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK150497|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160007|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK002922|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK079488|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK142016|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK160706|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	BC043657|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AK169305|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF034568|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase	AF025653|Rngtt|24018|RNA guanylyltransferase and 5'-phosphatase
mm9_v1_chr11_+_87983066_87983095	0.069058	NFIX.p2	NM_001172099|Cuedc1|103841|CUE domain containing 1	BC131989|Cuedc1|103841|CUE domain containing 1	BC131991|Cuedc1|103841|CUE domain containing 1	BC145206|Cuedc1|103841|CUE domain containing 1
mm9_v1_chr4_+_126846429_126846514	0.0671683	NFIX.p2	BC057615|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3	NM_198618|Dlgap3|242667|discs, large (Drosophila) homolog-associated protein 3
mm9_v1_chr5_-_124778459_124778459	0.0671338	NFIX.p2	NM_001081323|Mphosph9|269702|M-phase phosphoprotein 9
mm9_v1_chr1_+_24685377_24685468	0.066742	NFIX.p2	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr11_-_78325602_78325669	0.0663315	NFIX.p2	AK156856|Tmem199|195040|transmembrane protein 199	AK158039|Tmem199|195040|transmembrane protein 199	BC050977|Tmem199|195040|transmembrane protein 199	BC147070|Tmem199|195040|transmembrane protein 199	BC147071|Tmem199|195040|transmembrane protein 199	NM_199199|Tmem199|195040|transmembrane protein 199
mm9_v1_chr15_+_85166884_85166922	0.0625053	NFIX.p2	AK003530|Atxn10|54138|ataxin 10	AK013742|Atxn10|54138|ataxin 10
mm9_v1_chr9_-_21921573_21921635	0.0589581	NFIX.p2	BC019870|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	BC024488|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK014116|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK089052|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK002505|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)	AK003614|Elof1|66126|elongation factor 1 homolog (ELF1, S. cerevisiae)
mm9_v1_chr8_+_119467267_119467410	0.0586209	NFIX.p2	AX775769|Atmin|234776|ATM interactor	NM_177700|Atmin|234776|ATM interactor	BC060631|Atmin|234776|ATM interactor	BC027752|Atmin|234776|ATM interactor	AK122281|Atmin|234776|ATM interactor
mm9_v1_chr6_+_105627738_105627848	0.0577316	NFIX.p2	NM_001109749|Cntn4|269784|contactin 4	NM_173004|Cntn4|269784|contactin 4	AK036262|Cntn4|269784|contactin 4	BC115766|Cntn4|269784|contactin 4
mm9_v1_chr8_-_81923238_81923251	0.0565511	NFIX.p2	U74359|Smad1|17125|MAD homolog 1 (Drosophila)
mm9_v1_chr5_+_134575561_134575653	0.0553308	NFIX.p2	AJ296173|Gatsl2|80909|GATS protein-like 2	AK039122|Gatsl2|80909|GATS protein-like 2	BC094613|Gatsl2|80909|GATS protein-like 2	NM_030719|Gatsl2|80909|GATS protein-like 2	AK052217|Gatsl2|80909|GATS protein-like 2
mm9_v1_chr14_+_76245031_76245114	0.0549956	NFIX.p2	NM_009429|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr14_+_62218348_62218392	0.0548177	NFIX.p2	NM_023233|Trim13|66597|tripartite motif-containing 13	AK013959|Trim13|66597|tripartite motif-containing 13	AK017850|Trim13|66597|tripartite motif-containing 13
mm9_v1_chr14_+_76245115_76245135	0.0535927	NFIX.p2	AK166584|Tpt1|22070|tumor protein, translationally-controlled 1	AK169730|Tpt1|22070|tumor protein, translationally-controlled 1
