mm9_v1_chrX_+_104284572_104284678	22.6406	NKX2-1,4.p2	AK038124|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK041351|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK088234|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	NM_172435|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	BC053707|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10
mm9_v1_chr18_-_9995729_9995838	15.031	NKX2-1,4.p2	AK206781|Usp14|59025|ubiquitin specific peptidase 14	AK209109|Usp14|59025|ubiquitin specific peptidase 14
mm9_v1_chr15_-_102062309_102062327	14.139	NKX2-1,4.p2	M95632|Itgb7|16421|integrin beta 7	M95633|Itgb7|16421|integrin beta 7	M68903|Itgb7|16421|integrin beta 7
mm9_v1_chr6_-_122560002_122560015	13.9903	NKX2-1,4.p2	BC103565|Gdf3|14562|growth differentiation factor 3	BC101963|Gdf3|14562|growth differentiation factor 3	BC101964|Gdf3|14562|growth differentiation factor 3	BC101965|Gdf3|14562|growth differentiation factor 3	AK082877|Gdf3|14562|growth differentiation factor 3	AK146174|Gdf3|14562|growth differentiation factor 3	AK167962|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr7_-_31663995_31664046	12.7589	NKX2-1,4.p2	AK172301|Cd22|12483|CD22 antigen	AK156735|Cd22|12483|CD22 antigen	NM_009845|Cd22|12483|CD22 antigen
mm9_v1_chr10_+_7552260_7552267	11.9224	NKX2-1,4.p2	AK052806|Zc3h12d|237256|zinc finger CCCH type containing 12D	NM_172785|Zc3h12d|237256|zinc finger CCCH type containing 12D
mm9_v1_chr3_+_116564564_116564609	11.4653	NKX2-1,4.p2	NM_009146|Frrs1|20321|ferric-chelate reductase 1	AK075573|Frrs1|20321|ferric-chelate reductase 1	AK144933|Frrs1|20321|ferric-chelate reductase 1	AK162693|Frrs1|20321|ferric-chelate reductase 1	D50464|Frrs1|20321|ferric-chelate reductase 1
mm9_v1_chr6_-_122560022_122560104	10.9963	NKX2-1,4.p2	S52658|Gdf3|14562|growth differentiation factor 3	AK160533|Gdf3|14562|growth differentiation factor 3	AK152457|Gdf3|14562|growth differentiation factor 3	NM_008108|Gdf3|14562|growth differentiation factor 3	L06443|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr15_-_102062331_102062365	9.60724	NKX2-1,4.p2	AK155207|Itgb7|16421|integrin beta 7	AK155594|Itgb7|16421|integrin beta 7	AK144773|Itgb7|16421|integrin beta 7	BC011184|Itgb7|16421|integrin beta 7	AK078871|Itgb7|16421|integrin beta 7	AK154766|Itgb7|16421|integrin beta 7	NM_013566|Itgb7|16421|integrin beta 7
mm9_v1_chr5_-_65323937_65324139	9.56408	NKX2-1,4.p2	AY009154|Tlr1|21897|toll-like receptor 1	NM_030682|Tlr1|21897|toll-like receptor 1	BC141319|Tlr1|21897|toll-like receptor 1	BC141321|Tlr1|21897|toll-like receptor 1
mm9_v1_chr8_-_8666771_8666782	9.46133	NKX2-1,4.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr7_-_53971038_53971045	8.68516	NKX2-1,4.p2	BC055885|Saa3|20210|serum amyloid A 3	NM_011315|Saa3|20210|serum amyloid A 3
mm9_v1_chr15_-_78603874_78603911	7.72804	NKX2-1,4.p2	NM_008595|Mfng|17305|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	U94349|Mfng|17305|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	BC010983|Mfng|17305|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	AK143523|Mfng|17305|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
mm9_v1_chr15_-_78403110_78403220	7.71813	NKX2-1,4.p2	X53247|Rac2|19354|RAS-related C3 botulinum substrate 2	BC005455|Rac2|19354|RAS-related C3 botulinum substrate 2	AK007561|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088805|Rac2|19354|RAS-related C3 botulinum substrate 2	AK144136|Rac2|19354|RAS-related C3 botulinum substrate 2	AK088415|Rac2|19354|RAS-related C3 botulinum substrate 2	AK011045|Rac2|19354|RAS-related C3 botulinum substrate 2	AK171321|Rac2|19354|RAS-related C3 botulinum substrate 2	NM_009008|Rac2|19354|RAS-related C3 botulinum substrate 2
mm9_v1_chr17_+_88382830_88382866	7.65263	NKX2-1,4.p2	BC035274|Msh6|17688|mutS homolog 6 (E. coli)
mm9_v1_chr10_+_87553816_87553819	7.63437	NKX2-1,4.p2	AK138363|Pmch|110312|pro-melanin-concentrating hormone	BC048534|Pmch|110312|pro-melanin-concentrating hormone	NM_029971|Pmch|110312|pro-melanin-concentrating hormone	AK020723|Pmch|110312|pro-melanin-concentrating hormone
mm9_v1_chr2_-_73291933_73291985	7.53175	NKX2-1,4.p2	AK156547|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr2_+_61642509_61642690	7.24891	NKX2-1,4.p2	BC052737|Tbr1|21375|T-box brain gene 1	NM_009322|Tbr1|21375|T-box brain gene 1	AK158835|Tbr1|21375|T-box brain gene 1	BC058399|Tbr1|21375|T-box brain gene 1	U49251|Tbr1|21375|T-box brain gene 1
mm9_v1_chr13_-_108516475_108516490	7.20549	NKX2-1,4.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr17_-_57333491_57333608	7.0238	NKX2-1,4.p2	AF123385|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AF227533|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125477|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	BC125479|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	AB029155|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14	NM_019418|Tnfsf14|50930|tumor necrosis factor (ligand) superfamily, member 14
mm9_v1_chr1_+_87546558_87546676	6.64166	NKX2-1,4.p2	AK042095|Sp100|20684|nuclear antigen Sp100	AK080004|Sp100|20684|nuclear antigen Sp100	AK152348|Sp100|20684|nuclear antigen Sp100	U83630|Sp100|20684|nuclear antigen Sp100	AK146054|Sp100|20684|nuclear antigen Sp100	AK153487|Sp100|20684|nuclear antigen Sp100	BC069183|Sp100|20684|nuclear antigen Sp100	AK083304|Sp100|20684|nuclear antigen Sp100	NM_013673|Sp100|20684|nuclear antigen Sp100	CT010199|Sp100|20684|nuclear antigen Sp100	U83636|Sp100|20684|nuclear antigen Sp100
mm9_v1_chr9_+_55937776_55937786	5.83295	NKX2-1,4.p2	X96700|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1	AK037936|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1	AK088150|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1	NM_011193|Pstpip1|19200|proline-serine-threonine phosphatase-interacting protein 1
mm9_v1_chr11_+_87895626_87895848	5.55094	NKX2-1,4.p2	AK079148|Vezf1|22344|vascular endothelial zinc finger 1	AK018086|Vezf1|22344|vascular endothelial zinc finger 1
mm9_v1_chr8_-_127363674_127363689	5.52585	NKX2-1,4.p2	
mm9_v1_chr3_-_15575064_15575064	5.52578	NKX2-1,4.p2	AK154879|Sirpb1b|668101|signal-regulatory protein beta 1B	NM_001173460|Sirpb1b|668101|signal-regulatory protein beta 1B
mm9_v1_chr6_+_39331379_39331426	5.45119	NKX2-1,4.p2	AK017590|Rab19|19331|RAB19, member RAS oncogene family	BC032936|Rab19|19331|RAB19, member RAS oncogene family	NM_011226|Rab19|19331|RAB19, member RAS oncogene family
mm9_v1_chr9_+_89094110_89094142	5.41221	NKX2-1,4.p2	BC116241|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	NM_007534|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	BC028762|Bcl2a1a|12044|B-cell leukemia/lymphoma 2 related protein A1a	AK138369|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	BC100462|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b	AK152200|Bcl2a1b|12045|B-cell leukemia/lymphoma 2 related protein A1b
mm9_v1_chr4_-_142718290_142718420	5.26195	NKX2-1,4.p2	AK136099|Prdm2|110593|PR domain containing 2, with ZNF domain
mm9_v1_chr2_-_29103559_29103618	5.11511	NKX2-1,4.p2	AB052336|Ntng2|171171|netrin G2	AB052337|Ntng2|171171|netrin G2	AB052338|Ntng2|171171|netrin G2	AF475079|Ntng2|171171|netrin G2	AF475080|Ntng2|171171|netrin G2	NM_133500|Ntng2|171171|netrin G2	NM_133501|Ntng2|171171|netrin G2	BC141258|Ntng2|171171|netrin G2	BC145600|Ntng2|171171|netrin G2
mm9_v1_chr17_+_34726750_34726889	5.02617	NKX2-1,4.p2	AK155617|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	NM_134116|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	AK146245|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC085186|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	AK144833|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)	BC080804|Gpsm3|106512|G-protein signalling modulator 3 (AGS3-like, C. elegans)
mm9_v1_chr14_-_56880985_56881096	4.84264	NKX2-1,4.p2	CT010272|Gzmb|14939|granzyme B	M12302|Gzmb|14939|granzyme B	AK167770|Gzmb|14939|granzyme B	AK157856|Gzmb|14939|granzyme B	BC002085|Gzmb|14939|granzyme B	NM_013542|Gzmb|14939|granzyme B	X04072|Gzmb|14939|granzyme B
mm9_v1_chr9_-_43951401_43951528	4.48652	NKX2-1,4.p2	
mm9_v1_chr1_-_172906094_172906244	4.4615	NKX2-1,4.p2	M14276|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	U51629|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	M17515|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	M14216|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	BC011305|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	BC019758|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	BC038070|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	AK171316|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	AK170035|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	AK155329|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	AK171254|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	AK080885|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	AK089266|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	AK150613|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	NM_001077189|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb	NM_010187|Fcgr2b|14130|Fc receptor, IgG, low affinity IIb
mm9_v1_chr7_+_135273060_135273088	4.33149	NKX2-1,4.p2	AK155816|Itgax|16411|integrin alpha X	AK089167|Itgax|16411|integrin alpha X	AK170432|Itgax|16411|integrin alpha X	AK131133|Itgax|16411|integrin alpha X	BC042840|Itgax|16411|integrin alpha X	AF211864|Itgax|16411|integrin alpha X	NM_021334|Itgax|16411|integrin alpha X	BC057200|Itgax|16411|integrin alpha X
mm9_v1_chr4_-_120597563_120597650	4.03834	NKX2-1,4.p2	BC023360|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	AK014134|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_001160043|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)	NM_028457|Dem1|73172|defects in morphology 1 homolog (S. cerevisiae)
mm9_v1_chr9_-_113563906_113564041	3.96994	NKX2-1,4.p2	AK199870|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr17_+_8428907_8428907	3.88521	NKX2-1,4.p2	NM_001190333|Ccr6|12458|chemokine (C-C motif) receptor 6
mm9_v1_chr9_-_88626434_88626600	3.87545	NKX2-1,4.p2	AK165576|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d	BC027536|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d
mm9_v1_chr1_-_181682859_181682906	3.79867	NKX2-1,4.p2	AK016646|Ahctf1|226747|AT hook containing transcription factor 1
mm9_v1_chr3_+_125106995_125107008	3.7854	NKX2-1,4.p2	AF520870|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	AK140992|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	NM_022565|Ndst4|64580|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm9_v1_chr15_+_98885599_98885611	3.72338	NKX2-1,4.p2	AK149021|Prph|19132|peripherin	NM_001163588|Prph|19132|peripherin	NM_001163589|Prph|19132|peripherin	NM_013639|Prph|19132|peripherin	BC046291|Prph|19132|peripherin
mm9_v1_chr9_-_44550590_44550598	3.70164	NKX2-1,4.p2	
mm9_v1_chr3_+_87924435_87924571	3.69239	NKX2-1,4.p2	BC022774|Iqgap3|404710|IQ motif containing GTPase activating protein 3
mm9_v1_chr7_-_90883999_90884032	3.66692	NKX2-1,4.p2	AF175292|Il16|16170|interleukin 16	NM_010551|Il16|16170|interleukin 16	AK220455|Il16|16170|interleukin 16	BC058709|Il16|16170|interleukin 16
mm9_v1_chr9_-_88626613_88626700	3.62201	NKX2-1,4.p2	BC116240|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d	NM_007536|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d	BC053965|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d
mm9_v1_chr2_+_139996381_139996403	3.6215	NKX2-1,4.p2	NM_027093|2310003L22Rik|69487|RIKEN cDNA 2310003L22 gene
mm9_v1_chr7_+_11983263_11983263	3.55362	NKX2-1,4.p2	AK141250|Zscan4f|665902|zinc finger and SCAN domain containing 4F	NM_001110316|Zscan4f|665902|zinc finger and SCAN domain containing 4F
mm9_v1_chr9_-_14708327_14708394	3.51082	NKX2-1,4.p2	AK041596|Folr4|64931|folate receptor 4 (delta)	AF250145|Folr4|64931|folate receptor 4 (delta)	BC028431|Folr4|64931|folate receptor 4 (delta)	AK083306|Folr4|64931|folate receptor 4 (delta)	NM_022888|Folr4|64931|folate receptor 4 (delta)	NM_176807|Folr4|64931|folate receptor 4 (delta)
mm9_v1_chr7_-_11896030_11896030	3.50244	NKX2-1,4.p2	NM_001161802|Zscan4e|665848|zinc finger and SCAN domain containing 4E
mm9_v1_chr1_+_173697246_173697357	3.50153	NKX2-1,4.p2	AK020012|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK156445|Slamf1|27218|signaling lymphocytic activation molecule family member 1	NM_013730|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK172138|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK037780|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AK036429|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF160990|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149791|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AF149792|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117095|Slamf1|27218|signaling lymphocytic activation molecule family member 1	BC117099|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196796|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196797|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196798|Slamf1|27218|signaling lymphocytic activation molecule family member 1	AB196799|Slamf1|27218|signaling lymphocytic activation molecule family member 1
mm9_v1_chr11_-_79056525_79056525	3.4572	NKX2-1,4.p2	AK048511|Wsb1|78889|WD repeat and SOCS box-containing 1	NM_001042565|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr12_-_101397818_101397862	3.43948	NKX2-1,4.p2	AK036688|BC002230|217827|cDNA sequence BC002230	AK032800|BC002230|217827|cDNA sequence BC002230	NM_183155|BC002230|217827|cDNA sequence BC002230
mm9_v1_chr7_-_11490398_11490398	3.4275	NKX2-1,4.p2	NM_001185173|Zscan4b|665780|zinc finger and SCAN domain containing 4B
mm9_v1_chr6_-_69494873_69494938	3.38952	NKX2-1,4.p2	J04610|Igkv4-57-1|384514|immunoglobulin kappa variable 4-57-1
mm9_v1_chr10_+_80291835_80291840	3.32629	NKX2-1,4.p2	
mm9_v1_chr1_-_75132608_75132617	3.28748	NKX2-1,4.p2	AK188612|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK199117|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK200010|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK210625|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr7_+_29666674_29666675	3.2762	NKX2-1,4.p2	AJ289243|Capn12|60594|calpain 12	NM_001110807|Capn12|60594|calpain 12	BC028751|Capn12|60594|calpain 12
mm9_v1_chr9_+_88851757_88851833	3.21272	NKX2-1,4.p2	L16462|Bcl2a1a|12044|B-cell leukemia/lymphoma 2 related protein A1a	NM_009742|Bcl2a1a|12044|B-cell leukemia/lymphoma 2 related protein A1a
mm9_v1_chr2_+_129838084_129838109	3.20918	NKX2-1,4.p2	L10385|Tgm3|21818|transglutaminase 3, E polypeptide	BC129890|Tgm3|21818|transglutaminase 3, E polypeptide	BC129891|Tgm3|21818|transglutaminase 3, E polypeptide	NM_009374|Tgm3|21818|transglutaminase 3, E polypeptide
mm9_v1_chr11_+_117864696_117864817	3.1809	NKX2-1,4.p2	BC022918|Pgs1|74451|phosphatidylglycerophosphate synthase 1
mm9_v1_chr9_-_21035212_21035311	3.15093	NKX2-1,4.p2	AK178920|Keap1|50868|kelch-like ECH-associated protein 1	AK200527|Keap1|50868|kelch-like ECH-associated protein 1
mm9_v1_chrX_+_104871850_104871850	3.11469	NKX2-1,4.p2	AK084312|Tbx22|245572|T-box 22	NM_145224|Tbx22|245572|T-box 22
mm9_v1_chr5_+_53946944_53947017	2.95496	NKX2-1,4.p2	AY512934|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region	NM_001080928|Rbpj|19664|recombination signal binding protein for immunoglobulin kappa J region
mm9_v1_chr4_+_99322989_99322989	2.92948	NKX2-1,4.p2	AF067421|Foxd3|15221|forkhead box D3	NM_010425|Foxd3|15221|forkhead box D3	U41047|Foxd3|15221|forkhead box D3
mm9_v1_chr7_-_88711829_88711866	2.92136	NKX2-1,4.p2	AK036674|Fsd2|244091|fibronectin type III and SPRY domain containing 2	AK028142|Fsd2|244091|fibronectin type III and SPRY domain containing 2	NM_172904|Fsd2|244091|fibronectin type III and SPRY domain containing 2
mm9_v1_chr16_+_89206105_89206105	2.83366	NKX2-1,4.p2	AK004483|Krtap20-2|622935|keratin associated protein 20-2	NM_001163615|Krtap20-2|622935|keratin associated protein 20-2
mm9_v1_chrX_+_98494487_98494551	2.82176	NKX2-1,4.p2	NM_172932|Nlgn3|245537|neuroligin 3	AK039018|Nlgn3|245537|neuroligin 3
mm9_v1_chr14_-_49282546_49282546	2.80355	NKX2-1,4.p2	BC017609|Otx2|18424|orthodenticle homolog 2 (Drosophila)	NM_144841|Otx2|18424|orthodenticle homolog 2 (Drosophila)
mm9_v1_chr4_-_136891931_136891995	2.78378	NKX2-1,4.p2	AK213611|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	M79301|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L11318|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L78075|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr17_+_87762817_87762839	2.77944	NKX2-1,4.p2	BC057906|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr6_-_69651268_69651335	2.76532	NKX2-1,4.p2	
mm9_v1_chr3_+_93197619_93197620	2.72448	NKX2-1,4.p2	AK009453|Rptn|20129|repetin	NM_009100|Rptn|20129|repetin
mm9_v1_chr5_-_121199781_121199885	2.70549	NKX2-1,4.p2	AF418010|Oas2|246728|2'-5' oligoadenylate synthetase 2	BC118538|Oas2|246728|2'-5' oligoadenylate synthetase 2	NM_145227|Oas2|246728|2'-5' oligoadenylate synthetase 2	AB067535|Oas2|246728|2'-5' oligoadenylate synthetase 2
mm9_v1_chr17_+_33692639_33692778	2.68662	NKX2-1,4.p2	NM_053214|Myo1f|17916|myosin IF	BC046502|Myo1f|17916|myosin IF	AK153908|Myo1f|17916|myosin IF	X97650|Myo1f|17916|myosin IF	AK158333|Myo1f|17916|myosin IF
mm9_v1_chr16_+_26463220_26463558	2.66584	NKX2-1,4.p2	AK085268|Cldn16|114141|claudin 16	NM_053241|Cldn16|114141|claudin 16	AK085333|Cldn16|114141|claudin 16	BC115574|Cldn16|114141|claudin 16	BC115575|Cldn16|114141|claudin 16	AF323748|Cldn16|114141|claudin 16	AB009016|Cldn16|114141|claudin 16
mm9_v1_chr1_+_40572206_40572292	2.65858	NKX2-1,4.p2	AF077347|Il18rap|16174|interleukin 18 receptor accessory protein	BC120598|Il18rap|16174|interleukin 18 receptor accessory protein	BC120600|Il18rap|16174|interleukin 18 receptor accessory protein	NM_010553|Il18rap|16174|interleukin 18 receptor accessory protein	AK137541|Il18rap|16174|interleukin 18 receptor accessory protein	AK053176|Il18rap|16174|interleukin 18 receptor accessory protein
mm9_v1_chr11_-_99471502_99471502	2.65348	NKX2-1,4.p2	NM_001099346|Gm11937|100041488|predicted gene 11937
mm9_v1_chr1_-_65109982_65110015	2.61003	NKX2-1,4.p2	K02583|Crygd|12967|crystallin, gamma D	BC057013|Crygd|12967|crystallin, gamma D	AK136286|Crygd|12967|crystallin, gamma D	BC132116|Crygd|12967|crystallin, gamma D	BC132118|Crygd|12967|crystallin, gamma D	NM_007776|Crygd|12967|crystallin, gamma D
mm9_v1_chr16_-_38445988_38446143	2.6054	NKX2-1,4.p2	AK003751|Adprh|11544|ADP-ribosylarginine hydrolase
mm9_v1_chr3_+_89324085_89324085	2.59904	NKX2-1,4.p2	AK137738|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK170218|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_080466|Kcnn3|140493|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm9_v1_chr2_-_156754104_156754212	2.58891	NKX2-1,4.p2	AK183588|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr1_-_75132977_75133049	2.57243	NKX2-1,4.p2	AK209717|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK183285|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK180897|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr5_+_97520188_97520241	2.51045	NKX2-1,4.p2	AK132786|Bmp2k|140780|BMP2 inducible kinase
mm9_v1_chr2_+_180447250_180447250	2.50505	NKX2-1,4.p2	BC059022|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene	NM_029607|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene
mm9_v1_chr7_-_34977928_34978057	2.49901	NKX2-1,4.p2	BC025090|Pdcd2l|68079|programmed cell death 2-like	BC038524|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr18_+_32416881_32416904	2.45758	NKX2-1,4.p2	BC024446|Ercc3|13872|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm9_v1_chr8_+_97269489_97269622	2.38903	NKX2-1,4.p2	AF052505|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155083|Ccl22|20299|chemokine (C-C motif) ligand 22	AK156627|Ccl22|20299|chemokine (C-C motif) ligand 22	AK170080|Ccl22|20299|chemokine (C-C motif) ligand 22	NM_009137|Ccl22|20299|chemokine (C-C motif) ligand 22	AK155764|Ccl22|20299|chemokine (C-C motif) ligand 22	BC012658|Ccl22|20299|chemokine (C-C motif) ligand 22	AF076596|Ccl22|20299|chemokine (C-C motif) ligand 22	AJ238238|Ccl22|20299|chemokine (C-C motif) ligand 22	AF163476|Ccl22|20299|chemokine (C-C motif) ligand 22
mm9_v1_chr10_-_61885155_61885204	2.37863	NKX2-1,4.p2	AK044665|Hkdc1|216019|hexokinase domain containing 1	AK145980|Hkdc1|216019|hexokinase domain containing 1	BC016235|Hkdc1|216019|hexokinase domain containing 1	NM_145419|Hkdc1|216019|hexokinase domain containing 1
mm9_v1_chr12_+_87027595_87027673	2.35032	NKX2-1,4.p2	AK018587|Batf|53314|basic leucine zipper transcription factor, ATF-like	AF017021|Batf|53314|basic leucine zipper transcription factor, ATF-like	NM_016767|Batf|53314|basic leucine zipper transcription factor, ATF-like
mm9_v1_chr4_+_123613778_123613862	2.34694	NKX2-1,4.p2	AK003876|Rragc|54170|Ras-related GTP binding C	AK196968|Rragc|54170|Ras-related GTP binding C	AK177349|Rragc|54170|Ras-related GTP binding C	AK196201|Rragc|54170|Ras-related GTP binding C	AK204008|Rragc|54170|Ras-related GTP binding C	AK213206|Rragc|54170|Ras-related GTP binding C
mm9_v1_chr7_-_133514716_133514787	2.3455	NKX2-1,4.p2	AK201150|Spns1|73658|spinster homolog 1 (Drosophila)