mm9_v1_chr1_-_74552346_74552441	0.0521376	NFIX.p2	BC114208|Usp37|319651|ubiquitin specific peptidase 37	AK035640|Usp37|319651|ubiquitin specific peptidase 37
mm9_v1_chr14_+_33015123_33015189	0.0518649	NFIX.p2	AK036656|Parg|26430|poly (ADP-ribose) glycohydrolase	AK163388|Parg|26430|poly (ADP-ribose) glycohydrolase	EF382673|Parg|26430|poly (ADP-ribose) glycohydrolase	BC059827|Parg|26430|poly (ADP-ribose) glycohydrolase	NM_011960|Parg|26430|poly (ADP-ribose) glycohydrolase	BC050892|Parg|26430|poly (ADP-ribose) glycohydrolase	AK080306|Parg|26430|poly (ADP-ribose) glycohydrolase	AK164013|Parg|26430|poly (ADP-ribose) glycohydrolase	BC053037|Parg|26430|poly (ADP-ribose) glycohydrolase
mm9_v1_chr8_+_96910392_96910428	0.0510067	NFIX.p2	AK081688|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK159500|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK165832|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034991|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_022331|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK172874|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC013523|Herpud1|64209|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm9_v1_chr1_-_155179844_155179930	0.0505012	NFIX.p2	J02930|Lamc1|226519|laminin, gamma 1	AK144233|Lamc1|226519|laminin, gamma 1	J03484|Lamc1|226519|laminin, gamma 1	NM_010683|Lamc1|226519|laminin, gamma 1
mm9_v1_chr19_-_39815590_39815597	0.0481259	NFIX.p2	NM_001039555|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr5_+_139230946_139231095	0.0479209	NFIX.p2	NM_030565|Fam20c|80752|family with sequence similarity 20, member C	AK149780|Fam20c|80752|family with sequence similarity 20, member C	AK154810|Fam20c|80752|family with sequence similarity 20, member C	AY778962|Fam20c|80752|family with sequence similarity 20, member C	BC025826|Fam20c|80752|family with sequence similarity 20, member C	BC025814|Fam20c|80752|family with sequence similarity 20, member C
mm9_v1_chr4_+_151490042_151490054	0.0476463	NFIX.p2	AF329969|Tnfrsf25|85030|tumor necrosis factor receptor superfamily, member 25
mm9_v1_chr14_+_31814578_31814618	0.0429222	NFIX.p2	NM_001165930|Glt8d1|76485|glycosyltransferase 8 domain containing 1	AK077388|Glt8d1|76485|glycosyltransferase 8 domain containing 1	NM_029626|Glt8d1|76485|glycosyltransferase 8 domain containing 1
mm9_v1_chr5_-_139821054_139821222	0.0429161	NFIX.p2	AK148526|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK007984|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC031792|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_197980|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK002486|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK013260|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK003697|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK013289|Cox19|68033|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr11_-_119971500_119971623	0.0429015	NFIX.p2	AK195379|Slc38a10|72055|solute carrier family 38, member 10	AK176940|Slc38a10|72055|solute carrier family 38, member 10	AK182790|Slc38a10|72055|solute carrier family 38, member 10	BC055017|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr11_-_5815126_5815140	0.0427952	NFIX.p2	BC011139|Gck|103988|glucokinase	AK142698|Gck|103988|glucokinase
mm9_v1_chr11_-_101286641_101286646	0.0416016	NFIX.p2	AK007198|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene	NM_026865|1700113I22Rik|73635|RIKEN cDNA 1700113I22 gene