mm9_v1_chr9_+_7272513_7272544	2.34544	NKX2-1,4.p2	BC125320|Mmp13|17386|matrix metallopeptidase 13	BC125322|Mmp13|17386|matrix metallopeptidase 13	NM_008607|Mmp13|17386|matrix metallopeptidase 13	AK150728|Mmp13|17386|matrix metallopeptidase 13	AK151626|Mmp13|17386|matrix metallopeptidase 13	AK152916|Mmp13|17386|matrix metallopeptidase 13	AK153458|Mmp13|17386|matrix metallopeptidase 13	AK155188|Mmp13|17386|matrix metallopeptidase 13	AK152507|Mmp13|17386|matrix metallopeptidase 13	AK159921|Mmp13|17386|matrix metallopeptidase 13	AK160819|Mmp13|17386|matrix metallopeptidase 13	X66473|Mmp13|17386|matrix metallopeptidase 13
mm9_v1_chrX_+_146029143_146029143	2.32825	NKX2-1,4.p2	BC109132|Gm10439|382243|predicted gene 10439	NM_001037716|Gm10439|382243|predicted gene 10439
mm9_v1_chr6_-_69367406_69367460	2.32471	NKX2-1,4.p2	DQ372799|Igkv4-68|384515|immunoglobulin kappa variable 4-68
mm9_v1_chr7_-_147174332_147174467	2.29395	NKX2-1,4.p2	AK134118|Adam8|11501|a disintegrin and metallopeptidase domain 8	AK151535|Adam8|11501|a disintegrin and metallopeptidase domain 8
mm9_v1_chr7_+_3336653_3336684	2.28404	NKX2-1,4.p2	BC141277|Cacng7|81904|calcium channel, voltage-dependent, gamma subunit 7	AF361349|Cacng7|81904|calcium channel, voltage-dependent, gamma subunit 7	AF458899|Cacng7|81904|calcium channel, voltage-dependent, gamma subunit 7	NM_133189|Cacng7|81904|calcium channel, voltage-dependent, gamma subunit 7
mm9_v1_chr7_+_54110611_54110615	2.27646	NKX2-1,4.p2	AK200978|Ldha|16828|lactate dehydrogenase A
mm9_v1_chr4_-_129250806_129250884	2.21956	NKX2-1,4.p2	M23192|Lck|16818|lymphocyte protein tyrosine kinase	BC011474|Lck|16818|lymphocyte protein tyrosine kinase	NM_001162433|Lck|16818|lymphocyte protein tyrosine kinase
mm9_v1_chr13_+_35751730_35751781	2.21506	NKX2-1,4.p2	NM_009881|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081260|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081261|Cdyl|12593|chromodomain protein, Y chromosome-like	BC055103|Cdyl|12593|chromodomain protein, Y chromosome-like
mm9_v1_chr6_-_69557773_69557830	2.20669	NKX2-1,4.p2	
mm9_v1_chr3_+_95465860_95465866	2.18324	NKX2-1,4.p2	AK160634|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr2_+_154374639_154374777	2.17022	NKX2-1,4.p2	AK005633|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	DQ080431|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	NM_029305|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	BC147532|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	BC147533|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene	BC039797|1700003F12Rik|75480|RIKEN cDNA 1700003F12 gene
mm9_v1_chr8_+_97835414_97835512	2.16668	NKX2-1,4.p2	NM_199455|Tepp|73407|testis, prostate and placenta expressed	BC104382|Tepp|73407|testis, prostate and placenta expressed	BC104383|Tepp|73407|testis, prostate and placenta expressed	BC087870|Tepp|73407|testis, prostate and placenta expressed	AK006802|Tepp|73407|testis, prostate and placenta expressed	NM_028532|Tepp|73407|testis, prostate and placenta expressed
mm9_v1_chr1_-_184246785_184246786	2.13827	NKX2-1,4.p2	AK028774|Fbxo28|67948|F-box protein 28
mm9_v1_chr11_+_30854464_30854475	2.13293	NKX2-1,4.p2	AK143580|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chr9_+_7792286_7792314	2.1196	NKX2-1,4.p2	AK150630|Tmem123|71929|transmembrane protein 123
mm9_v1_chr6_+_123179860_123179891	2.11883	NKX2-1,4.p2	NM_001190320|Clec4n|56620|C-type lectin domain family 4, member n	NM_001190321|Clec4n|56620|C-type lectin domain family 4, member n	NM_020001|Clec4n|56620|C-type lectin domain family 4, member n	AK089166|Clec4n|56620|C-type lectin domain family 4, member n	AK131697|Clec4n|56620|C-type lectin domain family 4, member n	AK154673|Clec4n|56620|C-type lectin domain family 4, member n	AK171046|Clec4n|56620|C-type lectin domain family 4, member n	AF240357|Clec4n|56620|C-type lectin domain family 4, member n	AF240358|Clec4n|56620|C-type lectin domain family 4, member n	AF240359|Clec4n|56620|C-type lectin domain family 4, member n	BC023008|Clec4n|56620|C-type lectin domain family 4, member n
mm9_v1_chrX_+_145098146_145098171	2.10272	NKX2-1,4.p2	NM_001114400|Gm15127|434866|predicted gene 15127	BC109132|Gm10439|382243|predicted gene 10439
mm9_v1_chr14_-_51875785_51875786	2.09413	NKX2-1,4.p2	BC020070|Ear11|93726|eosinophil-associated, ribonuclease A family, member 11	BC027557|Ear11|93726|eosinophil-associated, ribonuclease A family, member 11	NM_053113|Ear11|93726|eosinophil-associated, ribonuclease A family, member 11
mm9_v1_chr13_-_58456221_58456222	2.08959	NKX2-1,4.p2	BC116646|Kif27|75050|kinesin family member 27	NM_175214|Kif27|75050|kinesin family member 27
mm9_v1_chr11_+_100442831_100442963	2.08098	NKX2-1,4.p2	AK217119|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr18_+_3435267_3435359	2.07928	NKX2-1,4.p2	AK162910|Cul2|71745|cullin 2
mm9_v1_chrX_-_140367467_140367853	2.02683	NKX2-1,4.p2	AY560329|Dcx|13193|doublecortin	AK048410|Dcx|13193|doublecortin	AF045547|Dcx|13193|doublecortin	AK164119|Dcx|13193|doublecortin	BC056391|Dcx|13193|doublecortin	AK049050|Dcx|13193|doublecortin	NM_001110222|Dcx|13193|doublecortin	BC057010|Dcx|13193|doublecortin	BC062974|Dcx|13193|doublecortin	AK014264|Dcx|13193|doublecortin	NM_001110223|Dcx|13193|doublecortin	NM_001110224|Dcx|13193|doublecortin	NM_010025|Dcx|13193|doublecortin	AB011678|Dcx|13193|doublecortin
mm9_v1_chrX_-_93488752_93488780	2.01178	NKX2-1,4.p2	BC025105|Vsig4|278180|V-set and immunoglobulin domain containing 4	AK041014|Vsig4|278180|V-set and immunoglobulin domain containing 4	NM_177789|Vsig4|278180|V-set and immunoglobulin domain containing 4
mm9_v1_chr17_-_51965912_51965912	2.00735	NKX2-1,4.p2	NM_001163631|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr7_-_91827857_91827907	2.00032	NKX2-1,4.p2	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr9_+_122481617_122481627	1.9926	NKX2-1,4.p2	AK048438|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK049978|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK079255|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK084074|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene	AK135014|9530059O14Rik|319626|RIKEN cDNA 9530059O14 gene
mm9_v1_chr5_-_138605998_138606089	1.99069	NKX2-1,4.p2	
mm9_v1_chr3_-_15426426_15426426	1.98888	NKX2-1,4.p2	AB112022|Sirpb1a|320832|signal-regulatory protein beta 1A	NM_001002898|Sirpb1a|320832|signal-regulatory protein beta 1A
mm9_v1_chr6_-_69193672_69193737	1.96993	NKX2-1,4.p2	
mm9_v1_chr12_-_86097674_86097704	1.94269	NKX2-1,4.p2	AK212383|Npc2|67963|Niemann Pick type C2	AK216457|Npc2|67963|Niemann Pick type C2
mm9_v1_chr6_-_69599335_69599382	1.871	NKX2-1,4.p2	
mm9_v1_chr19_+_38207270_38207270	1.85902	NKX2-1,4.p2	BC027050|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime	NM_001170959|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime	NM_033614|Pde6c|110855|phosphodiesterase 6C, cGMP specific, cone, alpha prime
mm9_v1_chr2_+_153956082_153956082	1.82582	NKX2-1,4.p2	AK006829|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene	BC049691|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene	NM_028528|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene
mm9_v1_chr9_+_123428782_123429096	1.81038	NKX2-1,4.p2	AK212865|Limd1|29806|LIM domains containing 1	AK218834|Limd1|29806|LIM domains containing 1	AK213065|Limd1|29806|LIM domains containing 1	AK214169|Limd1|29806|LIM domains containing 1	AK211030|Limd1|29806|LIM domains containing 1
mm9_v1_chr10_+_127669118_127669147	1.78416	NKX2-1,4.p2	BC052884|Timeless|21853|timeless homolog (Drosophila)	NM_001136082|Timeless|21853|timeless homolog (Drosophila)	NM_001164080|Timeless|21853|timeless homolog (Drosophila)	NM_001164081|Timeless|21853|timeless homolog (Drosophila)	AK162012|Timeless|21853|timeless homolog (Drosophila)	AK153838|Timeless|21853|timeless homolog (Drosophila)	BC064788|Timeless|21853|timeless homolog (Drosophila)	AB019001|Timeless|21853|timeless homolog (Drosophila)	AF071506|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr3_-_108707417_108707441	1.75715	NKX2-1,4.p2	AK007374|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr16_+_49913305_49913369	1.73806	NKX2-1,4.p2	AK050387|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr7_-_88049882_88049956	1.73647	NKX2-1,4.p2	BC028490|Nmb|68039|neuromedin B	AK011929|Nmb|68039|neuromedin B	AK014077|Nmb|68039|neuromedin B	NM_026523|Nmb|68039|neuromedin B
mm9_v1_chr1_+_175603760_175603841	1.70941	NKX2-1,4.p2	AK041099|Pydc3|100033459|pyrin domain containing 3	NM_001162938|Pydc3|100033459|pyrin domain containing 3
mm9_v1_chr11_-_101139357_101139490	1.70643	NKX2-1,4.p2	
mm9_v1_chr2_-_34610751_34610751	1.69844	NKX2-1,4.p2	BC060123|Gapvd1|66691|GTPase activating protein and VPS9 domains 1	NM_025709|Gapvd1|66691|GTPase activating protein and VPS9 domains 1
mm9_v1_chr17_+_31432427_31432427	1.68586	NKX2-1,4.p2	BC027294|Slc37a1|224674|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	NM_153062|Slc37a1|224674|solute carrier family 37 (glycerol-3-phosphate transporter), member 1
mm9_v1_chr4_+_9196439_9196508	1.66152	NKX2-1,4.p2	AK034888|Clvs1|74438|clavesin 1	AK083985|Clvs1|74438|clavesin 1	AK047462|Clvs1|74438|clavesin 1	AK083810|Clvs1|74438|clavesin 1	NM_028940|Clvs1|74438|clavesin 1	AK084350|Clvs1|74438|clavesin 1	AK043072|Clvs1|74438|clavesin 1	AK032549|Clvs1|74438|clavesin 1	BC062923|Clvs1|74438|clavesin 1
mm9_v1_chr17_+_6893421_6893421	1.65247	NKX2-1,4.p2	BC106102|Sytl3|83672|synaptotagmin-like 3	NM_183370|Sytl3|83672|synaptotagmin-like 3
mm9_v1_chr7_+_54110791_54110836	1.63649	NKX2-1,4.p2	
mm9_v1_chr9_+_64809499_64809621	1.63456	NKX2-1,4.p2	AK168222|2010321M09Rik|69882|RIKEN cDNA 2010321M09 gene
mm9_v1_chr9_-_91255831_91255857	1.61024	NKX2-1,4.p2	AK141431|Zic1|22771|zinc finger protein of the cerebellum 1
mm9_v1_chrX_-_70535853_70535853	1.58155	NKX2-1,4.p2	BC119509|Xlr5c|27084|X-linked lymphocyte-regulated 5C	NM_031493|Xlr5c|27084|X-linked lymphocyte-regulated 5C
mm9_v1_chr1_+_87423176_87423243	1.57484	NKX2-1,4.p2	AK156961|Csprs|114564|component of Sp100-rs
mm9_v1_chr8_+_49184445_49184445	1.56843	NKX2-1,4.p2	NM_001161516|Dctd|320685|dCMP deaminase
mm9_v1_chr15_-_72929166_72929248	1.56078	NKX2-1,4.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chr3_+_145784635_145784876	1.55128	NKX2-1,4.p2	AK030819|Mcoln3|171166|mucolipin 3	AK035029|Mcoln3|171166|mucolipin 3	AK033008|Mcoln3|171166|mucolipin 3	AF475086|Mcoln3|171166|mucolipin 3	BC106856|Mcoln3|171166|mucolipin 3	BC106857|Mcoln3|171166|mucolipin 3	NM_134160|Mcoln3|171166|mucolipin 3	AY083531|Mcoln3|171166|mucolipin 3	AK191060|Mcoln3|171166|mucolipin 3	AK202150|Mcoln3|171166|mucolipin 3
mm9_v1_chr11_+_53534295_53534310	1.52022	NKX2-1,4.p2	NM_010558|Il5|16191|interleukin 5	X04601|Il5|16191|interleukin 5	X06270|Il5|16191|interleukin 5	BC125366|Il5|16191|interleukin 5	BC132066|Il5|16191|interleukin 5
mm9_v1_chr15_+_54242324_54242328	1.51001	NKX2-1,4.p2	AB016429|Colec10|239447|collectin sub-family member 10	AK028423|Colec10|239447|collectin sub-family member 10	BC106836|Colec10|239447|collectin sub-family member 10	BC106837|Colec10|239447|collectin sub-family member 10	BC108945|Colec10|239447|collectin sub-family member 10	NM_173422|Colec10|239447|collectin sub-family member 10
mm9_v1_chr3_-_6620440_6620442	1.50408	NKX2-1,4.p2	AK005786|1700008P02Rik|69347|RIKEN cDNA 1700008P02 gene	NM_027048|1700008P02Rik|69347|RIKEN cDNA 1700008P02 gene
mm9_v1_chrX_+_145882159_145882190	1.50229	NKX2-1,4.p2	NM_001122734|Gm15085|100039934|predicted gene 15085	NM_011022|Ott|18422|ovary testis transcribed	X96606|Ott|18422|ovary testis transcribed	BC109131|Gm15107|434864|predicted gene 15107
mm9_v1_chr18_-_61874531_61874583	1.48403	NKX2-1,4.p2	BC024866|Grpel2|17714|GrpE-like 2, mitochondrial
mm9_v1_chr1_-_59220232_59220232	1.47386	NKX2-1,4.p2	AK044682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	NM_001164682|Mpp4|227157|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
mm9_v1_chr6_-_129050920_129050933	1.45786	NKX2-1,4.p2	BC051091|Clec2e|232409|C-type lectin domain family 2, member e	NM_153506|Clec2e|232409|C-type lectin domain family 2, member e
mm9_v1_chr19_+_53218486_53218486	1.42912	NKX2-1,4.p2	BC037116|Add3|27360|adducin 3 (gamma)	NM_013758|Add3|27360|adducin 3 (gamma)
mm9_v1_chr4_-_147808800_147808920	1.42031	NKX2-1,4.p2	
mm9_v1_chr6_+_83068645_83068681	1.4144	NKX2-1,4.p2	AK219549|Mogs|57377|mannosyl-oligosaccharide glucosidase
mm9_v1_chr2_-_28477437_28477507	1.39296	NKX2-1,4.p2	BC132365|Gfi1b|14582|growth factor independent 1B	BC132367|Gfi1b|14582|growth factor independent 1B	BC145238|Gfi1b|14582|growth factor independent 1B	AF017275|Gfi1b|14582|growth factor independent 1B	BC052654|Gfi1b|14582|growth factor independent 1B	NM_001160406|Gfi1b|14582|growth factor independent 1B	NM_008114|Gfi1b|14582|growth factor independent 1B	AK157262|Gfi1b|14582|growth factor independent 1B
mm9_v1_chr7_+_109231629_109231682	1.38531	NKX2-1,4.p2	AF230803|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2	NM_001109897|Trpc2|22064|transient receptor potential cation channel, subfamily C, member 2
mm9_v1_chr3_-_102739990_102740022	1.37986	NKX2-1,4.p2	BC137967|Sycp1|20957|synaptonemal complex protein 1	L41069|Sycp1|20957|synaptonemal complex protein 1	Z38118|Sycp1|20957|synaptonemal complex protein 1	AK015000|Sycp1|20957|synaptonemal complex protein 1	AK133229|Sycp1|20957|synaptonemal complex protein 1	NM_011516|Sycp1|20957|synaptonemal complex protein 1
mm9_v1_chr1_+_108835529_108835558	1.37794	NKX2-1,4.p2	AK040697|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12	AK014669|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12	BC062134|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
mm9_v1_chrX_+_145522857_145522888	1.35766	NKX2-1,4.p2	NM_001122734|Gm15085|100039934|predicted gene 15085	NM_011022|Ott|18422|ovary testis transcribed	X96606|Ott|18422|ovary testis transcribed	BC109131|Gm15107|434864|predicted gene 15107
mm9_v1_chr11_+_3964839_3964931	1.35519	NKX2-1,4.p2	NM_001029937|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC138982|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC138985|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)	BC145485|Sec14l3|380683|SEC14-like 3 (S. cerevisiae)
mm9_v1_chrX_+_144615266_144615297	1.35217	NKX2-1,4.p2	NM_001081648|Gm15107|434864|predicted gene 15107	NM_001122734|Gm15085|100039934|predicted gene 15085	NM_011022|Ott|18422|ovary testis transcribed	X96606|Ott|18422|ovary testis transcribed	BC109131|Gm15107|434864|predicted gene 15107	BC109132|Gm10439|382243|predicted gene 10439
mm9_v1_chr17_+_74898763_74898780	1.34424	NKX2-1,4.p2	AK086213|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr2_+_79547936_79548278	1.33196	NKX2-1,4.p2	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr11_+_85413817_85413884	1.32678	NKX2-1,4.p2	AK078571|7030407E18Rik|399600|RIKEN cDNA 7030407E18 gene
mm9_v1_chr2_+_29917372_29917400	1.3157	NKX2-1,4.p2	AK172327|Set|56086|SET nuclear oncogene	AK014291|Set|56086|SET nuclear oncogene	AK031561|Set|56086|SET nuclear oncogene
mm9_v1_chrX_+_145532494_145532525	1.31356	NKX2-1,4.p2	NM_001122734|Gm15085|100039934|predicted gene 15085	NM_011022|Ott|18422|ovary testis transcribed	X96606|Ott|18422|ovary testis transcribed	BC109131|Gm15107|434864|predicted gene 15107
mm9_v1_chrX_+_144749072_144749103	1.31356	NKX2-1,4.p2	NM_001122734|Gm15085|100039934|predicted gene 15085	NM_011022|Ott|18422|ovary testis transcribed	X96606|Ott|18422|ovary testis transcribed	BC109131|Gm15107|434864|predicted gene 15107
mm9_v1_chr11_+_100442602_100442668	1.28588	NKX2-1,4.p2	AK190081|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase	AK211066|Cnp|12799|2',3'-cyclic nucleotide 3' phosphodiesterase
mm9_v1_chr9_-_103255690_103255706	1.28575	NKX2-1,4.p2	
mm9_v1_chr16_-_87486487_87486518	1.27185	NKX2-1,4.p2	AK207150|Cct8|12469|chaperonin containing Tcp1, subunit 8 (theta)
mm9_v1_chr16_-_88648032_88648040	1.25965	NKX2-1,4.p2	BC128283|Krtap26-1|69533|keratin associated protein 26-1	BC139410|Krtap26-1|69533|keratin associated protein 26-1	BC139411|Krtap26-1|69533|keratin associated protein 26-1	AK009086|Krtap26-1|69533|keratin associated protein 26-1	NM_027105|Krtap26-1|69533|keratin associated protein 26-1
mm9_v1_chr1_-_179178874_179178897	1.25884	NKX2-1,4.p2	AF124142|Akt3|23797|thymoma viral proto-oncogene 3	BC066861|Akt3|23797|thymoma viral proto-oncogene 3	NM_011785|Akt3|23797|thymoma viral proto-oncogene 3
mm9_v1_chr6_-_91757386_91757427	1.25778	NKX2-1,4.p2	NM_001159507|Grip2|243547|glutamate receptor interacting protein 2
mm9_v1_chr9_-_44334460_44334514	1.24288	NKX2-1,4.p2	X71788|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK155954|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK156087|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK157016|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	BC064059|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	NM_007551|Cxcr5|12145|chemokine (C-X-C motif) receptor 5	AK089611|Cxcr5|12145|chemokine (C-X-C motif) receptor 5
mm9_v1_chr11_+_30854457_30854463	1.24194	NKX2-1,4.p2	AK010315|Asb3|65257|ankyrin repeat and SOCS box-containing 3	BC023086|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chr12_-_105938606_105938711	1.23977	NKX2-1,4.p2	AK137929|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)
mm9_v1_chrX_-_151013872_151013872	1.23505	NKX2-1,4.p2	BC100469|Gm5647|434881|predicted gene 5647	NM_001037167|Gm5647|434881|predicted gene 5647
mm9_v1_chr7_-_11751496_11751496	1.23314	NKX2-1,4.p2	EF143406|Zscan4d|545913|zinc finger and SCAN domain containing 4D	NM_001100186|Zscan4d|545913|zinc finger and SCAN domain containing 4D
mm9_v1_chr19_+_21354915_21354945	1.23302	NKX2-1,4.p2	AK185148|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr5_+_147762106_147762155	1.22435	NKX2-1,4.p2	BC032292|Gtf3a|66596|general transcription factor III A
mm9_v1_chr10_+_127669154_127669189	1.21621	NKX2-1,4.p2	BC058641|Timeless|21853|timeless homolog (Drosophila)	BC082770|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr3_+_153507205_153507229	1.19394	NKX2-1,4.p2	BC049572|Asb17|66772|ankyrin repeat and SOCS box-containing 17	AF425641|Asb17|66772|ankyrin repeat and SOCS box-containing 17	AK016273|Asb17|66772|ankyrin repeat and SOCS box-containing 17	NM_025758|Asb17|66772|ankyrin repeat and SOCS box-containing 17	AK017090|Asb17|66772|ankyrin repeat and SOCS box-containing 17
mm9_v1_chr10_-_30375572_30375672	1.17728	NKX2-1,4.p2	BC080742|Ncoa7|211329|nuclear receptor coactivator 7	AK033503|Ncoa7|211329|nuclear receptor coactivator 7	AK171679|Ncoa7|211329|nuclear receptor coactivator 7	BC058572|Ncoa7|211329|nuclear receptor coactivator 7	BC080670|Ncoa7|211329|nuclear receptor coactivator 7	BC049997|Ncoa7|211329|nuclear receptor coactivator 7	AK165098|Ncoa7|211329|nuclear receptor coactivator 7	AK042369|Ncoa7|211329|nuclear receptor coactivator 7	EF602028|Ncoa7|211329|nuclear receptor coactivator 7	NM_001111267|Ncoa7|211329|nuclear receptor coactivator 7
mm9_v1_chr15_+_103129767_103129829	1.1764	NKX2-1,4.p2	
mm9_v1_chr17_-_45796257_45796257	1.17213	NKX2-1,4.p2	AY578330|Capn11|268958|calpain 11	NM_001013767|Capn11|268958|calpain 11
mm9_v1_chr15_-_101723333_101723350	1.17109	NKX2-1,4.p2	AK009075|Krt76|77055|keratin 76	AK036802|Krt76|77055|keratin 76	AK137676|Krt76|77055|keratin 76	NM_001033177|Krt76|77055|keratin 76
mm9_v1_chr1_-_188573165_188573236	1.16613	NKX2-1,4.p2	AK007616|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013217|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	BC006787|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK010658|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK087997|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK013204|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	AK169088|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)	NM_026041|Rrp15|67223|ribosomal RNA processing 15 homolog (S. cerevisiae)
mm9_v1_chr2_+_151736942_151737067	1.15777	NKX2-1,4.p2	AK132988|Angpt4|11602|angiopoietin 4	AK154379|Angpt4|11602|angiopoietin 4	AF113707|Angpt4|11602|angiopoietin 4	BC129965|Angpt4|11602|angiopoietin 4	BC129966|Angpt4|11602|angiopoietin 4	NM_009641|Angpt4|11602|angiopoietin 4
mm9_v1_chr19_+_58586482_58586511	1.14808	NKX2-1,4.p2	AK005864|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene	NM_029372|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene	BC049707|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene
mm9_v1_chr4_-_117438214_117438270	1.14615	NKX2-1,4.p2	BC064748|Klf17|75753|Kruppel-like factor 17	AF508984|Klf17|75753|Kruppel-like factor 17	AK018361|Klf17|75753|Kruppel-like factor 17	AK139827|Klf17|75753|Kruppel-like factor 17	NM_029416|Klf17|75753|Kruppel-like factor 17
mm9_v1_chr9_+_124036265_124036352	1.13453	NKX2-1,4.p2	AK154595|Ccr5|12774|chemokine (C-C motif) receptor 5	NM_009917|Ccr5|12774|chemokine (C-C motif) receptor 5	AK141906|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155632|Ccr5|12774|chemokine (C-C motif) receptor 5	AK170303|Ccr5|12774|chemokine (C-C motif) receptor 5	D83648|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155628|Ccr5|12774|chemokine (C-C motif) receptor 5	AK155867|Ccr5|12774|chemokine (C-C motif) receptor 5	X94151|Ccr5|12774|chemokine (C-C motif) receptor 5	BC105643|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103574|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103586|Ccr5|12774|chemokine (C-C motif) receptor 5	BC103587|Ccr5|12774|chemokine (C-C motif) receptor 5	U47036|Ccr5|12774|chemokine (C-C motif) receptor 5
mm9_v1_chr1_-_38721799_38721808	1.13109	NKX2-1,4.p2	AK046648|Aff3|16764|AF4/FMR2 family, member 3	NM_010678|Aff3|16764|AF4/FMR2 family, member 3