mm9_v1_chr12_+_21117704_21117848	0.0409466	NFIX.p2	AK172944|Asap2|211914|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	BC096022|Asap2|211914|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
mm9_v1_chr17_-_56214328_56214451	0.0378725	NFIX.p2	BC016412|Ubxn6|66530|UBX domain protein 6	AK148170|Ubxn6|66530|UBX domain protein 6	BC049963|Ubxn6|66530|UBX domain protein 6	NM_024432|Ubxn6|66530|UBX domain protein 6	AK008942|Ubxn6|66530|UBX domain protein 6	AF272895|Ubxn6|66530|UBX domain protein 6	AK161273|Ubxn6|66530|UBX domain protein 6	AK075705|Ubxn6|66530|UBX domain protein 6	AK082510|Ubxn6|66530|UBX domain protein 6
mm9_v1_chr5_+_130535973_130536156	0.0377833	NFIX.p2	
mm9_v1_chr4_-_128639595_128639690	0.0373386	NFIX.p2	BC138973|Adc|242669|arginine decarboxylase	BC138974|Adc|242669|arginine decarboxylase	NM_172875|Adc|242669|arginine decarboxylase	BC065772|Adc|242669|arginine decarboxylase	BC028775|Adc|242669|arginine decarboxylase	AK047522|Adc|242669|arginine decarboxylase	AK077201|Adc|242669|arginine decarboxylase	AK080568|Adc|242669|arginine decarboxylase	AK154564|Adc|242669|arginine decarboxylase	AK148717|Adc|242669|arginine decarboxylase
mm9_v1_chr1_+_75143987_75144074	0.0370104	NFIX.p2	AK218799|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chr17_-_46865894_46865924	0.0348813	NFIX.p2	AK007398|Gnmt|14711|glycine N-methyltransferase
mm9_v1_chr15_+_34767109_34767135	0.034782	NFIX.p2	AK173110|Kcns2|16539|K+ voltage-gated channel, subfamily S, 2	AK048819|Kcns2|16539|K+ voltage-gated channel, subfamily S, 2	NM_181317|Kcns2|16539|K+ voltage-gated channel, subfamily S, 2
mm9_v1_chr2_-_26092876_26092939	0.0341763	NFIX.p2	AK157992|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK140324|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	AK165642|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	BC030934|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2	NM_153559|Qsox2|227638|quiescin Q6 sulfhydryl oxidase 2
mm9_v1_chr11_+_3889935_3889935	0.0337973	NFIX.p2	AK002510|Gal3st1|53897|galactose-3-O-sulfotransferase 1	NM_001177691|Gal3st1|53897|galactose-3-O-sulfotransferase 1
mm9_v1_chr11_-_95926384_95926408	0.0326976	NFIX.p2	AK152529|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)	AK153328|Ube2z|268470|ubiquitin-conjugating enzyme E2Z (putative)
mm9_v1_chr3_-_5576086_5576166	0.0321576	NFIX.p2	BC012404|Pxmp3|19302|peroxisomal membrane protein 3	AK151121|Pxmp3|19302|peroxisomal membrane protein 3	AK152331|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163304|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163305|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163306|Pxmp3|19302|peroxisomal membrane protein 3	NM_008994|Pxmp3|19302|peroxisomal membrane protein 3	AK146530|Pxmp3|19302|peroxisomal membrane protein 3	NM_001163301|Pxmp3|19302|peroxisomal membrane protein 3
mm9_v1_chr10_+_79612410_79612424	0.0320686	NFIX.p2	AK154535|Midn|59090|midnolin
mm9_v1_chr8_-_112563233_112563253	0.0313735	NFIX.p2	AK009113|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4	NM_011998|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4	BC057886|Chst4|26887|carbohydrate (chondroitin 6/keratan) sulfotransferase 4
mm9_v1_chr4_+_49534088_49534181	0.0311308	NFIX.p2	AK051265|Zfp189|230162|zinc finger protein 189	NM_145547|Zfp189|230162|zinc finger protein 189	BC021326|Zfp189|230162|zinc finger protein 189	AK049475|Zfp189|230162|zinc finger protein 189	BC087833|Zfp189|230162|zinc finger protein 189