mm9_v1_chr9_-_71743854_71743929	1.13067	NKX2-1,4.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chr2_-_6805937_6806041	1.12925	NKX2-1,4.p2	AK042749|Celf2|14007|CUGBP, Elav-like family member 2	AK164112|Celf2|14007|CUGBP, Elav-like family member 2	AK052102|Celf2|14007|CUGBP, Elav-like family member 2	AK135166|Celf2|14007|CUGBP, Elav-like family member 2	BC026856|Celf2|14007|CUGBP, Elav-like family member 2	AF090697|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110228|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160293|Celf2|14007|CUGBP, Elav-like family member 2	NM_010160|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr6_-_99385338_99385338	1.12797	NKX2-1,4.p2	NM_053202|Foxp1|108655|forkhead box P1
mm9_v1_chr9_+_123429291_123429490	1.12683	NKX2-1,4.p2	AK180316|Limd1|29806|LIM domains containing 1	AK212225|Limd1|29806|LIM domains containing 1	AK215267|Limd1|29806|LIM domains containing 1	AK215631|Limd1|29806|LIM domains containing 1	AK216846|Limd1|29806|LIM domains containing 1	AK220081|Limd1|29806|LIM domains containing 1	AK210611|Limd1|29806|LIM domains containing 1
mm9_v1_chr8_-_44226818_44226839	1.12617	NKX2-1,4.p2	BC141202|Triml1|244448|tripartite motif family-like 1	BC145531|Triml1|244448|tripartite motif family-like 1	AK077092|Triml1|244448|tripartite motif family-like 1	NM_177742|Triml1|244448|tripartite motif family-like 1
mm9_v1_chrX_+_13209894_13209986	1.11475	NKX2-1,4.p2	DQ103766|Gpr34|23890|G protein-coupled receptor 34	DQ103767|Gpr34|23890|G protein-coupled receptor 34	NM_011823|Gpr34|23890|G protein-coupled receptor 34	AK033675|Gpr34|23890|G protein-coupled receptor 34	AK039528|Gpr34|23890|G protein-coupled receptor 34	AK039041|Gpr34|23890|G protein-coupled receptor 34	AK140507|Gpr34|23890|G protein-coupled receptor 34
mm9_v1_chr5_+_44260035_44260114	1.11068	NKX2-1,4.p2	AK150412|Cd38|12494|CD38 antigen	AK153215|Cd38|12494|CD38 antigen	AK151016|Cd38|12494|CD38 antigen	NM_007646|Cd38|12494|CD38 antigen	AK040498|Cd38|12494|CD38 antigen	AK038439|Cd38|12494|CD38 antigen	BC046312|Cd38|12494|CD38 antigen	AK042970|Cd38|12494|CD38 antigen	AK043442|Cd38|12494|CD38 antigen	AK151918|Cd38|12494|CD38 antigen	AK153334|Cd38|12494|CD38 antigen	L11332|Cd38|12494|CD38 antigen	CT010386|Cd38|12494|CD38 antigen
mm9_v1_chr6_+_142723841_142723893	1.10368	NKX2-1,4.p2	AK213220|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase
mm9_v1_chr12_+_106923552_106923650	1.0854	NKX2-1,4.p2	NM_178613|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK171097|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	BC031494|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK168962|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK042664|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK079775|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK020785|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene	AK029484|4933433P14Rik|66787|RIKEN cDNA 4933433P14 gene
mm9_v1_chr8_+_69384110_69384214	1.07469	NKX2-1,4.p2	NM_001163564|Naf1|234344|nuclear assembly factor 1 homolog (S. cerevisiae)
mm9_v1_chr1_+_129702056_129702170	1.06608	NKX2-1,4.p2	AK033697|Ccnt2|72949|cyclin T2
mm9_v1_chr11_-_40562329_40562432	1.06402	NKX2-1,4.p2	
mm9_v1_chr15_+_102839909_102840036	1.05906	NKX2-1,4.p2	X16511|Hoxc6|15425|homeobox C6	BC028482|Hoxc6|15425|homeobox C6	NM_010465|Hoxc6|15425|homeobox C6	BC141061|Hoxc6|15425|homeobox C6	AB221685|Hoxc6|15425|homeobox C6
mm9_v1_chr1_+_182682561_182682684	1.0578	NKX2-1,4.p2	AK018392|Acbd3|170760|acyl-Coenzyme A binding domain containing 3
mm9_v1_chr1_-_180259089_180259120	1.05536	NKX2-1,4.p2	AK049600|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr11_-_83242956_83243022	1.05307	NKX2-1,4.p2	NM_001013759|Gas2l2|237891|growth arrest-specific 2 like 2	BC147480|Gas2l2|237891|growth arrest-specific 2 like 2	BC150847|Gas2l2|237891|growth arrest-specific 2 like 2
mm9_v1_chrX_+_145317118_145317118	1.04773	NKX2-1,4.p2	NM_001114383|Luzp4|434865|leucine zipper protein 4
mm9_v1_chr6_+_30462285_30462303	1.02769	NKX2-1,4.p2	NM_029373|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	AK006332|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene
mm9_v1_chr17_+_18024787_18024817	1.01669	NKX2-1,4.p2	AK054286|Fpr2|14289|formyl peptide receptor 2	NM_008039|Fpr2|14289|formyl peptide receptor 2	U78299|Fpr3|14294|formyl peptide receptor 3
mm9_v1_chr1_+_174886898_174886898	1.00505	NKX2-1,4.p2	BC119298|Olfr16|18313|olfactory receptor 16	BC119300|Olfr16|18313|olfactory receptor 16	NM_008763|Olfr16|18313|olfactory receptor 16
mm9_v1_chr4_-_132848450_132848516	1.00414	NKX2-1,4.p2	
mm9_v1_chr6_+_68375560_68375603	1.00293	NKX2-1,4.p2	M19911|Igkv16-104|381778|immunoglobulin kappa variable 16-104	X14621|Igkv16-104|381778|immunoglobulin kappa variable 16-104
mm9_v1_chr6_-_119367498_119367553	0.994356	NKX2-1,4.p2	BC064109|Adipor2|68465|adiponectin receptor 2	AY424291|Adipor2|68465|adiponectin receptor 2	BC024094|Adipor2|68465|adiponectin receptor 2	NM_197985|Adipor2|68465|adiponectin receptor 2	AK046591|Adipor2|68465|adiponectin receptor 2	AK134787|Adipor2|68465|adiponectin receptor 2	AK160534|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr11_+_101309725_101309821	0.99415	NKX2-1,4.p2	AK131884|Ifi35|70110|interferon-induced protein 35	NM_027320|Ifi35|70110|interferon-induced protein 35	AK008161|Ifi35|70110|interferon-induced protein 35	BC008158|Ifi35|70110|interferon-induced protein 35
mm9_v1_chr5_-_109435454_109435489	0.987232	NKX2-1,4.p2	NM_009491|Vmn2r10|22307|vomeronasal 2, receptor 10	AF011426|Vmn2r10|22307|vomeronasal 2, receptor 10
mm9_v1_chr18_+_24148132_24148185	0.975841	NKX2-1,4.p2	AK132703|Zfp35|22694|zinc finger protein 35	NM_011755|Zfp35|22694|zinc finger protein 35	AK159080|Zfp35|22694|zinc finger protein 35	X17617|Zfp35|22694|zinc finger protein 35
mm9_v1_chr1_+_109407998_109408121	0.974806	NKX2-1,4.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chr19_-_17414057_17414057	0.970753	NKX2-1,4.p2	NM_001136484|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	U19265|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr17_-_34133397_34133417	0.960164	NKX2-1,4.p2	M13197|H2-K1|14972|histocompatibility 2, K1, K region	M23901|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr19_+_44567961_44568029	0.954361	NKX2-1,4.p2	AK050992|Wnt8b|22423|wingless related MMTV integration site 8b	NM_011720|Wnt8b|22423|wingless related MMTV integration site 8b	AF130349|Wnt8b|22423|wingless related MMTV integration site 8b	BC119544|Wnt8b|22423|wingless related MMTV integration site 8b
mm9_v1_chr6_+_57183432_57183432	0.951113	NKX2-1,4.p2	NM_053237|Vmn1r14|113864|vomeronasal 1 receptor 14
mm9_v1_chr4_-_143040204_143040226	0.941443	NKX2-1,4.p2	AY573564|Oog4|242737|oogenesin 4	NM_173773|Oog4|242737|oogenesin 4	BC053722|Oog4|242737|oogenesin 4	BC098485|Oog4|242737|oogenesin 4	AK054346|Oog4|242737|oogenesin 4
mm9_v1_chrX_+_100825924_100825935	0.934455	NKX2-1,4.p2	AK015789|Zcchc13|75064|zinc finger, CCHC domain containing 13	NM_029158|Zcchc13|75064|zinc finger, CCHC domain containing 13	BC145772|Zcchc13|75064|zinc finger, CCHC domain containing 13	BC145774|Zcchc13|75064|zinc finger, CCHC domain containing 13
mm9_v1_chr16_-_89420354_89420355	0.93444	NKX2-1,4.p2	BC116356|Krtap6-2|16701|keratin associated protein 6-2	BC116357|Krtap6-2|16701|keratin associated protein 6-2	D89902|Krtap6-2|16701|keratin associated protein 6-2	NM_010673|Krtap6-2|16701|keratin associated protein 6-2
mm9_v1_chr7_+_54110679_54110700	0.933257	NKX2-1,4.p2	
mm9_v1_chrX_+_103320051_103320105	0.904828	NKX2-1,4.p2	AK030847|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide	AK040753|Atp7a|11977|ATPase, Cu++ transporting, alpha polypeptide
mm9_v1_chr9_-_58050340_58050340	0.90307	NKX2-1,4.p2	NM_001161538|Islr2|320563|immunoglobulin superfamily containing leucine-rich repeat 2
mm9_v1_chr2_+_139996419_139996521	0.902533	NKX2-1,4.p2	BC005630|2310003L22Rik|69487|RIKEN cDNA 2310003L22 gene	AK188392|2310003L22Rik|69487|RIKEN cDNA 2310003L22 gene	AK187586|2310003L22Rik|69487|RIKEN cDNA 2310003L22 gene
mm9_v1_chrX_-_91077290_91077385	0.892395	NKX2-1,4.p2	CT010338|Pdk3|236900|pyruvate dehydrogenase kinase, isoenzyme 3
mm9_v1_chr10_+_110917672_110917672	0.882459	NKX2-1,4.p2	AK050375|Nap1l1|53605|nucleosome assembly protein 1-like 1	NM_001146707|Nap1l1|53605|nucleosome assembly protein 1-like 1
mm9_v1_chr14_+_96280472_96280516	0.877798	NKX2-1,4.p2	BC049573|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK014987|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	NM_025733|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK005846|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene
mm9_v1_chr16_+_33298953_33298979	0.877473	NKX2-1,4.p2	AK198971|Snx4|69150|sorting nexin 4
mm9_v1_chr18_+_35750406_35750586	0.873718	NKX2-1,4.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chrX_+_34805369_34805468	0.860935	NKX2-1,4.p2	AJ972665|Rhox4a|664609|reproductive homeobox 4A	NM_001039688|Rhox4a|664609|reproductive homeobox 4A	DQ058641|Rhox4a|664609|reproductive homeobox 4A	BC116370|Rhox4a|664609|reproductive homeobox 4A	BC116371|Rhox4a|664609|reproductive homeobox 4A	AK017380|Rhox4a|664609|reproductive homeobox 4A	BC057925|Rhox4a|664609|reproductive homeobox 4A	BC145382|Rhox4a|664609|reproductive homeobox 4A	BC171959|Rhox4a|664609|reproductive homeobox 4A
mm9_v1_chr13_+_89680393_89680435	0.851598	NKX2-1,4.p2	BC066853|Hapln1|12950|hyaluronan and proteoglycan link protein 1
mm9_v1_chr4_-_144681825_144681852	0.847253	NKX2-1,4.p2	BC037490|Vps13d|230895|vacuolar protein sorting 13 D (yeast)
mm9_v1_chr17_-_18414529_18414529	0.82896	NKX2-1,4.p2	NM_001104543|Vmn2r94|665227|vomeronasal 2, receptor 94
mm9_v1_chr4_+_88481428_88481428	0.823531	NKX2-1,4.p2	BC120910|Ifna5|15968|interferon alpha 5	BC120911|Ifna5|15968|interferon alpha 5	NM_010505|Ifna5|15968|interferon alpha 5
mm9_v1_chr13_-_27734332_27734361	0.813141	NKX2-1,4.p2	AF020525|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AF011381|Prl7a1|19113|prolactin family 7, subfamily a, member 1	BC051671|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AK028371|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AK141309|Prl7a1|19113|prolactin family 7, subfamily a, member 1	AK146050|Prl7a1|19113|prolactin family 7, subfamily a, member 1	NM_001164058|Prl7a1|19113|prolactin family 7, subfamily a, member 1	NM_008930|Prl7a1|19113|prolactin family 7, subfamily a, member 1
mm9_v1_chr2_-_60589953_60589966	0.812712	NKX2-1,4.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr2_-_160773804_160773823	0.79634	NKX2-1,4.p2	AK017414|Chd6|71389|chromodomain helicase DNA binding protein 6
mm9_v1_chr7_+_54116624_54116645	0.775933	NKX2-1,4.p2	X04752|Ldhc|16833|lactate dehydrogenase C	BC049602|Ldhc|16833|lactate dehydrogenase C	AK007058|Ldhc|16833|lactate dehydrogenase C	NM_013580|Ldhc|16833|lactate dehydrogenase C	AK161399|Ldhc|16833|lactate dehydrogenase C
mm9_v1_chr17_+_29839370_29839515	0.774953	NKX2-1,4.p2	
mm9_v1_chr6_-_87793898_87794088	0.763942	NKX2-1,4.p2	AK207643|Cnbp|12785|cellular nucleic acid binding protein	AK188144|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr2_-_163450863_163450871	0.758383	NKX2-1,4.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr8_-_3748926_3748983	0.75562	NKX2-1,4.p2	AK171639|Cd209a|170786|CD209a antigen	AF373408|Cd209a|170786|CD209a antigen	AF374470|Cd209a|170786|CD209a antigen	BC111095|Cd209a|170786|CD209a antigen	AK054139|Cd209a|170786|CD209a antigen	AY049062|Cd209a|170786|CD209a antigen	NM_133238|Cd209a|170786|CD209a antigen
mm9_v1_chr2_+_162760505_162760606	0.755486	NKX2-1,4.p2	
mm9_v1_chr17_+_71596413_71596481	0.755072	NKX2-1,4.p2	AK021389|Lpin2|64898|lipin 2
mm9_v1_chrX_-_153853209_153853243	0.749461	NKX2-1,4.p2	U49908|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	NM_011077|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	U73910|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)	AK158481|Phex|18675|phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)
mm9_v1_chrX_-_151384047_151384111	0.746835	NKX2-1,4.p2	AY438669|Magea3|17139|melanoma antigen, family A, 3	BC119064|Magea3|17139|melanoma antigen, family A, 3	BC119066|Magea3|17139|melanoma antigen, family A, 3	NM_020017|Magea3|17139|melanoma antigen, family A, 3
mm9_v1_chr8_+_119983664_119983684	0.741387	NKX2-1,4.p2	
mm9_v1_chr11_+_58777282_58777303	0.740617	NKX2-1,4.p2	BC055112|Trim17|56631|tripartite motif-containing 17	NM_031172|Trim17|56631|tripartite motif-containing 17	AK077212|Trim17|56631|tripartite motif-containing 17
mm9_v1_chr3_+_109376824_109376976	0.740089	NKX2-1,4.p2	AF140280|Vav3|57257|vav 3 oncogene	NM_146139|Vav3|57257|vav 3 oncogene	AK147053|Vav3|57257|vav 3 oncogene	BC027242|Vav3|57257|vav 3 oncogene
mm9_v1_chr5_+_138575144_138575283	0.740044	NKX2-1,4.p2	
mm9_v1_chr7_-_29551532_29551548	0.740017	NKX2-1,4.p2	AY176059|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	AK038631|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	NM_010908|Nfkbib|18036|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
mm9_v1_chr1_+_179374783_179374796	0.733995	NKX2-1,4.p2	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr2_-_148269170_148269322	0.717954	NKX2-1,4.p2	AK155060|Cd93|17064|CD93 antigen	AK079060|Cd93|17064|CD93 antigen	NM_010740|Cd93|17064|CD93 antigen	AF081789|Cd93|17064|CD93 antigen	AK028485|Cd93|17064|CD93 antigen
mm9_v1_chr7_-_148040227_148040484	0.711936	NKX2-1,4.p2	BC052402|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like	AK003184|Bet1l|54399|blocked early in transport 1 homolog (S. cerevisiae)-like
mm9_v1_chr6_+_135313056_135313087	0.711013	NKX2-1,4.p2	AK168806|Emp1|13730|epithelial membrane protein 1	U25633|Emp1|13730|epithelial membrane protein 1	BC138491|Emp1|13730|epithelial membrane protein 1
mm9_v1_chr3_-_91946657_91946675	0.706213	NKX2-1,4.p2	AK015762|4930511M18Rik|75063|RIKEN cDNA 4930511M18 gene	AK005903|Lelp1|69332|late cornified envelope-like proline-rich 1	NM_027042|Lelp1|69332|late cornified envelope-like proline-rich 1
mm9_v1_chr2_-_147011990_147012137	0.705747	NKX2-1,4.p2	AK043561|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138159|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	BC138160|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	U31566|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	AK141002|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_001077632|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)	NM_010919|Nkx2-2|18088|NK2 transcription factor related, locus 2 (Drosophila)
mm9_v1_chr2_+_151822240_151822265	0.696575	NKX2-1,4.p2	NM_027172|2310046K01Rik|69698|RIKEN cDNA 2310046K01 gene	AK154970|2310046K01Rik|69698|RIKEN cDNA 2310046K01 gene
mm9_v1_chrX_-_137491205_137491263	0.691686	NKX2-1,4.p2	AB022022|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	BC026931|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	BC056196|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	AK009068|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	AK018233|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	AK136400|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	NM_001164177|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	NM_016883|Psmd10|53380|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
mm9_v1_chr1_-_175696989_175697156	0.68807	NKX2-1,4.p2	AK150522|Ifi204|15951|interferon activated gene 204	NM_008329|Ifi204|15951|interferon activated gene 204	AK138785|Ifi204|15951|interferon activated gene 204
mm9_v1_chr19_-_39961258_39961288	0.684748	NKX2-1,4.p2	NM_001104525|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69	BC145630|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69
mm9_v1_chr8_-_131589372_131589416	0.677971	NKX2-1,4.p2	AK015811|Ccdc7|74703|coiled-coil domain containing 7	AK016006|Ccdc7|74703|coiled-coil domain containing 7	EF100607|Ccdc7|74703|coiled-coil domain containing 7	NM_001197041|Ccdc7|74703|coiled-coil domain containing 7	NM_029061|Ccdc7|74703|coiled-coil domain containing 7	AY854152|Ccdc7|74703|coiled-coil domain containing 7
mm9_v1_chr6_-_97010364_97010406	0.676438	NKX2-1,4.p2	BC089490|Fam19a4|320701|family with sequence similarity 19, member A4	AK081531|Fam19a4|320701|family with sequence similarity 19, member A4	AK084114|Fam19a4|320701|family with sequence similarity 19, member A4	NM_177233|Fam19a4|320701|family with sequence similarity 19, member A4	AK149355|Fam19a4|320701|family with sequence similarity 19, member A4
mm9_v1_chr13_+_8952108_8952122	0.675955	NKX2-1,4.p2	AK029364|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	AK081319|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	AY263178|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	NM_177197|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	BC099586|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	BC125310|Idi2|320581|isopentenyl-diphosphate delta isomerase 2	BC138100|Idi2|320581|isopentenyl-diphosphate delta isomerase 2
mm9_v1_chr1_+_177628723_177628723	0.671357	NKX2-1,4.p2	AK133092|Wdr64|75820|WD repeat domain 64	NM_029453|Wdr64|75820|WD repeat domain 64
mm9_v1_chr7_-_52870858_52870859	0.6665	NKX2-1,4.p2	BC049592|Fgf21|56636|fibroblast growth factor 21	AK007574|Fgf21|56636|fibroblast growth factor 21	NM_020013|Fgf21|56636|fibroblast growth factor 21
mm9_v1_chr17_-_44951745_44951745	0.658469	NKX2-1,4.p2	DQ458792|Runx2|12393|runt related transcription factor 2	NM_001146038|Runx2|12393|runt related transcription factor 2	NM_009820|Runx2|12393|runt related transcription factor 2
mm9_v1_chr17_+_49754460_49754540	0.653935	NKX2-1,4.p2	AK083760|Kif6|319991|kinesin family member 6	NM_177052|Kif6|319991|kinesin family member 6	AK043404|Kif6|319991|kinesin family member 6
mm9_v1_chr11_+_11389268_11389268	0.644949	NKX2-1,4.p2	AK015144|4930415F15Rik|73862|RIKEN cDNA 4930415F15 gene	NM_028669|4930415F15Rik|73862|RIKEN cDNA 4930415F15 gene
mm9_v1_chr7_+_52877180_52877296	0.64293	NKX2-1,4.p2	AB195681|Izumo1|73456|izumo sperm-egg fusion 1	AK006830|Izumo1|73456|izumo sperm-egg fusion 1	NM_001018013|Izumo1|73456|izumo sperm-egg fusion 1	BC139270|Izumo1|73456|izumo sperm-egg fusion 1
mm9_v1_chrX_+_34971918_34972062	0.635133	NKX2-1,4.p2	AJ972669|Rhox4e|194856|reproductive homeobox 4E	NM_201236|Rhox4e|194856|reproductive homeobox 4E	BC094891|Rhox4e|194856|reproductive homeobox 4E	BC172128|Rhox4e|194856|reproductive homeobox 4E
mm9_v1_chr19_-_12840121_12840121	0.634086	NKX2-1,4.p2	BC027539|Cntf|12803|ciliary neurotrophic factor	NM_170786|Cntf|12803|ciliary neurotrophic factor
mm9_v1_chrX_-_76880891_76880920	0.633497	NKX2-1,4.p2	AK167347|Mageb16|71967|melanoma antigen family B, 16	BC050207|Mageb16|71967|melanoma antigen family B, 16	NM_001113734|Mageb16|71967|melanoma antigen family B, 16
mm9_v1_chr9_+_44448105_44448130	0.629901	NKX2-1,4.p2	AK003265|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr13_-_60904143_60904204	0.625441	NKX2-1,4.p2	BC147423|Ctsll3|70202|cathepsin L-like 3	BC147424|Ctsll3|70202|cathepsin L-like 3	AK145382|Ctsll3|70202|cathepsin L-like 3	NM_027344|Ctsll3|70202|cathepsin L-like 3
mm9_v1_chr3_-_14808320_14808364	0.622719	NKX2-1,4.p2	BC132432|Car1|12346|carbonic anhydrase 1	BC132434|Car1|12346|carbonic anhydrase 1	M32452|Car1|12346|carbonic anhydrase 1	AK172076|Car1|12346|carbonic anhydrase 1	AK003066|Car1|12346|carbonic anhydrase 1	AK146372|Car1|12346|carbonic anhydrase 1	AK167969|Car1|12346|carbonic anhydrase 1	NM_009799|Car1|12346|carbonic anhydrase 1
mm9_v1_chr18_+_78021267_78021344	0.620102	NKX2-1,4.p2	
mm9_v1_chr11_+_30854418_30854447	0.615973	NKX2-1,4.p2	AK038086|Asb3|65257|ankyrin repeat and SOCS box-containing 3	AK038897|Asb3|65257|ankyrin repeat and SOCS box-containing 3
mm9_v1_chr10_-_33344405_33344571	0.615297	NKX2-1,4.p2	AK039308|Clvs2|215890|clavesin 2	NM_175448|Clvs2|215890|clavesin 2	BC058539|Clvs2|215890|clavesin 2	AK163214|Clvs2|215890|clavesin 2	AK053797|Clvs2|215890|clavesin 2	AK139868|Clvs2|215890|clavesin 2	AK139409|Clvs2|215890|clavesin 2	AK169009|Clvs2|215890|clavesin 2
mm9_v1_chr8_+_74676812_74676920	0.608583	NKX2-1,4.p2	
mm9_v1_chr1_-_65097587_65097736	0.597501	NKX2-1,4.p2	K02584|Cryge|12968|crystallin, gamma E	BC057012|Cryge|12968|crystallin, gamma E	BC078417|Cryge|12968|crystallin, gamma E	AK014301|Cryge|12968|crystallin, gamma E	BC132506|Cryge|12968|crystallin, gamma E	BC132508|Cryge|12968|crystallin, gamma E	NM_007777|Cryge|12968|crystallin, gamma E
mm9_v1_chr17_+_37138107_37138107	0.580193	NKX2-1,4.p2	AK139625|Zfp57|22715|zinc finger protein 57	NM_001168502|Zfp57|22715|zinc finger protein 57
mm9_v1_chr11_-_99418138_99418166	0.569387	NKX2-1,4.p2	BC117058|Krtap3-2|66708|keratin associated protein 3-2	BC117092|Krtap3-2|66708|keratin associated protein 3-2	AK003615|Krtap3-2|66708|keratin associated protein 3-2	AK014641|Krtap3-2|66708|keratin associated protein 3-2	NM_025720|Krtap3-2|66708|keratin associated protein 3-2
mm9_v1_chr3_-_116317504_116317504	0.564368	NKX2-1,4.p2	AK039588|Ccdc76|229780|coiled-coil domain containing 76	NM_030016|Ccdc76|229780|coiled-coil domain containing 76
mm9_v1_chrX_-_151582391_151582391	0.562205	NKX2-1,4.p2	BC100353|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene	NM_001081671|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene
mm9_v1_chr9_+_36500804_36500844	0.555614	NKX2-1,4.p2	AK005705|Acrv1|11451|acrosomal vesicle protein 1	BC100459|Acrv1|11451|acrosomal vesicle protein 1	NM_007391|Acrv1|11451|acrosomal vesicle protein 1	U31992|Acrv1|11451|acrosomal vesicle protein 1	AK030129|Acrv1|11451|acrosomal vesicle protein 1	BC139101|Acrv1|11451|acrosomal vesicle protein 1	BC139103|Acrv1|11451|acrosomal vesicle protein 1