mm9_v1_chr14_+_61791811_61791874	0.0299021	NFIX.p2	AK053626|Sacs|50720|sacsin	AK052467|Sacs|50720|sacsin
mm9_v1_chr18_+_75178416_75178439	0.0295016	NFIX.p2	NM_027727|Dym|69190|dymeclin	AK081242|Dym|69190|dymeclin	BC038276|Dym|69190|dymeclin	AK154794|Dym|69190|dymeclin	BC092283|Dym|69190|dymeclin
mm9_v1_chr9_-_123626642_123626742	0.0283794	NFIX.p2	AK046515|Lztfl1|93730|leucine zipper transcription factor-like 1	BC037045|Lztfl1|93730|leucine zipper transcription factor-like 1	AJ297352|Lztfl1|93730|leucine zipper transcription factor-like 1	BC098224|Lztfl1|93730|leucine zipper transcription factor-like 1	BC026840|Lztfl1|93730|leucine zipper transcription factor-like 1	NM_033322|Lztfl1|93730|leucine zipper transcription factor-like 1	AK054003|Lztfl1|93730|leucine zipper transcription factor-like 1	AK157770|Lztfl1|93730|leucine zipper transcription factor-like 1	AK145263|Lztfl1|93730|leucine zipper transcription factor-like 1	AK030068|Lztfl1|93730|leucine zipper transcription factor-like 1	AK029671|Lztfl1|93730|leucine zipper transcription factor-like 1	AK041091|Lztfl1|93730|leucine zipper transcription factor-like 1	AK147312|Lztfl1|93730|leucine zipper transcription factor-like 1
mm9_v1_chr7_-_150970404_150970404	0.0277101	NFIX.p2	AK133657|Mrgpre|244238|MAS-related GPR, member E	NM_175534|Mrgpre|244238|MAS-related GPR, member E
mm9_v1_chr10_-_75226917_75226983	0.0258033	NFIX.p2	BC039933|Cabin1|104248|calcineurin binding protein 1
mm9_v1_chr17_-_80689434_80689517	0.024773	NFIX.p2	BC079618|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC066091|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	BC065169|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	AK042947|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr9_-_119231439_119231567	0.0226519	NFIX.p2	BC046453|Oxsr1|108737|oxidative-stress responsive 1	BC060645|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr4_-_117354829_117354891	0.0220723	NFIX.p2	AF438610|Dmap1|66233|DNA methyltransferase 1-associated protein 1	NM_023178|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK012055|Dmap1|66233|DNA methyltransferase 1-associated protein 1	AK005270|Dmap1|66233|DNA methyltransferase 1-associated protein 1
mm9_v1_chr16_+_55966458_55966533	0.0192463	NFIX.p2	AK028209|Rpl24|68193|ribosomal protein L24	AK018731|Rpl24|68193|ribosomal protein L24	AK136631|Rpl24|68193|ribosomal protein L24	AK019214|Rpl24|68193|ribosomal protein L24	AK077617|Rpl24|68193|ribosomal protein L24	BC053377|Rpl24|68193|ribosomal protein L24	BC058114|Rpl24|68193|ribosomal protein L24	BC092008|Rpl24|68193|ribosomal protein L24	BC002110|Rpl24|68193|ribosomal protein L24
mm9_v1_chr2_+_121275069_121275180	0.0181916	NFIX.p2	AK010749|Serf2|378702|small EDRK-rich factor 2	BC092136|Serf2|378702|small EDRK-rich factor 2	AK012395|Serf2|378702|small EDRK-rich factor 2	AK132746|Serf2|378702|small EDRK-rich factor 2	AK151362|Serf2|378702|small EDRK-rich factor 2	AK008802|Serf2|378702|small EDRK-rich factor 2	BC081455|Serf2|378702|small EDRK-rich factor 2	AF073297|Serf2|378702|small EDRK-rich factor 2	AK169106|Serf2|378702|small EDRK-rich factor 2	AK012603|Serf2|378702|small EDRK-rich factor 2	AK168858|Serf2|378702|small EDRK-rich factor 2	AK002351|Serf2|378702|small EDRK-rich factor 2	AK018746|Serf2|378702|small EDRK-rich factor 2