mm9_v1_chr3_-_88636394_88636410	0.551724	NKX2-1,4.p2	BC094555|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK036207|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK038592|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK040690|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK075724|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK083200|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK084105|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene
mm9_v1_chr2_-_112099427_112099447	0.547671	NKX2-1,4.p2	BC125332|BC125332|213765|cDNA sequence BC125332	BC125334|BC125332|213765|cDNA sequence BC125332	AK077049|BC125332|213765|cDNA sequence BC125332	NM_172521|BC125332|213765|cDNA sequence BC125332
mm9_v1_chr5_+_104494153_104494232	0.544783	NKX2-1,4.p2	
mm9_v1_chr9_+_96159123_96159160	0.537912	NKX2-1,4.p2	NM_001184709|Tfdp2|211586|transcription factor Dp 2	AK033356|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr6_-_102414660_102414660	0.532337	NKX2-1,4.p2	NM_008779|Cntn3|18488|contactin 3
mm9_v1_chr3_-_30546739_30546790	0.525764	NKX2-1,4.p2	BC100519|Lrrc34|71827|leucine rich repeat containing 34	NM_027941|Lrrc34|71827|leucine rich repeat containing 34	AK005720|Lrrc34|71827|leucine rich repeat containing 34
mm9_v1_chrX_+_17722982_17722995	0.52399	NKX2-1,4.p2	AK007061|Dusp21|73547|dual specificity phosphatase 21	BC048605|Dusp21|73547|dual specificity phosphatase 21	NM_028568|Dusp21|73547|dual specificity phosphatase 21
mm9_v1_chr11_+_49060978_49060984	0.517564	NKX2-1,4.p2	AK040121|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	NM_001110149|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr1_-_129998984_129999039	0.516071	NKX2-1,4.p2	BC066035|Zranb3|226409|zinc finger, RAN-binding domain containing 3	NM_027678|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK042139|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK083641|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK084943|Zranb3|226409|zinc finger, RAN-binding domain containing 3	AK085488|Zranb3|226409|zinc finger, RAN-binding domain containing 3
mm9_v1_chr7_+_52897090_52897145	0.514739	NKX2-1,4.p2	AK052976|Mamstr|74490|MEF2 activating motif and SAP domain containing transcriptional regulator	AK036109|Mamstr|74490|MEF2 activating motif and SAP domain containing transcriptional regulator
mm9_v1_chr8_+_131591033_131591104	0.510318	NKX2-1,4.p2	AK005764|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_001168369|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_029292|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	AK076548|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	BC147560|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene
mm9_v1_chr16_+_94914273_94914275	0.508984	NKX2-1,4.p2	AK165966|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a	AK163136|Dyrk1a|13548|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm9_v1_chr1_-_180259336_180259529	0.499487	NKX2-1,4.p2	AK049375|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK080656|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr2_-_84875990_84875990	0.497534	NKX2-1,4.p2	NM_145526|P2rx3|228139|purinergic receptor P2X, ligand-gated ion channel, 3
mm9_v1_chr3_-_58984006_58984035	0.493085	NKX2-1,4.p2	AF295366|Gpr87|84111|G protein-coupled receptor 87	NM_032399|Gpr87|84111|G protein-coupled receptor 87	BC125653|Gpr87|84111|G protein-coupled receptor 87	BC125655|Gpr87|84111|G protein-coupled receptor 87
mm9_v1_chr1_+_75165201_75165358	0.479749	NKX2-1,4.p2	NM_001159905|Zfand2b|68818|zinc finger, AN1 type domain 2B	NM_001159906|Zfand2b|68818|zinc finger, AN1 type domain 2B	BC011495|Zfand2b|68818|zinc finger, AN1 type domain 2B	AK151430|Zfand2b|68818|zinc finger, AN1 type domain 2B	NM_026846|Zfand2b|68818|zinc finger, AN1 type domain 2B	AK004332|Zfand2b|68818|zinc finger, AN1 type domain 2B
mm9_v1_chr6_-_38074549_38074585	0.475773	NKX2-1,4.p2	AK165464|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AF435090|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK128892|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	AK143790|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4	NM_080467|Atp6v0a4|140494|ATPase, H+ transporting, lysosomal V0 subunit A4
mm9_v1_chr2_+_164142482_164142497	0.47302	NKX2-1,4.p2	BC119247|Svs6|20945|seminal vesicle secretory protein 6	BC119249|Svs6|20945|seminal vesicle secretory protein 6	AK020303|Svs6|20945|seminal vesicle secretory protein 6	NM_013679|Svs6|20945|seminal vesicle secretory protein 6	L11393|Svs6|20945|seminal vesicle secretory protein 6	S65753|Svs6|20945|seminal vesicle secretory protein 6
mm9_v1_chr4_+_13678443_13678575	0.463191	NKX2-1,4.p2	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr1_-_14908915_14908942	0.460565	NKX2-1,4.p2	AY231177|Trpa1|277328|transient receptor potential cation channel, subfamily A, member 1	BC120563|Trpa1|277328|transient receptor potential cation channel, subfamily A, member 1	BC131963|Trpa1|277328|transient receptor potential cation channel, subfamily A, member 1	AK045771|Trpa1|277328|transient receptor potential cation channel, subfamily A, member 1	NM_177781|Trpa1|277328|transient receptor potential cation channel, subfamily A, member 1
mm9_v1_chr9_-_70782614_70782614	0.459676	NKX2-1,4.p2	BC021841|Lipc|15450|lipase, hepatic	NM_008280|Lipc|15450|lipase, hepatic
mm9_v1_chr4_+_104438905_104438999	0.455276	NKX2-1,4.p2	AK050313|C8b|110382|complement component 8, beta polypeptide	NM_133882|C8b|110382|complement component 8, beta polypeptide	BC096382|C8b|110382|complement component 8, beta polypeptide	AB077304|C8b|110382|complement component 8, beta polypeptide	AB077305|C8b|110382|complement component 8, beta polypeptide	AB077306|C8b|110382|complement component 8, beta polypeptide
mm9_v1_chr16_+_48816968_48817099	0.451492	NKX2-1,4.p2	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr4_+_126800830_126800906	0.451275	NKX2-1,4.p2	BC060297|Zmym6|100177|zinc finger, MYM-type 6
mm9_v1_chr19_-_8293322_8293389	0.438476	NKX2-1,4.p2	AF536196|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AK052597|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	BC126952|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	NM_172776|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene	AF536195|D630002G06Rik|236293|RIKEN cDNA D630002G06 gene
mm9_v1_chr7_-_107475377_107475426	0.420503	NKX2-1,4.p2	
mm9_v1_chr11_-_94622495_94622495	0.419916	NKX2-1,4.p2	AK139527|Gm11545|217122|predicted gene 11545	NM_001105561|Gm11545|217122|predicted gene 11545
mm9_v1_chr5_-_116099042_116099073	0.411186	NKX2-1,4.p2	AK008818|Ccdc64|75665|coiled-coil domain containing 64
mm9_v1_chr2_+_121976718_121976869	0.409743	NKX2-1,4.p2	M10416|B2m|12010|beta-2 microglobulin
mm9_v1_chrX_-_54646073_54646213	0.404369	NKX2-1,4.p2	AK207357|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237846|Rbmx|19655|RNA binding motif protein, X chromosome	AJ237847|Rbmx|19655|RNA binding motif protein, X chromosome	AK165006|Rbmx|19655|RNA binding motif protein, X chromosome	BC003710|Rbmx|19655|RNA binding motif protein, X chromosome	AK083899|Rbmx|19655|RNA binding motif protein, X chromosome	AK135164|Rbmx|19655|RNA binding motif protein, X chromosome	NM_001166623|Rbmx|19655|RNA binding motif protein, X chromosome	NM_011252|Rbmx|19655|RNA binding motif protein, X chromosome
mm9_v1_chr11_+_95343299_95343327	0.398709	NKX2-1,4.p2	
mm9_v1_chr4_+_154927385_154927543	0.394507	NKX2-1,4.p2	BC003294|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr2_+_4897196_4897196	0.394187	NKX2-1,4.p2	EF529510|Ucma|68527|upper zone of growth plate and cartilage matrix associated
mm9_v1_chr1_-_174825160_174825190	0.393245	NKX2-1,4.p2	M23552|Apcs|20219|serum amyloid P-component	X14079|Apcs|20219|serum amyloid P-component	Y00426|Apcs|20219|serum amyloid P-component	NM_011318|Apcs|20219|serum amyloid P-component
mm9_v1_chr3_-_103546233_103546253	0.388741	NKX2-1,4.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr7_-_125263314_125263384	0.362854	NKX2-1,4.p2	AK004228|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK012904|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK005514|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr19_-_39815590_39815597	0.357102	NKX2-1,4.p2	NM_001039555|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr2_+_153700780_153700825	0.354218	NKX2-1,4.p2	AK010157|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	NM_025631|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009504|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK028158|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009346|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009619|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009871|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009794|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010120|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010154|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010215|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK028156|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK075874|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK160516|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK009776|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	AK010130|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	BC116681|Bpil1|66557|bactericidal/permeability-increasing protein-like 1	BC116727|Bpil1|66557|bactericidal/permeability-increasing protein-like 1
mm9_v1_chr4_-_91813911_91813924	0.349716	NKX2-1,4.p2	BC099579|Izumo3|69314|IZUMO family member 3	NM_027034|Izumo3|69314|IZUMO family member 3	AK005867|Izumo3|69314|IZUMO family member 3
mm9_v1_chr10_-_75227029_75227101	0.346382	NKX2-1,4.p2	BC057551|Cabin1|104248|calcineurin binding protein 1	AK168811|Cabin1|104248|calcineurin binding protein 1	AK162479|Cabin1|104248|calcineurin binding protein 1	AK078480|Cabin1|104248|calcineurin binding protein 1	NM_172549|Cabin1|104248|calcineurin binding protein 1
mm9_v1_chr12_-_29382024_29382106	0.343627	NKX2-1,4.p2	BC002235|Ttc15|217449|tetratricopeptide repeat domain 15
mm9_v1_chr9_-_119603442_119603477	0.343418	NKX2-1,4.p2	AY538273|Scn10a|20264|sodium channel, voltage-gated, type X, alpha	NM_009134|Scn10a|20264|sodium channel, voltage-gated, type X, alpha	Y09108|Scn10a|20264|sodium channel, voltage-gated, type X, alpha
mm9_v1_chr16_+_20517042_20517258	0.329771	NKX2-1,4.p2	U41285|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	AK052151|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	NM_007889|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)	BC033414|Dvl3|13544|dishevelled 3, dsh homolog (Drosophila)
mm9_v1_chr17_+_3482314_3482460	0.328243	NKX2-1,4.p2	AK158489|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr1_-_174825067_174825072	0.327403	NKX2-1,4.p2	AK144248|Apcs|20219|serum amyloid P-component	AK165699|Apcs|20219|serum amyloid P-component
mm9_v1_chr6_-_34927998_34927998	0.326795	NKX2-1,4.p2	BC075651|2010107G12Rik|243753|RIKEN cDNA 2010107G12 gene	NM_001025573|2010107G12Rik|243753|RIKEN cDNA 2010107G12 gene