mm9_v1_chr2_-_5635228_5635384	0.0173363	NFIX.p2	AK052401|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141413|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID	BC141414|Camk1d|227541|calcium/calmodulin-dependent protein kinase ID
mm9_v1_chr15_+_76709688_76709760	0.0162259	NFIX.p2	BC011501|Zfp7|223669|zinc finger protein 7	NM_145916|Zfp7|223669|zinc finger protein 7	AK144887|Zfp7|223669|zinc finger protein 7	AK038299|Zfp7|223669|zinc finger protein 7	AK143414|Zfp7|223669|zinc finger protein 7	AK168948|Zfp7|223669|zinc finger protein 7	BC062103|Zfp7|223669|zinc finger protein 7
mm9_v1_chr7_+_149719017_149719083	0.0162058	NFIX.p2	NM_011288|Mrpl23|19935|mitochondrial ribosomal protein L23	AB049646|Mrpl23|19935|mitochondrial ribosomal protein L23	BC038626|Mrpl23|19935|mitochondrial ribosomal protein L23	AK086805|Mrpl23|19935|mitochondrial ribosomal protein L23	U84902|Mrpl23|19935|mitochondrial ribosomal protein L23	BC081460|Mrpl23|19935|mitochondrial ribosomal protein L23
mm9_v1_chr14_-_26746646_26746735	0.015839	NFIX.p2	AK003554|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	AK008299|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	AK002342|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed	NM_025311|D14Ertd449e|66039|DNA segment, Chr 14, ERATO Doi 449, expressed
mm9_v1_chr1_-_82583400_82583423	0.0151298	NFIX.p2	AK164732|Col4a4|12829|collagen, type IV, alpha 4	NM_007735|Col4a4|12829|collagen, type IV, alpha 4
mm9_v1_chr11_-_59850365_59850382	0.0147107	NFIX.p2	AY334571|Pemt|18618|phosphatidylethanolamine N-methyltransferase
mm9_v1_chrX_+_12858142_12858215	0.0144252	NFIX.p2	AK140990|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	NM_010028|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	Z38117|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	AK163250|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	BC150862|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	BC172016|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	L25126|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr14_+_33015323_33015405	0.0139052	NFIX.p2	AF079557|Parg|26430|poly (ADP-ribose) glycohydrolase
mm9_v1_chr10_-_6606128_6606213	0.0106989	NFIX.p2	AK033676|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	AK034403|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	NM_001159942|Plekhg1|213783|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm9_v1_chr16_-_96303958_96304070	0.00425227	NFIX.p2	BC095940|Brwd1|93871|bromodomain and WD repeat domain containing 1	BC145265|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292467|Brwd1|93871|bromodomain and WD repeat domain containing 1	AJ292468|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK030493|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_001103179|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_145125|Brwd1|93871|bromodomain and WD repeat domain containing 1	NM_176928|Brwd1|93871|bromodomain and WD repeat domain containing 1	AK051870|Brwd1|93871|bromodomain and WD repeat domain containing 1
mm9_v1_chr1_-_121970345_121970394	0.00359002	NFIX.p2	BC024613|Tmem37|170706|transmembrane protein 37	AK050134|Tmem37|170706|transmembrane protein 37	NM_019432|Tmem37|170706|transmembrane protein 37	AK086093|Tmem37|170706|transmembrane protein 37	AK002424|Tmem37|170706|transmembrane protein 37
mm9_v1_chr11_-_43239482_43239482	0.000156298	NFIX.p2	AF069051|Pttg1|30939|pituitary tumor-transforming gene 1	AF071209|Pttg1|30939|pituitary tumor-transforming gene 1	NM_013917|Pttg1|30939|pituitary tumor-transforming gene 1