mm9_v1_chr13_+_100897826_100897856	0.326646	NKX2-1,4.p2	AK208849|Smn1|20595|survival motor neuron 1	AK214738|Smn1|20595|survival motor neuron 1
mm9_v1_chr17_-_23981121_23981138	0.317888	NKX2-1,4.p2	AK016509|Prss41|71003|protease, serine, 41	AB049453|Prss41|71003|protease, serine, 41	NM_027644|Prss41|71003|protease, serine, 41	AK049297|Prss41|71003|protease, serine, 41	BC145586|Prss41|71003|protease, serine, 41	BC150797|Prss41|71003|protease, serine, 41
mm9_v1_chr15_+_25870456_25870763	0.316853	NKX2-1,4.p2	AK167327|Fam134b|66270|family with sequence similarity 134, member B	AK146972|Fam134b|66270|family with sequence similarity 134, member B	BC019494|Fam134b|66270|family with sequence similarity 134, member B	NM_025459|Fam134b|66270|family with sequence similarity 134, member B	BC054415|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr2_+_92218979_92219090	0.31657	NKX2-1,4.p2	
mm9_v1_chr8_+_131256428_131256477	0.315063	NKX2-1,4.p2	AK008343|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr11_+_67090625_67090855	0.311345	NKX2-1,4.p2	NM_177369|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021877|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021876|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	BC150737|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK029328|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK081482|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AK087387|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	AY963802|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal	DQ021878|Myh8|17885|myosin, heavy polypeptide 8, skeletal muscle, perinatal
mm9_v1_chr3_+_95091630_95092080	0.311335	NKX2-1,4.p2	BC132301|Fam63a|75007|family with sequence similarity 63, member A	BC144749|Fam63a|75007|family with sequence similarity 63, member A	AK191590|Fam63a|75007|family with sequence similarity 63, member A	AK211364|Fam63a|75007|family with sequence similarity 63, member A	AB075603|Fam63a|75007|family with sequence similarity 63, member A	BC051048|Fam63a|75007|family with sequence similarity 63, member A	BC039762|Fam63a|75007|family with sequence similarity 63, member A
mm9_v1_chr9_-_44611055_44611072	0.307143	NKX2-1,4.p2	AK149384|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr11_-_97372344_97372370	0.301475	NKX2-1,4.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr13_-_98669545_98669547	0.298755	NKX2-1,4.p2	AK020332|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr19_-_39815529_39815559	0.272485	NKX2-1,4.p2	BC019468|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr7_+_52769075_52769124	0.267524	NKX2-1,4.p2	NM_001045555|Tulp2|56734|tubby-like protein 2	NM_008807|Tulp2|56734|tubby-like protein 2	AK077200|Tulp2|56734|tubby-like protein 2	AF105712|Tulp2|56734|tubby-like protein 2
mm9_v1_chr3_-_20022409_20022533	0.254129	NKX2-1,4.p2	AK207016|Gyg|27357|glycogenin	AK206608|Gyg|27357|glycogenin	AK190314|Gyg|27357|glycogenin	AK210267|Gyg|27357|glycogenin
mm9_v1_chr19_+_53214934_53215104	0.245292	NKX2-1,4.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr19_-_39723518_39723548	0.243387	NKX2-1,4.p2	BC092260|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	BC106142|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	NM_001024719|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67	AK149389|Cyp2c67|545288|cytochrome P450, family 2, subfamily c, polypeptide 67
mm9_v1_chr7_-_112478791_112478791	0.240952	NKX2-1,4.p2	BC137757|Olfr690|56860|olfactory receptor 690	NM_020290|Olfr690|56860|olfactory receptor 690
mm9_v1_chr8_+_38056628_38056675	0.239841	NKX2-1,4.p2	NM_001039220|AI429214|621080|expressed sequence AI429214	AK161334|AI429214|621080|expressed sequence AI429214	AK132736|AI429214|621080|expressed sequence AI429214	BC150875|AI429214|621080|expressed sequence AI429214
mm9_v1_chr2_-_120365581_120365597	0.217083	NKX2-1,4.p2	U59739|Zfp106|20402|zinc finger protein 106
mm9_v1_chr3_-_10301182_10301182	0.208817	NKX2-1,4.p2	BC030910|Fabp12|75497|fatty acid binding protein 12	NM_029310|Fabp12|75497|fatty acid binding protein 12
mm9_v1_chr7_+_51031646_51031698	0.207745	NKX2-1,4.p2	AB016226|Klk11|56538|kallikrein related-peptidase 11	BC115518|Klk11|56538|kallikrein related-peptidase 11	BC148310|Klk11|56538|kallikrein related-peptidase 11	NM_019974|Klk11|56538|kallikrein related-peptidase 11
mm9_v1_chr18_-_39646734_39646900	0.175209	NKX2-1,4.p2	AK037733|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	DQ504162|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	HM236293|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13358|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X13359|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	NM_008173|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129912|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	BC129913|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	X04435|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr10_-_62666659_62666699	0.171534	NKX2-1,4.p2	AK036458|Mypn|68802|myopalladin	AK220521|Mypn|68802|myopalladin	NM_182992|Mypn|68802|myopalladin
mm9_v1_chr2_-_27940370_27940408	0.168544	NKX2-1,4.p2	AF063217|Fcnb|14134|ficolin B	BC107220|Fcnb|14134|ficolin B	BC107221|Fcnb|14134|ficolin B	NM_010190|Fcnb|14134|ficolin B	AK151676|Fcnb|14134|ficolin B
mm9_v1_chr6_+_96063137_96063148	0.150481	NKX2-1,4.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr14_+_28051224_28051247	0.148622	NKX2-1,4.p2	AK004600|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	NM_027871|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036737|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036749|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr9_+_57369044_57369118	0.139081	NKX2-1,4.p2	BC003831|Cox5a|12858|cytochrome c oxidase, subunit Va	BC034302|Cox5a|12858|cytochrome c oxidase, subunit Va	AK018723|Cox5a|12858|cytochrome c oxidase, subunit Va	X15963|Cox5a|12858|cytochrome c oxidase, subunit Va
mm9_v1_chr1_+_17591981_17592085	0.128566	NKX2-1,4.p2	AK030960|Pi15|94227|peptidase inhibitor 15	NM_053191|Pi15|94227|peptidase inhibitor 15	AK040961|Pi15|94227|peptidase inhibitor 15	AF329196|Pi15|94227|peptidase inhibitor 15	BC116705|Pi15|94227|peptidase inhibitor 15
mm9_v1_chr9_-_110018085_110018088	0.126742	NKX2-1,4.p2	AB047557|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_133347|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC058331|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr1_-_73062445_73062472	0.125294	NKX2-1,4.p2	X12521|Tnp1|21958|transition protein 1	AK006495|Tnp1|21958|transition protein 1	BC061170|Tnp1|21958|transition protein 1	BC048494|Tnp1|21958|transition protein 1	NM_009407|Tnp1|21958|transition protein 1
mm9_v1_chr6_+_115528094_115528179	0.123152	NKX2-1,4.p2	
mm9_v1_chr10_-_80260534_80260707	0.122481	NKX2-1,4.p2	AK219000|Plekhj1|78670|pleckstrin homology domain containing, family J member 1	AK178993|Plekhj1|78670|pleckstrin homology domain containing, family J member 1
mm9_v1_chr10_-_116782524_116782604	0.121742	NKX2-1,4.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr8_+_22341282_22341282	0.112177	NKX2-1,4.p2	NM_001177486|Gm15293|100041759|predicted gene 15293
mm9_v1_chr2_-_91516101_91516113	0.110129	NKX2-1,4.p2	BC024457|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr7_-_16531363_16531456	0.0931004	NKX2-1,4.p2	BC025810|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AY535001|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK077341|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK160070|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK088461|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK151836|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK169290|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	AK146916|Gltscr2|68077|glioma tumor suppressor candidate region gene 2	NM_133831|Gltscr2|68077|glioma tumor suppressor candidate region gene 2
mm9_v1_chr2_-_120346171_120346284	0.0856849	NKX2-1,4.p2	AF060245|Zfp106|20402|zinc finger protein 106	AK029313|Zfp106|20402|zinc finger protein 106
mm9_v1_chr7_-_150734696_150734742	0.0851542	NKX2-1,4.p2	AK090112|Nap1l4|17955|nucleosome assembly protein 1-like 4
mm9_v1_chr9_+_44446796_44446798	0.0824672	NKX2-1,4.p2	AK156303|Ddx6|13209|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm9_v1_chr2_-_110790259_110790446	0.0799075	NKX2-1,4.p2	NM_001128103|Ano3|228432|anoctamin 3	AK045930|Ano3|228432|anoctamin 3	NM_001081556|Ano3|228432|anoctamin 3
mm9_v1_chr5_+_22988226_22988243	0.0631292	NKX2-1,4.p2	
mm9_v1_chr10_+_80644982_80645055	0.0620552	NKX2-1,4.p2	
mm9_v1_chr6_-_130256444_130256498	0.0601482	NKX2-1,4.p2	AF204265|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204266|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204267|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF204268|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	BC099861|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF074460|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF283250|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283251|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF283252|Klra13-ps|16631|killer cell lectin-like receptor subfamily A, member 13, pseudogene	AF307947|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	AF307948|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12	NM_010646|Klra12|16630|killer cell lectin-like receptor subfamily A, member 12
mm9_v1_chr2_-_148676641_148676677	0.0419588	NKX2-1,4.p2	BC104302|9230104L09Rik|77705|RIKEN cDNA 9230104L09 gene	BC104303|9230104L09Rik|77705|RIKEN cDNA 9230104L09 gene	AK020314|9230104L09Rik|77705|RIKEN cDNA 9230104L09 gene	NM_029960|9230104L09Rik|77705|RIKEN cDNA 9230104L09 gene
mm9_v1_chr8_-_88063071_88063191	0.0181326	NKX2-1,4.p2	
mm9_v1_chrX_+_159216296_159216363	0.0107424	NKX2-1,4.p2	AK181761|Rbbp7|245688|retinoblastoma binding protein 7	AK206140|Rbbp7|245688|retinoblastoma binding protein 7	AK213569|Rbbp7|245688|retinoblastoma binding protein 7	AK207469|Rbbp7|245688|retinoblastoma binding protein 7	AK208251|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr8_+_22437072_22437123	0.00730169	NKX2-1,4.p2	NM_007851|Defa5|13239|defensin, alpha, 5	BC119610|Defa5|13239|defensin, alpha, 5
mm9_v1_chr9_+_96159666_96159703	0.00356338	NKX2-1,4.p2	NM_001184710|Tfdp2|211586|transcription factor Dp 2	NM_001184711|Tfdp2|211586|transcription factor Dp 2	AK158829|Tfdp2|211586|transcription factor Dp 2	BC092230|Tfdp2|211586|transcription factor Dp 2
mm9_v1_chr5_+_95885824_95885878	0.00206799	NKX2-1,4.p2	AK054417|D5Ertd577e|320549|DNA segment, Chr 5, ERATO Doi 577, expressed	NM_177187|D5Ertd577e|320549|DNA segment, Chr 5, ERATO Doi 577, expressed	BC145804|D5Ertd577e|320549|DNA segment, Chr 5, ERATO Doi 577, expressed
